python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF100-201/ChipExo_models_ZNF100_counts-pos.pattern_0.n_2556-vs-ZNF100-201.alignment counts-znf_b1h_alignment/ZNF100-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF100-201/ChipExo_models_ZNF100_counts-pos.pattern_1.n_837-vs-ZNF100-201.alignment counts-znf_b1h_alignment/ZNF100-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF100-201/ChipExo_models_ZNF100_counts-pos.pattern_2.n_484-vs-ZNF100-201.alignment counts-znf_b1h_alignment/ZNF100-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF101-201/ChipExo_models_ZNF101_counts-pos.pattern_0.n_2456-vs-ZNF101-201.alignment counts-znf_b1h_alignment/ZNF101-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF101-201/neg_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_counts_pattern_0.n_65-vs-ZNF101-201.alignment counts-znf_b1h_alignment/ZNF101-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF101-201/neg_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_counts_pattern_1.n_37-vs-ZNF101-201.alignment counts-znf_b1h_alignment/ZNF101-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF101-201/neg_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_counts_pattern_2.n_28-vs-ZNF101-201.alignment counts-znf_b1h_alignment/ZNF101-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF101-201/pos_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_counts_pattern_0.n_867-vs-ZNF101-201.alignment counts-znf_b1h_alignment/ZNF101-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF101-201/pos_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_counts_pattern_10.n_81-vs-ZNF101-201.alignment counts-znf_b1h_alignment/ZNF101-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF101-201/pos_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_counts_pattern_11.n_80-vs-ZNF101-201.alignment counts-znf_b1h_alignment/ZNF101-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF101-201/pos_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_counts_pattern_12.n_72-vs-ZNF101-201.alignment counts-znf_b1h_alignment/ZNF101-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF101-201/pos_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_counts_pattern_13.n_26-vs-ZNF101-201.alignment counts-znf_b1h_alignment/ZNF101-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF101-201/pos_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_counts_pattern_1.n_796-vs-ZNF101-201.alignment counts-znf_b1h_alignment/ZNF101-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF101-201/pos_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_counts_pattern_2.n_689-vs-ZNF101-201.alignment counts-znf_b1h_alignment/ZNF101-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF101-201/pos_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_counts_pattern_3.n_421-vs-ZNF101-201.alignment counts-znf_b1h_alignment/ZNF101-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF101-201/pos_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_counts_pattern_4.n_123-vs-ZNF101-201.alignment counts-znf_b1h_alignment/ZNF101-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF101-201/pos_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_counts_pattern_5.n_122-vs-ZNF101-201.alignment counts-znf_b1h_alignment/ZNF101-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF101-201/pos_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_counts_pattern_6.n_105-vs-ZNF101-201.alignment counts-znf_b1h_alignment/ZNF101-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF101-201/pos_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_counts_pattern_7.n_104-vs-ZNF101-201.alignment counts-znf_b1h_alignment/ZNF101-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF101-201/pos_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_counts_pattern_8.n_97-vs-ZNF101-201.alignment counts-znf_b1h_alignment/ZNF101-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF101-201/pos_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_counts_pattern_9.n_86-vs-ZNF101-201.alignment counts-znf_b1h_alignment/ZNF101-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF101-203/ChipExo_models_ZNF101_counts-pos.pattern_0.n_2456-vs-ZNF101-203.alignment counts-znf_b1h_alignment/ZNF101-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF101-203/neg_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_counts_pattern_0.n_65-vs-ZNF101-203.alignment counts-znf_b1h_alignment/ZNF101-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF101-203/neg_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_counts_pattern_1.n_37-vs-ZNF101-203.alignment counts-znf_b1h_alignment/ZNF101-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF101-203/neg_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_counts_pattern_2.n_28-vs-ZNF101-203.alignment counts-znf_b1h_alignment/ZNF101-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF101-203/pos_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_counts_pattern_0.n_867-vs-ZNF101-203.alignment counts-znf_b1h_alignment/ZNF101-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF101-203/pos_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_counts_pattern_10.n_81-vs-ZNF101-203.alignment counts-znf_b1h_alignment/ZNF101-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF101-203/pos_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_counts_pattern_11.n_80-vs-ZNF101-203.alignment counts-znf_b1h_alignment/ZNF101-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF101-203/pos_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_counts_pattern_12.n_72-vs-ZNF101-203.alignment counts-znf_b1h_alignment/ZNF101-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF101-203/pos_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_counts_pattern_13.n_26-vs-ZNF101-203.alignment counts-znf_b1h_alignment/ZNF101-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF101-203/pos_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_counts_pattern_1.n_796-vs-ZNF101-203.alignment counts-znf_b1h_alignment/ZNF101-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF101-203/pos_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_counts_pattern_2.n_689-vs-ZNF101-203.alignment counts-znf_b1h_alignment/ZNF101-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF101-203/pos_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_counts_pattern_3.n_421-vs-ZNF101-203.alignment counts-znf_b1h_alignment/ZNF101-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF101-203/pos_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_counts_pattern_4.n_123-vs-ZNF101-203.alignment counts-znf_b1h_alignment/ZNF101-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF101-203/pos_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_counts_pattern_5.n_122-vs-ZNF101-203.alignment counts-znf_b1h_alignment/ZNF101-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF101-203/pos_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_counts_pattern_6.n_105-vs-ZNF101-203.alignment counts-znf_b1h_alignment/ZNF101-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF101-203/pos_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_counts_pattern_7.n_104-vs-ZNF101-203.alignment counts-znf_b1h_alignment/ZNF101-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF101-203/pos_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_counts_pattern_8.n_97-vs-ZNF101-203.alignment counts-znf_b1h_alignment/ZNF101-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF101-203/pos_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_counts_pattern_9.n_86-vs-ZNF101-203.alignment counts-znf_b1h_alignment/ZNF101-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-201/ChipExo_models_ZNF10_counts-pos.pattern_0.n_846-vs-ZNF10-201.alignment counts-znf_b1h_alignment/ZNF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-201/neg_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_0.n_66-vs-ZNF10-201.alignment counts-znf_b1h_alignment/ZNF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-201/neg_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_1.n_41-vs-ZNF10-201.alignment counts-znf_b1h_alignment/ZNF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-201/neg_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_2.n_31-vs-ZNF10-201.alignment counts-znf_b1h_alignment/ZNF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-201/neg_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_3.n_30-vs-ZNF10-201.alignment counts-znf_b1h_alignment/ZNF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-201/neg_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_4.n_28-vs-ZNF10-201.alignment counts-znf_b1h_alignment/ZNF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-201/neg_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_5.n_26-vs-ZNF10-201.alignment counts-znf_b1h_alignment/ZNF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-201/neg_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_6.n_23-vs-ZNF10-201.alignment counts-znf_b1h_alignment/ZNF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-201/neg_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_7.n_21-vs-ZNF10-201.alignment counts-znf_b1h_alignment/ZNF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-201/neg_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_8.n_20-vs-ZNF10-201.alignment counts-znf_b1h_alignment/ZNF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-201/neg_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_9.n_20-vs-ZNF10-201.alignment counts-znf_b1h_alignment/ZNF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-201/pos_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_0.n_251-vs-ZNF10-201.alignment counts-znf_b1h_alignment/ZNF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-201/pos_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_10.n_28-vs-ZNF10-201.alignment counts-znf_b1h_alignment/ZNF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-201/pos_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_11.n_28-vs-ZNF10-201.alignment counts-znf_b1h_alignment/ZNF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-201/pos_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_12.n_28-vs-ZNF10-201.alignment counts-znf_b1h_alignment/ZNF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-201/pos_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_1.n_70-vs-ZNF10-201.alignment counts-znf_b1h_alignment/ZNF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-201/pos_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_2.n_52-vs-ZNF10-201.alignment counts-znf_b1h_alignment/ZNF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-201/pos_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_3.n_48-vs-ZNF10-201.alignment counts-znf_b1h_alignment/ZNF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-201/pos_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_4.n_36-vs-ZNF10-201.alignment counts-znf_b1h_alignment/ZNF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-201/pos_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_5.n_36-vs-ZNF10-201.alignment counts-znf_b1h_alignment/ZNF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-201/pos_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_6.n_35-vs-ZNF10-201.alignment counts-znf_b1h_alignment/ZNF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-201/pos_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_7.n_32-vs-ZNF10-201.alignment counts-znf_b1h_alignment/ZNF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-201/pos_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_8.n_31-vs-ZNF10-201.alignment counts-znf_b1h_alignment/ZNF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-201/pos_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_9.n_31-vs-ZNF10-201.alignment counts-znf_b1h_alignment/ZNF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-201/pos_patterns.ENCSR019WUS_ChIP_ZNF10_HEK293_ENCSR117FSW_counts_pattern_0.n_8238-vs-ZNF10-201.alignment counts-znf_b1h_alignment/ZNF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-201/pos_patterns.ENCSR019WUS_ChIP_ZNF10_HEK293_ENCSR117FSW_counts_pattern_1.n_1410-vs-ZNF10-201.alignment counts-znf_b1h_alignment/ZNF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-201/pos_patterns.ENCSR019WUS_ChIP_ZNF10_HEK293_ENCSR117FSW_counts_pattern_2.n_785-vs-ZNF10-201.alignment counts-znf_b1h_alignment/ZNF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-201/pos_patterns.ENCSR019WUS_ChIP_ZNF10_HEK293_ENCSR117FSW_counts_pattern_3.n_565-vs-ZNF10-201.alignment counts-znf_b1h_alignment/ZNF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-201/pos_patterns.ENCSR019WUS_ChIP_ZNF10_HEK293_ENCSR117FSW_counts_pattern_4.n_529-vs-ZNF10-201.alignment counts-znf_b1h_alignment/ZNF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-201/pos_patterns.ENCSR019WUS_ChIP_ZNF10_HEK293_ENCSR117FSW_counts_pattern_5.n_50-vs-ZNF10-201.alignment counts-znf_b1h_alignment/ZNF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-202/ChipExo_models_ZNF10_counts-pos.pattern_0.n_846-vs-ZNF10-202.alignment counts-znf_b1h_alignment/ZNF10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-202/neg_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_0.n_66-vs-ZNF10-202.alignment counts-znf_b1h_alignment/ZNF10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-202/neg_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_1.n_41-vs-ZNF10-202.alignment counts-znf_b1h_alignment/ZNF10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-202/neg_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_2.n_31-vs-ZNF10-202.alignment counts-znf_b1h_alignment/ZNF10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-202/neg_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_3.n_30-vs-ZNF10-202.alignment counts-znf_b1h_alignment/ZNF10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-202/neg_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_4.n_28-vs-ZNF10-202.alignment counts-znf_b1h_alignment/ZNF10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-202/neg_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_5.n_26-vs-ZNF10-202.alignment counts-znf_b1h_alignment/ZNF10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-202/neg_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_6.n_23-vs-ZNF10-202.alignment counts-znf_b1h_alignment/ZNF10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-202/neg_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_7.n_21-vs-ZNF10-202.alignment counts-znf_b1h_alignment/ZNF10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-202/neg_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_8.n_20-vs-ZNF10-202.alignment counts-znf_b1h_alignment/ZNF10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-202/neg_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_9.n_20-vs-ZNF10-202.alignment counts-znf_b1h_alignment/ZNF10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-202/pos_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_0.n_251-vs-ZNF10-202.alignment counts-znf_b1h_alignment/ZNF10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-202/pos_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_10.n_28-vs-ZNF10-202.alignment counts-znf_b1h_alignment/ZNF10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-202/pos_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_11.n_28-vs-ZNF10-202.alignment counts-znf_b1h_alignment/ZNF10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-202/pos_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_12.n_28-vs-ZNF10-202.alignment counts-znf_b1h_alignment/ZNF10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-202/pos_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_1.n_70-vs-ZNF10-202.alignment counts-znf_b1h_alignment/ZNF10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-202/pos_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_2.n_52-vs-ZNF10-202.alignment counts-znf_b1h_alignment/ZNF10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-202/pos_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_3.n_48-vs-ZNF10-202.alignment counts-znf_b1h_alignment/ZNF10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-202/pos_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_4.n_36-vs-ZNF10-202.alignment counts-znf_b1h_alignment/ZNF10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-202/pos_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_5.n_36-vs-ZNF10-202.alignment counts-znf_b1h_alignment/ZNF10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-202/pos_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_6.n_35-vs-ZNF10-202.alignment counts-znf_b1h_alignment/ZNF10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-202/pos_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_7.n_32-vs-ZNF10-202.alignment counts-znf_b1h_alignment/ZNF10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-202/pos_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_8.n_31-vs-ZNF10-202.alignment counts-znf_b1h_alignment/ZNF10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-202/pos_patterns.ENCSR009LIA_ChIP_ZNF10_HepG2_ENCSR677PFL_counts_pattern_9.n_31-vs-ZNF10-202.alignment counts-znf_b1h_alignment/ZNF10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-202/pos_patterns.ENCSR019WUS_ChIP_ZNF10_HEK293_ENCSR117FSW_counts_pattern_0.n_8238-vs-ZNF10-202.alignment counts-znf_b1h_alignment/ZNF10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-202/pos_patterns.ENCSR019WUS_ChIP_ZNF10_HEK293_ENCSR117FSW_counts_pattern_1.n_1410-vs-ZNF10-202.alignment counts-znf_b1h_alignment/ZNF10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-202/pos_patterns.ENCSR019WUS_ChIP_ZNF10_HEK293_ENCSR117FSW_counts_pattern_2.n_785-vs-ZNF10-202.alignment counts-znf_b1h_alignment/ZNF10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-202/pos_patterns.ENCSR019WUS_ChIP_ZNF10_HEK293_ENCSR117FSW_counts_pattern_3.n_565-vs-ZNF10-202.alignment counts-znf_b1h_alignment/ZNF10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-202/pos_patterns.ENCSR019WUS_ChIP_ZNF10_HEK293_ENCSR117FSW_counts_pattern_4.n_529-vs-ZNF10-202.alignment counts-znf_b1h_alignment/ZNF10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF10-202/pos_patterns.ENCSR019WUS_ChIP_ZNF10_HEK293_ENCSR117FSW_counts_pattern_5.n_50-vs-ZNF10-202.alignment counts-znf_b1h_alignment/ZNF10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF112-201/pos_patterns.ENCSR751PNN_ChIP_ZNF112_HEK293_ENCSR680TYT_counts_pattern_0.n_510-vs-ZNF112-201.alignment counts-znf_b1h_alignment/ZNF112-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF112-201/pos_patterns.ENCSR751PNN_ChIP_ZNF112_HEK293_ENCSR680TYT_counts_pattern_1.n_350-vs-ZNF112-201.alignment counts-znf_b1h_alignment/ZNF112-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF112-201/pos_patterns.ENCSR751PNN_ChIP_ZNF112_HEK293_ENCSR680TYT_counts_pattern_2.n_259-vs-ZNF112-201.alignment counts-znf_b1h_alignment/ZNF112-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF114-201/ChipExo_models_ZNF114_counts-pos.pattern_0.n_307-vs-ZNF114-201.alignment counts-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF114-201/ChipExo_models_ZNF114_counts-pos.pattern_1.n_30-vs-ZNF114-201.alignment counts-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF114-201/neg_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_counts_pattern_0.n_572-vs-ZNF114-201.alignment counts-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF114-201/neg_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_counts_pattern_1.n_200-vs-ZNF114-201.alignment counts-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF114-201/neg_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_counts_pattern_2.n_162-vs-ZNF114-201.alignment counts-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF114-201/neg_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_counts_pattern_3.n_122-vs-ZNF114-201.alignment counts-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF114-201/neg_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_counts_pattern_4.n_94-vs-ZNF114-201.alignment counts-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF114-201/neg_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_counts_pattern_5.n_56-vs-ZNF114-201.alignment counts-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF114-201/neg_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_counts_pattern_6.n_54-vs-ZNF114-201.alignment counts-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF114-201/neg_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_counts_pattern_7.n_33-vs-ZNF114-201.alignment counts-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_counts_pattern_0.n_666-vs-ZNF114-201.alignment counts-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_counts_pattern_10.n_70-vs-ZNF114-201.alignment counts-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_counts_pattern_11.n_69-vs-ZNF114-201.alignment counts-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_counts_pattern_12.n_66-vs-ZNF114-201.alignment counts-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_counts_pattern_13.n_56-vs-ZNF114-201.alignment counts-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_counts_pattern_14.n_54-vs-ZNF114-201.alignment counts-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_counts_pattern_15.n_52-vs-ZNF114-201.alignment counts-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_counts_pattern_16.n_51-vs-ZNF114-201.alignment counts-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_counts_pattern_17.n_48-vs-ZNF114-201.alignment counts-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_counts_pattern_18.n_46-vs-ZNF114-201.alignment counts-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_counts_pattern_19.n_32-vs-ZNF114-201.alignment counts-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_counts_pattern_1.n_127-vs-ZNF114-201.alignment counts-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_counts_pattern_20.n_32-vs-ZNF114-201.alignment counts-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_counts_pattern_21.n_29-vs-ZNF114-201.alignment counts-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_counts_pattern_22.n_29-vs-ZNF114-201.alignment counts-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_counts_pattern_23.n_25-vs-ZNF114-201.alignment counts-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_counts_pattern_2.n_100-vs-ZNF114-201.alignment counts-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_counts_pattern_3.n_96-vs-ZNF114-201.alignment counts-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_counts_pattern_4.n_92-vs-ZNF114-201.alignment counts-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_counts_pattern_5.n_86-vs-ZNF114-201.alignment counts-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_counts_pattern_6.n_84-vs-ZNF114-201.alignment counts-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_counts_pattern_7.n_82-vs-ZNF114-201.alignment counts-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_counts_pattern_8.n_81-vs-ZNF114-201.alignment counts-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_counts_pattern_9.n_80-vs-ZNF114-201.alignment counts-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR985MYI_ChIP_ZNF114_HEK293_ENCSR862ZYU_counts_pattern_0.n_344-vs-ZNF114-201.alignment counts-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR985MYI_ChIP_ZNF114_HEK293_ENCSR862ZYU_counts_pattern_1.n_55-vs-ZNF114-201.alignment counts-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR985MYI_ChIP_ZNF114_HEK293_ENCSR862ZYU_counts_pattern_2.n_41-vs-ZNF114-201.alignment counts-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR985MYI_ChIP_ZNF114_HEK293_ENCSR862ZYU_counts_pattern_3.n_37-vs-ZNF114-201.alignment counts-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR985MYI_ChIP_ZNF114_HEK293_ENCSR862ZYU_counts_pattern_4.n_35-vs-ZNF114-201.alignment counts-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR985MYI_ChIP_ZNF114_HEK293_ENCSR862ZYU_counts_pattern_5.n_27-vs-ZNF114-201.alignment counts-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR985MYI_ChIP_ZNF114_HEK293_ENCSR862ZYU_counts_pattern_6.n_23-vs-ZNF114-201.alignment counts-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR985MYI_ChIP_ZNF114_HEK293_ENCSR862ZYU_counts_pattern_7.n_20-vs-ZNF114-201.alignment counts-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/Hughes_GR_models_ZNF121_counts-pos.pattern_0.n_16982-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/Hughes_GR_models_ZNF121_counts-pos.pattern_1.n_871-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/Hughes_GR_models_ZNF121_counts-pos.pattern_2.n_375-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/Hughes_GR_models_ZNF121_counts-pos.pattern_3.n_234-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/Hughes_GR_models_ZNF121_counts-pos.pattern_4.n_69-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/Hughes_GR_models_ZNF121_counts-pos.pattern_5.n_34-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_counts_pattern_0.n_2136-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_counts_pattern_10.n_92-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_counts_pattern_11.n_68-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_counts_pattern_12.n_37-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_counts_pattern_1.n_1458-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_counts_pattern_2.n_990-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_counts_pattern_3.n_899-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_counts_pattern_4.n_391-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_counts_pattern_5.n_377-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_counts_pattern_6.n_240-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_counts_pattern_7.n_194-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_counts_pattern_8.n_130-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_counts_pattern_9.n_93-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR224QDY_ChIP_ZNF121_HEK293_ENCSR370XXE_counts_pattern_0.n_47-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR224QDY_ChIP_ZNF121_HEK293_ENCSR370XXE_counts_pattern_1.n_32-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR224QDY_ChIP_ZNF121_HEK293_ENCSR370XXE_counts_pattern_2.n_29-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR799URB_ChIP_ZNF121_K562_ENCSR391MTA_counts_pattern_0.n_27-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR799URB_ChIP_ZNF121_K562_ENCSR391MTA_counts_pattern_1.n_23-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR799URB_ChIP_ZNF121_K562_ENCSR391MTA_counts_pattern_2.n_20-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_counts_pattern_0.n_105-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_counts_pattern_1.n_90-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_counts_pattern_2.n_34-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_counts_pattern_3.n_34-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_counts_pattern_4.n_26-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_counts_pattern_5.n_23-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_counts_pattern_6.n_23-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_counts_pattern_7.n_21-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_counts_pattern_8.n_20-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_counts_pattern_0.n_17319-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_counts_pattern_10.n_22-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_counts_pattern_1.n_1438-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_counts_pattern_2.n_600-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_counts_pattern_3.n_501-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_counts_pattern_4.n_395-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_counts_pattern_5.n_371-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_counts_pattern_6.n_334-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_counts_pattern_7.n_103-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_counts_pattern_8.n_58-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_counts_pattern_9.n_37-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR224QDY_ChIP_ZNF121_HEK293_ENCSR370XXE_counts_pattern_0.n_15896-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR224QDY_ChIP_ZNF121_HEK293_ENCSR370XXE_counts_pattern_1.n_683-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR224QDY_ChIP_ZNF121_HEK293_ENCSR370XXE_counts_pattern_2.n_595-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR224QDY_ChIP_ZNF121_HEK293_ENCSR370XXE_counts_pattern_3.n_235-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR224QDY_ChIP_ZNF121_HEK293_ENCSR370XXE_counts_pattern_4.n_78-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR224QDY_ChIP_ZNF121_HEK293_ENCSR370XXE_counts_pattern_5.n_73-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR224QDY_ChIP_ZNF121_HEK293_ENCSR370XXE_counts_pattern_6.n_32-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR799URB_ChIP_ZNF121_K562_ENCSR391MTA_counts_pattern_0.n_15602-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR799URB_ChIP_ZNF121_K562_ENCSR391MTA_counts_pattern_10.n_51-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR799URB_ChIP_ZNF121_K562_ENCSR391MTA_counts_pattern_11.n_50-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR799URB_ChIP_ZNF121_K562_ENCSR391MTA_counts_pattern_12.n_48-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR799URB_ChIP_ZNF121_K562_ENCSR391MTA_counts_pattern_1.n_251-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR799URB_ChIP_ZNF121_K562_ENCSR391MTA_counts_pattern_2.n_236-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR799URB_ChIP_ZNF121_K562_ENCSR391MTA_counts_pattern_3.n_215-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR799URB_ChIP_ZNF121_K562_ENCSR391MTA_counts_pattern_4.n_172-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR799URB_ChIP_ZNF121_K562_ENCSR391MTA_counts_pattern_5.n_149-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR799URB_ChIP_ZNF121_K562_ENCSR391MTA_counts_pattern_6.n_129-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR799URB_ChIP_ZNF121_K562_ENCSR391MTA_counts_pattern_7.n_95-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR799URB_ChIP_ZNF121_K562_ENCSR391MTA_counts_pattern_8.n_92-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR799URB_ChIP_ZNF121_K562_ENCSR391MTA_counts_pattern_9.n_78-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_counts_pattern_0.n_16750-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_counts_pattern_10.n_83-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_counts_pattern_11.n_67-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_counts_pattern_12.n_32-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_counts_pattern_1.n_1156-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_counts_pattern_2.n_1009-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_counts_pattern_3.n_325-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_counts_pattern_4.n_309-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_counts_pattern_5.n_269-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_counts_pattern_6.n_267-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_counts_pattern_7.n_204-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_counts_pattern_8.n_126-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_counts_pattern_9.n_100-vs-ZNF121-201.alignment counts-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF12-201/ChipExo_models_ZNF12_counts-pos.pattern_0.n_224-vs-ZNF12-201.alignment counts-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF12-201/ChipExo_models_ZNF12_counts-pos.pattern_1.n_194-vs-ZNF12-201.alignment counts-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF12-201/ChipExo_models_ZNF12_counts-pos.pattern_2.n_168-vs-ZNF12-201.alignment counts-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF12-201/ChipExo_models_ZNF12_counts-pos.pattern_3.n_99-vs-ZNF12-201.alignment counts-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF12-201/ChipExo_models_ZNF12_counts-pos.pattern_4.n_26-vs-ZNF12-201.alignment counts-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF12-201/neg_patterns.ENCSR711KBM_ChIP_ZNF12_HepG2_ENCSR835UBF_counts_pattern_0.n_45-vs-ZNF12-201.alignment counts-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF12-201/neg_patterns.ENCSR711KBM_ChIP_ZNF12_HepG2_ENCSR835UBF_counts_pattern_1.n_28-vs-ZNF12-201.alignment counts-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF12-201/neg_patterns.ENCSR711KBM_ChIP_ZNF12_HepG2_ENCSR835UBF_counts_pattern_2.n_24-vs-ZNF12-201.alignment counts-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF12-201/neg_patterns.ENCSR711KBM_ChIP_ZNF12_HepG2_ENCSR835UBF_counts_pattern_3.n_24-vs-ZNF12-201.alignment counts-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF12-201/neg_patterns.ENCSR711KBM_ChIP_ZNF12_HepG2_ENCSR835UBF_counts_pattern_4.n_22-vs-ZNF12-201.alignment counts-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR041YBR_ChIP_ZNF12_K562_ENCSR035AXW_counts_pattern_0.n_1943-vs-ZNF12-201.alignment counts-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR041YBR_ChIP_ZNF12_K562_ENCSR035AXW_counts_pattern_1.n_116-vs-ZNF12-201.alignment counts-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR041YBR_ChIP_ZNF12_K562_ENCSR035AXW_counts_pattern_2.n_103-vs-ZNF12-201.alignment counts-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR041YBR_ChIP_ZNF12_K562_ENCSR035AXW_counts_pattern_3.n_98-vs-ZNF12-201.alignment counts-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR041YBR_ChIP_ZNF12_K562_ENCSR035AXW_counts_pattern_4.n_96-vs-ZNF12-201.alignment counts-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR041YBR_ChIP_ZNF12_K562_ENCSR035AXW_counts_pattern_5.n_68-vs-ZNF12-201.alignment counts-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR041YBR_ChIP_ZNF12_K562_ENCSR035AXW_counts_pattern_6.n_23-vs-ZNF12-201.alignment counts-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR711KBM_ChIP_ZNF12_HepG2_ENCSR835UBF_counts_pattern_0.n_4001-vs-ZNF12-201.alignment counts-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR711KBM_ChIP_ZNF12_HepG2_ENCSR835UBF_counts_pattern_10.n_153-vs-ZNF12-201.alignment counts-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR711KBM_ChIP_ZNF12_HepG2_ENCSR835UBF_counts_pattern_11.n_144-vs-ZNF12-201.alignment counts-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR711KBM_ChIP_ZNF12_HepG2_ENCSR835UBF_counts_pattern_12.n_106-vs-ZNF12-201.alignment counts-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR711KBM_ChIP_ZNF12_HepG2_ENCSR835UBF_counts_pattern_13.n_90-vs-ZNF12-201.alignment counts-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR711KBM_ChIP_ZNF12_HepG2_ENCSR835UBF_counts_pattern_14.n_36-vs-ZNF12-201.alignment counts-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR711KBM_ChIP_ZNF12_HepG2_ENCSR835UBF_counts_pattern_15.n_29-vs-ZNF12-201.alignment counts-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR711KBM_ChIP_ZNF12_HepG2_ENCSR835UBF_counts_pattern_1.n_3053-vs-ZNF12-201.alignment counts-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR711KBM_ChIP_ZNF12_HepG2_ENCSR835UBF_counts_pattern_2.n_1640-vs-ZNF12-201.alignment counts-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR711KBM_ChIP_ZNF12_HepG2_ENCSR835UBF_counts_pattern_3.n_1239-vs-ZNF12-201.alignment counts-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR711KBM_ChIP_ZNF12_HepG2_ENCSR835UBF_counts_pattern_4.n_832-vs-ZNF12-201.alignment counts-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR711KBM_ChIP_ZNF12_HepG2_ENCSR835UBF_counts_pattern_5.n_517-vs-ZNF12-201.alignment counts-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR711KBM_ChIP_ZNF12_HepG2_ENCSR835UBF_counts_pattern_6.n_381-vs-ZNF12-201.alignment counts-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR711KBM_ChIP_ZNF12_HepG2_ENCSR835UBF_counts_pattern_7.n_379-vs-ZNF12-201.alignment counts-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR711KBM_ChIP_ZNF12_HepG2_ENCSR835UBF_counts_pattern_8.n_316-vs-ZNF12-201.alignment counts-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR711KBM_ChIP_ZNF12_HepG2_ENCSR835UBF_counts_pattern_9.n_225-vs-ZNF12-201.alignment counts-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-201/ChipExo_models_ZNF124_counts-pos.pattern_0.n_468-vs-ZNF124-201.alignment counts-znf_b1h_alignment/ZNF124-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-201/ChipExo_models_ZNF124_counts-pos.pattern_1.n_112-vs-ZNF124-201.alignment counts-znf_b1h_alignment/ZNF124-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-201/ChipExo_models_ZNF124_counts-pos.pattern_2.n_98-vs-ZNF124-201.alignment counts-znf_b1h_alignment/ZNF124-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-201/pos_patterns.ENCSR124YFA_ChIP_ZNF124_K562_ENCSR532VCB_counts_pattern_0.n_106-vs-ZNF124-201.alignment counts-znf_b1h_alignment/ZNF124-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-201/pos_patterns.ENCSR124YFA_ChIP_ZNF124_K562_ENCSR532VCB_counts_pattern_1.n_84-vs-ZNF124-201.alignment counts-znf_b1h_alignment/ZNF124-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-201/pos_patterns.ENCSR124YFA_ChIP_ZNF124_K562_ENCSR532VCB_counts_pattern_2.n_81-vs-ZNF124-201.alignment counts-znf_b1h_alignment/ZNF124-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-201/pos_patterns.ENCSR124YFA_ChIP_ZNF124_K562_ENCSR532VCB_counts_pattern_3.n_67-vs-ZNF124-201.alignment counts-znf_b1h_alignment/ZNF124-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-201/pos_patterns.ENCSR124YFA_ChIP_ZNF124_K562_ENCSR532VCB_counts_pattern_4.n_38-vs-ZNF124-201.alignment counts-znf_b1h_alignment/ZNF124-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-201/pos_patterns.ENCSR124YFA_ChIP_ZNF124_K562_ENCSR532VCB_counts_pattern_5.n_34-vs-ZNF124-201.alignment counts-znf_b1h_alignment/ZNF124-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-201/pos_patterns.ENCSR124YFA_ChIP_ZNF124_K562_ENCSR532VCB_counts_pattern_6.n_30-vs-ZNF124-201.alignment counts-znf_b1h_alignment/ZNF124-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-201/pos_patterns.ENCSR124YFA_ChIP_ZNF124_K562_ENCSR532VCB_counts_pattern_7.n_22-vs-ZNF124-201.alignment counts-znf_b1h_alignment/ZNF124-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-201/pos_patterns.ENCSR124YFA_ChIP_ZNF124_K562_ENCSR532VCB_counts_pattern_8.n_22-vs-ZNF124-201.alignment counts-znf_b1h_alignment/ZNF124-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-201/pos_patterns.ENCSR124YFA_ChIP_ZNF124_K562_ENCSR532VCB_counts_pattern_9.n_21-vs-ZNF124-201.alignment counts-znf_b1h_alignment/ZNF124-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-201/pos_patterns.ENCSR357YPP_ChIP_ZNF124_HepG2_ENCSR242SMM_counts_pattern_0.n_2911-vs-ZNF124-201.alignment counts-znf_b1h_alignment/ZNF124-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-201/pos_patterns.ENCSR357YPP_ChIP_ZNF124_HepG2_ENCSR242SMM_counts_pattern_10.n_128-vs-ZNF124-201.alignment counts-znf_b1h_alignment/ZNF124-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-201/pos_patterns.ENCSR357YPP_ChIP_ZNF124_HepG2_ENCSR242SMM_counts_pattern_11.n_44-vs-ZNF124-201.alignment counts-znf_b1h_alignment/ZNF124-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-201/pos_patterns.ENCSR357YPP_ChIP_ZNF124_HepG2_ENCSR242SMM_counts_pattern_12.n_32-vs-ZNF124-201.alignment counts-znf_b1h_alignment/ZNF124-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-201/pos_patterns.ENCSR357YPP_ChIP_ZNF124_HepG2_ENCSR242SMM_counts_pattern_13.n_32-vs-ZNF124-201.alignment counts-znf_b1h_alignment/ZNF124-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-201/pos_patterns.ENCSR357YPP_ChIP_ZNF124_HepG2_ENCSR242SMM_counts_pattern_1.n_2356-vs-ZNF124-201.alignment counts-znf_b1h_alignment/ZNF124-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-201/pos_patterns.ENCSR357YPP_ChIP_ZNF124_HepG2_ENCSR242SMM_counts_pattern_2.n_1700-vs-ZNF124-201.alignment counts-znf_b1h_alignment/ZNF124-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-201/pos_patterns.ENCSR357YPP_ChIP_ZNF124_HepG2_ENCSR242SMM_counts_pattern_3.n_1430-vs-ZNF124-201.alignment counts-znf_b1h_alignment/ZNF124-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-201/pos_patterns.ENCSR357YPP_ChIP_ZNF124_HepG2_ENCSR242SMM_counts_pattern_4.n_733-vs-ZNF124-201.alignment counts-znf_b1h_alignment/ZNF124-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-201/pos_patterns.ENCSR357YPP_ChIP_ZNF124_HepG2_ENCSR242SMM_counts_pattern_5.n_334-vs-ZNF124-201.alignment counts-znf_b1h_alignment/ZNF124-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-201/pos_patterns.ENCSR357YPP_ChIP_ZNF124_HepG2_ENCSR242SMM_counts_pattern_6.n_307-vs-ZNF124-201.alignment counts-znf_b1h_alignment/ZNF124-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-201/pos_patterns.ENCSR357YPP_ChIP_ZNF124_HepG2_ENCSR242SMM_counts_pattern_7.n_290-vs-ZNF124-201.alignment counts-znf_b1h_alignment/ZNF124-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-201/pos_patterns.ENCSR357YPP_ChIP_ZNF124_HepG2_ENCSR242SMM_counts_pattern_8.n_191-vs-ZNF124-201.alignment counts-znf_b1h_alignment/ZNF124-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-201/pos_patterns.ENCSR357YPP_ChIP_ZNF124_HepG2_ENCSR242SMM_counts_pattern_9.n_182-vs-ZNF124-201.alignment counts-znf_b1h_alignment/ZNF124-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-206/ChipExo_models_ZNF124_counts-pos.pattern_0.n_468-vs-ZNF124-206.alignment counts-znf_b1h_alignment/ZNF124-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-206/ChipExo_models_ZNF124_counts-pos.pattern_1.n_112-vs-ZNF124-206.alignment counts-znf_b1h_alignment/ZNF124-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-206/ChipExo_models_ZNF124_counts-pos.pattern_2.n_98-vs-ZNF124-206.alignment counts-znf_b1h_alignment/ZNF124-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-206/pos_patterns.ENCSR124YFA_ChIP_ZNF124_K562_ENCSR532VCB_counts_pattern_0.n_106-vs-ZNF124-206.alignment counts-znf_b1h_alignment/ZNF124-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-206/pos_patterns.ENCSR124YFA_ChIP_ZNF124_K562_ENCSR532VCB_counts_pattern_1.n_84-vs-ZNF124-206.alignment counts-znf_b1h_alignment/ZNF124-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-206/pos_patterns.ENCSR124YFA_ChIP_ZNF124_K562_ENCSR532VCB_counts_pattern_2.n_81-vs-ZNF124-206.alignment counts-znf_b1h_alignment/ZNF124-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-206/pos_patterns.ENCSR124YFA_ChIP_ZNF124_K562_ENCSR532VCB_counts_pattern_3.n_67-vs-ZNF124-206.alignment counts-znf_b1h_alignment/ZNF124-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-206/pos_patterns.ENCSR124YFA_ChIP_ZNF124_K562_ENCSR532VCB_counts_pattern_4.n_38-vs-ZNF124-206.alignment counts-znf_b1h_alignment/ZNF124-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-206/pos_patterns.ENCSR124YFA_ChIP_ZNF124_K562_ENCSR532VCB_counts_pattern_5.n_34-vs-ZNF124-206.alignment counts-znf_b1h_alignment/ZNF124-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-206/pos_patterns.ENCSR124YFA_ChIP_ZNF124_K562_ENCSR532VCB_counts_pattern_6.n_30-vs-ZNF124-206.alignment counts-znf_b1h_alignment/ZNF124-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-206/pos_patterns.ENCSR124YFA_ChIP_ZNF124_K562_ENCSR532VCB_counts_pattern_7.n_22-vs-ZNF124-206.alignment counts-znf_b1h_alignment/ZNF124-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-206/pos_patterns.ENCSR124YFA_ChIP_ZNF124_K562_ENCSR532VCB_counts_pattern_8.n_22-vs-ZNF124-206.alignment counts-znf_b1h_alignment/ZNF124-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-206/pos_patterns.ENCSR124YFA_ChIP_ZNF124_K562_ENCSR532VCB_counts_pattern_9.n_21-vs-ZNF124-206.alignment counts-znf_b1h_alignment/ZNF124-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-206/pos_patterns.ENCSR357YPP_ChIP_ZNF124_HepG2_ENCSR242SMM_counts_pattern_0.n_2911-vs-ZNF124-206.alignment counts-znf_b1h_alignment/ZNF124-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-206/pos_patterns.ENCSR357YPP_ChIP_ZNF124_HepG2_ENCSR242SMM_counts_pattern_10.n_128-vs-ZNF124-206.alignment counts-znf_b1h_alignment/ZNF124-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-206/pos_patterns.ENCSR357YPP_ChIP_ZNF124_HepG2_ENCSR242SMM_counts_pattern_11.n_44-vs-ZNF124-206.alignment counts-znf_b1h_alignment/ZNF124-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-206/pos_patterns.ENCSR357YPP_ChIP_ZNF124_HepG2_ENCSR242SMM_counts_pattern_12.n_32-vs-ZNF124-206.alignment counts-znf_b1h_alignment/ZNF124-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-206/pos_patterns.ENCSR357YPP_ChIP_ZNF124_HepG2_ENCSR242SMM_counts_pattern_13.n_32-vs-ZNF124-206.alignment counts-znf_b1h_alignment/ZNF124-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-206/pos_patterns.ENCSR357YPP_ChIP_ZNF124_HepG2_ENCSR242SMM_counts_pattern_1.n_2356-vs-ZNF124-206.alignment counts-znf_b1h_alignment/ZNF124-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-206/pos_patterns.ENCSR357YPP_ChIP_ZNF124_HepG2_ENCSR242SMM_counts_pattern_2.n_1700-vs-ZNF124-206.alignment counts-znf_b1h_alignment/ZNF124-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-206/pos_patterns.ENCSR357YPP_ChIP_ZNF124_HepG2_ENCSR242SMM_counts_pattern_3.n_1430-vs-ZNF124-206.alignment counts-znf_b1h_alignment/ZNF124-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-206/pos_patterns.ENCSR357YPP_ChIP_ZNF124_HepG2_ENCSR242SMM_counts_pattern_4.n_733-vs-ZNF124-206.alignment counts-znf_b1h_alignment/ZNF124-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-206/pos_patterns.ENCSR357YPP_ChIP_ZNF124_HepG2_ENCSR242SMM_counts_pattern_5.n_334-vs-ZNF124-206.alignment counts-znf_b1h_alignment/ZNF124-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-206/pos_patterns.ENCSR357YPP_ChIP_ZNF124_HepG2_ENCSR242SMM_counts_pattern_6.n_307-vs-ZNF124-206.alignment counts-znf_b1h_alignment/ZNF124-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-206/pos_patterns.ENCSR357YPP_ChIP_ZNF124_HepG2_ENCSR242SMM_counts_pattern_7.n_290-vs-ZNF124-206.alignment counts-znf_b1h_alignment/ZNF124-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-206/pos_patterns.ENCSR357YPP_ChIP_ZNF124_HepG2_ENCSR242SMM_counts_pattern_8.n_191-vs-ZNF124-206.alignment counts-znf_b1h_alignment/ZNF124-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF124-206/pos_patterns.ENCSR357YPP_ChIP_ZNF124_HepG2_ENCSR242SMM_counts_pattern_9.n_182-vs-ZNF124-206.alignment counts-znf_b1h_alignment/ZNF124-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF132-201/ChipExo_models_ZNF132_counts-pos.pattern_0.n_311-vs-ZNF132-201.alignment counts-znf_b1h_alignment/ZNF132-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF132-201/ChipExo_models_ZNF132_counts-pos.pattern_1.n_141-vs-ZNF132-201.alignment counts-znf_b1h_alignment/ZNF132-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF132-201/pos_patterns.ENCSR138RCE_ChIP_ZNF132_HEK293_ENCSR587YFQ_counts_pattern_0.n_24-vs-ZNF132-201.alignment counts-znf_b1h_alignment/ZNF132-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF132-201/pos_patterns.ENCSR138RCE_ChIP_ZNF132_HEK293_ENCSR587YFQ_counts_pattern_1.n_22-vs-ZNF132-201.alignment counts-znf_b1h_alignment/ZNF132-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF132-201/pos_patterns.ENCSR138RCE_ChIP_ZNF132_HEK293_ENCSR587YFQ_counts_pattern_2.n_21-vs-ZNF132-201.alignment counts-znf_b1h_alignment/ZNF132-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF133-206/ChipExo_models_ZNF133_counts-pos.pattern_0.n_5073-vs-ZNF133-206.alignment counts-znf_b1h_alignment/ZNF133-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF133-206/ChipExo_models_ZNF133_counts-pos.pattern_1.n_3898-vs-ZNF133-206.alignment counts-znf_b1h_alignment/ZNF133-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF133-206/ChipExo_models_ZNF133_counts-pos.pattern_2.n_35-vs-ZNF133-206.alignment counts-znf_b1h_alignment/ZNF133-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF133-206/neg_patterns.ENCSR283MWQ_ChIP_ZNF133_HEK293_ENCSR039OVW_counts_pattern_0.n_32-vs-ZNF133-206.alignment counts-znf_b1h_alignment/ZNF133-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF133-206/pos_patterns.ENCSR283MWQ_ChIP_ZNF133_HEK293_ENCSR039OVW_counts_pattern_0.n_2188-vs-ZNF133-206.alignment counts-znf_b1h_alignment/ZNF133-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF133-206/pos_patterns.ENCSR283MWQ_ChIP_ZNF133_HEK293_ENCSR039OVW_counts_pattern_1.n_1390-vs-ZNF133-206.alignment counts-znf_b1h_alignment/ZNF133-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF133-206/pos_patterns.ENCSR283MWQ_ChIP_ZNF133_HEK293_ENCSR039OVW_counts_pattern_2.n_1371-vs-ZNF133-206.alignment counts-znf_b1h_alignment/ZNF133-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF133-206/pos_patterns.ENCSR283MWQ_ChIP_ZNF133_HEK293_ENCSR039OVW_counts_pattern_3.n_1019-vs-ZNF133-206.alignment counts-znf_b1h_alignment/ZNF133-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF133-206/pos_patterns.ENCSR283MWQ_ChIP_ZNF133_HEK293_ENCSR039OVW_counts_pattern_4.n_612-vs-ZNF133-206.alignment counts-znf_b1h_alignment/ZNF133-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF133-206/pos_patterns.ENCSR283MWQ_ChIP_ZNF133_HEK293_ENCSR039OVW_counts_pattern_5.n_194-vs-ZNF133-206.alignment counts-znf_b1h_alignment/ZNF133-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF133-206/pos_patterns.ENCSR283MWQ_ChIP_ZNF133_HEK293_ENCSR039OVW_counts_pattern_6.n_190-vs-ZNF133-206.alignment counts-znf_b1h_alignment/ZNF133-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF133-206/pos_patterns.ENCSR283MWQ_ChIP_ZNF133_HEK293_ENCSR039OVW_counts_pattern_7.n_20-vs-ZNF133-206.alignment counts-znf_b1h_alignment/ZNF133-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF133-206/pos_patterns.ENCSR619UPN_ChIP_ZNF133_K562_ENCSR628AQS_counts_pattern_0.n_418-vs-ZNF133-206.alignment counts-znf_b1h_alignment/ZNF133-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF133-206/pos_patterns.ENCSR619UPN_ChIP_ZNF133_K562_ENCSR628AQS_counts_pattern_1.n_33-vs-ZNF133-206.alignment counts-znf_b1h_alignment/ZNF133-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF133-206/pos_patterns.ENCSR619UPN_ChIP_ZNF133_K562_ENCSR628AQS_counts_pattern_2.n_33-vs-ZNF133-206.alignment counts-znf_b1h_alignment/ZNF133-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF133-206/pos_patterns.ENCSR619UPN_ChIP_ZNF133_K562_ENCSR628AQS_counts_pattern_3.n_29-vs-ZNF133-206.alignment counts-znf_b1h_alignment/ZNF133-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF134-201/Hughes_GR_models_ZNF134_counts-pos.pattern_0.n_3615-vs-ZNF134-201.alignment counts-znf_b1h_alignment/ZNF134-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF134-201/neg_patterns.ENCSR553NTC_ChIP_ZNF134_K562_ENCSR725JVK_counts_pattern_0.n_28-vs-ZNF134-201.alignment counts-znf_b1h_alignment/ZNF134-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF134-201/neg_patterns.ENCSR553NTC_ChIP_ZNF134_K562_ENCSR725JVK_counts_pattern_1.n_28-vs-ZNF134-201.alignment counts-znf_b1h_alignment/ZNF134-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF134-201/neg_patterns.ENCSR553NTC_ChIP_ZNF134_K562_ENCSR725JVK_counts_pattern_2.n_27-vs-ZNF134-201.alignment counts-znf_b1h_alignment/ZNF134-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF134-201/pos_patterns.ENCSR553NTC_ChIP_ZNF134_K562_ENCSR725JVK_counts_pattern_0.n_4173-vs-ZNF134-201.alignment counts-znf_b1h_alignment/ZNF134-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF134-201/pos_patterns.ENCSR553NTC_ChIP_ZNF134_K562_ENCSR725JVK_counts_pattern_1.n_763-vs-ZNF134-201.alignment counts-znf_b1h_alignment/ZNF134-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF134-201/pos_patterns.ENCSR553NTC_ChIP_ZNF134_K562_ENCSR725JVK_counts_pattern_2.n_56-vs-ZNF134-201.alignment counts-znf_b1h_alignment/ZNF134-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF134-201/pos_patterns.ENCSR553NTC_ChIP_ZNF134_K562_ENCSR725JVK_counts_pattern_3.n_43-vs-ZNF134-201.alignment counts-znf_b1h_alignment/ZNF134-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF134-201/pos_patterns.ENCSR553NTC_ChIP_ZNF134_K562_ENCSR725JVK_counts_pattern_4.n_30-vs-ZNF134-201.alignment counts-znf_b1h_alignment/ZNF134-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF134-201/pos_patterns.ENCSR553NTC_ChIP_ZNF134_K562_ENCSR725JVK_counts_pattern_5.n_25-vs-ZNF134-201.alignment counts-znf_b1h_alignment/ZNF134-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF134-201/pos_patterns.ENCSR553NTC_ChIP_ZNF134_K562_ENCSR725JVK_counts_pattern_6.n_22-vs-ZNF134-201.alignment counts-znf_b1h_alignment/ZNF134-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF135-201/ChipExo_models_ZNF135_counts-pos.pattern_0.n_927-vs-ZNF135-201.alignment counts-znf_b1h_alignment/ZNF135-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF135-201/ChipExo_models_ZNF135_counts-pos.pattern_1.n_139-vs-ZNF135-201.alignment counts-znf_b1h_alignment/ZNF135-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF135-201/ChipExo_models_ZNF135_counts-pos.pattern_2.n_47-vs-ZNF135-201.alignment counts-znf_b1h_alignment/ZNF135-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF135-201/ChipExo_models_ZNF135_counts-pos.pattern_3.n_45-vs-ZNF135-201.alignment counts-znf_b1h_alignment/ZNF135-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF135-201/ChipExo_models_ZNF135_counts-pos.pattern_4.n_40-vs-ZNF135-201.alignment counts-znf_b1h_alignment/ZNF135-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF135-202/ChipExo_models_ZNF135_counts-pos.pattern_0.n_927-vs-ZNF135-202.alignment counts-znf_b1h_alignment/ZNF135-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF135-202/ChipExo_models_ZNF135_counts-pos.pattern_1.n_139-vs-ZNF135-202.alignment counts-znf_b1h_alignment/ZNF135-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF135-202/ChipExo_models_ZNF135_counts-pos.pattern_2.n_47-vs-ZNF135-202.alignment counts-znf_b1h_alignment/ZNF135-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF135-202/ChipExo_models_ZNF135_counts-pos.pattern_3.n_45-vs-ZNF135-202.alignment counts-znf_b1h_alignment/ZNF135-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF135-202/ChipExo_models_ZNF135_counts-pos.pattern_4.n_40-vs-ZNF135-202.alignment counts-znf_b1h_alignment/ZNF135-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF136-201/ChipExo_models_ZNF136_counts-pos.pattern_0.n_4595-vs-ZNF136-201.alignment counts-znf_b1h_alignment/ZNF136-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF136-201/ChipExo_models_ZNF136_counts-pos.pattern_1.n_417-vs-ZNF136-201.alignment counts-znf_b1h_alignment/ZNF136-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF136-201/Hughes_NB_models_ZNF136_counts-neg.pattern_0.n_32-vs-ZNF136-201.alignment counts-znf_b1h_alignment/ZNF136-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF136-201/Hughes_NB_models_ZNF136_counts-neg.pattern_1.n_25-vs-ZNF136-201.alignment counts-znf_b1h_alignment/ZNF136-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF136-201/Hughes_NB_models_ZNF136_counts-pos.pattern_0.n_6105-vs-ZNF136-201.alignment counts-znf_b1h_alignment/ZNF136-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF136-201/Hughes_NB_models_ZNF136_counts-pos.pattern_1.n_606-vs-ZNF136-201.alignment counts-znf_b1h_alignment/ZNF136-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF136-201/Hughes_NB_models_ZNF136_counts-pos.pattern_2.n_60-vs-ZNF136-201.alignment counts-znf_b1h_alignment/ZNF136-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF138-201/neg_patterns.ENCSR551KAP_ChIP_ZNF138_HEK293_ENCSR318ZNC_counts_pattern_0.n_26-vs-ZNF138-201.alignment counts-znf_b1h_alignment/ZNF138-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF138-201/neg_patterns.ENCSR551KAP_ChIP_ZNF138_HEK293_ENCSR318ZNC_counts_pattern_1.n_23-vs-ZNF138-201.alignment counts-znf_b1h_alignment/ZNF138-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF138-201/neg_patterns.ENCSR551KAP_ChIP_ZNF138_HEK293_ENCSR318ZNC_counts_pattern_2.n_22-vs-ZNF138-201.alignment counts-znf_b1h_alignment/ZNF138-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF138-201/pos_patterns.ENCSR373KKV_ChIP_ZNF138_WTC11_ENCSR784KDF_counts_pattern_0.n_1808-vs-ZNF138-201.alignment counts-znf_b1h_alignment/ZNF138-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF138-201/pos_patterns.ENCSR373KKV_ChIP_ZNF138_WTC11_ENCSR784KDF_counts_pattern_1.n_1208-vs-ZNF138-201.alignment counts-znf_b1h_alignment/ZNF138-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF138-201/pos_patterns.ENCSR373KKV_ChIP_ZNF138_WTC11_ENCSR784KDF_counts_pattern_2.n_232-vs-ZNF138-201.alignment counts-znf_b1h_alignment/ZNF138-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF138-201/pos_patterns.ENCSR373KKV_ChIP_ZNF138_WTC11_ENCSR784KDF_counts_pattern_3.n_174-vs-ZNF138-201.alignment counts-znf_b1h_alignment/ZNF138-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF138-201/pos_patterns.ENCSR373KKV_ChIP_ZNF138_WTC11_ENCSR784KDF_counts_pattern_4.n_100-vs-ZNF138-201.alignment counts-znf_b1h_alignment/ZNF138-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF138-201/pos_patterns.ENCSR551KAP_ChIP_ZNF138_HEK293_ENCSR318ZNC_counts_pattern_0.n_1441-vs-ZNF138-201.alignment counts-znf_b1h_alignment/ZNF138-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF138-201/pos_patterns.ENCSR551KAP_ChIP_ZNF138_HEK293_ENCSR318ZNC_counts_pattern_1.n_324-vs-ZNF138-201.alignment counts-znf_b1h_alignment/ZNF138-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF138-201/pos_patterns.ENCSR551KAP_ChIP_ZNF138_HEK293_ENCSR318ZNC_counts_pattern_2.n_61-vs-ZNF138-201.alignment counts-znf_b1h_alignment/ZNF138-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF138-201/pos_patterns.ENCSR551KAP_ChIP_ZNF138_HEK293_ENCSR318ZNC_counts_pattern_3.n_20-vs-ZNF138-201.alignment counts-znf_b1h_alignment/ZNF138-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF138-201/pos_patterns.ENCSR910MUD_ChIP_ZNF138_HepG2_ENCSR691PQZ_counts_pattern_0.n_1939-vs-ZNF138-201.alignment counts-znf_b1h_alignment/ZNF138-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF138-201/pos_patterns.ENCSR910MUD_ChIP_ZNF138_HepG2_ENCSR691PQZ_counts_pattern_10.n_161-vs-ZNF138-201.alignment counts-znf_b1h_alignment/ZNF138-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF138-201/pos_patterns.ENCSR910MUD_ChIP_ZNF138_HepG2_ENCSR691PQZ_counts_pattern_11.n_154-vs-ZNF138-201.alignment counts-znf_b1h_alignment/ZNF138-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF138-201/pos_patterns.ENCSR910MUD_ChIP_ZNF138_HepG2_ENCSR691PQZ_counts_pattern_12.n_143-vs-ZNF138-201.alignment counts-znf_b1h_alignment/ZNF138-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF138-201/pos_patterns.ENCSR910MUD_ChIP_ZNF138_HepG2_ENCSR691PQZ_counts_pattern_13.n_127-vs-ZNF138-201.alignment counts-znf_b1h_alignment/ZNF138-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF138-201/pos_patterns.ENCSR910MUD_ChIP_ZNF138_HepG2_ENCSR691PQZ_counts_pattern_14.n_125-vs-ZNF138-201.alignment counts-znf_b1h_alignment/ZNF138-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF138-201/pos_patterns.ENCSR910MUD_ChIP_ZNF138_HepG2_ENCSR691PQZ_counts_pattern_15.n_74-vs-ZNF138-201.alignment counts-znf_b1h_alignment/ZNF138-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF138-201/pos_patterns.ENCSR910MUD_ChIP_ZNF138_HepG2_ENCSR691PQZ_counts_pattern_16.n_63-vs-ZNF138-201.alignment counts-znf_b1h_alignment/ZNF138-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF138-201/pos_patterns.ENCSR910MUD_ChIP_ZNF138_HepG2_ENCSR691PQZ_counts_pattern_17.n_58-vs-ZNF138-201.alignment counts-znf_b1h_alignment/ZNF138-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF138-201/pos_patterns.ENCSR910MUD_ChIP_ZNF138_HepG2_ENCSR691PQZ_counts_pattern_18.n_20-vs-ZNF138-201.alignment counts-znf_b1h_alignment/ZNF138-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF138-201/pos_patterns.ENCSR910MUD_ChIP_ZNF138_HepG2_ENCSR691PQZ_counts_pattern_1.n_1274-vs-ZNF138-201.alignment counts-znf_b1h_alignment/ZNF138-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF138-201/pos_patterns.ENCSR910MUD_ChIP_ZNF138_HepG2_ENCSR691PQZ_counts_pattern_2.n_1019-vs-ZNF138-201.alignment counts-znf_b1h_alignment/ZNF138-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF138-201/pos_patterns.ENCSR910MUD_ChIP_ZNF138_HepG2_ENCSR691PQZ_counts_pattern_3.n_981-vs-ZNF138-201.alignment counts-znf_b1h_alignment/ZNF138-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF138-201/pos_patterns.ENCSR910MUD_ChIP_ZNF138_HepG2_ENCSR691PQZ_counts_pattern_4.n_574-vs-ZNF138-201.alignment counts-znf_b1h_alignment/ZNF138-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF138-201/pos_patterns.ENCSR910MUD_ChIP_ZNF138_HepG2_ENCSR691PQZ_counts_pattern_5.n_262-vs-ZNF138-201.alignment counts-znf_b1h_alignment/ZNF138-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF138-201/pos_patterns.ENCSR910MUD_ChIP_ZNF138_HepG2_ENCSR691PQZ_counts_pattern_6.n_259-vs-ZNF138-201.alignment counts-znf_b1h_alignment/ZNF138-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF138-201/pos_patterns.ENCSR910MUD_ChIP_ZNF138_HepG2_ENCSR691PQZ_counts_pattern_7.n_228-vs-ZNF138-201.alignment counts-znf_b1h_alignment/ZNF138-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF138-201/pos_patterns.ENCSR910MUD_ChIP_ZNF138_HepG2_ENCSR691PQZ_counts_pattern_8.n_211-vs-ZNF138-201.alignment counts-znf_b1h_alignment/ZNF138-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF138-201/pos_patterns.ENCSR910MUD_ChIP_ZNF138_HepG2_ENCSR691PQZ_counts_pattern_9.n_170-vs-ZNF138-201.alignment counts-znf_b1h_alignment/ZNF138-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF140-202/Hughes_GR_models_ZNF140_counts-pos.pattern_0.n_1199-vs-ZNF140-202.alignment counts-znf_b1h_alignment/ZNF140-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF140-202/Hughes_GR_models_ZNF140_counts-pos.pattern_1.n_976-vs-ZNF140-202.alignment counts-znf_b1h_alignment/ZNF140-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF140-202/Hughes_GR_models_ZNF140_counts-pos.pattern_2.n_704-vs-ZNF140-202.alignment counts-znf_b1h_alignment/ZNF140-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF140-202/Hughes_GR_models_ZNF140_counts-pos.pattern_3.n_488-vs-ZNF140-202.alignment counts-znf_b1h_alignment/ZNF140-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF140-202/Hughes_GR_models_ZNF140_counts-pos.pattern_4.n_63-vs-ZNF140-202.alignment counts-znf_b1h_alignment/ZNF140-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF140-202/pos_patterns.ENCSR377HQG_ChIP_ZNF140_K562_ENCSR748XRP_counts_pattern_0.n_192-vs-ZNF140-202.alignment counts-znf_b1h_alignment/ZNF140-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF140-202/pos_patterns.ENCSR377HQG_ChIP_ZNF140_K562_ENCSR748XRP_counts_pattern_1.n_173-vs-ZNF140-202.alignment counts-znf_b1h_alignment/ZNF140-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF140-202/pos_patterns.ENCSR377HQG_ChIP_ZNF140_K562_ENCSR748XRP_counts_pattern_2.n_74-vs-ZNF140-202.alignment counts-znf_b1h_alignment/ZNF140-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF140-202/pos_patterns.ENCSR377HQG_ChIP_ZNF140_K562_ENCSR748XRP_counts_pattern_3.n_52-vs-ZNF140-202.alignment counts-znf_b1h_alignment/ZNF140-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF140-202/pos_patterns.ENCSR377HQG_ChIP_ZNF140_K562_ENCSR748XRP_counts_pattern_4.n_52-vs-ZNF140-202.alignment counts-znf_b1h_alignment/ZNF140-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF140-202/pos_patterns.ENCSR377HQG_ChIP_ZNF140_K562_ENCSR748XRP_counts_pattern_5.n_38-vs-ZNF140-202.alignment counts-znf_b1h_alignment/ZNF140-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF140-202/pos_patterns.ENCSR377HQG_ChIP_ZNF140_K562_ENCSR748XRP_counts_pattern_6.n_37-vs-ZNF140-202.alignment counts-znf_b1h_alignment/ZNF140-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF140-202/pos_patterns.ENCSR377HQG_ChIP_ZNF140_K562_ENCSR748XRP_counts_pattern_7.n_26-vs-ZNF140-202.alignment counts-znf_b1h_alignment/ZNF140-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF140-202/pos_patterns.ENCSR377HQG_ChIP_ZNF140_K562_ENCSR748XRP_counts_pattern_8.n_25-vs-ZNF140-202.alignment counts-znf_b1h_alignment/ZNF140-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF140-202/pos_patterns.ENCSR464KFG_ChIP_ZNF140_HEK293_ENCSR374NAK_counts_pattern_0.n_5256-vs-ZNF140-202.alignment counts-znf_b1h_alignment/ZNF140-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF140-202/pos_patterns.ENCSR464KFG_ChIP_ZNF140_HEK293_ENCSR374NAK_counts_pattern_1.n_2217-vs-ZNF140-202.alignment counts-znf_b1h_alignment/ZNF140-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF140-202/pos_patterns.ENCSR464KFG_ChIP_ZNF140_HEK293_ENCSR374NAK_counts_pattern_2.n_600-vs-ZNF140-202.alignment counts-znf_b1h_alignment/ZNF140-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF140-202/pos_patterns.ENCSR464KFG_ChIP_ZNF140_HEK293_ENCSR374NAK_counts_pattern_3.n_499-vs-ZNF140-202.alignment counts-znf_b1h_alignment/ZNF140-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF140-202/pos_patterns.ENCSR464KFG_ChIP_ZNF140_HEK293_ENCSR374NAK_counts_pattern_4.n_130-vs-ZNF140-202.alignment counts-znf_b1h_alignment/ZNF140-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF140-202/pos_patterns.ENCSR464KFG_ChIP_ZNF140_HEK293_ENCSR374NAK_counts_pattern_5.n_106-vs-ZNF140-202.alignment counts-znf_b1h_alignment/ZNF140-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF140-202/pos_patterns.ENCSR464KFG_ChIP_ZNF140_HEK293_ENCSR374NAK_counts_pattern_6.n_76-vs-ZNF140-202.alignment counts-znf_b1h_alignment/ZNF140-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF140-202/pos_patterns.ENCSR464KFG_ChIP_ZNF140_HEK293_ENCSR374NAK_counts_pattern_7.n_36-vs-ZNF140-202.alignment counts-znf_b1h_alignment/ZNF140-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF140-202/pos_patterns.ENCSR464KFG_ChIP_ZNF140_HEK293_ENCSR374NAK_counts_pattern_8.n_25-vs-ZNF140-202.alignment counts-znf_b1h_alignment/ZNF140-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF141-201/ChipExo_models_ZNF141_counts-pos.pattern_0.n_6896-vs-ZNF141-201.alignment counts-znf_b1h_alignment/ZNF141-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF141-201/ChipExo_models_ZNF141_counts-pos.pattern_1.n_280-vs-ZNF141-201.alignment counts-znf_b1h_alignment/ZNF141-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF141-201/ChipExo_models_ZNF141_counts-pos.pattern_2.n_36-vs-ZNF141-201.alignment counts-znf_b1h_alignment/ZNF141-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF141-201/ChipExo_models_ZNF141_counts-pos.pattern_3.n_30-vs-ZNF141-201.alignment counts-znf_b1h_alignment/ZNF141-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF141-201/ChipExo_models_ZNF141_counts-pos.pattern_4.n_23-vs-ZNF141-201.alignment counts-znf_b1h_alignment/ZNF141-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF142-201/pos_patterns.ENCSR512ECF_ChIP_ZNF142_HepG2_ENCSR101IBF_counts_pattern_0.n_1877-vs-ZNF142-201.alignment counts-znf_b1h_alignment/ZNF142-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF142-201/pos_patterns.ENCSR512ECF_ChIP_ZNF142_HepG2_ENCSR101IBF_counts_pattern_1.n_1395-vs-ZNF142-201.alignment counts-znf_b1h_alignment/ZNF142-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF142-201/pos_patterns.ENCSR512ECF_ChIP_ZNF142_HepG2_ENCSR101IBF_counts_pattern_2.n_1134-vs-ZNF142-201.alignment counts-znf_b1h_alignment/ZNF142-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF142-201/pos_patterns.ENCSR512ECF_ChIP_ZNF142_HepG2_ENCSR101IBF_counts_pattern_3.n_336-vs-ZNF142-201.alignment counts-znf_b1h_alignment/ZNF142-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF142-201/pos_patterns.ENCSR512ECF_ChIP_ZNF142_HepG2_ENCSR101IBF_counts_pattern_4.n_180-vs-ZNF142-201.alignment counts-znf_b1h_alignment/ZNF142-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF142-201/pos_patterns.ENCSR512ECF_ChIP_ZNF142_HepG2_ENCSR101IBF_counts_pattern_5.n_97-vs-ZNF142-201.alignment counts-znf_b1h_alignment/ZNF142-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF142-201/pos_patterns.ENCSR512ECF_ChIP_ZNF142_HepG2_ENCSR101IBF_counts_pattern_6.n_85-vs-ZNF142-201.alignment counts-znf_b1h_alignment/ZNF142-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF142-201/pos_patterns.ENCSR512ECF_ChIP_ZNF142_HepG2_ENCSR101IBF_counts_pattern_7.n_77-vs-ZNF142-201.alignment counts-znf_b1h_alignment/ZNF142-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF142-201/pos_patterns.ENCSR512ECF_ChIP_ZNF142_HepG2_ENCSR101IBF_counts_pattern_8.n_56-vs-ZNF142-201.alignment counts-znf_b1h_alignment/ZNF142-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF142-201/pos_patterns.ENCSR512ECF_ChIP_ZNF142_HepG2_ENCSR101IBF_counts_pattern_9.n_38-vs-ZNF142-201.alignment counts-znf_b1h_alignment/ZNF142-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/neg_patterns.ENCSR000EBW_ChIP_ZNF143_H1_ENCSR594EOQ_counts_pattern_0.n_58-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/neg_patterns.ENCSR000EBW_ChIP_ZNF143_H1_ENCSR594EOQ_counts_pattern_1.n_54-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/neg_patterns.ENCSR000EBW_ChIP_ZNF143_H1_ENCSR594EOQ_counts_pattern_2.n_26-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/neg_patterns.ENCSR063FUV_ChIP_ZNF143_WTC11_ENCSR643MAZ_counts_pattern_0.n_123-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/neg_patterns.ENCSR063FUV_ChIP_ZNF143_WTC11_ENCSR643MAZ_counts_pattern_1.n_32-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/neg_patterns.ENCSR063FUV_ChIP_ZNF143_WTC11_ENCSR643MAZ_counts_pattern_2.n_29-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/neg_patterns.ENCSR063FUV_ChIP_ZNF143_WTC11_ENCSR643MAZ_counts_pattern_3.n_28-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/neg_patterns.ENCSR063FUV_ChIP_ZNF143_WTC11_ENCSR643MAZ_counts_pattern_4.n_20-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/neg_patterns.ENCSR080UEM_ChIP_ZNF143_HepG2_ENCSR622AVH_counts_pattern_0.n_46-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/neg_patterns.ENCSR080UEM_ChIP_ZNF143_HepG2_ENCSR622AVH_counts_pattern_1.n_35-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/neg_patterns.ENCSR080UEM_ChIP_ZNF143_HepG2_ENCSR622AVH_counts_pattern_2.n_24-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/neg_patterns.ENCSR427WZJ_ChIP_ZNF143_K562_ENCSR694XKS_counts_pattern_0.n_425-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/neg_patterns.ENCSR427WZJ_ChIP_ZNF143_K562_ENCSR694XKS_counts_pattern_1.n_63-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/neg_patterns.ENCSR936XTK_ChIP_ZNF143_GM12878_ENCSR226UUQ_counts_pattern_0.n_33-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000DZL_ChIP_ZNF143_GM12878_ENCSR905FNM_counts_pattern_0.n_20650-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000DZL_ChIP_ZNF143_GM12878_ENCSR905FNM_counts_pattern_10.n_114-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000DZL_ChIP_ZNF143_GM12878_ENCSR905FNM_counts_pattern_11.n_95-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000DZL_ChIP_ZNF143_GM12878_ENCSR905FNM_counts_pattern_12.n_76-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000DZL_ChIP_ZNF143_GM12878_ENCSR905FNM_counts_pattern_13.n_52-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000DZL_ChIP_ZNF143_GM12878_ENCSR905FNM_counts_pattern_14.n_33-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000DZL_ChIP_ZNF143_GM12878_ENCSR905FNM_counts_pattern_15.n_30-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000DZL_ChIP_ZNF143_GM12878_ENCSR905FNM_counts_pattern_16.n_27-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000DZL_ChIP_ZNF143_GM12878_ENCSR905FNM_counts_pattern_1.n_916-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000DZL_ChIP_ZNF143_GM12878_ENCSR905FNM_counts_pattern_2.n_686-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000DZL_ChIP_ZNF143_GM12878_ENCSR905FNM_counts_pattern_3.n_492-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000DZL_ChIP_ZNF143_GM12878_ENCSR905FNM_counts_pattern_4.n_388-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000DZL_ChIP_ZNF143_GM12878_ENCSR905FNM_counts_pattern_5.n_367-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000DZL_ChIP_ZNF143_GM12878_ENCSR905FNM_counts_pattern_6.n_169-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000DZL_ChIP_ZNF143_GM12878_ENCSR905FNM_counts_pattern_7.n_155-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000DZL_ChIP_ZNF143_GM12878_ENCSR905FNM_counts_pattern_8.n_128-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000DZL_ChIP_ZNF143_GM12878_ENCSR905FNM_counts_pattern_9.n_115-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EBW_ChIP_ZNF143_H1_ENCSR594EOQ_counts_pattern_0.n_21684-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EBW_ChIP_ZNF143_H1_ENCSR594EOQ_counts_pattern_10.n_252-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EBW_ChIP_ZNF143_H1_ENCSR594EOQ_counts_pattern_11.n_246-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EBW_ChIP_ZNF143_H1_ENCSR594EOQ_counts_pattern_12.n_228-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EBW_ChIP_ZNF143_H1_ENCSR594EOQ_counts_pattern_13.n_224-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EBW_ChIP_ZNF143_H1_ENCSR594EOQ_counts_pattern_14.n_217-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EBW_ChIP_ZNF143_H1_ENCSR594EOQ_counts_pattern_15.n_211-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EBW_ChIP_ZNF143_H1_ENCSR594EOQ_counts_pattern_16.n_180-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EBW_ChIP_ZNF143_H1_ENCSR594EOQ_counts_pattern_17.n_156-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EBW_ChIP_ZNF143_H1_ENCSR594EOQ_counts_pattern_18.n_154-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EBW_ChIP_ZNF143_H1_ENCSR594EOQ_counts_pattern_19.n_125-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EBW_ChIP_ZNF143_H1_ENCSR594EOQ_counts_pattern_1.n_975-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EBW_ChIP_ZNF143_H1_ENCSR594EOQ_counts_pattern_20.n_111-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EBW_ChIP_ZNF143_H1_ENCSR594EOQ_counts_pattern_21.n_100-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EBW_ChIP_ZNF143_H1_ENCSR594EOQ_counts_pattern_22.n_99-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EBW_ChIP_ZNF143_H1_ENCSR594EOQ_counts_pattern_23.n_96-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EBW_ChIP_ZNF143_H1_ENCSR594EOQ_counts_pattern_24.n_95-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EBW_ChIP_ZNF143_H1_ENCSR594EOQ_counts_pattern_25.n_80-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EBW_ChIP_ZNF143_H1_ENCSR594EOQ_counts_pattern_26.n_76-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EBW_ChIP_ZNF143_H1_ENCSR594EOQ_counts_pattern_27.n_69-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EBW_ChIP_ZNF143_H1_ENCSR594EOQ_counts_pattern_28.n_68-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EBW_ChIP_ZNF143_H1_ENCSR594EOQ_counts_pattern_29.n_66-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EBW_ChIP_ZNF143_H1_ENCSR594EOQ_counts_pattern_2.n_727-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EBW_ChIP_ZNF143_H1_ENCSR594EOQ_counts_pattern_30.n_61-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EBW_ChIP_ZNF143_H1_ENCSR594EOQ_counts_pattern_31.n_58-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EBW_ChIP_ZNF143_H1_ENCSR594EOQ_counts_pattern_32.n_46-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EBW_ChIP_ZNF143_H1_ENCSR594EOQ_counts_pattern_33.n_45-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EBW_ChIP_ZNF143_H1_ENCSR594EOQ_counts_pattern_34.n_42-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EBW_ChIP_ZNF143_H1_ENCSR594EOQ_counts_pattern_35.n_41-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EBW_ChIP_ZNF143_H1_ENCSR594EOQ_counts_pattern_3.n_567-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EBW_ChIP_ZNF143_H1_ENCSR594EOQ_counts_pattern_4.n_540-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EBW_ChIP_ZNF143_H1_ENCSR594EOQ_counts_pattern_5.n_515-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EBW_ChIP_ZNF143_H1_ENCSR594EOQ_counts_pattern_6.n_496-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EBW_ChIP_ZNF143_H1_ENCSR594EOQ_counts_pattern_7.n_326-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EBW_ChIP_ZNF143_H1_ENCSR594EOQ_counts_pattern_8.n_318-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EBW_ChIP_ZNF143_H1_ENCSR594EOQ_counts_pattern_9.n_283-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000ECO_ChIP_ZNF143_HeLa-S3_ENCSR875FHC_counts_pattern_0.n_3061-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000ECO_ChIP_ZNF143_HeLa-S3_ENCSR875FHC_counts_pattern_1.n_1937-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000ECO_ChIP_ZNF143_HeLa-S3_ENCSR875FHC_counts_pattern_2.n_1220-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000ECO_ChIP_ZNF143_HeLa-S3_ENCSR875FHC_counts_pattern_3.n_132-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000ECO_ChIP_ZNF143_HeLa-S3_ENCSR875FHC_counts_pattern_4.n_119-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000ECO_ChIP_ZNF143_HeLa-S3_ENCSR875FHC_counts_pattern_5.n_74-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EGP_ChIP_ZNF143_K562_ENCSR475KCX_counts_pattern_0.n_18970-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EGP_ChIP_ZNF143_K562_ENCSR475KCX_counts_pattern_10.n_229-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EGP_ChIP_ZNF143_K562_ENCSR475KCX_counts_pattern_11.n_159-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EGP_ChIP_ZNF143_K562_ENCSR475KCX_counts_pattern_12.n_77-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EGP_ChIP_ZNF143_K562_ENCSR475KCX_counts_pattern_13.n_72-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EGP_ChIP_ZNF143_K562_ENCSR475KCX_counts_pattern_14.n_64-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EGP_ChIP_ZNF143_K562_ENCSR475KCX_counts_pattern_15.n_61-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EGP_ChIP_ZNF143_K562_ENCSR475KCX_counts_pattern_16.n_45-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EGP_ChIP_ZNF143_K562_ENCSR475KCX_counts_pattern_17.n_33-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EGP_ChIP_ZNF143_K562_ENCSR475KCX_counts_pattern_18.n_21-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EGP_ChIP_ZNF143_K562_ENCSR475KCX_counts_pattern_1.n_1326-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EGP_ChIP_ZNF143_K562_ENCSR475KCX_counts_pattern_2.n_1110-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EGP_ChIP_ZNF143_K562_ENCSR475KCX_counts_pattern_3.n_1040-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EGP_ChIP_ZNF143_K562_ENCSR475KCX_counts_pattern_4.n_1029-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EGP_ChIP_ZNF143_K562_ENCSR475KCX_counts_pattern_5.n_1023-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EGP_ChIP_ZNF143_K562_ENCSR475KCX_counts_pattern_6.n_637-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EGP_ChIP_ZNF143_K562_ENCSR475KCX_counts_pattern_7.n_509-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EGP_ChIP_ZNF143_K562_ENCSR475KCX_counts_pattern_8.n_502-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR000EGP_ChIP_ZNF143_K562_ENCSR475KCX_counts_pattern_9.n_441-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR063FUV_ChIP_ZNF143_WTC11_ENCSR643MAZ_counts_pattern_0.n_2886-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR063FUV_ChIP_ZNF143_WTC11_ENCSR643MAZ_counts_pattern_1.n_2627-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR063FUV_ChIP_ZNF143_WTC11_ENCSR643MAZ_counts_pattern_2.n_432-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR063FUV_ChIP_ZNF143_WTC11_ENCSR643MAZ_counts_pattern_3.n_210-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR063FUV_ChIP_ZNF143_WTC11_ENCSR643MAZ_counts_pattern_4.n_32-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR080UEM_ChIP_ZNF143_HepG2_ENCSR622AVH_counts_pattern_0.n_7105-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR080UEM_ChIP_ZNF143_HepG2_ENCSR622AVH_counts_pattern_10.n_33-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR080UEM_ChIP_ZNF143_HepG2_ENCSR622AVH_counts_pattern_11.n_29-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR080UEM_ChIP_ZNF143_HepG2_ENCSR622AVH_counts_pattern_1.n_755-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR080UEM_ChIP_ZNF143_HepG2_ENCSR622AVH_counts_pattern_2.n_433-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR080UEM_ChIP_ZNF143_HepG2_ENCSR622AVH_counts_pattern_3.n_358-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR080UEM_ChIP_ZNF143_HepG2_ENCSR622AVH_counts_pattern_4.n_305-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR080UEM_ChIP_ZNF143_HepG2_ENCSR622AVH_counts_pattern_5.n_259-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR080UEM_ChIP_ZNF143_HepG2_ENCSR622AVH_counts_pattern_6.n_103-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR080UEM_ChIP_ZNF143_HepG2_ENCSR622AVH_counts_pattern_7.n_67-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR080UEM_ChIP_ZNF143_HepG2_ENCSR622AVH_counts_pattern_8.n_48-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR080UEM_ChIP_ZNF143_HepG2_ENCSR622AVH_counts_pattern_9.n_39-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR427WZJ_ChIP_ZNF143_K562_ENCSR694XKS_counts_pattern_0.n_2688-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR427WZJ_ChIP_ZNF143_K562_ENCSR694XKS_counts_pattern_1.n_2469-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR427WZJ_ChIP_ZNF143_K562_ENCSR694XKS_counts_pattern_2.n_587-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR427WZJ_ChIP_ZNF143_K562_ENCSR694XKS_counts_pattern_3.n_408-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR427WZJ_ChIP_ZNF143_K562_ENCSR694XKS_counts_pattern_4.n_156-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR427WZJ_ChIP_ZNF143_K562_ENCSR694XKS_counts_pattern_5.n_52-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR427WZJ_ChIP_ZNF143_K562_ENCSR694XKS_counts_pattern_6.n_23-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR427WZJ_ChIP_ZNF143_K562_ENCSR694XKS_counts_pattern_7.n_21-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR936XTK_ChIP_ZNF143_GM12878_ENCSR226UUQ_counts_pattern_0.n_11631-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR936XTK_ChIP_ZNF143_GM12878_ENCSR226UUQ_counts_pattern_10.n_160-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR936XTK_ChIP_ZNF143_GM12878_ENCSR226UUQ_counts_pattern_11.n_120-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR936XTK_ChIP_ZNF143_GM12878_ENCSR226UUQ_counts_pattern_12.n_108-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR936XTK_ChIP_ZNF143_GM12878_ENCSR226UUQ_counts_pattern_13.n_92-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR936XTK_ChIP_ZNF143_GM12878_ENCSR226UUQ_counts_pattern_14.n_90-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR936XTK_ChIP_ZNF143_GM12878_ENCSR226UUQ_counts_pattern_1.n_4087-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR936XTK_ChIP_ZNF143_GM12878_ENCSR226UUQ_counts_pattern_2.n_809-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR936XTK_ChIP_ZNF143_GM12878_ENCSR226UUQ_counts_pattern_3.n_494-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR936XTK_ChIP_ZNF143_GM12878_ENCSR226UUQ_counts_pattern_4.n_487-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR936XTK_ChIP_ZNF143_GM12878_ENCSR226UUQ_counts_pattern_5.n_376-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR936XTK_ChIP_ZNF143_GM12878_ENCSR226UUQ_counts_pattern_6.n_356-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR936XTK_ChIP_ZNF143_GM12878_ENCSR226UUQ_counts_pattern_7.n_347-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR936XTK_ChIP_ZNF143_GM12878_ENCSR226UUQ_counts_pattern_8.n_335-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR936XTK_ChIP_ZNF143_GM12878_ENCSR226UUQ_counts_pattern_9.n_236-vs-ZNF143-201.alignment counts-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF146-201/Hughes_GR_models_ZNF146_counts-pos.pattern_0.n_6743-vs-ZNF146-201.alignment counts-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF146-201/Hughes_GR_models_ZNF146_counts-pos.pattern_1.n_179-vs-ZNF146-201.alignment counts-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF146-201/Hughes_GR_models_ZNF146_counts-pos.pattern_2.n_20-vs-ZNF146-201.alignment counts-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR689YFA_ChIP_ZNF146_HEK293_ENCSR026AKK_counts_pattern_0.n_269-vs-ZNF146-201.alignment counts-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR689YFA_ChIP_ZNF146_HEK293_ENCSR026AKK_counts_pattern_1.n_159-vs-ZNF146-201.alignment counts-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR689YFA_ChIP_ZNF146_HEK293_ENCSR026AKK_counts_pattern_2.n_82-vs-ZNF146-201.alignment counts-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR689YFA_ChIP_ZNF146_HEK293_ENCSR026AKK_counts_pattern_3.n_76-vs-ZNF146-201.alignment counts-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR689YFA_ChIP_ZNF146_HEK293_ENCSR026AKK_counts_pattern_4.n_39-vs-ZNF146-201.alignment counts-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR689YFA_ChIP_ZNF146_HEK293_ENCSR026AKK_counts_pattern_5.n_36-vs-ZNF146-201.alignment counts-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR689YFA_ChIP_ZNF146_HEK293_ENCSR026AKK_counts_pattern_6.n_20-vs-ZNF146-201.alignment counts-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR713IFY_ChIP_ZNF146_K562_ENCSR132QOJ_counts_pattern_0.n_34-vs-ZNF146-201.alignment counts-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR713IFY_ChIP_ZNF146_K562_ENCSR132QOJ_counts_pattern_1.n_29-vs-ZNF146-201.alignment counts-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_counts_pattern_0.n_216-vs-ZNF146-201.alignment counts-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_counts_pattern_1.n_84-vs-ZNF146-201.alignment counts-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_counts_pattern_2.n_60-vs-ZNF146-201.alignment counts-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_counts_pattern_3.n_53-vs-ZNF146-201.alignment counts-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_counts_pattern_4.n_40-vs-ZNF146-201.alignment counts-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_counts_pattern_5.n_38-vs-ZNF146-201.alignment counts-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_counts_pattern_6.n_27-vs-ZNF146-201.alignment counts-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF146-201/pos_patterns.ENCSR689YFA_ChIP_ZNF146_HEK293_ENCSR026AKK_counts_pattern_0.n_16550-vs-ZNF146-201.alignment counts-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF146-201/pos_patterns.ENCSR689YFA_ChIP_ZNF146_HEK293_ENCSR026AKK_counts_pattern_1.n_208-vs-ZNF146-201.alignment counts-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF146-201/pos_patterns.ENCSR689YFA_ChIP_ZNF146_HEK293_ENCSR026AKK_counts_pattern_2.n_142-vs-ZNF146-201.alignment counts-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF146-201/pos_patterns.ENCSR689YFA_ChIP_ZNF146_HEK293_ENCSR026AKK_counts_pattern_3.n_68-vs-ZNF146-201.alignment counts-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF146-201/pos_patterns.ENCSR713IFY_ChIP_ZNF146_K562_ENCSR132QOJ_counts_pattern_0.n_13899-vs-ZNF146-201.alignment counts-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF146-201/pos_patterns.ENCSR713IFY_ChIP_ZNF146_K562_ENCSR132QOJ_counts_pattern_1.n_99-vs-ZNF146-201.alignment counts-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF146-201/pos_patterns.ENCSR713IFY_ChIP_ZNF146_K562_ENCSR132QOJ_counts_pattern_2.n_91-vs-ZNF146-201.alignment counts-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF146-201/pos_patterns.ENCSR713IFY_ChIP_ZNF146_K562_ENCSR132QOJ_counts_pattern_3.n_87-vs-ZNF146-201.alignment counts-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF146-201/pos_patterns.ENCSR713IFY_ChIP_ZNF146_K562_ENCSR132QOJ_counts_pattern_4.n_70-vs-ZNF146-201.alignment counts-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF146-201/pos_patterns.ENCSR713IFY_ChIP_ZNF146_K562_ENCSR132QOJ_counts_pattern_5.n_45-vs-ZNF146-201.alignment counts-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF146-201/pos_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_counts_pattern_0.n_16909-vs-ZNF146-201.alignment counts-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF146-201/pos_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_counts_pattern_1.n_109-vs-ZNF146-201.alignment counts-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF148-201/pos_patterns.ENCSR018MSO_ChIP_ZNF148_K562_ENCSR954JSO_counts_pattern_0.n_12586-vs-ZNF148-201.alignment counts-znf_b1h_alignment/ZNF148-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF148-201/pos_patterns.ENCSR018MSO_ChIP_ZNF148_K562_ENCSR954JSO_counts_pattern_1.n_1173-vs-ZNF148-201.alignment counts-znf_b1h_alignment/ZNF148-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF148-201/pos_patterns.ENCSR018MSO_ChIP_ZNF148_K562_ENCSR954JSO_counts_pattern_2.n_335-vs-ZNF148-201.alignment counts-znf_b1h_alignment/ZNF148-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF148-201/pos_patterns.ENCSR018MSO_ChIP_ZNF148_K562_ENCSR954JSO_counts_pattern_3.n_274-vs-ZNF148-201.alignment counts-znf_b1h_alignment/ZNF148-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF148-201/pos_patterns.ENCSR018MSO_ChIP_ZNF148_K562_ENCSR954JSO_counts_pattern_4.n_248-vs-ZNF148-201.alignment counts-znf_b1h_alignment/ZNF148-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF148-201/pos_patterns.ENCSR018MSO_ChIP_ZNF148_K562_ENCSR954JSO_counts_pattern_5.n_86-vs-ZNF148-201.alignment counts-znf_b1h_alignment/ZNF148-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF148-201/pos_patterns.ENCSR018MSO_ChIP_ZNF148_K562_ENCSR954JSO_counts_pattern_6.n_78-vs-ZNF148-201.alignment counts-znf_b1h_alignment/ZNF148-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF148-201/pos_patterns.ENCSR018MSO_ChIP_ZNF148_K562_ENCSR954JSO_counts_pattern_7.n_67-vs-ZNF148-201.alignment counts-znf_b1h_alignment/ZNF148-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF148-201/pos_patterns.ENCSR018MSO_ChIP_ZNF148_K562_ENCSR954JSO_counts_pattern_8.n_34-vs-ZNF148-201.alignment counts-znf_b1h_alignment/ZNF148-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF148-201/pos_patterns.ENCSR736ZKL_ChIP_ZNF148_HEK293_ENCSR763DWA_counts_pattern_0.n_666-vs-ZNF148-201.alignment counts-znf_b1h_alignment/ZNF148-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF148-201/pos_patterns.ENCSR736ZKL_ChIP_ZNF148_HEK293_ENCSR763DWA_counts_pattern_1.n_135-vs-ZNF148-201.alignment counts-znf_b1h_alignment/ZNF148-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF148-201/pos_patterns.ENCSR736ZKL_ChIP_ZNF148_HEK293_ENCSR763DWA_counts_pattern_2.n_90-vs-ZNF148-201.alignment counts-znf_b1h_alignment/ZNF148-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF148-201/pos_patterns.ENCSR736ZKL_ChIP_ZNF148_HEK293_ENCSR763DWA_counts_pattern_3.n_80-vs-ZNF148-201.alignment counts-znf_b1h_alignment/ZNF148-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF148-201/pos_patterns.ENCSR736ZKL_ChIP_ZNF148_HEK293_ENCSR763DWA_counts_pattern_4.n_77-vs-ZNF148-201.alignment counts-znf_b1h_alignment/ZNF148-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF148-201/pos_patterns.ENCSR736ZKL_ChIP_ZNF148_HEK293_ENCSR763DWA_counts_pattern_5.n_64-vs-ZNF148-201.alignment counts-znf_b1h_alignment/ZNF148-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF148-201/pos_patterns.ENCSR736ZKL_ChIP_ZNF148_HEK293_ENCSR763DWA_counts_pattern_6.n_59-vs-ZNF148-201.alignment counts-znf_b1h_alignment/ZNF148-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF148-201/pos_patterns.ENCSR736ZKL_ChIP_ZNF148_HEK293_ENCSR763DWA_counts_pattern_7.n_57-vs-ZNF148-201.alignment counts-znf_b1h_alignment/ZNF148-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF148-201/pos_patterns.ENCSR736ZKL_ChIP_ZNF148_HEK293_ENCSR763DWA_counts_pattern_8.n_23-vs-ZNF148-201.alignment counts-znf_b1h_alignment/ZNF148-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF154-201/ChipExo_models_ZNF154_counts-pos.pattern_0.n_305-vs-ZNF154-201.alignment counts-znf_b1h_alignment/ZNF154-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF154-201/ChipExo_models_ZNF154_counts-pos.pattern_1.n_82-vs-ZNF154-201.alignment counts-znf_b1h_alignment/ZNF154-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF154-201/ChipExo_models_ZNF154_counts-pos.pattern_2.n_31-vs-ZNF154-201.alignment counts-znf_b1h_alignment/ZNF154-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF154-201/ChipExo_models_ZNF154_counts-pos.pattern_3.n_22-vs-ZNF154-201.alignment counts-znf_b1h_alignment/ZNF154-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF155-201/pos_patterns.ENCSR801BWR_ChIP_ZNF155_HEK293_ENCSR501MLT_counts_pattern_0.n_205-vs-ZNF155-201.alignment counts-znf_b1h_alignment/ZNF155-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF155-201/pos_patterns.ENCSR801BWR_ChIP_ZNF155_HEK293_ENCSR501MLT_counts_pattern_1.n_132-vs-ZNF155-201.alignment counts-znf_b1h_alignment/ZNF155-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF157-201/ChipExo_models_ZNF157_counts-pos.pattern_0.n_787-vs-ZNF157-201.alignment counts-znf_b1h_alignment/ZNF157-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF157-201/ChipExo_models_ZNF157_counts-pos.pattern_1.n_71-vs-ZNF157-201.alignment counts-znf_b1h_alignment/ZNF157-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF157-201/pos_patterns.ENCSR564YYW_ChIP_ZNF157_HEK293_ENCSR213DSH_counts_pattern_0.n_986-vs-ZNF157-201.alignment counts-znf_b1h_alignment/ZNF157-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF157-201/pos_patterns.ENCSR564YYW_ChIP_ZNF157_HEK293_ENCSR213DSH_counts_pattern_1.n_877-vs-ZNF157-201.alignment counts-znf_b1h_alignment/ZNF157-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF157-201/pos_patterns.ENCSR564YYW_ChIP_ZNF157_HEK293_ENCSR213DSH_counts_pattern_2.n_312-vs-ZNF157-201.alignment counts-znf_b1h_alignment/ZNF157-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF157-201/pos_patterns.ENCSR564YYW_ChIP_ZNF157_HEK293_ENCSR213DSH_counts_pattern_3.n_169-vs-ZNF157-201.alignment counts-znf_b1h_alignment/ZNF157-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF157-201/pos_patterns.ENCSR564YYW_ChIP_ZNF157_HEK293_ENCSR213DSH_counts_pattern_4.n_134-vs-ZNF157-201.alignment counts-znf_b1h_alignment/ZNF157-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF157-201/pos_patterns.ENCSR564YYW_ChIP_ZNF157_HEK293_ENCSR213DSH_counts_pattern_5.n_42-vs-ZNF157-201.alignment counts-znf_b1h_alignment/ZNF157-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF157-201/pos_patterns.ENCSR564YYW_ChIP_ZNF157_HEK293_ENCSR213DSH_counts_pattern_6.n_32-vs-ZNF157-201.alignment counts-znf_b1h_alignment/ZNF157-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF157-201/pos_patterns.ENCSR564YYW_ChIP_ZNF157_HEK293_ENCSR213DSH_counts_pattern_7.n_27-vs-ZNF157-201.alignment counts-znf_b1h_alignment/ZNF157-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF157-201/pos_patterns.ENCSR564YYW_ChIP_ZNF157_HEK293_ENCSR213DSH_counts_pattern_8.n_20-vs-ZNF157-201.alignment counts-znf_b1h_alignment/ZNF157-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF160-202/pos_patterns.ENCSR917SSX_ChIP_ZNF160_HepG2_ENCSR440MKI_counts_pattern_0.n_1491-vs-ZNF160-202.alignment counts-znf_b1h_alignment/ZNF160-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF160-202/pos_patterns.ENCSR917SSX_ChIP_ZNF160_HepG2_ENCSR440MKI_counts_pattern_10.n_49-vs-ZNF160-202.alignment counts-znf_b1h_alignment/ZNF160-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF160-202/pos_patterns.ENCSR917SSX_ChIP_ZNF160_HepG2_ENCSR440MKI_counts_pattern_11.n_47-vs-ZNF160-202.alignment counts-znf_b1h_alignment/ZNF160-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF160-202/pos_patterns.ENCSR917SSX_ChIP_ZNF160_HepG2_ENCSR440MKI_counts_pattern_12.n_44-vs-ZNF160-202.alignment counts-znf_b1h_alignment/ZNF160-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF160-202/pos_patterns.ENCSR917SSX_ChIP_ZNF160_HepG2_ENCSR440MKI_counts_pattern_13.n_42-vs-ZNF160-202.alignment counts-znf_b1h_alignment/ZNF160-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF160-202/pos_patterns.ENCSR917SSX_ChIP_ZNF160_HepG2_ENCSR440MKI_counts_pattern_14.n_42-vs-ZNF160-202.alignment counts-znf_b1h_alignment/ZNF160-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF160-202/pos_patterns.ENCSR917SSX_ChIP_ZNF160_HepG2_ENCSR440MKI_counts_pattern_15.n_35-vs-ZNF160-202.alignment counts-znf_b1h_alignment/ZNF160-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF160-202/pos_patterns.ENCSR917SSX_ChIP_ZNF160_HepG2_ENCSR440MKI_counts_pattern_16.n_26-vs-ZNF160-202.alignment counts-znf_b1h_alignment/ZNF160-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF160-202/pos_patterns.ENCSR917SSX_ChIP_ZNF160_HepG2_ENCSR440MKI_counts_pattern_1.n_925-vs-ZNF160-202.alignment counts-znf_b1h_alignment/ZNF160-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF160-202/pos_patterns.ENCSR917SSX_ChIP_ZNF160_HepG2_ENCSR440MKI_counts_pattern_2.n_233-vs-ZNF160-202.alignment counts-znf_b1h_alignment/ZNF160-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF160-202/pos_patterns.ENCSR917SSX_ChIP_ZNF160_HepG2_ENCSR440MKI_counts_pattern_3.n_230-vs-ZNF160-202.alignment counts-znf_b1h_alignment/ZNF160-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF160-202/pos_patterns.ENCSR917SSX_ChIP_ZNF160_HepG2_ENCSR440MKI_counts_pattern_4.n_101-vs-ZNF160-202.alignment counts-znf_b1h_alignment/ZNF160-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF160-202/pos_patterns.ENCSR917SSX_ChIP_ZNF160_HepG2_ENCSR440MKI_counts_pattern_5.n_97-vs-ZNF160-202.alignment counts-znf_b1h_alignment/ZNF160-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF160-202/pos_patterns.ENCSR917SSX_ChIP_ZNF160_HepG2_ENCSR440MKI_counts_pattern_6.n_90-vs-ZNF160-202.alignment counts-znf_b1h_alignment/ZNF160-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF160-202/pos_patterns.ENCSR917SSX_ChIP_ZNF160_HepG2_ENCSR440MKI_counts_pattern_7.n_67-vs-ZNF160-202.alignment counts-znf_b1h_alignment/ZNF160-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF160-202/pos_patterns.ENCSR917SSX_ChIP_ZNF160_HepG2_ENCSR440MKI_counts_pattern_8.n_62-vs-ZNF160-202.alignment counts-znf_b1h_alignment/ZNF160-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF160-202/pos_patterns.ENCSR917SSX_ChIP_ZNF160_HepG2_ENCSR440MKI_counts_pattern_9.n_49-vs-ZNF160-202.alignment counts-znf_b1h_alignment/ZNF160-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF16-201/Hughes_GR_models_ZNF16_counts-pos.pattern_0.n_44-vs-ZNF16-201.alignment counts-znf_b1h_alignment/ZNF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF16-201/Hughes_GR_models_ZNF16_counts-pos.pattern_1.n_37-vs-ZNF16-201.alignment counts-znf_b1h_alignment/ZNF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF16-201/Hughes_GR_models_ZNF16_counts-pos.pattern_2.n_35-vs-ZNF16-201.alignment counts-znf_b1h_alignment/ZNF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF16-201/Hughes_GR_models_ZNF16_counts-pos.pattern_3.n_31-vs-ZNF16-201.alignment counts-znf_b1h_alignment/ZNF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF16-201/Hughes_GR_models_ZNF16_counts-pos.pattern_4.n_26-vs-ZNF16-201.alignment counts-znf_b1h_alignment/ZNF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF16-201/Hughes_GR_models_ZNF16_counts-pos.pattern_5.n_25-vs-ZNF16-201.alignment counts-znf_b1h_alignment/ZNF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF16-201/Hughes_GR_models_ZNF16_counts-pos.pattern_6.n_25-vs-ZNF16-201.alignment counts-znf_b1h_alignment/ZNF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF16-201/Hughes_GR_models_ZNF16_counts-pos.pattern_7.n_24-vs-ZNF16-201.alignment counts-znf_b1h_alignment/ZNF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF16-201/Hughes_GR_models_ZNF16_counts-pos.pattern_8.n_23-vs-ZNF16-201.alignment counts-znf_b1h_alignment/ZNF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF16-201/Hughes_NB_models_ZNF16_counts-pos.pattern_0.n_44-vs-ZNF16-201.alignment counts-znf_b1h_alignment/ZNF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF16-201/Hughes_NB_models_ZNF16_counts-pos.pattern_1.n_35-vs-ZNF16-201.alignment counts-znf_b1h_alignment/ZNF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF16-201/Hughes_NB_models_ZNF16_counts-pos.pattern_2.n_23-vs-ZNF16-201.alignment counts-znf_b1h_alignment/ZNF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF16-201/pos_patterns.ENCSR093HXE_ChIP_ZNF16_HEK293_ENCSR101YMY_counts_pattern_0.n_1534-vs-ZNF16-201.alignment counts-znf_b1h_alignment/ZNF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF16-201/pos_patterns.ENCSR093HXE_ChIP_ZNF16_HEK293_ENCSR101YMY_counts_pattern_1.n_151-vs-ZNF16-201.alignment counts-znf_b1h_alignment/ZNF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF16-201/pos_patterns.ENCSR093HXE_ChIP_ZNF16_HEK293_ENCSR101YMY_counts_pattern_2.n_92-vs-ZNF16-201.alignment counts-znf_b1h_alignment/ZNF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF16-201/pos_patterns.ENCSR093HXE_ChIP_ZNF16_HEK293_ENCSR101YMY_counts_pattern_3.n_75-vs-ZNF16-201.alignment counts-znf_b1h_alignment/ZNF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF16-201/pos_patterns.ENCSR093HXE_ChIP_ZNF16_HEK293_ENCSR101YMY_counts_pattern_4.n_61-vs-ZNF16-201.alignment counts-znf_b1h_alignment/ZNF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF16-201/pos_patterns.ENCSR093HXE_ChIP_ZNF16_HEK293_ENCSR101YMY_counts_pattern_5.n_53-vs-ZNF16-201.alignment counts-znf_b1h_alignment/ZNF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF165-201/pos_patterns.ENCSR172XJS_ChIP_ZNF165_K562_ENCSR162QHC_counts_pattern_0.n_967-vs-ZNF165-201.alignment counts-znf_b1h_alignment/ZNF165-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF165-201/pos_patterns.ENCSR172XJS_ChIP_ZNF165_K562_ENCSR162QHC_counts_pattern_1.n_59-vs-ZNF165-201.alignment counts-znf_b1h_alignment/ZNF165-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF165-201/pos_patterns.ENCSR172XJS_ChIP_ZNF165_K562_ENCSR162QHC_counts_pattern_2.n_42-vs-ZNF165-201.alignment counts-znf_b1h_alignment/ZNF165-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF165-201/pos_patterns.ENCSR172XJS_ChIP_ZNF165_K562_ENCSR162QHC_counts_pattern_3.n_25-vs-ZNF165-201.alignment counts-znf_b1h_alignment/ZNF165-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF165-201/pos_patterns.ENCSR172XJS_ChIP_ZNF165_K562_ENCSR162QHC_counts_pattern_4.n_25-vs-ZNF165-201.alignment counts-znf_b1h_alignment/ZNF165-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF165-201/pos_patterns.ENCSR172XJS_ChIP_ZNF165_K562_ENCSR162QHC_counts_pattern_5.n_24-vs-ZNF165-201.alignment counts-znf_b1h_alignment/ZNF165-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF165-201/pos_patterns.ENCSR172XJS_ChIP_ZNF165_K562_ENCSR162QHC_counts_pattern_6.n_23-vs-ZNF165-201.alignment counts-znf_b1h_alignment/ZNF165-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF165-201/pos_patterns.ENCSR172XJS_ChIP_ZNF165_K562_ENCSR162QHC_counts_pattern_7.n_20-vs-ZNF165-201.alignment counts-znf_b1h_alignment/ZNF165-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF165-201/pos_patterns.ENCSR172XJS_ChIP_ZNF165_K562_ENCSR162QHC_counts_pattern_8.n_20-vs-ZNF165-201.alignment counts-znf_b1h_alignment/ZNF165-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF169-202/ChipExo_models_ZNF169_counts-pos.pattern_0.n_3137-vs-ZNF169-202.alignment counts-znf_b1h_alignment/ZNF169-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF169-202/ChipExo_models_ZNF169_counts-pos.pattern_1.n_885-vs-ZNF169-202.alignment counts-znf_b1h_alignment/ZNF169-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF169-202/ChipExo_models_ZNF169_counts-pos.pattern_2.n_767-vs-ZNF169-202.alignment counts-znf_b1h_alignment/ZNF169-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF169-202/ChipExo_models_ZNF169_counts-pos.pattern_3.n_490-vs-ZNF169-202.alignment counts-znf_b1h_alignment/ZNF169-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF169-202/ChipExo_models_ZNF169_counts-pos.pattern_4.n_278-vs-ZNF169-202.alignment counts-znf_b1h_alignment/ZNF169-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF169-202/ChipExo_models_ZNF169_counts-pos.pattern_5.n_217-vs-ZNF169-202.alignment counts-znf_b1h_alignment/ZNF169-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF169-202/ChipExo_models_ZNF169_counts-pos.pattern_6.n_76-vs-ZNF169-202.alignment counts-znf_b1h_alignment/ZNF169-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF169-202/ChipExo_models_ZNF169_counts-pos.pattern_7.n_69-vs-ZNF169-202.alignment counts-znf_b1h_alignment/ZNF169-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF169-202/pos_patterns.ENCSR661AXW_ChIP_ZNF169_HEK293_ENCSR963VLC_counts_pattern_0.n_373-vs-ZNF169-202.alignment counts-znf_b1h_alignment/ZNF169-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF169-202/pos_patterns.ENCSR661AXW_ChIP_ZNF169_HEK293_ENCSR963VLC_counts_pattern_1.n_365-vs-ZNF169-202.alignment counts-znf_b1h_alignment/ZNF169-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF169-202/pos_patterns.ENCSR661AXW_ChIP_ZNF169_HEK293_ENCSR963VLC_counts_pattern_2.n_112-vs-ZNF169-202.alignment counts-znf_b1h_alignment/ZNF169-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF169-202/pos_patterns.ENCSR661AXW_ChIP_ZNF169_HEK293_ENCSR963VLC_counts_pattern_3.n_112-vs-ZNF169-202.alignment counts-znf_b1h_alignment/ZNF169-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF169-202/pos_patterns.ENCSR661AXW_ChIP_ZNF169_HEK293_ENCSR963VLC_counts_pattern_4.n_79-vs-ZNF169-202.alignment counts-znf_b1h_alignment/ZNF169-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF169-202/pos_patterns.ENCSR661AXW_ChIP_ZNF169_HEK293_ENCSR963VLC_counts_pattern_5.n_49-vs-ZNF169-202.alignment counts-znf_b1h_alignment/ZNF169-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF17-201/ChipExo_models_ZNF17_counts-pos.pattern_0.n_213-vs-ZNF17-201.alignment counts-znf_b1h_alignment/ZNF17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF17-201/ChipExo_models_ZNF17_counts-pos.pattern_10.n_29-vs-ZNF17-201.alignment counts-znf_b1h_alignment/ZNF17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF17-201/ChipExo_models_ZNF17_counts-pos.pattern_11.n_24-vs-ZNF17-201.alignment counts-znf_b1h_alignment/ZNF17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF17-201/ChipExo_models_ZNF17_counts-pos.pattern_1.n_188-vs-ZNF17-201.alignment counts-znf_b1h_alignment/ZNF17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF17-201/ChipExo_models_ZNF17_counts-pos.pattern_2.n_185-vs-ZNF17-201.alignment counts-znf_b1h_alignment/ZNF17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF17-201/ChipExo_models_ZNF17_counts-pos.pattern_3.n_150-vs-ZNF17-201.alignment counts-znf_b1h_alignment/ZNF17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF17-201/ChipExo_models_ZNF17_counts-pos.pattern_4.n_121-vs-ZNF17-201.alignment counts-znf_b1h_alignment/ZNF17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF17-201/ChipExo_models_ZNF17_counts-pos.pattern_5.n_120-vs-ZNF17-201.alignment counts-znf_b1h_alignment/ZNF17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF17-201/ChipExo_models_ZNF17_counts-pos.pattern_6.n_53-vs-ZNF17-201.alignment counts-znf_b1h_alignment/ZNF17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF17-201/ChipExo_models_ZNF17_counts-pos.pattern_7.n_52-vs-ZNF17-201.alignment counts-znf_b1h_alignment/ZNF17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF17-201/ChipExo_models_ZNF17_counts-pos.pattern_8.n_42-vs-ZNF17-201.alignment counts-znf_b1h_alignment/ZNF17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF17-201/ChipExo_models_ZNF17_counts-pos.pattern_9.n_33-vs-ZNF17-201.alignment counts-znf_b1h_alignment/ZNF17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF17-201/pos_patterns.ENCSR075BAS_ChIP_ZNF17_HepG2_ENCSR073HZZ_counts_pattern_0.n_438-vs-ZNF17-201.alignment counts-znf_b1h_alignment/ZNF17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF17-201/pos_patterns.ENCSR075BAS_ChIP_ZNF17_HepG2_ENCSR073HZZ_counts_pattern_10.n_31-vs-ZNF17-201.alignment counts-znf_b1h_alignment/ZNF17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF17-201/pos_patterns.ENCSR075BAS_ChIP_ZNF17_HepG2_ENCSR073HZZ_counts_pattern_11.n_27-vs-ZNF17-201.alignment counts-znf_b1h_alignment/ZNF17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF17-201/pos_patterns.ENCSR075BAS_ChIP_ZNF17_HepG2_ENCSR073HZZ_counts_pattern_12.n_26-vs-ZNF17-201.alignment counts-znf_b1h_alignment/ZNF17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF17-201/pos_patterns.ENCSR075BAS_ChIP_ZNF17_HepG2_ENCSR073HZZ_counts_pattern_13.n_26-vs-ZNF17-201.alignment counts-znf_b1h_alignment/ZNF17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF17-201/pos_patterns.ENCSR075BAS_ChIP_ZNF17_HepG2_ENCSR073HZZ_counts_pattern_1.n_224-vs-ZNF17-201.alignment counts-znf_b1h_alignment/ZNF17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF17-201/pos_patterns.ENCSR075BAS_ChIP_ZNF17_HepG2_ENCSR073HZZ_counts_pattern_2.n_124-vs-ZNF17-201.alignment counts-znf_b1h_alignment/ZNF17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF17-201/pos_patterns.ENCSR075BAS_ChIP_ZNF17_HepG2_ENCSR073HZZ_counts_pattern_3.n_61-vs-ZNF17-201.alignment counts-znf_b1h_alignment/ZNF17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF17-201/pos_patterns.ENCSR075BAS_ChIP_ZNF17_HepG2_ENCSR073HZZ_counts_pattern_4.n_60-vs-ZNF17-201.alignment counts-znf_b1h_alignment/ZNF17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF17-201/pos_patterns.ENCSR075BAS_ChIP_ZNF17_HepG2_ENCSR073HZZ_counts_pattern_5.n_55-vs-ZNF17-201.alignment counts-znf_b1h_alignment/ZNF17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF17-201/pos_patterns.ENCSR075BAS_ChIP_ZNF17_HepG2_ENCSR073HZZ_counts_pattern_6.n_53-vs-ZNF17-201.alignment counts-znf_b1h_alignment/ZNF17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF17-201/pos_patterns.ENCSR075BAS_ChIP_ZNF17_HepG2_ENCSR073HZZ_counts_pattern_7.n_46-vs-ZNF17-201.alignment counts-znf_b1h_alignment/ZNF17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF17-201/pos_patterns.ENCSR075BAS_ChIP_ZNF17_HepG2_ENCSR073HZZ_counts_pattern_8.n_36-vs-ZNF17-201.alignment counts-znf_b1h_alignment/ZNF17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF17-201/pos_patterns.ENCSR075BAS_ChIP_ZNF17_HepG2_ENCSR073HZZ_counts_pattern_9.n_35-vs-ZNF17-201.alignment counts-znf_b1h_alignment/ZNF17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF174-201/pos_patterns.ENCSR056VYW_ChIP_ZNF174_K562_ENCSR529OLM_counts_pattern_0.n_234-vs-ZNF174-201.alignment counts-znf_b1h_alignment/ZNF174-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF174-201/pos_patterns.ENCSR056VYW_ChIP_ZNF174_K562_ENCSR529OLM_counts_pattern_1.n_55-vs-ZNF174-201.alignment counts-znf_b1h_alignment/ZNF174-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF174-201/pos_patterns.ENCSR056VYW_ChIP_ZNF174_K562_ENCSR529OLM_counts_pattern_2.n_39-vs-ZNF174-201.alignment counts-znf_b1h_alignment/ZNF174-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF174-201/pos_patterns.ENCSR056VYW_ChIP_ZNF174_K562_ENCSR529OLM_counts_pattern_3.n_35-vs-ZNF174-201.alignment counts-znf_b1h_alignment/ZNF174-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF174-201/pos_patterns.ENCSR056VYW_ChIP_ZNF174_K562_ENCSR529OLM_counts_pattern_4.n_32-vs-ZNF174-201.alignment counts-znf_b1h_alignment/ZNF174-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF174-201/pos_patterns.ENCSR056VYW_ChIP_ZNF174_K562_ENCSR529OLM_counts_pattern_5.n_32-vs-ZNF174-201.alignment counts-znf_b1h_alignment/ZNF174-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF174-201/pos_patterns.ENCSR056VYW_ChIP_ZNF174_K562_ENCSR529OLM_counts_pattern_6.n_29-vs-ZNF174-201.alignment counts-znf_b1h_alignment/ZNF174-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF174-201/pos_patterns.ENCSR516VQK_ChIP_ZNF174_HEK293_ENCSR975CFU_counts_pattern_0.n_245-vs-ZNF174-201.alignment counts-znf_b1h_alignment/ZNF174-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF174-201/pos_patterns.ENCSR516VQK_ChIP_ZNF174_HEK293_ENCSR975CFU_counts_pattern_1.n_212-vs-ZNF174-201.alignment counts-znf_b1h_alignment/ZNF174-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF174-201/pos_patterns.ENCSR516VQK_ChIP_ZNF174_HEK293_ENCSR975CFU_counts_pattern_2.n_48-vs-ZNF174-201.alignment counts-znf_b1h_alignment/ZNF174-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF174-201/pos_patterns.ENCSR516VQK_ChIP_ZNF174_HEK293_ENCSR975CFU_counts_pattern_3.n_31-vs-ZNF174-201.alignment counts-znf_b1h_alignment/ZNF174-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF174-201/pos_patterns.ENCSR516VQK_ChIP_ZNF174_HEK293_ENCSR975CFU_counts_pattern_4.n_21-vs-ZNF174-201.alignment counts-znf_b1h_alignment/ZNF174-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF175-201/Hughes_GR_models_ZNF175_counts-pos.pattern_0.n_29-vs-ZNF175-201.alignment counts-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF175-201/Hughes_GR_models_ZNF175_counts-pos.pattern_1.n_26-vs-ZNF175-201.alignment counts-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF175-201/Hughes_GR_models_ZNF175_counts-pos.pattern_2.n_20-vs-ZNF175-201.alignment counts-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF175-201/neg_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_counts_pattern_0.n_36-vs-ZNF175-201.alignment counts-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF175-201/neg_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_counts_pattern_1.n_32-vs-ZNF175-201.alignment counts-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF175-201/neg_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_counts_pattern_2.n_28-vs-ZNF175-201.alignment counts-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF175-201/neg_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_counts_pattern_3.n_25-vs-ZNF175-201.alignment counts-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_counts_pattern_0.n_4522-vs-ZNF175-201.alignment counts-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_counts_pattern_10.n_85-vs-ZNF175-201.alignment counts-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_counts_pattern_11.n_71-vs-ZNF175-201.alignment counts-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_counts_pattern_12.n_24-vs-ZNF175-201.alignment counts-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_counts_pattern_13.n_22-vs-ZNF175-201.alignment counts-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_counts_pattern_1.n_3347-vs-ZNF175-201.alignment counts-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_counts_pattern_2.n_2907-vs-ZNF175-201.alignment counts-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_counts_pattern_3.n_2047-vs-ZNF175-201.alignment counts-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_counts_pattern_4.n_1288-vs-ZNF175-201.alignment counts-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_counts_pattern_5.n_236-vs-ZNF175-201.alignment counts-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_counts_pattern_6.n_220-vs-ZNF175-201.alignment counts-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_counts_pattern_7.n_211-vs-ZNF175-201.alignment counts-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_counts_pattern_8.n_210-vs-ZNF175-201.alignment counts-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_counts_pattern_9.n_98-vs-ZNF175-201.alignment counts-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR103GAK_ChIP_ZNF175_HEK293_ENCSR957YTI_counts_pattern_0.n_234-vs-ZNF175-201.alignment counts-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR103GAK_ChIP_ZNF175_HEK293_ENCSR957YTI_counts_pattern_1.n_69-vs-ZNF175-201.alignment counts-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR103GAK_ChIP_ZNF175_HEK293_ENCSR957YTI_counts_pattern_2.n_57-vs-ZNF175-201.alignment counts-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR103GAK_ChIP_ZNF175_HEK293_ENCSR957YTI_counts_pattern_3.n_28-vs-ZNF175-201.alignment counts-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF180-201/ChipExo_models_ZNF180_counts-pos.pattern_0.n_606-vs-ZNF180-201.alignment counts-znf_b1h_alignment/ZNF180-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF180-201/ChipExo_models_ZNF180_counts-pos.pattern_1.n_399-vs-ZNF180-201.alignment counts-znf_b1h_alignment/ZNF180-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF180-201/ChipExo_models_ZNF180_counts-pos.pattern_2.n_115-vs-ZNF180-201.alignment counts-znf_b1h_alignment/ZNF180-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF180-201/ChipExo_models_ZNF180_counts-pos.pattern_3.n_62-vs-ZNF180-201.alignment counts-znf_b1h_alignment/ZNF180-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF180-201/neg_patterns.ENCSR298DSB_ChIP_ZNF180_HepG2_ENCSR020JJT_counts_pattern_0.n_30-vs-ZNF180-201.alignment counts-znf_b1h_alignment/ZNF180-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF180-201/neg_patterns.ENCSR298DSB_ChIP_ZNF180_HepG2_ENCSR020JJT_counts_pattern_1.n_25-vs-ZNF180-201.alignment counts-znf_b1h_alignment/ZNF180-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF180-201/neg_patterns.ENCSR298DSB_ChIP_ZNF180_HepG2_ENCSR020JJT_counts_pattern_2.n_21-vs-ZNF180-201.alignment counts-znf_b1h_alignment/ZNF180-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF180-201/pos_patterns.ENCSR298DSB_ChIP_ZNF180_HepG2_ENCSR020JJT_counts_pattern_0.n_382-vs-ZNF180-201.alignment counts-znf_b1h_alignment/ZNF180-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF180-201/pos_patterns.ENCSR298DSB_ChIP_ZNF180_HepG2_ENCSR020JJT_counts_pattern_10.n_115-vs-ZNF180-201.alignment counts-znf_b1h_alignment/ZNF180-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF180-201/pos_patterns.ENCSR298DSB_ChIP_ZNF180_HepG2_ENCSR020JJT_counts_pattern_11.n_113-vs-ZNF180-201.alignment counts-znf_b1h_alignment/ZNF180-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF180-201/pos_patterns.ENCSR298DSB_ChIP_ZNF180_HepG2_ENCSR020JJT_counts_pattern_12.n_95-vs-ZNF180-201.alignment counts-znf_b1h_alignment/ZNF180-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF180-201/pos_patterns.ENCSR298DSB_ChIP_ZNF180_HepG2_ENCSR020JJT_counts_pattern_13.n_87-vs-ZNF180-201.alignment counts-znf_b1h_alignment/ZNF180-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF180-201/pos_patterns.ENCSR298DSB_ChIP_ZNF180_HepG2_ENCSR020JJT_counts_pattern_14.n_73-vs-ZNF180-201.alignment counts-znf_b1h_alignment/ZNF180-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF180-201/pos_patterns.ENCSR298DSB_ChIP_ZNF180_HepG2_ENCSR020JJT_counts_pattern_15.n_71-vs-ZNF180-201.alignment counts-znf_b1h_alignment/ZNF180-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF180-201/pos_patterns.ENCSR298DSB_ChIP_ZNF180_HepG2_ENCSR020JJT_counts_pattern_16.n_68-vs-ZNF180-201.alignment counts-znf_b1h_alignment/ZNF180-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF180-201/pos_patterns.ENCSR298DSB_ChIP_ZNF180_HepG2_ENCSR020JJT_counts_pattern_17.n_22-vs-ZNF180-201.alignment counts-znf_b1h_alignment/ZNF180-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF180-201/pos_patterns.ENCSR298DSB_ChIP_ZNF180_HepG2_ENCSR020JJT_counts_pattern_1.n_359-vs-ZNF180-201.alignment counts-znf_b1h_alignment/ZNF180-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF180-201/pos_patterns.ENCSR298DSB_ChIP_ZNF180_HepG2_ENCSR020JJT_counts_pattern_2.n_251-vs-ZNF180-201.alignment counts-znf_b1h_alignment/ZNF180-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF180-201/pos_patterns.ENCSR298DSB_ChIP_ZNF180_HepG2_ENCSR020JJT_counts_pattern_3.n_223-vs-ZNF180-201.alignment counts-znf_b1h_alignment/ZNF180-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF180-201/pos_patterns.ENCSR298DSB_ChIP_ZNF180_HepG2_ENCSR020JJT_counts_pattern_4.n_214-vs-ZNF180-201.alignment counts-znf_b1h_alignment/ZNF180-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF180-201/pos_patterns.ENCSR298DSB_ChIP_ZNF180_HepG2_ENCSR020JJT_counts_pattern_5.n_143-vs-ZNF180-201.alignment counts-znf_b1h_alignment/ZNF180-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF180-201/pos_patterns.ENCSR298DSB_ChIP_ZNF180_HepG2_ENCSR020JJT_counts_pattern_6.n_138-vs-ZNF180-201.alignment counts-znf_b1h_alignment/ZNF180-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF180-201/pos_patterns.ENCSR298DSB_ChIP_ZNF180_HepG2_ENCSR020JJT_counts_pattern_7.n_134-vs-ZNF180-201.alignment counts-znf_b1h_alignment/ZNF180-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF180-201/pos_patterns.ENCSR298DSB_ChIP_ZNF180_HepG2_ENCSR020JJT_counts_pattern_8.n_129-vs-ZNF180-201.alignment counts-znf_b1h_alignment/ZNF180-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF180-201/pos_patterns.ENCSR298DSB_ChIP_ZNF180_HepG2_ENCSR020JJT_counts_pattern_9.n_121-vs-ZNF180-201.alignment counts-znf_b1h_alignment/ZNF180-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF181-201/ChipExo_models_ZNF181_counts-pos.pattern_0.n_151-vs-ZNF181-201.alignment counts-znf_b1h_alignment/ZNF181-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF181-201/pos_patterns.ENCSR115LFG_ChIP_ZNF181_HepG2_ENCSR660ITN_counts_pattern_0.n_1630-vs-ZNF181-201.alignment counts-znf_b1h_alignment/ZNF181-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF181-201/pos_patterns.ENCSR115LFG_ChIP_ZNF181_HepG2_ENCSR660ITN_counts_pattern_10.n_298-vs-ZNF181-201.alignment counts-znf_b1h_alignment/ZNF181-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF181-201/pos_patterns.ENCSR115LFG_ChIP_ZNF181_HepG2_ENCSR660ITN_counts_pattern_11.n_238-vs-ZNF181-201.alignment counts-znf_b1h_alignment/ZNF181-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF181-201/pos_patterns.ENCSR115LFG_ChIP_ZNF181_HepG2_ENCSR660ITN_counts_pattern_12.n_212-vs-ZNF181-201.alignment counts-znf_b1h_alignment/ZNF181-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF181-201/pos_patterns.ENCSR115LFG_ChIP_ZNF181_HepG2_ENCSR660ITN_counts_pattern_13.n_209-vs-ZNF181-201.alignment counts-znf_b1h_alignment/ZNF181-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF181-201/pos_patterns.ENCSR115LFG_ChIP_ZNF181_HepG2_ENCSR660ITN_counts_pattern_14.n_174-vs-ZNF181-201.alignment counts-znf_b1h_alignment/ZNF181-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF181-201/pos_patterns.ENCSR115LFG_ChIP_ZNF181_HepG2_ENCSR660ITN_counts_pattern_15.n_152-vs-ZNF181-201.alignment counts-znf_b1h_alignment/ZNF181-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF181-201/pos_patterns.ENCSR115LFG_ChIP_ZNF181_HepG2_ENCSR660ITN_counts_pattern_16.n_138-vs-ZNF181-201.alignment counts-znf_b1h_alignment/ZNF181-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF181-201/pos_patterns.ENCSR115LFG_ChIP_ZNF181_HepG2_ENCSR660ITN_counts_pattern_17.n_135-vs-ZNF181-201.alignment counts-znf_b1h_alignment/ZNF181-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF181-201/pos_patterns.ENCSR115LFG_ChIP_ZNF181_HepG2_ENCSR660ITN_counts_pattern_18.n_101-vs-ZNF181-201.alignment counts-znf_b1h_alignment/ZNF181-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF181-201/pos_patterns.ENCSR115LFG_ChIP_ZNF181_HepG2_ENCSR660ITN_counts_pattern_19.n_97-vs-ZNF181-201.alignment counts-znf_b1h_alignment/ZNF181-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF181-201/pos_patterns.ENCSR115LFG_ChIP_ZNF181_HepG2_ENCSR660ITN_counts_pattern_1.n_1020-vs-ZNF181-201.alignment counts-znf_b1h_alignment/ZNF181-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF181-201/pos_patterns.ENCSR115LFG_ChIP_ZNF181_HepG2_ENCSR660ITN_counts_pattern_20.n_94-vs-ZNF181-201.alignment counts-znf_b1h_alignment/ZNF181-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF181-201/pos_patterns.ENCSR115LFG_ChIP_ZNF181_HepG2_ENCSR660ITN_counts_pattern_21.n_88-vs-ZNF181-201.alignment counts-znf_b1h_alignment/ZNF181-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF181-201/pos_patterns.ENCSR115LFG_ChIP_ZNF181_HepG2_ENCSR660ITN_counts_pattern_22.n_87-vs-ZNF181-201.alignment counts-znf_b1h_alignment/ZNF181-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF181-201/pos_patterns.ENCSR115LFG_ChIP_ZNF181_HepG2_ENCSR660ITN_counts_pattern_23.n_58-vs-ZNF181-201.alignment counts-znf_b1h_alignment/ZNF181-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF181-201/pos_patterns.ENCSR115LFG_ChIP_ZNF181_HepG2_ENCSR660ITN_counts_pattern_24.n_55-vs-ZNF181-201.alignment counts-znf_b1h_alignment/ZNF181-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF181-201/pos_patterns.ENCSR115LFG_ChIP_ZNF181_HepG2_ENCSR660ITN_counts_pattern_25.n_54-vs-ZNF181-201.alignment counts-znf_b1h_alignment/ZNF181-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF181-201/pos_patterns.ENCSR115LFG_ChIP_ZNF181_HepG2_ENCSR660ITN_counts_pattern_26.n_49-vs-ZNF181-201.alignment counts-znf_b1h_alignment/ZNF181-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF181-201/pos_patterns.ENCSR115LFG_ChIP_ZNF181_HepG2_ENCSR660ITN_counts_pattern_27.n_48-vs-ZNF181-201.alignment counts-znf_b1h_alignment/ZNF181-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF181-201/pos_patterns.ENCSR115LFG_ChIP_ZNF181_HepG2_ENCSR660ITN_counts_pattern_28.n_44-vs-ZNF181-201.alignment counts-znf_b1h_alignment/ZNF181-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF181-201/pos_patterns.ENCSR115LFG_ChIP_ZNF181_HepG2_ENCSR660ITN_counts_pattern_29.n_41-vs-ZNF181-201.alignment counts-znf_b1h_alignment/ZNF181-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF181-201/pos_patterns.ENCSR115LFG_ChIP_ZNF181_HepG2_ENCSR660ITN_counts_pattern_2.n_903-vs-ZNF181-201.alignment counts-znf_b1h_alignment/ZNF181-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF181-201/pos_patterns.ENCSR115LFG_ChIP_ZNF181_HepG2_ENCSR660ITN_counts_pattern_30.n_39-vs-ZNF181-201.alignment counts-znf_b1h_alignment/ZNF181-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF181-201/pos_patterns.ENCSR115LFG_ChIP_ZNF181_HepG2_ENCSR660ITN_counts_pattern_31.n_27-vs-ZNF181-201.alignment counts-znf_b1h_alignment/ZNF181-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF181-201/pos_patterns.ENCSR115LFG_ChIP_ZNF181_HepG2_ENCSR660ITN_counts_pattern_32.n_22-vs-ZNF181-201.alignment counts-znf_b1h_alignment/ZNF181-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF181-201/pos_patterns.ENCSR115LFG_ChIP_ZNF181_HepG2_ENCSR660ITN_counts_pattern_3.n_885-vs-ZNF181-201.alignment counts-znf_b1h_alignment/ZNF181-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF181-201/pos_patterns.ENCSR115LFG_ChIP_ZNF181_HepG2_ENCSR660ITN_counts_pattern_4.n_805-vs-ZNF181-201.alignment counts-znf_b1h_alignment/ZNF181-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF181-201/pos_patterns.ENCSR115LFG_ChIP_ZNF181_HepG2_ENCSR660ITN_counts_pattern_5.n_757-vs-ZNF181-201.alignment counts-znf_b1h_alignment/ZNF181-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF181-201/pos_patterns.ENCSR115LFG_ChIP_ZNF181_HepG2_ENCSR660ITN_counts_pattern_6.n_685-vs-ZNF181-201.alignment counts-znf_b1h_alignment/ZNF181-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF181-201/pos_patterns.ENCSR115LFG_ChIP_ZNF181_HepG2_ENCSR660ITN_counts_pattern_7.n_522-vs-ZNF181-201.alignment counts-znf_b1h_alignment/ZNF181-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF181-201/pos_patterns.ENCSR115LFG_ChIP_ZNF181_HepG2_ENCSR660ITN_counts_pattern_8.n_373-vs-ZNF181-201.alignment counts-znf_b1h_alignment/ZNF181-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF181-201/pos_patterns.ENCSR115LFG_ChIP_ZNF181_HepG2_ENCSR660ITN_counts_pattern_9.n_321-vs-ZNF181-201.alignment counts-znf_b1h_alignment/ZNF181-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF18-201/ChipExo_models_ZNF18_counts-pos.pattern_0.n_281-vs-ZNF18-201.alignment counts-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF18-201/ChipExo_models_ZNF18_counts-pos.pattern_1.n_203-vs-ZNF18-201.alignment counts-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF18-201/ChipExo_models_ZNF18_counts-pos.pattern_2.n_167-vs-ZNF18-201.alignment counts-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF18-201/Hughes_GR_models_ZNF18_counts-pos.pattern_0.n_4176-vs-ZNF18-201.alignment counts-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF18-201/Hughes_GR_models_ZNF18_counts-pos.pattern_1.n_114-vs-ZNF18-201.alignment counts-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF18-201/Hughes_GR_models_ZNF18_counts-pos.pattern_2.n_113-vs-ZNF18-201.alignment counts-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF18-201/Hughes_GR_models_ZNF18_counts-pos.pattern_3.n_66-vs-ZNF18-201.alignment counts-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF18-201/Hughes_GR_models_ZNF18_counts-pos.pattern_4.n_37-vs-ZNF18-201.alignment counts-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF18-201/Hughes_GR_models_ZNF18_counts-pos.pattern_5.n_29-vs-ZNF18-201.alignment counts-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR553ZJQ_ChIP_ZNF18_HepG2_ENCSR672NTT_counts_pattern_0.n_3115-vs-ZNF18-201.alignment counts-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR553ZJQ_ChIP_ZNF18_HepG2_ENCSR672NTT_counts_pattern_10.n_169-vs-ZNF18-201.alignment counts-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR553ZJQ_ChIP_ZNF18_HepG2_ENCSR672NTT_counts_pattern_11.n_123-vs-ZNF18-201.alignment counts-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR553ZJQ_ChIP_ZNF18_HepG2_ENCSR672NTT_counts_pattern_12.n_77-vs-ZNF18-201.alignment counts-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR553ZJQ_ChIP_ZNF18_HepG2_ENCSR672NTT_counts_pattern_13.n_21-vs-ZNF18-201.alignment counts-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR553ZJQ_ChIP_ZNF18_HepG2_ENCSR672NTT_counts_pattern_14.n_20-vs-ZNF18-201.alignment counts-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR553ZJQ_ChIP_ZNF18_HepG2_ENCSR672NTT_counts_pattern_1.n_1434-vs-ZNF18-201.alignment counts-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR553ZJQ_ChIP_ZNF18_HepG2_ENCSR672NTT_counts_pattern_2.n_854-vs-ZNF18-201.alignment counts-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR553ZJQ_ChIP_ZNF18_HepG2_ENCSR672NTT_counts_pattern_3.n_772-vs-ZNF18-201.alignment counts-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR553ZJQ_ChIP_ZNF18_HepG2_ENCSR672NTT_counts_pattern_4.n_464-vs-ZNF18-201.alignment counts-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR553ZJQ_ChIP_ZNF18_HepG2_ENCSR672NTT_counts_pattern_5.n_278-vs-ZNF18-201.alignment counts-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR553ZJQ_ChIP_ZNF18_HepG2_ENCSR672NTT_counts_pattern_6.n_269-vs-ZNF18-201.alignment counts-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR553ZJQ_ChIP_ZNF18_HepG2_ENCSR672NTT_counts_pattern_7.n_256-vs-ZNF18-201.alignment counts-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR553ZJQ_ChIP_ZNF18_HepG2_ENCSR672NTT_counts_pattern_8.n_229-vs-ZNF18-201.alignment counts-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR553ZJQ_ChIP_ZNF18_HepG2_ENCSR672NTT_counts_pattern_9.n_192-vs-ZNF18-201.alignment counts-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR977HTH_ChIP_ZNF18_HEK293_ENCSR114LPS_counts_pattern_0.n_8169-vs-ZNF18-201.alignment counts-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR977HTH_ChIP_ZNF18_HEK293_ENCSR114LPS_counts_pattern_1.n_775-vs-ZNF18-201.alignment counts-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR977HTH_ChIP_ZNF18_HEK293_ENCSR114LPS_counts_pattern_2.n_519-vs-ZNF18-201.alignment counts-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR977HTH_ChIP_ZNF18_HEK293_ENCSR114LPS_counts_pattern_3.n_286-vs-ZNF18-201.alignment counts-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR977HTH_ChIP_ZNF18_HEK293_ENCSR114LPS_counts_pattern_4.n_91-vs-ZNF18-201.alignment counts-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF182-201/ChipExo_models_ZNF182_counts-pos.pattern_0.n_4230-vs-ZNF182-201.alignment counts-znf_b1h_alignment/ZNF182-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF182-201/ChipExo_models_ZNF182_counts-pos.pattern_1.n_1335-vs-ZNF182-201.alignment counts-znf_b1h_alignment/ZNF182-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF182-201/ChipExo_models_ZNF182_counts-pos.pattern_2.n_417-vs-ZNF182-201.alignment counts-znf_b1h_alignment/ZNF182-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF182-201/ChipExo_models_ZNF182_counts-pos.pattern_3.n_73-vs-ZNF182-201.alignment counts-znf_b1h_alignment/ZNF182-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF182-201/ChipExo_models_ZNF182_counts-pos.pattern_4.n_56-vs-ZNF182-201.alignment counts-znf_b1h_alignment/ZNF182-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/ChipExo_models_ZNF184_counts-pos.pattern_0.n_168-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/ChipExo_models_ZNF184_counts-pos.pattern_1.n_164-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/Hughes_GR_models_ZNF184_counts-pos.pattern_0.n_31-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/Hughes_GR_models_ZNF184_counts-pos.pattern_1.n_28-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR020UPN_ChIP_ZNF184_HEK293_ENCSR263RCM_counts_pattern_0.n_2850-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR020UPN_ChIP_ZNF184_HEK293_ENCSR263RCM_counts_pattern_1.n_1314-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR020UPN_ChIP_ZNF184_HEK293_ENCSR263RCM_counts_pattern_2.n_1308-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR020UPN_ChIP_ZNF184_HEK293_ENCSR263RCM_counts_pattern_3.n_1107-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR020UPN_ChIP_ZNF184_HEK293_ENCSR263RCM_counts_pattern_4.n_240-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR020UPN_ChIP_ZNF184_HEK293_ENCSR263RCM_counts_pattern_5.n_82-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR020UPN_ChIP_ZNF184_HEK293_ENCSR263RCM_counts_pattern_6.n_75-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR020UPN_ChIP_ZNF184_HEK293_ENCSR263RCM_counts_pattern_7.n_23-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR020UPN_ChIP_ZNF184_HEK293_ENCSR263RCM_counts_pattern_8.n_20-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR526HRN_ChIP_ZNF184_K562_ENCSR322UJZ_counts_pattern_0.n_240-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR526HRN_ChIP_ZNF184_K562_ENCSR322UJZ_counts_pattern_1.n_186-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR526HRN_ChIP_ZNF184_K562_ENCSR322UJZ_counts_pattern_2.n_108-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR526HRN_ChIP_ZNF184_K562_ENCSR322UJZ_counts_pattern_3.n_26-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR546IHU_ChIP_ZNF184_K562_ENCSR869HTL_counts_pattern_0.n_1617-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR546IHU_ChIP_ZNF184_K562_ENCSR869HTL_counts_pattern_1.n_826-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR546IHU_ChIP_ZNF184_K562_ENCSR869HTL_counts_pattern_2.n_479-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR546IHU_ChIP_ZNF184_K562_ENCSR869HTL_counts_pattern_3.n_417-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR546IHU_ChIP_ZNF184_K562_ENCSR869HTL_counts_pattern_4.n_276-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR546IHU_ChIP_ZNF184_K562_ENCSR869HTL_counts_pattern_5.n_68-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR546IHU_ChIP_ZNF184_K562_ENCSR869HTL_counts_pattern_6.n_67-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR546IHU_ChIP_ZNF184_K562_ENCSR869HTL_counts_pattern_7.n_47-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR546IHU_ChIP_ZNF184_K562_ENCSR869HTL_counts_pattern_8.n_40-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR546IHU_ChIP_ZNF184_K562_ENCSR869HTL_counts_pattern_9.n_33-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR621ATC_ChIP_ZNF184_K562_ENCSR229FNP_counts_pattern_0.n_1580-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR621ATC_ChIP_ZNF184_K562_ENCSR229FNP_counts_pattern_10.n_206-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR621ATC_ChIP_ZNF184_K562_ENCSR229FNP_counts_pattern_11.n_130-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR621ATC_ChIP_ZNF184_K562_ENCSR229FNP_counts_pattern_12.n_30-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR621ATC_ChIP_ZNF184_K562_ENCSR229FNP_counts_pattern_1.n_1338-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR621ATC_ChIP_ZNF184_K562_ENCSR229FNP_counts_pattern_2.n_836-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR621ATC_ChIP_ZNF184_K562_ENCSR229FNP_counts_pattern_3.n_808-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR621ATC_ChIP_ZNF184_K562_ENCSR229FNP_counts_pattern_4.n_567-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR621ATC_ChIP_ZNF184_K562_ENCSR229FNP_counts_pattern_5.n_467-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR621ATC_ChIP_ZNF184_K562_ENCSR229FNP_counts_pattern_6.n_446-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR621ATC_ChIP_ZNF184_K562_ENCSR229FNP_counts_pattern_7.n_406-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR621ATC_ChIP_ZNF184_K562_ENCSR229FNP_counts_pattern_8.n_326-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR621ATC_ChIP_ZNF184_K562_ENCSR229FNP_counts_pattern_9.n_261-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR640STN_ChIP_ZNF184_WTC11_ENCSR901OTZ_counts_pattern_0.n_2387-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR640STN_ChIP_ZNF184_WTC11_ENCSR901OTZ_counts_pattern_1.n_907-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR640STN_ChIP_ZNF184_WTC11_ENCSR901OTZ_counts_pattern_2.n_881-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR640STN_ChIP_ZNF184_WTC11_ENCSR901OTZ_counts_pattern_3.n_423-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR640STN_ChIP_ZNF184_WTC11_ENCSR901OTZ_counts_pattern_4.n_237-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR640STN_ChIP_ZNF184_WTC11_ENCSR901OTZ_counts_pattern_5.n_212-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR640STN_ChIP_ZNF184_WTC11_ENCSR901OTZ_counts_pattern_6.n_163-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR640STN_ChIP_ZNF184_WTC11_ENCSR901OTZ_counts_pattern_7.n_35-vs-ZNF184-201.alignment counts-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF189-201/ChipExo_models_ZNF189_counts-pos.pattern_0.n_3184-vs-ZNF189-201.alignment counts-znf_b1h_alignment/ZNF189-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF189-201/ChipExo_models_ZNF189_counts-pos.pattern_1.n_44-vs-ZNF189-201.alignment counts-znf_b1h_alignment/ZNF189-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF189-201/ChipExo_models_ZNF189_counts-pos.pattern_2.n_30-vs-ZNF189-201.alignment counts-znf_b1h_alignment/ZNF189-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF189-201/Hughes_NB_models_ZNF189_counts-pos.pattern_0.n_7565-vs-ZNF189-201.alignment counts-znf_b1h_alignment/ZNF189-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF189-201/Hughes_NB_models_ZNF189_counts-pos.pattern_1.n_1069-vs-ZNF189-201.alignment counts-znf_b1h_alignment/ZNF189-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF189-201/Hughes_NB_models_ZNF189_counts-pos.pattern_2.n_87-vs-ZNF189-201.alignment counts-znf_b1h_alignment/ZNF189-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF189-201/Hughes_NB_models_ZNF189_counts-pos.pattern_3.n_80-vs-ZNF189-201.alignment counts-znf_b1h_alignment/ZNF189-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF189-201/Hughes_NB_models_ZNF189_counts-pos.pattern_4.n_70-vs-ZNF189-201.alignment counts-znf_b1h_alignment/ZNF189-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF189-201/Hughes_NB_models_ZNF189_counts-pos.pattern_5.n_49-vs-ZNF189-201.alignment counts-znf_b1h_alignment/ZNF189-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF189-201/Hughes_NB_models_ZNF189_counts-pos.pattern_6.n_41-vs-ZNF189-201.alignment counts-znf_b1h_alignment/ZNF189-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF189-201/Hughes_NB_models_ZNF189_counts-pos.pattern_7.n_21-vs-ZNF189-201.alignment counts-znf_b1h_alignment/ZNF189-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF189-201/pos_patterns.ENCSR163RYW_ChIP_ZNF189_HEK293_ENCSR177YND_counts_pattern_0.n_14927-vs-ZNF189-201.alignment counts-znf_b1h_alignment/ZNF189-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF189-201/pos_patterns.ENCSR163RYW_ChIP_ZNF189_HEK293_ENCSR177YND_counts_pattern_10.n_37-vs-ZNF189-201.alignment counts-znf_b1h_alignment/ZNF189-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF189-201/pos_patterns.ENCSR163RYW_ChIP_ZNF189_HEK293_ENCSR177YND_counts_pattern_11.n_36-vs-ZNF189-201.alignment counts-znf_b1h_alignment/ZNF189-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF189-201/pos_patterns.ENCSR163RYW_ChIP_ZNF189_HEK293_ENCSR177YND_counts_pattern_12.n_36-vs-ZNF189-201.alignment counts-znf_b1h_alignment/ZNF189-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF189-201/pos_patterns.ENCSR163RYW_ChIP_ZNF189_HEK293_ENCSR177YND_counts_pattern_13.n_33-vs-ZNF189-201.alignment counts-znf_b1h_alignment/ZNF189-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF189-201/pos_patterns.ENCSR163RYW_ChIP_ZNF189_HEK293_ENCSR177YND_counts_pattern_14.n_29-vs-ZNF189-201.alignment counts-znf_b1h_alignment/ZNF189-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF189-201/pos_patterns.ENCSR163RYW_ChIP_ZNF189_HEK293_ENCSR177YND_counts_pattern_15.n_23-vs-ZNF189-201.alignment counts-znf_b1h_alignment/ZNF189-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF189-201/pos_patterns.ENCSR163RYW_ChIP_ZNF189_HEK293_ENCSR177YND_counts_pattern_16.n_21-vs-ZNF189-201.alignment counts-znf_b1h_alignment/ZNF189-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF189-201/pos_patterns.ENCSR163RYW_ChIP_ZNF189_HEK293_ENCSR177YND_counts_pattern_17.n_21-vs-ZNF189-201.alignment counts-znf_b1h_alignment/ZNF189-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF189-201/pos_patterns.ENCSR163RYW_ChIP_ZNF189_HEK293_ENCSR177YND_counts_pattern_1.n_3190-vs-ZNF189-201.alignment counts-znf_b1h_alignment/ZNF189-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF189-201/pos_patterns.ENCSR163RYW_ChIP_ZNF189_HEK293_ENCSR177YND_counts_pattern_2.n_2641-vs-ZNF189-201.alignment counts-znf_b1h_alignment/ZNF189-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF189-201/pos_patterns.ENCSR163RYW_ChIP_ZNF189_HEK293_ENCSR177YND_counts_pattern_3.n_1631-vs-ZNF189-201.alignment counts-znf_b1h_alignment/ZNF189-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF189-201/pos_patterns.ENCSR163RYW_ChIP_ZNF189_HEK293_ENCSR177YND_counts_pattern_4.n_942-vs-ZNF189-201.alignment counts-znf_b1h_alignment/ZNF189-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF189-201/pos_patterns.ENCSR163RYW_ChIP_ZNF189_HEK293_ENCSR177YND_counts_pattern_5.n_318-vs-ZNF189-201.alignment counts-znf_b1h_alignment/ZNF189-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF189-201/pos_patterns.ENCSR163RYW_ChIP_ZNF189_HEK293_ENCSR177YND_counts_pattern_6.n_237-vs-ZNF189-201.alignment counts-znf_b1h_alignment/ZNF189-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF189-201/pos_patterns.ENCSR163RYW_ChIP_ZNF189_HEK293_ENCSR177YND_counts_pattern_7.n_120-vs-ZNF189-201.alignment counts-znf_b1h_alignment/ZNF189-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF189-201/pos_patterns.ENCSR163RYW_ChIP_ZNF189_HEK293_ENCSR177YND_counts_pattern_8.n_79-vs-ZNF189-201.alignment counts-znf_b1h_alignment/ZNF189-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF189-201/pos_patterns.ENCSR163RYW_ChIP_ZNF189_HEK293_ENCSR177YND_counts_pattern_9.n_38-vs-ZNF189-201.alignment counts-znf_b1h_alignment/ZNF189-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF19-201/ChipExo_models_ZNF19_counts-pos.pattern_0.n_435-vs-ZNF19-201.alignment counts-znf_b1h_alignment/ZNF19-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF19-201/ChipExo_models_ZNF19_counts-pos.pattern_1.n_120-vs-ZNF19-201.alignment counts-znf_b1h_alignment/ZNF19-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF19-201/pos_patterns.ENCSR811JJM_ChIP_ZNF19_HEK293_ENCSR098YTO_counts_pattern_0.n_1379-vs-ZNF19-201.alignment counts-znf_b1h_alignment/ZNF19-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF19-201/pos_patterns.ENCSR811JJM_ChIP_ZNF19_HEK293_ENCSR098YTO_counts_pattern_1.n_341-vs-ZNF19-201.alignment counts-znf_b1h_alignment/ZNF19-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF19-201/pos_patterns.ENCSR811JJM_ChIP_ZNF19_HEK293_ENCSR098YTO_counts_pattern_2.n_123-vs-ZNF19-201.alignment counts-znf_b1h_alignment/ZNF19-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF197-202/ChipExo_models_ZNF197_counts-pos.pattern_0.n_524-vs-ZNF197-202.alignment counts-znf_b1h_alignment/ZNF197-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF197-202/ChipExo_models_ZNF197_counts-pos.pattern_1.n_87-vs-ZNF197-202.alignment counts-znf_b1h_alignment/ZNF197-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF197-202/ChipExo_models_ZNF197_counts-pos.pattern_2.n_60-vs-ZNF197-202.alignment counts-znf_b1h_alignment/ZNF197-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF197-202/ChipExo_models_ZNF197_counts-pos.pattern_3.n_56-vs-ZNF197-202.alignment counts-znf_b1h_alignment/ZNF197-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF197-202/ChipExo_models_ZNF197_counts-pos.pattern_4.n_48-vs-ZNF197-202.alignment counts-znf_b1h_alignment/ZNF197-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF197-202/ChipExo_models_ZNF197_counts-pos.pattern_5.n_47-vs-ZNF197-202.alignment counts-znf_b1h_alignment/ZNF197-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF197-202/ChipExo_models_ZNF197_counts-pos.pattern_6.n_42-vs-ZNF197-202.alignment counts-znf_b1h_alignment/ZNF197-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF197-202/ChipExo_models_ZNF197_counts-pos.pattern_7.n_26-vs-ZNF197-202.alignment counts-znf_b1h_alignment/ZNF197-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF197-202/pos_patterns.ENCSR580IAO_ChIP_ZNF197_K562_ENCSR964AWU_counts_pattern_0.n_2555-vs-ZNF197-202.alignment counts-znf_b1h_alignment/ZNF197-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF197-202/pos_patterns.ENCSR580IAO_ChIP_ZNF197_K562_ENCSR964AWU_counts_pattern_1.n_1043-vs-ZNF197-202.alignment counts-znf_b1h_alignment/ZNF197-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF197-202/pos_patterns.ENCSR580IAO_ChIP_ZNF197_K562_ENCSR964AWU_counts_pattern_2.n_634-vs-ZNF197-202.alignment counts-znf_b1h_alignment/ZNF197-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF197-202/pos_patterns.ENCSR580IAO_ChIP_ZNF197_K562_ENCSR964AWU_counts_pattern_3.n_485-vs-ZNF197-202.alignment counts-znf_b1h_alignment/ZNF197-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF197-202/pos_patterns.ENCSR580IAO_ChIP_ZNF197_K562_ENCSR964AWU_counts_pattern_4.n_242-vs-ZNF197-202.alignment counts-znf_b1h_alignment/ZNF197-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF197-202/pos_patterns.ENCSR580IAO_ChIP_ZNF197_K562_ENCSR964AWU_counts_pattern_5.n_209-vs-ZNF197-202.alignment counts-znf_b1h_alignment/ZNF197-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF197-202/pos_patterns.ENCSR580IAO_ChIP_ZNF197_K562_ENCSR964AWU_counts_pattern_6.n_115-vs-ZNF197-202.alignment counts-znf_b1h_alignment/ZNF197-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF197-202/pos_patterns.ENCSR580IAO_ChIP_ZNF197_K562_ENCSR964AWU_counts_pattern_7.n_112-vs-ZNF197-202.alignment counts-znf_b1h_alignment/ZNF197-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF197-202/pos_patterns.ENCSR580IAO_ChIP_ZNF197_K562_ENCSR964AWU_counts_pattern_8.n_22-vs-ZNF197-202.alignment counts-znf_b1h_alignment/ZNF197-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF197-202/pos_patterns.ENCSR580IAO_ChIP_ZNF197_K562_ENCSR964AWU_counts_pattern_9.n_22-vs-ZNF197-202.alignment counts-znf_b1h_alignment/ZNF197-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF200-201/Hughes_NB_models_ZNF200_counts-pos.pattern_0.n_209-vs-ZNF200-201.alignment counts-znf_b1h_alignment/ZNF200-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF200-201/Hughes_NB_models_ZNF200_counts-pos.pattern_1.n_76-vs-ZNF200-201.alignment counts-znf_b1h_alignment/ZNF200-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF200-201/Hughes_NB_models_ZNF200_counts-pos.pattern_2.n_63-vs-ZNF200-201.alignment counts-znf_b1h_alignment/ZNF200-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF200-201/Hughes_NB_models_ZNF200_counts-pos.pattern_3.n_61-vs-ZNF200-201.alignment counts-znf_b1h_alignment/ZNF200-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF200-201/Hughes_NB_models_ZNF200_counts-pos.pattern_4.n_55-vs-ZNF200-201.alignment counts-znf_b1h_alignment/ZNF200-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF200-201/Hughes_NB_models_ZNF200_counts-pos.pattern_5.n_51-vs-ZNF200-201.alignment counts-znf_b1h_alignment/ZNF200-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF200-201/Hughes_NB_models_ZNF200_counts-pos.pattern_6.n_48-vs-ZNF200-201.alignment counts-znf_b1h_alignment/ZNF200-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF20-201/pos_patterns.ENCSR720PDY_ChIP_ZNF20_HepG2_ENCSR794XBB_counts_pattern_0.n_710-vs-ZNF20-201.alignment counts-znf_b1h_alignment/ZNF20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF20-201/pos_patterns.ENCSR720PDY_ChIP_ZNF20_HepG2_ENCSR794XBB_counts_pattern_10.n_67-vs-ZNF20-201.alignment counts-znf_b1h_alignment/ZNF20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF20-201/pos_patterns.ENCSR720PDY_ChIP_ZNF20_HepG2_ENCSR794XBB_counts_pattern_11.n_51-vs-ZNF20-201.alignment counts-znf_b1h_alignment/ZNF20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF20-201/pos_patterns.ENCSR720PDY_ChIP_ZNF20_HepG2_ENCSR794XBB_counts_pattern_12.n_43-vs-ZNF20-201.alignment counts-znf_b1h_alignment/ZNF20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF20-201/pos_patterns.ENCSR720PDY_ChIP_ZNF20_HepG2_ENCSR794XBB_counts_pattern_13.n_25-vs-ZNF20-201.alignment counts-znf_b1h_alignment/ZNF20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF20-201/pos_patterns.ENCSR720PDY_ChIP_ZNF20_HepG2_ENCSR794XBB_counts_pattern_1.n_592-vs-ZNF20-201.alignment counts-znf_b1h_alignment/ZNF20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF20-201/pos_patterns.ENCSR720PDY_ChIP_ZNF20_HepG2_ENCSR794XBB_counts_pattern_2.n_307-vs-ZNF20-201.alignment counts-znf_b1h_alignment/ZNF20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF20-201/pos_patterns.ENCSR720PDY_ChIP_ZNF20_HepG2_ENCSR794XBB_counts_pattern_3.n_294-vs-ZNF20-201.alignment counts-znf_b1h_alignment/ZNF20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF20-201/pos_patterns.ENCSR720PDY_ChIP_ZNF20_HepG2_ENCSR794XBB_counts_pattern_4.n_248-vs-ZNF20-201.alignment counts-znf_b1h_alignment/ZNF20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF20-201/pos_patterns.ENCSR720PDY_ChIP_ZNF20_HepG2_ENCSR794XBB_counts_pattern_5.n_208-vs-ZNF20-201.alignment counts-znf_b1h_alignment/ZNF20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF20-201/pos_patterns.ENCSR720PDY_ChIP_ZNF20_HepG2_ENCSR794XBB_counts_pattern_6.n_205-vs-ZNF20-201.alignment counts-znf_b1h_alignment/ZNF20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF20-201/pos_patterns.ENCSR720PDY_ChIP_ZNF20_HepG2_ENCSR794XBB_counts_pattern_7.n_174-vs-ZNF20-201.alignment counts-znf_b1h_alignment/ZNF20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF20-201/pos_patterns.ENCSR720PDY_ChIP_ZNF20_HepG2_ENCSR794XBB_counts_pattern_8.n_166-vs-ZNF20-201.alignment counts-znf_b1h_alignment/ZNF20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF20-201/pos_patterns.ENCSR720PDY_ChIP_ZNF20_HepG2_ENCSR794XBB_counts_pattern_9.n_104-vs-ZNF20-201.alignment counts-znf_b1h_alignment/ZNF20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF202-201/ChipExo_models_ZNF202_counts-pos.pattern_0.n_2232-vs-ZNF202-201.alignment counts-znf_b1h_alignment/ZNF202-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF202-201/ChipExo_models_ZNF202_counts-pos.pattern_1.n_2144-vs-ZNF202-201.alignment counts-znf_b1h_alignment/ZNF202-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF202-201/ChipExo_models_ZNF202_counts-pos.pattern_2.n_1348-vs-ZNF202-201.alignment counts-znf_b1h_alignment/ZNF202-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF202-201/ChipExo_models_ZNF202_counts-pos.pattern_3.n_1238-vs-ZNF202-201.alignment counts-znf_b1h_alignment/ZNF202-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF202-201/ChipExo_models_ZNF202_counts-pos.pattern_4.n_935-vs-ZNF202-201.alignment counts-znf_b1h_alignment/ZNF202-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF202-201/ChipExo_models_ZNF202_counts-pos.pattern_5.n_520-vs-ZNF202-201.alignment counts-znf_b1h_alignment/ZNF202-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF202-201/neg_patterns.ENCSR996FYT_ChIP_ZNF202_HEK293_ENCSR639ETZ_counts_pattern_0.n_31-vs-ZNF202-201.alignment counts-znf_b1h_alignment/ZNF202-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF202-201/neg_patterns.ENCSR996FYT_ChIP_ZNF202_HEK293_ENCSR639ETZ_counts_pattern_1.n_27-vs-ZNF202-201.alignment counts-znf_b1h_alignment/ZNF202-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF202-201/neg_patterns.ENCSR996FYT_ChIP_ZNF202_HEK293_ENCSR639ETZ_counts_pattern_2.n_23-vs-ZNF202-201.alignment counts-znf_b1h_alignment/ZNF202-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF202-201/neg_patterns.ENCSR996FYT_ChIP_ZNF202_HEK293_ENCSR639ETZ_counts_pattern_3.n_20-vs-ZNF202-201.alignment counts-znf_b1h_alignment/ZNF202-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF202-201/pos_patterns.ENCSR996FYT_ChIP_ZNF202_HEK293_ENCSR639ETZ_counts_pattern_0.n_2709-vs-ZNF202-201.alignment counts-znf_b1h_alignment/ZNF202-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF202-201/pos_patterns.ENCSR996FYT_ChIP_ZNF202_HEK293_ENCSR639ETZ_counts_pattern_1.n_303-vs-ZNF202-201.alignment counts-znf_b1h_alignment/ZNF202-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF202-201/pos_patterns.ENCSR996FYT_ChIP_ZNF202_HEK293_ENCSR639ETZ_counts_pattern_2.n_292-vs-ZNF202-201.alignment counts-znf_b1h_alignment/ZNF202-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF202-201/pos_patterns.ENCSR996FYT_ChIP_ZNF202_HEK293_ENCSR639ETZ_counts_pattern_3.n_170-vs-ZNF202-201.alignment counts-znf_b1h_alignment/ZNF202-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF202-201/pos_patterns.ENCSR996FYT_ChIP_ZNF202_HEK293_ENCSR639ETZ_counts_pattern_4.n_152-vs-ZNF202-201.alignment counts-znf_b1h_alignment/ZNF202-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF202-201/pos_patterns.ENCSR996FYT_ChIP_ZNF202_HEK293_ENCSR639ETZ_counts_pattern_5.n_114-vs-ZNF202-201.alignment counts-znf_b1h_alignment/ZNF202-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF202-201/pos_patterns.ENCSR996FYT_ChIP_ZNF202_HEK293_ENCSR639ETZ_counts_pattern_6.n_73-vs-ZNF202-201.alignment counts-znf_b1h_alignment/ZNF202-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF202-201/pos_patterns.ENCSR996FYT_ChIP_ZNF202_HEK293_ENCSR639ETZ_counts_pattern_7.n_31-vs-ZNF202-201.alignment counts-znf_b1h_alignment/ZNF202-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF202-201/pos_patterns.ENCSR996FYT_ChIP_ZNF202_HEK293_ENCSR639ETZ_counts_pattern_8.n_31-vs-ZNF202-201.alignment counts-znf_b1h_alignment/ZNF202-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF202-201/pos_patterns.ENCSR996FYT_ChIP_ZNF202_HEK293_ENCSR639ETZ_counts_pattern_9.n_27-vs-ZNF202-201.alignment counts-znf_b1h_alignment/ZNF202-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF205-201/ChipExo_models_ZNF205_counts-pos.pattern_0.n_132-vs-ZNF205-201.alignment counts-znf_b1h_alignment/ZNF205-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF205-201/pos_patterns.ENCSR157CEN_ChIP_ZNF205_HepG2_ENCSR574PLQ_counts_pattern_0.n_3318-vs-ZNF205-201.alignment counts-znf_b1h_alignment/ZNF205-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF205-201/pos_patterns.ENCSR157CEN_ChIP_ZNF205_HepG2_ENCSR574PLQ_counts_pattern_10.n_236-vs-ZNF205-201.alignment counts-znf_b1h_alignment/ZNF205-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF205-201/pos_patterns.ENCSR157CEN_ChIP_ZNF205_HepG2_ENCSR574PLQ_counts_pattern_11.n_236-vs-ZNF205-201.alignment counts-znf_b1h_alignment/ZNF205-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF205-201/pos_patterns.ENCSR157CEN_ChIP_ZNF205_HepG2_ENCSR574PLQ_counts_pattern_12.n_161-vs-ZNF205-201.alignment counts-znf_b1h_alignment/ZNF205-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF205-201/pos_patterns.ENCSR157CEN_ChIP_ZNF205_HepG2_ENCSR574PLQ_counts_pattern_13.n_150-vs-ZNF205-201.alignment counts-znf_b1h_alignment/ZNF205-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF205-201/pos_patterns.ENCSR157CEN_ChIP_ZNF205_HepG2_ENCSR574PLQ_counts_pattern_14.n_144-vs-ZNF205-201.alignment counts-znf_b1h_alignment/ZNF205-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF205-201/pos_patterns.ENCSR157CEN_ChIP_ZNF205_HepG2_ENCSR574PLQ_counts_pattern_15.n_140-vs-ZNF205-201.alignment counts-znf_b1h_alignment/ZNF205-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF205-201/pos_patterns.ENCSR157CEN_ChIP_ZNF205_HepG2_ENCSR574PLQ_counts_pattern_16.n_37-vs-ZNF205-201.alignment counts-znf_b1h_alignment/ZNF205-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF205-201/pos_patterns.ENCSR157CEN_ChIP_ZNF205_HepG2_ENCSR574PLQ_counts_pattern_17.n_27-vs-ZNF205-201.alignment counts-znf_b1h_alignment/ZNF205-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF205-201/pos_patterns.ENCSR157CEN_ChIP_ZNF205_HepG2_ENCSR574PLQ_counts_pattern_1.n_1863-vs-ZNF205-201.alignment counts-znf_b1h_alignment/ZNF205-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF205-201/pos_patterns.ENCSR157CEN_ChIP_ZNF205_HepG2_ENCSR574PLQ_counts_pattern_2.n_1859-vs-ZNF205-201.alignment counts-znf_b1h_alignment/ZNF205-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF205-201/pos_patterns.ENCSR157CEN_ChIP_ZNF205_HepG2_ENCSR574PLQ_counts_pattern_3.n_1158-vs-ZNF205-201.alignment counts-znf_b1h_alignment/ZNF205-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF205-201/pos_patterns.ENCSR157CEN_ChIP_ZNF205_HepG2_ENCSR574PLQ_counts_pattern_4.n_1085-vs-ZNF205-201.alignment counts-znf_b1h_alignment/ZNF205-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF205-201/pos_patterns.ENCSR157CEN_ChIP_ZNF205_HepG2_ENCSR574PLQ_counts_pattern_5.n_545-vs-ZNF205-201.alignment counts-znf_b1h_alignment/ZNF205-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF205-201/pos_patterns.ENCSR157CEN_ChIP_ZNF205_HepG2_ENCSR574PLQ_counts_pattern_6.n_478-vs-ZNF205-201.alignment counts-znf_b1h_alignment/ZNF205-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF205-201/pos_patterns.ENCSR157CEN_ChIP_ZNF205_HepG2_ENCSR574PLQ_counts_pattern_7.n_395-vs-ZNF205-201.alignment counts-znf_b1h_alignment/ZNF205-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF205-201/pos_patterns.ENCSR157CEN_ChIP_ZNF205_HepG2_ENCSR574PLQ_counts_pattern_8.n_348-vs-ZNF205-201.alignment counts-znf_b1h_alignment/ZNF205-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF205-201/pos_patterns.ENCSR157CEN_ChIP_ZNF205_HepG2_ENCSR574PLQ_counts_pattern_9.n_327-vs-ZNF205-201.alignment counts-znf_b1h_alignment/ZNF205-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF211-201/ChipExo_models_ZNF211_counts-pos.pattern_0.n_172-vs-ZNF211-201.alignment counts-znf_b1h_alignment/ZNF211-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF211-201/ChipExo_models_ZNF211_counts-pos.pattern_10.n_25-vs-ZNF211-201.alignment counts-znf_b1h_alignment/ZNF211-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF211-201/ChipExo_models_ZNF211_counts-pos.pattern_1.n_160-vs-ZNF211-201.alignment counts-znf_b1h_alignment/ZNF211-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF211-201/ChipExo_models_ZNF211_counts-pos.pattern_2.n_151-vs-ZNF211-201.alignment counts-znf_b1h_alignment/ZNF211-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF211-201/ChipExo_models_ZNF211_counts-pos.pattern_3.n_118-vs-ZNF211-201.alignment counts-znf_b1h_alignment/ZNF211-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF211-201/ChipExo_models_ZNF211_counts-pos.pattern_4.n_117-vs-ZNF211-201.alignment counts-znf_b1h_alignment/ZNF211-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF211-201/ChipExo_models_ZNF211_counts-pos.pattern_5.n_99-vs-ZNF211-201.alignment counts-znf_b1h_alignment/ZNF211-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF211-201/ChipExo_models_ZNF211_counts-pos.pattern_6.n_87-vs-ZNF211-201.alignment counts-znf_b1h_alignment/ZNF211-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF211-201/ChipExo_models_ZNF211_counts-pos.pattern_7.n_85-vs-ZNF211-201.alignment counts-znf_b1h_alignment/ZNF211-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF211-201/ChipExo_models_ZNF211_counts-pos.pattern_8.n_77-vs-ZNF211-201.alignment counts-znf_b1h_alignment/ZNF211-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF211-201/ChipExo_models_ZNF211_counts-pos.pattern_9.n_66-vs-ZNF211-201.alignment counts-znf_b1h_alignment/ZNF211-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF211-201/pos_patterns.ENCSR365DQH_ChIP_ZNF211_HEK293_ENCSR520DWU_counts_pattern_0.n_1117-vs-ZNF211-201.alignment counts-znf_b1h_alignment/ZNF211-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF211-201/pos_patterns.ENCSR365DQH_ChIP_ZNF211_HEK293_ENCSR520DWU_counts_pattern_1.n_73-vs-ZNF211-201.alignment counts-znf_b1h_alignment/ZNF211-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF211-201/pos_patterns.ENCSR365DQH_ChIP_ZNF211_HEK293_ENCSR520DWU_counts_pattern_2.n_68-vs-ZNF211-201.alignment counts-znf_b1h_alignment/ZNF211-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF211-201/pos_patterns.ENCSR365DQH_ChIP_ZNF211_HEK293_ENCSR520DWU_counts_pattern_3.n_48-vs-ZNF211-201.alignment counts-znf_b1h_alignment/ZNF211-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF211-201/pos_patterns.ENCSR365DQH_ChIP_ZNF211_HEK293_ENCSR520DWU_counts_pattern_4.n_40-vs-ZNF211-201.alignment counts-znf_b1h_alignment/ZNF211-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF212-201/ChipExo_models_ZNF212_counts-pos.pattern_0.n_106-vs-ZNF212-201.alignment counts-znf_b1h_alignment/ZNF212-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF212-201/ChipExo_models_ZNF212_counts-pos.pattern_1.n_45-vs-ZNF212-201.alignment counts-znf_b1h_alignment/ZNF212-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF212-201/pos_patterns.ENCSR002ZGC_ChIP_ZNF212_K562_ENCSR601LYN_counts_pattern_0.n_406-vs-ZNF212-201.alignment counts-znf_b1h_alignment/ZNF212-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF212-201/pos_patterns.ENCSR002ZGC_ChIP_ZNF212_K562_ENCSR601LYN_counts_pattern_1.n_394-vs-ZNF212-201.alignment counts-znf_b1h_alignment/ZNF212-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF212-201/pos_patterns.ENCSR002ZGC_ChIP_ZNF212_K562_ENCSR601LYN_counts_pattern_2.n_46-vs-ZNF212-201.alignment counts-znf_b1h_alignment/ZNF212-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF212-201/pos_patterns.ENCSR002ZGC_ChIP_ZNF212_K562_ENCSR601LYN_counts_pattern_3.n_35-vs-ZNF212-201.alignment counts-znf_b1h_alignment/ZNF212-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF212-201/pos_patterns.ENCSR002ZGC_ChIP_ZNF212_K562_ENCSR601LYN_counts_pattern_4.n_33-vs-ZNF212-201.alignment counts-znf_b1h_alignment/ZNF212-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF212-201/pos_patterns.ENCSR002ZGC_ChIP_ZNF212_K562_ENCSR601LYN_counts_pattern_5.n_32-vs-ZNF212-201.alignment counts-znf_b1h_alignment/ZNF212-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF212-201/pos_patterns.ENCSR002ZGC_ChIP_ZNF212_K562_ENCSR601LYN_counts_pattern_6.n_30-vs-ZNF212-201.alignment counts-znf_b1h_alignment/ZNF212-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF212-201/pos_patterns.ENCSR002ZGC_ChIP_ZNF212_K562_ENCSR601LYN_counts_pattern_7.n_20-vs-ZNF212-201.alignment counts-znf_b1h_alignment/ZNF212-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF213-201/Hughes_GR_models_ZNF213_counts-pos.pattern_0.n_111-vs-ZNF213-201.alignment counts-znf_b1h_alignment/ZNF213-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF213-201/Hughes_GR_models_ZNF213_counts-pos.pattern_1.n_49-vs-ZNF213-201.alignment counts-znf_b1h_alignment/ZNF213-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF213-201/Hughes_GR_models_ZNF213_counts-pos.pattern_2.n_34-vs-ZNF213-201.alignment counts-znf_b1h_alignment/ZNF213-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF213-201/Hughes_GR_models_ZNF213_counts-pos.pattern_3.n_26-vs-ZNF213-201.alignment counts-znf_b1h_alignment/ZNF213-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF214-201/ChipExo_models_ZNF214_counts-pos.pattern_0.n_132-vs-ZNF214-201.alignment counts-znf_b1h_alignment/ZNF214-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF214-201/Hughes_GR_models_ZNF214_counts-pos.pattern_0.n_37-vs-ZNF214-201.alignment counts-znf_b1h_alignment/ZNF214-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF214-201/Hughes_GR_models_ZNF214_counts-pos.pattern_1.n_36-vs-ZNF214-201.alignment counts-znf_b1h_alignment/ZNF214-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF214-201/Hughes_GR_models_ZNF214_counts-pos.pattern_2.n_23-vs-ZNF214-201.alignment counts-znf_b1h_alignment/ZNF214-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF214-201/pos_patterns.ENCSR993DED_ChIP_ZNF214_HEK293_ENCSR054SSY_counts_pattern_0.n_672-vs-ZNF214-201.alignment counts-znf_b1h_alignment/ZNF214-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF214-201/pos_patterns.ENCSR993DED_ChIP_ZNF214_HEK293_ENCSR054SSY_counts_pattern_1.n_329-vs-ZNF214-201.alignment counts-znf_b1h_alignment/ZNF214-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF214-201/pos_patterns.ENCSR993DED_ChIP_ZNF214_HEK293_ENCSR054SSY_counts_pattern_2.n_282-vs-ZNF214-201.alignment counts-znf_b1h_alignment/ZNF214-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF214-201/pos_patterns.ENCSR993DED_ChIP_ZNF214_HEK293_ENCSR054SSY_counts_pattern_3.n_31-vs-ZNF214-201.alignment counts-znf_b1h_alignment/ZNF214-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF214-201/pos_patterns.ENCSR993DED_ChIP_ZNF214_HEK293_ENCSR054SSY_counts_pattern_4.n_26-vs-ZNF214-201.alignment counts-znf_b1h_alignment/ZNF214-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF215-201/neg_patterns.ENCSR699RWG_ChIP_ZNF215_K562_ENCSR767YTG_counts_pattern_0.n_44-vs-ZNF215-201.alignment counts-znf_b1h_alignment/ZNF215-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF215-201/neg_patterns.ENCSR699RWG_ChIP_ZNF215_K562_ENCSR767YTG_counts_pattern_1.n_38-vs-ZNF215-201.alignment counts-znf_b1h_alignment/ZNF215-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF215-201/pos_patterns.ENCSR699RWG_ChIP_ZNF215_K562_ENCSR767YTG_counts_pattern_0.n_4870-vs-ZNF215-201.alignment counts-znf_b1h_alignment/ZNF215-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF215-201/pos_patterns.ENCSR699RWG_ChIP_ZNF215_K562_ENCSR767YTG_counts_pattern_1.n_219-vs-ZNF215-201.alignment counts-znf_b1h_alignment/ZNF215-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF215-201/pos_patterns.ENCSR699RWG_ChIP_ZNF215_K562_ENCSR767YTG_counts_pattern_2.n_113-vs-ZNF215-201.alignment counts-znf_b1h_alignment/ZNF215-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF215-201/pos_patterns.ENCSR699RWG_ChIP_ZNF215_K562_ENCSR767YTG_counts_pattern_3.n_51-vs-ZNF215-201.alignment counts-znf_b1h_alignment/ZNF215-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF215-201/pos_patterns.ENCSR699RWG_ChIP_ZNF215_K562_ENCSR767YTG_counts_pattern_4.n_51-vs-ZNF215-201.alignment counts-znf_b1h_alignment/ZNF215-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/neg_patterns.ENCSR055FQB_ChIP_ZNF217_HepG2_ENCSR432MQS_counts_pattern_0.n_28-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/neg_patterns.ENCSR055FQB_ChIP_ZNF217_HepG2_ENCSR432MQS_counts_pattern_1.n_26-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/neg_patterns.ENCSR055FQB_ChIP_ZNF217_HepG2_ENCSR432MQS_counts_pattern_2.n_26-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/neg_patterns.ENCSR764CZW_ChIP_ZNF217_GM12878_ENCSR342GUC_counts_pattern_0.n_29-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/neg_patterns.ENCSR764CZW_ChIP_ZNF217_GM12878_ENCSR342GUC_counts_pattern_1.n_29-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR000EWU_ChIP_ZNF217_MCF-7_ENCSR702GDV_counts_pattern_0.n_3390-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR000EWU_ChIP_ZNF217_MCF-7_ENCSR702GDV_counts_pattern_1.n_1618-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR000EWU_ChIP_ZNF217_MCF-7_ENCSR702GDV_counts_pattern_2.n_1612-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR000EWU_ChIP_ZNF217_MCF-7_ENCSR702GDV_counts_pattern_3.n_998-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR000EWU_ChIP_ZNF217_MCF-7_ENCSR702GDV_counts_pattern_4.n_539-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR000EWU_ChIP_ZNF217_MCF-7_ENCSR702GDV_counts_pattern_5.n_427-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR000EWU_ChIP_ZNF217_MCF-7_ENCSR702GDV_counts_pattern_6.n_241-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR000EWU_ChIP_ZNF217_MCF-7_ENCSR702GDV_counts_pattern_7.n_22-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR055FQB_ChIP_ZNF217_HepG2_ENCSR432MQS_counts_pattern_0.n_9214-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR055FQB_ChIP_ZNF217_HepG2_ENCSR432MQS_counts_pattern_10.n_295-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR055FQB_ChIP_ZNF217_HepG2_ENCSR432MQS_counts_pattern_11.n_212-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR055FQB_ChIP_ZNF217_HepG2_ENCSR432MQS_counts_pattern_12.n_194-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR055FQB_ChIP_ZNF217_HepG2_ENCSR432MQS_counts_pattern_13.n_151-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR055FQB_ChIP_ZNF217_HepG2_ENCSR432MQS_counts_pattern_14.n_61-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR055FQB_ChIP_ZNF217_HepG2_ENCSR432MQS_counts_pattern_15.n_58-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR055FQB_ChIP_ZNF217_HepG2_ENCSR432MQS_counts_pattern_16.n_21-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR055FQB_ChIP_ZNF217_HepG2_ENCSR432MQS_counts_pattern_1.n_3546-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR055FQB_ChIP_ZNF217_HepG2_ENCSR432MQS_counts_pattern_2.n_3233-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR055FQB_ChIP_ZNF217_HepG2_ENCSR432MQS_counts_pattern_3.n_2711-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR055FQB_ChIP_ZNF217_HepG2_ENCSR432MQS_counts_pattern_4.n_1338-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR055FQB_ChIP_ZNF217_HepG2_ENCSR432MQS_counts_pattern_5.n_1105-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR055FQB_ChIP_ZNF217_HepG2_ENCSR432MQS_counts_pattern_6.n_806-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR055FQB_ChIP_ZNF217_HepG2_ENCSR432MQS_counts_pattern_7.n_705-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR055FQB_ChIP_ZNF217_HepG2_ENCSR432MQS_counts_pattern_8.n_484-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR055FQB_ChIP_ZNF217_HepG2_ENCSR432MQS_counts_pattern_9.n_477-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR465XQW_ChIP_ZNF217_MCF-7_ENCSR760FLT_counts_pattern_0.n_5576-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR465XQW_ChIP_ZNF217_MCF-7_ENCSR760FLT_counts_pattern_10.n_198-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR465XQW_ChIP_ZNF217_MCF-7_ENCSR760FLT_counts_pattern_11.n_139-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR465XQW_ChIP_ZNF217_MCF-7_ENCSR760FLT_counts_pattern_12.n_117-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR465XQW_ChIP_ZNF217_MCF-7_ENCSR760FLT_counts_pattern_13.n_90-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR465XQW_ChIP_ZNF217_MCF-7_ENCSR760FLT_counts_pattern_14.n_32-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR465XQW_ChIP_ZNF217_MCF-7_ENCSR760FLT_counts_pattern_15.n_30-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR465XQW_ChIP_ZNF217_MCF-7_ENCSR760FLT_counts_pattern_1.n_2880-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR465XQW_ChIP_ZNF217_MCF-7_ENCSR760FLT_counts_pattern_2.n_2505-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR465XQW_ChIP_ZNF217_MCF-7_ENCSR760FLT_counts_pattern_3.n_1832-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR465XQW_ChIP_ZNF217_MCF-7_ENCSR760FLT_counts_pattern_4.n_1590-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR465XQW_ChIP_ZNF217_MCF-7_ENCSR760FLT_counts_pattern_5.n_1391-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR465XQW_ChIP_ZNF217_MCF-7_ENCSR760FLT_counts_pattern_6.n_370-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR465XQW_ChIP_ZNF217_MCF-7_ENCSR760FLT_counts_pattern_7.n_353-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR465XQW_ChIP_ZNF217_MCF-7_ENCSR760FLT_counts_pattern_8.n_338-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR465XQW_ChIP_ZNF217_MCF-7_ENCSR760FLT_counts_pattern_9.n_270-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR764CZW_ChIP_ZNF217_GM12878_ENCSR342GUC_counts_pattern_0.n_2969-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR764CZW_ChIP_ZNF217_GM12878_ENCSR342GUC_counts_pattern_10.n_197-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR764CZW_ChIP_ZNF217_GM12878_ENCSR342GUC_counts_pattern_11.n_196-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR764CZW_ChIP_ZNF217_GM12878_ENCSR342GUC_counts_pattern_12.n_141-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR764CZW_ChIP_ZNF217_GM12878_ENCSR342GUC_counts_pattern_13.n_91-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR764CZW_ChIP_ZNF217_GM12878_ENCSR342GUC_counts_pattern_14.n_44-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR764CZW_ChIP_ZNF217_GM12878_ENCSR342GUC_counts_pattern_15.n_35-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR764CZW_ChIP_ZNF217_GM12878_ENCSR342GUC_counts_pattern_1.n_2564-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR764CZW_ChIP_ZNF217_GM12878_ENCSR342GUC_counts_pattern_2.n_2243-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR764CZW_ChIP_ZNF217_GM12878_ENCSR342GUC_counts_pattern_3.n_1644-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR764CZW_ChIP_ZNF217_GM12878_ENCSR342GUC_counts_pattern_4.n_1602-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR764CZW_ChIP_ZNF217_GM12878_ENCSR342GUC_counts_pattern_5.n_1004-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR764CZW_ChIP_ZNF217_GM12878_ENCSR342GUC_counts_pattern_6.n_976-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR764CZW_ChIP_ZNF217_GM12878_ENCSR342GUC_counts_pattern_7.n_957-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR764CZW_ChIP_ZNF217_GM12878_ENCSR342GUC_counts_pattern_8.n_948-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR764CZW_ChIP_ZNF217_GM12878_ENCSR342GUC_counts_pattern_9.n_296-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR841GLE_ChIP_ZNF217_K562_ENCSR729PSU_counts_pattern_0.n_219-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR841GLE_ChIP_ZNF217_K562_ENCSR729PSU_counts_pattern_1.n_115-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR841GLE_ChIP_ZNF217_K562_ENCSR729PSU_counts_pattern_2.n_60-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR841GLE_ChIP_ZNF217_K562_ENCSR729PSU_counts_pattern_3.n_53-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR841GLE_ChIP_ZNF217_K562_ENCSR729PSU_counts_pattern_4.n_52-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR841GLE_ChIP_ZNF217_K562_ENCSR729PSU_counts_pattern_5.n_46-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR841GLE_ChIP_ZNF217_K562_ENCSR729PSU_counts_pattern_6.n_33-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR841GLE_ChIP_ZNF217_K562_ENCSR729PSU_counts_pattern_7.n_30-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF217-201/pos_patterns.ENCSR912ATU_ChIP_ZNF217_MCF-7_ENCSR377NKR_counts_pattern_0.n_1240-vs-ZNF217-201.alignment counts-znf_b1h_alignment/ZNF217-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_counts_pattern_0.n_6758-vs-ZNF219-201.alignment counts-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_counts_pattern_10.n_385-vs-ZNF219-201.alignment counts-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_counts_pattern_11.n_378-vs-ZNF219-201.alignment counts-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_counts_pattern_12.n_73-vs-ZNF219-201.alignment counts-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_counts_pattern_13.n_31-vs-ZNF219-201.alignment counts-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_counts_pattern_14.n_28-vs-ZNF219-201.alignment counts-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_counts_pattern_15.n_25-vs-ZNF219-201.alignment counts-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_counts_pattern_1.n_5320-vs-ZNF219-201.alignment counts-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_counts_pattern_2.n_4702-vs-ZNF219-201.alignment counts-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_counts_pattern_3.n_3482-vs-ZNF219-201.alignment counts-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_counts_pattern_4.n_2671-vs-ZNF219-201.alignment counts-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_counts_pattern_5.n_1614-vs-ZNF219-201.alignment counts-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_counts_pattern_6.n_1507-vs-ZNF219-201.alignment counts-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_counts_pattern_7.n_1372-vs-ZNF219-201.alignment counts-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_counts_pattern_8.n_1225-vs-ZNF219-201.alignment counts-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_counts_pattern_9.n_540-vs-ZNF219-201.alignment counts-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF2-201/ChipExo_models_ZNF2_counts-pos.pattern_0.n_2039-vs-ZNF2-201.alignment counts-znf_b1h_alignment/ZNF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF2-201/ChipExo_models_ZNF2_counts-pos.pattern_1.n_1253-vs-ZNF2-201.alignment counts-znf_b1h_alignment/ZNF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF2-201/ChipExo_models_ZNF2_counts-pos.pattern_2.n_1072-vs-ZNF2-201.alignment counts-znf_b1h_alignment/ZNF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF2-201/ChipExo_models_ZNF2_counts-pos.pattern_3.n_103-vs-ZNF2-201.alignment counts-znf_b1h_alignment/ZNF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF2-201/ChipExo_models_ZNF2_counts-pos.pattern_4.n_41-vs-ZNF2-201.alignment counts-znf_b1h_alignment/ZNF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF2-201/pos_patterns.ENCSR011CKE_ChIP_ZNF2_HEK293_ENCSR686INM_counts_pattern_0.n_6407-vs-ZNF2-201.alignment counts-znf_b1h_alignment/ZNF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF2-201/pos_patterns.ENCSR011CKE_ChIP_ZNF2_HEK293_ENCSR686INM_counts_pattern_10.n_173-vs-ZNF2-201.alignment counts-znf_b1h_alignment/ZNF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF2-201/pos_patterns.ENCSR011CKE_ChIP_ZNF2_HEK293_ENCSR686INM_counts_pattern_11.n_172-vs-ZNF2-201.alignment counts-znf_b1h_alignment/ZNF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF2-201/pos_patterns.ENCSR011CKE_ChIP_ZNF2_HEK293_ENCSR686INM_counts_pattern_12.n_144-vs-ZNF2-201.alignment counts-znf_b1h_alignment/ZNF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF2-201/pos_patterns.ENCSR011CKE_ChIP_ZNF2_HEK293_ENCSR686INM_counts_pattern_13.n_128-vs-ZNF2-201.alignment counts-znf_b1h_alignment/ZNF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF2-201/pos_patterns.ENCSR011CKE_ChIP_ZNF2_HEK293_ENCSR686INM_counts_pattern_14.n_127-vs-ZNF2-201.alignment counts-znf_b1h_alignment/ZNF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF2-201/pos_patterns.ENCSR011CKE_ChIP_ZNF2_HEK293_ENCSR686INM_counts_pattern_15.n_122-vs-ZNF2-201.alignment counts-znf_b1h_alignment/ZNF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF2-201/pos_patterns.ENCSR011CKE_ChIP_ZNF2_HEK293_ENCSR686INM_counts_pattern_16.n_96-vs-ZNF2-201.alignment counts-znf_b1h_alignment/ZNF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF2-201/pos_patterns.ENCSR011CKE_ChIP_ZNF2_HEK293_ENCSR686INM_counts_pattern_17.n_82-vs-ZNF2-201.alignment counts-znf_b1h_alignment/ZNF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF2-201/pos_patterns.ENCSR011CKE_ChIP_ZNF2_HEK293_ENCSR686INM_counts_pattern_18.n_81-vs-ZNF2-201.alignment counts-znf_b1h_alignment/ZNF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF2-201/pos_patterns.ENCSR011CKE_ChIP_ZNF2_HEK293_ENCSR686INM_counts_pattern_19.n_75-vs-ZNF2-201.alignment counts-znf_b1h_alignment/ZNF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF2-201/pos_patterns.ENCSR011CKE_ChIP_ZNF2_HEK293_ENCSR686INM_counts_pattern_1.n_1511-vs-ZNF2-201.alignment counts-znf_b1h_alignment/ZNF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF2-201/pos_patterns.ENCSR011CKE_ChIP_ZNF2_HEK293_ENCSR686INM_counts_pattern_20.n_68-vs-ZNF2-201.alignment counts-znf_b1h_alignment/ZNF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF2-201/pos_patterns.ENCSR011CKE_ChIP_ZNF2_HEK293_ENCSR686INM_counts_pattern_21.n_55-vs-ZNF2-201.alignment counts-znf_b1h_alignment/ZNF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF2-201/pos_patterns.ENCSR011CKE_ChIP_ZNF2_HEK293_ENCSR686INM_counts_pattern_22.n_23-vs-ZNF2-201.alignment counts-znf_b1h_alignment/ZNF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF2-201/pos_patterns.ENCSR011CKE_ChIP_ZNF2_HEK293_ENCSR686INM_counts_pattern_2.n_735-vs-ZNF2-201.alignment counts-znf_b1h_alignment/ZNF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF2-201/pos_patterns.ENCSR011CKE_ChIP_ZNF2_HEK293_ENCSR686INM_counts_pattern_3.n_623-vs-ZNF2-201.alignment counts-znf_b1h_alignment/ZNF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF2-201/pos_patterns.ENCSR011CKE_ChIP_ZNF2_HEK293_ENCSR686INM_counts_pattern_4.n_484-vs-ZNF2-201.alignment counts-znf_b1h_alignment/ZNF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF2-201/pos_patterns.ENCSR011CKE_ChIP_ZNF2_HEK293_ENCSR686INM_counts_pattern_5.n_413-vs-ZNF2-201.alignment counts-znf_b1h_alignment/ZNF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF2-201/pos_patterns.ENCSR011CKE_ChIP_ZNF2_HEK293_ENCSR686INM_counts_pattern_6.n_335-vs-ZNF2-201.alignment counts-znf_b1h_alignment/ZNF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF2-201/pos_patterns.ENCSR011CKE_ChIP_ZNF2_HEK293_ENCSR686INM_counts_pattern_7.n_223-vs-ZNF2-201.alignment counts-znf_b1h_alignment/ZNF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF2-201/pos_patterns.ENCSR011CKE_ChIP_ZNF2_HEK293_ENCSR686INM_counts_pattern_8.n_219-vs-ZNF2-201.alignment counts-znf_b1h_alignment/ZNF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF2-201/pos_patterns.ENCSR011CKE_ChIP_ZNF2_HEK293_ENCSR686INM_counts_pattern_9.n_191-vs-ZNF2-201.alignment counts-znf_b1h_alignment/ZNF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR194BBY_ChIP_ZNF221_HEK293_ENCSR607NLH_counts_pattern_0.n_432-vs-ZNF221-201.alignment counts-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR194BBY_ChIP_ZNF221_HEK293_ENCSR607NLH_counts_pattern_1.n_139-vs-ZNF221-201.alignment counts-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR194BBY_ChIP_ZNF221_HEK293_ENCSR607NLH_counts_pattern_2.n_108-vs-ZNF221-201.alignment counts-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR194BBY_ChIP_ZNF221_HEK293_ENCSR607NLH_counts_pattern_3.n_36-vs-ZNF221-201.alignment counts-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_counts_pattern_0.n_2973-vs-ZNF221-201.alignment counts-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_counts_pattern_10.n_425-vs-ZNF221-201.alignment counts-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_counts_pattern_11.n_410-vs-ZNF221-201.alignment counts-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_counts_pattern_12.n_321-vs-ZNF221-201.alignment counts-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_counts_pattern_13.n_212-vs-ZNF221-201.alignment counts-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_counts_pattern_14.n_185-vs-ZNF221-201.alignment counts-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_counts_pattern_15.n_171-vs-ZNF221-201.alignment counts-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_counts_pattern_16.n_132-vs-ZNF221-201.alignment counts-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_counts_pattern_17.n_100-vs-ZNF221-201.alignment counts-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_counts_pattern_18.n_85-vs-ZNF221-201.alignment counts-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_counts_pattern_19.n_77-vs-ZNF221-201.alignment counts-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_counts_pattern_1.n_2610-vs-ZNF221-201.alignment counts-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_counts_pattern_20.n_74-vs-ZNF221-201.alignment counts-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_counts_pattern_21.n_63-vs-ZNF221-201.alignment counts-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_counts_pattern_22.n_45-vs-ZNF221-201.alignment counts-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_counts_pattern_2.n_2477-vs-ZNF221-201.alignment counts-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_counts_pattern_3.n_1000-vs-ZNF221-201.alignment counts-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_counts_pattern_4.n_890-vs-ZNF221-201.alignment counts-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_counts_pattern_5.n_873-vs-ZNF221-201.alignment counts-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_counts_pattern_6.n_764-vs-ZNF221-201.alignment counts-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_counts_pattern_7.n_585-vs-ZNF221-201.alignment counts-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_counts_pattern_8.n_553-vs-ZNF221-201.alignment counts-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_counts_pattern_9.n_431-vs-ZNF221-201.alignment counts-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF22-201/Hughes_GR_models_ZNF22_counts-pos.pattern_0.n_6219-vs-ZNF22-201.alignment counts-znf_b1h_alignment/ZNF22-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF222-201/ChipExo_models_ZNF222_counts-pos.pattern_0.n_397-vs-ZNF222-201.alignment counts-znf_b1h_alignment/ZNF222-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF222-201/ChipExo_models_ZNF222_counts-pos.pattern_10.n_46-vs-ZNF222-201.alignment counts-znf_b1h_alignment/ZNF222-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF222-201/ChipExo_models_ZNF222_counts-pos.pattern_11.n_39-vs-ZNF222-201.alignment counts-znf_b1h_alignment/ZNF222-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF222-201/ChipExo_models_ZNF222_counts-pos.pattern_12.n_31-vs-ZNF222-201.alignment counts-znf_b1h_alignment/ZNF222-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF222-201/ChipExo_models_ZNF222_counts-pos.pattern_13.n_28-vs-ZNF222-201.alignment counts-znf_b1h_alignment/ZNF222-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF222-201/ChipExo_models_ZNF222_counts-pos.pattern_14.n_23-vs-ZNF222-201.alignment counts-znf_b1h_alignment/ZNF222-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF222-201/ChipExo_models_ZNF222_counts-pos.pattern_1.n_190-vs-ZNF222-201.alignment counts-znf_b1h_alignment/ZNF222-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF222-201/ChipExo_models_ZNF222_counts-pos.pattern_2.n_181-vs-ZNF222-201.alignment counts-znf_b1h_alignment/ZNF222-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF222-201/ChipExo_models_ZNF222_counts-pos.pattern_3.n_147-vs-ZNF222-201.alignment counts-znf_b1h_alignment/ZNF222-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF222-201/ChipExo_models_ZNF222_counts-pos.pattern_4.n_122-vs-ZNF222-201.alignment counts-znf_b1h_alignment/ZNF222-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF222-201/ChipExo_models_ZNF222_counts-pos.pattern_5.n_115-vs-ZNF222-201.alignment counts-znf_b1h_alignment/ZNF222-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF222-201/ChipExo_models_ZNF222_counts-pos.pattern_6.n_82-vs-ZNF222-201.alignment counts-znf_b1h_alignment/ZNF222-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF222-201/ChipExo_models_ZNF222_counts-pos.pattern_7.n_74-vs-ZNF222-201.alignment counts-znf_b1h_alignment/ZNF222-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF222-201/ChipExo_models_ZNF222_counts-pos.pattern_8.n_64-vs-ZNF222-201.alignment counts-znf_b1h_alignment/ZNF222-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF222-201/ChipExo_models_ZNF222_counts-pos.pattern_9.n_62-vs-ZNF222-201.alignment counts-znf_b1h_alignment/ZNF222-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF223-201/ChipExo_models_ZNF223_counts-pos.pattern_0.n_486-vs-ZNF223-201.alignment counts-znf_b1h_alignment/ZNF223-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF223-201/ChipExo_models_ZNF223_counts-pos.pattern_1.n_26-vs-ZNF223-201.alignment counts-znf_b1h_alignment/ZNF223-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF223-201/pos_patterns.ENCSR906PCS_ChIP_ZNF223_HEK293_ENCSR464VPP_counts_pattern_0.n_3866-vs-ZNF223-201.alignment counts-znf_b1h_alignment/ZNF223-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF223-201/pos_patterns.ENCSR906PCS_ChIP_ZNF223_HEK293_ENCSR464VPP_counts_pattern_1.n_482-vs-ZNF223-201.alignment counts-znf_b1h_alignment/ZNF223-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF223-201/pos_patterns.ENCSR906PCS_ChIP_ZNF223_HEK293_ENCSR464VPP_counts_pattern_2.n_427-vs-ZNF223-201.alignment counts-znf_b1h_alignment/ZNF223-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF223-201/pos_patterns.ENCSR906PCS_ChIP_ZNF223_HEK293_ENCSR464VPP_counts_pattern_3.n_402-vs-ZNF223-201.alignment counts-znf_b1h_alignment/ZNF223-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF223-201/pos_patterns.ENCSR906PCS_ChIP_ZNF223_HEK293_ENCSR464VPP_counts_pattern_4.n_243-vs-ZNF223-201.alignment counts-znf_b1h_alignment/ZNF223-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF223-201/pos_patterns.ENCSR906PCS_ChIP_ZNF223_HEK293_ENCSR464VPP_counts_pattern_5.n_130-vs-ZNF223-201.alignment counts-znf_b1h_alignment/ZNF223-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/ChipExo_models_ZNF224_counts-pos.pattern_0.n_518-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/neg_patterns.ENCSR886VSY_ChIP_ZNF224_HepG2_ENCSR123CUI_counts_pattern_0.n_149-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/neg_patterns.ENCSR886VSY_ChIP_ZNF224_HepG2_ENCSR123CUI_counts_pattern_1.n_69-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/neg_patterns.ENCSR886VSY_ChIP_ZNF224_HepG2_ENCSR123CUI_counts_pattern_2.n_67-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/neg_patterns.ENCSR886VSY_ChIP_ZNF224_HepG2_ENCSR123CUI_counts_pattern_3.n_60-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/neg_patterns.ENCSR886VSY_ChIP_ZNF224_HepG2_ENCSR123CUI_counts_pattern_4.n_50-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/neg_patterns.ENCSR886VSY_ChIP_ZNF224_HepG2_ENCSR123CUI_counts_pattern_5.n_36-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/neg_patterns.ENCSR886VSY_ChIP_ZNF224_HepG2_ENCSR123CUI_counts_pattern_6.n_29-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/pos_patterns.ENCSR409PXW_ChIP_ZNF224_K562_ENCSR955JVO_counts_pattern_0.n_345-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/pos_patterns.ENCSR409PXW_ChIP_ZNF224_K562_ENCSR955JVO_counts_pattern_10.n_63-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/pos_patterns.ENCSR409PXW_ChIP_ZNF224_K562_ENCSR955JVO_counts_pattern_11.n_60-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/pos_patterns.ENCSR409PXW_ChIP_ZNF224_K562_ENCSR955JVO_counts_pattern_12.n_57-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/pos_patterns.ENCSR409PXW_ChIP_ZNF224_K562_ENCSR955JVO_counts_pattern_13.n_46-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/pos_patterns.ENCSR409PXW_ChIP_ZNF224_K562_ENCSR955JVO_counts_pattern_14.n_39-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/pos_patterns.ENCSR409PXW_ChIP_ZNF224_K562_ENCSR955JVO_counts_pattern_15.n_39-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/pos_patterns.ENCSR409PXW_ChIP_ZNF224_K562_ENCSR955JVO_counts_pattern_16.n_38-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/pos_patterns.ENCSR409PXW_ChIP_ZNF224_K562_ENCSR955JVO_counts_pattern_17.n_34-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/pos_patterns.ENCSR409PXW_ChIP_ZNF224_K562_ENCSR955JVO_counts_pattern_18.n_22-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/pos_patterns.ENCSR409PXW_ChIP_ZNF224_K562_ENCSR955JVO_counts_pattern_1.n_179-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/pos_patterns.ENCSR409PXW_ChIP_ZNF224_K562_ENCSR955JVO_counts_pattern_2.n_86-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/pos_patterns.ENCSR409PXW_ChIP_ZNF224_K562_ENCSR955JVO_counts_pattern_3.n_75-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/pos_patterns.ENCSR409PXW_ChIP_ZNF224_K562_ENCSR955JVO_counts_pattern_4.n_74-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/pos_patterns.ENCSR409PXW_ChIP_ZNF224_K562_ENCSR955JVO_counts_pattern_5.n_71-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/pos_patterns.ENCSR409PXW_ChIP_ZNF224_K562_ENCSR955JVO_counts_pattern_6.n_70-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/pos_patterns.ENCSR409PXW_ChIP_ZNF224_K562_ENCSR955JVO_counts_pattern_7.n_70-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/pos_patterns.ENCSR409PXW_ChIP_ZNF224_K562_ENCSR955JVO_counts_pattern_8.n_69-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/pos_patterns.ENCSR409PXW_ChIP_ZNF224_K562_ENCSR955JVO_counts_pattern_9.n_67-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/pos_patterns.ENCSR886VSY_ChIP_ZNF224_HepG2_ENCSR123CUI_counts_pattern_0.n_1202-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/pos_patterns.ENCSR886VSY_ChIP_ZNF224_HepG2_ENCSR123CUI_counts_pattern_10.n_94-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/pos_patterns.ENCSR886VSY_ChIP_ZNF224_HepG2_ENCSR123CUI_counts_pattern_11.n_90-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/pos_patterns.ENCSR886VSY_ChIP_ZNF224_HepG2_ENCSR123CUI_counts_pattern_12.n_75-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/pos_patterns.ENCSR886VSY_ChIP_ZNF224_HepG2_ENCSR123CUI_counts_pattern_13.n_74-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/pos_patterns.ENCSR886VSY_ChIP_ZNF224_HepG2_ENCSR123CUI_counts_pattern_14.n_63-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/pos_patterns.ENCSR886VSY_ChIP_ZNF224_HepG2_ENCSR123CUI_counts_pattern_15.n_58-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/pos_patterns.ENCSR886VSY_ChIP_ZNF224_HepG2_ENCSR123CUI_counts_pattern_16.n_53-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/pos_patterns.ENCSR886VSY_ChIP_ZNF224_HepG2_ENCSR123CUI_counts_pattern_17.n_43-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/pos_patterns.ENCSR886VSY_ChIP_ZNF224_HepG2_ENCSR123CUI_counts_pattern_18.n_23-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/pos_patterns.ENCSR886VSY_ChIP_ZNF224_HepG2_ENCSR123CUI_counts_pattern_1.n_1099-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/pos_patterns.ENCSR886VSY_ChIP_ZNF224_HepG2_ENCSR123CUI_counts_pattern_2.n_1039-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/pos_patterns.ENCSR886VSY_ChIP_ZNF224_HepG2_ENCSR123CUI_counts_pattern_3.n_906-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/pos_patterns.ENCSR886VSY_ChIP_ZNF224_HepG2_ENCSR123CUI_counts_pattern_4.n_724-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/pos_patterns.ENCSR886VSY_ChIP_ZNF224_HepG2_ENCSR123CUI_counts_pattern_5.n_171-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/pos_patterns.ENCSR886VSY_ChIP_ZNF224_HepG2_ENCSR123CUI_counts_pattern_6.n_141-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/pos_patterns.ENCSR886VSY_ChIP_ZNF224_HepG2_ENCSR123CUI_counts_pattern_7.n_126-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/pos_patterns.ENCSR886VSY_ChIP_ZNF224_HepG2_ENCSR123CUI_counts_pattern_8.n_98-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF224-201/pos_patterns.ENCSR886VSY_ChIP_ZNF224_HepG2_ENCSR123CUI_counts_pattern_9.n_97-vs-ZNF224-201.alignment counts-znf_b1h_alignment/ZNF224-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF225-201/ChipExo_models_ZNF225_counts-pos.pattern_0.n_307-vs-ZNF225-201.alignment counts-znf_b1h_alignment/ZNF225-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF225-201/ChipExo_models_ZNF225_counts-pos.pattern_1.n_60-vs-ZNF225-201.alignment counts-znf_b1h_alignment/ZNF225-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF225-201/ChipExo_models_ZNF225_counts-pos.pattern_2.n_30-vs-ZNF225-201.alignment counts-znf_b1h_alignment/ZNF225-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF225-201/pos_patterns.ENCSR075PWK_ChIP_ZNF225_HepG2_ENCSR990EVY_counts_pattern_0.n_4626-vs-ZNF225-201.alignment counts-znf_b1h_alignment/ZNF225-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF225-201/pos_patterns.ENCSR075PWK_ChIP_ZNF225_HepG2_ENCSR990EVY_counts_pattern_1.n_237-vs-ZNF225-201.alignment counts-znf_b1h_alignment/ZNF225-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF225-201/pos_patterns.ENCSR075PWK_ChIP_ZNF225_HepG2_ENCSR990EVY_counts_pattern_2.n_172-vs-ZNF225-201.alignment counts-znf_b1h_alignment/ZNF225-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF225-201/pos_patterns.ENCSR075PWK_ChIP_ZNF225_HepG2_ENCSR990EVY_counts_pattern_3.n_123-vs-ZNF225-201.alignment counts-znf_b1h_alignment/ZNF225-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF225-201/pos_patterns.ENCSR075PWK_ChIP_ZNF225_HepG2_ENCSR990EVY_counts_pattern_4.n_91-vs-ZNF225-201.alignment counts-znf_b1h_alignment/ZNF225-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF225-201/pos_patterns.ENCSR075PWK_ChIP_ZNF225_HepG2_ENCSR990EVY_counts_pattern_5.n_82-vs-ZNF225-201.alignment counts-znf_b1h_alignment/ZNF225-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF225-201/pos_patterns.ENCSR075PWK_ChIP_ZNF225_HepG2_ENCSR990EVY_counts_pattern_6.n_81-vs-ZNF225-201.alignment counts-znf_b1h_alignment/ZNF225-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF225-201/pos_patterns.ENCSR075PWK_ChIP_ZNF225_HepG2_ENCSR990EVY_counts_pattern_7.n_43-vs-ZNF225-201.alignment counts-znf_b1h_alignment/ZNF225-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF225-201/pos_patterns.ENCSR075PWK_ChIP_ZNF225_HepG2_ENCSR990EVY_counts_pattern_8.n_29-vs-ZNF225-201.alignment counts-znf_b1h_alignment/ZNF225-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF225-201/pos_patterns.ENCSR075PWK_ChIP_ZNF225_HepG2_ENCSR990EVY_counts_pattern_9.n_28-vs-ZNF225-201.alignment counts-znf_b1h_alignment/ZNF225-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF227-201/neg_patterns.ENCSR877UJB_ChIP_ZNF227_MCF-7_ENCSR077NMC_counts_pattern_0.n_62-vs-ZNF227-201.alignment counts-znf_b1h_alignment/ZNF227-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF227-201/neg_patterns.ENCSR877UJB_ChIP_ZNF227_MCF-7_ENCSR077NMC_counts_pattern_1.n_34-vs-ZNF227-201.alignment counts-znf_b1h_alignment/ZNF227-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF227-201/neg_patterns.ENCSR877UJB_ChIP_ZNF227_MCF-7_ENCSR077NMC_counts_pattern_2.n_31-vs-ZNF227-201.alignment counts-znf_b1h_alignment/ZNF227-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF227-201/neg_patterns.ENCSR877UJB_ChIP_ZNF227_MCF-7_ENCSR077NMC_counts_pattern_3.n_27-vs-ZNF227-201.alignment counts-znf_b1h_alignment/ZNF227-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF227-201/neg_patterns.ENCSR877UJB_ChIP_ZNF227_MCF-7_ENCSR077NMC_counts_pattern_4.n_27-vs-ZNF227-201.alignment counts-znf_b1h_alignment/ZNF227-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF227-201/neg_patterns.ENCSR877UJB_ChIP_ZNF227_MCF-7_ENCSR077NMC_counts_pattern_5.n_23-vs-ZNF227-201.alignment counts-znf_b1h_alignment/ZNF227-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF227-201/neg_patterns.ENCSR877UJB_ChIP_ZNF227_MCF-7_ENCSR077NMC_counts_pattern_6.n_21-vs-ZNF227-201.alignment counts-znf_b1h_alignment/ZNF227-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF227-201/pos_patterns.ENCSR877UJB_ChIP_ZNF227_MCF-7_ENCSR077NMC_counts_pattern_0.n_691-vs-ZNF227-201.alignment counts-znf_b1h_alignment/ZNF227-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF227-201/pos_patterns.ENCSR877UJB_ChIP_ZNF227_MCF-7_ENCSR077NMC_counts_pattern_10.n_20-vs-ZNF227-201.alignment counts-znf_b1h_alignment/ZNF227-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF227-201/pos_patterns.ENCSR877UJB_ChIP_ZNF227_MCF-7_ENCSR077NMC_counts_pattern_1.n_90-vs-ZNF227-201.alignment counts-znf_b1h_alignment/ZNF227-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF227-201/pos_patterns.ENCSR877UJB_ChIP_ZNF227_MCF-7_ENCSR077NMC_counts_pattern_2.n_76-vs-ZNF227-201.alignment counts-znf_b1h_alignment/ZNF227-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF227-201/pos_patterns.ENCSR877UJB_ChIP_ZNF227_MCF-7_ENCSR077NMC_counts_pattern_3.n_39-vs-ZNF227-201.alignment counts-znf_b1h_alignment/ZNF227-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF227-201/pos_patterns.ENCSR877UJB_ChIP_ZNF227_MCF-7_ENCSR077NMC_counts_pattern_4.n_37-vs-ZNF227-201.alignment counts-znf_b1h_alignment/ZNF227-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF227-201/pos_patterns.ENCSR877UJB_ChIP_ZNF227_MCF-7_ENCSR077NMC_counts_pattern_5.n_36-vs-ZNF227-201.alignment counts-znf_b1h_alignment/ZNF227-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF227-201/pos_patterns.ENCSR877UJB_ChIP_ZNF227_MCF-7_ENCSR077NMC_counts_pattern_6.n_33-vs-ZNF227-201.alignment counts-znf_b1h_alignment/ZNF227-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF227-201/pos_patterns.ENCSR877UJB_ChIP_ZNF227_MCF-7_ENCSR077NMC_counts_pattern_7.n_32-vs-ZNF227-201.alignment counts-znf_b1h_alignment/ZNF227-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF227-201/pos_patterns.ENCSR877UJB_ChIP_ZNF227_MCF-7_ENCSR077NMC_counts_pattern_8.n_24-vs-ZNF227-201.alignment counts-znf_b1h_alignment/ZNF227-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF227-201/pos_patterns.ENCSR877UJB_ChIP_ZNF227_MCF-7_ENCSR077NMC_counts_pattern_9.n_22-vs-ZNF227-201.alignment counts-znf_b1h_alignment/ZNF227-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF230-201/pos_patterns.ENCSR087HFN_ChIP_ZNF230_HepG2_ENCSR680JFT_counts_pattern_0.n_3968-vs-ZNF230-201.alignment counts-znf_b1h_alignment/ZNF230-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF230-201/pos_patterns.ENCSR087HFN_ChIP_ZNF230_HepG2_ENCSR680JFT_counts_pattern_10.n_317-vs-ZNF230-201.alignment counts-znf_b1h_alignment/ZNF230-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF230-201/pos_patterns.ENCSR087HFN_ChIP_ZNF230_HepG2_ENCSR680JFT_counts_pattern_11.n_304-vs-ZNF230-201.alignment counts-znf_b1h_alignment/ZNF230-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF230-201/pos_patterns.ENCSR087HFN_ChIP_ZNF230_HepG2_ENCSR680JFT_counts_pattern_12.n_295-vs-ZNF230-201.alignment counts-znf_b1h_alignment/ZNF230-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF230-201/pos_patterns.ENCSR087HFN_ChIP_ZNF230_HepG2_ENCSR680JFT_counts_pattern_13.n_283-vs-ZNF230-201.alignment counts-znf_b1h_alignment/ZNF230-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF230-201/pos_patterns.ENCSR087HFN_ChIP_ZNF230_HepG2_ENCSR680JFT_counts_pattern_14.n_273-vs-ZNF230-201.alignment counts-znf_b1h_alignment/ZNF230-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF230-201/pos_patterns.ENCSR087HFN_ChIP_ZNF230_HepG2_ENCSR680JFT_counts_pattern_15.n_266-vs-ZNF230-201.alignment counts-znf_b1h_alignment/ZNF230-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF230-201/pos_patterns.ENCSR087HFN_ChIP_ZNF230_HepG2_ENCSR680JFT_counts_pattern_16.n_264-vs-ZNF230-201.alignment counts-znf_b1h_alignment/ZNF230-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF230-201/pos_patterns.ENCSR087HFN_ChIP_ZNF230_HepG2_ENCSR680JFT_counts_pattern_17.n_242-vs-ZNF230-201.alignment counts-znf_b1h_alignment/ZNF230-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF230-201/pos_patterns.ENCSR087HFN_ChIP_ZNF230_HepG2_ENCSR680JFT_counts_pattern_18.n_240-vs-ZNF230-201.alignment counts-znf_b1h_alignment/ZNF230-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF230-201/pos_patterns.ENCSR087HFN_ChIP_ZNF230_HepG2_ENCSR680JFT_counts_pattern_19.n_224-vs-ZNF230-201.alignment counts-znf_b1h_alignment/ZNF230-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF230-201/pos_patterns.ENCSR087HFN_ChIP_ZNF230_HepG2_ENCSR680JFT_counts_pattern_1.n_1344-vs-ZNF230-201.alignment counts-znf_b1h_alignment/ZNF230-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF230-201/pos_patterns.ENCSR087HFN_ChIP_ZNF230_HepG2_ENCSR680JFT_counts_pattern_20.n_169-vs-ZNF230-201.alignment counts-znf_b1h_alignment/ZNF230-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF230-201/pos_patterns.ENCSR087HFN_ChIP_ZNF230_HepG2_ENCSR680JFT_counts_pattern_21.n_141-vs-ZNF230-201.alignment counts-znf_b1h_alignment/ZNF230-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF230-201/pos_patterns.ENCSR087HFN_ChIP_ZNF230_HepG2_ENCSR680JFT_counts_pattern_22.n_94-vs-ZNF230-201.alignment counts-znf_b1h_alignment/ZNF230-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF230-201/pos_patterns.ENCSR087HFN_ChIP_ZNF230_HepG2_ENCSR680JFT_counts_pattern_23.n_86-vs-ZNF230-201.alignment counts-znf_b1h_alignment/ZNF230-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF230-201/pos_patterns.ENCSR087HFN_ChIP_ZNF230_HepG2_ENCSR680JFT_counts_pattern_24.n_74-vs-ZNF230-201.alignment counts-znf_b1h_alignment/ZNF230-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF230-201/pos_patterns.ENCSR087HFN_ChIP_ZNF230_HepG2_ENCSR680JFT_counts_pattern_25.n_37-vs-ZNF230-201.alignment counts-znf_b1h_alignment/ZNF230-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF230-201/pos_patterns.ENCSR087HFN_ChIP_ZNF230_HepG2_ENCSR680JFT_counts_pattern_2.n_1241-vs-ZNF230-201.alignment counts-znf_b1h_alignment/ZNF230-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF230-201/pos_patterns.ENCSR087HFN_ChIP_ZNF230_HepG2_ENCSR680JFT_counts_pattern_3.n_831-vs-ZNF230-201.alignment counts-znf_b1h_alignment/ZNF230-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF230-201/pos_patterns.ENCSR087HFN_ChIP_ZNF230_HepG2_ENCSR680JFT_counts_pattern_4.n_658-vs-ZNF230-201.alignment counts-znf_b1h_alignment/ZNF230-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF230-201/pos_patterns.ENCSR087HFN_ChIP_ZNF230_HepG2_ENCSR680JFT_counts_pattern_5.n_383-vs-ZNF230-201.alignment counts-znf_b1h_alignment/ZNF230-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF230-201/pos_patterns.ENCSR087HFN_ChIP_ZNF230_HepG2_ENCSR680JFT_counts_pattern_6.n_381-vs-ZNF230-201.alignment counts-znf_b1h_alignment/ZNF230-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF230-201/pos_patterns.ENCSR087HFN_ChIP_ZNF230_HepG2_ENCSR680JFT_counts_pattern_7.n_354-vs-ZNF230-201.alignment counts-znf_b1h_alignment/ZNF230-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF230-201/pos_patterns.ENCSR087HFN_ChIP_ZNF230_HepG2_ENCSR680JFT_counts_pattern_8.n_333-vs-ZNF230-201.alignment counts-znf_b1h_alignment/ZNF230-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF230-201/pos_patterns.ENCSR087HFN_ChIP_ZNF230_HepG2_ENCSR680JFT_counts_pattern_9.n_327-vs-ZNF230-201.alignment counts-znf_b1h_alignment/ZNF230-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF23-201/pos_patterns.ENCSR679KXF_ChIP_ZNF23_HEK293_ENCSR340HRP_counts_pattern_0.n_479-vs-ZNF23-201.alignment counts-znf_b1h_alignment/ZNF23-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF23-201/pos_patterns.ENCSR679KXF_ChIP_ZNF23_HEK293_ENCSR340HRP_counts_pattern_1.n_164-vs-ZNF23-201.alignment counts-znf_b1h_alignment/ZNF23-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF23-201/pos_patterns.ENCSR679KXF_ChIP_ZNF23_HEK293_ENCSR340HRP_counts_pattern_2.n_134-vs-ZNF23-201.alignment counts-znf_b1h_alignment/ZNF23-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF23-201/pos_patterns.ENCSR679KXF_ChIP_ZNF23_HEK293_ENCSR340HRP_counts_pattern_3.n_23-vs-ZNF23-201.alignment counts-znf_b1h_alignment/ZNF23-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF23-201/pos_patterns.ENCSR898IDK_ChIP_ZNF23_K562_ENCSR283CIN_counts_pattern_0.n_527-vs-ZNF23-201.alignment counts-znf_b1h_alignment/ZNF23-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF23-201/pos_patterns.ENCSR898IDK_ChIP_ZNF23_K562_ENCSR283CIN_counts_pattern_1.n_476-vs-ZNF23-201.alignment counts-znf_b1h_alignment/ZNF23-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF23-201/pos_patterns.ENCSR898IDK_ChIP_ZNF23_K562_ENCSR283CIN_counts_pattern_2.n_91-vs-ZNF23-201.alignment counts-znf_b1h_alignment/ZNF23-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF23-201/pos_patterns.ENCSR898IDK_ChIP_ZNF23_K562_ENCSR283CIN_counts_pattern_3.n_82-vs-ZNF23-201.alignment counts-znf_b1h_alignment/ZNF23-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF23-201/pos_patterns.ENCSR898IDK_ChIP_ZNF23_K562_ENCSR283CIN_counts_pattern_4.n_70-vs-ZNF23-201.alignment counts-znf_b1h_alignment/ZNF23-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF23-201/pos_patterns.ENCSR898IDK_ChIP_ZNF23_K562_ENCSR283CIN_counts_pattern_5.n_66-vs-ZNF23-201.alignment counts-znf_b1h_alignment/ZNF23-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF23-201/pos_patterns.ENCSR898IDK_ChIP_ZNF23_K562_ENCSR283CIN_counts_pattern_6.n_37-vs-ZNF23-201.alignment counts-znf_b1h_alignment/ZNF23-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR034IND_ChIP_ZNF232_WTC11_ENCSR769EFJ_counts_pattern_0.n_2303-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR034IND_ChIP_ZNF232_WTC11_ENCSR769EFJ_counts_pattern_10.n_120-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR034IND_ChIP_ZNF232_WTC11_ENCSR769EFJ_counts_pattern_11.n_119-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR034IND_ChIP_ZNF232_WTC11_ENCSR769EFJ_counts_pattern_12.n_100-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR034IND_ChIP_ZNF232_WTC11_ENCSR769EFJ_counts_pattern_13.n_99-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR034IND_ChIP_ZNF232_WTC11_ENCSR769EFJ_counts_pattern_14.n_98-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR034IND_ChIP_ZNF232_WTC11_ENCSR769EFJ_counts_pattern_15.n_92-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR034IND_ChIP_ZNF232_WTC11_ENCSR769EFJ_counts_pattern_16.n_79-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR034IND_ChIP_ZNF232_WTC11_ENCSR769EFJ_counts_pattern_17.n_54-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR034IND_ChIP_ZNF232_WTC11_ENCSR769EFJ_counts_pattern_18.n_41-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR034IND_ChIP_ZNF232_WTC11_ENCSR769EFJ_counts_pattern_1.n_1583-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR034IND_ChIP_ZNF232_WTC11_ENCSR769EFJ_counts_pattern_2.n_555-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR034IND_ChIP_ZNF232_WTC11_ENCSR769EFJ_counts_pattern_3.n_515-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR034IND_ChIP_ZNF232_WTC11_ENCSR769EFJ_counts_pattern_4.n_488-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR034IND_ChIP_ZNF232_WTC11_ENCSR769EFJ_counts_pattern_5.n_348-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR034IND_ChIP_ZNF232_WTC11_ENCSR769EFJ_counts_pattern_6.n_316-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR034IND_ChIP_ZNF232_WTC11_ENCSR769EFJ_counts_pattern_7.n_219-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR034IND_ChIP_ZNF232_WTC11_ENCSR769EFJ_counts_pattern_8.n_159-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR034IND_ChIP_ZNF232_WTC11_ENCSR769EFJ_counts_pattern_9.n_121-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR360ECJ_ChIP_ZNF232_K562_ENCSR185CCX_counts_pattern_0.n_1341-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR360ECJ_ChIP_ZNF232_K562_ENCSR185CCX_counts_pattern_10.n_77-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR360ECJ_ChIP_ZNF232_K562_ENCSR185CCX_counts_pattern_11.n_65-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR360ECJ_ChIP_ZNF232_K562_ENCSR185CCX_counts_pattern_12.n_52-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR360ECJ_ChIP_ZNF232_K562_ENCSR185CCX_counts_pattern_13.n_39-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR360ECJ_ChIP_ZNF232_K562_ENCSR185CCX_counts_pattern_14.n_35-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR360ECJ_ChIP_ZNF232_K562_ENCSR185CCX_counts_pattern_15.n_34-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR360ECJ_ChIP_ZNF232_K562_ENCSR185CCX_counts_pattern_16.n_32-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR360ECJ_ChIP_ZNF232_K562_ENCSR185CCX_counts_pattern_1.n_446-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR360ECJ_ChIP_ZNF232_K562_ENCSR185CCX_counts_pattern_2.n_251-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR360ECJ_ChIP_ZNF232_K562_ENCSR185CCX_counts_pattern_3.n_213-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR360ECJ_ChIP_ZNF232_K562_ENCSR185CCX_counts_pattern_4.n_168-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR360ECJ_ChIP_ZNF232_K562_ENCSR185CCX_counts_pattern_5.n_157-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR360ECJ_ChIP_ZNF232_K562_ENCSR185CCX_counts_pattern_6.n_119-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR360ECJ_ChIP_ZNF232_K562_ENCSR185CCX_counts_pattern_7.n_117-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR360ECJ_ChIP_ZNF232_K562_ENCSR185CCX_counts_pattern_8.n_94-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR360ECJ_ChIP_ZNF232_K562_ENCSR185CCX_counts_pattern_9.n_81-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR837GLU_ChIP_ZNF232_HepG2_ENCSR348QIE_counts_pattern_0.n_2683-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR837GLU_ChIP_ZNF232_HepG2_ENCSR348QIE_counts_pattern_10.n_341-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR837GLU_ChIP_ZNF232_HepG2_ENCSR348QIE_counts_pattern_11.n_332-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR837GLU_ChIP_ZNF232_HepG2_ENCSR348QIE_counts_pattern_12.n_313-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR837GLU_ChIP_ZNF232_HepG2_ENCSR348QIE_counts_pattern_13.n_298-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR837GLU_ChIP_ZNF232_HepG2_ENCSR348QIE_counts_pattern_14.n_294-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR837GLU_ChIP_ZNF232_HepG2_ENCSR348QIE_counts_pattern_15.n_278-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR837GLU_ChIP_ZNF232_HepG2_ENCSR348QIE_counts_pattern_16.n_274-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR837GLU_ChIP_ZNF232_HepG2_ENCSR348QIE_counts_pattern_17.n_243-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR837GLU_ChIP_ZNF232_HepG2_ENCSR348QIE_counts_pattern_18.n_101-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR837GLU_ChIP_ZNF232_HepG2_ENCSR348QIE_counts_pattern_19.n_69-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR837GLU_ChIP_ZNF232_HepG2_ENCSR348QIE_counts_pattern_1.n_1098-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR837GLU_ChIP_ZNF232_HepG2_ENCSR348QIE_counts_pattern_20.n_68-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR837GLU_ChIP_ZNF232_HepG2_ENCSR348QIE_counts_pattern_2.n_991-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR837GLU_ChIP_ZNF232_HepG2_ENCSR348QIE_counts_pattern_3.n_954-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR837GLU_ChIP_ZNF232_HepG2_ENCSR348QIE_counts_pattern_4.n_931-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR837GLU_ChIP_ZNF232_HepG2_ENCSR348QIE_counts_pattern_5.n_722-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR837GLU_ChIP_ZNF232_HepG2_ENCSR348QIE_counts_pattern_6.n_698-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR837GLU_ChIP_ZNF232_HepG2_ENCSR348QIE_counts_pattern_7.n_550-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR837GLU_ChIP_ZNF232_HepG2_ENCSR348QIE_counts_pattern_8.n_492-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR837GLU_ChIP_ZNF232_HepG2_ENCSR348QIE_counts_pattern_9.n_425-vs-ZNF232-201.alignment counts-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF234-201/pos_patterns.ENCSR800ASH_ChIP_ZNF234_HepG2_ENCSR359AAY_counts_pattern_0.n_855-vs-ZNF234-201.alignment counts-znf_b1h_alignment/ZNF234-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF234-201/pos_patterns.ENCSR800ASH_ChIP_ZNF234_HepG2_ENCSR359AAY_counts_pattern_1.n_786-vs-ZNF234-201.alignment counts-znf_b1h_alignment/ZNF234-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF234-201/pos_patterns.ENCSR800ASH_ChIP_ZNF234_HepG2_ENCSR359AAY_counts_pattern_2.n_734-vs-ZNF234-201.alignment counts-znf_b1h_alignment/ZNF234-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF234-201/pos_patterns.ENCSR800ASH_ChIP_ZNF234_HepG2_ENCSR359AAY_counts_pattern_3.n_466-vs-ZNF234-201.alignment counts-znf_b1h_alignment/ZNF234-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF234-201/pos_patterns.ENCSR800ASH_ChIP_ZNF234_HepG2_ENCSR359AAY_counts_pattern_4.n_384-vs-ZNF234-201.alignment counts-znf_b1h_alignment/ZNF234-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF235-201/ChipExo_models_ZNF235_counts-pos.pattern_0.n_96-vs-ZNF235-201.alignment counts-znf_b1h_alignment/ZNF235-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF235-201/ChipExo_models_ZNF235_counts-pos.pattern_1.n_35-vs-ZNF235-201.alignment counts-znf_b1h_alignment/ZNF235-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF235-201/pos_patterns.ENCSR924KZA_ChIP_ZNF235_HepG2_ENCSR999NDV_counts_pattern_0.n_2121-vs-ZNF235-201.alignment counts-znf_b1h_alignment/ZNF235-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF235-201/pos_patterns.ENCSR924KZA_ChIP_ZNF235_HepG2_ENCSR999NDV_counts_pattern_1.n_1945-vs-ZNF235-201.alignment counts-znf_b1h_alignment/ZNF235-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF235-201/pos_patterns.ENCSR924KZA_ChIP_ZNF235_HepG2_ENCSR999NDV_counts_pattern_2.n_1879-vs-ZNF235-201.alignment counts-znf_b1h_alignment/ZNF235-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF235-201/pos_patterns.ENCSR924KZA_ChIP_ZNF235_HepG2_ENCSR999NDV_counts_pattern_3.n_1736-vs-ZNF235-201.alignment counts-znf_b1h_alignment/ZNF235-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF235-201/pos_patterns.ENCSR924KZA_ChIP_ZNF235_HepG2_ENCSR999NDV_counts_pattern_4.n_189-vs-ZNF235-201.alignment counts-znf_b1h_alignment/ZNF235-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF235-201/pos_patterns.ENCSR924KZA_ChIP_ZNF235_HepG2_ENCSR999NDV_counts_pattern_5.n_73-vs-ZNF235-201.alignment counts-znf_b1h_alignment/ZNF235-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF239-201/neg_patterns.ENCSR606KTL_ChIP_ZNF239_K562_ENCSR955PBS_counts_pattern_0.n_376-vs-ZNF239-201.alignment counts-znf_b1h_alignment/ZNF239-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF239-201/neg_patterns.ENCSR606KTL_ChIP_ZNF239_K562_ENCSR955PBS_counts_pattern_1.n_87-vs-ZNF239-201.alignment counts-znf_b1h_alignment/ZNF239-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF239-201/neg_patterns.ENCSR606KTL_ChIP_ZNF239_K562_ENCSR955PBS_counts_pattern_2.n_75-vs-ZNF239-201.alignment counts-znf_b1h_alignment/ZNF239-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF239-201/neg_patterns.ENCSR606KTL_ChIP_ZNF239_K562_ENCSR955PBS_counts_pattern_3.n_29-vs-ZNF239-201.alignment counts-znf_b1h_alignment/ZNF239-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF239-201/neg_patterns.ENCSR606KTL_ChIP_ZNF239_K562_ENCSR955PBS_counts_pattern_4.n_25-vs-ZNF239-201.alignment counts-znf_b1h_alignment/ZNF239-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF239-201/pos_patterns.ENCSR440COG_ChIP_ZNF239_HEK293_ENCSR233CVW_counts_pattern_0.n_894-vs-ZNF239-201.alignment counts-znf_b1h_alignment/ZNF239-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF239-201/pos_patterns.ENCSR440COG_ChIP_ZNF239_HEK293_ENCSR233CVW_counts_pattern_1.n_333-vs-ZNF239-201.alignment counts-znf_b1h_alignment/ZNF239-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF239-201/pos_patterns.ENCSR440COG_ChIP_ZNF239_HEK293_ENCSR233CVW_counts_pattern_2.n_105-vs-ZNF239-201.alignment counts-znf_b1h_alignment/ZNF239-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF239-201/pos_patterns.ENCSR440COG_ChIP_ZNF239_HEK293_ENCSR233CVW_counts_pattern_3.n_50-vs-ZNF239-201.alignment counts-znf_b1h_alignment/ZNF239-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF239-201/pos_patterns.ENCSR440COG_ChIP_ZNF239_HEK293_ENCSR233CVW_counts_pattern_4.n_21-vs-ZNF239-201.alignment counts-znf_b1h_alignment/ZNF239-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF239-201/pos_patterns.ENCSR606KTL_ChIP_ZNF239_K562_ENCSR955PBS_counts_pattern_0.n_1570-vs-ZNF239-201.alignment counts-znf_b1h_alignment/ZNF239-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF239-201/pos_patterns.ENCSR606KTL_ChIP_ZNF239_K562_ENCSR955PBS_counts_pattern_1.n_1469-vs-ZNF239-201.alignment counts-znf_b1h_alignment/ZNF239-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF239-201/pos_patterns.ENCSR606KTL_ChIP_ZNF239_K562_ENCSR955PBS_counts_pattern_2.n_1457-vs-ZNF239-201.alignment counts-znf_b1h_alignment/ZNF239-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF239-201/pos_patterns.ENCSR606KTL_ChIP_ZNF239_K562_ENCSR955PBS_counts_pattern_3.n_441-vs-ZNF239-201.alignment counts-znf_b1h_alignment/ZNF239-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF239-201/pos_patterns.ENCSR606KTL_ChIP_ZNF239_K562_ENCSR955PBS_counts_pattern_4.n_157-vs-ZNF239-201.alignment counts-znf_b1h_alignment/ZNF239-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF239-201/pos_patterns.ENCSR606KTL_ChIP_ZNF239_K562_ENCSR955PBS_counts_pattern_5.n_54-vs-ZNF239-201.alignment counts-znf_b1h_alignment/ZNF239-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF239-201/pos_patterns.ENCSR606KTL_ChIP_ZNF239_K562_ENCSR955PBS_counts_pattern_6.n_42-vs-ZNF239-201.alignment counts-znf_b1h_alignment/ZNF239-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF239-201/pos_patterns.ENCSR606KTL_ChIP_ZNF239_K562_ENCSR955PBS_counts_pattern_7.n_40-vs-ZNF239-201.alignment counts-znf_b1h_alignment/ZNF239-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF239-201/pos_patterns.ENCSR606KTL_ChIP_ZNF239_K562_ENCSR955PBS_counts_pattern_8.n_38-vs-ZNF239-201.alignment counts-znf_b1h_alignment/ZNF239-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF239-201/pos_patterns.ENCSR606KTL_ChIP_ZNF239_K562_ENCSR955PBS_counts_pattern_9.n_29-vs-ZNF239-201.alignment counts-znf_b1h_alignment/ZNF239-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR072PWP_ChIP_ZNF24_GM12878_ENCSR696HRR_counts_pattern_0.n_79-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR072PWP_ChIP_ZNF24_GM12878_ENCSR696HRR_counts_pattern_1.n_25-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR072PWP_ChIP_ZNF24_GM12878_ENCSR696HRR_counts_pattern_2.n_25-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR072PWP_ChIP_ZNF24_GM12878_ENCSR696HRR_counts_pattern_3.n_22-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR072PWP_ChIP_ZNF24_GM12878_ENCSR696HRR_counts_pattern_4.n_22-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR099NCH_ChIP_ZNF24_K562_ENCSR622JDV_counts_pattern_0.n_32-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR099NCH_ChIP_ZNF24_K562_ENCSR622JDV_counts_pattern_1.n_26-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR099NCH_ChIP_ZNF24_K562_ENCSR622JDV_counts_pattern_2.n_25-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR099NCH_ChIP_ZNF24_K562_ENCSR622JDV_counts_pattern_3.n_24-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR099NCH_ChIP_ZNF24_K562_ENCSR622JDV_counts_pattern_4.n_21-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR099NCH_ChIP_ZNF24_K562_ENCSR622JDV_counts_pattern_5.n_21-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR099NCH_ChIP_ZNF24_K562_ENCSR622JDV_counts_pattern_6.n_20-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR117WTM_ChIP_ZNF24_K562_ENCSR536QWE_counts_pattern_0.n_358-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR117WTM_ChIP_ZNF24_K562_ENCSR536QWE_counts_pattern_1.n_316-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR117WTM_ChIP_ZNF24_K562_ENCSR536QWE_counts_pattern_2.n_149-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR117WTM_ChIP_ZNF24_K562_ENCSR536QWE_counts_pattern_3.n_79-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR117WTM_ChIP_ZNF24_K562_ENCSR536QWE_counts_pattern_4.n_37-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR117WTM_ChIP_ZNF24_K562_ENCSR536QWE_counts_pattern_5.n_29-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR117WTM_ChIP_ZNF24_K562_ENCSR536QWE_counts_pattern_6.n_25-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR117WTM_ChIP_ZNF24_K562_ENCSR536QWE_counts_pattern_7.n_21-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR385AHH_ChIP_ZNF24_K562_ENCSR803RKQ_counts_pattern_0.n_528-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR385AHH_ChIP_ZNF24_K562_ENCSR803RKQ_counts_pattern_10.n_31-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR385AHH_ChIP_ZNF24_K562_ENCSR803RKQ_counts_pattern_11.n_22-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR385AHH_ChIP_ZNF24_K562_ENCSR803RKQ_counts_pattern_1.n_267-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR385AHH_ChIP_ZNF24_K562_ENCSR803RKQ_counts_pattern_2.n_116-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR385AHH_ChIP_ZNF24_K562_ENCSR803RKQ_counts_pattern_3.n_92-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR385AHH_ChIP_ZNF24_K562_ENCSR803RKQ_counts_pattern_4.n_83-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR385AHH_ChIP_ZNF24_K562_ENCSR803RKQ_counts_pattern_5.n_59-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR385AHH_ChIP_ZNF24_K562_ENCSR803RKQ_counts_pattern_6.n_52-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR385AHH_ChIP_ZNF24_K562_ENCSR803RKQ_counts_pattern_7.n_46-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR385AHH_ChIP_ZNF24_K562_ENCSR803RKQ_counts_pattern_8.n_42-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR385AHH_ChIP_ZNF24_K562_ENCSR803RKQ_counts_pattern_9.n_35-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR695EQB_ChIP_ZNF24_K562_ENCSR606DQT_counts_pattern_0.n_30-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR695EQB_ChIP_ZNF24_K562_ENCSR606DQT_counts_pattern_1.n_29-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR695EQB_ChIP_ZNF24_K562_ENCSR606DQT_counts_pattern_2.n_25-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR695EQB_ChIP_ZNF24_K562_ENCSR606DQT_counts_pattern_3.n_22-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR695EQB_ChIP_ZNF24_K562_ENCSR606DQT_counts_pattern_4.n_20-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR791AGT_ChIP_ZNF24_HepG2_ENCSR109TRH_counts_pattern_0.n_32-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR791AGT_ChIP_ZNF24_HepG2_ENCSR109TRH_counts_pattern_1.n_22-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR791AGT_ChIP_ZNF24_HepG2_ENCSR109TRH_counts_pattern_2.n_21-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR072PWP_ChIP_ZNF24_GM12878_ENCSR696HRR_counts_pattern_0.n_5351-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR072PWP_ChIP_ZNF24_GM12878_ENCSR696HRR_counts_pattern_10.n_50-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR072PWP_ChIP_ZNF24_GM12878_ENCSR696HRR_counts_pattern_11.n_41-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR072PWP_ChIP_ZNF24_GM12878_ENCSR696HRR_counts_pattern_12.n_36-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR072PWP_ChIP_ZNF24_GM12878_ENCSR696HRR_counts_pattern_13.n_34-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR072PWP_ChIP_ZNF24_GM12878_ENCSR696HRR_counts_pattern_14.n_27-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR072PWP_ChIP_ZNF24_GM12878_ENCSR696HRR_counts_pattern_15.n_23-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR072PWP_ChIP_ZNF24_GM12878_ENCSR696HRR_counts_pattern_16.n_23-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR072PWP_ChIP_ZNF24_GM12878_ENCSR696HRR_counts_pattern_17.n_21-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR072PWP_ChIP_ZNF24_GM12878_ENCSR696HRR_counts_pattern_1.n_3507-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR072PWP_ChIP_ZNF24_GM12878_ENCSR696HRR_counts_pattern_2.n_2761-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR072PWP_ChIP_ZNF24_GM12878_ENCSR696HRR_counts_pattern_3.n_1315-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR072PWP_ChIP_ZNF24_GM12878_ENCSR696HRR_counts_pattern_4.n_801-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR072PWP_ChIP_ZNF24_GM12878_ENCSR696HRR_counts_pattern_5.n_722-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR072PWP_ChIP_ZNF24_GM12878_ENCSR696HRR_counts_pattern_6.n_696-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR072PWP_ChIP_ZNF24_GM12878_ENCSR696HRR_counts_pattern_7.n_295-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR072PWP_ChIP_ZNF24_GM12878_ENCSR696HRR_counts_pattern_8.n_227-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR072PWP_ChIP_ZNF24_GM12878_ENCSR696HRR_counts_pattern_9.n_128-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR099NCH_ChIP_ZNF24_K562_ENCSR622JDV_counts_pattern_0.n_8622-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR099NCH_ChIP_ZNF24_K562_ENCSR622JDV_counts_pattern_10.n_52-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR099NCH_ChIP_ZNF24_K562_ENCSR622JDV_counts_pattern_11.n_41-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR099NCH_ChIP_ZNF24_K562_ENCSR622JDV_counts_pattern_12.n_35-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR099NCH_ChIP_ZNF24_K562_ENCSR622JDV_counts_pattern_13.n_28-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR099NCH_ChIP_ZNF24_K562_ENCSR622JDV_counts_pattern_14.n_27-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR099NCH_ChIP_ZNF24_K562_ENCSR622JDV_counts_pattern_1.n_4199-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR099NCH_ChIP_ZNF24_K562_ENCSR622JDV_counts_pattern_2.n_1248-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR099NCH_ChIP_ZNF24_K562_ENCSR622JDV_counts_pattern_3.n_601-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR099NCH_ChIP_ZNF24_K562_ENCSR622JDV_counts_pattern_4.n_342-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR099NCH_ChIP_ZNF24_K562_ENCSR622JDV_counts_pattern_5.n_274-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR099NCH_ChIP_ZNF24_K562_ENCSR622JDV_counts_pattern_6.n_207-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR099NCH_ChIP_ZNF24_K562_ENCSR622JDV_counts_pattern_7.n_116-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR099NCH_ChIP_ZNF24_K562_ENCSR622JDV_counts_pattern_8.n_68-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR099NCH_ChIP_ZNF24_K562_ENCSR622JDV_counts_pattern_9.n_65-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR117WTM_ChIP_ZNF24_K562_ENCSR536QWE_counts_pattern_0.n_3874-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR117WTM_ChIP_ZNF24_K562_ENCSR536QWE_counts_pattern_10.n_49-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR117WTM_ChIP_ZNF24_K562_ENCSR536QWE_counts_pattern_1.n_3588-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR117WTM_ChIP_ZNF24_K562_ENCSR536QWE_counts_pattern_2.n_3370-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR117WTM_ChIP_ZNF24_K562_ENCSR536QWE_counts_pattern_3.n_1533-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR117WTM_ChIP_ZNF24_K562_ENCSR536QWE_counts_pattern_4.n_599-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR117WTM_ChIP_ZNF24_K562_ENCSR536QWE_counts_pattern_5.n_393-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR117WTM_ChIP_ZNF24_K562_ENCSR536QWE_counts_pattern_6.n_199-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR117WTM_ChIP_ZNF24_K562_ENCSR536QWE_counts_pattern_7.n_177-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR117WTM_ChIP_ZNF24_K562_ENCSR536QWE_counts_pattern_8.n_68-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR117WTM_ChIP_ZNF24_K562_ENCSR536QWE_counts_pattern_9.n_51-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR362NWP_ChIP_ZNF24_HepG2_ENCSR179TNV_counts_pattern_0.n_1752-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR362NWP_ChIP_ZNF24_HepG2_ENCSR179TNV_counts_pattern_1.n_405-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR362NWP_ChIP_ZNF24_HepG2_ENCSR179TNV_counts_pattern_2.n_216-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR362NWP_ChIP_ZNF24_HepG2_ENCSR179TNV_counts_pattern_3.n_184-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR362NWP_ChIP_ZNF24_HepG2_ENCSR179TNV_counts_pattern_4.n_74-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR362NWP_ChIP_ZNF24_HepG2_ENCSR179TNV_counts_pattern_5.n_64-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR362NWP_ChIP_ZNF24_HepG2_ENCSR179TNV_counts_pattern_6.n_44-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR385AHH_ChIP_ZNF24_K562_ENCSR803RKQ_counts_pattern_0.n_4895-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR385AHH_ChIP_ZNF24_K562_ENCSR803RKQ_counts_pattern_10.n_26-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR385AHH_ChIP_ZNF24_K562_ENCSR803RKQ_counts_pattern_11.n_23-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR385AHH_ChIP_ZNF24_K562_ENCSR803RKQ_counts_pattern_1.n_3085-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR385AHH_ChIP_ZNF24_K562_ENCSR803RKQ_counts_pattern_2.n_1754-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR385AHH_ChIP_ZNF24_K562_ENCSR803RKQ_counts_pattern_3.n_908-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR385AHH_ChIP_ZNF24_K562_ENCSR803RKQ_counts_pattern_4.n_887-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR385AHH_ChIP_ZNF24_K562_ENCSR803RKQ_counts_pattern_5.n_695-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR385AHH_ChIP_ZNF24_K562_ENCSR803RKQ_counts_pattern_6.n_454-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR385AHH_ChIP_ZNF24_K562_ENCSR803RKQ_counts_pattern_7.n_348-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR385AHH_ChIP_ZNF24_K562_ENCSR803RKQ_counts_pattern_8.n_68-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR385AHH_ChIP_ZNF24_K562_ENCSR803RKQ_counts_pattern_9.n_29-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR503VTG_ChIP_ZNF24_MCF-7_ENCSR910FKH_counts_pattern_0.n_2362-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR503VTG_ChIP_ZNF24_MCF-7_ENCSR910FKH_counts_pattern_1.n_1815-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR503VTG_ChIP_ZNF24_MCF-7_ENCSR910FKH_counts_pattern_2.n_1582-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR503VTG_ChIP_ZNF24_MCF-7_ENCSR910FKH_counts_pattern_3.n_1033-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR503VTG_ChIP_ZNF24_MCF-7_ENCSR910FKH_counts_pattern_4.n_1025-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR503VTG_ChIP_ZNF24_MCF-7_ENCSR910FKH_counts_pattern_5.n_341-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR503VTG_ChIP_ZNF24_MCF-7_ENCSR910FKH_counts_pattern_6.n_289-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR503VTG_ChIP_ZNF24_MCF-7_ENCSR910FKH_counts_pattern_7.n_193-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR503VTG_ChIP_ZNF24_MCF-7_ENCSR910FKH_counts_pattern_8.n_42-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR503VTG_ChIP_ZNF24_MCF-7_ENCSR910FKH_counts_pattern_9.n_32-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR695EQB_ChIP_ZNF24_K562_ENCSR606DQT_counts_pattern_0.n_7046-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR695EQB_ChIP_ZNF24_K562_ENCSR606DQT_counts_pattern_10.n_154-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR695EQB_ChIP_ZNF24_K562_ENCSR606DQT_counts_pattern_11.n_114-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR695EQB_ChIP_ZNF24_K562_ENCSR606DQT_counts_pattern_12.n_82-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR695EQB_ChIP_ZNF24_K562_ENCSR606DQT_counts_pattern_13.n_65-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR695EQB_ChIP_ZNF24_K562_ENCSR606DQT_counts_pattern_14.n_62-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR695EQB_ChIP_ZNF24_K562_ENCSR606DQT_counts_pattern_15.n_61-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR695EQB_ChIP_ZNF24_K562_ENCSR606DQT_counts_pattern_16.n_54-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR695EQB_ChIP_ZNF24_K562_ENCSR606DQT_counts_pattern_17.n_54-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR695EQB_ChIP_ZNF24_K562_ENCSR606DQT_counts_pattern_18.n_35-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR695EQB_ChIP_ZNF24_K562_ENCSR606DQT_counts_pattern_19.n_27-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR695EQB_ChIP_ZNF24_K562_ENCSR606DQT_counts_pattern_1.n_4010-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR695EQB_ChIP_ZNF24_K562_ENCSR606DQT_counts_pattern_20.n_21-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR695EQB_ChIP_ZNF24_K562_ENCSR606DQT_counts_pattern_21.n_21-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR695EQB_ChIP_ZNF24_K562_ENCSR606DQT_counts_pattern_2.n_2664-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR695EQB_ChIP_ZNF24_K562_ENCSR606DQT_counts_pattern_3.n_1698-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR695EQB_ChIP_ZNF24_K562_ENCSR606DQT_counts_pattern_4.n_1001-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR695EQB_ChIP_ZNF24_K562_ENCSR606DQT_counts_pattern_5.n_512-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR695EQB_ChIP_ZNF24_K562_ENCSR606DQT_counts_pattern_6.n_428-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR695EQB_ChIP_ZNF24_K562_ENCSR606DQT_counts_pattern_7.n_379-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR695EQB_ChIP_ZNF24_K562_ENCSR606DQT_counts_pattern_8.n_327-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR695EQB_ChIP_ZNF24_K562_ENCSR606DQT_counts_pattern_9.n_289-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR791AGT_ChIP_ZNF24_HepG2_ENCSR109TRH_counts_pattern_0.n_1796-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR791AGT_ChIP_ZNF24_HepG2_ENCSR109TRH_counts_pattern_1.n_288-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR791AGT_ChIP_ZNF24_HepG2_ENCSR109TRH_counts_pattern_2.n_220-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR791AGT_ChIP_ZNF24_HepG2_ENCSR109TRH_counts_pattern_3.n_114-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR791AGT_ChIP_ZNF24_HepG2_ENCSR109TRH_counts_pattern_4.n_85-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR791AGT_ChIP_ZNF24_HepG2_ENCSR109TRH_counts_pattern_5.n_64-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR791AGT_ChIP_ZNF24_HepG2_ENCSR109TRH_counts_pattern_6.n_59-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR791AGT_ChIP_ZNF24_HepG2_ENCSR109TRH_counts_pattern_7.n_41-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR791AGT_ChIP_ZNF24_HepG2_ENCSR109TRH_counts_pattern_8.n_37-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR984MDV_ChIP_ZNF24_HEK293_ENCSR012PCW_counts_pattern_0.n_3381-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR984MDV_ChIP_ZNF24_HEK293_ENCSR012PCW_counts_pattern_10.n_115-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR984MDV_ChIP_ZNF24_HEK293_ENCSR012PCW_counts_pattern_11.n_86-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR984MDV_ChIP_ZNF24_HEK293_ENCSR012PCW_counts_pattern_12.n_67-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR984MDV_ChIP_ZNF24_HEK293_ENCSR012PCW_counts_pattern_13.n_59-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR984MDV_ChIP_ZNF24_HEK293_ENCSR012PCW_counts_pattern_14.n_33-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR984MDV_ChIP_ZNF24_HEK293_ENCSR012PCW_counts_pattern_15.n_28-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR984MDV_ChIP_ZNF24_HEK293_ENCSR012PCW_counts_pattern_16.n_21-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR984MDV_ChIP_ZNF24_HEK293_ENCSR012PCW_counts_pattern_1.n_3264-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR984MDV_ChIP_ZNF24_HEK293_ENCSR012PCW_counts_pattern_2.n_1175-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR984MDV_ChIP_ZNF24_HEK293_ENCSR012PCW_counts_pattern_3.n_353-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR984MDV_ChIP_ZNF24_HEK293_ENCSR012PCW_counts_pattern_4.n_323-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR984MDV_ChIP_ZNF24_HEK293_ENCSR012PCW_counts_pattern_5.n_294-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR984MDV_ChIP_ZNF24_HEK293_ENCSR012PCW_counts_pattern_6.n_213-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR984MDV_ChIP_ZNF24_HEK293_ENCSR012PCW_counts_pattern_7.n_192-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR984MDV_ChIP_ZNF24_HEK293_ENCSR012PCW_counts_pattern_8.n_123-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR984MDV_ChIP_ZNF24_HEK293_ENCSR012PCW_counts_pattern_9.n_116-vs-ZNF24-201.alignment counts-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF248-201/ChipExo_models_ZNF248_counts-pos.pattern_0.n_6513-vs-ZNF248-201.alignment counts-znf_b1h_alignment/ZNF248-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF248-201/ChipExo_models_ZNF248_counts-pos.pattern_1.n_29-vs-ZNF248-201.alignment counts-znf_b1h_alignment/ZNF248-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF248-201/pos_patterns.ENCSR338SEM_ChIP_ZNF248_HEK293_ENCSR594BQE_counts_pattern_0.n_626-vs-ZNF248-201.alignment counts-znf_b1h_alignment/ZNF248-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF248-201/pos_patterns.ENCSR338SEM_ChIP_ZNF248_HEK293_ENCSR594BQE_counts_pattern_1.n_228-vs-ZNF248-201.alignment counts-znf_b1h_alignment/ZNF248-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF250-201/Hughes_GR_models_ZNF250_counts-neg.pattern_0.n_40-vs-ZNF250-201.alignment counts-znf_b1h_alignment/ZNF250-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF250-201/Hughes_GR_models_ZNF250_counts-neg.pattern_1.n_32-vs-ZNF250-201.alignment counts-znf_b1h_alignment/ZNF250-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF250-201/Hughes_GR_models_ZNF250_counts-neg.pattern_2.n_28-vs-ZNF250-201.alignment counts-znf_b1h_alignment/ZNF250-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF250-201/Hughes_GR_models_ZNF250_counts-neg.pattern_3.n_22-vs-ZNF250-201.alignment counts-znf_b1h_alignment/ZNF250-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF250-201/Hughes_GR_models_ZNF250_counts-pos.pattern_0.n_218-vs-ZNF250-201.alignment counts-znf_b1h_alignment/ZNF250-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF250-201/Hughes_GR_models_ZNF250_counts-pos.pattern_10.n_31-vs-ZNF250-201.alignment counts-znf_b1h_alignment/ZNF250-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF250-201/Hughes_GR_models_ZNF250_counts-pos.pattern_11.n_25-vs-ZNF250-201.alignment counts-znf_b1h_alignment/ZNF250-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF250-201/Hughes_GR_models_ZNF250_counts-pos.pattern_1.n_124-vs-ZNF250-201.alignment counts-znf_b1h_alignment/ZNF250-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF250-201/Hughes_GR_models_ZNF250_counts-pos.pattern_2.n_82-vs-ZNF250-201.alignment counts-znf_b1h_alignment/ZNF250-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF250-201/Hughes_GR_models_ZNF250_counts-pos.pattern_3.n_79-vs-ZNF250-201.alignment counts-znf_b1h_alignment/ZNF250-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF250-201/Hughes_GR_models_ZNF250_counts-pos.pattern_4.n_72-vs-ZNF250-201.alignment counts-znf_b1h_alignment/ZNF250-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF250-201/Hughes_GR_models_ZNF250_counts-pos.pattern_5.n_68-vs-ZNF250-201.alignment counts-znf_b1h_alignment/ZNF250-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF250-201/Hughes_GR_models_ZNF250_counts-pos.pattern_6.n_64-vs-ZNF250-201.alignment counts-znf_b1h_alignment/ZNF250-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF250-201/Hughes_GR_models_ZNF250_counts-pos.pattern_7.n_63-vs-ZNF250-201.alignment counts-znf_b1h_alignment/ZNF250-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF250-201/Hughes_GR_models_ZNF250_counts-pos.pattern_8.n_50-vs-ZNF250-201.alignment counts-znf_b1h_alignment/ZNF250-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF250-201/Hughes_GR_models_ZNF250_counts-pos.pattern_9.n_41-vs-ZNF250-201.alignment counts-znf_b1h_alignment/ZNF250-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF250-201/Hughes_NB_models_ZNF250_counts-pos.pattern_0.n_4327-vs-ZNF250-201.alignment counts-znf_b1h_alignment/ZNF250-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF250-201/Hughes_NB_models_ZNF250_counts-pos.pattern_1.n_273-vs-ZNF250-201.alignment counts-znf_b1h_alignment/ZNF250-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF250-201/Hughes_NB_models_ZNF250_counts-pos.pattern_2.n_63-vs-ZNF250-201.alignment counts-znf_b1h_alignment/ZNF250-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF250-201/Hughes_NB_models_ZNF250_counts-pos.pattern_3.n_22-vs-ZNF250-201.alignment counts-znf_b1h_alignment/ZNF250-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF251-201/neg_patterns.ENCSR605KVV_ChIP_ZNF251_HepG2_ENCSR452AEX_counts_pattern_0.n_82-vs-ZNF251-201.alignment counts-znf_b1h_alignment/ZNF251-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF251-201/neg_patterns.ENCSR605KVV_ChIP_ZNF251_HepG2_ENCSR452AEX_counts_pattern_1.n_54-vs-ZNF251-201.alignment counts-znf_b1h_alignment/ZNF251-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF251-201/pos_patterns.ENCSR605KVV_ChIP_ZNF251_HepG2_ENCSR452AEX_counts_pattern_0.n_1482-vs-ZNF251-201.alignment counts-znf_b1h_alignment/ZNF251-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF251-201/pos_patterns.ENCSR605KVV_ChIP_ZNF251_HepG2_ENCSR452AEX_counts_pattern_10.n_48-vs-ZNF251-201.alignment counts-znf_b1h_alignment/ZNF251-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF251-201/pos_patterns.ENCSR605KVV_ChIP_ZNF251_HepG2_ENCSR452AEX_counts_pattern_11.n_46-vs-ZNF251-201.alignment counts-znf_b1h_alignment/ZNF251-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF251-201/pos_patterns.ENCSR605KVV_ChIP_ZNF251_HepG2_ENCSR452AEX_counts_pattern_12.n_43-vs-ZNF251-201.alignment counts-znf_b1h_alignment/ZNF251-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF251-201/pos_patterns.ENCSR605KVV_ChIP_ZNF251_HepG2_ENCSR452AEX_counts_pattern_13.n_41-vs-ZNF251-201.alignment counts-znf_b1h_alignment/ZNF251-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF251-201/pos_patterns.ENCSR605KVV_ChIP_ZNF251_HepG2_ENCSR452AEX_counts_pattern_1.n_420-vs-ZNF251-201.alignment counts-znf_b1h_alignment/ZNF251-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF251-201/pos_patterns.ENCSR605KVV_ChIP_ZNF251_HepG2_ENCSR452AEX_counts_pattern_2.n_266-vs-ZNF251-201.alignment counts-znf_b1h_alignment/ZNF251-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF251-201/pos_patterns.ENCSR605KVV_ChIP_ZNF251_HepG2_ENCSR452AEX_counts_pattern_3.n_167-vs-ZNF251-201.alignment counts-znf_b1h_alignment/ZNF251-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF251-201/pos_patterns.ENCSR605KVV_ChIP_ZNF251_HepG2_ENCSR452AEX_counts_pattern_4.n_149-vs-ZNF251-201.alignment counts-znf_b1h_alignment/ZNF251-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF251-201/pos_patterns.ENCSR605KVV_ChIP_ZNF251_HepG2_ENCSR452AEX_counts_pattern_5.n_135-vs-ZNF251-201.alignment counts-znf_b1h_alignment/ZNF251-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF251-201/pos_patterns.ENCSR605KVV_ChIP_ZNF251_HepG2_ENCSR452AEX_counts_pattern_6.n_120-vs-ZNF251-201.alignment counts-znf_b1h_alignment/ZNF251-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF251-201/pos_patterns.ENCSR605KVV_ChIP_ZNF251_HepG2_ENCSR452AEX_counts_pattern_7.n_105-vs-ZNF251-201.alignment counts-znf_b1h_alignment/ZNF251-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF251-201/pos_patterns.ENCSR605KVV_ChIP_ZNF251_HepG2_ENCSR452AEX_counts_pattern_8.n_68-vs-ZNF251-201.alignment counts-znf_b1h_alignment/ZNF251-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF251-201/pos_patterns.ENCSR605KVV_ChIP_ZNF251_HepG2_ENCSR452AEX_counts_pattern_9.n_67-vs-ZNF251-201.alignment counts-znf_b1h_alignment/ZNF251-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF25-201/ChipExo_models_ZNF25_counts-pos.pattern_0.n_97-vs-ZNF25-201.alignment counts-znf_b1h_alignment/ZNF25-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF25-201/ChipExo_models_ZNF25_counts-pos.pattern_1.n_43-vs-ZNF25-201.alignment counts-znf_b1h_alignment/ZNF25-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF25-201/pos_patterns.ENCSR384SQB_ChIP_ZNF25_HepG2_ENCSR662YFU_counts_pattern_0.n_1143-vs-ZNF25-201.alignment counts-znf_b1h_alignment/ZNF25-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF25-201/pos_patterns.ENCSR384SQB_ChIP_ZNF25_HepG2_ENCSR662YFU_counts_pattern_10.n_201-vs-ZNF25-201.alignment counts-znf_b1h_alignment/ZNF25-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF25-201/pos_patterns.ENCSR384SQB_ChIP_ZNF25_HepG2_ENCSR662YFU_counts_pattern_11.n_172-vs-ZNF25-201.alignment counts-znf_b1h_alignment/ZNF25-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF25-201/pos_patterns.ENCSR384SQB_ChIP_ZNF25_HepG2_ENCSR662YFU_counts_pattern_12.n_90-vs-ZNF25-201.alignment counts-znf_b1h_alignment/ZNF25-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF25-201/pos_patterns.ENCSR384SQB_ChIP_ZNF25_HepG2_ENCSR662YFU_counts_pattern_13.n_90-vs-ZNF25-201.alignment counts-znf_b1h_alignment/ZNF25-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF25-201/pos_patterns.ENCSR384SQB_ChIP_ZNF25_HepG2_ENCSR662YFU_counts_pattern_14.n_72-vs-ZNF25-201.alignment counts-znf_b1h_alignment/ZNF25-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF25-201/pos_patterns.ENCSR384SQB_ChIP_ZNF25_HepG2_ENCSR662YFU_counts_pattern_15.n_62-vs-ZNF25-201.alignment counts-znf_b1h_alignment/ZNF25-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF25-201/pos_patterns.ENCSR384SQB_ChIP_ZNF25_HepG2_ENCSR662YFU_counts_pattern_1.n_1045-vs-ZNF25-201.alignment counts-znf_b1h_alignment/ZNF25-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF25-201/pos_patterns.ENCSR384SQB_ChIP_ZNF25_HepG2_ENCSR662YFU_counts_pattern_2.n_825-vs-ZNF25-201.alignment counts-znf_b1h_alignment/ZNF25-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF25-201/pos_patterns.ENCSR384SQB_ChIP_ZNF25_HepG2_ENCSR662YFU_counts_pattern_3.n_633-vs-ZNF25-201.alignment counts-znf_b1h_alignment/ZNF25-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF25-201/pos_patterns.ENCSR384SQB_ChIP_ZNF25_HepG2_ENCSR662YFU_counts_pattern_4.n_360-vs-ZNF25-201.alignment counts-znf_b1h_alignment/ZNF25-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF25-201/pos_patterns.ENCSR384SQB_ChIP_ZNF25_HepG2_ENCSR662YFU_counts_pattern_5.n_257-vs-ZNF25-201.alignment counts-znf_b1h_alignment/ZNF25-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF25-201/pos_patterns.ENCSR384SQB_ChIP_ZNF25_HepG2_ENCSR662YFU_counts_pattern_6.n_253-vs-ZNF25-201.alignment counts-znf_b1h_alignment/ZNF25-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF25-201/pos_patterns.ENCSR384SQB_ChIP_ZNF25_HepG2_ENCSR662YFU_counts_pattern_7.n_232-vs-ZNF25-201.alignment counts-znf_b1h_alignment/ZNF25-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF25-201/pos_patterns.ENCSR384SQB_ChIP_ZNF25_HepG2_ENCSR662YFU_counts_pattern_8.n_227-vs-ZNF25-201.alignment counts-znf_b1h_alignment/ZNF25-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF25-201/pos_patterns.ENCSR384SQB_ChIP_ZNF25_HepG2_ENCSR662YFU_counts_pattern_9.n_227-vs-ZNF25-201.alignment counts-znf_b1h_alignment/ZNF25-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/neg_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_0.n_105-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/neg_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_10.n_45-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/neg_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_11.n_39-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/neg_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_12.n_38-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/neg_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_13.n_37-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/neg_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_14.n_31-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/neg_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_15.n_29-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/neg_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_16.n_24-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/neg_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_17.n_23-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/neg_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_1.n_94-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/neg_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_2.n_89-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/neg_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_3.n_87-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/neg_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_4.n_80-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/neg_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_5.n_77-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/neg_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_6.n_65-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/neg_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_7.n_65-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/neg_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_8.n_51-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/neg_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_9.n_48-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/neg_patterns.ENCSR569GKR_ChIP_ZNF253_HepG2_ENCSR454FFH_counts_pattern_0.n_42-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/neg_patterns.ENCSR569GKR_ChIP_ZNF253_HepG2_ENCSR454FFH_counts_pattern_1.n_33-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/neg_patterns.ENCSR569GKR_ChIP_ZNF253_HepG2_ENCSR454FFH_counts_pattern_2.n_28-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/pos_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_0.n_130-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/pos_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_10.n_43-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/pos_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_11.n_40-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/pos_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_12.n_39-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/pos_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_13.n_37-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/pos_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_14.n_33-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/pos_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_15.n_33-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/pos_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_16.n_24-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/pos_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_1.n_71-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/pos_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_2.n_59-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/pos_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_3.n_58-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/pos_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_4.n_54-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/pos_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_5.n_49-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/pos_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_6.n_47-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/pos_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_7.n_45-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/pos_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_8.n_45-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/pos_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_9.n_45-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/pos_patterns.ENCSR569GKR_ChIP_ZNF253_HepG2_ENCSR454FFH_counts_pattern_0.n_2222-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/pos_patterns.ENCSR569GKR_ChIP_ZNF253_HepG2_ENCSR454FFH_counts_pattern_10.n_117-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/pos_patterns.ENCSR569GKR_ChIP_ZNF253_HepG2_ENCSR454FFH_counts_pattern_11.n_84-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/pos_patterns.ENCSR569GKR_ChIP_ZNF253_HepG2_ENCSR454FFH_counts_pattern_12.n_79-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/pos_patterns.ENCSR569GKR_ChIP_ZNF253_HepG2_ENCSR454FFH_counts_pattern_13.n_63-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/pos_patterns.ENCSR569GKR_ChIP_ZNF253_HepG2_ENCSR454FFH_counts_pattern_14.n_53-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/pos_patterns.ENCSR569GKR_ChIP_ZNF253_HepG2_ENCSR454FFH_counts_pattern_15.n_42-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/pos_patterns.ENCSR569GKR_ChIP_ZNF253_HepG2_ENCSR454FFH_counts_pattern_16.n_41-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/pos_patterns.ENCSR569GKR_ChIP_ZNF253_HepG2_ENCSR454FFH_counts_pattern_1.n_916-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/pos_patterns.ENCSR569GKR_ChIP_ZNF253_HepG2_ENCSR454FFH_counts_pattern_2.n_420-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/pos_patterns.ENCSR569GKR_ChIP_ZNF253_HepG2_ENCSR454FFH_counts_pattern_3.n_207-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/pos_patterns.ENCSR569GKR_ChIP_ZNF253_HepG2_ENCSR454FFH_counts_pattern_4.n_207-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/pos_patterns.ENCSR569GKR_ChIP_ZNF253_HepG2_ENCSR454FFH_counts_pattern_5.n_193-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/pos_patterns.ENCSR569GKR_ChIP_ZNF253_HepG2_ENCSR454FFH_counts_pattern_6.n_158-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/pos_patterns.ENCSR569GKR_ChIP_ZNF253_HepG2_ENCSR454FFH_counts_pattern_7.n_150-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/pos_patterns.ENCSR569GKR_ChIP_ZNF253_HepG2_ENCSR454FFH_counts_pattern_8.n_132-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-201/pos_patterns.ENCSR569GKR_ChIP_ZNF253_HepG2_ENCSR454FFH_counts_pattern_9.n_119-vs-ZNF253-201.alignment counts-znf_b1h_alignment/ZNF253-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/neg_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_0.n_105-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/neg_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_10.n_45-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/neg_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_11.n_39-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/neg_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_12.n_38-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/neg_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_13.n_37-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/neg_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_14.n_31-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/neg_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_15.n_29-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/neg_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_16.n_24-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/neg_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_17.n_23-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/neg_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_1.n_94-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/neg_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_2.n_89-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/neg_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_3.n_87-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/neg_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_4.n_80-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/neg_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_5.n_77-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/neg_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_6.n_65-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/neg_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_7.n_65-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/neg_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_8.n_51-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/neg_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_9.n_48-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/neg_patterns.ENCSR569GKR_ChIP_ZNF253_HepG2_ENCSR454FFH_counts_pattern_0.n_42-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/neg_patterns.ENCSR569GKR_ChIP_ZNF253_HepG2_ENCSR454FFH_counts_pattern_1.n_33-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/neg_patterns.ENCSR569GKR_ChIP_ZNF253_HepG2_ENCSR454FFH_counts_pattern_2.n_28-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/pos_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_0.n_130-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/pos_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_10.n_43-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/pos_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_11.n_40-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/pos_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_12.n_39-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/pos_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_13.n_37-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/pos_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_14.n_33-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/pos_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_15.n_33-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/pos_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_16.n_24-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/pos_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_1.n_71-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/pos_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_2.n_59-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/pos_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_3.n_58-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/pos_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_4.n_54-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/pos_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_5.n_49-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/pos_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_6.n_47-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/pos_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_7.n_45-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/pos_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_8.n_45-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/pos_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_counts_pattern_9.n_45-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/pos_patterns.ENCSR569GKR_ChIP_ZNF253_HepG2_ENCSR454FFH_counts_pattern_0.n_2222-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/pos_patterns.ENCSR569GKR_ChIP_ZNF253_HepG2_ENCSR454FFH_counts_pattern_10.n_117-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/pos_patterns.ENCSR569GKR_ChIP_ZNF253_HepG2_ENCSR454FFH_counts_pattern_11.n_84-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/pos_patterns.ENCSR569GKR_ChIP_ZNF253_HepG2_ENCSR454FFH_counts_pattern_12.n_79-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/pos_patterns.ENCSR569GKR_ChIP_ZNF253_HepG2_ENCSR454FFH_counts_pattern_13.n_63-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/pos_patterns.ENCSR569GKR_ChIP_ZNF253_HepG2_ENCSR454FFH_counts_pattern_14.n_53-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/pos_patterns.ENCSR569GKR_ChIP_ZNF253_HepG2_ENCSR454FFH_counts_pattern_15.n_42-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/pos_patterns.ENCSR569GKR_ChIP_ZNF253_HepG2_ENCSR454FFH_counts_pattern_16.n_41-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/pos_patterns.ENCSR569GKR_ChIP_ZNF253_HepG2_ENCSR454FFH_counts_pattern_1.n_916-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/pos_patterns.ENCSR569GKR_ChIP_ZNF253_HepG2_ENCSR454FFH_counts_pattern_2.n_420-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/pos_patterns.ENCSR569GKR_ChIP_ZNF253_HepG2_ENCSR454FFH_counts_pattern_3.n_207-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/pos_patterns.ENCSR569GKR_ChIP_ZNF253_HepG2_ENCSR454FFH_counts_pattern_4.n_207-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/pos_patterns.ENCSR569GKR_ChIP_ZNF253_HepG2_ENCSR454FFH_counts_pattern_5.n_193-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/pos_patterns.ENCSR569GKR_ChIP_ZNF253_HepG2_ENCSR454FFH_counts_pattern_6.n_158-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/pos_patterns.ENCSR569GKR_ChIP_ZNF253_HepG2_ENCSR454FFH_counts_pattern_7.n_150-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/pos_patterns.ENCSR569GKR_ChIP_ZNF253_HepG2_ENCSR454FFH_counts_pattern_8.n_132-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF253-205/pos_patterns.ENCSR569GKR_ChIP_ZNF253_HepG2_ENCSR454FFH_counts_pattern_9.n_119-vs-ZNF253-205.alignment counts-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF254-202/ChipExo_models_ZNF254_counts-pos.pattern_0.n_431-vs-ZNF254-202.alignment counts-znf_b1h_alignment/ZNF254-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF254-202/ChipExo_models_ZNF254_counts-pos.pattern_1.n_50-vs-ZNF254-202.alignment counts-znf_b1h_alignment/ZNF254-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF256-201/pos_patterns.ENCSR563JME_ChIP_ZNF256_HepG2_ENCSR089SSF_counts_pattern_0.n_2527-vs-ZNF256-201.alignment counts-znf_b1h_alignment/ZNF256-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF256-201/pos_patterns.ENCSR563JME_ChIP_ZNF256_HepG2_ENCSR089SSF_counts_pattern_10.n_47-vs-ZNF256-201.alignment counts-znf_b1h_alignment/ZNF256-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF256-201/pos_patterns.ENCSR563JME_ChIP_ZNF256_HepG2_ENCSR089SSF_counts_pattern_1.n_1211-vs-ZNF256-201.alignment counts-znf_b1h_alignment/ZNF256-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF256-201/pos_patterns.ENCSR563JME_ChIP_ZNF256_HepG2_ENCSR089SSF_counts_pattern_2.n_921-vs-ZNF256-201.alignment counts-znf_b1h_alignment/ZNF256-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF256-201/pos_patterns.ENCSR563JME_ChIP_ZNF256_HepG2_ENCSR089SSF_counts_pattern_3.n_446-vs-ZNF256-201.alignment counts-znf_b1h_alignment/ZNF256-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF256-201/pos_patterns.ENCSR563JME_ChIP_ZNF256_HepG2_ENCSR089SSF_counts_pattern_4.n_304-vs-ZNF256-201.alignment counts-znf_b1h_alignment/ZNF256-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF256-201/pos_patterns.ENCSR563JME_ChIP_ZNF256_HepG2_ENCSR089SSF_counts_pattern_5.n_301-vs-ZNF256-201.alignment counts-znf_b1h_alignment/ZNF256-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF256-201/pos_patterns.ENCSR563JME_ChIP_ZNF256_HepG2_ENCSR089SSF_counts_pattern_6.n_262-vs-ZNF256-201.alignment counts-znf_b1h_alignment/ZNF256-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF256-201/pos_patterns.ENCSR563JME_ChIP_ZNF256_HepG2_ENCSR089SSF_counts_pattern_7.n_102-vs-ZNF256-201.alignment counts-znf_b1h_alignment/ZNF256-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF256-201/pos_patterns.ENCSR563JME_ChIP_ZNF256_HepG2_ENCSR089SSF_counts_pattern_8.n_94-vs-ZNF256-201.alignment counts-znf_b1h_alignment/ZNF256-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF256-201/pos_patterns.ENCSR563JME_ChIP_ZNF256_HepG2_ENCSR089SSF_counts_pattern_9.n_65-vs-ZNF256-201.alignment counts-znf_b1h_alignment/ZNF256-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF257-201/ChipExo_models_ZNF257_counts-pos.pattern_0.n_10087-vs-ZNF257-201.alignment counts-znf_b1h_alignment/ZNF257-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF257-201/ChipExo_models_ZNF257_counts-pos.pattern_10.n_137-vs-ZNF257-201.alignment counts-znf_b1h_alignment/ZNF257-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF257-201/ChipExo_models_ZNF257_counts-pos.pattern_1.n_4644-vs-ZNF257-201.alignment counts-znf_b1h_alignment/ZNF257-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF257-201/ChipExo_models_ZNF257_counts-pos.pattern_2.n_3152-vs-ZNF257-201.alignment counts-znf_b1h_alignment/ZNF257-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF257-201/ChipExo_models_ZNF257_counts-pos.pattern_3.n_944-vs-ZNF257-201.alignment counts-znf_b1h_alignment/ZNF257-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF257-201/ChipExo_models_ZNF257_counts-pos.pattern_4.n_283-vs-ZNF257-201.alignment counts-znf_b1h_alignment/ZNF257-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF257-201/ChipExo_models_ZNF257_counts-pos.pattern_5.n_197-vs-ZNF257-201.alignment counts-znf_b1h_alignment/ZNF257-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF257-201/ChipExo_models_ZNF257_counts-pos.pattern_6.n_181-vs-ZNF257-201.alignment counts-znf_b1h_alignment/ZNF257-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF257-201/ChipExo_models_ZNF257_counts-pos.pattern_7.n_178-vs-ZNF257-201.alignment counts-znf_b1h_alignment/ZNF257-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF257-201/ChipExo_models_ZNF257_counts-pos.pattern_8.n_172-vs-ZNF257-201.alignment counts-znf_b1h_alignment/ZNF257-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF257-201/ChipExo_models_ZNF257_counts-pos.pattern_9.n_138-vs-ZNF257-201.alignment counts-znf_b1h_alignment/ZNF257-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF257-201/Hughes_GR_models_ZNF257_counts-pos.pattern_0.n_538-vs-ZNF257-201.alignment counts-znf_b1h_alignment/ZNF257-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF257-201/Hughes_GR_models_ZNF257_counts-pos.pattern_1.n_114-vs-ZNF257-201.alignment counts-znf_b1h_alignment/ZNF257-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF257-201/Hughes_GR_models_ZNF257_counts-pos.pattern_2.n_35-vs-ZNF257-201.alignment counts-znf_b1h_alignment/ZNF257-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF257-201/pos_patterns.ENCSR492FKD_ChIP_ZNF257_K562_ENCSR844XCH_counts_pattern_0.n_1964-vs-ZNF257-201.alignment counts-znf_b1h_alignment/ZNF257-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF257-201/pos_patterns.ENCSR492FKD_ChIP_ZNF257_K562_ENCSR844XCH_counts_pattern_1.n_1154-vs-ZNF257-201.alignment counts-znf_b1h_alignment/ZNF257-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF257-201/pos_patterns.ENCSR492FKD_ChIP_ZNF257_K562_ENCSR844XCH_counts_pattern_2.n_404-vs-ZNF257-201.alignment counts-znf_b1h_alignment/ZNF257-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF257-201/pos_patterns.ENCSR492FKD_ChIP_ZNF257_K562_ENCSR844XCH_counts_pattern_3.n_78-vs-ZNF257-201.alignment counts-znf_b1h_alignment/ZNF257-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF257-201/pos_patterns.ENCSR492FKD_ChIP_ZNF257_K562_ENCSR844XCH_counts_pattern_4.n_26-vs-ZNF257-201.alignment counts-znf_b1h_alignment/ZNF257-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF260-202/Hughes_GR_models_ZNF260_counts-pos.pattern_0.n_1530-vs-ZNF260-202.alignment counts-znf_b1h_alignment/ZNF260-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF260-202/pos_patterns.ENCSR024ZIS_ChIP_ZNF260_HepG2_ENCSR178UCW_counts_pattern_0.n_537-vs-ZNF260-202.alignment counts-znf_b1h_alignment/ZNF260-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF260-202/pos_patterns.ENCSR024ZIS_ChIP_ZNF260_HepG2_ENCSR178UCW_counts_pattern_1.n_490-vs-ZNF260-202.alignment counts-znf_b1h_alignment/ZNF260-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF260-202/pos_patterns.ENCSR024ZIS_ChIP_ZNF260_HepG2_ENCSR178UCW_counts_pattern_2.n_392-vs-ZNF260-202.alignment counts-znf_b1h_alignment/ZNF260-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF260-202/pos_patterns.ENCSR024ZIS_ChIP_ZNF260_HepG2_ENCSR178UCW_counts_pattern_3.n_156-vs-ZNF260-202.alignment counts-znf_b1h_alignment/ZNF260-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF260-202/pos_patterns.ENCSR024ZIS_ChIP_ZNF260_HepG2_ENCSR178UCW_counts_pattern_4.n_28-vs-ZNF260-202.alignment counts-znf_b1h_alignment/ZNF260-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF26-201/ChipExo_models_ZNF26_counts-pos.pattern_0.n_1543-vs-ZNF26-201.alignment counts-znf_b1h_alignment/ZNF26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF26-201/ChipExo_models_ZNF26_counts-pos.pattern_1.n_313-vs-ZNF26-201.alignment counts-znf_b1h_alignment/ZNF26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF26-201/ChipExo_models_ZNF26_counts-pos.pattern_2.n_161-vs-ZNF26-201.alignment counts-znf_b1h_alignment/ZNF26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF26-201/ChipExo_models_ZNF26_counts-pos.pattern_3.n_37-vs-ZNF26-201.alignment counts-znf_b1h_alignment/ZNF26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF26-201/ChipExo_models_ZNF26_counts-pos.pattern_4.n_20-vs-ZNF26-201.alignment counts-znf_b1h_alignment/ZNF26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF26-201/pos_patterns.ENCSR028EGI_ChIP_ZNF26_HEK293_ENCSR065HJU_counts_pattern_0.n_1472-vs-ZNF26-201.alignment counts-znf_b1h_alignment/ZNF26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF26-201/pos_patterns.ENCSR028EGI_ChIP_ZNF26_HEK293_ENCSR065HJU_counts_pattern_1.n_740-vs-ZNF26-201.alignment counts-znf_b1h_alignment/ZNF26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF26-201/pos_patterns.ENCSR028EGI_ChIP_ZNF26_HEK293_ENCSR065HJU_counts_pattern_2.n_143-vs-ZNF26-201.alignment counts-znf_b1h_alignment/ZNF26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF26-201/pos_patterns.ENCSR028EGI_ChIP_ZNF26_HEK293_ENCSR065HJU_counts_pattern_3.n_59-vs-ZNF26-201.alignment counts-znf_b1h_alignment/ZNF26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF26-201/pos_patterns.ENCSR028EGI_ChIP_ZNF26_HEK293_ENCSR065HJU_counts_pattern_4.n_57-vs-ZNF26-201.alignment counts-znf_b1h_alignment/ZNF26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF26-201/pos_patterns.ENCSR028EGI_ChIP_ZNF26_HEK293_ENCSR065HJU_counts_pattern_5.n_46-vs-ZNF26-201.alignment counts-znf_b1h_alignment/ZNF26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF26-201/pos_patterns.ENCSR028EGI_ChIP_ZNF26_HEK293_ENCSR065HJU_counts_pattern_6.n_36-vs-ZNF26-201.alignment counts-znf_b1h_alignment/ZNF26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF26-201/pos_patterns.ENCSR028EGI_ChIP_ZNF26_HEK293_ENCSR065HJU_counts_pattern_7.n_31-vs-ZNF26-201.alignment counts-znf_b1h_alignment/ZNF26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF26-201/pos_patterns.ENCSR028EGI_ChIP_ZNF26_HEK293_ENCSR065HJU_counts_pattern_8.n_28-vs-ZNF26-201.alignment counts-znf_b1h_alignment/ZNF26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF26-201/pos_patterns.ENCSR028EGI_ChIP_ZNF26_HEK293_ENCSR065HJU_counts_pattern_9.n_22-vs-ZNF26-201.alignment counts-znf_b1h_alignment/ZNF26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/ChipExo_models_ZNF263_counts-pos.pattern_0.n_4849-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/ChipExo_models_ZNF263_counts-pos.pattern_1.n_1538-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/ChipExo_models_ZNF263_counts-pos.pattern_2.n_373-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/ChipExo_models_ZNF263_counts-pos.pattern_3.n_259-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/ChipExo_models_ZNF263_counts-pos.pattern_4.n_131-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/ChipExo_models_ZNF263_counts-pos.pattern_5.n_58-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/ChipExo_models_ZNF263_counts-pos.pattern_6.n_26-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/ChipExo_models_ZNF263_counts-pos.pattern_7.n_24-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR000EVD_ChIP_ZNF263_HEK293_ENCSR143IUV_counts_pattern_0.n_30-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR000EVD_ChIP_ZNF263_HEK293_ENCSR143IUV_counts_pattern_1.n_25-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR000EVD_ChIP_ZNF263_HEK293_ENCSR143IUV_counts_pattern_2.n_24-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR000EVD_ChIP_ZNF263_HEK293_ENCSR143IUV_counts_pattern_3.n_23-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR000EVD_ChIP_ZNF263_HEK293_ENCSR143IUV_counts_pattern_4.n_22-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR000EVD_ChIP_ZNF263_HEK293_ENCSR143IUV_counts_pattern_5.n_22-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR000EVD_ChIP_ZNF263_HEK293_ENCSR143IUV_counts_pattern_0.n_14780-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR000EVD_ChIP_ZNF263_HEK293_ENCSR143IUV_counts_pattern_1.n_7785-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR000EVD_ChIP_ZNF263_HEK293_ENCSR143IUV_counts_pattern_2.n_2636-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR000EVD_ChIP_ZNF263_HEK293_ENCSR143IUV_counts_pattern_3.n_968-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR000EVD_ChIP_ZNF263_HEK293_ENCSR143IUV_counts_pattern_4.n_428-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR000EWN_ChIP_ZNF263_K562_ENCSR229HUB_counts_pattern_0.n_3364-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR000EWN_ChIP_ZNF263_K562_ENCSR229HUB_counts_pattern_1.n_703-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR000EWN_ChIP_ZNF263_K562_ENCSR229HUB_counts_pattern_2.n_178-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR000EWN_ChIP_ZNF263_K562_ENCSR229HUB_counts_pattern_3.n_80-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR000EWN_ChIP_ZNF263_K562_ENCSR229HUB_counts_pattern_4.n_64-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR000EWN_ChIP_ZNF263_K562_ENCSR229HUB_counts_pattern_5.n_58-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR000EWN_ChIP_ZNF263_K562_ENCSR229HUB_counts_pattern_6.n_49-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR000EWN_ChIP_ZNF263_K562_ENCSR229HUB_counts_pattern_7.n_40-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR000EWN_ChIP_ZNF263_K562_ENCSR229HUB_counts_pattern_8.n_25-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR156JWW_ChIP_ZNF263_WTC11_ENCSR162AVH_counts_pattern_0.n_3087-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR156JWW_ChIP_ZNF263_WTC11_ENCSR162AVH_counts_pattern_1.n_1606-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR156JWW_ChIP_ZNF263_WTC11_ENCSR162AVH_counts_pattern_2.n_1036-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR156JWW_ChIP_ZNF263_WTC11_ENCSR162AVH_counts_pattern_3.n_100-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR156JWW_ChIP_ZNF263_WTC11_ENCSR162AVH_counts_pattern_4.n_90-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR156JWW_ChIP_ZNF263_WTC11_ENCSR162AVH_counts_pattern_5.n_83-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR156JWW_ChIP_ZNF263_WTC11_ENCSR162AVH_counts_pattern_6.n_33-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR156JWW_ChIP_ZNF263_WTC11_ENCSR162AVH_counts_pattern_7.n_22-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR156JWW_ChIP_ZNF263_WTC11_ENCSR162AVH_counts_pattern_8.n_20-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR313MMD_ChIP_ZNF263_HepG2_ENCSR197RBG_counts_pattern_0.n_9455-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR313MMD_ChIP_ZNF263_HepG2_ENCSR197RBG_counts_pattern_10.n_58-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR313MMD_ChIP_ZNF263_HepG2_ENCSR197RBG_counts_pattern_11.n_29-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR313MMD_ChIP_ZNF263_HepG2_ENCSR197RBG_counts_pattern_12.n_20-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR313MMD_ChIP_ZNF263_HepG2_ENCSR197RBG_counts_pattern_1.n_6429-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR313MMD_ChIP_ZNF263_HepG2_ENCSR197RBG_counts_pattern_2.n_403-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR313MMD_ChIP_ZNF263_HepG2_ENCSR197RBG_counts_pattern_3.n_375-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR313MMD_ChIP_ZNF263_HepG2_ENCSR197RBG_counts_pattern_4.n_272-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR313MMD_ChIP_ZNF263_HepG2_ENCSR197RBG_counts_pattern_5.n_261-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR313MMD_ChIP_ZNF263_HepG2_ENCSR197RBG_counts_pattern_6.n_184-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR313MMD_ChIP_ZNF263_HepG2_ENCSR197RBG_counts_pattern_7.n_177-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR313MMD_ChIP_ZNF263_HepG2_ENCSR197RBG_counts_pattern_8.n_151-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR313MMD_ChIP_ZNF263_HepG2_ENCSR197RBG_counts_pattern_9.n_120-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR845GGY_ChIP_ZNF263_K562_ENCSR749YHO_counts_pattern_0.n_9801-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR845GGY_ChIP_ZNF263_K562_ENCSR749YHO_counts_pattern_1.n_4098-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR845GGY_ChIP_ZNF263_K562_ENCSR749YHO_counts_pattern_2.n_1524-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR845GGY_ChIP_ZNF263_K562_ENCSR749YHO_counts_pattern_3.n_383-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR845GGY_ChIP_ZNF263_K562_ENCSR749YHO_counts_pattern_4.n_300-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR845GGY_ChIP_ZNF263_K562_ENCSR749YHO_counts_pattern_5.n_119-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR845GGY_ChIP_ZNF263_K562_ENCSR749YHO_counts_pattern_6.n_76-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR845GGY_ChIP_ZNF263_K562_ENCSR749YHO_counts_pattern_7.n_48-vs-ZNF263-201.alignment counts-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF264-201/ChipExo_models_ZNF264_counts-pos.pattern_0.n_196-vs-ZNF264-201.alignment counts-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF264-201/ChipExo_models_ZNF264_counts-pos.pattern_1.n_188-vs-ZNF264-201.alignment counts-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF264-201/ChipExo_models_ZNF264_counts-pos.pattern_2.n_84-vs-ZNF264-201.alignment counts-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF264-201/Hughes_GR_models_ZNF264_counts-pos.pattern_0.n_103-vs-ZNF264-201.alignment counts-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF264-201/Hughes_GR_models_ZNF264_counts-pos.pattern_1.n_75-vs-ZNF264-201.alignment counts-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF264-201/Hughes_GR_models_ZNF264_counts-pos.pattern_2.n_42-vs-ZNF264-201.alignment counts-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF264-201/Hughes_GR_models_ZNF264_counts-pos.pattern_3.n_35-vs-ZNF264-201.alignment counts-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF264-201/Hughes_NB_models_ZNF264_counts-pos.pattern_0.n_1735-vs-ZNF264-201.alignment counts-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF264-201/Hughes_NB_models_ZNF264_counts-pos.pattern_1.n_313-vs-ZNF264-201.alignment counts-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF264-201/Hughes_NB_models_ZNF264_counts-pos.pattern_2.n_122-vs-ZNF264-201.alignment counts-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF264-201/pos_patterns.ENCSR248BVU_ChIP_ZNF264_HepG2_ENCSR020DMV_counts_pattern_0.n_4072-vs-ZNF264-201.alignment counts-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF264-201/pos_patterns.ENCSR248BVU_ChIP_ZNF264_HepG2_ENCSR020DMV_counts_pattern_1.n_2766-vs-ZNF264-201.alignment counts-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF264-201/pos_patterns.ENCSR248BVU_ChIP_ZNF264_HepG2_ENCSR020DMV_counts_pattern_2.n_1431-vs-ZNF264-201.alignment counts-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF264-201/pos_patterns.ENCSR248BVU_ChIP_ZNF264_HepG2_ENCSR020DMV_counts_pattern_3.n_920-vs-ZNF264-201.alignment counts-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF264-201/pos_patterns.ENCSR248BVU_ChIP_ZNF264_HepG2_ENCSR020DMV_counts_pattern_4.n_571-vs-ZNF264-201.alignment counts-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF264-201/pos_patterns.ENCSR248BVU_ChIP_ZNF264_HepG2_ENCSR020DMV_counts_pattern_5.n_508-vs-ZNF264-201.alignment counts-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF264-201/pos_patterns.ENCSR248BVU_ChIP_ZNF264_HepG2_ENCSR020DMV_counts_pattern_6.n_308-vs-ZNF264-201.alignment counts-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF264-201/pos_patterns.ENCSR248BVU_ChIP_ZNF264_HepG2_ENCSR020DMV_counts_pattern_7.n_239-vs-ZNF264-201.alignment counts-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF264-201/pos_patterns.ENCSR248BVU_ChIP_ZNF264_HepG2_ENCSR020DMV_counts_pattern_8.n_178-vs-ZNF264-201.alignment counts-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF264-201/pos_patterns.ENCSR248BVU_ChIP_ZNF264_HepG2_ENCSR020DMV_counts_pattern_9.n_161-vs-ZNF264-201.alignment counts-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF266-202/ChipExo_models_ZNF266_counts-pos.pattern_0.n_1319-vs-ZNF266-202.alignment counts-znf_b1h_alignment/ZNF266-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF266-202/pos_patterns.ENCSR466VYP_ChIP_ZNF266_HEK293_ENCSR521XAG_counts_pattern_0.n_3680-vs-ZNF266-202.alignment counts-znf_b1h_alignment/ZNF266-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF266-202/pos_patterns.ENCSR466VYP_ChIP_ZNF266_HEK293_ENCSR521XAG_counts_pattern_1.n_686-vs-ZNF266-202.alignment counts-znf_b1h_alignment/ZNF266-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF266-202/pos_patterns.ENCSR466VYP_ChIP_ZNF266_HEK293_ENCSR521XAG_counts_pattern_2.n_439-vs-ZNF266-202.alignment counts-znf_b1h_alignment/ZNF266-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF266-202/pos_patterns.ENCSR466VYP_ChIP_ZNF266_HEK293_ENCSR521XAG_counts_pattern_3.n_151-vs-ZNF266-202.alignment counts-znf_b1h_alignment/ZNF266-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF266-202/pos_patterns.ENCSR466VYP_ChIP_ZNF266_HEK293_ENCSR521XAG_counts_pattern_4.n_147-vs-ZNF266-202.alignment counts-znf_b1h_alignment/ZNF266-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF266-202/pos_patterns.ENCSR466VYP_ChIP_ZNF266_HEK293_ENCSR521XAG_counts_pattern_5.n_61-vs-ZNF266-202.alignment counts-znf_b1h_alignment/ZNF266-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF266-202/pos_patterns.ENCSR466VYP_ChIP_ZNF266_HEK293_ENCSR521XAG_counts_pattern_6.n_45-vs-ZNF266-202.alignment counts-znf_b1h_alignment/ZNF266-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF267-201/ChipExo_models_ZNF267_counts-pos.pattern_0.n_531-vs-ZNF267-201.alignment counts-znf_b1h_alignment/ZNF267-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF267-201/ChipExo_models_ZNF267_counts-pos.pattern_1.n_209-vs-ZNF267-201.alignment counts-znf_b1h_alignment/ZNF267-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF267-201/ChipExo_models_ZNF267_counts-pos.pattern_2.n_49-vs-ZNF267-201.alignment counts-znf_b1h_alignment/ZNF267-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF267-201/ChipExo_models_ZNF267_counts-pos.pattern_3.n_21-vs-ZNF267-201.alignment counts-znf_b1h_alignment/ZNF267-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF267-206/ChipExo_models_ZNF267_counts-pos.pattern_0.n_531-vs-ZNF267-206.alignment counts-znf_b1h_alignment/ZNF267-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF267-206/ChipExo_models_ZNF267_counts-pos.pattern_1.n_209-vs-ZNF267-206.alignment counts-znf_b1h_alignment/ZNF267-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF267-206/ChipExo_models_ZNF267_counts-pos.pattern_2.n_49-vs-ZNF267-206.alignment counts-znf_b1h_alignment/ZNF267-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF267-206/ChipExo_models_ZNF267_counts-pos.pattern_3.n_21-vs-ZNF267-206.alignment counts-znf_b1h_alignment/ZNF267-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF273-201/ChipExo_models_ZNF273_counts-pos.pattern_0.n_3019-vs-ZNF273-201.alignment counts-znf_b1h_alignment/ZNF273-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF273-201/ChipExo_models_ZNF273_counts-pos.pattern_1.n_1797-vs-ZNF273-201.alignment counts-znf_b1h_alignment/ZNF273-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF273-201/ChipExo_models_ZNF273_counts-pos.pattern_2.n_987-vs-ZNF273-201.alignment counts-znf_b1h_alignment/ZNF273-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF273-201/ChipExo_models_ZNF273_counts-pos.pattern_3.n_372-vs-ZNF273-201.alignment counts-znf_b1h_alignment/ZNF273-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF273-201/ChipExo_models_ZNF273_counts-pos.pattern_4.n_94-vs-ZNF273-201.alignment counts-znf_b1h_alignment/ZNF273-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF273-201/ChipExo_models_ZNF273_counts-pos.pattern_5.n_66-vs-ZNF273-201.alignment counts-znf_b1h_alignment/ZNF273-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF273-201/Hughes_NB_models_ZNF273_counts-pos.pattern_0.n_188-vs-ZNF273-201.alignment counts-znf_b1h_alignment/ZNF273-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF273-201/Hughes_NB_models_ZNF273_counts-pos.pattern_1.n_152-vs-ZNF273-201.alignment counts-znf_b1h_alignment/ZNF273-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF273-201/Hughes_NB_models_ZNF273_counts-pos.pattern_2.n_86-vs-ZNF273-201.alignment counts-znf_b1h_alignment/ZNF273-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/ChipExo_models_ZNF274_counts-pos.pattern_0.n_1053-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/neg_patterns.ENCSR871VNN_ChIP_ZNF274_HepG2_ENCSR449NSD_counts_pattern_0.n_181-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/neg_patterns.ENCSR871VNN_ChIP_ZNF274_HepG2_ENCSR449NSD_counts_pattern_1.n_54-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/neg_patterns.ENCSR871VNN_ChIP_ZNF274_HepG2_ENCSR449NSD_counts_pattern_2.n_26-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EUI_ChIP_ZNF274_GM08714_ENCSR982WSU_counts_pattern_0.n_475-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EUI_ChIP_ZNF274_GM08714_ENCSR982WSU_counts_pattern_1.n_471-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EUI_ChIP_ZNF274_GM08714_ENCSR982WSU_counts_pattern_2.n_98-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EUK_ChIP_ZNF274_GM12878_ENCSR822JGM_counts_pattern_0.n_253-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EUK_ChIP_ZNF274_GM12878_ENCSR822JGM_counts_pattern_1.n_132-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EUK_ChIP_ZNF274_GM12878_ENCSR822JGM_counts_pattern_2.n_115-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EUN_ChIP_ZNF274_H1_ENCSR912JCS_counts_pattern_0.n_811-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EUN_ChIP_ZNF274_H1_ENCSR912JCS_counts_pattern_1.n_685-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EVG_ChIP_ZNF274_HeLa-S3_ENCSR280NEV_counts_pattern_0.n_298-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EVG_ChIP_ZNF274_HeLa-S3_ENCSR280NEV_counts_pattern_1.n_173-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EVR_ChIP_ZNF274_HepG2_ENCSR275IXE_counts_pattern_0.n_551-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EVX_ChIP_ZNF274_K562_ENCSR253FIG_counts_pattern_0.n_1426-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EVX_ChIP_ZNF274_K562_ENCSR253FIG_counts_pattern_1.n_329-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EVX_ChIP_ZNF274_K562_ENCSR253FIG_counts_pattern_2.n_38-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EVX_ChIP_ZNF274_K562_ENCSR253FIG_counts_pattern_3.n_29-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EWE_ChIP_ZNF274_K562_ENCSR045QEV_counts_pattern_0.n_256-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EWE_ChIP_ZNF274_K562_ENCSR045QEV_counts_pattern_1.n_253-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EWE_ChIP_ZNF274_K562_ENCSR045QEV_counts_pattern_2.n_20-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EWY_ChIP_ZNF274_NT2_D1_ENCSR821NQF_counts_pattern_0.n_955-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EWY_ChIP_ZNF274_NT2_D1_ENCSR821NQF_counts_pattern_1.n_632-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EWY_ChIP_ZNF274_NT2_D1_ENCSR821NQF_counts_pattern_2.n_34-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000FCI_ChIP_ZNF274_HEK293_ENCSR469PPH_counts_pattern_0.n_274-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000FCI_ChIP_ZNF274_HEK293_ENCSR469PPH_counts_pattern_1.n_207-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR101FJM_ChIP_ZNF274_HCT116_ENCSR079PXR_counts_pattern_0.n_390-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR101FJM_ChIP_ZNF274_HCT116_ENCSR079PXR_counts_pattern_1.n_340-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR101FJM_ChIP_ZNF274_HCT116_ENCSR079PXR_counts_pattern_2.n_42-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR178QVJ_ChIP_ZNF274_HEK293_ENCSR804PIO_counts_pattern_0.n_1525-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR871VNN_ChIP_ZNF274_HepG2_ENCSR449NSD_counts_pattern_0.n_1831-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR871VNN_ChIP_ZNF274_HepG2_ENCSR449NSD_counts_pattern_10.n_366-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR871VNN_ChIP_ZNF274_HepG2_ENCSR449NSD_counts_pattern_11.n_353-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR871VNN_ChIP_ZNF274_HepG2_ENCSR449NSD_counts_pattern_12.n_300-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR871VNN_ChIP_ZNF274_HepG2_ENCSR449NSD_counts_pattern_13.n_239-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR871VNN_ChIP_ZNF274_HepG2_ENCSR449NSD_counts_pattern_14.n_226-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR871VNN_ChIP_ZNF274_HepG2_ENCSR449NSD_counts_pattern_15.n_185-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR871VNN_ChIP_ZNF274_HepG2_ENCSR449NSD_counts_pattern_16.n_164-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR871VNN_ChIP_ZNF274_HepG2_ENCSR449NSD_counts_pattern_17.n_98-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR871VNN_ChIP_ZNF274_HepG2_ENCSR449NSD_counts_pattern_18.n_66-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR871VNN_ChIP_ZNF274_HepG2_ENCSR449NSD_counts_pattern_19.n_46-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR871VNN_ChIP_ZNF274_HepG2_ENCSR449NSD_counts_pattern_1.n_1769-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR871VNN_ChIP_ZNF274_HepG2_ENCSR449NSD_counts_pattern_20.n_30-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR871VNN_ChIP_ZNF274_HepG2_ENCSR449NSD_counts_pattern_21.n_26-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR871VNN_ChIP_ZNF274_HepG2_ENCSR449NSD_counts_pattern_22.n_20-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR871VNN_ChIP_ZNF274_HepG2_ENCSR449NSD_counts_pattern_2.n_1655-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR871VNN_ChIP_ZNF274_HepG2_ENCSR449NSD_counts_pattern_3.n_1277-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR871VNN_ChIP_ZNF274_HepG2_ENCSR449NSD_counts_pattern_4.n_1275-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR871VNN_ChIP_ZNF274_HepG2_ENCSR449NSD_counts_pattern_5.n_871-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR871VNN_ChIP_ZNF274_HepG2_ENCSR449NSD_counts_pattern_6.n_709-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR871VNN_ChIP_ZNF274_HepG2_ENCSR449NSD_counts_pattern_7.n_538-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR871VNN_ChIP_ZNF274_HepG2_ENCSR449NSD_counts_pattern_8.n_485-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR871VNN_ChIP_ZNF274_HepG2_ENCSR449NSD_counts_pattern_9.n_417-vs-ZNF274-201.alignment counts-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-201/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_0.n_1467-vs-ZNF275-201.alignment counts-znf_b1h_alignment/ZNF275-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-201/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_10.n_263-vs-ZNF275-201.alignment counts-znf_b1h_alignment/ZNF275-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-201/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_11.n_240-vs-ZNF275-201.alignment counts-znf_b1h_alignment/ZNF275-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-201/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_12.n_236-vs-ZNF275-201.alignment counts-znf_b1h_alignment/ZNF275-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-201/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_13.n_219-vs-ZNF275-201.alignment counts-znf_b1h_alignment/ZNF275-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-201/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_14.n_191-vs-ZNF275-201.alignment counts-znf_b1h_alignment/ZNF275-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-201/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_15.n_190-vs-ZNF275-201.alignment counts-znf_b1h_alignment/ZNF275-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-201/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_17.n_166-vs-ZNF275-201.alignment counts-znf_b1h_alignment/ZNF275-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-201/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_18.n_152-vs-ZNF275-201.alignment counts-znf_b1h_alignment/ZNF275-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-201/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_19.n_101-vs-ZNF275-201.alignment counts-znf_b1h_alignment/ZNF275-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-201/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_1.n_1278-vs-ZNF275-201.alignment counts-znf_b1h_alignment/ZNF275-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-201/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_20.n_92-vs-ZNF275-201.alignment counts-znf_b1h_alignment/ZNF275-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-201/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_21.n_54-vs-ZNF275-201.alignment counts-znf_b1h_alignment/ZNF275-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-201/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_22.n_24-vs-ZNF275-201.alignment counts-znf_b1h_alignment/ZNF275-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-201/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_2.n_1068-vs-ZNF275-201.alignment counts-znf_b1h_alignment/ZNF275-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-201/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_3.n_847-vs-ZNF275-201.alignment counts-znf_b1h_alignment/ZNF275-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-201/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_4.n_766-vs-ZNF275-201.alignment counts-znf_b1h_alignment/ZNF275-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-201/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_5.n_625-vs-ZNF275-201.alignment counts-znf_b1h_alignment/ZNF275-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-201/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_6.n_590-vs-ZNF275-201.alignment counts-znf_b1h_alignment/ZNF275-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-201/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_7.n_508-vs-ZNF275-201.alignment counts-znf_b1h_alignment/ZNF275-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-201/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_8.n_286-vs-ZNF275-201.alignment counts-znf_b1h_alignment/ZNF275-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-201/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_9.n_269-vs-ZNF275-201.alignment counts-znf_b1h_alignment/ZNF275-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-202/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_0.n_1467-vs-ZNF275-202.alignment counts-znf_b1h_alignment/ZNF275-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-202/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_10.n_263-vs-ZNF275-202.alignment counts-znf_b1h_alignment/ZNF275-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-202/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_11.n_240-vs-ZNF275-202.alignment counts-znf_b1h_alignment/ZNF275-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-202/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_12.n_236-vs-ZNF275-202.alignment counts-znf_b1h_alignment/ZNF275-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-202/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_13.n_219-vs-ZNF275-202.alignment counts-znf_b1h_alignment/ZNF275-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-202/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_14.n_191-vs-ZNF275-202.alignment counts-znf_b1h_alignment/ZNF275-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-202/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_15.n_190-vs-ZNF275-202.alignment counts-znf_b1h_alignment/ZNF275-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-202/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_16.n_167-vs-ZNF275-202.alignment counts-znf_b1h_alignment/ZNF275-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-202/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_17.n_166-vs-ZNF275-202.alignment counts-znf_b1h_alignment/ZNF275-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-202/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_18.n_152-vs-ZNF275-202.alignment counts-znf_b1h_alignment/ZNF275-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-202/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_19.n_101-vs-ZNF275-202.alignment counts-znf_b1h_alignment/ZNF275-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-202/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_1.n_1278-vs-ZNF275-202.alignment counts-znf_b1h_alignment/ZNF275-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-202/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_20.n_92-vs-ZNF275-202.alignment counts-znf_b1h_alignment/ZNF275-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-202/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_21.n_54-vs-ZNF275-202.alignment counts-znf_b1h_alignment/ZNF275-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-202/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_22.n_24-vs-ZNF275-202.alignment counts-znf_b1h_alignment/ZNF275-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-202/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_2.n_1068-vs-ZNF275-202.alignment counts-znf_b1h_alignment/ZNF275-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-202/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_3.n_847-vs-ZNF275-202.alignment counts-znf_b1h_alignment/ZNF275-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-202/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_4.n_766-vs-ZNF275-202.alignment counts-znf_b1h_alignment/ZNF275-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-202/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_5.n_625-vs-ZNF275-202.alignment counts-znf_b1h_alignment/ZNF275-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-202/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_6.n_590-vs-ZNF275-202.alignment counts-znf_b1h_alignment/ZNF275-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-202/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_7.n_508-vs-ZNF275-202.alignment counts-znf_b1h_alignment/ZNF275-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-202/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_8.n_286-vs-ZNF275-202.alignment counts-znf_b1h_alignment/ZNF275-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF275-202/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_counts_pattern_9.n_269-vs-ZNF275-202.alignment counts-znf_b1h_alignment/ZNF275-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-201/neg_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_0.n_123-vs-ZNF276-201.alignment counts-znf_b1h_alignment/ZNF276-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-201/neg_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_1.n_32-vs-ZNF276-201.alignment counts-znf_b1h_alignment/ZNF276-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-201/neg_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_2.n_30-vs-ZNF276-201.alignment counts-znf_b1h_alignment/ZNF276-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-201/neg_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_3.n_28-vs-ZNF276-201.alignment counts-znf_b1h_alignment/ZNF276-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-201/neg_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_4.n_28-vs-ZNF276-201.alignment counts-znf_b1h_alignment/ZNF276-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-201/neg_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_5.n_27-vs-ZNF276-201.alignment counts-znf_b1h_alignment/ZNF276-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-201/neg_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_6.n_27-vs-ZNF276-201.alignment counts-znf_b1h_alignment/ZNF276-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-201/neg_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_7.n_22-vs-ZNF276-201.alignment counts-znf_b1h_alignment/ZNF276-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-201/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_0.n_5417-vs-ZNF276-201.alignment counts-znf_b1h_alignment/ZNF276-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-201/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_10.n_125-vs-ZNF276-201.alignment counts-znf_b1h_alignment/ZNF276-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-201/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_11.n_121-vs-ZNF276-201.alignment counts-znf_b1h_alignment/ZNF276-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-201/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_12.n_84-vs-ZNF276-201.alignment counts-znf_b1h_alignment/ZNF276-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-201/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_13.n_66-vs-ZNF276-201.alignment counts-znf_b1h_alignment/ZNF276-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-201/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_1.n_1220-vs-ZNF276-201.alignment counts-znf_b1h_alignment/ZNF276-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-201/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_2.n_512-vs-ZNF276-201.alignment counts-znf_b1h_alignment/ZNF276-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-201/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_3.n_456-vs-ZNF276-201.alignment counts-znf_b1h_alignment/ZNF276-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-201/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_4.n_432-vs-ZNF276-201.alignment counts-znf_b1h_alignment/ZNF276-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-201/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_5.n_406-vs-ZNF276-201.alignment counts-znf_b1h_alignment/ZNF276-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-201/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_6.n_372-vs-ZNF276-201.alignment counts-znf_b1h_alignment/ZNF276-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-201/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_7.n_157-vs-ZNF276-201.alignment counts-znf_b1h_alignment/ZNF276-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-201/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_8.n_141-vs-ZNF276-201.alignment counts-znf_b1h_alignment/ZNF276-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-201/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_9.n_132-vs-ZNF276-201.alignment counts-znf_b1h_alignment/ZNF276-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-204/neg_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_0.n_123-vs-ZNF276-204.alignment counts-znf_b1h_alignment/ZNF276-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-204/neg_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_1.n_32-vs-ZNF276-204.alignment counts-znf_b1h_alignment/ZNF276-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-204/neg_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_2.n_30-vs-ZNF276-204.alignment counts-znf_b1h_alignment/ZNF276-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-204/neg_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_3.n_28-vs-ZNF276-204.alignment counts-znf_b1h_alignment/ZNF276-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-204/neg_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_4.n_28-vs-ZNF276-204.alignment counts-znf_b1h_alignment/ZNF276-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-204/neg_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_5.n_27-vs-ZNF276-204.alignment counts-znf_b1h_alignment/ZNF276-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-204/neg_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_6.n_27-vs-ZNF276-204.alignment counts-znf_b1h_alignment/ZNF276-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-204/neg_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_7.n_22-vs-ZNF276-204.alignment counts-znf_b1h_alignment/ZNF276-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-204/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_0.n_5417-vs-ZNF276-204.alignment counts-znf_b1h_alignment/ZNF276-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-204/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_10.n_125-vs-ZNF276-204.alignment counts-znf_b1h_alignment/ZNF276-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-204/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_11.n_121-vs-ZNF276-204.alignment counts-znf_b1h_alignment/ZNF276-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-204/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_12.n_84-vs-ZNF276-204.alignment counts-znf_b1h_alignment/ZNF276-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-204/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_13.n_66-vs-ZNF276-204.alignment counts-znf_b1h_alignment/ZNF276-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-204/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_1.n_1220-vs-ZNF276-204.alignment counts-znf_b1h_alignment/ZNF276-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-204/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_2.n_512-vs-ZNF276-204.alignment counts-znf_b1h_alignment/ZNF276-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-204/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_3.n_456-vs-ZNF276-204.alignment counts-znf_b1h_alignment/ZNF276-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-204/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_4.n_432-vs-ZNF276-204.alignment counts-znf_b1h_alignment/ZNF276-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-204/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_5.n_406-vs-ZNF276-204.alignment counts-znf_b1h_alignment/ZNF276-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-204/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_6.n_372-vs-ZNF276-204.alignment counts-znf_b1h_alignment/ZNF276-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-204/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_7.n_157-vs-ZNF276-204.alignment counts-znf_b1h_alignment/ZNF276-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-204/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_8.n_141-vs-ZNF276-204.alignment counts-znf_b1h_alignment/ZNF276-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-204/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_9.n_132-vs-ZNF276-204.alignment counts-znf_b1h_alignment/ZNF276-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-206/neg_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_0.n_123-vs-ZNF276-206.alignment counts-znf_b1h_alignment/ZNF276-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-206/neg_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_1.n_32-vs-ZNF276-206.alignment counts-znf_b1h_alignment/ZNF276-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-206/neg_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_2.n_30-vs-ZNF276-206.alignment counts-znf_b1h_alignment/ZNF276-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-206/neg_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_3.n_28-vs-ZNF276-206.alignment counts-znf_b1h_alignment/ZNF276-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-206/neg_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_4.n_28-vs-ZNF276-206.alignment counts-znf_b1h_alignment/ZNF276-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-206/neg_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_5.n_27-vs-ZNF276-206.alignment counts-znf_b1h_alignment/ZNF276-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-206/neg_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_6.n_27-vs-ZNF276-206.alignment counts-znf_b1h_alignment/ZNF276-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-206/neg_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_7.n_22-vs-ZNF276-206.alignment counts-znf_b1h_alignment/ZNF276-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-206/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_0.n_5417-vs-ZNF276-206.alignment counts-znf_b1h_alignment/ZNF276-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-206/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_10.n_125-vs-ZNF276-206.alignment counts-znf_b1h_alignment/ZNF276-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-206/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_11.n_121-vs-ZNF276-206.alignment counts-znf_b1h_alignment/ZNF276-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-206/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_12.n_84-vs-ZNF276-206.alignment counts-znf_b1h_alignment/ZNF276-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-206/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_13.n_66-vs-ZNF276-206.alignment counts-znf_b1h_alignment/ZNF276-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-206/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_1.n_1220-vs-ZNF276-206.alignment counts-znf_b1h_alignment/ZNF276-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-206/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_2.n_512-vs-ZNF276-206.alignment counts-znf_b1h_alignment/ZNF276-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-206/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_3.n_456-vs-ZNF276-206.alignment counts-znf_b1h_alignment/ZNF276-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-206/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_4.n_432-vs-ZNF276-206.alignment counts-znf_b1h_alignment/ZNF276-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-206/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_5.n_406-vs-ZNF276-206.alignment counts-znf_b1h_alignment/ZNF276-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-206/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_6.n_372-vs-ZNF276-206.alignment counts-znf_b1h_alignment/ZNF276-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-206/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_7.n_157-vs-ZNF276-206.alignment counts-znf_b1h_alignment/ZNF276-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-206/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_8.n_141-vs-ZNF276-206.alignment counts-znf_b1h_alignment/ZNF276-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF276-206/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_counts_pattern_9.n_132-vs-ZNF276-206.alignment counts-znf_b1h_alignment/ZNF276-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF277-201/pos_patterns.ENCSR358PJI_ChIP_ZNF277_K562_ENCSR912JZA_counts_pattern_0.n_1232-vs-ZNF277-201.alignment counts-znf_b1h_alignment/ZNF277-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF277-201/pos_patterns.ENCSR358PJI_ChIP_ZNF277_K562_ENCSR912JZA_counts_pattern_1.n_95-vs-ZNF277-201.alignment counts-znf_b1h_alignment/ZNF277-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF277-201/pos_patterns.ENCSR358PJI_ChIP_ZNF277_K562_ENCSR912JZA_counts_pattern_2.n_70-vs-ZNF277-201.alignment counts-znf_b1h_alignment/ZNF277-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF277-201/pos_patterns.ENCSR358PJI_ChIP_ZNF277_K562_ENCSR912JZA_counts_pattern_3.n_55-vs-ZNF277-201.alignment counts-znf_b1h_alignment/ZNF277-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF277-201/pos_patterns.ENCSR358PJI_ChIP_ZNF277_K562_ENCSR912JZA_counts_pattern_4.n_51-vs-ZNF277-201.alignment counts-znf_b1h_alignment/ZNF277-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF277-201/pos_patterns.ENCSR358PJI_ChIP_ZNF277_K562_ENCSR912JZA_counts_pattern_5.n_33-vs-ZNF277-201.alignment counts-znf_b1h_alignment/ZNF277-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF277-202/pos_patterns.ENCSR358PJI_ChIP_ZNF277_K562_ENCSR912JZA_counts_pattern_0.n_1232-vs-ZNF277-202.alignment counts-znf_b1h_alignment/ZNF277-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF277-202/pos_patterns.ENCSR358PJI_ChIP_ZNF277_K562_ENCSR912JZA_counts_pattern_1.n_95-vs-ZNF277-202.alignment counts-znf_b1h_alignment/ZNF277-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF277-202/pos_patterns.ENCSR358PJI_ChIP_ZNF277_K562_ENCSR912JZA_counts_pattern_2.n_70-vs-ZNF277-202.alignment counts-znf_b1h_alignment/ZNF277-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF277-202/pos_patterns.ENCSR358PJI_ChIP_ZNF277_K562_ENCSR912JZA_counts_pattern_3.n_55-vs-ZNF277-202.alignment counts-znf_b1h_alignment/ZNF277-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF277-202/pos_patterns.ENCSR358PJI_ChIP_ZNF277_K562_ENCSR912JZA_counts_pattern_4.n_51-vs-ZNF277-202.alignment counts-znf_b1h_alignment/ZNF277-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF277-202/pos_patterns.ENCSR358PJI_ChIP_ZNF277_K562_ENCSR912JZA_counts_pattern_5.n_33-vs-ZNF277-202.alignment counts-znf_b1h_alignment/ZNF277-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF277-206/pos_patterns.ENCSR358PJI_ChIP_ZNF277_K562_ENCSR912JZA_counts_pattern_0.n_1232-vs-ZNF277-206.alignment counts-znf_b1h_alignment/ZNF277-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF277-206/pos_patterns.ENCSR358PJI_ChIP_ZNF277_K562_ENCSR912JZA_counts_pattern_1.n_95-vs-ZNF277-206.alignment counts-znf_b1h_alignment/ZNF277-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF277-206/pos_patterns.ENCSR358PJI_ChIP_ZNF277_K562_ENCSR912JZA_counts_pattern_2.n_70-vs-ZNF277-206.alignment counts-znf_b1h_alignment/ZNF277-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF277-206/pos_patterns.ENCSR358PJI_ChIP_ZNF277_K562_ENCSR912JZA_counts_pattern_3.n_55-vs-ZNF277-206.alignment counts-znf_b1h_alignment/ZNF277-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF277-206/pos_patterns.ENCSR358PJI_ChIP_ZNF277_K562_ENCSR912JZA_counts_pattern_4.n_51-vs-ZNF277-206.alignment counts-znf_b1h_alignment/ZNF277-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF277-206/pos_patterns.ENCSR358PJI_ChIP_ZNF277_K562_ENCSR912JZA_counts_pattern_5.n_33-vs-ZNF277-206.alignment counts-znf_b1h_alignment/ZNF277-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF280A-201/Hughes_GR_models_ZNF280A_counts-pos.pattern_0.n_636-vs-ZNF280A-201.alignment counts-znf_b1h_alignment/ZNF280A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF280A-201/Hughes_GR_models_ZNF280A_counts-pos.pattern_10.n_94-vs-ZNF280A-201.alignment counts-znf_b1h_alignment/ZNF280A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF280A-201/Hughes_GR_models_ZNF280A_counts-pos.pattern_11.n_94-vs-ZNF280A-201.alignment counts-znf_b1h_alignment/ZNF280A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF280A-201/Hughes_GR_models_ZNF280A_counts-pos.pattern_12.n_76-vs-ZNF280A-201.alignment counts-znf_b1h_alignment/ZNF280A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF280A-201/Hughes_GR_models_ZNF280A_counts-pos.pattern_13.n_76-vs-ZNF280A-201.alignment counts-znf_b1h_alignment/ZNF280A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF280A-201/Hughes_GR_models_ZNF280A_counts-pos.pattern_14.n_75-vs-ZNF280A-201.alignment counts-znf_b1h_alignment/ZNF280A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF280A-201/Hughes_GR_models_ZNF280A_counts-pos.pattern_15.n_67-vs-ZNF280A-201.alignment counts-znf_b1h_alignment/ZNF280A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF280A-201/Hughes_GR_models_ZNF280A_counts-pos.pattern_16.n_63-vs-ZNF280A-201.alignment counts-znf_b1h_alignment/ZNF280A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF280A-201/Hughes_GR_models_ZNF280A_counts-pos.pattern_17.n_63-vs-ZNF280A-201.alignment counts-znf_b1h_alignment/ZNF280A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF280A-201/Hughes_GR_models_ZNF280A_counts-pos.pattern_18.n_60-vs-ZNF280A-201.alignment counts-znf_b1h_alignment/ZNF280A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF280A-201/Hughes_GR_models_ZNF280A_counts-pos.pattern_19.n_53-vs-ZNF280A-201.alignment counts-znf_b1h_alignment/ZNF280A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF280A-201/Hughes_GR_models_ZNF280A_counts-pos.pattern_1.n_380-vs-ZNF280A-201.alignment counts-znf_b1h_alignment/ZNF280A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF280A-201/Hughes_GR_models_ZNF280A_counts-pos.pattern_20.n_50-vs-ZNF280A-201.alignment counts-znf_b1h_alignment/ZNF280A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF280A-201/Hughes_GR_models_ZNF280A_counts-pos.pattern_21.n_42-vs-ZNF280A-201.alignment counts-znf_b1h_alignment/ZNF280A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF280A-201/Hughes_GR_models_ZNF280A_counts-pos.pattern_22.n_41-vs-ZNF280A-201.alignment counts-znf_b1h_alignment/ZNF280A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF280A-201/Hughes_GR_models_ZNF280A_counts-pos.pattern_23.n_40-vs-ZNF280A-201.alignment counts-znf_b1h_alignment/ZNF280A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF280A-201/Hughes_GR_models_ZNF280A_counts-pos.pattern_24.n_36-vs-ZNF280A-201.alignment counts-znf_b1h_alignment/ZNF280A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF280A-201/Hughes_GR_models_ZNF280A_counts-pos.pattern_25.n_33-vs-ZNF280A-201.alignment counts-znf_b1h_alignment/ZNF280A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF280A-201/Hughes_GR_models_ZNF280A_counts-pos.pattern_26.n_30-vs-ZNF280A-201.alignment counts-znf_b1h_alignment/ZNF280A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF280A-201/Hughes_GR_models_ZNF280A_counts-pos.pattern_27.n_29-vs-ZNF280A-201.alignment counts-znf_b1h_alignment/ZNF280A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF280A-201/Hughes_GR_models_ZNF280A_counts-pos.pattern_28.n_28-vs-ZNF280A-201.alignment counts-znf_b1h_alignment/ZNF280A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF280A-201/Hughes_GR_models_ZNF280A_counts-pos.pattern_29.n_21-vs-ZNF280A-201.alignment counts-znf_b1h_alignment/ZNF280A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF280A-201/Hughes_GR_models_ZNF280A_counts-pos.pattern_2.n_209-vs-ZNF280A-201.alignment counts-znf_b1h_alignment/ZNF280A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF280A-201/Hughes_GR_models_ZNF280A_counts-pos.pattern_30.n_20-vs-ZNF280A-201.alignment counts-znf_b1h_alignment/ZNF280A-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF280A-201/Hughes_GR_models_ZNF280A_counts-pos.pattern_4.n_137-vs-ZNF280A-201.alignment counts-znf_b1h_alignment/ZNF280A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF280A-201/Hughes_GR_models_ZNF280A_counts-pos.pattern_5.n_128-vs-ZNF280A-201.alignment counts-znf_b1h_alignment/ZNF280A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF280A-201/Hughes_GR_models_ZNF280A_counts-pos.pattern_6.n_114-vs-ZNF280A-201.alignment counts-znf_b1h_alignment/ZNF280A-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF280D-201/pos_patterns.ENCSR233FJO_ChIP_ZNF280D_HepG2_ENCSR813QRF_counts_pattern_21.n_46-vs-ZNF280D-201.alignment counts-znf_b1h_alignment/ZNF280D-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF280D-201/pos_patterns.ENCSR233FJO_ChIP_ZNF280D_HepG2_ENCSR813QRF_counts_pattern_22.n_28-vs-ZNF280D-201.alignment counts-znf_b1h_alignment/ZNF280D-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF280D-201/pos_patterns.ENCSR233FJO_ChIP_ZNF280D_HepG2_ENCSR813QRF_counts_pattern_23.n_22-vs-ZNF280D-201.alignment counts-znf_b1h_alignment/ZNF280D-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF280D-201/pos_patterns.ENCSR233FJO_ChIP_ZNF280D_HepG2_ENCSR813QRF_counts_pattern_2.n_1509-vs-ZNF280D-201.alignment counts-znf_b1h_alignment/ZNF280D-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR403MJY_ChIP_ZNF281_HepG2_ENCSR712WOB_counts_pattern_6.n_340-vs-ZNF281-201.alignment counts-znf_b1h_alignment/ZNF281-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR403MJY_ChIP_ZNF281_HepG2_ENCSR712WOB_counts_pattern_7.n_157-vs-ZNF281-201.alignment counts-znf_b1h_alignment/ZNF281-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR403MJY_ChIP_ZNF281_HepG2_ENCSR712WOB_counts_pattern_8.n_87-vs-ZNF281-201.alignment counts-znf_b1h_alignment/ZNF281-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR403MJY_ChIP_ZNF281_HepG2_ENCSR712WOB_counts_pattern_9.n_52-vs-ZNF281-201.alignment counts-znf_b1h_alignment/ZNF281-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF28-203/ChipExo_models_ZNF28_counts-pos.pattern_0.n_6474-vs-ZNF28-203.alignment counts-znf_b1h_alignment/ZNF28-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF28-203/ChipExo_models_ZNF28_counts-pos.pattern_1.n_4374-vs-ZNF28-203.alignment counts-znf_b1h_alignment/ZNF28-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF28-203/ChipExo_models_ZNF28_counts-pos.pattern_2.n_323-vs-ZNF28-203.alignment counts-znf_b1h_alignment/ZNF28-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF28-203/ChipExo_models_ZNF28_counts-pos.pattern_3.n_239-vs-ZNF28-203.alignment counts-znf_b1h_alignment/ZNF28-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF28-203/ChipExo_models_ZNF28_counts-pos.pattern_4.n_108-vs-ZNF28-203.alignment counts-znf_b1h_alignment/ZNF28-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF28-203/ChipExo_models_ZNF28_counts-pos.pattern_5.n_100-vs-ZNF28-203.alignment counts-znf_b1h_alignment/ZNF28-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF28-203/ChipExo_models_ZNF28_counts-pos.pattern_6.n_62-vs-ZNF28-203.alignment counts-znf_b1h_alignment/ZNF28-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF28-203/ChipExo_models_ZNF28_counts-pos.pattern_7.n_20-vs-ZNF28-203.alignment counts-znf_b1h_alignment/ZNF28-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF28-203/ChipExo_models_ZNF28_counts-pos.pattern_8.n_20-vs-ZNF28-203.alignment counts-znf_b1h_alignment/ZNF28-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF282-204/ChipExo_models_ZNF282_counts-pos.pattern_0.n_6744-vs-ZNF282-204.alignment counts-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF282-204/ChipExo_models_ZNF282_counts-pos.pattern_1.n_358-vs-ZNF282-204.alignment counts-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF282-204/ChipExo_models_ZNF282_counts-pos.pattern_2.n_204-vs-ZNF282-204.alignment counts-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF282-204/ChipExo_models_ZNF282_counts-pos.pattern_3.n_49-vs-ZNF282-204.alignment counts-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF282-204/pos_patterns.ENCSR229KXQ_ChIP_ZNF282_K562_ENCSR536ZAW_counts_pattern_0.n_1066-vs-ZNF282-204.alignment counts-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF282-204/pos_patterns.ENCSR229KXQ_ChIP_ZNF282_K562_ENCSR536ZAW_counts_pattern_1.n_963-vs-ZNF282-204.alignment counts-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF282-204/pos_patterns.ENCSR229KXQ_ChIP_ZNF282_K562_ENCSR536ZAW_counts_pattern_2.n_904-vs-ZNF282-204.alignment counts-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF282-204/pos_patterns.ENCSR229KXQ_ChIP_ZNF282_K562_ENCSR536ZAW_counts_pattern_3.n_97-vs-ZNF282-204.alignment counts-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF282-204/pos_patterns.ENCSR229KXQ_ChIP_ZNF282_K562_ENCSR536ZAW_counts_pattern_4.n_89-vs-ZNF282-204.alignment counts-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF282-204/pos_patterns.ENCSR229KXQ_ChIP_ZNF282_K562_ENCSR536ZAW_counts_pattern_5.n_83-vs-ZNF282-204.alignment counts-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF282-204/pos_patterns.ENCSR229KXQ_ChIP_ZNF282_K562_ENCSR536ZAW_counts_pattern_6.n_68-vs-ZNF282-204.alignment counts-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF282-204/pos_patterns.ENCSR229KXQ_ChIP_ZNF282_K562_ENCSR536ZAW_counts_pattern_7.n_37-vs-ZNF282-204.alignment counts-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF282-204/pos_patterns.ENCSR742TMU_ChIP_ZNF282_K562_ENCSR610PAH_counts_pattern_0.n_4385-vs-ZNF282-204.alignment counts-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF282-204/pos_patterns.ENCSR742TMU_ChIP_ZNF282_K562_ENCSR610PAH_counts_pattern_1.n_4013-vs-ZNF282-204.alignment counts-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF282-204/pos_patterns.ENCSR742TMU_ChIP_ZNF282_K562_ENCSR610PAH_counts_pattern_2.n_535-vs-ZNF282-204.alignment counts-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF282-204/pos_patterns.ENCSR742TMU_ChIP_ZNF282_K562_ENCSR610PAH_counts_pattern_3.n_327-vs-ZNF282-204.alignment counts-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF282-204/pos_patterns.ENCSR742TMU_ChIP_ZNF282_K562_ENCSR610PAH_counts_pattern_4.n_59-vs-ZNF282-204.alignment counts-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF282-204/pos_patterns.ENCSR742TMU_ChIP_ZNF282_K562_ENCSR610PAH_counts_pattern_5.n_49-vs-ZNF282-204.alignment counts-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF282-204/pos_patterns.ENCSR742TMU_ChIP_ZNF282_K562_ENCSR610PAH_counts_pattern_6.n_23-vs-ZNF282-204.alignment counts-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF282-204/pos_patterns.ENCSR752NDX_ChIP_ZNF282_HepG2_ENCSR188GNN_counts_pattern_0.n_477-vs-ZNF282-204.alignment counts-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF282-204/pos_patterns.ENCSR752NDX_ChIP_ZNF282_HepG2_ENCSR188GNN_counts_pattern_1.n_197-vs-ZNF282-204.alignment counts-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF282-204/pos_patterns.ENCSR752NDX_ChIP_ZNF282_HepG2_ENCSR188GNN_counts_pattern_2.n_114-vs-ZNF282-204.alignment counts-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF282-204/pos_patterns.ENCSR752NDX_ChIP_ZNF282_HepG2_ENCSR188GNN_counts_pattern_3.n_111-vs-ZNF282-204.alignment counts-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF282-204/pos_patterns.ENCSR752NDX_ChIP_ZNF282_HepG2_ENCSR188GNN_counts_pattern_4.n_102-vs-ZNF282-204.alignment counts-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF282-204/pos_patterns.ENCSR752NDX_ChIP_ZNF282_HepG2_ENCSR188GNN_counts_pattern_5.n_97-vs-ZNF282-204.alignment counts-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF282-204/pos_patterns.ENCSR752NDX_ChIP_ZNF282_HepG2_ENCSR188GNN_counts_pattern_6.n_51-vs-ZNF282-204.alignment counts-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF283-201/ChipExo_models_ZNF283_counts-pos.pattern_0.n_1655-vs-ZNF283-201.alignment counts-znf_b1h_alignment/ZNF283-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF283-201/ChipExo_models_ZNF283_counts-pos.pattern_1.n_333-vs-ZNF283-201.alignment counts-znf_b1h_alignment/ZNF283-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF283-201/ChipExo_models_ZNF283_counts-pos.pattern_2.n_297-vs-ZNF283-201.alignment counts-znf_b1h_alignment/ZNF283-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF283-201/ChipExo_models_ZNF283_counts-pos.pattern_3.n_132-vs-ZNF283-201.alignment counts-znf_b1h_alignment/ZNF283-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF283-201/ChipExo_models_ZNF283_counts-pos.pattern_4.n_27-vs-ZNF283-201.alignment counts-znf_b1h_alignment/ZNF283-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF284-201/ChipExo_models_ZNF284_counts-pos.pattern_0.n_3928-vs-ZNF284-201.alignment counts-znf_b1h_alignment/ZNF284-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF284-201/ChipExo_models_ZNF284_counts-pos.pattern_1.n_109-vs-ZNF284-201.alignment counts-znf_b1h_alignment/ZNF284-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF287-201/ChipExo_models_ZNF287_counts-pos.pattern_0.n_511-vs-ZNF287-201.alignment counts-znf_b1h_alignment/ZNF287-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF292-201/pos_patterns.ENCSR228PGT_ChIP_ZNF292_HEK293_ENCSR861EFS_counts_pattern_0.n_1828-vs-ZNF292-201.alignment counts-znf_b1h_alignment/ZNF292-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF292-201/pos_patterns.ENCSR228PGT_ChIP_ZNF292_HEK293_ENCSR861EFS_counts_pattern_1.n_27-vs-ZNF292-201.alignment counts-znf_b1h_alignment/ZNF292-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF292-201/pos_patterns.ENCSR853BYT_ChIP_ZNF292_HepG2_ENCSR582TRX_counts_pattern_0.n_6775-vs-ZNF292-201.alignment counts-znf_b1h_alignment/ZNF292-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF292-201/pos_patterns.ENCSR853BYT_ChIP_ZNF292_HepG2_ENCSR582TRX_counts_pattern_10.n_108-vs-ZNF292-201.alignment counts-znf_b1h_alignment/ZNF292-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF292-201/pos_patterns.ENCSR853BYT_ChIP_ZNF292_HepG2_ENCSR582TRX_counts_pattern_11.n_92-vs-ZNF292-201.alignment counts-znf_b1h_alignment/ZNF292-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF292-201/pos_patterns.ENCSR853BYT_ChIP_ZNF292_HepG2_ENCSR582TRX_counts_pattern_12.n_61-vs-ZNF292-201.alignment counts-znf_b1h_alignment/ZNF292-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF292-201/pos_patterns.ENCSR853BYT_ChIP_ZNF292_HepG2_ENCSR582TRX_counts_pattern_13.n_29-vs-ZNF292-201.alignment counts-znf_b1h_alignment/ZNF292-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF292-201/pos_patterns.ENCSR853BYT_ChIP_ZNF292_HepG2_ENCSR582TRX_counts_pattern_14.n_29-vs-ZNF292-201.alignment counts-znf_b1h_alignment/ZNF292-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF292-201/pos_patterns.ENCSR853BYT_ChIP_ZNF292_HepG2_ENCSR582TRX_counts_pattern_15.n_28-vs-ZNF292-201.alignment counts-znf_b1h_alignment/ZNF292-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF292-201/pos_patterns.ENCSR853BYT_ChIP_ZNF292_HepG2_ENCSR582TRX_counts_pattern_16.n_23-vs-ZNF292-201.alignment counts-znf_b1h_alignment/ZNF292-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF292-201/pos_patterns.ENCSR853BYT_ChIP_ZNF292_HepG2_ENCSR582TRX_counts_pattern_1.n_2780-vs-ZNF292-201.alignment counts-znf_b1h_alignment/ZNF292-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF292-201/pos_patterns.ENCSR853BYT_ChIP_ZNF292_HepG2_ENCSR582TRX_counts_pattern_2.n_2703-vs-ZNF292-201.alignment counts-znf_b1h_alignment/ZNF292-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF292-201/pos_patterns.ENCSR853BYT_ChIP_ZNF292_HepG2_ENCSR582TRX_counts_pattern_3.n_1946-vs-ZNF292-201.alignment counts-znf_b1h_alignment/ZNF292-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF292-201/pos_patterns.ENCSR853BYT_ChIP_ZNF292_HepG2_ENCSR582TRX_counts_pattern_4.n_1397-vs-ZNF292-201.alignment counts-znf_b1h_alignment/ZNF292-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF292-201/pos_patterns.ENCSR853BYT_ChIP_ZNF292_HepG2_ENCSR582TRX_counts_pattern_5.n_809-vs-ZNF292-201.alignment counts-znf_b1h_alignment/ZNF292-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF292-201/pos_patterns.ENCSR853BYT_ChIP_ZNF292_HepG2_ENCSR582TRX_counts_pattern_6.n_502-vs-ZNF292-201.alignment counts-znf_b1h_alignment/ZNF292-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF292-201/pos_patterns.ENCSR853BYT_ChIP_ZNF292_HepG2_ENCSR582TRX_counts_pattern_7.n_438-vs-ZNF292-201.alignment counts-znf_b1h_alignment/ZNF292-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF292-201/pos_patterns.ENCSR853BYT_ChIP_ZNF292_HepG2_ENCSR582TRX_counts_pattern_8.n_271-vs-ZNF292-201.alignment counts-znf_b1h_alignment/ZNF292-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF292-201/pos_patterns.ENCSR853BYT_ChIP_ZNF292_HepG2_ENCSR582TRX_counts_pattern_9.n_271-vs-ZNF292-201.alignment counts-znf_b1h_alignment/ZNF292-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF296-201/pos_patterns.ENCSR862LJQ_ChIP_ZNF296_HepG2_ENCSR406XKS_counts_pattern_0.n_2617-vs-ZNF296-201.alignment counts-znf_b1h_alignment/ZNF296-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF296-201/pos_patterns.ENCSR862LJQ_ChIP_ZNF296_HepG2_ENCSR406XKS_counts_pattern_1.n_294-vs-ZNF296-201.alignment counts-znf_b1h_alignment/ZNF296-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF296-201/pos_patterns.ENCSR862LJQ_ChIP_ZNF296_HepG2_ENCSR406XKS_counts_pattern_2.n_253-vs-ZNF296-201.alignment counts-znf_b1h_alignment/ZNF296-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF296-201/pos_patterns.ENCSR862LJQ_ChIP_ZNF296_HepG2_ENCSR406XKS_counts_pattern_3.n_108-vs-ZNF296-201.alignment counts-znf_b1h_alignment/ZNF296-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF296-201/pos_patterns.ENCSR862LJQ_ChIP_ZNF296_HepG2_ENCSR406XKS_counts_pattern_4.n_88-vs-ZNF296-201.alignment counts-znf_b1h_alignment/ZNF296-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF296-201/pos_patterns.ENCSR862LJQ_ChIP_ZNF296_HepG2_ENCSR406XKS_counts_pattern_5.n_86-vs-ZNF296-201.alignment counts-znf_b1h_alignment/ZNF296-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF296-201/pos_patterns.ENCSR862LJQ_ChIP_ZNF296_HepG2_ENCSR406XKS_counts_pattern_6.n_84-vs-ZNF296-201.alignment counts-znf_b1h_alignment/ZNF296-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF296-201/pos_patterns.ENCSR862LJQ_ChIP_ZNF296_HepG2_ENCSR406XKS_counts_pattern_7.n_52-vs-ZNF296-201.alignment counts-znf_b1h_alignment/ZNF296-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF296-201/pos_patterns.ENCSR862LJQ_ChIP_ZNF296_HepG2_ENCSR406XKS_counts_pattern_8.n_22-vs-ZNF296-201.alignment counts-znf_b1h_alignment/ZNF296-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF300-201/ChipExo_models_ZNF300_counts-pos.pattern_0.n_148-vs-ZNF300-201.alignment counts-znf_b1h_alignment/ZNF300-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF300-201/ChipExo_models_ZNF300_counts-pos.pattern_1.n_23-vs-ZNF300-201.alignment counts-znf_b1h_alignment/ZNF300-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF30-201/ChipExo_models_ZNF30_counts-pos.pattern_0.n_57-vs-ZNF30-201.alignment counts-znf_b1h_alignment/ZNF30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF30-201/ChipExo_models_ZNF30_counts-pos.pattern_1.n_37-vs-ZNF30-201.alignment counts-znf_b1h_alignment/ZNF30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF30-201/ChipExo_models_ZNF30_counts-pos.pattern_2.n_25-vs-ZNF30-201.alignment counts-znf_b1h_alignment/ZNF30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF30-201/ChipExo_models_ZNF30_counts-pos.pattern_3.n_24-vs-ZNF30-201.alignment counts-znf_b1h_alignment/ZNF30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF30-201/Hughes_GR_models_ZNF30_counts-pos.pattern_0.n_211-vs-ZNF30-201.alignment counts-znf_b1h_alignment/ZNF30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF30-201/Hughes_GR_models_ZNF30_counts-pos.pattern_1.n_44-vs-ZNF30-201.alignment counts-znf_b1h_alignment/ZNF30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF30-201/Hughes_GR_models_ZNF30_counts-pos.pattern_2.n_35-vs-ZNF30-201.alignment counts-znf_b1h_alignment/ZNF30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF30-201/Hughes_GR_models_ZNF30_counts-pos.pattern_3.n_20-vs-ZNF30-201.alignment counts-znf_b1h_alignment/ZNF30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF30-201/neg_patterns.ENCSR891KNP_ChIP_ZNF30_HepG2_ENCSR688SGP_counts_pattern_0.n_86-vs-ZNF30-201.alignment counts-znf_b1h_alignment/ZNF30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF30-201/neg_patterns.ENCSR891KNP_ChIP_ZNF30_HepG2_ENCSR688SGP_counts_pattern_1.n_64-vs-ZNF30-201.alignment counts-znf_b1h_alignment/ZNF30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF30-201/neg_patterns.ENCSR891KNP_ChIP_ZNF30_HepG2_ENCSR688SGP_counts_pattern_2.n_40-vs-ZNF30-201.alignment counts-znf_b1h_alignment/ZNF30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF30-201/neg_patterns.ENCSR891KNP_ChIP_ZNF30_HepG2_ENCSR688SGP_counts_pattern_3.n_31-vs-ZNF30-201.alignment counts-znf_b1h_alignment/ZNF30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF30-201/pos_patterns.ENCSR891KNP_ChIP_ZNF30_HepG2_ENCSR688SGP_counts_pattern_0.n_1288-vs-ZNF30-201.alignment counts-znf_b1h_alignment/ZNF30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF30-201/pos_patterns.ENCSR891KNP_ChIP_ZNF30_HepG2_ENCSR688SGP_counts_pattern_10.n_40-vs-ZNF30-201.alignment counts-znf_b1h_alignment/ZNF30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF30-201/pos_patterns.ENCSR891KNP_ChIP_ZNF30_HepG2_ENCSR688SGP_counts_pattern_11.n_27-vs-ZNF30-201.alignment counts-znf_b1h_alignment/ZNF30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF30-201/pos_patterns.ENCSR891KNP_ChIP_ZNF30_HepG2_ENCSR688SGP_counts_pattern_12.n_25-vs-ZNF30-201.alignment counts-znf_b1h_alignment/ZNF30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF30-201/pos_patterns.ENCSR891KNP_ChIP_ZNF30_HepG2_ENCSR688SGP_counts_pattern_1.n_934-vs-ZNF30-201.alignment counts-znf_b1h_alignment/ZNF30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF30-201/pos_patterns.ENCSR891KNP_ChIP_ZNF30_HepG2_ENCSR688SGP_counts_pattern_2.n_728-vs-ZNF30-201.alignment counts-znf_b1h_alignment/ZNF30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF30-201/pos_patterns.ENCSR891KNP_ChIP_ZNF30_HepG2_ENCSR688SGP_counts_pattern_3.n_417-vs-ZNF30-201.alignment counts-znf_b1h_alignment/ZNF30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF30-201/pos_patterns.ENCSR891KNP_ChIP_ZNF30_HepG2_ENCSR688SGP_counts_pattern_4.n_331-vs-ZNF30-201.alignment counts-znf_b1h_alignment/ZNF30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF30-201/pos_patterns.ENCSR891KNP_ChIP_ZNF30_HepG2_ENCSR688SGP_counts_pattern_5.n_185-vs-ZNF30-201.alignment counts-znf_b1h_alignment/ZNF30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF30-201/pos_patterns.ENCSR891KNP_ChIP_ZNF30_HepG2_ENCSR688SGP_counts_pattern_6.n_166-vs-ZNF30-201.alignment counts-znf_b1h_alignment/ZNF30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF30-201/pos_patterns.ENCSR891KNP_ChIP_ZNF30_HepG2_ENCSR688SGP_counts_pattern_7.n_118-vs-ZNF30-201.alignment counts-znf_b1h_alignment/ZNF30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF30-201/pos_patterns.ENCSR891KNP_ChIP_ZNF30_HepG2_ENCSR688SGP_counts_pattern_8.n_102-vs-ZNF30-201.alignment counts-znf_b1h_alignment/ZNF30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF30-201/pos_patterns.ENCSR891KNP_ChIP_ZNF30_HepG2_ENCSR688SGP_counts_pattern_9.n_81-vs-ZNF30-201.alignment counts-znf_b1h_alignment/ZNF30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF302-201/ChipExo_models_ZNF302_counts-pos.pattern_0.n_227-vs-ZNF302-201.alignment counts-znf_b1h_alignment/ZNF302-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF302-201/ChipExo_models_ZNF302_counts-pos.pattern_1.n_47-vs-ZNF302-201.alignment counts-znf_b1h_alignment/ZNF302-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF302-201/pos_patterns.ENCSR513MGG_ChIP_ZNF302_HEK293_ENCSR967FUB_counts_pattern_0.n_134-vs-ZNF302-201.alignment counts-znf_b1h_alignment/ZNF302-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF302-201/pos_patterns.ENCSR513MGG_ChIP_ZNF302_HEK293_ENCSR967FUB_counts_pattern_1.n_132-vs-ZNF302-201.alignment counts-znf_b1h_alignment/ZNF302-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF302-201/pos_patterns.ENCSR513MGG_ChIP_ZNF302_HEK293_ENCSR967FUB_counts_pattern_2.n_120-vs-ZNF302-201.alignment counts-znf_b1h_alignment/ZNF302-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF302-201/pos_patterns.ENCSR513MGG_ChIP_ZNF302_HEK293_ENCSR967FUB_counts_pattern_3.n_115-vs-ZNF302-201.alignment counts-znf_b1h_alignment/ZNF302-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF302-201/pos_patterns.ENCSR513MGG_ChIP_ZNF302_HEK293_ENCSR967FUB_counts_pattern_4.n_71-vs-ZNF302-201.alignment counts-znf_b1h_alignment/ZNF302-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF302-201/pos_patterns.ENCSR513MGG_ChIP_ZNF302_HEK293_ENCSR967FUB_counts_pattern_5.n_26-vs-ZNF302-201.alignment counts-znf_b1h_alignment/ZNF302-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF302-201/pos_patterns.ENCSR590IHT_ChIP_ZNF302_A549_ENCSR124FDD_counts_pattern_0.n_518-vs-ZNF302-201.alignment counts-znf_b1h_alignment/ZNF302-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF302-201/pos_patterns.ENCSR590IHT_ChIP_ZNF302_A549_ENCSR124FDD_counts_pattern_10.n_31-vs-ZNF302-201.alignment counts-znf_b1h_alignment/ZNF302-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF302-201/pos_patterns.ENCSR590IHT_ChIP_ZNF302_A549_ENCSR124FDD_counts_pattern_11.n_24-vs-ZNF302-201.alignment counts-znf_b1h_alignment/ZNF302-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF302-201/pos_patterns.ENCSR590IHT_ChIP_ZNF302_A549_ENCSR124FDD_counts_pattern_1.n_315-vs-ZNF302-201.alignment counts-znf_b1h_alignment/ZNF302-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF302-201/pos_patterns.ENCSR590IHT_ChIP_ZNF302_A549_ENCSR124FDD_counts_pattern_2.n_110-vs-ZNF302-201.alignment counts-znf_b1h_alignment/ZNF302-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF302-201/pos_patterns.ENCSR590IHT_ChIP_ZNF302_A549_ENCSR124FDD_counts_pattern_3.n_82-vs-ZNF302-201.alignment counts-znf_b1h_alignment/ZNF302-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF302-201/pos_patterns.ENCSR590IHT_ChIP_ZNF302_A549_ENCSR124FDD_counts_pattern_4.n_78-vs-ZNF302-201.alignment counts-znf_b1h_alignment/ZNF302-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF302-201/pos_patterns.ENCSR590IHT_ChIP_ZNF302_A549_ENCSR124FDD_counts_pattern_5.n_57-vs-ZNF302-201.alignment counts-znf_b1h_alignment/ZNF302-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF302-201/pos_patterns.ENCSR590IHT_ChIP_ZNF302_A549_ENCSR124FDD_counts_pattern_6.n_56-vs-ZNF302-201.alignment counts-znf_b1h_alignment/ZNF302-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF302-201/pos_patterns.ENCSR590IHT_ChIP_ZNF302_A549_ENCSR124FDD_counts_pattern_7.n_49-vs-ZNF302-201.alignment counts-znf_b1h_alignment/ZNF302-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF302-201/pos_patterns.ENCSR590IHT_ChIP_ZNF302_A549_ENCSR124FDD_counts_pattern_8.n_49-vs-ZNF302-201.alignment counts-znf_b1h_alignment/ZNF302-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF302-201/pos_patterns.ENCSR590IHT_ChIP_ZNF302_A549_ENCSR124FDD_counts_pattern_9.n_35-vs-ZNF302-201.alignment counts-znf_b1h_alignment/ZNF302-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF304-201/ChipExo_models_ZNF304_counts-pos.pattern_0.n_1301-vs-ZNF304-201.alignment counts-znf_b1h_alignment/ZNF304-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF304-201/ChipExo_models_ZNF304_counts-pos.pattern_1.n_424-vs-ZNF304-201.alignment counts-znf_b1h_alignment/ZNF304-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF304-201/ChipExo_models_ZNF304_counts-pos.pattern_2.n_86-vs-ZNF304-201.alignment counts-znf_b1h_alignment/ZNF304-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF304-201/ChipExo_models_ZNF304_counts-pos.pattern_3.n_76-vs-ZNF304-201.alignment counts-znf_b1h_alignment/ZNF304-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF304-201/ChipExo_models_ZNF304_counts-pos.pattern_4.n_75-vs-ZNF304-201.alignment counts-znf_b1h_alignment/ZNF304-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF304-201/ChipExo_models_ZNF304_counts-pos.pattern_5.n_60-vs-ZNF304-201.alignment counts-znf_b1h_alignment/ZNF304-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF304-201/ChipExo_models_ZNF304_counts-pos.pattern_6.n_52-vs-ZNF304-201.alignment counts-znf_b1h_alignment/ZNF304-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF304-201/ChipExo_models_ZNF304_counts-pos.pattern_7.n_51-vs-ZNF304-201.alignment counts-znf_b1h_alignment/ZNF304-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF304-201/ChipExo_models_ZNF304_counts-pos.pattern_8.n_42-vs-ZNF304-201.alignment counts-znf_b1h_alignment/ZNF304-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF311-203/ChipExo_models_ZNF311_counts-pos.pattern_0.n_146-vs-ZNF311-203.alignment counts-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF311-203/ChipExo_models_ZNF311_counts-pos.pattern_1.n_37-vs-ZNF311-203.alignment counts-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF311-203/ChipExo_models_ZNF311_counts-pos.pattern_2.n_30-vs-ZNF311-203.alignment counts-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF311-203/ChipExo_models_ZNF311_counts-pos.pattern_3.n_20-vs-ZNF311-203.alignment counts-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF311-203/pos_patterns.ENCSR096LSN_ChIP_ZNF311_HEK293_ENCSR071XCI_counts_pattern_0.n_515-vs-ZNF311-203.alignment counts-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF311-203/pos_patterns.ENCSR096LSN_ChIP_ZNF311_HEK293_ENCSR071XCI_counts_pattern_1.n_195-vs-ZNF311-203.alignment counts-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF311-203/pos_patterns.ENCSR096LSN_ChIP_ZNF311_HEK293_ENCSR071XCI_counts_pattern_2.n_103-vs-ZNF311-203.alignment counts-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF311-203/pos_patterns.ENCSR096LSN_ChIP_ZNF311_HEK293_ENCSR071XCI_counts_pattern_3.n_59-vs-ZNF311-203.alignment counts-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF311-203/pos_patterns.ENCSR096LSN_ChIP_ZNF311_HEK293_ENCSR071XCI_counts_pattern_4.n_41-vs-ZNF311-203.alignment counts-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF311-203/pos_patterns.ENCSR388ZRV_ChIP_ZNF311_K562_ENCSR322JYC_counts_pattern_0.n_3554-vs-ZNF311-203.alignment counts-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF311-203/pos_patterns.ENCSR388ZRV_ChIP_ZNF311_K562_ENCSR322JYC_counts_pattern_10.n_20-vs-ZNF311-203.alignment counts-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF311-203/pos_patterns.ENCSR388ZRV_ChIP_ZNF311_K562_ENCSR322JYC_counts_pattern_1.n_2263-vs-ZNF311-203.alignment counts-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF311-203/pos_patterns.ENCSR388ZRV_ChIP_ZNF311_K562_ENCSR322JYC_counts_pattern_2.n_295-vs-ZNF311-203.alignment counts-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF311-203/pos_patterns.ENCSR388ZRV_ChIP_ZNF311_K562_ENCSR322JYC_counts_pattern_3.n_102-vs-ZNF311-203.alignment counts-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF311-203/pos_patterns.ENCSR388ZRV_ChIP_ZNF311_K562_ENCSR322JYC_counts_pattern_4.n_86-vs-ZNF311-203.alignment counts-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF311-203/pos_patterns.ENCSR388ZRV_ChIP_ZNF311_K562_ENCSR322JYC_counts_pattern_5.n_67-vs-ZNF311-203.alignment counts-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF311-203/pos_patterns.ENCSR388ZRV_ChIP_ZNF311_K562_ENCSR322JYC_counts_pattern_6.n_57-vs-ZNF311-203.alignment counts-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF311-203/pos_patterns.ENCSR388ZRV_ChIP_ZNF311_K562_ENCSR322JYC_counts_pattern_7.n_56-vs-ZNF311-203.alignment counts-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF311-203/pos_patterns.ENCSR388ZRV_ChIP_ZNF311_K562_ENCSR322JYC_counts_pattern_8.n_40-vs-ZNF311-203.alignment counts-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF311-203/pos_patterns.ENCSR388ZRV_ChIP_ZNF311_K562_ENCSR322JYC_counts_pattern_9.n_30-vs-ZNF311-203.alignment counts-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF316-201/neg_patterns.ENCSR167KBO_ChIP_ZNF316_K562_ENCSR989MRU_counts_pattern_0.n_53-vs-ZNF316-201.alignment counts-znf_b1h_alignment/ZNF316-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF316-201/neg_patterns.ENCSR167KBO_ChIP_ZNF316_K562_ENCSR989MRU_counts_pattern_1.n_45-vs-ZNF316-201.alignment counts-znf_b1h_alignment/ZNF316-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF316-201/neg_patterns.ENCSR167KBO_ChIP_ZNF316_K562_ENCSR989MRU_counts_pattern_2.n_20-vs-ZNF316-201.alignment counts-znf_b1h_alignment/ZNF316-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF316-201/neg_patterns.ENCSR200JYP_ChIP_ZNF316_K562_ENCSR182LDE_counts_pattern_0.n_43-vs-ZNF316-201.alignment counts-znf_b1h_alignment/ZNF316-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF316-201/neg_patterns.ENCSR200JYP_ChIP_ZNF316_K562_ENCSR182LDE_counts_pattern_1.n_39-vs-ZNF316-201.alignment counts-znf_b1h_alignment/ZNF316-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF316-201/neg_patterns.ENCSR200JYP_ChIP_ZNF316_K562_ENCSR182LDE_counts_pattern_2.n_39-vs-ZNF316-201.alignment counts-znf_b1h_alignment/ZNF316-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF316-201/neg_patterns.ENCSR200JYP_ChIP_ZNF316_K562_ENCSR182LDE_counts_pattern_3.n_34-vs-ZNF316-201.alignment counts-znf_b1h_alignment/ZNF316-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF316-201/pos_patterns.ENCSR167KBO_ChIP_ZNF316_K562_ENCSR989MRU_counts_pattern_0.n_12517-vs-ZNF316-201.alignment counts-znf_b1h_alignment/ZNF316-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF316-201/pos_patterns.ENCSR167KBO_ChIP_ZNF316_K562_ENCSR989MRU_counts_pattern_10.n_174-vs-ZNF316-201.alignment counts-znf_b1h_alignment/ZNF316-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF316-201/pos_patterns.ENCSR167KBO_ChIP_ZNF316_K562_ENCSR989MRU_counts_pattern_11.n_92-vs-ZNF316-201.alignment counts-znf_b1h_alignment/ZNF316-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF316-201/pos_patterns.ENCSR167KBO_ChIP_ZNF316_K562_ENCSR989MRU_counts_pattern_12.n_71-vs-ZNF316-201.alignment counts-znf_b1h_alignment/ZNF316-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF316-201/pos_patterns.ENCSR167KBO_ChIP_ZNF316_K562_ENCSR989MRU_counts_pattern_13.n_58-vs-ZNF316-201.alignment counts-znf_b1h_alignment/ZNF316-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF316-201/pos_patterns.ENCSR167KBO_ChIP_ZNF316_K562_ENCSR989MRU_counts_pattern_14.n_25-vs-ZNF316-201.alignment counts-znf_b1h_alignment/ZNF316-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF316-201/pos_patterns.ENCSR167KBO_ChIP_ZNF316_K562_ENCSR989MRU_counts_pattern_1.n_2420-vs-ZNF316-201.alignment counts-znf_b1h_alignment/ZNF316-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF316-201/pos_patterns.ENCSR167KBO_ChIP_ZNF316_K562_ENCSR989MRU_counts_pattern_2.n_2227-vs-ZNF316-201.alignment counts-znf_b1h_alignment/ZNF316-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF316-201/pos_patterns.ENCSR167KBO_ChIP_ZNF316_K562_ENCSR989MRU_counts_pattern_3.n_1972-vs-ZNF316-201.alignment counts-znf_b1h_alignment/ZNF316-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF316-201/pos_patterns.ENCSR167KBO_ChIP_ZNF316_K562_ENCSR989MRU_counts_pattern_4.n_592-vs-ZNF316-201.alignment counts-znf_b1h_alignment/ZNF316-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF316-201/pos_patterns.ENCSR167KBO_ChIP_ZNF316_K562_ENCSR989MRU_counts_pattern_5.n_540-vs-ZNF316-201.alignment counts-znf_b1h_alignment/ZNF316-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF316-201/pos_patterns.ENCSR167KBO_ChIP_ZNF316_K562_ENCSR989MRU_counts_pattern_6.n_361-vs-ZNF316-201.alignment counts-znf_b1h_alignment/ZNF316-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF316-201/pos_patterns.ENCSR167KBO_ChIP_ZNF316_K562_ENCSR989MRU_counts_pattern_7.n_259-vs-ZNF316-201.alignment counts-znf_b1h_alignment/ZNF316-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF316-201/pos_patterns.ENCSR167KBO_ChIP_ZNF316_K562_ENCSR989MRU_counts_pattern_8.n_220-vs-ZNF316-201.alignment counts-znf_b1h_alignment/ZNF316-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF316-201/pos_patterns.ENCSR167KBO_ChIP_ZNF316_K562_ENCSR989MRU_counts_pattern_9.n_190-vs-ZNF316-201.alignment counts-znf_b1h_alignment/ZNF316-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF316-201/pos_patterns.ENCSR200JYP_ChIP_ZNF316_K562_ENCSR182LDE_counts_pattern_0.n_14785-vs-ZNF316-201.alignment counts-znf_b1h_alignment/ZNF316-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF316-201/pos_patterns.ENCSR200JYP_ChIP_ZNF316_K562_ENCSR182LDE_counts_pattern_10.n_68-vs-ZNF316-201.alignment counts-znf_b1h_alignment/ZNF316-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF316-201/pos_patterns.ENCSR200JYP_ChIP_ZNF316_K562_ENCSR182LDE_counts_pattern_11.n_63-vs-ZNF316-201.alignment counts-znf_b1h_alignment/ZNF316-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF316-201/pos_patterns.ENCSR200JYP_ChIP_ZNF316_K562_ENCSR182LDE_counts_pattern_12.n_61-vs-ZNF316-201.alignment counts-znf_b1h_alignment/ZNF316-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF316-201/pos_patterns.ENCSR200JYP_ChIP_ZNF316_K562_ENCSR182LDE_counts_pattern_13.n_45-vs-ZNF316-201.alignment counts-znf_b1h_alignment/ZNF316-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF316-201/pos_patterns.ENCSR200JYP_ChIP_ZNF316_K562_ENCSR182LDE_counts_pattern_14.n_39-vs-ZNF316-201.alignment counts-znf_b1h_alignment/ZNF316-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF316-201/pos_patterns.ENCSR200JYP_ChIP_ZNF316_K562_ENCSR182LDE_counts_pattern_15.n_38-vs-ZNF316-201.alignment counts-znf_b1h_alignment/ZNF316-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF316-201/pos_patterns.ENCSR200JYP_ChIP_ZNF316_K562_ENCSR182LDE_counts_pattern_16.n_37-vs-ZNF316-201.alignment counts-znf_b1h_alignment/ZNF316-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF316-201/pos_patterns.ENCSR200JYP_ChIP_ZNF316_K562_ENCSR182LDE_counts_pattern_17.n_31-vs-ZNF316-201.alignment counts-znf_b1h_alignment/ZNF316-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF316-201/pos_patterns.ENCSR200JYP_ChIP_ZNF316_K562_ENCSR182LDE_counts_pattern_18.n_25-vs-ZNF316-201.alignment counts-znf_b1h_alignment/ZNF316-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF316-201/pos_patterns.ENCSR200JYP_ChIP_ZNF316_K562_ENCSR182LDE_counts_pattern_19.n_21-vs-ZNF316-201.alignment counts-znf_b1h_alignment/ZNF316-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF316-201/pos_patterns.ENCSR200JYP_ChIP_ZNF316_K562_ENCSR182LDE_counts_pattern_1.n_1504-vs-ZNF316-201.alignment counts-znf_b1h_alignment/ZNF316-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF316-201/pos_patterns.ENCSR200JYP_ChIP_ZNF316_K562_ENCSR182LDE_counts_pattern_2.n_423-vs-ZNF316-201.alignment counts-znf_b1h_alignment/ZNF316-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF316-201/pos_patterns.ENCSR200JYP_ChIP_ZNF316_K562_ENCSR182LDE_counts_pattern_3.n_407-vs-ZNF316-201.alignment counts-znf_b1h_alignment/ZNF316-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF316-201/pos_patterns.ENCSR200JYP_ChIP_ZNF316_K562_ENCSR182LDE_counts_pattern_4.n_332-vs-ZNF316-201.alignment counts-znf_b1h_alignment/ZNF316-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF316-201/pos_patterns.ENCSR200JYP_ChIP_ZNF316_K562_ENCSR182LDE_counts_pattern_5.n_320-vs-ZNF316-201.alignment counts-znf_b1h_alignment/ZNF316-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF316-201/pos_patterns.ENCSR200JYP_ChIP_ZNF316_K562_ENCSR182LDE_counts_pattern_6.n_162-vs-ZNF316-201.alignment counts-znf_b1h_alignment/ZNF316-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF316-201/pos_patterns.ENCSR200JYP_ChIP_ZNF316_K562_ENCSR182LDE_counts_pattern_7.n_136-vs-ZNF316-201.alignment counts-znf_b1h_alignment/ZNF316-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF316-201/pos_patterns.ENCSR200JYP_ChIP_ZNF316_K562_ENCSR182LDE_counts_pattern_8.n_134-vs-ZNF316-201.alignment counts-znf_b1h_alignment/ZNF316-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF316-201/pos_patterns.ENCSR200JYP_ChIP_ZNF316_K562_ENCSR182LDE_counts_pattern_9.n_77-vs-ZNF316-201.alignment counts-znf_b1h_alignment/ZNF316-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/ChipExo_models_ZNF317_counts-pos.pattern_0.n_4802-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/ChipExo_models_ZNF317_counts-pos.pattern_1.n_3124-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/ChipExo_models_ZNF317_counts-pos.pattern_2.n_253-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/ChipExo_models_ZNF317_counts-pos.pattern_3.n_189-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/ChipExo_models_ZNF317_counts-pos.pattern_4.n_146-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/ChipExo_models_ZNF317_counts-pos.pattern_5.n_73-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/ChipExo_models_ZNF317_counts-pos.pattern_6.n_39-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/Hughes_GR_models_ZNF317_counts-pos.pattern_0.n_13470-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/Hughes_GR_models_ZNF317_counts-pos.pattern_10.n_118-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/Hughes_GR_models_ZNF317_counts-pos.pattern_11.n_111-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/Hughes_GR_models_ZNF317_counts-pos.pattern_12.n_80-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/Hughes_GR_models_ZNF317_counts-pos.pattern_13.n_53-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/Hughes_GR_models_ZNF317_counts-pos.pattern_14.n_53-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/Hughes_GR_models_ZNF317_counts-pos.pattern_1.n_7255-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/Hughes_GR_models_ZNF317_counts-pos.pattern_2.n_1715-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/Hughes_GR_models_ZNF317_counts-pos.pattern_3.n_957-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/Hughes_GR_models_ZNF317_counts-pos.pattern_4.n_627-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/Hughes_GR_models_ZNF317_counts-pos.pattern_5.n_540-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/Hughes_GR_models_ZNF317_counts-pos.pattern_6.n_503-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/Hughes_GR_models_ZNF317_counts-pos.pattern_7.n_493-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/Hughes_GR_models_ZNF317_counts-pos.pattern_8.n_201-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/Hughes_GR_models_ZNF317_counts-pos.pattern_9.n_178-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/Hughes_NB_models_ZNF317_counts-pos.pattern_0.n_2282-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/Hughes_NB_models_ZNF317_counts-pos.pattern_1.n_1573-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/Hughes_NB_models_ZNF317_counts-pos.pattern_2.n_156-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/Hughes_NB_models_ZNF317_counts-pos.pattern_3.n_102-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/Hughes_NB_models_ZNF317_counts-pos.pattern_4.n_65-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/neg_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_counts_pattern_0.n_49-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/neg_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_counts_pattern_1.n_28-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/neg_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_counts_pattern_2.n_28-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/neg_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_counts_pattern_3.n_22-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/neg_patterns.ENCSR795KRU_ChIP_ZNF317_WTC11_ENCSR329FHN_counts_pattern_0.n_44-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/neg_patterns.ENCSR795KRU_ChIP_ZNF317_WTC11_ENCSR329FHN_counts_pattern_1.n_27-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/neg_patterns.ENCSR795KRU_ChIP_ZNF317_WTC11_ENCSR329FHN_counts_pattern_2.n_25-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/neg_patterns.ENCSR976MXN_ChIP_ZNF317_K562_ENCSR390SED_counts_pattern_0.n_58-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/neg_patterns.ENCSR976MXN_ChIP_ZNF317_K562_ENCSR390SED_counts_pattern_1.n_36-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/neg_patterns.ENCSR976MXN_ChIP_ZNF317_K562_ENCSR390SED_counts_pattern_2.n_30-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/neg_patterns.ENCSR976MXN_ChIP_ZNF317_K562_ENCSR390SED_counts_pattern_3.n_23-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/neg_patterns.ENCSR976MXN_ChIP_ZNF317_K562_ENCSR390SED_counts_pattern_4.n_22-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_counts_pattern_0.n_3035-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_counts_pattern_10.n_236-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_counts_pattern_11.n_187-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_counts_pattern_12.n_144-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_counts_pattern_13.n_128-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_counts_pattern_14.n_119-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_counts_pattern_15.n_86-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_counts_pattern_16.n_51-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_counts_pattern_17.n_48-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_counts_pattern_18.n_32-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_counts_pattern_19.n_25-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_counts_pattern_1.n_1614-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_counts_pattern_20.n_22-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_counts_pattern_2.n_1511-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_counts_pattern_3.n_1302-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_counts_pattern_4.n_954-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_counts_pattern_5.n_388-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_counts_pattern_6.n_341-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_counts_pattern_7.n_309-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_counts_pattern_8.n_301-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_counts_pattern_9.n_245-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR795KRU_ChIP_ZNF317_WTC11_ENCSR329FHN_counts_pattern_0.n_3595-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR795KRU_ChIP_ZNF317_WTC11_ENCSR329FHN_counts_pattern_1.n_1242-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR795KRU_ChIP_ZNF317_WTC11_ENCSR329FHN_counts_pattern_2.n_713-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR795KRU_ChIP_ZNF317_WTC11_ENCSR329FHN_counts_pattern_3.n_216-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR795KRU_ChIP_ZNF317_WTC11_ENCSR329FHN_counts_pattern_4.n_194-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR795KRU_ChIP_ZNF317_WTC11_ENCSR329FHN_counts_pattern_5.n_101-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR795KRU_ChIP_ZNF317_WTC11_ENCSR329FHN_counts_pattern_6.n_82-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR795KRU_ChIP_ZNF317_WTC11_ENCSR329FHN_counts_pattern_7.n_76-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR795KRU_ChIP_ZNF317_WTC11_ENCSR329FHN_counts_pattern_8.n_36-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR795KRU_ChIP_ZNF317_WTC11_ENCSR329FHN_counts_pattern_9.n_32-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR976MXN_ChIP_ZNF317_K562_ENCSR390SED_counts_pattern_0.n_4398-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR976MXN_ChIP_ZNF317_K562_ENCSR390SED_counts_pattern_10.n_60-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR976MXN_ChIP_ZNF317_K562_ENCSR390SED_counts_pattern_11.n_38-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR976MXN_ChIP_ZNF317_K562_ENCSR390SED_counts_pattern_12.n_26-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR976MXN_ChIP_ZNF317_K562_ENCSR390SED_counts_pattern_1.n_1752-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR976MXN_ChIP_ZNF317_K562_ENCSR390SED_counts_pattern_2.n_894-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR976MXN_ChIP_ZNF317_K562_ENCSR390SED_counts_pattern_3.n_250-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR976MXN_ChIP_ZNF317_K562_ENCSR390SED_counts_pattern_4.n_191-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR976MXN_ChIP_ZNF317_K562_ENCSR390SED_counts_pattern_5.n_189-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR976MXN_ChIP_ZNF317_K562_ENCSR390SED_counts_pattern_6.n_146-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR976MXN_ChIP_ZNF317_K562_ENCSR390SED_counts_pattern_7.n_96-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR976MXN_ChIP_ZNF317_K562_ENCSR390SED_counts_pattern_8.n_94-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR976MXN_ChIP_ZNF317_K562_ENCSR390SED_counts_pattern_9.n_62-vs-ZNF317-201.alignment counts-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/neg_patterns.ENCSR334HSW_ChIP_ZNF318_K562_ENCSR964MJN_counts_pattern_0.n_135-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/neg_patterns.ENCSR334HSW_ChIP_ZNF318_K562_ENCSR964MJN_counts_pattern_10.n_35-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/neg_patterns.ENCSR334HSW_ChIP_ZNF318_K562_ENCSR964MJN_counts_pattern_11.n_34-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/neg_patterns.ENCSR334HSW_ChIP_ZNF318_K562_ENCSR964MJN_counts_pattern_12.n_33-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/neg_patterns.ENCSR334HSW_ChIP_ZNF318_K562_ENCSR964MJN_counts_pattern_13.n_28-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/neg_patterns.ENCSR334HSW_ChIP_ZNF318_K562_ENCSR964MJN_counts_pattern_14.n_29-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/neg_patterns.ENCSR334HSW_ChIP_ZNF318_K562_ENCSR964MJN_counts_pattern_15.n_24-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/neg_patterns.ENCSR334HSW_ChIP_ZNF318_K562_ENCSR964MJN_counts_pattern_16.n_23-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/neg_patterns.ENCSR334HSW_ChIP_ZNF318_K562_ENCSR964MJN_counts_pattern_17.n_21-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/neg_patterns.ENCSR334HSW_ChIP_ZNF318_K562_ENCSR964MJN_counts_pattern_18.n_20-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/neg_patterns.ENCSR334HSW_ChIP_ZNF318_K562_ENCSR964MJN_counts_pattern_19.n_20-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/neg_patterns.ENCSR334HSW_ChIP_ZNF318_K562_ENCSR964MJN_counts_pattern_1.n_87-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/neg_patterns.ENCSR334HSW_ChIP_ZNF318_K562_ENCSR964MJN_counts_pattern_2.n_68-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/neg_patterns.ENCSR334HSW_ChIP_ZNF318_K562_ENCSR964MJN_counts_pattern_3.n_57-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/neg_patterns.ENCSR334HSW_ChIP_ZNF318_K562_ENCSR964MJN_counts_pattern_4.n_47-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/neg_patterns.ENCSR334HSW_ChIP_ZNF318_K562_ENCSR964MJN_counts_pattern_5.n_42-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/neg_patterns.ENCSR334HSW_ChIP_ZNF318_K562_ENCSR964MJN_counts_pattern_6.n_42-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/neg_patterns.ENCSR334HSW_ChIP_ZNF318_K562_ENCSR964MJN_counts_pattern_7.n_42-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/neg_patterns.ENCSR334HSW_ChIP_ZNF318_K562_ENCSR964MJN_counts_pattern_8.n_37-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/neg_patterns.ENCSR334HSW_ChIP_ZNF318_K562_ENCSR964MJN_counts_pattern_9.n_37-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/neg_patterns.ENCSR832PID_ChIP_ZNF318_HepG2_ENCSR911CCE_counts_pattern_0.n_360-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/neg_patterns.ENCSR832PID_ChIP_ZNF318_HepG2_ENCSR911CCE_counts_pattern_1.n_274-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/neg_patterns.ENCSR832PID_ChIP_ZNF318_HepG2_ENCSR911CCE_counts_pattern_2.n_185-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/neg_patterns.ENCSR832PID_ChIP_ZNF318_HepG2_ENCSR911CCE_counts_pattern_3.n_29-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR334HSW_ChIP_ZNF318_K562_ENCSR964MJN_counts_pattern_0.n_122-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR334HSW_ChIP_ZNF318_K562_ENCSR964MJN_counts_pattern_1.n_75-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR334HSW_ChIP_ZNF318_K562_ENCSR964MJN_counts_pattern_2.n_52-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR334HSW_ChIP_ZNF318_K562_ENCSR964MJN_counts_pattern_3.n_38-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR334HSW_ChIP_ZNF318_K562_ENCSR964MJN_counts_pattern_4.n_38-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR334HSW_ChIP_ZNF318_K562_ENCSR964MJN_counts_pattern_5.n_35-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR334HSW_ChIP_ZNF318_K562_ENCSR964MJN_counts_pattern_6.n_34-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR334HSW_ChIP_ZNF318_K562_ENCSR964MJN_counts_pattern_7.n_33-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR334HSW_ChIP_ZNF318_K562_ENCSR964MJN_counts_pattern_8.n_24-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR334HSW_ChIP_ZNF318_K562_ENCSR964MJN_counts_pattern_9.n_23-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR352BJL_ChIP_ZNF318_K562_ENCSR621BIB_counts_pattern_0.n_2680-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR352BJL_ChIP_ZNF318_K562_ENCSR621BIB_counts_pattern_1.n_1422-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR352BJL_ChIP_ZNF318_K562_ENCSR621BIB_counts_pattern_2.n_1155-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR352BJL_ChIP_ZNF318_K562_ENCSR621BIB_counts_pattern_3.n_1073-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR352BJL_ChIP_ZNF318_K562_ENCSR621BIB_counts_pattern_4.n_779-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR352BJL_ChIP_ZNF318_K562_ENCSR621BIB_counts_pattern_5.n_248-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR352BJL_ChIP_ZNF318_K562_ENCSR621BIB_counts_pattern_6.n_156-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR352BJL_ChIP_ZNF318_K562_ENCSR621BIB_counts_pattern_7.n_61-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR352BJL_ChIP_ZNF318_K562_ENCSR621BIB_counts_pattern_8.n_56-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR352BJL_ChIP_ZNF318_K562_ENCSR621BIB_counts_pattern_9.n_33-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR832PID_ChIP_ZNF318_HepG2_ENCSR911CCE_counts_pattern_0.n_1492-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR832PID_ChIP_ZNF318_HepG2_ENCSR911CCE_counts_pattern_10.n_51-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR832PID_ChIP_ZNF318_HepG2_ENCSR911CCE_counts_pattern_11.n_28-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR832PID_ChIP_ZNF318_HepG2_ENCSR911CCE_counts_pattern_12.n_23-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR832PID_ChIP_ZNF318_HepG2_ENCSR911CCE_counts_pattern_1.n_1171-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR832PID_ChIP_ZNF318_HepG2_ENCSR911CCE_counts_pattern_2.n_909-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR832PID_ChIP_ZNF318_HepG2_ENCSR911CCE_counts_pattern_3.n_656-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR832PID_ChIP_ZNF318_HepG2_ENCSR911CCE_counts_pattern_4.n_364-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR832PID_ChIP_ZNF318_HepG2_ENCSR911CCE_counts_pattern_5.n_346-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR832PID_ChIP_ZNF318_HepG2_ENCSR911CCE_counts_pattern_6.n_342-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR832PID_ChIP_ZNF318_HepG2_ENCSR911CCE_counts_pattern_7.n_278-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR832PID_ChIP_ZNF318_HepG2_ENCSR911CCE_counts_pattern_8.n_243-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR832PID_ChIP_ZNF318_HepG2_ENCSR911CCE_counts_pattern_9.n_73-vs-ZNF318-201.alignment counts-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF319-201/neg_patterns.ENCSR231PDA_ChIP_ZNF319_K562_ENCSR603UUT_counts_pattern_0.n_498-vs-ZNF319-201.alignment counts-znf_b1h_alignment/ZNF319-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF319-201/neg_patterns.ENCSR231PDA_ChIP_ZNF319_K562_ENCSR603UUT_counts_pattern_1.n_354-vs-ZNF319-201.alignment counts-znf_b1h_alignment/ZNF319-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF319-201/neg_patterns.ENCSR231PDA_ChIP_ZNF319_K562_ENCSR603UUT_counts_pattern_2.n_281-vs-ZNF319-201.alignment counts-znf_b1h_alignment/ZNF319-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF319-201/neg_patterns.ENCSR231PDA_ChIP_ZNF319_K562_ENCSR603UUT_counts_pattern_3.n_130-vs-ZNF319-201.alignment counts-znf_b1h_alignment/ZNF319-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF319-201/neg_patterns.ENCSR231PDA_ChIP_ZNF319_K562_ENCSR603UUT_counts_pattern_4.n_54-vs-ZNF319-201.alignment counts-znf_b1h_alignment/ZNF319-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF319-201/neg_patterns.ENCSR231PDA_ChIP_ZNF319_K562_ENCSR603UUT_counts_pattern_5.n_50-vs-ZNF319-201.alignment counts-znf_b1h_alignment/ZNF319-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF319-201/neg_patterns.ENCSR231PDA_ChIP_ZNF319_K562_ENCSR603UUT_counts_pattern_6.n_30-vs-ZNF319-201.alignment counts-znf_b1h_alignment/ZNF319-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF319-201/pos_patterns.ENCSR231PDA_ChIP_ZNF319_K562_ENCSR603UUT_counts_pattern_0.n_5496-vs-ZNF319-201.alignment counts-znf_b1h_alignment/ZNF319-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF319-201/pos_patterns.ENCSR231PDA_ChIP_ZNF319_K562_ENCSR603UUT_counts_pattern_1.n_2616-vs-ZNF319-201.alignment counts-znf_b1h_alignment/ZNF319-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF319-201/pos_patterns.ENCSR231PDA_ChIP_ZNF319_K562_ENCSR603UUT_counts_pattern_2.n_173-vs-ZNF319-201.alignment counts-znf_b1h_alignment/ZNF319-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF319-201/pos_patterns.ENCSR231PDA_ChIP_ZNF319_K562_ENCSR603UUT_counts_pattern_3.n_158-vs-ZNF319-201.alignment counts-znf_b1h_alignment/ZNF319-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF319-201/pos_patterns.ENCSR231PDA_ChIP_ZNF319_K562_ENCSR603UUT_counts_pattern_4.n_129-vs-ZNF319-201.alignment counts-znf_b1h_alignment/ZNF319-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF319-201/pos_patterns.ENCSR231PDA_ChIP_ZNF319_K562_ENCSR603UUT_counts_pattern_5.n_100-vs-ZNF319-201.alignment counts-znf_b1h_alignment/ZNF319-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF319-201/pos_patterns.ENCSR231PDA_ChIP_ZNF319_K562_ENCSR603UUT_counts_pattern_6.n_56-vs-ZNF319-201.alignment counts-znf_b1h_alignment/ZNF319-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF319-201/pos_patterns.ENCSR231PDA_ChIP_ZNF319_K562_ENCSR603UUT_counts_pattern_7.n_47-vs-ZNF319-201.alignment counts-znf_b1h_alignment/ZNF319-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF319-201/pos_patterns.ENCSR231PDA_ChIP_ZNF319_K562_ENCSR603UUT_counts_pattern_8.n_29-vs-ZNF319-201.alignment counts-znf_b1h_alignment/ZNF319-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF319-201/pos_patterns.ENCSR231PDA_ChIP_ZNF319_K562_ENCSR603UUT_counts_pattern_9.n_24-vs-ZNF319-201.alignment counts-znf_b1h_alignment/ZNF319-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF320-204/ChipExo_models_ZNF320_counts-pos.pattern_0.n_4856-vs-ZNF320-204.alignment counts-znf_b1h_alignment/ZNF320-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF320-204/ChipExo_models_ZNF320_counts-pos.pattern_1.n_75-vs-ZNF320-204.alignment counts-znf_b1h_alignment/ZNF320-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF320-204/Hughes_GR_models_ZNF320_counts-pos.pattern_0.n_4026-vs-ZNF320-204.alignment counts-znf_b1h_alignment/ZNF320-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF320-204/Hughes_GR_models_ZNF320_counts-pos.pattern_1.n_3252-vs-ZNF320-204.alignment counts-znf_b1h_alignment/ZNF320-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF320-204/Hughes_GR_models_ZNF320_counts-pos.pattern_2.n_255-vs-ZNF320-204.alignment counts-znf_b1h_alignment/ZNF320-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF320-204/Hughes_GR_models_ZNF320_counts-pos.pattern_3.n_191-vs-ZNF320-204.alignment counts-znf_b1h_alignment/ZNF320-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF320-204/Hughes_GR_models_ZNF320_counts-pos.pattern_4.n_54-vs-ZNF320-204.alignment counts-znf_b1h_alignment/ZNF320-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF320-204/Hughes_GR_models_ZNF320_counts-pos.pattern_5.n_51-vs-ZNF320-204.alignment counts-znf_b1h_alignment/ZNF320-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF320-204/Hughes_GR_models_ZNF320_counts-pos.pattern_6.n_33-vs-ZNF320-204.alignment counts-znf_b1h_alignment/ZNF320-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF320-204/Hughes_GR_models_ZNF320_counts-pos.pattern_7.n_27-vs-ZNF320-204.alignment counts-znf_b1h_alignment/ZNF320-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF320-204/Hughes_GR_models_ZNF320_counts-pos.pattern_8.n_23-vs-ZNF320-204.alignment counts-znf_b1h_alignment/ZNF320-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF3-202/ChipExo_models_ZNF3_counts-pos.pattern_0.n_226-vs-ZNF3-202.alignment counts-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR182QWU_ChIP_ZNF3_HepG2_ENCSR581SAI_counts_pattern_0.n_2292-vs-ZNF3-202.alignment counts-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR182QWU_ChIP_ZNF3_HepG2_ENCSR581SAI_counts_pattern_10.n_37-vs-ZNF3-202.alignment counts-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR182QWU_ChIP_ZNF3_HepG2_ENCSR581SAI_counts_pattern_11.n_32-vs-ZNF3-202.alignment counts-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR182QWU_ChIP_ZNF3_HepG2_ENCSR581SAI_counts_pattern_12.n_32-vs-ZNF3-202.alignment counts-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR182QWU_ChIP_ZNF3_HepG2_ENCSR581SAI_counts_pattern_13.n_24-vs-ZNF3-202.alignment counts-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR182QWU_ChIP_ZNF3_HepG2_ENCSR581SAI_counts_pattern_14.n_23-vs-ZNF3-202.alignment counts-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR182QWU_ChIP_ZNF3_HepG2_ENCSR581SAI_counts_pattern_15.n_22-vs-ZNF3-202.alignment counts-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR182QWU_ChIP_ZNF3_HepG2_ENCSR581SAI_counts_pattern_1.n_394-vs-ZNF3-202.alignment counts-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR182QWU_ChIP_ZNF3_HepG2_ENCSR581SAI_counts_pattern_2.n_386-vs-ZNF3-202.alignment counts-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR182QWU_ChIP_ZNF3_HepG2_ENCSR581SAI_counts_pattern_3.n_376-vs-ZNF3-202.alignment counts-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR182QWU_ChIP_ZNF3_HepG2_ENCSR581SAI_counts_pattern_4.n_203-vs-ZNF3-202.alignment counts-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR182QWU_ChIP_ZNF3_HepG2_ENCSR581SAI_counts_pattern_5.n_153-vs-ZNF3-202.alignment counts-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR182QWU_ChIP_ZNF3_HepG2_ENCSR581SAI_counts_pattern_6.n_134-vs-ZNF3-202.alignment counts-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR182QWU_ChIP_ZNF3_HepG2_ENCSR581SAI_counts_pattern_7.n_115-vs-ZNF3-202.alignment counts-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR182QWU_ChIP_ZNF3_HepG2_ENCSR581SAI_counts_pattern_8.n_69-vs-ZNF3-202.alignment counts-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR182QWU_ChIP_ZNF3_HepG2_ENCSR581SAI_counts_pattern_9.n_67-vs-ZNF3-202.alignment counts-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR195QFV_ChIP_ZNF3_K562_ENCSR943BMU_counts_pattern_0.n_473-vs-ZNF3-202.alignment counts-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR195QFV_ChIP_ZNF3_K562_ENCSR943BMU_counts_pattern_1.n_283-vs-ZNF3-202.alignment counts-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR195QFV_ChIP_ZNF3_K562_ENCSR943BMU_counts_pattern_2.n_118-vs-ZNF3-202.alignment counts-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR195QFV_ChIP_ZNF3_K562_ENCSR943BMU_counts_pattern_3.n_94-vs-ZNF3-202.alignment counts-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR195QFV_ChIP_ZNF3_K562_ENCSR943BMU_counts_pattern_4.n_85-vs-ZNF3-202.alignment counts-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR195QFV_ChIP_ZNF3_K562_ENCSR943BMU_counts_pattern_5.n_70-vs-ZNF3-202.alignment counts-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR195QFV_ChIP_ZNF3_K562_ENCSR943BMU_counts_pattern_6.n_54-vs-ZNF3-202.alignment counts-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR195QFV_ChIP_ZNF3_K562_ENCSR943BMU_counts_pattern_7.n_47-vs-ZNF3-202.alignment counts-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR195QFV_ChIP_ZNF3_K562_ENCSR943BMU_counts_pattern_8.n_39-vs-ZNF3-202.alignment counts-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR195QFV_ChIP_ZNF3_K562_ENCSR943BMU_counts_pattern_9.n_20-vs-ZNF3-202.alignment counts-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR934RJP_ChIP_ZNF3_K562_ENCSR155QUT_counts_pattern_0.n_637-vs-ZNF3-202.alignment counts-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR934RJP_ChIP_ZNF3_K562_ENCSR155QUT_counts_pattern_1.n_132-vs-ZNF3-202.alignment counts-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR934RJP_ChIP_ZNF3_K562_ENCSR155QUT_counts_pattern_2.n_34-vs-ZNF3-202.alignment counts-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR934RJP_ChIP_ZNF3_K562_ENCSR155QUT_counts_pattern_3.n_21-vs-ZNF3-202.alignment counts-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF322-201/Hughes_GR_models_ZNF322_counts-pos.pattern_0.n_1582-vs-ZNF322-201.alignment counts-znf_b1h_alignment/ZNF322-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF322-201/Hughes_GR_models_ZNF322_counts-pos.pattern_1.n_59-vs-ZNF322-201.alignment counts-znf_b1h_alignment/ZNF322-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF322-201/Hughes_NB_models_ZNF322_counts-pos.pattern_0.n_14135-vs-ZNF322-201.alignment counts-znf_b1h_alignment/ZNF322-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF322-201/Hughes_NB_models_ZNF322_counts-pos.pattern_1.n_6184-vs-ZNF322-201.alignment counts-znf_b1h_alignment/ZNF322-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF322-201/Hughes_NB_models_ZNF322_counts-pos.pattern_2.n_3657-vs-ZNF322-201.alignment counts-znf_b1h_alignment/ZNF322-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF322-201/Hughes_NB_models_ZNF322_counts-pos.pattern_3.n_906-vs-ZNF322-201.alignment counts-znf_b1h_alignment/ZNF322-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF322-201/Hughes_NB_models_ZNF322_counts-pos.pattern_4.n_749-vs-ZNF322-201.alignment counts-znf_b1h_alignment/ZNF322-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF324-201/ChipExo_models_ZNF324_counts-pos.pattern_0.n_106-vs-ZNF324-201.alignment counts-znf_b1h_alignment/ZNF324-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF324-201/ChipExo_models_ZNF324_counts-pos.pattern_1.n_58-vs-ZNF324-201.alignment counts-znf_b1h_alignment/ZNF324-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF324-201/ChipExo_models_ZNF324_counts-pos.pattern_2.n_39-vs-ZNF324-201.alignment counts-znf_b1h_alignment/ZNF324-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF324-201/Hughes_GR_models_ZNF324_counts-pos.pattern_0.n_1194-vs-ZNF324-201.alignment counts-znf_b1h_alignment/ZNF324-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF324-201/pos_patterns.ENCSR712KVZ_ChIP_ZNF324_K562_ENCSR861IYW_counts_pattern_0.n_3006-vs-ZNF324-201.alignment counts-znf_b1h_alignment/ZNF324-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF324-201/pos_patterns.ENCSR712KVZ_ChIP_ZNF324_K562_ENCSR861IYW_counts_pattern_1.n_476-vs-ZNF324-201.alignment counts-znf_b1h_alignment/ZNF324-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF324-201/pos_patterns.ENCSR768HOH_ChIP_ZNF324_HEK293_ENCSR245QAZ_counts_pattern_0.n_1942-vs-ZNF324-201.alignment counts-znf_b1h_alignment/ZNF324-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF324-201/pos_patterns.ENCSR768HOH_ChIP_ZNF324_HEK293_ENCSR245QAZ_counts_pattern_10.n_38-vs-ZNF324-201.alignment counts-znf_b1h_alignment/ZNF324-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF324-201/pos_patterns.ENCSR768HOH_ChIP_ZNF324_HEK293_ENCSR245QAZ_counts_pattern_11.n_23-vs-ZNF324-201.alignment counts-znf_b1h_alignment/ZNF324-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF324-201/pos_patterns.ENCSR768HOH_ChIP_ZNF324_HEK293_ENCSR245QAZ_counts_pattern_1.n_1640-vs-ZNF324-201.alignment counts-znf_b1h_alignment/ZNF324-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF324-201/pos_patterns.ENCSR768HOH_ChIP_ZNF324_HEK293_ENCSR245QAZ_counts_pattern_2.n_1071-vs-ZNF324-201.alignment counts-znf_b1h_alignment/ZNF324-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF324-201/pos_patterns.ENCSR768HOH_ChIP_ZNF324_HEK293_ENCSR245QAZ_counts_pattern_3.n_770-vs-ZNF324-201.alignment counts-znf_b1h_alignment/ZNF324-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF324-201/pos_patterns.ENCSR768HOH_ChIP_ZNF324_HEK293_ENCSR245QAZ_counts_pattern_4.n_427-vs-ZNF324-201.alignment counts-znf_b1h_alignment/ZNF324-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF324-201/pos_patterns.ENCSR768HOH_ChIP_ZNF324_HEK293_ENCSR245QAZ_counts_pattern_5.n_387-vs-ZNF324-201.alignment counts-znf_b1h_alignment/ZNF324-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF324-201/pos_patterns.ENCSR768HOH_ChIP_ZNF324_HEK293_ENCSR245QAZ_counts_pattern_6.n_308-vs-ZNF324-201.alignment counts-znf_b1h_alignment/ZNF324-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF324-201/pos_patterns.ENCSR768HOH_ChIP_ZNF324_HEK293_ENCSR245QAZ_counts_pattern_7.n_235-vs-ZNF324-201.alignment counts-znf_b1h_alignment/ZNF324-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF324-201/pos_patterns.ENCSR768HOH_ChIP_ZNF324_HEK293_ENCSR245QAZ_counts_pattern_8.n_170-vs-ZNF324-201.alignment counts-znf_b1h_alignment/ZNF324-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF324-201/pos_patterns.ENCSR768HOH_ChIP_ZNF324_HEK293_ENCSR245QAZ_counts_pattern_9.n_51-vs-ZNF324-201.alignment counts-znf_b1h_alignment/ZNF324-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF329-201/Hughes_GR_models_ZNF329_counts-pos.pattern_0.n_901-vs-ZNF329-201.alignment counts-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF329-201/neg_patterns.ENCSR681KXT_ChIP_ZNF329_HepG2_ENCSR113XXA_counts_pattern_0.n_51-vs-ZNF329-201.alignment counts-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF329-201/neg_patterns.ENCSR681KXT_ChIP_ZNF329_HepG2_ENCSR113XXA_counts_pattern_1.n_23-vs-ZNF329-201.alignment counts-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF329-201/pos_patterns.ENCSR681KXT_ChIP_ZNF329_HepG2_ENCSR113XXA_counts_pattern_0.n_1326-vs-ZNF329-201.alignment counts-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF329-201/pos_patterns.ENCSR681KXT_ChIP_ZNF329_HepG2_ENCSR113XXA_counts_pattern_10.n_23-vs-ZNF329-201.alignment counts-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF329-201/pos_patterns.ENCSR681KXT_ChIP_ZNF329_HepG2_ENCSR113XXA_counts_pattern_11.n_22-vs-ZNF329-201.alignment counts-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF329-201/pos_patterns.ENCSR681KXT_ChIP_ZNF329_HepG2_ENCSR113XXA_counts_pattern_1.n_1310-vs-ZNF329-201.alignment counts-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF329-201/pos_patterns.ENCSR681KXT_ChIP_ZNF329_HepG2_ENCSR113XXA_counts_pattern_2.n_1163-vs-ZNF329-201.alignment counts-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF329-201/pos_patterns.ENCSR681KXT_ChIP_ZNF329_HepG2_ENCSR113XXA_counts_pattern_3.n_976-vs-ZNF329-201.alignment counts-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF329-201/pos_patterns.ENCSR681KXT_ChIP_ZNF329_HepG2_ENCSR113XXA_counts_pattern_4.n_767-vs-ZNF329-201.alignment counts-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF329-201/pos_patterns.ENCSR681KXT_ChIP_ZNF329_HepG2_ENCSR113XXA_counts_pattern_5.n_236-vs-ZNF329-201.alignment counts-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF329-201/pos_patterns.ENCSR681KXT_ChIP_ZNF329_HepG2_ENCSR113XXA_counts_pattern_6.n_226-vs-ZNF329-201.alignment counts-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF329-201/pos_patterns.ENCSR681KXT_ChIP_ZNF329_HepG2_ENCSR113XXA_counts_pattern_7.n_53-vs-ZNF329-201.alignment counts-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF329-201/pos_patterns.ENCSR681KXT_ChIP_ZNF329_HepG2_ENCSR113XXA_counts_pattern_8.n_39-vs-ZNF329-201.alignment counts-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF329-201/pos_patterns.ENCSR681KXT_ChIP_ZNF329_HepG2_ENCSR113XXA_counts_pattern_9.n_36-vs-ZNF329-201.alignment counts-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF331-201/ChipExo_models_ZNF331_counts-pos.pattern_0.n_1008-vs-ZNF331-201.alignment counts-znf_b1h_alignment/ZNF331-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF331-201/Hughes_GR_models_ZNF331_counts-pos.pattern_0.n_2521-vs-ZNF331-201.alignment counts-znf_b1h_alignment/ZNF331-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF331-201/Hughes_GR_models_ZNF331_counts-pos.pattern_1.n_323-vs-ZNF331-201.alignment counts-znf_b1h_alignment/ZNF331-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF331-201/Hughes_GR_models_ZNF331_counts-pos.pattern_2.n_143-vs-ZNF331-201.alignment counts-znf_b1h_alignment/ZNF331-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF331-201/Hughes_GR_models_ZNF331_counts-pos.pattern_3.n_52-vs-ZNF331-201.alignment counts-znf_b1h_alignment/ZNF331-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF331-201/Hughes_GR_models_ZNF331_counts-pos.pattern_4.n_25-vs-ZNF331-201.alignment counts-znf_b1h_alignment/ZNF331-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF331-201/Hughes_GR_models_ZNF331_counts-pos.pattern_5.n_23-vs-ZNF331-201.alignment counts-znf_b1h_alignment/ZNF331-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF331-201/neg_patterns.ENCSR918LRB_ChIP_ZNF331_GM23338_ENCSR494MGN_counts_pattern_0.n_29-vs-ZNF331-201.alignment counts-znf_b1h_alignment/ZNF331-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF331-201/neg_patterns.ENCSR918LRB_ChIP_ZNF331_GM23338_ENCSR494MGN_counts_pattern_1.n_27-vs-ZNF331-201.alignment counts-znf_b1h_alignment/ZNF331-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF331-201/neg_patterns.ENCSR918LRB_ChIP_ZNF331_GM23338_ENCSR494MGN_counts_pattern_2.n_21-vs-ZNF331-201.alignment counts-znf_b1h_alignment/ZNF331-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF331-201/pos_patterns.ENCSR369TCR_ChIP_ZNF331_HepG2_ENCSR536CRO_counts_pattern_0.n_5146-vs-ZNF331-201.alignment counts-znf_b1h_alignment/ZNF331-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF331-201/pos_patterns.ENCSR369TCR_ChIP_ZNF331_HepG2_ENCSR536CRO_counts_pattern_10.n_418-vs-ZNF331-201.alignment counts-znf_b1h_alignment/ZNF331-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF331-201/pos_patterns.ENCSR369TCR_ChIP_ZNF331_HepG2_ENCSR536CRO_counts_pattern_11.n_362-vs-ZNF331-201.alignment counts-znf_b1h_alignment/ZNF331-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF331-201/pos_patterns.ENCSR369TCR_ChIP_ZNF331_HepG2_ENCSR536CRO_counts_pattern_12.n_276-vs-ZNF331-201.alignment counts-znf_b1h_alignment/ZNF331-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF331-201/pos_patterns.ENCSR369TCR_ChIP_ZNF331_HepG2_ENCSR536CRO_counts_pattern_13.n_159-vs-ZNF331-201.alignment counts-znf_b1h_alignment/ZNF331-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF331-201/pos_patterns.ENCSR369TCR_ChIP_ZNF331_HepG2_ENCSR536CRO_counts_pattern_14.n_78-vs-ZNF331-201.alignment counts-znf_b1h_alignment/ZNF331-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF331-201/pos_patterns.ENCSR369TCR_ChIP_ZNF331_HepG2_ENCSR536CRO_counts_pattern_15.n_42-vs-ZNF331-201.alignment counts-znf_b1h_alignment/ZNF331-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF331-201/pos_patterns.ENCSR369TCR_ChIP_ZNF331_HepG2_ENCSR536CRO_counts_pattern_16.n_42-vs-ZNF331-201.alignment counts-znf_b1h_alignment/ZNF331-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF331-201/pos_patterns.ENCSR369TCR_ChIP_ZNF331_HepG2_ENCSR536CRO_counts_pattern_17.n_38-vs-ZNF331-201.alignment counts-znf_b1h_alignment/ZNF331-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF331-201/pos_patterns.ENCSR369TCR_ChIP_ZNF331_HepG2_ENCSR536CRO_counts_pattern_18.n_24-vs-ZNF331-201.alignment counts-znf_b1h_alignment/ZNF331-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF331-201/pos_patterns.ENCSR369TCR_ChIP_ZNF331_HepG2_ENCSR536CRO_counts_pattern_1.n_3356-vs-ZNF331-201.alignment counts-znf_b1h_alignment/ZNF331-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF331-201/pos_patterns.ENCSR369TCR_ChIP_ZNF331_HepG2_ENCSR536CRO_counts_pattern_2.n_3017-vs-ZNF331-201.alignment counts-znf_b1h_alignment/ZNF331-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF331-201/pos_patterns.ENCSR369TCR_ChIP_ZNF331_HepG2_ENCSR536CRO_counts_pattern_3.n_2357-vs-ZNF331-201.alignment counts-znf_b1h_alignment/ZNF331-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF331-201/pos_patterns.ENCSR369TCR_ChIP_ZNF331_HepG2_ENCSR536CRO_counts_pattern_4.n_2349-vs-ZNF331-201.alignment counts-znf_b1h_alignment/ZNF331-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF331-201/pos_patterns.ENCSR369TCR_ChIP_ZNF331_HepG2_ENCSR536CRO_counts_pattern_5.n_1183-vs-ZNF331-201.alignment counts-znf_b1h_alignment/ZNF331-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF331-201/pos_patterns.ENCSR369TCR_ChIP_ZNF331_HepG2_ENCSR536CRO_counts_pattern_6.n_1090-vs-ZNF331-201.alignment counts-znf_b1h_alignment/ZNF331-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF331-201/pos_patterns.ENCSR369TCR_ChIP_ZNF331_HepG2_ENCSR536CRO_counts_pattern_7.n_645-vs-ZNF331-201.alignment counts-znf_b1h_alignment/ZNF331-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF331-201/pos_patterns.ENCSR369TCR_ChIP_ZNF331_HepG2_ENCSR536CRO_counts_pattern_8.n_635-vs-ZNF331-201.alignment counts-znf_b1h_alignment/ZNF331-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF331-201/pos_patterns.ENCSR369TCR_ChIP_ZNF331_HepG2_ENCSR536CRO_counts_pattern_9.n_543-vs-ZNF331-201.alignment counts-znf_b1h_alignment/ZNF331-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF331-201/pos_patterns.ENCSR860XVO_ChIP_ZNF331_MCF-7_ENCSR529AFD_counts_pattern_0.n_727-vs-ZNF331-201.alignment counts-znf_b1h_alignment/ZNF331-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF331-201/pos_patterns.ENCSR860XVO_ChIP_ZNF331_MCF-7_ENCSR529AFD_counts_pattern_1.n_167-vs-ZNF331-201.alignment counts-znf_b1h_alignment/ZNF331-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF331-201/pos_patterns.ENCSR860XVO_ChIP_ZNF331_MCF-7_ENCSR529AFD_counts_pattern_2.n_61-vs-ZNF331-201.alignment counts-znf_b1h_alignment/ZNF331-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF331-201/pos_patterns.ENCSR860XVO_ChIP_ZNF331_MCF-7_ENCSR529AFD_counts_pattern_3.n_50-vs-ZNF331-201.alignment counts-znf_b1h_alignment/ZNF331-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF331-201/pos_patterns.ENCSR860XVO_ChIP_ZNF331_MCF-7_ENCSR529AFD_counts_pattern_4.n_43-vs-ZNF331-201.alignment counts-znf_b1h_alignment/ZNF331-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF331-201/pos_patterns.ENCSR860XVO_ChIP_ZNF331_MCF-7_ENCSR529AFD_counts_pattern_5.n_41-vs-ZNF331-201.alignment counts-znf_b1h_alignment/ZNF331-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF331-201/pos_patterns.ENCSR918LRB_ChIP_ZNF331_GM23338_ENCSR494MGN_counts_pattern_0.n_1967-vs-ZNF331-201.alignment counts-znf_b1h_alignment/ZNF331-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF331-201/pos_patterns.ENCSR918LRB_ChIP_ZNF331_GM23338_ENCSR494MGN_counts_pattern_1.n_81-vs-ZNF331-201.alignment counts-znf_b1h_alignment/ZNF331-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF331-201/pos_patterns.ENCSR918LRB_ChIP_ZNF331_GM23338_ENCSR494MGN_counts_pattern_2.n_73-vs-ZNF331-201.alignment counts-znf_b1h_alignment/ZNF331-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF331-201/pos_patterns.ENCSR918LRB_ChIP_ZNF331_GM23338_ENCSR494MGN_counts_pattern_3.n_72-vs-ZNF331-201.alignment counts-znf_b1h_alignment/ZNF331-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF331-201/pos_patterns.ENCSR918LRB_ChIP_ZNF331_GM23338_ENCSR494MGN_counts_pattern_4.n_21-vs-ZNF331-201.alignment counts-znf_b1h_alignment/ZNF331-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF333-201/ChipExo_models_ZNF333_counts-pos.pattern_0.n_774-vs-ZNF333-201.alignment counts-znf_b1h_alignment/ZNF333-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF333-201/ChipExo_models_ZNF333_counts-pos.pattern_1.n_157-vs-ZNF333-201.alignment counts-znf_b1h_alignment/ZNF333-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF333-201/ChipExo_models_ZNF333_counts-pos.pattern_2.n_81-vs-ZNF333-201.alignment counts-znf_b1h_alignment/ZNF333-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF333-201/ChipExo_models_ZNF333_counts-pos.pattern_3.n_55-vs-ZNF333-201.alignment counts-znf_b1h_alignment/ZNF333-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF333-201/ChipExo_models_ZNF333_counts-pos.pattern_4.n_43-vs-ZNF333-201.alignment counts-znf_b1h_alignment/ZNF333-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF333-201/pos_patterns.ENCSR505UNL_ChIP_ZNF333_HepG2_ENCSR988WYI_counts_pattern_0.n_2129-vs-ZNF333-201.alignment counts-znf_b1h_alignment/ZNF333-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF333-201/pos_patterns.ENCSR505UNL_ChIP_ZNF333_HepG2_ENCSR988WYI_counts_pattern_10.n_26-vs-ZNF333-201.alignment counts-znf_b1h_alignment/ZNF333-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF333-201/pos_patterns.ENCSR505UNL_ChIP_ZNF333_HepG2_ENCSR988WYI_counts_pattern_1.n_1921-vs-ZNF333-201.alignment counts-znf_b1h_alignment/ZNF333-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF333-201/pos_patterns.ENCSR505UNL_ChIP_ZNF333_HepG2_ENCSR988WYI_counts_pattern_2.n_1729-vs-ZNF333-201.alignment counts-znf_b1h_alignment/ZNF333-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF333-201/pos_patterns.ENCSR505UNL_ChIP_ZNF333_HepG2_ENCSR988WYI_counts_pattern_3.n_1475-vs-ZNF333-201.alignment counts-znf_b1h_alignment/ZNF333-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF333-201/pos_patterns.ENCSR505UNL_ChIP_ZNF333_HepG2_ENCSR988WYI_counts_pattern_4.n_934-vs-ZNF333-201.alignment counts-znf_b1h_alignment/ZNF333-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF333-201/pos_patterns.ENCSR505UNL_ChIP_ZNF333_HepG2_ENCSR988WYI_counts_pattern_5.n_306-vs-ZNF333-201.alignment counts-znf_b1h_alignment/ZNF333-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF333-201/pos_patterns.ENCSR505UNL_ChIP_ZNF333_HepG2_ENCSR988WYI_counts_pattern_6.n_191-vs-ZNF333-201.alignment counts-znf_b1h_alignment/ZNF333-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF333-201/pos_patterns.ENCSR505UNL_ChIP_ZNF333_HepG2_ENCSR988WYI_counts_pattern_7.n_54-vs-ZNF333-201.alignment counts-znf_b1h_alignment/ZNF333-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF333-201/pos_patterns.ENCSR505UNL_ChIP_ZNF333_HepG2_ENCSR988WYI_counts_pattern_8.n_36-vs-ZNF333-201.alignment counts-znf_b1h_alignment/ZNF333-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF333-201/pos_patterns.ENCSR505UNL_ChIP_ZNF333_HepG2_ENCSR988WYI_counts_pattern_9.n_34-vs-ZNF333-201.alignment counts-znf_b1h_alignment/ZNF333-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF334-201/ChipExo_models_ZNF334_counts-neg.pattern_0.n_136-vs-ZNF334-201.alignment counts-znf_b1h_alignment/ZNF334-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF334-201/ChipExo_models_ZNF334_counts-neg.pattern_1.n_37-vs-ZNF334-201.alignment counts-znf_b1h_alignment/ZNF334-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF334-201/ChipExo_models_ZNF334_counts-neg.pattern_2.n_34-vs-ZNF334-201.alignment counts-znf_b1h_alignment/ZNF334-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF334-201/ChipExo_models_ZNF334_counts-neg.pattern_3.n_31-vs-ZNF334-201.alignment counts-znf_b1h_alignment/ZNF334-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF334-201/ChipExo_models_ZNF334_counts-neg.pattern_4.n_30-vs-ZNF334-201.alignment counts-znf_b1h_alignment/ZNF334-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF334-201/ChipExo_models_ZNF334_counts-neg.pattern_5.n_29-vs-ZNF334-201.alignment counts-znf_b1h_alignment/ZNF334-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF334-201/ChipExo_models_ZNF334_counts-neg.pattern_6.n_23-vs-ZNF334-201.alignment counts-znf_b1h_alignment/ZNF334-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF334-201/ChipExo_models_ZNF334_counts-neg.pattern_7.n_23-vs-ZNF334-201.alignment counts-znf_b1h_alignment/ZNF334-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF334-201/ChipExo_models_ZNF334_counts-pos.pattern_0.n_829-vs-ZNF334-201.alignment counts-znf_b1h_alignment/ZNF334-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF334-201/ChipExo_models_ZNF334_counts-pos.pattern_10.n_31-vs-ZNF334-201.alignment counts-znf_b1h_alignment/ZNF334-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF334-201/ChipExo_models_ZNF334_counts-pos.pattern_1.n_741-vs-ZNF334-201.alignment counts-znf_b1h_alignment/ZNF334-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF334-201/ChipExo_models_ZNF334_counts-pos.pattern_2.n_705-vs-ZNF334-201.alignment counts-znf_b1h_alignment/ZNF334-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF334-201/ChipExo_models_ZNF334_counts-pos.pattern_3.n_254-vs-ZNF334-201.alignment counts-znf_b1h_alignment/ZNF334-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF334-201/ChipExo_models_ZNF334_counts-pos.pattern_4.n_188-vs-ZNF334-201.alignment counts-znf_b1h_alignment/ZNF334-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF334-201/ChipExo_models_ZNF334_counts-pos.pattern_5.n_123-vs-ZNF334-201.alignment counts-znf_b1h_alignment/ZNF334-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF334-201/ChipExo_models_ZNF334_counts-pos.pattern_6.n_88-vs-ZNF334-201.alignment counts-znf_b1h_alignment/ZNF334-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF334-201/ChipExo_models_ZNF334_counts-pos.pattern_7.n_45-vs-ZNF334-201.alignment counts-znf_b1h_alignment/ZNF334-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF334-201/ChipExo_models_ZNF334_counts-pos.pattern_8.n_40-vs-ZNF334-201.alignment counts-znf_b1h_alignment/ZNF334-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF334-201/ChipExo_models_ZNF334_counts-pos.pattern_9.n_36-vs-ZNF334-201.alignment counts-znf_b1h_alignment/ZNF334-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF337-201/ChipExo_models_ZNF337_counts-pos.pattern_0.n_436-vs-ZNF337-201.alignment counts-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF337-201/ChipExo_models_ZNF337_counts-pos.pattern_1.n_195-vs-ZNF337-201.alignment counts-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF337-201/ChipExo_models_ZNF337_counts-pos.pattern_2.n_112-vs-ZNF337-201.alignment counts-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF337-201/ChipExo_models_ZNF337_counts-pos.pattern_3.n_64-vs-ZNF337-201.alignment counts-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF337-201/neg_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_counts_pattern_0.n_111-vs-ZNF337-201.alignment counts-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF337-201/neg_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_counts_pattern_10.n_52-vs-ZNF337-201.alignment counts-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF337-201/neg_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_counts_pattern_11.n_39-vs-ZNF337-201.alignment counts-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF337-201/neg_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_counts_pattern_12.n_38-vs-ZNF337-201.alignment counts-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF337-201/neg_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_counts_pattern_13.n_36-vs-ZNF337-201.alignment counts-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF337-201/neg_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_counts_pattern_14.n_28-vs-ZNF337-201.alignment counts-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF337-201/neg_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_counts_pattern_15.n_24-vs-ZNF337-201.alignment counts-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF337-201/neg_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_counts_pattern_16.n_23-vs-ZNF337-201.alignment counts-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF337-201/neg_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_counts_pattern_1.n_108-vs-ZNF337-201.alignment counts-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF337-201/neg_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_counts_pattern_2.n_81-vs-ZNF337-201.alignment counts-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF337-201/neg_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_counts_pattern_3.n_76-vs-ZNF337-201.alignment counts-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF337-201/neg_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_counts_pattern_4.n_74-vs-ZNF337-201.alignment counts-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF337-201/neg_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_counts_pattern_5.n_69-vs-ZNF337-201.alignment counts-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF337-201/neg_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_counts_pattern_6.n_64-vs-ZNF337-201.alignment counts-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF337-201/neg_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_counts_pattern_7.n_62-vs-ZNF337-201.alignment counts-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF337-201/neg_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_counts_pattern_8.n_61-vs-ZNF337-201.alignment counts-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF337-201/neg_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_counts_pattern_9.n_54-vs-ZNF337-201.alignment counts-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF337-201/pos_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_counts_pattern_0.n_1219-vs-ZNF337-201.alignment counts-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF337-201/pos_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_counts_pattern_10.n_185-vs-ZNF337-201.alignment counts-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF337-201/pos_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_counts_pattern_11.n_147-vs-ZNF337-201.alignment counts-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF337-201/pos_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_counts_pattern_12.n_111-vs-ZNF337-201.alignment counts-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF337-201/pos_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_counts_pattern_13.n_46-vs-ZNF337-201.alignment counts-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF337-201/pos_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_counts_pattern_14.n_33-vs-ZNF337-201.alignment counts-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF337-201/pos_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_counts_pattern_15.n_27-vs-ZNF337-201.alignment counts-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF337-201/pos_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_counts_pattern_1.n_923-vs-ZNF337-201.alignment counts-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF337-201/pos_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_counts_pattern_2.n_722-vs-ZNF337-201.alignment counts-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF337-201/pos_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_counts_pattern_3.n_258-vs-ZNF337-201.alignment counts-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF337-201/pos_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_counts_pattern_4.n_255-vs-ZNF337-201.alignment counts-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF337-201/pos_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_counts_pattern_5.n_250-vs-ZNF337-201.alignment counts-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF337-201/pos_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_counts_pattern_6.n_235-vs-ZNF337-201.alignment counts-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF337-201/pos_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_counts_pattern_7.n_215-vs-ZNF337-201.alignment counts-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF337-201/pos_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_counts_pattern_8.n_214-vs-ZNF337-201.alignment counts-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF337-201/pos_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_counts_pattern_9.n_192-vs-ZNF337-201.alignment counts-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33A-201/ChipExo_models_ZNF33A_counts-pos.pattern_0.n_893-vs-ZNF33A-201.alignment counts-znf_b1h_alignment/ZNF33A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33A-201/ChipExo_models_ZNF33A_counts-pos.pattern_1.n_289-vs-ZNF33A-201.alignment counts-znf_b1h_alignment/ZNF33A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33A-201/ChipExo_models_ZNF33A_counts-pos.pattern_2.n_119-vs-ZNF33A-201.alignment counts-znf_b1h_alignment/ZNF33A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33A-201/ChipExo_models_ZNF33A_counts-pos.pattern_3.n_29-vs-ZNF33A-201.alignment counts-znf_b1h_alignment/ZNF33A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33A-201/ChipExo_models_ZNF33A_counts-pos.pattern_4.n_23-vs-ZNF33A-201.alignment counts-znf_b1h_alignment/ZNF33A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33A-201/neg_patterns.ENCSR110BYN_ChIP_ZNF33A_HepG2_ENCSR721ODG_counts_pattern_0.n_128-vs-ZNF33A-201.alignment counts-znf_b1h_alignment/ZNF33A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33A-201/neg_patterns.ENCSR110BYN_ChIP_ZNF33A_HepG2_ENCSR721ODG_counts_pattern_1.n_75-vs-ZNF33A-201.alignment counts-znf_b1h_alignment/ZNF33A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33A-201/neg_patterns.ENCSR110BYN_ChIP_ZNF33A_HepG2_ENCSR721ODG_counts_pattern_2.n_57-vs-ZNF33A-201.alignment counts-znf_b1h_alignment/ZNF33A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33A-201/neg_patterns.ENCSR110BYN_ChIP_ZNF33A_HepG2_ENCSR721ODG_counts_pattern_3.n_43-vs-ZNF33A-201.alignment counts-znf_b1h_alignment/ZNF33A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33A-201/neg_patterns.ENCSR110BYN_ChIP_ZNF33A_HepG2_ENCSR721ODG_counts_pattern_4.n_42-vs-ZNF33A-201.alignment counts-znf_b1h_alignment/ZNF33A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33A-201/neg_patterns.ENCSR110BYN_ChIP_ZNF33A_HepG2_ENCSR721ODG_counts_pattern_5.n_37-vs-ZNF33A-201.alignment counts-znf_b1h_alignment/ZNF33A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33A-201/neg_patterns.ENCSR110BYN_ChIP_ZNF33A_HepG2_ENCSR721ODG_counts_pattern_6.n_22-vs-ZNF33A-201.alignment counts-znf_b1h_alignment/ZNF33A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33A-201/pos_patterns.ENCSR110BYN_ChIP_ZNF33A_HepG2_ENCSR721ODG_counts_pattern_0.n_1722-vs-ZNF33A-201.alignment counts-znf_b1h_alignment/ZNF33A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33A-201/pos_patterns.ENCSR110BYN_ChIP_ZNF33A_HepG2_ENCSR721ODG_counts_pattern_1.n_943-vs-ZNF33A-201.alignment counts-znf_b1h_alignment/ZNF33A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33A-201/pos_patterns.ENCSR110BYN_ChIP_ZNF33A_HepG2_ENCSR721ODG_counts_pattern_2.n_882-vs-ZNF33A-201.alignment counts-znf_b1h_alignment/ZNF33A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33A-201/pos_patterns.ENCSR110BYN_ChIP_ZNF33A_HepG2_ENCSR721ODG_counts_pattern_3.n_396-vs-ZNF33A-201.alignment counts-znf_b1h_alignment/ZNF33A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33A-201/pos_patterns.ENCSR110BYN_ChIP_ZNF33A_HepG2_ENCSR721ODG_counts_pattern_4.n_357-vs-ZNF33A-201.alignment counts-znf_b1h_alignment/ZNF33A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33A-201/pos_patterns.ENCSR110BYN_ChIP_ZNF33A_HepG2_ENCSR721ODG_counts_pattern_5.n_340-vs-ZNF33A-201.alignment counts-znf_b1h_alignment/ZNF33A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33A-201/pos_patterns.ENCSR110BYN_ChIP_ZNF33A_HepG2_ENCSR721ODG_counts_pattern_6.n_251-vs-ZNF33A-201.alignment counts-znf_b1h_alignment/ZNF33A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33A-201/pos_patterns.ENCSR110BYN_ChIP_ZNF33A_HepG2_ENCSR721ODG_counts_pattern_7.n_122-vs-ZNF33A-201.alignment counts-znf_b1h_alignment/ZNF33A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33A-203/ChipExo_models_ZNF33A_counts-pos.pattern_0.n_893-vs-ZNF33A-203.alignment counts-znf_b1h_alignment/ZNF33A-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33A-203/ChipExo_models_ZNF33A_counts-pos.pattern_1.n_289-vs-ZNF33A-203.alignment counts-znf_b1h_alignment/ZNF33A-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33A-203/ChipExo_models_ZNF33A_counts-pos.pattern_2.n_119-vs-ZNF33A-203.alignment counts-znf_b1h_alignment/ZNF33A-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33A-203/ChipExo_models_ZNF33A_counts-pos.pattern_3.n_29-vs-ZNF33A-203.alignment counts-znf_b1h_alignment/ZNF33A-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33A-203/ChipExo_models_ZNF33A_counts-pos.pattern_4.n_23-vs-ZNF33A-203.alignment counts-znf_b1h_alignment/ZNF33A-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33A-203/neg_patterns.ENCSR110BYN_ChIP_ZNF33A_HepG2_ENCSR721ODG_counts_pattern_0.n_128-vs-ZNF33A-203.alignment counts-znf_b1h_alignment/ZNF33A-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33A-203/neg_patterns.ENCSR110BYN_ChIP_ZNF33A_HepG2_ENCSR721ODG_counts_pattern_1.n_75-vs-ZNF33A-203.alignment counts-znf_b1h_alignment/ZNF33A-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33A-203/neg_patterns.ENCSR110BYN_ChIP_ZNF33A_HepG2_ENCSR721ODG_counts_pattern_2.n_57-vs-ZNF33A-203.alignment counts-znf_b1h_alignment/ZNF33A-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33A-203/neg_patterns.ENCSR110BYN_ChIP_ZNF33A_HepG2_ENCSR721ODG_counts_pattern_3.n_43-vs-ZNF33A-203.alignment counts-znf_b1h_alignment/ZNF33A-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33A-203/neg_patterns.ENCSR110BYN_ChIP_ZNF33A_HepG2_ENCSR721ODG_counts_pattern_4.n_42-vs-ZNF33A-203.alignment counts-znf_b1h_alignment/ZNF33A-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33A-203/neg_patterns.ENCSR110BYN_ChIP_ZNF33A_HepG2_ENCSR721ODG_counts_pattern_5.n_37-vs-ZNF33A-203.alignment counts-znf_b1h_alignment/ZNF33A-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33A-203/neg_patterns.ENCSR110BYN_ChIP_ZNF33A_HepG2_ENCSR721ODG_counts_pattern_6.n_22-vs-ZNF33A-203.alignment counts-znf_b1h_alignment/ZNF33A-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33A-203/pos_patterns.ENCSR110BYN_ChIP_ZNF33A_HepG2_ENCSR721ODG_counts_pattern_0.n_1722-vs-ZNF33A-203.alignment counts-znf_b1h_alignment/ZNF33A-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33A-203/pos_patterns.ENCSR110BYN_ChIP_ZNF33A_HepG2_ENCSR721ODG_counts_pattern_1.n_943-vs-ZNF33A-203.alignment counts-znf_b1h_alignment/ZNF33A-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33A-203/pos_patterns.ENCSR110BYN_ChIP_ZNF33A_HepG2_ENCSR721ODG_counts_pattern_2.n_882-vs-ZNF33A-203.alignment counts-znf_b1h_alignment/ZNF33A-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33A-203/pos_patterns.ENCSR110BYN_ChIP_ZNF33A_HepG2_ENCSR721ODG_counts_pattern_3.n_396-vs-ZNF33A-203.alignment counts-znf_b1h_alignment/ZNF33A-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33A-203/pos_patterns.ENCSR110BYN_ChIP_ZNF33A_HepG2_ENCSR721ODG_counts_pattern_4.n_357-vs-ZNF33A-203.alignment counts-znf_b1h_alignment/ZNF33A-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33A-203/pos_patterns.ENCSR110BYN_ChIP_ZNF33A_HepG2_ENCSR721ODG_counts_pattern_5.n_340-vs-ZNF33A-203.alignment counts-znf_b1h_alignment/ZNF33A-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33A-203/pos_patterns.ENCSR110BYN_ChIP_ZNF33A_HepG2_ENCSR721ODG_counts_pattern_6.n_251-vs-ZNF33A-203.alignment counts-znf_b1h_alignment/ZNF33A-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33A-203/pos_patterns.ENCSR110BYN_ChIP_ZNF33A_HepG2_ENCSR721ODG_counts_pattern_7.n_122-vs-ZNF33A-203.alignment counts-znf_b1h_alignment/ZNF33A-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/ChipExo_models_ZNF33B_counts-pos.pattern_0.n_157-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/ChipExo_models_ZNF33B_counts-pos.pattern_1.n_58-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/neg_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_0.n_171-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/neg_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_10.n_100-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/neg_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_11.n_97-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/neg_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_12.n_94-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/neg_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_13.n_87-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/neg_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_14.n_69-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/neg_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_15.n_69-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/neg_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_16.n_63-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/neg_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_17.n_60-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/neg_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_18.n_46-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/neg_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_19.n_45-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/neg_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_1.n_169-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/neg_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_20.n_41-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/neg_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_21.n_34-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/neg_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_22.n_26-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/neg_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_2.n_158-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/neg_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_3.n_156-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/neg_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_4.n_153-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/neg_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_5.n_149-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/neg_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_6.n_140-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/neg_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_7.n_135-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/neg_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_8.n_129-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/neg_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_9.n_101-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/pos_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_0.n_2035-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/pos_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_10.n_285-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/pos_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_11.n_285-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/pos_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_12.n_275-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/pos_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_13.n_265-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/pos_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_14.n_261-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/pos_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_15.n_257-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/pos_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_16.n_248-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/pos_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_17.n_241-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/pos_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_18.n_202-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/pos_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_19.n_136-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/pos_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_1.n_956-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/pos_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_20.n_133-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/pos_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_21.n_126-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/pos_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_22.n_106-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/pos_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_23.n_99-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/pos_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_24.n_90-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/pos_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_25.n_77-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/pos_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_26.n_29-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/pos_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_2.n_765-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/pos_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_3.n_749-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/pos_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_4.n_548-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/pos_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_5.n_450-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/pos_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_6.n_391-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/pos_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_7.n_308-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/pos_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_8.n_306-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF33B-201/pos_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_counts_pattern_9.n_298-vs-ZNF33B-201.alignment counts-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-203/Hughes_GR_models_ZNF341_counts-pos.pattern_0.n_4323-vs-ZNF341-203.alignment counts-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-203/Hughes_GR_models_ZNF341_counts-pos.pattern_10.n_21-vs-ZNF341-203.alignment counts-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-203/Hughes_GR_models_ZNF341_counts-pos.pattern_1.n_1629-vs-ZNF341-203.alignment counts-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-203/Hughes_GR_models_ZNF341_counts-pos.pattern_2.n_311-vs-ZNF341-203.alignment counts-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-203/Hughes_GR_models_ZNF341_counts-pos.pattern_3.n_59-vs-ZNF341-203.alignment counts-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-203/Hughes_GR_models_ZNF341_counts-pos.pattern_4.n_42-vs-ZNF341-203.alignment counts-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-203/Hughes_GR_models_ZNF341_counts-pos.pattern_5.n_37-vs-ZNF341-203.alignment counts-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-203/Hughes_GR_models_ZNF341_counts-pos.pattern_6.n_32-vs-ZNF341-203.alignment counts-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-203/Hughes_GR_models_ZNF341_counts-pos.pattern_7.n_30-vs-ZNF341-203.alignment counts-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-203/Hughes_GR_models_ZNF341_counts-pos.pattern_8.n_27-vs-ZNF341-203.alignment counts-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-203/Hughes_GR_models_ZNF341_counts-pos.pattern_9.n_23-vs-ZNF341-203.alignment counts-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_counts_pattern_0.n_12298-vs-ZNF341-203.alignment counts-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_counts_pattern_10.n_66-vs-ZNF341-203.alignment counts-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_counts_pattern_11.n_59-vs-ZNF341-203.alignment counts-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_counts_pattern_12.n_46-vs-ZNF341-203.alignment counts-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_counts_pattern_13.n_45-vs-ZNF341-203.alignment counts-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_counts_pattern_14.n_45-vs-ZNF341-203.alignment counts-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_counts_pattern_15.n_43-vs-ZNF341-203.alignment counts-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_counts_pattern_16.n_43-vs-ZNF341-203.alignment counts-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_counts_pattern_17.n_37-vs-ZNF341-203.alignment counts-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_counts_pattern_18.n_30-vs-ZNF341-203.alignment counts-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_counts_pattern_19.n_23-vs-ZNF341-203.alignment counts-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_counts_pattern_1.n_6960-vs-ZNF341-203.alignment counts-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_counts_pattern_2.n_2255-vs-ZNF341-203.alignment counts-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_counts_pattern_3.n_1035-vs-ZNF341-203.alignment counts-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_counts_pattern_4.n_300-vs-ZNF341-203.alignment counts-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_counts_pattern_5.n_130-vs-ZNF341-203.alignment counts-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_counts_pattern_6.n_110-vs-ZNF341-203.alignment counts-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_counts_pattern_7.n_108-vs-ZNF341-203.alignment counts-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_counts_pattern_8.n_102-vs-ZNF341-203.alignment counts-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_counts_pattern_9.n_75-vs-ZNF341-203.alignment counts-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-204/Hughes_GR_models_ZNF341_counts-pos.pattern_0.n_4323-vs-ZNF341-204.alignment counts-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-204/Hughes_GR_models_ZNF341_counts-pos.pattern_10.n_21-vs-ZNF341-204.alignment counts-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-204/Hughes_GR_models_ZNF341_counts-pos.pattern_1.n_1629-vs-ZNF341-204.alignment counts-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-204/Hughes_GR_models_ZNF341_counts-pos.pattern_2.n_311-vs-ZNF341-204.alignment counts-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-204/Hughes_GR_models_ZNF341_counts-pos.pattern_3.n_59-vs-ZNF341-204.alignment counts-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-204/Hughes_GR_models_ZNF341_counts-pos.pattern_4.n_42-vs-ZNF341-204.alignment counts-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-204/Hughes_GR_models_ZNF341_counts-pos.pattern_5.n_37-vs-ZNF341-204.alignment counts-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-204/Hughes_GR_models_ZNF341_counts-pos.pattern_6.n_32-vs-ZNF341-204.alignment counts-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-204/Hughes_GR_models_ZNF341_counts-pos.pattern_7.n_30-vs-ZNF341-204.alignment counts-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-204/Hughes_GR_models_ZNF341_counts-pos.pattern_8.n_27-vs-ZNF341-204.alignment counts-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-204/Hughes_GR_models_ZNF341_counts-pos.pattern_9.n_23-vs-ZNF341-204.alignment counts-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_counts_pattern_0.n_12298-vs-ZNF341-204.alignment counts-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_counts_pattern_10.n_66-vs-ZNF341-204.alignment counts-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_counts_pattern_11.n_59-vs-ZNF341-204.alignment counts-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_counts_pattern_12.n_46-vs-ZNF341-204.alignment counts-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_counts_pattern_13.n_45-vs-ZNF341-204.alignment counts-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_counts_pattern_14.n_45-vs-ZNF341-204.alignment counts-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_counts_pattern_15.n_43-vs-ZNF341-204.alignment counts-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_counts_pattern_16.n_43-vs-ZNF341-204.alignment counts-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_counts_pattern_17.n_37-vs-ZNF341-204.alignment counts-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_counts_pattern_18.n_30-vs-ZNF341-204.alignment counts-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_counts_pattern_19.n_23-vs-ZNF341-204.alignment counts-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_counts_pattern_1.n_6960-vs-ZNF341-204.alignment counts-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_counts_pattern_2.n_2255-vs-ZNF341-204.alignment counts-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_counts_pattern_3.n_1035-vs-ZNF341-204.alignment counts-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_counts_pattern_4.n_300-vs-ZNF341-204.alignment counts-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_counts_pattern_5.n_130-vs-ZNF341-204.alignment counts-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_counts_pattern_6.n_110-vs-ZNF341-204.alignment counts-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_counts_pattern_7.n_108-vs-ZNF341-204.alignment counts-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_counts_pattern_8.n_102-vs-ZNF341-204.alignment counts-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_counts_pattern_9.n_75-vs-ZNF341-204.alignment counts-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF34-201/Hughes_GR_models_ZNF34_counts-neg.pattern_0.n_32-vs-ZNF34-201.alignment counts-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF34-201/Hughes_GR_models_ZNF34_counts-neg.pattern_1.n_29-vs-ZNF34-201.alignment counts-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF34-201/Hughes_GR_models_ZNF34_counts-pos.pattern_0.n_26-vs-ZNF34-201.alignment counts-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF34-201/Hughes_GR_models_ZNF34_counts-pos.pattern_1.n_25-vs-ZNF34-201.alignment counts-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF34-201/Hughes_GR_models_ZNF34_counts-pos.pattern_2.n_25-vs-ZNF34-201.alignment counts-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF34-201/Hughes_GR_models_ZNF34_counts-pos.pattern_3.n_24-vs-ZNF34-201.alignment counts-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF34-201/Hughes_GR_models_ZNF34_counts-pos.pattern_4.n_24-vs-ZNF34-201.alignment counts-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF34-201/neg_patterns.ENCSR904JEY_ChIP_ZNF34_HepG2_ENCSR737MQL_counts_pattern_0.n_38-vs-ZNF34-201.alignment counts-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF34-201/neg_patterns.ENCSR904JEY_ChIP_ZNF34_HepG2_ENCSR737MQL_counts_pattern_1.n_34-vs-ZNF34-201.alignment counts-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF34-201/neg_patterns.ENCSR904JEY_ChIP_ZNF34_HepG2_ENCSR737MQL_counts_pattern_2.n_33-vs-ZNF34-201.alignment counts-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF34-201/pos_patterns.ENCSR727PIC_ChIP_ZNF34_HEK293_ENCSR976JEH_counts_pattern_0.n_8508-vs-ZNF34-201.alignment counts-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF34-201/pos_patterns.ENCSR727PIC_ChIP_ZNF34_HEK293_ENCSR976JEH_counts_pattern_1.n_333-vs-ZNF34-201.alignment counts-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF34-201/pos_patterns.ENCSR727PIC_ChIP_ZNF34_HEK293_ENCSR976JEH_counts_pattern_2.n_84-vs-ZNF34-201.alignment counts-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF34-201/pos_patterns.ENCSR904JEY_ChIP_ZNF34_HepG2_ENCSR737MQL_counts_pattern_0.n_1829-vs-ZNF34-201.alignment counts-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF34-201/pos_patterns.ENCSR904JEY_ChIP_ZNF34_HepG2_ENCSR737MQL_counts_pattern_10.n_275-vs-ZNF34-201.alignment counts-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF34-201/pos_patterns.ENCSR904JEY_ChIP_ZNF34_HepG2_ENCSR737MQL_counts_pattern_11.n_275-vs-ZNF34-201.alignment counts-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF34-201/pos_patterns.ENCSR904JEY_ChIP_ZNF34_HepG2_ENCSR737MQL_counts_pattern_12.n_262-vs-ZNF34-201.alignment counts-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF34-201/pos_patterns.ENCSR904JEY_ChIP_ZNF34_HepG2_ENCSR737MQL_counts_pattern_13.n_244-vs-ZNF34-201.alignment counts-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF34-201/pos_patterns.ENCSR904JEY_ChIP_ZNF34_HepG2_ENCSR737MQL_counts_pattern_14.n_219-vs-ZNF34-201.alignment counts-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF34-201/pos_patterns.ENCSR904JEY_ChIP_ZNF34_HepG2_ENCSR737MQL_counts_pattern_15.n_198-vs-ZNF34-201.alignment counts-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF34-201/pos_patterns.ENCSR904JEY_ChIP_ZNF34_HepG2_ENCSR737MQL_counts_pattern_16.n_187-vs-ZNF34-201.alignment counts-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF34-201/pos_patterns.ENCSR904JEY_ChIP_ZNF34_HepG2_ENCSR737MQL_counts_pattern_17.n_181-vs-ZNF34-201.alignment counts-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF34-201/pos_patterns.ENCSR904JEY_ChIP_ZNF34_HepG2_ENCSR737MQL_counts_pattern_18.n_178-vs-ZNF34-201.alignment counts-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF34-201/pos_patterns.ENCSR904JEY_ChIP_ZNF34_HepG2_ENCSR737MQL_counts_pattern_19.n_153-vs-ZNF34-201.alignment counts-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF34-201/pos_patterns.ENCSR904JEY_ChIP_ZNF34_HepG2_ENCSR737MQL_counts_pattern_1.n_1198-vs-ZNF34-201.alignment counts-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF34-201/pos_patterns.ENCSR904JEY_ChIP_ZNF34_HepG2_ENCSR737MQL_counts_pattern_20.n_149-vs-ZNF34-201.alignment counts-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF34-201/pos_patterns.ENCSR904JEY_ChIP_ZNF34_HepG2_ENCSR737MQL_counts_pattern_21.n_87-vs-ZNF34-201.alignment counts-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF34-201/pos_patterns.ENCSR904JEY_ChIP_ZNF34_HepG2_ENCSR737MQL_counts_pattern_22.n_65-vs-ZNF34-201.alignment counts-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF34-201/pos_patterns.ENCSR904JEY_ChIP_ZNF34_HepG2_ENCSR737MQL_counts_pattern_23.n_43-vs-ZNF34-201.alignment counts-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF34-201/pos_patterns.ENCSR904JEY_ChIP_ZNF34_HepG2_ENCSR737MQL_counts_pattern_2.n_818-vs-ZNF34-201.alignment counts-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF34-201/pos_patterns.ENCSR904JEY_ChIP_ZNF34_HepG2_ENCSR737MQL_counts_pattern_3.n_528-vs-ZNF34-201.alignment counts-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF34-201/pos_patterns.ENCSR904JEY_ChIP_ZNF34_HepG2_ENCSR737MQL_counts_pattern_4.n_527-vs-ZNF34-201.alignment counts-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF34-201/pos_patterns.ENCSR904JEY_ChIP_ZNF34_HepG2_ENCSR737MQL_counts_pattern_5.n_438-vs-ZNF34-201.alignment counts-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF34-201/pos_patterns.ENCSR904JEY_ChIP_ZNF34_HepG2_ENCSR737MQL_counts_pattern_6.n_349-vs-ZNF34-201.alignment counts-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF34-201/pos_patterns.ENCSR904JEY_ChIP_ZNF34_HepG2_ENCSR737MQL_counts_pattern_7.n_311-vs-ZNF34-201.alignment counts-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF34-201/pos_patterns.ENCSR904JEY_ChIP_ZNF34_HepG2_ENCSR737MQL_counts_pattern_8.n_296-vs-ZNF34-201.alignment counts-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF34-201/pos_patterns.ENCSR904JEY_ChIP_ZNF34_HepG2_ENCSR737MQL_counts_pattern_9.n_292-vs-ZNF34-201.alignment counts-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF343-201/ChipExo_models_ZNF343_counts-pos.pattern_0.n_3051-vs-ZNF343-201.alignment counts-znf_b1h_alignment/ZNF343-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF343-201/ChipExo_models_ZNF343_counts-pos.pattern_1.n_41-vs-ZNF343-201.alignment counts-znf_b1h_alignment/ZNF343-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF343-201/neg_patterns.ENCSR938VRO_ChIP_ZNF343_HepG2_ENCSR935PIN_counts_pattern_0.n_32-vs-ZNF343-201.alignment counts-znf_b1h_alignment/ZNF343-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF343-201/neg_patterns.ENCSR938VRO_ChIP_ZNF343_HepG2_ENCSR935PIN_counts_pattern_1.n_28-vs-ZNF343-201.alignment counts-znf_b1h_alignment/ZNF343-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF343-201/pos_patterns.ENCSR938VRO_ChIP_ZNF343_HepG2_ENCSR935PIN_counts_pattern_0.n_2576-vs-ZNF343-201.alignment counts-znf_b1h_alignment/ZNF343-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF343-201/pos_patterns.ENCSR938VRO_ChIP_ZNF343_HepG2_ENCSR935PIN_counts_pattern_10.n_158-vs-ZNF343-201.alignment counts-znf_b1h_alignment/ZNF343-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF343-201/pos_patterns.ENCSR938VRO_ChIP_ZNF343_HepG2_ENCSR935PIN_counts_pattern_11.n_147-vs-ZNF343-201.alignment counts-znf_b1h_alignment/ZNF343-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF343-201/pos_patterns.ENCSR938VRO_ChIP_ZNF343_HepG2_ENCSR935PIN_counts_pattern_12.n_70-vs-ZNF343-201.alignment counts-znf_b1h_alignment/ZNF343-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF343-201/pos_patterns.ENCSR938VRO_ChIP_ZNF343_HepG2_ENCSR935PIN_counts_pattern_13.n_53-vs-ZNF343-201.alignment counts-znf_b1h_alignment/ZNF343-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF343-201/pos_patterns.ENCSR938VRO_ChIP_ZNF343_HepG2_ENCSR935PIN_counts_pattern_14.n_32-vs-ZNF343-201.alignment counts-znf_b1h_alignment/ZNF343-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF343-201/pos_patterns.ENCSR938VRO_ChIP_ZNF343_HepG2_ENCSR935PIN_counts_pattern_15.n_20-vs-ZNF343-201.alignment counts-znf_b1h_alignment/ZNF343-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF343-201/pos_patterns.ENCSR938VRO_ChIP_ZNF343_HepG2_ENCSR935PIN_counts_pattern_16.n_20-vs-ZNF343-201.alignment counts-znf_b1h_alignment/ZNF343-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF343-201/pos_patterns.ENCSR938VRO_ChIP_ZNF343_HepG2_ENCSR935PIN_counts_pattern_1.n_2031-vs-ZNF343-201.alignment counts-znf_b1h_alignment/ZNF343-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF343-201/pos_patterns.ENCSR938VRO_ChIP_ZNF343_HepG2_ENCSR935PIN_counts_pattern_2.n_1609-vs-ZNF343-201.alignment counts-znf_b1h_alignment/ZNF343-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF343-201/pos_patterns.ENCSR938VRO_ChIP_ZNF343_HepG2_ENCSR935PIN_counts_pattern_3.n_1552-vs-ZNF343-201.alignment counts-znf_b1h_alignment/ZNF343-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF343-201/pos_patterns.ENCSR938VRO_ChIP_ZNF343_HepG2_ENCSR935PIN_counts_pattern_4.n_1054-vs-ZNF343-201.alignment counts-znf_b1h_alignment/ZNF343-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF343-201/pos_patterns.ENCSR938VRO_ChIP_ZNF343_HepG2_ENCSR935PIN_counts_pattern_5.n_824-vs-ZNF343-201.alignment counts-znf_b1h_alignment/ZNF343-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF343-201/pos_patterns.ENCSR938VRO_ChIP_ZNF343_HepG2_ENCSR935PIN_counts_pattern_6.n_586-vs-ZNF343-201.alignment counts-znf_b1h_alignment/ZNF343-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF343-201/pos_patterns.ENCSR938VRO_ChIP_ZNF343_HepG2_ENCSR935PIN_counts_pattern_7.n_517-vs-ZNF343-201.alignment counts-znf_b1h_alignment/ZNF343-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF343-201/pos_patterns.ENCSR938VRO_ChIP_ZNF343_HepG2_ENCSR935PIN_counts_pattern_8.n_252-vs-ZNF343-201.alignment counts-znf_b1h_alignment/ZNF343-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF343-201/pos_patterns.ENCSR938VRO_ChIP_ZNF343_HepG2_ENCSR935PIN_counts_pattern_9.n_202-vs-ZNF343-201.alignment counts-znf_b1h_alignment/ZNF343-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF347-201/pos_patterns.ENCSR590FLL_ChIP_ZNF347_K562_ENCSR142MCA_counts_pattern_0.n_70-vs-ZNF347-201.alignment counts-znf_b1h_alignment/ZNF347-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF347-201/pos_patterns.ENCSR590FLL_ChIP_ZNF347_K562_ENCSR142MCA_counts_pattern_1.n_65-vs-ZNF347-201.alignment counts-znf_b1h_alignment/ZNF347-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF347-201/pos_patterns.ENCSR590FLL_ChIP_ZNF347_K562_ENCSR142MCA_counts_pattern_2.n_61-vs-ZNF347-201.alignment counts-znf_b1h_alignment/ZNF347-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF347-201/pos_patterns.ENCSR590FLL_ChIP_ZNF347_K562_ENCSR142MCA_counts_pattern_3.n_47-vs-ZNF347-201.alignment counts-znf_b1h_alignment/ZNF347-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF347-201/pos_patterns.ENCSR590FLL_ChIP_ZNF347_K562_ENCSR142MCA_counts_pattern_4.n_42-vs-ZNF347-201.alignment counts-znf_b1h_alignment/ZNF347-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF347-201/pos_patterns.ENCSR590FLL_ChIP_ZNF347_K562_ENCSR142MCA_counts_pattern_5.n_29-vs-ZNF347-201.alignment counts-znf_b1h_alignment/ZNF347-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF347-201/pos_patterns.ENCSR590FLL_ChIP_ZNF347_K562_ENCSR142MCA_counts_pattern_6.n_24-vs-ZNF347-201.alignment counts-znf_b1h_alignment/ZNF347-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF350-201/Hughes_GR_models_ZNF350_counts-pos.pattern_0.n_1586-vs-ZNF350-201.alignment counts-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF350-201/neg_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_counts_pattern_0.n_42-vs-ZNF350-201.alignment counts-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF350-201/neg_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_counts_pattern_1.n_32-vs-ZNF350-201.alignment counts-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF350-201/neg_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_counts_pattern_2.n_23-vs-ZNF350-201.alignment counts-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF350-201/neg_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_counts_pattern_3.n_23-vs-ZNF350-201.alignment counts-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF350-201/neg_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_counts_pattern_4.n_21-vs-ZNF350-201.alignment counts-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_counts_pattern_0.n_3665-vs-ZNF350-201.alignment counts-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_counts_pattern_10.n_298-vs-ZNF350-201.alignment counts-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_counts_pattern_11.n_283-vs-ZNF350-201.alignment counts-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_counts_pattern_12.n_255-vs-ZNF350-201.alignment counts-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_counts_pattern_13.n_204-vs-ZNF350-201.alignment counts-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_counts_pattern_14.n_196-vs-ZNF350-201.alignment counts-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_counts_pattern_15.n_178-vs-ZNF350-201.alignment counts-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_counts_pattern_16.n_169-vs-ZNF350-201.alignment counts-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_counts_pattern_17.n_144-vs-ZNF350-201.alignment counts-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_counts_pattern_18.n_113-vs-ZNF350-201.alignment counts-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_counts_pattern_19.n_63-vs-ZNF350-201.alignment counts-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_counts_pattern_1.n_2389-vs-ZNF350-201.alignment counts-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_counts_pattern_20.n_58-vs-ZNF350-201.alignment counts-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_counts_pattern_21.n_20-vs-ZNF350-201.alignment counts-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_counts_pattern_2.n_2158-vs-ZNF350-201.alignment counts-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_counts_pattern_3.n_1947-vs-ZNF350-201.alignment counts-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_counts_pattern_4.n_1591-vs-ZNF350-201.alignment counts-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_counts_pattern_5.n_1345-vs-ZNF350-201.alignment counts-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_counts_pattern_6.n_1305-vs-ZNF350-201.alignment counts-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_counts_pattern_7.n_916-vs-ZNF350-201.alignment counts-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_counts_pattern_8.n_496-vs-ZNF350-201.alignment counts-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_counts_pattern_9.n_314-vs-ZNF350-201.alignment counts-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR854ORP_ChIP_ZNF350_HEK293_ENCSR057YRV_counts_pattern_0.n_534-vs-ZNF350-201.alignment counts-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR854ORP_ChIP_ZNF350_HEK293_ENCSR057YRV_counts_pattern_1.n_444-vs-ZNF350-201.alignment counts-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF35-201/Hughes_GR_models_ZNF35_counts-pos.pattern_0.n_2520-vs-ZNF35-201.alignment counts-znf_b1h_alignment/ZNF35-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF35-201/Hughes_GR_models_ZNF35_counts-pos.pattern_1.n_1877-vs-ZNF35-201.alignment counts-znf_b1h_alignment/ZNF35-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF35-201/Hughes_GR_models_ZNF35_counts-pos.pattern_2.n_1460-vs-ZNF35-201.alignment counts-znf_b1h_alignment/ZNF35-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF35-201/Hughes_GR_models_ZNF35_counts-pos.pattern_3.n_634-vs-ZNF35-201.alignment counts-znf_b1h_alignment/ZNF35-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF35-201/Hughes_GR_models_ZNF35_counts-pos.pattern_4.n_613-vs-ZNF35-201.alignment counts-znf_b1h_alignment/ZNF35-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF35-201/Hughes_GR_models_ZNF35_counts-pos.pattern_5.n_485-vs-ZNF35-201.alignment counts-znf_b1h_alignment/ZNF35-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF35-201/Hughes_GR_models_ZNF35_counts-pos.pattern_6.n_121-vs-ZNF35-201.alignment counts-znf_b1h_alignment/ZNF35-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF35-201/Hughes_GR_models_ZNF35_counts-pos.pattern_7.n_57-vs-ZNF35-201.alignment counts-znf_b1h_alignment/ZNF35-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF35-201/Hughes_NB_models_ZNF35_counts-pos.pattern_0.n_457-vs-ZNF35-201.alignment counts-znf_b1h_alignment/ZNF35-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF35-201/Hughes_NB_models_ZNF35_counts-pos.pattern_10.n_53-vs-ZNF35-201.alignment counts-znf_b1h_alignment/ZNF35-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF35-201/Hughes_NB_models_ZNF35_counts-pos.pattern_11.n_47-vs-ZNF35-201.alignment counts-znf_b1h_alignment/ZNF35-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF35-201/Hughes_NB_models_ZNF35_counts-pos.pattern_1.n_240-vs-ZNF35-201.alignment counts-znf_b1h_alignment/ZNF35-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF35-201/Hughes_NB_models_ZNF35_counts-pos.pattern_2.n_199-vs-ZNF35-201.alignment counts-znf_b1h_alignment/ZNF35-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF35-201/Hughes_NB_models_ZNF35_counts-pos.pattern_3.n_125-vs-ZNF35-201.alignment counts-znf_b1h_alignment/ZNF35-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF35-201/Hughes_NB_models_ZNF35_counts-pos.pattern_4.n_122-vs-ZNF35-201.alignment counts-znf_b1h_alignment/ZNF35-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-201/pos_patterns.ENCSR124QQJ_ChIP_ZNF354B_HepG2_ENCSR040RYM_counts_pattern_19.n_96-vs-ZNF354B-201.alignment counts-znf_b1h_alignment/ZNF354B-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-201/pos_patterns.ENCSR124QQJ_ChIP_ZNF354B_HepG2_ENCSR040RYM_counts_pattern_22.n_76-vs-ZNF354B-201.alignment counts-znf_b1h_alignment/ZNF354B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-201/pos_patterns.ENCSR124QQJ_ChIP_ZNF354B_HepG2_ENCSR040RYM_counts_pattern_23.n_54-vs-ZNF354B-201.alignment counts-znf_b1h_alignment/ZNF354B-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-201/pos_patterns.ENCSR124QQJ_ChIP_ZNF354B_HepG2_ENCSR040RYM_counts_pattern_25.n_50-vs-ZNF354B-201.alignment counts-znf_b1h_alignment/ZNF354B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-201/pos_patterns.ENCSR124QQJ_ChIP_ZNF354B_HepG2_ENCSR040RYM_counts_pattern_26.n_31-vs-ZNF354B-201.alignment counts-znf_b1h_alignment/ZNF354B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-201/pos_patterns.ENCSR124QQJ_ChIP_ZNF354B_HepG2_ENCSR040RYM_counts_pattern_2.n_537-vs-ZNF354B-201.alignment counts-znf_b1h_alignment/ZNF354B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-201/pos_patterns.ENCSR124QQJ_ChIP_ZNF354B_HepG2_ENCSR040RYM_counts_pattern_3.n_463-vs-ZNF354B-201.alignment counts-znf_b1h_alignment/ZNF354B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-201/pos_patterns.ENCSR124QQJ_ChIP_ZNF354B_HepG2_ENCSR040RYM_counts_pattern_4.n_446-vs-ZNF354B-201.alignment counts-znf_b1h_alignment/ZNF354B-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-201/pos_patterns.ENCSR674SCQ_ChIP_ZNF354B_K562_ENCSR079UHU_counts_pattern_0.n_1499-vs-ZNF354B-201.alignment counts-znf_b1h_alignment/ZNF354B-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-201/pos_patterns.ENCSR674SCQ_ChIP_ZNF354B_K562_ENCSR079UHU_counts_pattern_3.n_80-vs-ZNF354B-201.alignment counts-znf_b1h_alignment/ZNF354B-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-204/ChipExo_models_ZNF354B_counts-pos.pattern_0.n_128-vs-ZNF354B-204.alignment counts-znf_b1h_alignment/ZNF354B-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-204/neg_patterns.ENCSR124QQJ_ChIP_ZNF354B_HepG2_ENCSR040RYM_counts_pattern_0.n_42-vs-ZNF354B-204.alignment counts-znf_b1h_alignment/ZNF354B-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-204/pos_patterns.ENCSR044IXA_ChIP_ZNF354B_K562_ENCSR315IUB_counts_pattern_0.n_795-vs-ZNF354B-204.alignment counts-znf_b1h_alignment/ZNF354B-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-204/pos_patterns.ENCSR044IXA_ChIP_ZNF354B_K562_ENCSR315IUB_counts_pattern_1.n_785-vs-ZNF354B-204.alignment counts-znf_b1h_alignment/ZNF354B-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-204/pos_patterns.ENCSR044IXA_ChIP_ZNF354B_K562_ENCSR315IUB_counts_pattern_2.n_42-vs-ZNF354B-204.alignment counts-znf_b1h_alignment/ZNF354B-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-204/pos_patterns.ENCSR124QQJ_ChIP_ZNF354B_HepG2_ENCSR040RYM_counts_pattern_0.n_903-vs-ZNF354B-204.alignment counts-znf_b1h_alignment/ZNF354B-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-204/pos_patterns.ENCSR124QQJ_ChIP_ZNF354B_HepG2_ENCSR040RYM_counts_pattern_10.n_178-vs-ZNF354B-204.alignment counts-znf_b1h_alignment/ZNF354B-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-204/pos_patterns.ENCSR124QQJ_ChIP_ZNF354B_HepG2_ENCSR040RYM_counts_pattern_11.n_172-vs-ZNF354B-204.alignment counts-znf_b1h_alignment/ZNF354B-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-204/pos_patterns.ENCSR124QQJ_ChIP_ZNF354B_HepG2_ENCSR040RYM_counts_pattern_12.n_162-vs-ZNF354B-204.alignment counts-znf_b1h_alignment/ZNF354B-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-204/pos_patterns.ENCSR124QQJ_ChIP_ZNF354B_HepG2_ENCSR040RYM_counts_pattern_13.n_156-vs-ZNF354B-204.alignment counts-znf_b1h_alignment/ZNF354B-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-204/pos_patterns.ENCSR124QQJ_ChIP_ZNF354B_HepG2_ENCSR040RYM_counts_pattern_14.n_147-vs-ZNF354B-204.alignment counts-znf_b1h_alignment/ZNF354B-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-204/pos_patterns.ENCSR124QQJ_ChIP_ZNF354B_HepG2_ENCSR040RYM_counts_pattern_15.n_143-vs-ZNF354B-204.alignment counts-znf_b1h_alignment/ZNF354B-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-204/pos_patterns.ENCSR124QQJ_ChIP_ZNF354B_HepG2_ENCSR040RYM_counts_pattern_16.n_132-vs-ZNF354B-204.alignment counts-znf_b1h_alignment/ZNF354B-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-204/pos_patterns.ENCSR124QQJ_ChIP_ZNF354B_HepG2_ENCSR040RYM_counts_pattern_17.n_111-vs-ZNF354B-204.alignment counts-znf_b1h_alignment/ZNF354B-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-204/pos_patterns.ENCSR124QQJ_ChIP_ZNF354B_HepG2_ENCSR040RYM_counts_pattern_18.n_99-vs-ZNF354B-204.alignment counts-znf_b1h_alignment/ZNF354B-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-204/pos_patterns.ENCSR124QQJ_ChIP_ZNF354B_HepG2_ENCSR040RYM_counts_pattern_19.n_96-vs-ZNF354B-204.alignment counts-znf_b1h_alignment/ZNF354B-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-204/pos_patterns.ENCSR124QQJ_ChIP_ZNF354B_HepG2_ENCSR040RYM_counts_pattern_1.n_722-vs-ZNF354B-204.alignment counts-znf_b1h_alignment/ZNF354B-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-204/pos_patterns.ENCSR124QQJ_ChIP_ZNF354B_HepG2_ENCSR040RYM_counts_pattern_20.n_88-vs-ZNF354B-204.alignment counts-znf_b1h_alignment/ZNF354B-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-204/pos_patterns.ENCSR124QQJ_ChIP_ZNF354B_HepG2_ENCSR040RYM_counts_pattern_21.n_78-vs-ZNF354B-204.alignment counts-znf_b1h_alignment/ZNF354B-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-204/pos_patterns.ENCSR124QQJ_ChIP_ZNF354B_HepG2_ENCSR040RYM_counts_pattern_22.n_76-vs-ZNF354B-204.alignment counts-znf_b1h_alignment/ZNF354B-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-204/pos_patterns.ENCSR124QQJ_ChIP_ZNF354B_HepG2_ENCSR040RYM_counts_pattern_23.n_54-vs-ZNF354B-204.alignment counts-znf_b1h_alignment/ZNF354B-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-204/pos_patterns.ENCSR124QQJ_ChIP_ZNF354B_HepG2_ENCSR040RYM_counts_pattern_24.n_50-vs-ZNF354B-204.alignment counts-znf_b1h_alignment/ZNF354B-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-204/pos_patterns.ENCSR124QQJ_ChIP_ZNF354B_HepG2_ENCSR040RYM_counts_pattern_25.n_50-vs-ZNF354B-204.alignment counts-znf_b1h_alignment/ZNF354B-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-204/pos_patterns.ENCSR124QQJ_ChIP_ZNF354B_HepG2_ENCSR040RYM_counts_pattern_26.n_31-vs-ZNF354B-204.alignment counts-znf_b1h_alignment/ZNF354B-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-204/pos_patterns.ENCSR124QQJ_ChIP_ZNF354B_HepG2_ENCSR040RYM_counts_pattern_2.n_537-vs-ZNF354B-204.alignment counts-znf_b1h_alignment/ZNF354B-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-204/pos_patterns.ENCSR124QQJ_ChIP_ZNF354B_HepG2_ENCSR040RYM_counts_pattern_3.n_463-vs-ZNF354B-204.alignment counts-znf_b1h_alignment/ZNF354B-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-204/pos_patterns.ENCSR124QQJ_ChIP_ZNF354B_HepG2_ENCSR040RYM_counts_pattern_4.n_446-vs-ZNF354B-204.alignment counts-znf_b1h_alignment/ZNF354B-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-204/pos_patterns.ENCSR124QQJ_ChIP_ZNF354B_HepG2_ENCSR040RYM_counts_pattern_5.n_393-vs-ZNF354B-204.alignment counts-znf_b1h_alignment/ZNF354B-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-204/pos_patterns.ENCSR124QQJ_ChIP_ZNF354B_HepG2_ENCSR040RYM_counts_pattern_6.n_319-vs-ZNF354B-204.alignment counts-znf_b1h_alignment/ZNF354B-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-204/pos_patterns.ENCSR124QQJ_ChIP_ZNF354B_HepG2_ENCSR040RYM_counts_pattern_7.n_293-vs-ZNF354B-204.alignment counts-znf_b1h_alignment/ZNF354B-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-204/pos_patterns.ENCSR124QQJ_ChIP_ZNF354B_HepG2_ENCSR040RYM_counts_pattern_8.n_219-vs-ZNF354B-204.alignment counts-znf_b1h_alignment/ZNF354B-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-204/pos_patterns.ENCSR124QQJ_ChIP_ZNF354B_HepG2_ENCSR040RYM_counts_pattern_9.n_188-vs-ZNF354B-204.alignment counts-znf_b1h_alignment/ZNF354B-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-204/pos_patterns.ENCSR674SCQ_ChIP_ZNF354B_K562_ENCSR079UHU_counts_pattern_0.n_1499-vs-ZNF354B-204.alignment counts-znf_b1h_alignment/ZNF354B-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-204/pos_patterns.ENCSR674SCQ_ChIP_ZNF354B_K562_ENCSR079UHU_counts_pattern_1.n_512-vs-ZNF354B-204.alignment counts-znf_b1h_alignment/ZNF354B-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-204/pos_patterns.ENCSR674SCQ_ChIP_ZNF354B_K562_ENCSR079UHU_counts_pattern_2.n_477-vs-ZNF354B-204.alignment counts-znf_b1h_alignment/ZNF354B-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-204/pos_patterns.ENCSR674SCQ_ChIP_ZNF354B_K562_ENCSR079UHU_counts_pattern_3.n_80-vs-ZNF354B-204.alignment counts-znf_b1h_alignment/ZNF354B-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-204/pos_patterns.ENCSR674SCQ_ChIP_ZNF354B_K562_ENCSR079UHU_counts_pattern_4.n_63-vs-ZNF354B-204.alignment counts-znf_b1h_alignment/ZNF354B-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354B-204/pos_patterns.ENCSR674SCQ_ChIP_ZNF354B_K562_ENCSR079UHU_counts_pattern_5.n_22-vs-ZNF354B-204.alignment counts-znf_b1h_alignment/ZNF354B-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354C-201/pos_patterns.ENCSR289NSN_ChIP_ZNF354C_HEK293_ENCSR377IWV_counts_pattern_0.n_1327-vs-ZNF354C-201.alignment counts-znf_b1h_alignment/ZNF354C-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354C-201/pos_patterns.ENCSR289NSN_ChIP_ZNF354C_HEK293_ENCSR377IWV_counts_pattern_1.n_78-vs-ZNF354C-201.alignment counts-znf_b1h_alignment/ZNF354C-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354C-201/pos_patterns.ENCSR289NSN_ChIP_ZNF354C_HEK293_ENCSR377IWV_counts_pattern_2.n_33-vs-ZNF354C-201.alignment counts-znf_b1h_alignment/ZNF354C-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354C-201/pos_patterns.ENCSR506SSQ_ChIP_ZNF354C_K562_ENCSR664CJG_counts_pattern_0.n_8284-vs-ZNF354C-201.alignment counts-znf_b1h_alignment/ZNF354C-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354C-201/pos_patterns.ENCSR506SSQ_ChIP_ZNF354C_K562_ENCSR664CJG_counts_pattern_10.n_28-vs-ZNF354C-201.alignment counts-znf_b1h_alignment/ZNF354C-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354C-201/pos_patterns.ENCSR506SSQ_ChIP_ZNF354C_K562_ENCSR664CJG_counts_pattern_11.n_21-vs-ZNF354C-201.alignment counts-znf_b1h_alignment/ZNF354C-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354C-201/pos_patterns.ENCSR506SSQ_ChIP_ZNF354C_K562_ENCSR664CJG_counts_pattern_1.n_174-vs-ZNF354C-201.alignment counts-znf_b1h_alignment/ZNF354C-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354C-201/pos_patterns.ENCSR506SSQ_ChIP_ZNF354C_K562_ENCSR664CJG_counts_pattern_2.n_152-vs-ZNF354C-201.alignment counts-znf_b1h_alignment/ZNF354C-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354C-201/pos_patterns.ENCSR506SSQ_ChIP_ZNF354C_K562_ENCSR664CJG_counts_pattern_3.n_133-vs-ZNF354C-201.alignment counts-znf_b1h_alignment/ZNF354C-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354C-201/pos_patterns.ENCSR506SSQ_ChIP_ZNF354C_K562_ENCSR664CJG_counts_pattern_4.n_97-vs-ZNF354C-201.alignment counts-znf_b1h_alignment/ZNF354C-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354C-201/pos_patterns.ENCSR506SSQ_ChIP_ZNF354C_K562_ENCSR664CJG_counts_pattern_5.n_92-vs-ZNF354C-201.alignment counts-znf_b1h_alignment/ZNF354C-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354C-201/pos_patterns.ENCSR506SSQ_ChIP_ZNF354C_K562_ENCSR664CJG_counts_pattern_6.n_87-vs-ZNF354C-201.alignment counts-znf_b1h_alignment/ZNF354C-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354C-201/pos_patterns.ENCSR506SSQ_ChIP_ZNF354C_K562_ENCSR664CJG_counts_pattern_7.n_52-vs-ZNF354C-201.alignment counts-znf_b1h_alignment/ZNF354C-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354C-201/pos_patterns.ENCSR506SSQ_ChIP_ZNF354C_K562_ENCSR664CJG_counts_pattern_8.n_39-vs-ZNF354C-201.alignment counts-znf_b1h_alignment/ZNF354C-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF354C-201/pos_patterns.ENCSR506SSQ_ChIP_ZNF354C_K562_ENCSR664CJG_counts_pattern_9.n_37-vs-ZNF354C-201.alignment counts-znf_b1h_alignment/ZNF354C-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF367-201/pos_patterns.ENCSR048WVW_ChIP_ZNF367_HepG2_ENCSR388YVJ_counts_pattern_0.n_993-vs-ZNF367-201.alignment counts-znf_b1h_alignment/ZNF367-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF367-201/pos_patterns.ENCSR048WVW_ChIP_ZNF367_HepG2_ENCSR388YVJ_counts_pattern_10.n_54-vs-ZNF367-201.alignment counts-znf_b1h_alignment/ZNF367-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF367-201/pos_patterns.ENCSR048WVW_ChIP_ZNF367_HepG2_ENCSR388YVJ_counts_pattern_11.n_37-vs-ZNF367-201.alignment counts-znf_b1h_alignment/ZNF367-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF367-201/pos_patterns.ENCSR048WVW_ChIP_ZNF367_HepG2_ENCSR388YVJ_counts_pattern_1.n_986-vs-ZNF367-201.alignment counts-znf_b1h_alignment/ZNF367-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF367-201/pos_patterns.ENCSR048WVW_ChIP_ZNF367_HepG2_ENCSR388YVJ_counts_pattern_2.n_520-vs-ZNF367-201.alignment counts-znf_b1h_alignment/ZNF367-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF367-201/pos_patterns.ENCSR048WVW_ChIP_ZNF367_HepG2_ENCSR388YVJ_counts_pattern_3.n_281-vs-ZNF367-201.alignment counts-znf_b1h_alignment/ZNF367-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF367-201/pos_patterns.ENCSR048WVW_ChIP_ZNF367_HepG2_ENCSR388YVJ_counts_pattern_4.n_275-vs-ZNF367-201.alignment counts-znf_b1h_alignment/ZNF367-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF367-201/pos_patterns.ENCSR048WVW_ChIP_ZNF367_HepG2_ENCSR388YVJ_counts_pattern_5.n_165-vs-ZNF367-201.alignment counts-znf_b1h_alignment/ZNF367-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF367-201/pos_patterns.ENCSR048WVW_ChIP_ZNF367_HepG2_ENCSR388YVJ_counts_pattern_6.n_164-vs-ZNF367-201.alignment counts-znf_b1h_alignment/ZNF367-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF367-201/pos_patterns.ENCSR048WVW_ChIP_ZNF367_HepG2_ENCSR388YVJ_counts_pattern_7.n_119-vs-ZNF367-201.alignment counts-znf_b1h_alignment/ZNF367-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF367-201/pos_patterns.ENCSR048WVW_ChIP_ZNF367_HepG2_ENCSR388YVJ_counts_pattern_8.n_65-vs-ZNF367-201.alignment counts-znf_b1h_alignment/ZNF367-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF367-201/pos_patterns.ENCSR048WVW_ChIP_ZNF367_HepG2_ENCSR388YVJ_counts_pattern_9.n_57-vs-ZNF367-201.alignment counts-znf_b1h_alignment/ZNF367-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF37A-201/Hughes_GR_models_ZNF37A_counts-pos.pattern_0.n_227-vs-ZNF37A-201.alignment counts-znf_b1h_alignment/ZNF37A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF37A-201/pos_patterns.ENCSR371LLY_ChIP_ZNF37A_HEK293_ENCSR668MDE_counts_pattern_0.n_493-vs-ZNF37A-201.alignment counts-znf_b1h_alignment/ZNF37A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF37A-201/pos_patterns.ENCSR371LLY_ChIP_ZNF37A_HEK293_ENCSR668MDE_counts_pattern_1.n_433-vs-ZNF37A-201.alignment counts-znf_b1h_alignment/ZNF37A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF37A-201/pos_patterns.ENCSR371LLY_ChIP_ZNF37A_HEK293_ENCSR668MDE_counts_pattern_2.n_219-vs-ZNF37A-201.alignment counts-znf_b1h_alignment/ZNF37A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF37A-201/pos_patterns.ENCSR371LLY_ChIP_ZNF37A_HEK293_ENCSR668MDE_counts_pattern_3.n_187-vs-ZNF37A-201.alignment counts-znf_b1h_alignment/ZNF37A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF382-201/ChipExo_models_ZNF382_counts-pos.pattern_0.n_5971-vs-ZNF382-201.alignment counts-znf_b1h_alignment/ZNF382-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF382-201/ChipExo_models_ZNF382_counts-pos.pattern_1.n_2394-vs-ZNF382-201.alignment counts-znf_b1h_alignment/ZNF382-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF382-201/ChipExo_models_ZNF382_counts-pos.pattern_2.n_886-vs-ZNF382-201.alignment counts-znf_b1h_alignment/ZNF382-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF382-201/ChipExo_models_ZNF382_counts-pos.pattern_3.n_302-vs-ZNF382-201.alignment counts-znf_b1h_alignment/ZNF382-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF382-201/ChipExo_models_ZNF382_counts-pos.pattern_4.n_285-vs-ZNF382-201.alignment counts-znf_b1h_alignment/ZNF382-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF382-201/ChipExo_models_ZNF382_counts-pos.pattern_5.n_31-vs-ZNF382-201.alignment counts-znf_b1h_alignment/ZNF382-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF382-201/Hughes_GR_models_ZNF382_counts-pos.pattern_0.n_13616-vs-ZNF382-201.alignment counts-znf_b1h_alignment/ZNF382-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF382-201/Hughes_GR_models_ZNF382_counts-pos.pattern_10.n_49-vs-ZNF382-201.alignment counts-znf_b1h_alignment/ZNF382-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF382-201/Hughes_GR_models_ZNF382_counts-pos.pattern_11.n_27-vs-ZNF382-201.alignment counts-znf_b1h_alignment/ZNF382-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF382-201/Hughes_GR_models_ZNF382_counts-pos.pattern_1.n_3493-vs-ZNF382-201.alignment counts-znf_b1h_alignment/ZNF382-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF382-201/Hughes_GR_models_ZNF382_counts-pos.pattern_2.n_2800-vs-ZNF382-201.alignment counts-znf_b1h_alignment/ZNF382-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF382-201/Hughes_GR_models_ZNF382_counts-pos.pattern_3.n_1888-vs-ZNF382-201.alignment counts-znf_b1h_alignment/ZNF382-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF382-201/Hughes_GR_models_ZNF382_counts-pos.pattern_4.n_818-vs-ZNF382-201.alignment counts-znf_b1h_alignment/ZNF382-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF382-201/Hughes_GR_models_ZNF382_counts-pos.pattern_5.n_795-vs-ZNF382-201.alignment counts-znf_b1h_alignment/ZNF382-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF382-201/Hughes_GR_models_ZNF382_counts-pos.pattern_6.n_203-vs-ZNF382-201.alignment counts-znf_b1h_alignment/ZNF382-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF382-201/Hughes_GR_models_ZNF382_counts-pos.pattern_7.n_194-vs-ZNF382-201.alignment counts-znf_b1h_alignment/ZNF382-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF382-201/Hughes_GR_models_ZNF382_counts-pos.pattern_8.n_146-vs-ZNF382-201.alignment counts-znf_b1h_alignment/ZNF382-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF382-201/Hughes_GR_models_ZNF382_counts-pos.pattern_9.n_53-vs-ZNF382-201.alignment counts-znf_b1h_alignment/ZNF382-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF382-201/Hughes_NB_models_ZNF382_counts-pos.pattern_0.n_789-vs-ZNF382-201.alignment counts-znf_b1h_alignment/ZNF382-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF382-201/pos_patterns.ENCSR014HQD_ChIP_ZNF382_HepG2_ENCSR409FYD_counts_pattern_0.n_228-vs-ZNF382-201.alignment counts-znf_b1h_alignment/ZNF382-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF382-201/pos_patterns.ENCSR014HQD_ChIP_ZNF382_HepG2_ENCSR409FYD_counts_pattern_1.n_30-vs-ZNF382-201.alignment counts-znf_b1h_alignment/ZNF382-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF382-201/pos_patterns.ENCSR014HQD_ChIP_ZNF382_HepG2_ENCSR409FYD_counts_pattern_2.n_23-vs-ZNF382-201.alignment counts-znf_b1h_alignment/ZNF382-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF383-201/ChipExo_models_ZNF383_counts-pos.pattern_0.n_408-vs-ZNF383-201.alignment counts-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF383-201/ChipExo_models_ZNF383_counts-pos.pattern_1.n_265-vs-ZNF383-201.alignment counts-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF383-201/ChipExo_models_ZNF383_counts-pos.pattern_2.n_265-vs-ZNF383-201.alignment counts-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF383-201/ChipExo_models_ZNF383_counts-pos.pattern_3.n_145-vs-ZNF383-201.alignment counts-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF383-201/ChipExo_models_ZNF383_counts-pos.pattern_4.n_109-vs-ZNF383-201.alignment counts-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF383-201/ChipExo_models_ZNF383_counts-pos.pattern_5.n_20-vs-ZNF383-201.alignment counts-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF383-201/neg_patterns.ENCSR264LQX_ChIP_ZNF383_HepG2_ENCSR161OZI_counts_pattern_0.n_171-vs-ZNF383-201.alignment counts-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF383-201/neg_patterns.ENCSR264LQX_ChIP_ZNF383_HepG2_ENCSR161OZI_counts_pattern_1.n_158-vs-ZNF383-201.alignment counts-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF383-201/pos_patterns.ENCSR264LQX_ChIP_ZNF383_HepG2_ENCSR161OZI_counts_pattern_0.n_571-vs-ZNF383-201.alignment counts-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF383-201/pos_patterns.ENCSR264LQX_ChIP_ZNF383_HepG2_ENCSR161OZI_counts_pattern_10.n_194-vs-ZNF383-201.alignment counts-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF383-201/pos_patterns.ENCSR264LQX_ChIP_ZNF383_HepG2_ENCSR161OZI_counts_pattern_11.n_189-vs-ZNF383-201.alignment counts-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF383-201/pos_patterns.ENCSR264LQX_ChIP_ZNF383_HepG2_ENCSR161OZI_counts_pattern_12.n_175-vs-ZNF383-201.alignment counts-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF383-201/pos_patterns.ENCSR264LQX_ChIP_ZNF383_HepG2_ENCSR161OZI_counts_pattern_13.n_166-vs-ZNF383-201.alignment counts-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF383-201/pos_patterns.ENCSR264LQX_ChIP_ZNF383_HepG2_ENCSR161OZI_counts_pattern_14.n_165-vs-ZNF383-201.alignment counts-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF383-201/pos_patterns.ENCSR264LQX_ChIP_ZNF383_HepG2_ENCSR161OZI_counts_pattern_15.n_165-vs-ZNF383-201.alignment counts-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF383-201/pos_patterns.ENCSR264LQX_ChIP_ZNF383_HepG2_ENCSR161OZI_counts_pattern_16.n_154-vs-ZNF383-201.alignment counts-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF383-201/pos_patterns.ENCSR264LQX_ChIP_ZNF383_HepG2_ENCSR161OZI_counts_pattern_17.n_138-vs-ZNF383-201.alignment counts-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF383-201/pos_patterns.ENCSR264LQX_ChIP_ZNF383_HepG2_ENCSR161OZI_counts_pattern_18.n_132-vs-ZNF383-201.alignment counts-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF383-201/pos_patterns.ENCSR264LQX_ChIP_ZNF383_HepG2_ENCSR161OZI_counts_pattern_19.n_128-vs-ZNF383-201.alignment counts-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF383-201/pos_patterns.ENCSR264LQX_ChIP_ZNF383_HepG2_ENCSR161OZI_counts_pattern_1.n_418-vs-ZNF383-201.alignment counts-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF383-201/pos_patterns.ENCSR264LQX_ChIP_ZNF383_HepG2_ENCSR161OZI_counts_pattern_20.n_126-vs-ZNF383-201.alignment counts-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF383-201/pos_patterns.ENCSR264LQX_ChIP_ZNF383_HepG2_ENCSR161OZI_counts_pattern_21.n_124-vs-ZNF383-201.alignment counts-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF383-201/pos_patterns.ENCSR264LQX_ChIP_ZNF383_HepG2_ENCSR161OZI_counts_pattern_22.n_98-vs-ZNF383-201.alignment counts-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF383-201/pos_patterns.ENCSR264LQX_ChIP_ZNF383_HepG2_ENCSR161OZI_counts_pattern_23.n_94-vs-ZNF383-201.alignment counts-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF383-201/pos_patterns.ENCSR264LQX_ChIP_ZNF383_HepG2_ENCSR161OZI_counts_pattern_24.n_89-vs-ZNF383-201.alignment counts-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF383-201/pos_patterns.ENCSR264LQX_ChIP_ZNF383_HepG2_ENCSR161OZI_counts_pattern_25.n_74-vs-ZNF383-201.alignment counts-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF383-201/pos_patterns.ENCSR264LQX_ChIP_ZNF383_HepG2_ENCSR161OZI_counts_pattern_26.n_71-vs-ZNF383-201.alignment counts-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF383-201/pos_patterns.ENCSR264LQX_ChIP_ZNF383_HepG2_ENCSR161OZI_counts_pattern_2.n_397-vs-ZNF383-201.alignment counts-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF383-201/pos_patterns.ENCSR264LQX_ChIP_ZNF383_HepG2_ENCSR161OZI_counts_pattern_3.n_274-vs-ZNF383-201.alignment counts-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF383-201/pos_patterns.ENCSR264LQX_ChIP_ZNF383_HepG2_ENCSR161OZI_counts_pattern_4.n_267-vs-ZNF383-201.alignment counts-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF383-201/pos_patterns.ENCSR264LQX_ChIP_ZNF383_HepG2_ENCSR161OZI_counts_pattern_5.n_235-vs-ZNF383-201.alignment counts-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF383-201/pos_patterns.ENCSR264LQX_ChIP_ZNF383_HepG2_ENCSR161OZI_counts_pattern_6.n_218-vs-ZNF383-201.alignment counts-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF383-201/pos_patterns.ENCSR264LQX_ChIP_ZNF383_HepG2_ENCSR161OZI_counts_pattern_7.n_215-vs-ZNF383-201.alignment counts-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF383-201/pos_patterns.ENCSR264LQX_ChIP_ZNF383_HepG2_ENCSR161OZI_counts_pattern_8.n_207-vs-ZNF383-201.alignment counts-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF383-201/pos_patterns.ENCSR264LQX_ChIP_ZNF383_HepG2_ENCSR161OZI_counts_pattern_9.n_201-vs-ZNF383-201.alignment counts-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/Hughes_GR_models_ZNF384_counts-neg.pattern_0.n_85-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/Hughes_GR_models_ZNF384_counts-neg.pattern_1.n_30-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/Hughes_GR_models_ZNF384_counts-neg.pattern_2.n_28-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/Hughes_GR_models_ZNF384_counts-neg.pattern_3.n_27-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/Hughes_GR_models_ZNF384_counts-neg.pattern_4.n_24-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/Hughes_GR_models_ZNF384_counts-neg.pattern_5.n_24-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/Hughes_GR_models_ZNF384_counts-neg.pattern_6.n_20-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/Hughes_GR_models_ZNF384_counts-pos.pattern_0.n_5643-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/Hughes_GR_models_ZNF384_counts-pos.pattern_1.n_5116-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/Hughes_GR_models_ZNF384_counts-pos.pattern_2.n_4017-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/Hughes_GR_models_ZNF384_counts-pos.pattern_3.n_513-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/Hughes_GR_models_ZNF384_counts-pos.pattern_4.n_231-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/Hughes_GR_models_ZNF384_counts-pos.pattern_5.n_212-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/Hughes_GR_models_ZNF384_counts-pos.pattern_6.n_177-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/Hughes_GR_models_ZNF384_counts-pos.pattern_7.n_163-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/Hughes_GR_models_ZNF384_counts-pos.pattern_8.n_79-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/Hughes_GR_models_ZNF384_counts-pos.pattern_9.n_58-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_counts_pattern_0.n_48-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_counts_pattern_1.n_25-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_counts_pattern_0.n_9266-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_counts_pattern_10.n_44-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_counts_pattern_1.n_2251-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_counts_pattern_2.n_1650-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_counts_pattern_3.n_1175-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_counts_pattern_4.n_767-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_counts_pattern_5.n_635-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_counts_pattern_6.n_479-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_counts_pattern_7.n_462-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_counts_pattern_8.n_341-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_counts_pattern_9.n_47-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_counts_pattern_0.n_8917-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_counts_pattern_10.n_127-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_counts_pattern_11.n_72-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_counts_pattern_12.n_58-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_counts_pattern_13.n_55-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_counts_pattern_1.n_4295-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_counts_pattern_2.n_3108-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_counts_pattern_3.n_1728-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_counts_pattern_4.n_1392-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_counts_pattern_5.n_833-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_counts_pattern_6.n_497-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_counts_pattern_7.n_416-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_counts_pattern_8.n_229-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_counts_pattern_9.n_168-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_counts_pattern_0.n_7763-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_counts_pattern_10.n_402-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_counts_pattern_11.n_327-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_counts_pattern_12.n_130-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_counts_pattern_13.n_111-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_counts_pattern_14.n_83-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_counts_pattern_15.n_74-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_counts_pattern_16.n_58-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_counts_pattern_17.n_38-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_counts_pattern_18.n_35-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_counts_pattern_19.n_21-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_counts_pattern_1.n_3012-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_counts_pattern_2.n_2770-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_counts_pattern_3.n_1446-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_counts_pattern_4.n_913-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_counts_pattern_5.n_764-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_counts_pattern_6.n_607-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_counts_pattern_7.n_565-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_counts_pattern_8.n_412-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_counts_pattern_9.n_406-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_counts_pattern_0.n_7803-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_counts_pattern_1.n_7332-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_counts_pattern_2.n_2252-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_counts_pattern_3.n_162-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_counts_pattern_4.n_105-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_counts_pattern_5.n_100-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_counts_pattern_6.n_89-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_counts_pattern_7.n_68-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_counts_pattern_8.n_58-vs-ZNF384-201.alignment counts-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/Hughes_GR_models_ZNF384_counts-neg.pattern_0.n_85-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/Hughes_GR_models_ZNF384_counts-neg.pattern_1.n_30-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/Hughes_GR_models_ZNF384_counts-neg.pattern_2.n_28-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/Hughes_GR_models_ZNF384_counts-neg.pattern_3.n_27-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/Hughes_GR_models_ZNF384_counts-neg.pattern_4.n_24-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/Hughes_GR_models_ZNF384_counts-neg.pattern_5.n_24-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/Hughes_GR_models_ZNF384_counts-neg.pattern_6.n_20-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/Hughes_GR_models_ZNF384_counts-pos.pattern_0.n_5643-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/Hughes_GR_models_ZNF384_counts-pos.pattern_1.n_5116-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/Hughes_GR_models_ZNF384_counts-pos.pattern_2.n_4017-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/Hughes_GR_models_ZNF384_counts-pos.pattern_3.n_513-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/Hughes_GR_models_ZNF384_counts-pos.pattern_4.n_231-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/Hughes_GR_models_ZNF384_counts-pos.pattern_5.n_212-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/Hughes_GR_models_ZNF384_counts-pos.pattern_6.n_177-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/Hughes_GR_models_ZNF384_counts-pos.pattern_7.n_163-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/Hughes_GR_models_ZNF384_counts-pos.pattern_8.n_79-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/Hughes_GR_models_ZNF384_counts-pos.pattern_9.n_58-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_counts_pattern_0.n_48-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_counts_pattern_1.n_25-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_counts_pattern_0.n_9266-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_counts_pattern_10.n_44-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_counts_pattern_1.n_2251-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_counts_pattern_2.n_1650-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_counts_pattern_3.n_1175-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_counts_pattern_4.n_767-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_counts_pattern_5.n_635-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_counts_pattern_6.n_479-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_counts_pattern_7.n_462-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_counts_pattern_8.n_341-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_counts_pattern_9.n_47-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_counts_pattern_0.n_8917-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_counts_pattern_10.n_127-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_counts_pattern_11.n_72-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_counts_pattern_12.n_58-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_counts_pattern_13.n_55-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_counts_pattern_1.n_4295-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_counts_pattern_2.n_3108-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_counts_pattern_3.n_1728-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_counts_pattern_4.n_1392-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_counts_pattern_5.n_833-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_counts_pattern_6.n_497-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_counts_pattern_7.n_416-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_counts_pattern_8.n_229-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_counts_pattern_9.n_168-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_counts_pattern_0.n_7763-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_counts_pattern_10.n_402-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_counts_pattern_11.n_327-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_counts_pattern_12.n_130-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_counts_pattern_13.n_111-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_counts_pattern_14.n_83-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_counts_pattern_15.n_74-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_counts_pattern_16.n_58-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_counts_pattern_17.n_38-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_counts_pattern_18.n_35-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_counts_pattern_19.n_21-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_counts_pattern_1.n_3012-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_counts_pattern_2.n_2770-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_counts_pattern_3.n_1446-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_counts_pattern_4.n_913-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_counts_pattern_5.n_764-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_counts_pattern_6.n_607-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_counts_pattern_7.n_565-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_counts_pattern_8.n_412-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_counts_pattern_9.n_406-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_counts_pattern_0.n_7803-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_counts_pattern_1.n_7332-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_counts_pattern_2.n_2252-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_counts_pattern_3.n_162-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_counts_pattern_4.n_105-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_counts_pattern_5.n_100-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_counts_pattern_6.n_89-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_counts_pattern_7.n_68-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_counts_pattern_8.n_58-vs-ZNF384-203.alignment counts-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF391-201/pos_patterns.ENCSR210MET_ChIP_ZNF391_HEK293_ENCSR177OPL_counts_pattern_0.n_1591-vs-ZNF391-201.alignment counts-znf_b1h_alignment/ZNF391-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF391-201/pos_patterns.ENCSR210MET_ChIP_ZNF391_HEK293_ENCSR177OPL_counts_pattern_1.n_1541-vs-ZNF391-201.alignment counts-znf_b1h_alignment/ZNF391-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF391-201/pos_patterns.ENCSR210MET_ChIP_ZNF391_HEK293_ENCSR177OPL_counts_pattern_2.n_1345-vs-ZNF391-201.alignment counts-znf_b1h_alignment/ZNF391-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF391-201/pos_patterns.ENCSR210MET_ChIP_ZNF391_HEK293_ENCSR177OPL_counts_pattern_3.n_800-vs-ZNF391-201.alignment counts-znf_b1h_alignment/ZNF391-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF391-201/pos_patterns.ENCSR210MET_ChIP_ZNF391_HEK293_ENCSR177OPL_counts_pattern_4.n_561-vs-ZNF391-201.alignment counts-znf_b1h_alignment/ZNF391-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF391-201/pos_patterns.ENCSR210MET_ChIP_ZNF391_HEK293_ENCSR177OPL_counts_pattern_5.n_469-vs-ZNF391-201.alignment counts-znf_b1h_alignment/ZNF391-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF391-201/pos_patterns.ENCSR210MET_ChIP_ZNF391_HEK293_ENCSR177OPL_counts_pattern_6.n_139-vs-ZNF391-201.alignment counts-znf_b1h_alignment/ZNF391-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF391-201/pos_patterns.ENCSR210MET_ChIP_ZNF391_HEK293_ENCSR177OPL_counts_pattern_7.n_121-vs-ZNF391-201.alignment counts-znf_b1h_alignment/ZNF391-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF391-201/pos_patterns.ENCSR210MET_ChIP_ZNF391_HEK293_ENCSR177OPL_counts_pattern_8.n_39-vs-ZNF391-201.alignment counts-znf_b1h_alignment/ZNF391-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF394-201/pos_patterns.ENCSR125DNC_ChIP_ZNF394_HEK293_ENCSR523EEX_counts_pattern_0.n_7260-vs-ZNF394-201.alignment counts-znf_b1h_alignment/ZNF394-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF394-201/pos_patterns.ENCSR125DNC_ChIP_ZNF394_HEK293_ENCSR523EEX_counts_pattern_1.n_7109-vs-ZNF394-201.alignment counts-znf_b1h_alignment/ZNF394-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF394-201/pos_patterns.ENCSR125DNC_ChIP_ZNF394_HEK293_ENCSR523EEX_counts_pattern_2.n_2888-vs-ZNF394-201.alignment counts-znf_b1h_alignment/ZNF394-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF394-201/pos_patterns.ENCSR125DNC_ChIP_ZNF394_HEK293_ENCSR523EEX_counts_pattern_3.n_2426-vs-ZNF394-201.alignment counts-znf_b1h_alignment/ZNF394-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF394-201/pos_patterns.ENCSR125DNC_ChIP_ZNF394_HEK293_ENCSR523EEX_counts_pattern_4.n_199-vs-ZNF394-201.alignment counts-znf_b1h_alignment/ZNF394-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF394-201/pos_patterns.ENCSR125DNC_ChIP_ZNF394_HEK293_ENCSR523EEX_counts_pattern_5.n_20-vs-ZNF394-201.alignment counts-znf_b1h_alignment/ZNF394-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF395-201/neg_patterns.ENCSR462QZZ_ChIP_ZNF395_K562_ENCSR605ZPT_counts_pattern_0.n_40-vs-ZNF395-201.alignment counts-znf_b1h_alignment/ZNF395-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF395-201/neg_patterns.ENCSR462QZZ_ChIP_ZNF395_K562_ENCSR605ZPT_counts_pattern_1.n_36-vs-ZNF395-201.alignment counts-znf_b1h_alignment/ZNF395-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF395-201/pos_patterns.ENCSR462QZZ_ChIP_ZNF395_K562_ENCSR605ZPT_counts_pattern_0.n_7656-vs-ZNF395-201.alignment counts-znf_b1h_alignment/ZNF395-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF395-201/pos_patterns.ENCSR462QZZ_ChIP_ZNF395_K562_ENCSR605ZPT_counts_pattern_10.n_98-vs-ZNF395-201.alignment counts-znf_b1h_alignment/ZNF395-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF395-201/pos_patterns.ENCSR462QZZ_ChIP_ZNF395_K562_ENCSR605ZPT_counts_pattern_11.n_83-vs-ZNF395-201.alignment counts-znf_b1h_alignment/ZNF395-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF395-201/pos_patterns.ENCSR462QZZ_ChIP_ZNF395_K562_ENCSR605ZPT_counts_pattern_12.n_62-vs-ZNF395-201.alignment counts-znf_b1h_alignment/ZNF395-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF395-201/pos_patterns.ENCSR462QZZ_ChIP_ZNF395_K562_ENCSR605ZPT_counts_pattern_13.n_30-vs-ZNF395-201.alignment counts-znf_b1h_alignment/ZNF395-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF395-201/pos_patterns.ENCSR462QZZ_ChIP_ZNF395_K562_ENCSR605ZPT_counts_pattern_14.n_22-vs-ZNF395-201.alignment counts-znf_b1h_alignment/ZNF395-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF395-201/pos_patterns.ENCSR462QZZ_ChIP_ZNF395_K562_ENCSR605ZPT_counts_pattern_15.n_21-vs-ZNF395-201.alignment counts-znf_b1h_alignment/ZNF395-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF395-201/pos_patterns.ENCSR462QZZ_ChIP_ZNF395_K562_ENCSR605ZPT_counts_pattern_16.n_21-vs-ZNF395-201.alignment counts-znf_b1h_alignment/ZNF395-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF395-201/pos_patterns.ENCSR462QZZ_ChIP_ZNF395_K562_ENCSR605ZPT_counts_pattern_1.n_3142-vs-ZNF395-201.alignment counts-znf_b1h_alignment/ZNF395-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF395-201/pos_patterns.ENCSR462QZZ_ChIP_ZNF395_K562_ENCSR605ZPT_counts_pattern_2.n_1276-vs-ZNF395-201.alignment counts-znf_b1h_alignment/ZNF395-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF395-201/pos_patterns.ENCSR462QZZ_ChIP_ZNF395_K562_ENCSR605ZPT_counts_pattern_3.n_1162-vs-ZNF395-201.alignment counts-znf_b1h_alignment/ZNF395-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF395-201/pos_patterns.ENCSR462QZZ_ChIP_ZNF395_K562_ENCSR605ZPT_counts_pattern_4.n_865-vs-ZNF395-201.alignment counts-znf_b1h_alignment/ZNF395-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF395-201/pos_patterns.ENCSR462QZZ_ChIP_ZNF395_K562_ENCSR605ZPT_counts_pattern_5.n_554-vs-ZNF395-201.alignment counts-znf_b1h_alignment/ZNF395-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF395-201/pos_patterns.ENCSR462QZZ_ChIP_ZNF395_K562_ENCSR605ZPT_counts_pattern_6.n_472-vs-ZNF395-201.alignment counts-znf_b1h_alignment/ZNF395-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF395-201/pos_patterns.ENCSR462QZZ_ChIP_ZNF395_K562_ENCSR605ZPT_counts_pattern_7.n_282-vs-ZNF395-201.alignment counts-znf_b1h_alignment/ZNF395-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF395-201/pos_patterns.ENCSR462QZZ_ChIP_ZNF395_K562_ENCSR605ZPT_counts_pattern_8.n_222-vs-ZNF395-201.alignment counts-znf_b1h_alignment/ZNF395-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF395-201/pos_patterns.ENCSR462QZZ_ChIP_ZNF395_K562_ENCSR605ZPT_counts_pattern_9.n_122-vs-ZNF395-201.alignment counts-znf_b1h_alignment/ZNF395-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF396-201/neg_patterns.ENCSR422ODX_ChIP_ZNF396_WTC11_ENCSR703XBZ_counts_pattern_0.n_71-vs-ZNF396-201.alignment counts-znf_b1h_alignment/ZNF396-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF396-201/neg_patterns.ENCSR422ODX_ChIP_ZNF396_WTC11_ENCSR703XBZ_counts_pattern_1.n_35-vs-ZNF396-201.alignment counts-znf_b1h_alignment/ZNF396-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF396-201/neg_patterns.ENCSR422ODX_ChIP_ZNF396_WTC11_ENCSR703XBZ_counts_pattern_2.n_32-vs-ZNF396-201.alignment counts-znf_b1h_alignment/ZNF396-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF396-201/neg_patterns.ENCSR422ODX_ChIP_ZNF396_WTC11_ENCSR703XBZ_counts_pattern_3.n_28-vs-ZNF396-201.alignment counts-znf_b1h_alignment/ZNF396-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF396-201/pos_patterns.ENCSR422ODX_ChIP_ZNF396_WTC11_ENCSR703XBZ_counts_pattern_0.n_121-vs-ZNF396-201.alignment counts-znf_b1h_alignment/ZNF396-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF396-201/pos_patterns.ENCSR422ODX_ChIP_ZNF396_WTC11_ENCSR703XBZ_counts_pattern_10.n_29-vs-ZNF396-201.alignment counts-znf_b1h_alignment/ZNF396-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF396-201/pos_patterns.ENCSR422ODX_ChIP_ZNF396_WTC11_ENCSR703XBZ_counts_pattern_11.n_27-vs-ZNF396-201.alignment counts-znf_b1h_alignment/ZNF396-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF396-201/pos_patterns.ENCSR422ODX_ChIP_ZNF396_WTC11_ENCSR703XBZ_counts_pattern_12.n_26-vs-ZNF396-201.alignment counts-znf_b1h_alignment/ZNF396-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF396-201/pos_patterns.ENCSR422ODX_ChIP_ZNF396_WTC11_ENCSR703XBZ_counts_pattern_13.n_20-vs-ZNF396-201.alignment counts-znf_b1h_alignment/ZNF396-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF396-201/pos_patterns.ENCSR422ODX_ChIP_ZNF396_WTC11_ENCSR703XBZ_counts_pattern_1.n_91-vs-ZNF396-201.alignment counts-znf_b1h_alignment/ZNF396-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF396-201/pos_patterns.ENCSR422ODX_ChIP_ZNF396_WTC11_ENCSR703XBZ_counts_pattern_2.n_89-vs-ZNF396-201.alignment counts-znf_b1h_alignment/ZNF396-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF396-201/pos_patterns.ENCSR422ODX_ChIP_ZNF396_WTC11_ENCSR703XBZ_counts_pattern_3.n_48-vs-ZNF396-201.alignment counts-znf_b1h_alignment/ZNF396-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF396-201/pos_patterns.ENCSR422ODX_ChIP_ZNF396_WTC11_ENCSR703XBZ_counts_pattern_4.n_42-vs-ZNF396-201.alignment counts-znf_b1h_alignment/ZNF396-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF396-201/pos_patterns.ENCSR422ODX_ChIP_ZNF396_WTC11_ENCSR703XBZ_counts_pattern_5.n_42-vs-ZNF396-201.alignment counts-znf_b1h_alignment/ZNF396-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF396-201/pos_patterns.ENCSR422ODX_ChIP_ZNF396_WTC11_ENCSR703XBZ_counts_pattern_6.n_39-vs-ZNF396-201.alignment counts-znf_b1h_alignment/ZNF396-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF396-201/pos_patterns.ENCSR422ODX_ChIP_ZNF396_WTC11_ENCSR703XBZ_counts_pattern_7.n_37-vs-ZNF396-201.alignment counts-znf_b1h_alignment/ZNF396-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF396-201/pos_patterns.ENCSR422ODX_ChIP_ZNF396_WTC11_ENCSR703XBZ_counts_pattern_8.n_32-vs-ZNF396-201.alignment counts-znf_b1h_alignment/ZNF396-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF396-201/pos_patterns.ENCSR422ODX_ChIP_ZNF396_WTC11_ENCSR703XBZ_counts_pattern_9.n_31-vs-ZNF396-201.alignment counts-znf_b1h_alignment/ZNF396-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF397-202/pos_patterns.ENCSR508EEX_ChIP_ZNF397_K562_ENCSR644KWQ_counts_pattern_0.n_664-vs-ZNF397-202.alignment counts-znf_b1h_alignment/ZNF397-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF397-202/pos_patterns.ENCSR508EEX_ChIP_ZNF397_K562_ENCSR644KWQ_counts_pattern_1.n_111-vs-ZNF397-202.alignment counts-znf_b1h_alignment/ZNF397-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF397-202/pos_patterns.ENCSR508EEX_ChIP_ZNF397_K562_ENCSR644KWQ_counts_pattern_2.n_72-vs-ZNF397-202.alignment counts-znf_b1h_alignment/ZNF397-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF397-202/pos_patterns.ENCSR508EEX_ChIP_ZNF397_K562_ENCSR644KWQ_counts_pattern_3.n_49-vs-ZNF397-202.alignment counts-znf_b1h_alignment/ZNF397-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF397-202/pos_patterns.ENCSR508EEX_ChIP_ZNF397_K562_ENCSR644KWQ_counts_pattern_4.n_41-vs-ZNF397-202.alignment counts-znf_b1h_alignment/ZNF397-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF397-202/pos_patterns.ENCSR508EEX_ChIP_ZNF397_K562_ENCSR644KWQ_counts_pattern_5.n_39-vs-ZNF397-202.alignment counts-znf_b1h_alignment/ZNF397-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF397-202/pos_patterns.ENCSR508EEX_ChIP_ZNF397_K562_ENCSR644KWQ_counts_pattern_6.n_33-vs-ZNF397-202.alignment counts-znf_b1h_alignment/ZNF397-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF397-202/pos_patterns.ENCSR508EEX_ChIP_ZNF397_K562_ENCSR644KWQ_counts_pattern_7.n_29-vs-ZNF397-202.alignment counts-znf_b1h_alignment/ZNF397-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF397-202/pos_patterns.ENCSR508EEX_ChIP_ZNF397_K562_ENCSR644KWQ_counts_pattern_8.n_22-vs-ZNF397-202.alignment counts-znf_b1h_alignment/ZNF397-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF398-202/ChipExo_models_ZNF398_counts-pos.pattern_0.n_508-vs-ZNF398-202.alignment counts-znf_b1h_alignment/ZNF398-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF398-202/pos_patterns.ENCSR676ZEF_ChIP_ZNF398_HEK293_ENCSR654FJQ_counts_pattern_0.n_16254-vs-ZNF398-202.alignment counts-znf_b1h_alignment/ZNF398-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF398-202/pos_patterns.ENCSR676ZEF_ChIP_ZNF398_HEK293_ENCSR654FJQ_counts_pattern_1.n_2859-vs-ZNF398-202.alignment counts-znf_b1h_alignment/ZNF398-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF398-202/pos_patterns.ENCSR676ZEF_ChIP_ZNF398_HEK293_ENCSR654FJQ_counts_pattern_2.n_2318-vs-ZNF398-202.alignment counts-znf_b1h_alignment/ZNF398-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF398-202/pos_patterns.ENCSR676ZEF_ChIP_ZNF398_HEK293_ENCSR654FJQ_counts_pattern_3.n_960-vs-ZNF398-202.alignment counts-znf_b1h_alignment/ZNF398-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF398-202/pos_patterns.ENCSR676ZEF_ChIP_ZNF398_HEK293_ENCSR654FJQ_counts_pattern_4.n_716-vs-ZNF398-202.alignment counts-znf_b1h_alignment/ZNF398-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF398-202/pos_patterns.ENCSR676ZEF_ChIP_ZNF398_HEK293_ENCSR654FJQ_counts_pattern_5.n_378-vs-ZNF398-202.alignment counts-znf_b1h_alignment/ZNF398-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF398-202/pos_patterns.ENCSR676ZEF_ChIP_ZNF398_HEK293_ENCSR654FJQ_counts_pattern_6.n_273-vs-ZNF398-202.alignment counts-znf_b1h_alignment/ZNF398-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF398-202/pos_patterns.ENCSR676ZEF_ChIP_ZNF398_HEK293_ENCSR654FJQ_counts_pattern_7.n_242-vs-ZNF398-202.alignment counts-znf_b1h_alignment/ZNF398-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF398-202/pos_patterns.ENCSR676ZEF_ChIP_ZNF398_HEK293_ENCSR654FJQ_counts_pattern_8.n_127-vs-ZNF398-202.alignment counts-znf_b1h_alignment/ZNF398-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF398-202/pos_patterns.ENCSR676ZEF_ChIP_ZNF398_HEK293_ENCSR654FJQ_counts_pattern_9.n_120-vs-ZNF398-202.alignment counts-znf_b1h_alignment/ZNF398-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF398-202/pos_patterns.ENCSR948JND_ChIP_ZNF398_K562_ENCSR106FTO_counts_pattern_0.n_631-vs-ZNF398-202.alignment counts-znf_b1h_alignment/ZNF398-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF398-202/pos_patterns.ENCSR948JND_ChIP_ZNF398_K562_ENCSR106FTO_counts_pattern_1.n_25-vs-ZNF398-202.alignment counts-znf_b1h_alignment/ZNF398-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF398-202/pos_patterns.ENCSR948JND_ChIP_ZNF398_K562_ENCSR106FTO_counts_pattern_2.n_20-vs-ZNF398-202.alignment counts-znf_b1h_alignment/ZNF398-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF404-201/pos_patterns.ENCSR669GUM_ChIP_ZNF404_HEK293_ENCSR386RTO_counts_pattern_0.n_1844-vs-ZNF404-201.alignment counts-znf_b1h_alignment/ZNF404-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF404-201/pos_patterns.ENCSR669GUM_ChIP_ZNF404_HEK293_ENCSR386RTO_counts_pattern_1.n_144-vs-ZNF404-201.alignment counts-znf_b1h_alignment/ZNF404-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-201/neg_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_0.n_39-vs-ZNF407-201.alignment counts-znf_b1h_alignment/ZNF407-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-201/neg_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_1.n_39-vs-ZNF407-201.alignment counts-znf_b1h_alignment/ZNF407-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-201/neg_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_2.n_27-vs-ZNF407-201.alignment counts-znf_b1h_alignment/ZNF407-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-201/neg_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_3.n_22-vs-ZNF407-201.alignment counts-znf_b1h_alignment/ZNF407-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-201/pos_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_0.n_3379-vs-ZNF407-201.alignment counts-znf_b1h_alignment/ZNF407-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-201/pos_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_10.n_24-vs-ZNF407-201.alignment counts-znf_b1h_alignment/ZNF407-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-201/pos_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_1.n_1767-vs-ZNF407-201.alignment counts-znf_b1h_alignment/ZNF407-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-201/pos_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_2.n_1021-vs-ZNF407-201.alignment counts-znf_b1h_alignment/ZNF407-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-201/pos_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_3.n_842-vs-ZNF407-201.alignment counts-znf_b1h_alignment/ZNF407-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-201/pos_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_4.n_451-vs-ZNF407-201.alignment counts-znf_b1h_alignment/ZNF407-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-201/pos_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_5.n_221-vs-ZNF407-201.alignment counts-znf_b1h_alignment/ZNF407-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-201/pos_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_6.n_172-vs-ZNF407-201.alignment counts-znf_b1h_alignment/ZNF407-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-201/pos_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_7.n_150-vs-ZNF407-201.alignment counts-znf_b1h_alignment/ZNF407-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-201/pos_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_8.n_94-vs-ZNF407-201.alignment counts-znf_b1h_alignment/ZNF407-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-201/pos_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_9.n_82-vs-ZNF407-201.alignment counts-znf_b1h_alignment/ZNF407-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-201/pos_patterns.ENCSR011NOZ_ChIP_ZNF407_K562_ENCSR723BLF_counts_pattern_0.n_1985-vs-ZNF407-201.alignment counts-znf_b1h_alignment/ZNF407-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-201/pos_patterns.ENCSR439OCL_ChIP_ZNF407_K562_ENCSR455WPF_counts_pattern_0.n_1575-vs-ZNF407-201.alignment counts-znf_b1h_alignment/ZNF407-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-201/pos_patterns.ENCSR439OCL_ChIP_ZNF407_K562_ENCSR455WPF_counts_pattern_1.n_693-vs-ZNF407-201.alignment counts-znf_b1h_alignment/ZNF407-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-202/neg_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_0.n_39-vs-ZNF407-202.alignment counts-znf_b1h_alignment/ZNF407-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-202/neg_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_1.n_39-vs-ZNF407-202.alignment counts-znf_b1h_alignment/ZNF407-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-202/neg_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_2.n_27-vs-ZNF407-202.alignment counts-znf_b1h_alignment/ZNF407-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-202/neg_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_3.n_22-vs-ZNF407-202.alignment counts-znf_b1h_alignment/ZNF407-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-202/pos_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_0.n_3379-vs-ZNF407-202.alignment counts-znf_b1h_alignment/ZNF407-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-202/pos_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_10.n_24-vs-ZNF407-202.alignment counts-znf_b1h_alignment/ZNF407-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-202/pos_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_1.n_1767-vs-ZNF407-202.alignment counts-znf_b1h_alignment/ZNF407-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-202/pos_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_2.n_1021-vs-ZNF407-202.alignment counts-znf_b1h_alignment/ZNF407-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-202/pos_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_3.n_842-vs-ZNF407-202.alignment counts-znf_b1h_alignment/ZNF407-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-202/pos_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_4.n_451-vs-ZNF407-202.alignment counts-znf_b1h_alignment/ZNF407-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-202/pos_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_5.n_221-vs-ZNF407-202.alignment counts-znf_b1h_alignment/ZNF407-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-202/pos_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_6.n_172-vs-ZNF407-202.alignment counts-znf_b1h_alignment/ZNF407-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-202/pos_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_7.n_150-vs-ZNF407-202.alignment counts-znf_b1h_alignment/ZNF407-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-202/pos_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_8.n_94-vs-ZNF407-202.alignment counts-znf_b1h_alignment/ZNF407-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-202/pos_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_9.n_82-vs-ZNF407-202.alignment counts-znf_b1h_alignment/ZNF407-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-202/pos_patterns.ENCSR011NOZ_ChIP_ZNF407_K562_ENCSR723BLF_counts_pattern_0.n_1985-vs-ZNF407-202.alignment counts-znf_b1h_alignment/ZNF407-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-202/pos_patterns.ENCSR439OCL_ChIP_ZNF407_K562_ENCSR455WPF_counts_pattern_0.n_1575-vs-ZNF407-202.alignment counts-znf_b1h_alignment/ZNF407-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-202/pos_patterns.ENCSR439OCL_ChIP_ZNF407_K562_ENCSR455WPF_counts_pattern_1.n_693-vs-ZNF407-202.alignment counts-znf_b1h_alignment/ZNF407-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-205/neg_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_0.n_39-vs-ZNF407-205.alignment counts-znf_b1h_alignment/ZNF407-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-205/neg_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_1.n_39-vs-ZNF407-205.alignment counts-znf_b1h_alignment/ZNF407-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-205/neg_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_2.n_27-vs-ZNF407-205.alignment counts-znf_b1h_alignment/ZNF407-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-205/neg_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_3.n_22-vs-ZNF407-205.alignment counts-znf_b1h_alignment/ZNF407-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-205/pos_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_0.n_3379-vs-ZNF407-205.alignment counts-znf_b1h_alignment/ZNF407-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-205/pos_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_10.n_24-vs-ZNF407-205.alignment counts-znf_b1h_alignment/ZNF407-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-205/pos_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_1.n_1767-vs-ZNF407-205.alignment counts-znf_b1h_alignment/ZNF407-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-205/pos_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_2.n_1021-vs-ZNF407-205.alignment counts-znf_b1h_alignment/ZNF407-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-205/pos_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_3.n_842-vs-ZNF407-205.alignment counts-znf_b1h_alignment/ZNF407-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-205/pos_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_4.n_451-vs-ZNF407-205.alignment counts-znf_b1h_alignment/ZNF407-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-205/pos_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_5.n_221-vs-ZNF407-205.alignment counts-znf_b1h_alignment/ZNF407-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-205/pos_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_6.n_172-vs-ZNF407-205.alignment counts-znf_b1h_alignment/ZNF407-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-205/pos_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_7.n_150-vs-ZNF407-205.alignment counts-znf_b1h_alignment/ZNF407-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-205/pos_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_8.n_94-vs-ZNF407-205.alignment counts-znf_b1h_alignment/ZNF407-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-205/pos_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_counts_pattern_9.n_82-vs-ZNF407-205.alignment counts-znf_b1h_alignment/ZNF407-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-205/pos_patterns.ENCSR011NOZ_ChIP_ZNF407_K562_ENCSR723BLF_counts_pattern_0.n_1985-vs-ZNF407-205.alignment counts-znf_b1h_alignment/ZNF407-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-205/pos_patterns.ENCSR439OCL_ChIP_ZNF407_K562_ENCSR455WPF_counts_pattern_0.n_1575-vs-ZNF407-205.alignment counts-znf_b1h_alignment/ZNF407-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF407-205/pos_patterns.ENCSR439OCL_ChIP_ZNF407_K562_ENCSR455WPF_counts_pattern_1.n_693-vs-ZNF407-205.alignment counts-znf_b1h_alignment/ZNF407-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF408-201/pos_patterns.ENCSR758PLU_ChIP_ZNF408_K562_ENCSR475HQD_counts_pattern_0.n_305-vs-ZNF408-201.alignment counts-znf_b1h_alignment/ZNF408-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF408-201/pos_patterns.ENCSR758PLU_ChIP_ZNF408_K562_ENCSR475HQD_counts_pattern_1.n_54-vs-ZNF408-201.alignment counts-znf_b1h_alignment/ZNF408-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF408-201/pos_patterns.ENCSR758PLU_ChIP_ZNF408_K562_ENCSR475HQD_counts_pattern_2.n_35-vs-ZNF408-201.alignment counts-znf_b1h_alignment/ZNF408-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF408-201/pos_patterns.ENCSR758PLU_ChIP_ZNF408_K562_ENCSR475HQD_counts_pattern_3.n_32-vs-ZNF408-201.alignment counts-znf_b1h_alignment/ZNF408-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF408-201/pos_patterns.ENCSR758PLU_ChIP_ZNF408_K562_ENCSR475HQD_counts_pattern_4.n_29-vs-ZNF408-201.alignment counts-znf_b1h_alignment/ZNF408-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF408-201/pos_patterns.ENCSR758PLU_ChIP_ZNF408_K562_ENCSR475HQD_counts_pattern_5.n_23-vs-ZNF408-201.alignment counts-znf_b1h_alignment/ZNF408-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF41-201/Hughes_GR_models_ZNF41_counts-pos.pattern_0.n_1227-vs-ZNF41-201.alignment counts-znf_b1h_alignment/ZNF41-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF41-201/Hughes_GR_models_ZNF41_counts-pos.pattern_1.n_25-vs-ZNF41-201.alignment counts-znf_b1h_alignment/ZNF41-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF41-201/Hughes_GR_models_ZNF41_counts-pos.pattern_2.n_25-vs-ZNF41-201.alignment counts-znf_b1h_alignment/ZNF41-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF41-201/Hughes_GR_models_ZNF41_counts-pos.pattern_3.n_24-vs-ZNF41-201.alignment counts-znf_b1h_alignment/ZNF41-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF41-201/Hughes_NB_models_ZNF41_counts-pos.pattern_0.n_669-vs-ZNF41-201.alignment counts-znf_b1h_alignment/ZNF41-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF41-201/pos_patterns.ENCSR235PYI_ChIP_ZNF41_K562_ENCSR666XEJ_counts_pattern_0.n_1545-vs-ZNF41-201.alignment counts-znf_b1h_alignment/ZNF41-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF41-201/pos_patterns.ENCSR235PYI_ChIP_ZNF41_K562_ENCSR666XEJ_counts_pattern_1.n_505-vs-ZNF41-201.alignment counts-znf_b1h_alignment/ZNF41-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF41-201/pos_patterns.ENCSR235PYI_ChIP_ZNF41_K562_ENCSR666XEJ_counts_pattern_2.n_355-vs-ZNF41-201.alignment counts-znf_b1h_alignment/ZNF41-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF41-201/pos_patterns.ENCSR235PYI_ChIP_ZNF41_K562_ENCSR666XEJ_counts_pattern_3.n_56-vs-ZNF41-201.alignment counts-znf_b1h_alignment/ZNF41-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF414-201/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_counts_pattern_0.n_3429-vs-ZNF414-201.alignment counts-znf_b1h_alignment/ZNF414-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF414-201/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_counts_pattern_10.n_125-vs-ZNF414-201.alignment counts-znf_b1h_alignment/ZNF414-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF414-201/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_counts_pattern_11.n_88-vs-ZNF414-201.alignment counts-znf_b1h_alignment/ZNF414-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF414-201/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_counts_pattern_12.n_83-vs-ZNF414-201.alignment counts-znf_b1h_alignment/ZNF414-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF414-201/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_counts_pattern_13.n_66-vs-ZNF414-201.alignment counts-znf_b1h_alignment/ZNF414-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF414-201/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_counts_pattern_14.n_47-vs-ZNF414-201.alignment counts-znf_b1h_alignment/ZNF414-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF414-201/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_counts_pattern_1.n_3095-vs-ZNF414-201.alignment counts-znf_b1h_alignment/ZNF414-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF414-201/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_counts_pattern_2.n_1269-vs-ZNF414-201.alignment counts-znf_b1h_alignment/ZNF414-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF414-201/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_counts_pattern_3.n_529-vs-ZNF414-201.alignment counts-znf_b1h_alignment/ZNF414-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF414-201/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_counts_pattern_4.n_381-vs-ZNF414-201.alignment counts-znf_b1h_alignment/ZNF414-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF414-201/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_counts_pattern_5.n_263-vs-ZNF414-201.alignment counts-znf_b1h_alignment/ZNF414-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF414-201/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_counts_pattern_6.n_251-vs-ZNF414-201.alignment counts-znf_b1h_alignment/ZNF414-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF414-201/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_counts_pattern_7.n_238-vs-ZNF414-201.alignment counts-znf_b1h_alignment/ZNF414-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF414-201/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_counts_pattern_8.n_176-vs-ZNF414-201.alignment counts-znf_b1h_alignment/ZNF414-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF414-201/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_counts_pattern_9.n_141-vs-ZNF414-201.alignment counts-znf_b1h_alignment/ZNF414-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF414-202/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_counts_pattern_0.n_3429-vs-ZNF414-202.alignment counts-znf_b1h_alignment/ZNF414-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF414-202/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_counts_pattern_10.n_125-vs-ZNF414-202.alignment counts-znf_b1h_alignment/ZNF414-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF414-202/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_counts_pattern_11.n_88-vs-ZNF414-202.alignment counts-znf_b1h_alignment/ZNF414-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF414-202/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_counts_pattern_12.n_83-vs-ZNF414-202.alignment counts-znf_b1h_alignment/ZNF414-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF414-202/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_counts_pattern_13.n_66-vs-ZNF414-202.alignment counts-znf_b1h_alignment/ZNF414-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF414-202/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_counts_pattern_14.n_47-vs-ZNF414-202.alignment counts-znf_b1h_alignment/ZNF414-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF414-202/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_counts_pattern_1.n_3095-vs-ZNF414-202.alignment counts-znf_b1h_alignment/ZNF414-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF414-202/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_counts_pattern_2.n_1269-vs-ZNF414-202.alignment counts-znf_b1h_alignment/ZNF414-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF414-202/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_counts_pattern_3.n_529-vs-ZNF414-202.alignment counts-znf_b1h_alignment/ZNF414-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF414-202/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_counts_pattern_4.n_381-vs-ZNF414-202.alignment counts-znf_b1h_alignment/ZNF414-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF414-202/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_counts_pattern_5.n_263-vs-ZNF414-202.alignment counts-znf_b1h_alignment/ZNF414-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF414-202/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_counts_pattern_6.n_251-vs-ZNF414-202.alignment counts-znf_b1h_alignment/ZNF414-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF414-202/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_counts_pattern_7.n_238-vs-ZNF414-202.alignment counts-znf_b1h_alignment/ZNF414-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF414-202/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_counts_pattern_8.n_176-vs-ZNF414-202.alignment counts-znf_b1h_alignment/ZNF414-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF414-202/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_counts_pattern_9.n_141-vs-ZNF414-202.alignment counts-znf_b1h_alignment/ZNF414-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF415-201/Hughes_NB_models_ZNF415_counts-pos.pattern_0.n_87-vs-ZNF415-201.alignment counts-znf_b1h_alignment/ZNF415-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF415-201/Hughes_NB_models_ZNF415_counts-pos.pattern_1.n_28-vs-ZNF415-201.alignment counts-znf_b1h_alignment/ZNF415-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF415-201/Hughes_NB_models_ZNF415_counts-pos.pattern_2.n_27-vs-ZNF415-201.alignment counts-znf_b1h_alignment/ZNF415-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF415-201/Hughes_NB_models_ZNF415_counts-pos.pattern_3.n_23-vs-ZNF415-201.alignment counts-znf_b1h_alignment/ZNF415-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF415-201/Hughes_NB_models_ZNF415_counts-pos.pattern_4.n_20-vs-ZNF415-201.alignment counts-znf_b1h_alignment/ZNF415-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF415-224/Hughes_NB_models_ZNF415_counts-pos.pattern_0.n_87-vs-ZNF415-224.alignment counts-znf_b1h_alignment/ZNF415-224/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF415-224/Hughes_NB_models_ZNF415_counts-pos.pattern_1.n_28-vs-ZNF415-224.alignment counts-znf_b1h_alignment/ZNF415-224/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF415-224/Hughes_NB_models_ZNF415_counts-pos.pattern_2.n_27-vs-ZNF415-224.alignment counts-znf_b1h_alignment/ZNF415-224/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF415-224/Hughes_NB_models_ZNF415_counts-pos.pattern_3.n_23-vs-ZNF415-224.alignment counts-znf_b1h_alignment/ZNF415-224/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF415-224/Hughes_NB_models_ZNF415_counts-pos.pattern_4.n_20-vs-ZNF415-224.alignment counts-znf_b1h_alignment/ZNF415-224/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF416-201/Hughes_NB_models_ZNF416_counts-pos.pattern_0.n_219-vs-ZNF416-201.alignment counts-znf_b1h_alignment/ZNF416-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF416-201/Hughes_NB_models_ZNF416_counts-pos.pattern_1.n_131-vs-ZNF416-201.alignment counts-znf_b1h_alignment/ZNF416-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF416-201/Hughes_NB_models_ZNF416_counts-pos.pattern_2.n_30-vs-ZNF416-201.alignment counts-znf_b1h_alignment/ZNF416-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF416-201/neg_patterns.ENCSR288NNJ_ChIP_ZNF416_WTC11_ENCSR094YJY_counts_pattern_0.n_241-vs-ZNF416-201.alignment counts-znf_b1h_alignment/ZNF416-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF416-201/neg_patterns.ENCSR288NNJ_ChIP_ZNF416_WTC11_ENCSR094YJY_counts_pattern_1.n_46-vs-ZNF416-201.alignment counts-znf_b1h_alignment/ZNF416-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF416-201/neg_patterns.ENCSR288NNJ_ChIP_ZNF416_WTC11_ENCSR094YJY_counts_pattern_2.n_31-vs-ZNF416-201.alignment counts-znf_b1h_alignment/ZNF416-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF416-201/pos_patterns.ENCSR288NNJ_ChIP_ZNF416_WTC11_ENCSR094YJY_counts_pattern_0.n_694-vs-ZNF416-201.alignment counts-znf_b1h_alignment/ZNF416-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF416-201/pos_patterns.ENCSR288NNJ_ChIP_ZNF416_WTC11_ENCSR094YJY_counts_pattern_10.n_48-vs-ZNF416-201.alignment counts-znf_b1h_alignment/ZNF416-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF416-201/pos_patterns.ENCSR288NNJ_ChIP_ZNF416_WTC11_ENCSR094YJY_counts_pattern_11.n_47-vs-ZNF416-201.alignment counts-znf_b1h_alignment/ZNF416-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF416-201/pos_patterns.ENCSR288NNJ_ChIP_ZNF416_WTC11_ENCSR094YJY_counts_pattern_12.n_26-vs-ZNF416-201.alignment counts-znf_b1h_alignment/ZNF416-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF416-201/pos_patterns.ENCSR288NNJ_ChIP_ZNF416_WTC11_ENCSR094YJY_counts_pattern_13.n_25-vs-ZNF416-201.alignment counts-znf_b1h_alignment/ZNF416-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF416-201/pos_patterns.ENCSR288NNJ_ChIP_ZNF416_WTC11_ENCSR094YJY_counts_pattern_14.n_25-vs-ZNF416-201.alignment counts-znf_b1h_alignment/ZNF416-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF416-201/pos_patterns.ENCSR288NNJ_ChIP_ZNF416_WTC11_ENCSR094YJY_counts_pattern_15.n_21-vs-ZNF416-201.alignment counts-znf_b1h_alignment/ZNF416-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF416-201/pos_patterns.ENCSR288NNJ_ChIP_ZNF416_WTC11_ENCSR094YJY_counts_pattern_16.n_20-vs-ZNF416-201.alignment counts-znf_b1h_alignment/ZNF416-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF416-201/pos_patterns.ENCSR288NNJ_ChIP_ZNF416_WTC11_ENCSR094YJY_counts_pattern_1.n_522-vs-ZNF416-201.alignment counts-znf_b1h_alignment/ZNF416-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF416-201/pos_patterns.ENCSR288NNJ_ChIP_ZNF416_WTC11_ENCSR094YJY_counts_pattern_2.n_386-vs-ZNF416-201.alignment counts-znf_b1h_alignment/ZNF416-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF416-201/pos_patterns.ENCSR288NNJ_ChIP_ZNF416_WTC11_ENCSR094YJY_counts_pattern_3.n_219-vs-ZNF416-201.alignment counts-znf_b1h_alignment/ZNF416-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF416-201/pos_patterns.ENCSR288NNJ_ChIP_ZNF416_WTC11_ENCSR094YJY_counts_pattern_4.n_161-vs-ZNF416-201.alignment counts-znf_b1h_alignment/ZNF416-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF416-201/pos_patterns.ENCSR288NNJ_ChIP_ZNF416_WTC11_ENCSR094YJY_counts_pattern_5.n_160-vs-ZNF416-201.alignment counts-znf_b1h_alignment/ZNF416-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF416-201/pos_patterns.ENCSR288NNJ_ChIP_ZNF416_WTC11_ENCSR094YJY_counts_pattern_6.n_144-vs-ZNF416-201.alignment counts-znf_b1h_alignment/ZNF416-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF416-201/pos_patterns.ENCSR288NNJ_ChIP_ZNF416_WTC11_ENCSR094YJY_counts_pattern_7.n_136-vs-ZNF416-201.alignment counts-znf_b1h_alignment/ZNF416-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF416-201/pos_patterns.ENCSR288NNJ_ChIP_ZNF416_WTC11_ENCSR094YJY_counts_pattern_8.n_100-vs-ZNF416-201.alignment counts-znf_b1h_alignment/ZNF416-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF416-201/pos_patterns.ENCSR288NNJ_ChIP_ZNF416_WTC11_ENCSR094YJY_counts_pattern_9.n_78-vs-ZNF416-201.alignment counts-znf_b1h_alignment/ZNF416-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF416-201/pos_patterns.ENCSR604CNJ_ChIP_ZNF416_HEK293_ENCSR970AVG_counts_pattern_0.n_247-vs-ZNF416-201.alignment counts-znf_b1h_alignment/ZNF416-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF416-201/pos_patterns.ENCSR604CNJ_ChIP_ZNF416_HEK293_ENCSR970AVG_counts_pattern_1.n_236-vs-ZNF416-201.alignment counts-znf_b1h_alignment/ZNF416-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF416-201/pos_patterns.ENCSR604CNJ_ChIP_ZNF416_HEK293_ENCSR970AVG_counts_pattern_2.n_36-vs-ZNF416-201.alignment counts-znf_b1h_alignment/ZNF416-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF416-201/pos_patterns.ENCSR604CNJ_ChIP_ZNF416_HEK293_ENCSR970AVG_counts_pattern_3.n_34-vs-ZNF416-201.alignment counts-znf_b1h_alignment/ZNF416-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF417-201/ChipExo_models_ZNF417_counts-pos.pattern_0.n_1158-vs-ZNF417-201.alignment counts-znf_b1h_alignment/ZNF417-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF418-201/ChipExo_models_ZNF418_counts-pos.pattern_0.n_288-vs-ZNF418-201.alignment counts-znf_b1h_alignment/ZNF418-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF418-201/ChipExo_models_ZNF418_counts-pos.pattern_1.n_74-vs-ZNF418-201.alignment counts-znf_b1h_alignment/ZNF418-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF418-201/ChipExo_models_ZNF418_counts-pos.pattern_2.n_51-vs-ZNF418-201.alignment counts-znf_b1h_alignment/ZNF418-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF418-201/ChipExo_models_ZNF418_counts-pos.pattern_3.n_31-vs-ZNF418-201.alignment counts-znf_b1h_alignment/ZNF418-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF418-201/Hughes_GR_models_ZNF418_counts-pos.pattern_0.n_112-vs-ZNF418-201.alignment counts-znf_b1h_alignment/ZNF418-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF418-201/Hughes_GR_models_ZNF418_counts-pos.pattern_1.n_90-vs-ZNF418-201.alignment counts-znf_b1h_alignment/ZNF418-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF418-201/Hughes_GR_models_ZNF418_counts-pos.pattern_2.n_43-vs-ZNF418-201.alignment counts-znf_b1h_alignment/ZNF418-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF419-201/ChipExo_models_ZNF419_counts-pos.pattern_0.n_244-vs-ZNF419-201.alignment counts-znf_b1h_alignment/ZNF419-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF419-201/ChipExo_models_ZNF419_counts-pos.pattern_1.n_40-vs-ZNF419-201.alignment counts-znf_b1h_alignment/ZNF419-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF423-201/pos_patterns.ENCSR413CVQ_ChIP_ZNF423_WTC11_ENCSR148KSW_counts_pattern_0.n_14301-vs-ZNF423-201.alignment counts-znf_b1h_alignment/ZNF423-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF423-201/pos_patterns.ENCSR413CVQ_ChIP_ZNF423_WTC11_ENCSR148KSW_counts_pattern_1.n_212-vs-ZNF423-201.alignment counts-znf_b1h_alignment/ZNF423-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF423-201/pos_patterns.ENCSR413CVQ_ChIP_ZNF423_WTC11_ENCSR148KSW_counts_pattern_2.n_31-vs-ZNF423-201.alignment counts-znf_b1h_alignment/ZNF423-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF423-201/pos_patterns.ENCSR413CVQ_ChIP_ZNF423_WTC11_ENCSR148KSW_counts_pattern_3.n_21-vs-ZNF423-201.alignment counts-znf_b1h_alignment/ZNF423-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF423-201/pos_patterns.ENCSR413CVQ_ChIP_ZNF423_WTC11_ENCSR148KSW_counts_pattern_4.n_21-vs-ZNF423-201.alignment counts-znf_b1h_alignment/ZNF423-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF423-201/pos_patterns.ENCSR477OJI_ChIP_ZNF423_HEK293_ENCSR286FWU_counts_pattern_0.n_3927-vs-ZNF423-201.alignment counts-znf_b1h_alignment/ZNF423-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF423-201/pos_patterns.ENCSR477OJI_ChIP_ZNF423_HEK293_ENCSR286FWU_counts_pattern_1.n_1432-vs-ZNF423-201.alignment counts-znf_b1h_alignment/ZNF423-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF423-202/pos_patterns.ENCSR413CVQ_ChIP_ZNF423_WTC11_ENCSR148KSW_counts_pattern_0.n_14301-vs-ZNF423-202.alignment counts-znf_b1h_alignment/ZNF423-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF423-202/pos_patterns.ENCSR413CVQ_ChIP_ZNF423_WTC11_ENCSR148KSW_counts_pattern_1.n_212-vs-ZNF423-202.alignment counts-znf_b1h_alignment/ZNF423-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF423-202/pos_patterns.ENCSR413CVQ_ChIP_ZNF423_WTC11_ENCSR148KSW_counts_pattern_2.n_31-vs-ZNF423-202.alignment counts-znf_b1h_alignment/ZNF423-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF423-202/pos_patterns.ENCSR413CVQ_ChIP_ZNF423_WTC11_ENCSR148KSW_counts_pattern_3.n_21-vs-ZNF423-202.alignment counts-znf_b1h_alignment/ZNF423-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF423-202/pos_patterns.ENCSR413CVQ_ChIP_ZNF423_WTC11_ENCSR148KSW_counts_pattern_4.n_21-vs-ZNF423-202.alignment counts-znf_b1h_alignment/ZNF423-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF423-202/pos_patterns.ENCSR477OJI_ChIP_ZNF423_HEK293_ENCSR286FWU_counts_pattern_0.n_3927-vs-ZNF423-202.alignment counts-znf_b1h_alignment/ZNF423-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF423-202/pos_patterns.ENCSR477OJI_ChIP_ZNF423_HEK293_ENCSR286FWU_counts_pattern_1.n_1432-vs-ZNF423-202.alignment counts-znf_b1h_alignment/ZNF423-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF425-201/ChipExo_models_ZNF425_counts-pos.pattern_0.n_1900-vs-ZNF425-201.alignment counts-znf_b1h_alignment/ZNF425-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF425-201/ChipExo_models_ZNF425_counts-pos.pattern_1.n_1570-vs-ZNF425-201.alignment counts-znf_b1h_alignment/ZNF425-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF425-201/ChipExo_models_ZNF425_counts-pos.pattern_2.n_360-vs-ZNF425-201.alignment counts-znf_b1h_alignment/ZNF425-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF425-201/neg_patterns.ENCSR717QWW_ChIP_ZNF425_WTC11_ENCSR893YXI_counts_pattern_0.n_729-vs-ZNF425-201.alignment counts-znf_b1h_alignment/ZNF425-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF425-201/neg_patterns.ENCSR717QWW_ChIP_ZNF425_WTC11_ENCSR893YXI_counts_pattern_1.n_137-vs-ZNF425-201.alignment counts-znf_b1h_alignment/ZNF425-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF425-201/neg_patterns.ENCSR717QWW_ChIP_ZNF425_WTC11_ENCSR893YXI_counts_pattern_2.n_43-vs-ZNF425-201.alignment counts-znf_b1h_alignment/ZNF425-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF425-201/pos_patterns.ENCSR717QWW_ChIP_ZNF425_WTC11_ENCSR893YXI_counts_pattern_0.n_129-vs-ZNF425-201.alignment counts-znf_b1h_alignment/ZNF425-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF425-201/pos_patterns.ENCSR717QWW_ChIP_ZNF425_WTC11_ENCSR893YXI_counts_pattern_10.n_23-vs-ZNF425-201.alignment counts-znf_b1h_alignment/ZNF425-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF425-201/pos_patterns.ENCSR717QWW_ChIP_ZNF425_WTC11_ENCSR893YXI_counts_pattern_11.n_20-vs-ZNF425-201.alignment counts-znf_b1h_alignment/ZNF425-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF425-201/pos_patterns.ENCSR717QWW_ChIP_ZNF425_WTC11_ENCSR893YXI_counts_pattern_1.n_62-vs-ZNF425-201.alignment counts-znf_b1h_alignment/ZNF425-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF425-201/pos_patterns.ENCSR717QWW_ChIP_ZNF425_WTC11_ENCSR893YXI_counts_pattern_2.n_45-vs-ZNF425-201.alignment counts-znf_b1h_alignment/ZNF425-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF425-201/pos_patterns.ENCSR717QWW_ChIP_ZNF425_WTC11_ENCSR893YXI_counts_pattern_3.n_34-vs-ZNF425-201.alignment counts-znf_b1h_alignment/ZNF425-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF425-201/pos_patterns.ENCSR717QWW_ChIP_ZNF425_WTC11_ENCSR893YXI_counts_pattern_4.n_32-vs-ZNF425-201.alignment counts-znf_b1h_alignment/ZNF425-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF425-201/pos_patterns.ENCSR717QWW_ChIP_ZNF425_WTC11_ENCSR893YXI_counts_pattern_5.n_28-vs-ZNF425-201.alignment counts-znf_b1h_alignment/ZNF425-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF425-201/pos_patterns.ENCSR717QWW_ChIP_ZNF425_WTC11_ENCSR893YXI_counts_pattern_6.n_27-vs-ZNF425-201.alignment counts-znf_b1h_alignment/ZNF425-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF425-201/pos_patterns.ENCSR717QWW_ChIP_ZNF425_WTC11_ENCSR893YXI_counts_pattern_7.n_25-vs-ZNF425-201.alignment counts-znf_b1h_alignment/ZNF425-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF425-201/pos_patterns.ENCSR717QWW_ChIP_ZNF425_WTC11_ENCSR893YXI_counts_pattern_8.n_24-vs-ZNF425-201.alignment counts-znf_b1h_alignment/ZNF425-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF425-201/pos_patterns.ENCSR717QWW_ChIP_ZNF425_WTC11_ENCSR893YXI_counts_pattern_9.n_23-vs-ZNF425-201.alignment counts-znf_b1h_alignment/ZNF425-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF426-201/neg_patterns.ENCSR224NFP_ChIP_ZNF426_HEK293_ENCSR841VYM_counts_pattern_0.n_136-vs-ZNF426-201.alignment counts-znf_b1h_alignment/ZNF426-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF426-201/pos_patterns.ENCSR224NFP_ChIP_ZNF426_HEK293_ENCSR841VYM_counts_pattern_0.n_8772-vs-ZNF426-201.alignment counts-znf_b1h_alignment/ZNF426-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF426-201/pos_patterns.ENCSR224NFP_ChIP_ZNF426_HEK293_ENCSR841VYM_counts_pattern_1.n_395-vs-ZNF426-201.alignment counts-znf_b1h_alignment/ZNF426-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF426-201/pos_patterns.ENCSR224NFP_ChIP_ZNF426_HEK293_ENCSR841VYM_counts_pattern_2.n_29-vs-ZNF426-201.alignment counts-znf_b1h_alignment/ZNF426-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF426-201/pos_patterns.ENCSR224NFP_ChIP_ZNF426_HEK293_ENCSR841VYM_counts_pattern_3.n_23-vs-ZNF426-201.alignment counts-znf_b1h_alignment/ZNF426-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF426-201/pos_patterns.ENCSR224NFP_ChIP_ZNF426_HEK293_ENCSR841VYM_counts_pattern_4.n_20-vs-ZNF426-201.alignment counts-znf_b1h_alignment/ZNF426-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF429-201/ChipExo_models_ZNF429_counts-pos.pattern_0.n_5917-vs-ZNF429-201.alignment counts-znf_b1h_alignment/ZNF429-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF429-201/ChipExo_models_ZNF429_counts-pos.pattern_1.n_1169-vs-ZNF429-201.alignment counts-znf_b1h_alignment/ZNF429-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF429-201/ChipExo_models_ZNF429_counts-pos.pattern_2.n_1066-vs-ZNF429-201.alignment counts-znf_b1h_alignment/ZNF429-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF429-201/ChipExo_models_ZNF429_counts-pos.pattern_3.n_382-vs-ZNF429-201.alignment counts-znf_b1h_alignment/ZNF429-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF429-201/ChipExo_models_ZNF429_counts-pos.pattern_4.n_170-vs-ZNF429-201.alignment counts-znf_b1h_alignment/ZNF429-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF429-201/ChipExo_models_ZNF429_counts-pos.pattern_5.n_167-vs-ZNF429-201.alignment counts-znf_b1h_alignment/ZNF429-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF429-201/ChipExo_models_ZNF429_counts-pos.pattern_6.n_49-vs-ZNF429-201.alignment counts-znf_b1h_alignment/ZNF429-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF429-201/ChipExo_models_ZNF429_counts-pos.pattern_7.n_37-vs-ZNF429-201.alignment counts-znf_b1h_alignment/ZNF429-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF430-201/ChipExo_models_ZNF430_counts-pos.pattern_0.n_740-vs-ZNF430-201.alignment counts-znf_b1h_alignment/ZNF430-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF430-201/ChipExo_models_ZNF430_counts-pos.pattern_1.n_62-vs-ZNF430-201.alignment counts-znf_b1h_alignment/ZNF430-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF430-201/pos_patterns.ENCSR618END_ChIP_ZNF430_HepG2_ENCSR278QPL_counts_pattern_0.n_3148-vs-ZNF430-201.alignment counts-znf_b1h_alignment/ZNF430-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF430-201/pos_patterns.ENCSR618END_ChIP_ZNF430_HepG2_ENCSR278QPL_counts_pattern_10.n_343-vs-ZNF430-201.alignment counts-znf_b1h_alignment/ZNF430-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF430-201/pos_patterns.ENCSR618END_ChIP_ZNF430_HepG2_ENCSR278QPL_counts_pattern_11.n_221-vs-ZNF430-201.alignment counts-znf_b1h_alignment/ZNF430-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF430-201/pos_patterns.ENCSR618END_ChIP_ZNF430_HepG2_ENCSR278QPL_counts_pattern_12.n_162-vs-ZNF430-201.alignment counts-znf_b1h_alignment/ZNF430-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF430-201/pos_patterns.ENCSR618END_ChIP_ZNF430_HepG2_ENCSR278QPL_counts_pattern_13.n_155-vs-ZNF430-201.alignment counts-znf_b1h_alignment/ZNF430-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF430-201/pos_patterns.ENCSR618END_ChIP_ZNF430_HepG2_ENCSR278QPL_counts_pattern_14.n_149-vs-ZNF430-201.alignment counts-znf_b1h_alignment/ZNF430-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF430-201/pos_patterns.ENCSR618END_ChIP_ZNF430_HepG2_ENCSR278QPL_counts_pattern_15.n_63-vs-ZNF430-201.alignment counts-znf_b1h_alignment/ZNF430-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF430-201/pos_patterns.ENCSR618END_ChIP_ZNF430_HepG2_ENCSR278QPL_counts_pattern_16.n_55-vs-ZNF430-201.alignment counts-znf_b1h_alignment/ZNF430-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF430-201/pos_patterns.ENCSR618END_ChIP_ZNF430_HepG2_ENCSR278QPL_counts_pattern_17.n_48-vs-ZNF430-201.alignment counts-znf_b1h_alignment/ZNF430-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF430-201/pos_patterns.ENCSR618END_ChIP_ZNF430_HepG2_ENCSR278QPL_counts_pattern_18.n_20-vs-ZNF430-201.alignment counts-znf_b1h_alignment/ZNF430-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF430-201/pos_patterns.ENCSR618END_ChIP_ZNF430_HepG2_ENCSR278QPL_counts_pattern_1.n_2978-vs-ZNF430-201.alignment counts-znf_b1h_alignment/ZNF430-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF430-201/pos_patterns.ENCSR618END_ChIP_ZNF430_HepG2_ENCSR278QPL_counts_pattern_2.n_2753-vs-ZNF430-201.alignment counts-znf_b1h_alignment/ZNF430-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF430-201/pos_patterns.ENCSR618END_ChIP_ZNF430_HepG2_ENCSR278QPL_counts_pattern_3.n_985-vs-ZNF430-201.alignment counts-znf_b1h_alignment/ZNF430-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF430-201/pos_patterns.ENCSR618END_ChIP_ZNF430_HepG2_ENCSR278QPL_counts_pattern_4.n_765-vs-ZNF430-201.alignment counts-znf_b1h_alignment/ZNF430-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF430-201/pos_patterns.ENCSR618END_ChIP_ZNF430_HepG2_ENCSR278QPL_counts_pattern_5.n_649-vs-ZNF430-201.alignment counts-znf_b1h_alignment/ZNF430-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF430-201/pos_patterns.ENCSR618END_ChIP_ZNF430_HepG2_ENCSR278QPL_counts_pattern_6.n_594-vs-ZNF430-201.alignment counts-znf_b1h_alignment/ZNF430-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF430-201/pos_patterns.ENCSR618END_ChIP_ZNF430_HepG2_ENCSR278QPL_counts_pattern_7.n_508-vs-ZNF430-201.alignment counts-znf_b1h_alignment/ZNF430-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF430-201/pos_patterns.ENCSR618END_ChIP_ZNF430_HepG2_ENCSR278QPL_counts_pattern_8.n_464-vs-ZNF430-201.alignment counts-znf_b1h_alignment/ZNF430-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF430-201/pos_patterns.ENCSR618END_ChIP_ZNF430_HepG2_ENCSR278QPL_counts_pattern_9.n_446-vs-ZNF430-201.alignment counts-znf_b1h_alignment/ZNF430-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF431-201/ChipExo_models_ZNF431_counts-pos.pattern_0.n_275-vs-ZNF431-201.alignment counts-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF431-201/ChipExo_models_ZNF431_counts-pos.pattern_1.n_181-vs-ZNF431-201.alignment counts-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF431-201/neg_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_counts_pattern_0.n_49-vs-ZNF431-201.alignment counts-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF431-201/neg_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_counts_pattern_1.n_44-vs-ZNF431-201.alignment counts-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF431-201/neg_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_counts_pattern_2.n_25-vs-ZNF431-201.alignment counts-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF431-201/pos_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_counts_pattern_0.n_1324-vs-ZNF431-201.alignment counts-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF431-201/pos_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_counts_pattern_10.n_176-vs-ZNF431-201.alignment counts-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF431-201/pos_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_counts_pattern_11.n_122-vs-ZNF431-201.alignment counts-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF431-201/pos_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_counts_pattern_12.n_119-vs-ZNF431-201.alignment counts-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF431-201/pos_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_counts_pattern_13.n_102-vs-ZNF431-201.alignment counts-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF431-201/pos_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_counts_pattern_14.n_96-vs-ZNF431-201.alignment counts-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF431-201/pos_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_counts_pattern_15.n_92-vs-ZNF431-201.alignment counts-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF431-201/pos_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_counts_pattern_16.n_79-vs-ZNF431-201.alignment counts-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF431-201/pos_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_counts_pattern_17.n_72-vs-ZNF431-201.alignment counts-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF431-201/pos_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_counts_pattern_18.n_69-vs-ZNF431-201.alignment counts-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF431-201/pos_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_counts_pattern_19.n_65-vs-ZNF431-201.alignment counts-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF431-201/pos_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_counts_pattern_1.n_1315-vs-ZNF431-201.alignment counts-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF431-201/pos_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_counts_pattern_20.n_63-vs-ZNF431-201.alignment counts-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF431-201/pos_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_counts_pattern_21.n_58-vs-ZNF431-201.alignment counts-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF431-201/pos_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_counts_pattern_22.n_38-vs-ZNF431-201.alignment counts-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF431-201/pos_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_counts_pattern_23.n_24-vs-ZNF431-201.alignment counts-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF431-201/pos_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_counts_pattern_2.n_770-vs-ZNF431-201.alignment counts-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF431-201/pos_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_counts_pattern_3.n_663-vs-ZNF431-201.alignment counts-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF431-201/pos_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_counts_pattern_4.n_640-vs-ZNF431-201.alignment counts-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF431-201/pos_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_counts_pattern_5.n_338-vs-ZNF431-201.alignment counts-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF431-201/pos_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_counts_pattern_6.n_300-vs-ZNF431-201.alignment counts-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF431-201/pos_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_counts_pattern_7.n_280-vs-ZNF431-201.alignment counts-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF431-201/pos_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_counts_pattern_8.n_280-vs-ZNF431-201.alignment counts-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF431-201/pos_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_counts_pattern_9.n_213-vs-ZNF431-201.alignment counts-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF431-201/pos_patterns.ENCSR609ZLF_ChIP_ZNF431_K562_ENCSR671RWE_counts_pattern_0.n_2811-vs-ZNF431-201.alignment counts-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF431-201/pos_patterns.ENCSR609ZLF_ChIP_ZNF431_K562_ENCSR671RWE_counts_pattern_10.n_25-vs-ZNF431-201.alignment counts-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF431-201/pos_patterns.ENCSR609ZLF_ChIP_ZNF431_K562_ENCSR671RWE_counts_pattern_11.n_20-vs-ZNF431-201.alignment counts-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF431-201/pos_patterns.ENCSR609ZLF_ChIP_ZNF431_K562_ENCSR671RWE_counts_pattern_1.n_1448-vs-ZNF431-201.alignment counts-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF431-201/pos_patterns.ENCSR609ZLF_ChIP_ZNF431_K562_ENCSR671RWE_counts_pattern_2.n_184-vs-ZNF431-201.alignment counts-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF431-201/pos_patterns.ENCSR609ZLF_ChIP_ZNF431_K562_ENCSR671RWE_counts_pattern_3.n_148-vs-ZNF431-201.alignment counts-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF431-201/pos_patterns.ENCSR609ZLF_ChIP_ZNF431_K562_ENCSR671RWE_counts_pattern_4.n_56-vs-ZNF431-201.alignment counts-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF431-201/pos_patterns.ENCSR609ZLF_ChIP_ZNF431_K562_ENCSR671RWE_counts_pattern_5.n_54-vs-ZNF431-201.alignment counts-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF431-201/pos_patterns.ENCSR609ZLF_ChIP_ZNF431_K562_ENCSR671RWE_counts_pattern_6.n_40-vs-ZNF431-201.alignment counts-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF431-201/pos_patterns.ENCSR609ZLF_ChIP_ZNF431_K562_ENCSR671RWE_counts_pattern_7.n_38-vs-ZNF431-201.alignment counts-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF431-201/pos_patterns.ENCSR609ZLF_ChIP_ZNF431_K562_ENCSR671RWE_counts_pattern_8.n_29-vs-ZNF431-201.alignment counts-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF431-201/pos_patterns.ENCSR609ZLF_ChIP_ZNF431_K562_ENCSR671RWE_counts_pattern_9.n_28-vs-ZNF431-201.alignment counts-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF432-201/ChipExo_models_ZNF432_counts-pos.pattern_0.n_318-vs-ZNF432-201.alignment counts-znf_b1h_alignment/ZNF432-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF432-201/ChipExo_models_ZNF432_counts-pos.pattern_1.n_37-vs-ZNF432-201.alignment counts-znf_b1h_alignment/ZNF432-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF432-201/pos_patterns.ENCSR043VRG_ChIP_ZNF432_HepG2_ENCSR827PYQ_counts_pattern_0.n_132-vs-ZNF432-201.alignment counts-znf_b1h_alignment/ZNF432-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF432-201/pos_patterns.ENCSR043VRG_ChIP_ZNF432_HepG2_ENCSR827PYQ_counts_pattern_10.n_49-vs-ZNF432-201.alignment counts-znf_b1h_alignment/ZNF432-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF432-201/pos_patterns.ENCSR043VRG_ChIP_ZNF432_HepG2_ENCSR827PYQ_counts_pattern_11.n_46-vs-ZNF432-201.alignment counts-znf_b1h_alignment/ZNF432-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF432-201/pos_patterns.ENCSR043VRG_ChIP_ZNF432_HepG2_ENCSR827PYQ_counts_pattern_12.n_22-vs-ZNF432-201.alignment counts-znf_b1h_alignment/ZNF432-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF432-201/pos_patterns.ENCSR043VRG_ChIP_ZNF432_HepG2_ENCSR827PYQ_counts_pattern_1.n_96-vs-ZNF432-201.alignment counts-znf_b1h_alignment/ZNF432-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF432-201/pos_patterns.ENCSR043VRG_ChIP_ZNF432_HepG2_ENCSR827PYQ_counts_pattern_2.n_90-vs-ZNF432-201.alignment counts-znf_b1h_alignment/ZNF432-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF432-201/pos_patterns.ENCSR043VRG_ChIP_ZNF432_HepG2_ENCSR827PYQ_counts_pattern_3.n_89-vs-ZNF432-201.alignment counts-znf_b1h_alignment/ZNF432-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF432-201/pos_patterns.ENCSR043VRG_ChIP_ZNF432_HepG2_ENCSR827PYQ_counts_pattern_4.n_88-vs-ZNF432-201.alignment counts-znf_b1h_alignment/ZNF432-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF432-201/pos_patterns.ENCSR043VRG_ChIP_ZNF432_HepG2_ENCSR827PYQ_counts_pattern_5.n_75-vs-ZNF432-201.alignment counts-znf_b1h_alignment/ZNF432-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF432-201/pos_patterns.ENCSR043VRG_ChIP_ZNF432_HepG2_ENCSR827PYQ_counts_pattern_6.n_68-vs-ZNF432-201.alignment counts-znf_b1h_alignment/ZNF432-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF432-201/pos_patterns.ENCSR043VRG_ChIP_ZNF432_HepG2_ENCSR827PYQ_counts_pattern_7.n_60-vs-ZNF432-201.alignment counts-znf_b1h_alignment/ZNF432-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF432-201/pos_patterns.ENCSR043VRG_ChIP_ZNF432_HepG2_ENCSR827PYQ_counts_pattern_8.n_50-vs-ZNF432-201.alignment counts-znf_b1h_alignment/ZNF432-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF432-201/pos_patterns.ENCSR043VRG_ChIP_ZNF432_HepG2_ENCSR827PYQ_counts_pattern_9.n_50-vs-ZNF432-201.alignment counts-znf_b1h_alignment/ZNF432-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF433-201/ChipExo_models_ZNF433_counts-pos.pattern_0.n_1132-vs-ZNF433-201.alignment counts-znf_b1h_alignment/ZNF433-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF433-201/ChipExo_models_ZNF433_counts-pos.pattern_1.n_98-vs-ZNF433-201.alignment counts-znf_b1h_alignment/ZNF433-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF433-201/ChipExo_models_ZNF433_counts-pos.pattern_2.n_23-vs-ZNF433-201.alignment counts-znf_b1h_alignment/ZNF433-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF433-201/ChipExo_models_ZNF433_counts-pos.pattern_3.n_21-vs-ZNF433-201.alignment counts-znf_b1h_alignment/ZNF433-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF433-201/pos_patterns.ENCSR586BRJ_ChIP_ZNF433_HEK293_ENCSR226ALT_counts_pattern_0.n_3218-vs-ZNF433-201.alignment counts-znf_b1h_alignment/ZNF433-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF433-201/pos_patterns.ENCSR586BRJ_ChIP_ZNF433_HEK293_ENCSR226ALT_counts_pattern_1.n_111-vs-ZNF433-201.alignment counts-znf_b1h_alignment/ZNF433-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF433-201/pos_patterns.ENCSR586BRJ_ChIP_ZNF433_HEK293_ENCSR226ALT_counts_pattern_2.n_78-vs-ZNF433-201.alignment counts-znf_b1h_alignment/ZNF433-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF433-201/pos_patterns.ENCSR586BRJ_ChIP_ZNF433_HEK293_ENCSR226ALT_counts_pattern_3.n_22-vs-ZNF433-201.alignment counts-znf_b1h_alignment/ZNF433-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF436-201/Hughes_GR_models_ZNF436_counts-neg.pattern_0.n_235-vs-ZNF436-201.alignment counts-znf_b1h_alignment/ZNF436-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF436-201/Hughes_GR_models_ZNF436_counts-neg.pattern_1.n_47-vs-ZNF436-201.alignment counts-znf_b1h_alignment/ZNF436-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF436-201/Hughes_GR_models_ZNF436_counts-neg.pattern_2.n_39-vs-ZNF436-201.alignment counts-znf_b1h_alignment/ZNF436-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF436-201/Hughes_GR_models_ZNF436_counts-neg.pattern_3.n_37-vs-ZNF436-201.alignment counts-znf_b1h_alignment/ZNF436-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF436-201/Hughes_GR_models_ZNF436_counts-neg.pattern_4.n_33-vs-ZNF436-201.alignment counts-znf_b1h_alignment/ZNF436-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF436-201/Hughes_GR_models_ZNF436_counts-neg.pattern_5.n_33-vs-ZNF436-201.alignment counts-znf_b1h_alignment/ZNF436-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF436-201/Hughes_GR_models_ZNF436_counts-neg.pattern_6.n_29-vs-ZNF436-201.alignment counts-znf_b1h_alignment/ZNF436-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF436-201/Hughes_GR_models_ZNF436_counts-neg.pattern_7.n_22-vs-ZNF436-201.alignment counts-znf_b1h_alignment/ZNF436-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF436-201/Hughes_GR_models_ZNF436_counts-pos.pattern_0.n_3658-vs-ZNF436-201.alignment counts-znf_b1h_alignment/ZNF436-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF436-201/pos_patterns.ENCSR335SUD_ChIP_ZNF436_K562_ENCSR659IWQ_counts_pattern_0.n_1096-vs-ZNF436-201.alignment counts-znf_b1h_alignment/ZNF436-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF436-201/pos_patterns.ENCSR335SUD_ChIP_ZNF436_K562_ENCSR659IWQ_counts_pattern_1.n_44-vs-ZNF436-201.alignment counts-znf_b1h_alignment/ZNF436-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF440-201/ChipExo_models_ZNF440_counts-pos.pattern_0.n_2689-vs-ZNF440-201.alignment counts-znf_b1h_alignment/ZNF440-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF440-201/ChipExo_models_ZNF440_counts-pos.pattern_1.n_31-vs-ZNF440-201.alignment counts-znf_b1h_alignment/ZNF440-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF441-201/ChipExo_models_ZNF441_counts-pos.pattern_0.n_4656-vs-ZNF441-201.alignment counts-znf_b1h_alignment/ZNF441-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF441-201/ChipExo_models_ZNF441_counts-pos.pattern_1.n_75-vs-ZNF441-201.alignment counts-znf_b1h_alignment/ZNF441-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF441-201/ChipExo_models_ZNF441_counts-pos.pattern_2.n_38-vs-ZNF441-201.alignment counts-znf_b1h_alignment/ZNF441-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF441-201/ChipExo_models_ZNF441_counts-pos.pattern_3.n_20-vs-ZNF441-201.alignment counts-znf_b1h_alignment/ZNF441-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF441-201/neg_patterns.ENCSR673GDQ_ChIP_ZNF441_HepG2_ENCSR071CNE_counts_pattern_0.n_46-vs-ZNF441-201.alignment counts-znf_b1h_alignment/ZNF441-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF441-201/neg_patterns.ENCSR673GDQ_ChIP_ZNF441_HepG2_ENCSR071CNE_counts_pattern_1.n_33-vs-ZNF441-201.alignment counts-znf_b1h_alignment/ZNF441-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF441-201/pos_patterns.ENCSR673GDQ_ChIP_ZNF441_HepG2_ENCSR071CNE_counts_pattern_0.n_4041-vs-ZNF441-201.alignment counts-znf_b1h_alignment/ZNF441-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF441-201/pos_patterns.ENCSR673GDQ_ChIP_ZNF441_HepG2_ENCSR071CNE_counts_pattern_10.n_100-vs-ZNF441-201.alignment counts-znf_b1h_alignment/ZNF441-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF441-201/pos_patterns.ENCSR673GDQ_ChIP_ZNF441_HepG2_ENCSR071CNE_counts_pattern_11.n_96-vs-ZNF441-201.alignment counts-znf_b1h_alignment/ZNF441-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF441-201/pos_patterns.ENCSR673GDQ_ChIP_ZNF441_HepG2_ENCSR071CNE_counts_pattern_12.n_76-vs-ZNF441-201.alignment counts-znf_b1h_alignment/ZNF441-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF441-201/pos_patterns.ENCSR673GDQ_ChIP_ZNF441_HepG2_ENCSR071CNE_counts_pattern_13.n_64-vs-ZNF441-201.alignment counts-znf_b1h_alignment/ZNF441-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF441-201/pos_patterns.ENCSR673GDQ_ChIP_ZNF441_HepG2_ENCSR071CNE_counts_pattern_14.n_52-vs-ZNF441-201.alignment counts-znf_b1h_alignment/ZNF441-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF441-201/pos_patterns.ENCSR673GDQ_ChIP_ZNF441_HepG2_ENCSR071CNE_counts_pattern_15.n_44-vs-ZNF441-201.alignment counts-znf_b1h_alignment/ZNF441-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF441-201/pos_patterns.ENCSR673GDQ_ChIP_ZNF441_HepG2_ENCSR071CNE_counts_pattern_16.n_30-vs-ZNF441-201.alignment counts-znf_b1h_alignment/ZNF441-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF441-201/pos_patterns.ENCSR673GDQ_ChIP_ZNF441_HepG2_ENCSR071CNE_counts_pattern_17.n_28-vs-ZNF441-201.alignment counts-znf_b1h_alignment/ZNF441-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF441-201/pos_patterns.ENCSR673GDQ_ChIP_ZNF441_HepG2_ENCSR071CNE_counts_pattern_1.n_2003-vs-ZNF441-201.alignment counts-znf_b1h_alignment/ZNF441-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF441-201/pos_patterns.ENCSR673GDQ_ChIP_ZNF441_HepG2_ENCSR071CNE_counts_pattern_2.n_1454-vs-ZNF441-201.alignment counts-znf_b1h_alignment/ZNF441-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF441-201/pos_patterns.ENCSR673GDQ_ChIP_ZNF441_HepG2_ENCSR071CNE_counts_pattern_3.n_754-vs-ZNF441-201.alignment counts-znf_b1h_alignment/ZNF441-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF441-201/pos_patterns.ENCSR673GDQ_ChIP_ZNF441_HepG2_ENCSR071CNE_counts_pattern_4.n_487-vs-ZNF441-201.alignment counts-znf_b1h_alignment/ZNF441-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF441-201/pos_patterns.ENCSR673GDQ_ChIP_ZNF441_HepG2_ENCSR071CNE_counts_pattern_5.n_472-vs-ZNF441-201.alignment counts-znf_b1h_alignment/ZNF441-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF441-201/pos_patterns.ENCSR673GDQ_ChIP_ZNF441_HepG2_ENCSR071CNE_counts_pattern_6.n_234-vs-ZNF441-201.alignment counts-znf_b1h_alignment/ZNF441-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF441-201/pos_patterns.ENCSR673GDQ_ChIP_ZNF441_HepG2_ENCSR071CNE_counts_pattern_7.n_230-vs-ZNF441-201.alignment counts-znf_b1h_alignment/ZNF441-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF441-201/pos_patterns.ENCSR673GDQ_ChIP_ZNF441_HepG2_ENCSR071CNE_counts_pattern_8.n_169-vs-ZNF441-201.alignment counts-znf_b1h_alignment/ZNF441-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF441-201/pos_patterns.ENCSR673GDQ_ChIP_ZNF441_HepG2_ENCSR071CNE_counts_pattern_9.n_163-vs-ZNF441-201.alignment counts-znf_b1h_alignment/ZNF441-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/ChipExo_models_ZNF44_counts-pos.pattern_0.n_2513-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/ChipExo_models_ZNF44_counts-pos.pattern_1.n_186-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/neg_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_0.n_234-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/neg_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_10.n_46-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/neg_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_11.n_46-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/neg_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_12.n_39-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/neg_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_13.n_37-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/neg_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_14.n_37-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/neg_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_15.n_37-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/neg_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_16.n_37-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/neg_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_17.n_36-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/neg_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_18.n_35-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/neg_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_19.n_35-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/neg_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_1.n_227-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/neg_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_20.n_35-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/neg_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_21.n_32-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/neg_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_22.n_31-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/neg_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_23.n_27-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/neg_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_24.n_24-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/neg_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_25.n_24-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/neg_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_26.n_22-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/neg_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_27.n_22-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/neg_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_28.n_21-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/neg_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_29.n_20-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/neg_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_2.n_166-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/neg_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_3.n_141-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/neg_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_4.n_128-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/neg_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_5.n_126-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/neg_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_6.n_99-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/neg_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_7.n_84-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/neg_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_8.n_81-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/neg_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_9.n_54-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/pos_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_0.n_1655-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/pos_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_10.n_284-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/pos_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_11.n_268-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/pos_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_12.n_261-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/pos_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_13.n_255-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/pos_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_14.n_231-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/pos_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_15.n_223-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/pos_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_16.n_215-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/pos_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_17.n_207-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/pos_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_18.n_190-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/pos_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_19.n_162-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/pos_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_1.n_886-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/pos_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_20.n_124-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/pos_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_21.n_108-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/pos_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_22.n_104-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/pos_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_23.n_103-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/pos_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_2.n_885-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/pos_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_3.n_671-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/pos_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_4.n_601-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/pos_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_5.n_573-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/pos_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_6.n_439-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/pos_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_7.n_378-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/pos_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_8.n_304-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF44-203/pos_patterns.ENCSR914HPP_ChIP_ZNF44_HepG2_ENCSR611LDB_counts_pattern_9.n_292-vs-ZNF44-203.alignment counts-znf_b1h_alignment/ZNF44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF442-201/ChipExo_models_ZNF442_counts-pos.pattern_0.n_187-vs-ZNF442-201.alignment counts-znf_b1h_alignment/ZNF442-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF442-201/ChipExo_models_ZNF442_counts-pos.pattern_1.n_29-vs-ZNF442-201.alignment counts-znf_b1h_alignment/ZNF442-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF443-201/ChipExo_models_ZNF443_counts-pos.pattern_0.n_140-vs-ZNF443-201.alignment counts-znf_b1h_alignment/ZNF443-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF443-201/ChipExo_models_ZNF443_counts-pos.pattern_1.n_30-vs-ZNF443-201.alignment counts-znf_b1h_alignment/ZNF443-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF444-201/pos_patterns.ENCSR038XIA_ChIP_ZNF444_MCF-7_ENCSR468ULA_counts_pattern_0.n_10252-vs-ZNF444-201.alignment counts-znf_b1h_alignment/ZNF444-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF444-201/pos_patterns.ENCSR038XIA_ChIP_ZNF444_MCF-7_ENCSR468ULA_counts_pattern_10.n_73-vs-ZNF444-201.alignment counts-znf_b1h_alignment/ZNF444-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF444-201/pos_patterns.ENCSR038XIA_ChIP_ZNF444_MCF-7_ENCSR468ULA_counts_pattern_11.n_52-vs-ZNF444-201.alignment counts-znf_b1h_alignment/ZNF444-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF444-201/pos_patterns.ENCSR038XIA_ChIP_ZNF444_MCF-7_ENCSR468ULA_counts_pattern_12.n_49-vs-ZNF444-201.alignment counts-znf_b1h_alignment/ZNF444-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF444-201/pos_patterns.ENCSR038XIA_ChIP_ZNF444_MCF-7_ENCSR468ULA_counts_pattern_13.n_41-vs-ZNF444-201.alignment counts-znf_b1h_alignment/ZNF444-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF444-201/pos_patterns.ENCSR038XIA_ChIP_ZNF444_MCF-7_ENCSR468ULA_counts_pattern_14.n_31-vs-ZNF444-201.alignment counts-znf_b1h_alignment/ZNF444-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF444-201/pos_patterns.ENCSR038XIA_ChIP_ZNF444_MCF-7_ENCSR468ULA_counts_pattern_15.n_31-vs-ZNF444-201.alignment counts-znf_b1h_alignment/ZNF444-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF444-201/pos_patterns.ENCSR038XIA_ChIP_ZNF444_MCF-7_ENCSR468ULA_counts_pattern_16.n_30-vs-ZNF444-201.alignment counts-znf_b1h_alignment/ZNF444-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF444-201/pos_patterns.ENCSR038XIA_ChIP_ZNF444_MCF-7_ENCSR468ULA_counts_pattern_1.n_2022-vs-ZNF444-201.alignment counts-znf_b1h_alignment/ZNF444-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF444-201/pos_patterns.ENCSR038XIA_ChIP_ZNF444_MCF-7_ENCSR468ULA_counts_pattern_2.n_1744-vs-ZNF444-201.alignment counts-znf_b1h_alignment/ZNF444-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF444-201/pos_patterns.ENCSR038XIA_ChIP_ZNF444_MCF-7_ENCSR468ULA_counts_pattern_3.n_1507-vs-ZNF444-201.alignment counts-znf_b1h_alignment/ZNF444-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF444-201/pos_patterns.ENCSR038XIA_ChIP_ZNF444_MCF-7_ENCSR468ULA_counts_pattern_4.n_752-vs-ZNF444-201.alignment counts-znf_b1h_alignment/ZNF444-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF444-201/pos_patterns.ENCSR038XIA_ChIP_ZNF444_MCF-7_ENCSR468ULA_counts_pattern_5.n_427-vs-ZNF444-201.alignment counts-znf_b1h_alignment/ZNF444-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF444-201/pos_patterns.ENCSR038XIA_ChIP_ZNF444_MCF-7_ENCSR468ULA_counts_pattern_6.n_346-vs-ZNF444-201.alignment counts-znf_b1h_alignment/ZNF444-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF444-201/pos_patterns.ENCSR038XIA_ChIP_ZNF444_MCF-7_ENCSR468ULA_counts_pattern_7.n_263-vs-ZNF444-201.alignment counts-znf_b1h_alignment/ZNF444-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF444-201/pos_patterns.ENCSR038XIA_ChIP_ZNF444_MCF-7_ENCSR468ULA_counts_pattern_8.n_186-vs-ZNF444-201.alignment counts-znf_b1h_alignment/ZNF444-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF444-201/pos_patterns.ENCSR038XIA_ChIP_ZNF444_MCF-7_ENCSR468ULA_counts_pattern_9.n_114-vs-ZNF444-201.alignment counts-znf_b1h_alignment/ZNF444-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF444-201/pos_patterns.ENCSR164RIC_ChIP_ZNF444_K562_ENCSR779BUX_counts_pattern_0.n_998-vs-ZNF444-201.alignment counts-znf_b1h_alignment/ZNF444-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF444-201/pos_patterns.ENCSR164RIC_ChIP_ZNF444_K562_ENCSR779BUX_counts_pattern_1.n_582-vs-ZNF444-201.alignment counts-znf_b1h_alignment/ZNF444-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF444-201/pos_patterns.ENCSR164RIC_ChIP_ZNF444_K562_ENCSR779BUX_counts_pattern_2.n_74-vs-ZNF444-201.alignment counts-znf_b1h_alignment/ZNF444-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF444-201/pos_patterns.ENCSR164RIC_ChIP_ZNF444_K562_ENCSR779BUX_counts_pattern_3.n_53-vs-ZNF444-201.alignment counts-znf_b1h_alignment/ZNF444-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF445-201/ChipExo_models_ZNF445_counts-neg.pattern_0.n_36-vs-ZNF445-201.alignment counts-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF445-201/ChipExo_models_ZNF445_counts-neg.pattern_1.n_30-vs-ZNF445-201.alignment counts-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF445-201/ChipExo_models_ZNF445_counts-neg.pattern_2.n_25-vs-ZNF445-201.alignment counts-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF445-201/ChipExo_models_ZNF445_counts-pos.pattern_0.n_431-vs-ZNF445-201.alignment counts-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF445-201/ChipExo_models_ZNF445_counts-pos.pattern_10.n_78-vs-ZNF445-201.alignment counts-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF445-201/ChipExo_models_ZNF445_counts-pos.pattern_11.n_77-vs-ZNF445-201.alignment counts-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF445-201/ChipExo_models_ZNF445_counts-pos.pattern_12.n_75-vs-ZNF445-201.alignment counts-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF445-201/ChipExo_models_ZNF445_counts-pos.pattern_13.n_74-vs-ZNF445-201.alignment counts-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF445-201/ChipExo_models_ZNF445_counts-pos.pattern_14.n_72-vs-ZNF445-201.alignment counts-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF445-201/ChipExo_models_ZNF445_counts-pos.pattern_15.n_56-vs-ZNF445-201.alignment counts-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF445-201/ChipExo_models_ZNF445_counts-pos.pattern_16.n_54-vs-ZNF445-201.alignment counts-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF445-201/ChipExo_models_ZNF445_counts-pos.pattern_17.n_52-vs-ZNF445-201.alignment counts-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF445-201/ChipExo_models_ZNF445_counts-pos.pattern_18.n_52-vs-ZNF445-201.alignment counts-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF445-201/ChipExo_models_ZNF445_counts-pos.pattern_19.n_46-vs-ZNF445-201.alignment counts-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF445-201/ChipExo_models_ZNF445_counts-pos.pattern_1.n_174-vs-ZNF445-201.alignment counts-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF445-201/ChipExo_models_ZNF445_counts-pos.pattern_20.n_42-vs-ZNF445-201.alignment counts-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF445-201/ChipExo_models_ZNF445_counts-pos.pattern_21.n_41-vs-ZNF445-201.alignment counts-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF445-201/ChipExo_models_ZNF445_counts-pos.pattern_22.n_28-vs-ZNF445-201.alignment counts-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF445-201/ChipExo_models_ZNF445_counts-pos.pattern_23.n_27-vs-ZNF445-201.alignment counts-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF445-201/ChipExo_models_ZNF445_counts-pos.pattern_2.n_150-vs-ZNF445-201.alignment counts-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF445-201/ChipExo_models_ZNF445_counts-pos.pattern_3.n_145-vs-ZNF445-201.alignment counts-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF445-201/ChipExo_models_ZNF445_counts-pos.pattern_4.n_131-vs-ZNF445-201.alignment counts-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF445-201/ChipExo_models_ZNF445_counts-pos.pattern_5.n_108-vs-ZNF445-201.alignment counts-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF445-201/ChipExo_models_ZNF445_counts-pos.pattern_6.n_107-vs-ZNF445-201.alignment counts-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF445-201/ChipExo_models_ZNF445_counts-pos.pattern_7.n_103-vs-ZNF445-201.alignment counts-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF445-201/ChipExo_models_ZNF445_counts-pos.pattern_8.n_102-vs-ZNF445-201.alignment counts-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF445-201/ChipExo_models_ZNF445_counts-pos.pattern_9.n_80-vs-ZNF445-201.alignment counts-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF445-201/pos_patterns.ENCSR883UGG_ChIP_ZNF445_K562_ENCSR082FMG_counts_pattern_0.n_495-vs-ZNF445-201.alignment counts-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF445-201/pos_patterns.ENCSR883UGG_ChIP_ZNF445_K562_ENCSR082FMG_counts_pattern_10.n_20-vs-ZNF445-201.alignment counts-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF445-201/pos_patterns.ENCSR883UGG_ChIP_ZNF445_K562_ENCSR082FMG_counts_pattern_1.n_102-vs-ZNF445-201.alignment counts-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF445-201/pos_patterns.ENCSR883UGG_ChIP_ZNF445_K562_ENCSR082FMG_counts_pattern_2.n_77-vs-ZNF445-201.alignment counts-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF445-201/pos_patterns.ENCSR883UGG_ChIP_ZNF445_K562_ENCSR082FMG_counts_pattern_3.n_76-vs-ZNF445-201.alignment counts-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF445-201/pos_patterns.ENCSR883UGG_ChIP_ZNF445_K562_ENCSR082FMG_counts_pattern_4.n_72-vs-ZNF445-201.alignment counts-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF445-201/pos_patterns.ENCSR883UGG_ChIP_ZNF445_K562_ENCSR082FMG_counts_pattern_5.n_57-vs-ZNF445-201.alignment counts-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF445-201/pos_patterns.ENCSR883UGG_ChIP_ZNF445_K562_ENCSR082FMG_counts_pattern_6.n_50-vs-ZNF445-201.alignment counts-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF445-201/pos_patterns.ENCSR883UGG_ChIP_ZNF445_K562_ENCSR082FMG_counts_pattern_7.n_30-vs-ZNF445-201.alignment counts-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF445-201/pos_patterns.ENCSR883UGG_ChIP_ZNF445_K562_ENCSR082FMG_counts_pattern_8.n_28-vs-ZNF445-201.alignment counts-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF445-201/pos_patterns.ENCSR883UGG_ChIP_ZNF445_K562_ENCSR082FMG_counts_pattern_9.n_26-vs-ZNF445-201.alignment counts-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-202/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_0.n_1806-vs-ZNF446-202.alignment counts-znf_b1h_alignment/ZNF446-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-202/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_10.n_47-vs-ZNF446-202.alignment counts-znf_b1h_alignment/ZNF446-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-202/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_11.n_46-vs-ZNF446-202.alignment counts-znf_b1h_alignment/ZNF446-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-202/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_12.n_32-vs-ZNF446-202.alignment counts-znf_b1h_alignment/ZNF446-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-202/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_13.n_28-vs-ZNF446-202.alignment counts-znf_b1h_alignment/ZNF446-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-202/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_14.n_25-vs-ZNF446-202.alignment counts-znf_b1h_alignment/ZNF446-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-202/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_1.n_1518-vs-ZNF446-202.alignment counts-znf_b1h_alignment/ZNF446-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-202/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_2.n_1239-vs-ZNF446-202.alignment counts-znf_b1h_alignment/ZNF446-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-202/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_3.n_1157-vs-ZNF446-202.alignment counts-znf_b1h_alignment/ZNF446-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-202/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_4.n_280-vs-ZNF446-202.alignment counts-znf_b1h_alignment/ZNF446-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-202/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_5.n_246-vs-ZNF446-202.alignment counts-znf_b1h_alignment/ZNF446-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-202/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_6.n_188-vs-ZNF446-202.alignment counts-znf_b1h_alignment/ZNF446-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-202/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_7.n_103-vs-ZNF446-202.alignment counts-znf_b1h_alignment/ZNF446-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-202/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_8.n_92-vs-ZNF446-202.alignment counts-znf_b1h_alignment/ZNF446-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-202/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_9.n_52-vs-ZNF446-202.alignment counts-znf_b1h_alignment/ZNF446-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-203/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_0.n_1806-vs-ZNF446-203.alignment counts-znf_b1h_alignment/ZNF446-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-203/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_10.n_47-vs-ZNF446-203.alignment counts-znf_b1h_alignment/ZNF446-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-203/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_11.n_46-vs-ZNF446-203.alignment counts-znf_b1h_alignment/ZNF446-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-203/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_12.n_32-vs-ZNF446-203.alignment counts-znf_b1h_alignment/ZNF446-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-203/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_13.n_28-vs-ZNF446-203.alignment counts-znf_b1h_alignment/ZNF446-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-203/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_14.n_25-vs-ZNF446-203.alignment counts-znf_b1h_alignment/ZNF446-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-203/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_1.n_1518-vs-ZNF446-203.alignment counts-znf_b1h_alignment/ZNF446-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-203/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_2.n_1239-vs-ZNF446-203.alignment counts-znf_b1h_alignment/ZNF446-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-203/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_3.n_1157-vs-ZNF446-203.alignment counts-znf_b1h_alignment/ZNF446-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-203/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_4.n_280-vs-ZNF446-203.alignment counts-znf_b1h_alignment/ZNF446-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-203/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_5.n_246-vs-ZNF446-203.alignment counts-znf_b1h_alignment/ZNF446-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-203/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_6.n_188-vs-ZNF446-203.alignment counts-znf_b1h_alignment/ZNF446-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-203/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_7.n_103-vs-ZNF446-203.alignment counts-znf_b1h_alignment/ZNF446-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-203/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_8.n_92-vs-ZNF446-203.alignment counts-znf_b1h_alignment/ZNF446-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-203/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_9.n_52-vs-ZNF446-203.alignment counts-znf_b1h_alignment/ZNF446-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-207/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_0.n_1806-vs-ZNF446-207.alignment counts-znf_b1h_alignment/ZNF446-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-207/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_10.n_47-vs-ZNF446-207.alignment counts-znf_b1h_alignment/ZNF446-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-207/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_11.n_46-vs-ZNF446-207.alignment counts-znf_b1h_alignment/ZNF446-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-207/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_12.n_32-vs-ZNF446-207.alignment counts-znf_b1h_alignment/ZNF446-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-207/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_13.n_28-vs-ZNF446-207.alignment counts-znf_b1h_alignment/ZNF446-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-207/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_14.n_25-vs-ZNF446-207.alignment counts-znf_b1h_alignment/ZNF446-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-207/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_1.n_1518-vs-ZNF446-207.alignment counts-znf_b1h_alignment/ZNF446-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-207/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_2.n_1239-vs-ZNF446-207.alignment counts-znf_b1h_alignment/ZNF446-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-207/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_3.n_1157-vs-ZNF446-207.alignment counts-znf_b1h_alignment/ZNF446-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-207/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_4.n_280-vs-ZNF446-207.alignment counts-znf_b1h_alignment/ZNF446-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-207/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_5.n_246-vs-ZNF446-207.alignment counts-znf_b1h_alignment/ZNF446-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-207/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_6.n_188-vs-ZNF446-207.alignment counts-znf_b1h_alignment/ZNF446-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-207/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_7.n_103-vs-ZNF446-207.alignment counts-znf_b1h_alignment/ZNF446-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-207/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_8.n_92-vs-ZNF446-207.alignment counts-znf_b1h_alignment/ZNF446-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF446-207/pos_patterns.ENCSR839AJZ_ChIP_ZNF446_HepG2_ENCSR290YDF_counts_pattern_9.n_52-vs-ZNF446-207.alignment counts-znf_b1h_alignment/ZNF446-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF449-201/Hughes_GR_models_ZNF449_counts-pos.pattern_0.n_1530-vs-ZNF449-201.alignment counts-znf_b1h_alignment/ZNF449-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF449-201/Hughes_GR_models_ZNF449_counts-pos.pattern_1.n_108-vs-ZNF449-201.alignment counts-znf_b1h_alignment/ZNF449-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF449-201/pos_patterns.ENCSR659YWQ_ChIP_ZNF449_K562_ENCSR040FUU_counts_pattern_0.n_1858-vs-ZNF449-201.alignment counts-znf_b1h_alignment/ZNF449-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF449-201/pos_patterns.ENCSR659YWQ_ChIP_ZNF449_K562_ENCSR040FUU_counts_pattern_1.n_1289-vs-ZNF449-201.alignment counts-znf_b1h_alignment/ZNF449-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF449-201/pos_patterns.ENCSR659YWQ_ChIP_ZNF449_K562_ENCSR040FUU_counts_pattern_2.n_384-vs-ZNF449-201.alignment counts-znf_b1h_alignment/ZNF449-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF449-201/pos_patterns.ENCSR659YWQ_ChIP_ZNF449_K562_ENCSR040FUU_counts_pattern_3.n_120-vs-ZNF449-201.alignment counts-znf_b1h_alignment/ZNF449-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF449-201/pos_patterns.ENCSR659YWQ_ChIP_ZNF449_K562_ENCSR040FUU_counts_pattern_4.n_108-vs-ZNF449-201.alignment counts-znf_b1h_alignment/ZNF449-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF449-201/pos_patterns.ENCSR659YWQ_ChIP_ZNF449_K562_ENCSR040FUU_counts_pattern_5.n_101-vs-ZNF449-201.alignment counts-znf_b1h_alignment/ZNF449-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF449-201/pos_patterns.ENCSR659YWQ_ChIP_ZNF449_K562_ENCSR040FUU_counts_pattern_6.n_84-vs-ZNF449-201.alignment counts-znf_b1h_alignment/ZNF449-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF449-201/pos_patterns.ENCSR659YWQ_ChIP_ZNF449_K562_ENCSR040FUU_counts_pattern_7.n_46-vs-ZNF449-201.alignment counts-znf_b1h_alignment/ZNF449-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF449-201/pos_patterns.ENCSR659YWQ_ChIP_ZNF449_K562_ENCSR040FUU_counts_pattern_8.n_46-vs-ZNF449-201.alignment counts-znf_b1h_alignment/ZNF449-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF449-201/pos_patterns.ENCSR659YWQ_ChIP_ZNF449_K562_ENCSR040FUU_counts_pattern_9.n_40-vs-ZNF449-201.alignment counts-znf_b1h_alignment/ZNF449-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF449-201/pos_patterns.ENCSR738SLS_ChIP_ZNF449_HEK293_ENCSR809HTU_counts_pattern_0.n_11423-vs-ZNF449-201.alignment counts-znf_b1h_alignment/ZNF449-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF449-201/pos_patterns.ENCSR738SLS_ChIP_ZNF449_HEK293_ENCSR809HTU_counts_pattern_1.n_1750-vs-ZNF449-201.alignment counts-znf_b1h_alignment/ZNF449-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF45-201/ChipExo_models_ZNF45_counts-pos.pattern_0.n_193-vs-ZNF45-201.alignment counts-znf_b1h_alignment/ZNF45-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF45-201/ChipExo_models_ZNF45_counts-pos.pattern_1.n_22-vs-ZNF45-201.alignment counts-znf_b1h_alignment/ZNF45-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF45-201/Hughes_NB_models_ZNF45_counts-neg.pattern_0.n_27-vs-ZNF45-201.alignment counts-znf_b1h_alignment/ZNF45-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF45-201/Hughes_NB_models_ZNF45_counts-neg.pattern_1.n_26-vs-ZNF45-201.alignment counts-znf_b1h_alignment/ZNF45-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF45-201/Hughes_NB_models_ZNF45_counts-neg.pattern_2.n_22-vs-ZNF45-201.alignment counts-znf_b1h_alignment/ZNF45-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF45-201/Hughes_NB_models_ZNF45_counts-pos.pattern_0.n_464-vs-ZNF45-201.alignment counts-znf_b1h_alignment/ZNF45-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF45-201/Hughes_NB_models_ZNF45_counts-pos.pattern_1.n_121-vs-ZNF45-201.alignment counts-znf_b1h_alignment/ZNF45-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF454-201/ChipExo_models_ZNF454_counts-pos.pattern_0.n_187-vs-ZNF454-201.alignment counts-znf_b1h_alignment/ZNF454-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF454-201/ChipExo_models_ZNF454_counts-pos.pattern_1.n_59-vs-ZNF454-201.alignment counts-znf_b1h_alignment/ZNF454-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF454-201/ChipExo_models_ZNF454_counts-pos.pattern_2.n_41-vs-ZNF454-201.alignment counts-znf_b1h_alignment/ZNF454-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF454-201/Hughes_GR_models_ZNF454_counts-pos.pattern_0.n_25-vs-ZNF454-201.alignment counts-znf_b1h_alignment/ZNF454-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF454-201/Hughes_NB_models_ZNF454_counts-pos.pattern_0.n_731-vs-ZNF454-201.alignment counts-znf_b1h_alignment/ZNF454-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF454-201/Hughes_NB_models_ZNF454_counts-pos.pattern_1.n_726-vs-ZNF454-201.alignment counts-znf_b1h_alignment/ZNF454-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF460-201/ChipExo_models_ZNF460_counts-pos.pattern_0.n_631-vs-ZNF460-201.alignment counts-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF460-201/ChipExo_models_ZNF460_counts-pos.pattern_1.n_334-vs-ZNF460-201.alignment counts-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF460-201/ChipExo_models_ZNF460_counts-pos.pattern_2.n_259-vs-ZNF460-201.alignment counts-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF460-201/ChipExo_models_ZNF460_counts-pos.pattern_3.n_149-vs-ZNF460-201.alignment counts-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF460-201/ChipExo_models_ZNF460_counts-pos.pattern_4.n_71-vs-ZNF460-201.alignment counts-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF460-201/ChipExo_models_ZNF460_counts-pos.pattern_5.n_53-vs-ZNF460-201.alignment counts-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF460-201/ChipExo_models_ZNF460_counts-pos.pattern_6.n_33-vs-ZNF460-201.alignment counts-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF460-201/pos_patterns.ENCSR261UIH_ChIP_ZNF460_HepG2_ENCSR849AEI_counts_pattern_0.n_11187-vs-ZNF460-201.alignment counts-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF460-201/pos_patterns.ENCSR261UIH_ChIP_ZNF460_HepG2_ENCSR849AEI_counts_pattern_10.n_41-vs-ZNF460-201.alignment counts-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF460-201/pos_patterns.ENCSR261UIH_ChIP_ZNF460_HepG2_ENCSR849AEI_counts_pattern_11.n_36-vs-ZNF460-201.alignment counts-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF460-201/pos_patterns.ENCSR261UIH_ChIP_ZNF460_HepG2_ENCSR849AEI_counts_pattern_12.n_21-vs-ZNF460-201.alignment counts-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF460-201/pos_patterns.ENCSR261UIH_ChIP_ZNF460_HepG2_ENCSR849AEI_counts_pattern_1.n_8934-vs-ZNF460-201.alignment counts-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF460-201/pos_patterns.ENCSR261UIH_ChIP_ZNF460_HepG2_ENCSR849AEI_counts_pattern_2.n_1582-vs-ZNF460-201.alignment counts-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF460-201/pos_patterns.ENCSR261UIH_ChIP_ZNF460_HepG2_ENCSR849AEI_counts_pattern_3.n_1337-vs-ZNF460-201.alignment counts-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF460-201/pos_patterns.ENCSR261UIH_ChIP_ZNF460_HepG2_ENCSR849AEI_counts_pattern_4.n_610-vs-ZNF460-201.alignment counts-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF460-201/pos_patterns.ENCSR261UIH_ChIP_ZNF460_HepG2_ENCSR849AEI_counts_pattern_5.n_152-vs-ZNF460-201.alignment counts-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF460-201/pos_patterns.ENCSR261UIH_ChIP_ZNF460_HepG2_ENCSR849AEI_counts_pattern_6.n_149-vs-ZNF460-201.alignment counts-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF460-201/pos_patterns.ENCSR261UIH_ChIP_ZNF460_HepG2_ENCSR849AEI_counts_pattern_7.n_137-vs-ZNF460-201.alignment counts-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF460-201/pos_patterns.ENCSR261UIH_ChIP_ZNF460_HepG2_ENCSR849AEI_counts_pattern_8.n_84-vs-ZNF460-201.alignment counts-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF460-201/pos_patterns.ENCSR261UIH_ChIP_ZNF460_HepG2_ENCSR849AEI_counts_pattern_9.n_53-vs-ZNF460-201.alignment counts-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF462-201/pos_patterns.ENCSR334UWP_ChIP_ZNF462_GM23338_ENCSR340TQA_counts_pattern_0.n_4077-vs-ZNF462-201.alignment counts-znf_b1h_alignment/ZNF462-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF462-201/pos_patterns.ENCSR334UWP_ChIP_ZNF462_GM23338_ENCSR340TQA_counts_pattern_10.n_23-vs-ZNF462-201.alignment counts-znf_b1h_alignment/ZNF462-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF462-201/pos_patterns.ENCSR334UWP_ChIP_ZNF462_GM23338_ENCSR340TQA_counts_pattern_11.n_21-vs-ZNF462-201.alignment counts-znf_b1h_alignment/ZNF462-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF462-201/pos_patterns.ENCSR334UWP_ChIP_ZNF462_GM23338_ENCSR340TQA_counts_pattern_1.n_3098-vs-ZNF462-201.alignment counts-znf_b1h_alignment/ZNF462-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF462-201/pos_patterns.ENCSR334UWP_ChIP_ZNF462_GM23338_ENCSR340TQA_counts_pattern_2.n_558-vs-ZNF462-201.alignment counts-znf_b1h_alignment/ZNF462-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF462-201/pos_patterns.ENCSR334UWP_ChIP_ZNF462_GM23338_ENCSR340TQA_counts_pattern_3.n_336-vs-ZNF462-201.alignment counts-znf_b1h_alignment/ZNF462-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF462-201/pos_patterns.ENCSR334UWP_ChIP_ZNF462_GM23338_ENCSR340TQA_counts_pattern_4.n_92-vs-ZNF462-201.alignment counts-znf_b1h_alignment/ZNF462-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF462-201/pos_patterns.ENCSR334UWP_ChIP_ZNF462_GM23338_ENCSR340TQA_counts_pattern_5.n_48-vs-ZNF462-201.alignment counts-znf_b1h_alignment/ZNF462-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF462-201/pos_patterns.ENCSR334UWP_ChIP_ZNF462_GM23338_ENCSR340TQA_counts_pattern_6.n_40-vs-ZNF462-201.alignment counts-znf_b1h_alignment/ZNF462-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF462-201/pos_patterns.ENCSR334UWP_ChIP_ZNF462_GM23338_ENCSR340TQA_counts_pattern_7.n_38-vs-ZNF462-201.alignment counts-znf_b1h_alignment/ZNF462-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF462-201/pos_patterns.ENCSR334UWP_ChIP_ZNF462_GM23338_ENCSR340TQA_counts_pattern_8.n_38-vs-ZNF462-201.alignment counts-znf_b1h_alignment/ZNF462-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF462-201/pos_patterns.ENCSR334UWP_ChIP_ZNF462_GM23338_ENCSR340TQA_counts_pattern_9.n_25-vs-ZNF462-201.alignment counts-znf_b1h_alignment/ZNF462-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF462-202/pos_patterns.ENCSR334UWP_ChIP_ZNF462_GM23338_ENCSR340TQA_counts_pattern_0.n_4077-vs-ZNF462-202.alignment counts-znf_b1h_alignment/ZNF462-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF462-202/pos_patterns.ENCSR334UWP_ChIP_ZNF462_GM23338_ENCSR340TQA_counts_pattern_10.n_23-vs-ZNF462-202.alignment counts-znf_b1h_alignment/ZNF462-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF462-202/pos_patterns.ENCSR334UWP_ChIP_ZNF462_GM23338_ENCSR340TQA_counts_pattern_11.n_21-vs-ZNF462-202.alignment counts-znf_b1h_alignment/ZNF462-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF462-202/pos_patterns.ENCSR334UWP_ChIP_ZNF462_GM23338_ENCSR340TQA_counts_pattern_1.n_3098-vs-ZNF462-202.alignment counts-znf_b1h_alignment/ZNF462-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF462-202/pos_patterns.ENCSR334UWP_ChIP_ZNF462_GM23338_ENCSR340TQA_counts_pattern_2.n_558-vs-ZNF462-202.alignment counts-znf_b1h_alignment/ZNF462-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF462-202/pos_patterns.ENCSR334UWP_ChIP_ZNF462_GM23338_ENCSR340TQA_counts_pattern_3.n_336-vs-ZNF462-202.alignment counts-znf_b1h_alignment/ZNF462-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF462-202/pos_patterns.ENCSR334UWP_ChIP_ZNF462_GM23338_ENCSR340TQA_counts_pattern_4.n_92-vs-ZNF462-202.alignment counts-znf_b1h_alignment/ZNF462-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF462-202/pos_patterns.ENCSR334UWP_ChIP_ZNF462_GM23338_ENCSR340TQA_counts_pattern_5.n_48-vs-ZNF462-202.alignment counts-znf_b1h_alignment/ZNF462-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF462-202/pos_patterns.ENCSR334UWP_ChIP_ZNF462_GM23338_ENCSR340TQA_counts_pattern_6.n_40-vs-ZNF462-202.alignment counts-znf_b1h_alignment/ZNF462-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF462-202/pos_patterns.ENCSR334UWP_ChIP_ZNF462_GM23338_ENCSR340TQA_counts_pattern_7.n_38-vs-ZNF462-202.alignment counts-znf_b1h_alignment/ZNF462-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF462-202/pos_patterns.ENCSR334UWP_ChIP_ZNF462_GM23338_ENCSR340TQA_counts_pattern_8.n_38-vs-ZNF462-202.alignment counts-znf_b1h_alignment/ZNF462-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF462-202/pos_patterns.ENCSR334UWP_ChIP_ZNF462_GM23338_ENCSR340TQA_counts_pattern_9.n_25-vs-ZNF462-202.alignment counts-znf_b1h_alignment/ZNF462-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF467-201/Hughes_GR_models_ZNF467_counts-pos.pattern_0.n_8626-vs-ZNF467-201.alignment counts-znf_b1h_alignment/ZNF467-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF467-201/Hughes_GR_models_ZNF467_counts-pos.pattern_1.n_4806-vs-ZNF467-201.alignment counts-znf_b1h_alignment/ZNF467-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF467-201/Hughes_GR_models_ZNF467_counts-pos.pattern_2.n_141-vs-ZNF467-201.alignment counts-znf_b1h_alignment/ZNF467-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF467-201/Hughes_GR_models_ZNF467_counts-pos.pattern_3.n_59-vs-ZNF467-201.alignment counts-znf_b1h_alignment/ZNF467-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF467-201/Hughes_NB_models_ZNF467_counts-pos.pattern_0.n_18981-vs-ZNF467-201.alignment counts-znf_b1h_alignment/ZNF467-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF467-201/Hughes_NB_models_ZNF467_counts-pos.pattern_1.n_1601-vs-ZNF467-201.alignment counts-znf_b1h_alignment/ZNF467-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF467-201/Hughes_NB_models_ZNF467_counts-pos.pattern_2.n_1192-vs-ZNF467-201.alignment counts-znf_b1h_alignment/ZNF467-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF467-201/Hughes_NB_models_ZNF467_counts-pos.pattern_3.n_66-vs-ZNF467-201.alignment counts-znf_b1h_alignment/ZNF467-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF467-201/Hughes_NB_models_ZNF467_counts-pos.pattern_4.n_30-vs-ZNF467-201.alignment counts-znf_b1h_alignment/ZNF467-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF468-201/ChipExo_models_ZNF468_counts-pos.pattern_0.n_5160-vs-ZNF468-201.alignment counts-znf_b1h_alignment/ZNF468-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF468-201/ChipExo_models_ZNF468_counts-pos.pattern_1.n_463-vs-ZNF468-201.alignment counts-znf_b1h_alignment/ZNF468-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF468-201/ChipExo_models_ZNF468_counts-pos.pattern_2.n_249-vs-ZNF468-201.alignment counts-znf_b1h_alignment/ZNF468-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF468-201/ChipExo_models_ZNF468_counts-pos.pattern_3.n_25-vs-ZNF468-201.alignment counts-znf_b1h_alignment/ZNF468-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF468-201/neg_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_counts_pattern_0.n_37-vs-ZNF468-201.alignment counts-znf_b1h_alignment/ZNF468-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF468-201/neg_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_counts_pattern_1.n_27-vs-ZNF468-201.alignment counts-znf_b1h_alignment/ZNF468-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF468-201/neg_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_counts_pattern_2.n_21-vs-ZNF468-201.alignment counts-znf_b1h_alignment/ZNF468-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF468-201/pos_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_counts_pattern_0.n_1313-vs-ZNF468-201.alignment counts-znf_b1h_alignment/ZNF468-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF468-201/pos_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_counts_pattern_1.n_1304-vs-ZNF468-201.alignment counts-znf_b1h_alignment/ZNF468-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF468-201/pos_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_counts_pattern_2.n_1218-vs-ZNF468-201.alignment counts-znf_b1h_alignment/ZNF468-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF468-201/pos_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_counts_pattern_3.n_183-vs-ZNF468-201.alignment counts-znf_b1h_alignment/ZNF468-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF468-201/pos_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_counts_pattern_4.n_182-vs-ZNF468-201.alignment counts-znf_b1h_alignment/ZNF468-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF468-201/pos_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_counts_pattern_5.n_142-vs-ZNF468-201.alignment counts-znf_b1h_alignment/ZNF468-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF468-201/pos_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_counts_pattern_6.n_131-vs-ZNF468-201.alignment counts-znf_b1h_alignment/ZNF468-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF468-201/pos_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_counts_pattern_7.n_110-vs-ZNF468-201.alignment counts-znf_b1h_alignment/ZNF468-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF468-201/pos_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_counts_pattern_8.n_97-vs-ZNF468-201.alignment counts-znf_b1h_alignment/ZNF468-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF468-201/pos_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_counts_pattern_9.n_61-vs-ZNF468-201.alignment counts-znf_b1h_alignment/ZNF468-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF468-202/ChipExo_models_ZNF468_counts-pos.pattern_0.n_5160-vs-ZNF468-202.alignment counts-znf_b1h_alignment/ZNF468-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF468-202/ChipExo_models_ZNF468_counts-pos.pattern_1.n_463-vs-ZNF468-202.alignment counts-znf_b1h_alignment/ZNF468-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF468-202/ChipExo_models_ZNF468_counts-pos.pattern_2.n_249-vs-ZNF468-202.alignment counts-znf_b1h_alignment/ZNF468-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF468-202/ChipExo_models_ZNF468_counts-pos.pattern_3.n_25-vs-ZNF468-202.alignment counts-znf_b1h_alignment/ZNF468-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF468-202/neg_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_counts_pattern_0.n_37-vs-ZNF468-202.alignment counts-znf_b1h_alignment/ZNF468-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF468-202/neg_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_counts_pattern_1.n_27-vs-ZNF468-202.alignment counts-znf_b1h_alignment/ZNF468-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF468-202/neg_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_counts_pattern_2.n_21-vs-ZNF468-202.alignment counts-znf_b1h_alignment/ZNF468-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF468-202/pos_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_counts_pattern_0.n_1313-vs-ZNF468-202.alignment counts-znf_b1h_alignment/ZNF468-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF468-202/pos_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_counts_pattern_1.n_1304-vs-ZNF468-202.alignment counts-znf_b1h_alignment/ZNF468-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF468-202/pos_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_counts_pattern_2.n_1218-vs-ZNF468-202.alignment counts-znf_b1h_alignment/ZNF468-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF468-202/pos_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_counts_pattern_3.n_183-vs-ZNF468-202.alignment counts-znf_b1h_alignment/ZNF468-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF468-202/pos_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_counts_pattern_4.n_182-vs-ZNF468-202.alignment counts-znf_b1h_alignment/ZNF468-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF468-202/pos_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_counts_pattern_5.n_142-vs-ZNF468-202.alignment counts-znf_b1h_alignment/ZNF468-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF468-202/pos_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_counts_pattern_6.n_131-vs-ZNF468-202.alignment counts-znf_b1h_alignment/ZNF468-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF468-202/pos_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_counts_pattern_7.n_110-vs-ZNF468-202.alignment counts-znf_b1h_alignment/ZNF468-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF468-202/pos_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_counts_pattern_8.n_97-vs-ZNF468-202.alignment counts-znf_b1h_alignment/ZNF468-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF468-202/pos_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_counts_pattern_9.n_61-vs-ZNF468-202.alignment counts-znf_b1h_alignment/ZNF468-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF473-201/pos_patterns.ENCSR567XAM_ChIP_ZNF473_HEK293_ENCSR888YIG_counts_pattern_0.n_296-vs-ZNF473-201.alignment counts-znf_b1h_alignment/ZNF473-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF473-201/pos_patterns.ENCSR567XAM_ChIP_ZNF473_HEK293_ENCSR888YIG_counts_pattern_1.n_20-vs-ZNF473-201.alignment counts-znf_b1h_alignment/ZNF473-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF479-201/ChipExo_models_ZNF479_counts-pos.pattern_0.n_24104-vs-ZNF479-201.alignment counts-znf_b1h_alignment/ZNF479-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF479-201/ChipExo_models_ZNF479_counts-pos.pattern_1.n_1320-vs-ZNF479-201.alignment counts-znf_b1h_alignment/ZNF479-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF479-201/ChipExo_models_ZNF479_counts-pos.pattern_2.n_1190-vs-ZNF479-201.alignment counts-znf_b1h_alignment/ZNF479-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF479-201/ChipExo_models_ZNF479_counts-pos.pattern_3.n_479-vs-ZNF479-201.alignment counts-znf_b1h_alignment/ZNF479-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF479-201/ChipExo_models_ZNF479_counts-pos.pattern_4.n_471-vs-ZNF479-201.alignment counts-znf_b1h_alignment/ZNF479-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF479-201/ChipExo_models_ZNF479_counts-pos.pattern_5.n_93-vs-ZNF479-201.alignment counts-znf_b1h_alignment/ZNF479-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF479-201/ChipExo_models_ZNF479_counts-pos.pattern_6.n_40-vs-ZNF479-201.alignment counts-znf_b1h_alignment/ZNF479-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF479-201/ChipExo_models_ZNF479_counts-pos.pattern_7.n_29-vs-ZNF479-201.alignment counts-znf_b1h_alignment/ZNF479-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF479-201/ChipExo_models_ZNF479_counts-pos.pattern_8.n_22-vs-ZNF479-201.alignment counts-znf_b1h_alignment/ZNF479-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF480-201/ChipExo_models_ZNF480_counts-pos.pattern_0.n_846-vs-ZNF480-201.alignment counts-znf_b1h_alignment/ZNF480-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF480-201/ChipExo_models_ZNF480_counts-pos.pattern_1.n_32-vs-ZNF480-201.alignment counts-znf_b1h_alignment/ZNF480-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF480-201/ChipExo_models_ZNF480_counts-pos.pattern_2.n_21-vs-ZNF480-201.alignment counts-znf_b1h_alignment/ZNF480-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF480-201/ChipExo_models_ZNF480_counts-pos.pattern_3.n_20-vs-ZNF480-201.alignment counts-znf_b1h_alignment/ZNF480-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF48-201/pos_patterns.ENCSR415AEB_ChIP_ZNF48_HepG2_ENCSR166CDD_counts_pattern_0.n_4204-vs-ZNF48-201.alignment counts-znf_b1h_alignment/ZNF48-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF48-201/pos_patterns.ENCSR415AEB_ChIP_ZNF48_HepG2_ENCSR166CDD_counts_pattern_10.n_446-vs-ZNF48-201.alignment counts-znf_b1h_alignment/ZNF48-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF48-201/pos_patterns.ENCSR415AEB_ChIP_ZNF48_HepG2_ENCSR166CDD_counts_pattern_11.n_441-vs-ZNF48-201.alignment counts-znf_b1h_alignment/ZNF48-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF48-201/pos_patterns.ENCSR415AEB_ChIP_ZNF48_HepG2_ENCSR166CDD_counts_pattern_12.n_387-vs-ZNF48-201.alignment counts-znf_b1h_alignment/ZNF48-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF48-201/pos_patterns.ENCSR415AEB_ChIP_ZNF48_HepG2_ENCSR166CDD_counts_pattern_13.n_363-vs-ZNF48-201.alignment counts-znf_b1h_alignment/ZNF48-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF48-201/pos_patterns.ENCSR415AEB_ChIP_ZNF48_HepG2_ENCSR166CDD_counts_pattern_14.n_357-vs-ZNF48-201.alignment counts-znf_b1h_alignment/ZNF48-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF48-201/pos_patterns.ENCSR415AEB_ChIP_ZNF48_HepG2_ENCSR166CDD_counts_pattern_15.n_335-vs-ZNF48-201.alignment counts-znf_b1h_alignment/ZNF48-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF48-201/pos_patterns.ENCSR415AEB_ChIP_ZNF48_HepG2_ENCSR166CDD_counts_pattern_16.n_260-vs-ZNF48-201.alignment counts-znf_b1h_alignment/ZNF48-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF48-201/pos_patterns.ENCSR415AEB_ChIP_ZNF48_HepG2_ENCSR166CDD_counts_pattern_17.n_199-vs-ZNF48-201.alignment counts-znf_b1h_alignment/ZNF48-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF48-201/pos_patterns.ENCSR415AEB_ChIP_ZNF48_HepG2_ENCSR166CDD_counts_pattern_18.n_197-vs-ZNF48-201.alignment counts-znf_b1h_alignment/ZNF48-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF48-201/pos_patterns.ENCSR415AEB_ChIP_ZNF48_HepG2_ENCSR166CDD_counts_pattern_19.n_173-vs-ZNF48-201.alignment counts-znf_b1h_alignment/ZNF48-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF48-201/pos_patterns.ENCSR415AEB_ChIP_ZNF48_HepG2_ENCSR166CDD_counts_pattern_1.n_3637-vs-ZNF48-201.alignment counts-znf_b1h_alignment/ZNF48-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF48-201/pos_patterns.ENCSR415AEB_ChIP_ZNF48_HepG2_ENCSR166CDD_counts_pattern_20.n_163-vs-ZNF48-201.alignment counts-znf_b1h_alignment/ZNF48-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF48-201/pos_patterns.ENCSR415AEB_ChIP_ZNF48_HepG2_ENCSR166CDD_counts_pattern_21.n_102-vs-ZNF48-201.alignment counts-znf_b1h_alignment/ZNF48-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF48-201/pos_patterns.ENCSR415AEB_ChIP_ZNF48_HepG2_ENCSR166CDD_counts_pattern_22.n_76-vs-ZNF48-201.alignment counts-znf_b1h_alignment/ZNF48-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF48-201/pos_patterns.ENCSR415AEB_ChIP_ZNF48_HepG2_ENCSR166CDD_counts_pattern_23.n_45-vs-ZNF48-201.alignment counts-znf_b1h_alignment/ZNF48-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF48-201/pos_patterns.ENCSR415AEB_ChIP_ZNF48_HepG2_ENCSR166CDD_counts_pattern_24.n_43-vs-ZNF48-201.alignment counts-znf_b1h_alignment/ZNF48-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF48-201/pos_patterns.ENCSR415AEB_ChIP_ZNF48_HepG2_ENCSR166CDD_counts_pattern_2.n_3172-vs-ZNF48-201.alignment counts-znf_b1h_alignment/ZNF48-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF48-201/pos_patterns.ENCSR415AEB_ChIP_ZNF48_HepG2_ENCSR166CDD_counts_pattern_3.n_2344-vs-ZNF48-201.alignment counts-znf_b1h_alignment/ZNF48-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF48-201/pos_patterns.ENCSR415AEB_ChIP_ZNF48_HepG2_ENCSR166CDD_counts_pattern_4.n_2078-vs-ZNF48-201.alignment counts-znf_b1h_alignment/ZNF48-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF48-201/pos_patterns.ENCSR415AEB_ChIP_ZNF48_HepG2_ENCSR166CDD_counts_pattern_5.n_789-vs-ZNF48-201.alignment counts-znf_b1h_alignment/ZNF48-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF48-201/pos_patterns.ENCSR415AEB_ChIP_ZNF48_HepG2_ENCSR166CDD_counts_pattern_6.n_785-vs-ZNF48-201.alignment counts-znf_b1h_alignment/ZNF48-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF48-201/pos_patterns.ENCSR415AEB_ChIP_ZNF48_HepG2_ENCSR166CDD_counts_pattern_7.n_626-vs-ZNF48-201.alignment counts-znf_b1h_alignment/ZNF48-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF48-201/pos_patterns.ENCSR415AEB_ChIP_ZNF48_HepG2_ENCSR166CDD_counts_pattern_8.n_493-vs-ZNF48-201.alignment counts-znf_b1h_alignment/ZNF48-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF48-201/pos_patterns.ENCSR415AEB_ChIP_ZNF48_HepG2_ENCSR166CDD_counts_pattern_9.n_492-vs-ZNF48-201.alignment counts-znf_b1h_alignment/ZNF48-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF48-201/pos_patterns.ENCSR517DDU_ChIP_ZNF48_HEK293_ENCSR156BUG_counts_pattern_0.n_198-vs-ZNF48-201.alignment counts-znf_b1h_alignment/ZNF48-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF48-201/pos_patterns.ENCSR517DDU_ChIP_ZNF48_HEK293_ENCSR156BUG_counts_pattern_1.n_40-vs-ZNF48-201.alignment counts-znf_b1h_alignment/ZNF48-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF483-201/ChipExo_models_ZNF483_counts-pos.pattern_0.n_726-vs-ZNF483-201.alignment counts-znf_b1h_alignment/ZNF483-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF483-201/neg_patterns.ENCSR436PIH_ChIP_ZNF483_HepG2_ENCSR179JMM_counts_pattern_0.n_77-vs-ZNF483-201.alignment counts-znf_b1h_alignment/ZNF483-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF483-201/neg_patterns.ENCSR436PIH_ChIP_ZNF483_HepG2_ENCSR179JMM_counts_pattern_10.n_31-vs-ZNF483-201.alignment counts-znf_b1h_alignment/ZNF483-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF483-201/neg_patterns.ENCSR436PIH_ChIP_ZNF483_HepG2_ENCSR179JMM_counts_pattern_11.n_29-vs-ZNF483-201.alignment counts-znf_b1h_alignment/ZNF483-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF483-201/neg_patterns.ENCSR436PIH_ChIP_ZNF483_HepG2_ENCSR179JMM_counts_pattern_12.n_29-vs-ZNF483-201.alignment counts-znf_b1h_alignment/ZNF483-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF483-201/neg_patterns.ENCSR436PIH_ChIP_ZNF483_HepG2_ENCSR179JMM_counts_pattern_13.n_23-vs-ZNF483-201.alignment counts-znf_b1h_alignment/ZNF483-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF483-201/neg_patterns.ENCSR436PIH_ChIP_ZNF483_HepG2_ENCSR179JMM_counts_pattern_14.n_21-vs-ZNF483-201.alignment counts-znf_b1h_alignment/ZNF483-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF483-201/neg_patterns.ENCSR436PIH_ChIP_ZNF483_HepG2_ENCSR179JMM_counts_pattern_1.n_67-vs-ZNF483-201.alignment counts-znf_b1h_alignment/ZNF483-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF483-201/neg_patterns.ENCSR436PIH_ChIP_ZNF483_HepG2_ENCSR179JMM_counts_pattern_2.n_55-vs-ZNF483-201.alignment counts-znf_b1h_alignment/ZNF483-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF483-201/neg_patterns.ENCSR436PIH_ChIP_ZNF483_HepG2_ENCSR179JMM_counts_pattern_3.n_54-vs-ZNF483-201.alignment counts-znf_b1h_alignment/ZNF483-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF483-201/neg_patterns.ENCSR436PIH_ChIP_ZNF483_HepG2_ENCSR179JMM_counts_pattern_4.n_51-vs-ZNF483-201.alignment counts-znf_b1h_alignment/ZNF483-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF483-201/neg_patterns.ENCSR436PIH_ChIP_ZNF483_HepG2_ENCSR179JMM_counts_pattern_5.n_47-vs-ZNF483-201.alignment counts-znf_b1h_alignment/ZNF483-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF483-201/neg_patterns.ENCSR436PIH_ChIP_ZNF483_HepG2_ENCSR179JMM_counts_pattern_6.n_39-vs-ZNF483-201.alignment counts-znf_b1h_alignment/ZNF483-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF483-201/neg_patterns.ENCSR436PIH_ChIP_ZNF483_HepG2_ENCSR179JMM_counts_pattern_7.n_37-vs-ZNF483-201.alignment counts-znf_b1h_alignment/ZNF483-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF483-201/neg_patterns.ENCSR436PIH_ChIP_ZNF483_HepG2_ENCSR179JMM_counts_pattern_8.n_35-vs-ZNF483-201.alignment counts-znf_b1h_alignment/ZNF483-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF483-201/neg_patterns.ENCSR436PIH_ChIP_ZNF483_HepG2_ENCSR179JMM_counts_pattern_9.n_34-vs-ZNF483-201.alignment counts-znf_b1h_alignment/ZNF483-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF483-201/pos_patterns.ENCSR436PIH_ChIP_ZNF483_HepG2_ENCSR179JMM_counts_pattern_0.n_2547-vs-ZNF483-201.alignment counts-znf_b1h_alignment/ZNF483-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF483-201/pos_patterns.ENCSR436PIH_ChIP_ZNF483_HepG2_ENCSR179JMM_counts_pattern_10.n_427-vs-ZNF483-201.alignment counts-znf_b1h_alignment/ZNF483-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF483-201/pos_patterns.ENCSR436PIH_ChIP_ZNF483_HepG2_ENCSR179JMM_counts_pattern_11.n_426-vs-ZNF483-201.alignment counts-znf_b1h_alignment/ZNF483-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF483-201/pos_patterns.ENCSR436PIH_ChIP_ZNF483_HepG2_ENCSR179JMM_counts_pattern_12.n_418-vs-ZNF483-201.alignment counts-znf_b1h_alignment/ZNF483-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF483-201/pos_patterns.ENCSR436PIH_ChIP_ZNF483_HepG2_ENCSR179JMM_counts_pattern_13.n_329-vs-ZNF483-201.alignment counts-znf_b1h_alignment/ZNF483-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF483-201/pos_patterns.ENCSR436PIH_ChIP_ZNF483_HepG2_ENCSR179JMM_counts_pattern_14.n_283-vs-ZNF483-201.alignment counts-znf_b1h_alignment/ZNF483-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF483-201/pos_patterns.ENCSR436PIH_ChIP_ZNF483_HepG2_ENCSR179JMM_counts_pattern_15.n_282-vs-ZNF483-201.alignment counts-znf_b1h_alignment/ZNF483-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF483-201/pos_patterns.ENCSR436PIH_ChIP_ZNF483_HepG2_ENCSR179JMM_counts_pattern_16.n_268-vs-ZNF483-201.alignment counts-znf_b1h_alignment/ZNF483-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF483-201/pos_patterns.ENCSR436PIH_ChIP_ZNF483_HepG2_ENCSR179JMM_counts_pattern_17.n_227-vs-ZNF483-201.alignment counts-znf_b1h_alignment/ZNF483-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF483-201/pos_patterns.ENCSR436PIH_ChIP_ZNF483_HepG2_ENCSR179JMM_counts_pattern_18.n_199-vs-ZNF483-201.alignment counts-znf_b1h_alignment/ZNF483-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF483-201/pos_patterns.ENCSR436PIH_ChIP_ZNF483_HepG2_ENCSR179JMM_counts_pattern_19.n_128-vs-ZNF483-201.alignment counts-znf_b1h_alignment/ZNF483-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF483-201/pos_patterns.ENCSR436PIH_ChIP_ZNF483_HepG2_ENCSR179JMM_counts_pattern_1.n_2191-vs-ZNF483-201.alignment counts-znf_b1h_alignment/ZNF483-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF483-201/pos_patterns.ENCSR436PIH_ChIP_ZNF483_HepG2_ENCSR179JMM_counts_pattern_20.n_116-vs-ZNF483-201.alignment counts-znf_b1h_alignment/ZNF483-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF483-201/pos_patterns.ENCSR436PIH_ChIP_ZNF483_HepG2_ENCSR179JMM_counts_pattern_21.n_45-vs-ZNF483-201.alignment counts-znf_b1h_alignment/ZNF483-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF483-201/pos_patterns.ENCSR436PIH_ChIP_ZNF483_HepG2_ENCSR179JMM_counts_pattern_22.n_42-vs-ZNF483-201.alignment counts-znf_b1h_alignment/ZNF483-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF483-201/pos_patterns.ENCSR436PIH_ChIP_ZNF483_HepG2_ENCSR179JMM_counts_pattern_2.n_1525-vs-ZNF483-201.alignment counts-znf_b1h_alignment/ZNF483-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF483-201/pos_patterns.ENCSR436PIH_ChIP_ZNF483_HepG2_ENCSR179JMM_counts_pattern_3.n_1342-vs-ZNF483-201.alignment counts-znf_b1h_alignment/ZNF483-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF483-201/pos_patterns.ENCSR436PIH_ChIP_ZNF483_HepG2_ENCSR179JMM_counts_pattern_4.n_1192-vs-ZNF483-201.alignment counts-znf_b1h_alignment/ZNF483-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF483-201/pos_patterns.ENCSR436PIH_ChIP_ZNF483_HepG2_ENCSR179JMM_counts_pattern_5.n_778-vs-ZNF483-201.alignment counts-znf_b1h_alignment/ZNF483-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF483-201/pos_patterns.ENCSR436PIH_ChIP_ZNF483_HepG2_ENCSR179JMM_counts_pattern_6.n_685-vs-ZNF483-201.alignment counts-znf_b1h_alignment/ZNF483-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF483-201/pos_patterns.ENCSR436PIH_ChIP_ZNF483_HepG2_ENCSR179JMM_counts_pattern_7.n_610-vs-ZNF483-201.alignment counts-znf_b1h_alignment/ZNF483-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF483-201/pos_patterns.ENCSR436PIH_ChIP_ZNF483_HepG2_ENCSR179JMM_counts_pattern_8.n_598-vs-ZNF483-201.alignment counts-znf_b1h_alignment/ZNF483-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF483-201/pos_patterns.ENCSR436PIH_ChIP_ZNF483_HepG2_ENCSR179JMM_counts_pattern_9.n_529-vs-ZNF483-201.alignment counts-znf_b1h_alignment/ZNF483-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF484-202/ChipExo_models_ZNF484_counts-pos.pattern_0.n_491-vs-ZNF484-202.alignment counts-znf_b1h_alignment/ZNF484-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF484-202/ChipExo_models_ZNF484_counts-pos.pattern_1.n_87-vs-ZNF484-202.alignment counts-znf_b1h_alignment/ZNF484-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF484-202/pos_patterns.ENCSR471VAY_ChIP_ZNF484_HepG2_ENCSR669ZKJ_counts_pattern_0.n_801-vs-ZNF484-202.alignment counts-znf_b1h_alignment/ZNF484-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF484-202/pos_patterns.ENCSR471VAY_ChIP_ZNF484_HepG2_ENCSR669ZKJ_counts_pattern_1.n_674-vs-ZNF484-202.alignment counts-znf_b1h_alignment/ZNF484-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF484-202/pos_patterns.ENCSR471VAY_ChIP_ZNF484_HepG2_ENCSR669ZKJ_counts_pattern_2.n_486-vs-ZNF484-202.alignment counts-znf_b1h_alignment/ZNF484-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF484-202/pos_patterns.ENCSR471VAY_ChIP_ZNF484_HepG2_ENCSR669ZKJ_counts_pattern_3.n_140-vs-ZNF484-202.alignment counts-znf_b1h_alignment/ZNF484-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF484-202/pos_patterns.ENCSR471VAY_ChIP_ZNF484_HepG2_ENCSR669ZKJ_counts_pattern_4.n_122-vs-ZNF484-202.alignment counts-znf_b1h_alignment/ZNF484-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF485-201/ChipExo_models_ZNF485_counts-pos.pattern_0.n_9235-vs-ZNF485-201.alignment counts-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF485-201/neg_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_counts_pattern_0.n_188-vs-ZNF485-201.alignment counts-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF485-201/neg_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_counts_pattern_1.n_176-vs-ZNF485-201.alignment counts-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF485-201/neg_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_counts_pattern_2.n_56-vs-ZNF485-201.alignment counts-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF485-201/neg_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_counts_pattern_3.n_54-vs-ZNF485-201.alignment counts-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF485-201/neg_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_counts_pattern_4.n_47-vs-ZNF485-201.alignment counts-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF485-201/neg_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_counts_pattern_5.n_35-vs-ZNF485-201.alignment counts-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF485-201/neg_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_counts_pattern_6.n_30-vs-ZNF485-201.alignment counts-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF485-201/neg_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_counts_pattern_7.n_27-vs-ZNF485-201.alignment counts-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF485-201/neg_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_counts_pattern_8.n_26-vs-ZNF485-201.alignment counts-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF485-201/neg_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_counts_pattern_9.n_23-vs-ZNF485-201.alignment counts-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF485-201/pos_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_counts_pattern_0.n_1171-vs-ZNF485-201.alignment counts-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF485-201/pos_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_counts_pattern_10.n_211-vs-ZNF485-201.alignment counts-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF485-201/pos_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_counts_pattern_11.n_184-vs-ZNF485-201.alignment counts-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF485-201/pos_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_counts_pattern_12.n_135-vs-ZNF485-201.alignment counts-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF485-201/pos_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_counts_pattern_13.n_132-vs-ZNF485-201.alignment counts-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF485-201/pos_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_counts_pattern_14.n_127-vs-ZNF485-201.alignment counts-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF485-201/pos_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_counts_pattern_15.n_108-vs-ZNF485-201.alignment counts-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF485-201/pos_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_counts_pattern_16.n_90-vs-ZNF485-201.alignment counts-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF485-201/pos_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_counts_pattern_17.n_65-vs-ZNF485-201.alignment counts-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF485-201/pos_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_counts_pattern_18.n_64-vs-ZNF485-201.alignment counts-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF485-201/pos_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_counts_pattern_19.n_48-vs-ZNF485-201.alignment counts-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF485-201/pos_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_counts_pattern_1.n_1097-vs-ZNF485-201.alignment counts-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF485-201/pos_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_counts_pattern_20.n_39-vs-ZNF485-201.alignment counts-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF485-201/pos_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_counts_pattern_21.n_27-vs-ZNF485-201.alignment counts-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF485-201/pos_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_counts_pattern_2.n_648-vs-ZNF485-201.alignment counts-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF485-201/pos_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_counts_pattern_3.n_376-vs-ZNF485-201.alignment counts-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF485-201/pos_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_counts_pattern_4.n_344-vs-ZNF485-201.alignment counts-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF485-201/pos_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_counts_pattern_5.n_322-vs-ZNF485-201.alignment counts-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF485-201/pos_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_counts_pattern_6.n_290-vs-ZNF485-201.alignment counts-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF485-201/pos_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_counts_pattern_7.n_283-vs-ZNF485-201.alignment counts-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF485-201/pos_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_counts_pattern_8.n_264-vs-ZNF485-201.alignment counts-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF485-201/pos_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_counts_pattern_9.n_254-vs-ZNF485-201.alignment counts-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF486-201/ChipExo_models_ZNF486_counts-pos.pattern_0.n_186-vs-ZNF486-201.alignment counts-znf_b1h_alignment/ZNF486-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF486-201/ChipExo_models_ZNF486_counts-pos.pattern_1.n_26-vs-ZNF486-201.alignment counts-znf_b1h_alignment/ZNF486-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF488-201/neg_patterns.ENCSR363XBR_ChIP_ZNF488_HEK293_ENCSR253RDI_counts_pattern_0.n_30-vs-ZNF488-201.alignment counts-znf_b1h_alignment/ZNF488-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF488-201/neg_patterns.ENCSR363XBR_ChIP_ZNF488_HEK293_ENCSR253RDI_counts_pattern_1.n_24-vs-ZNF488-201.alignment counts-znf_b1h_alignment/ZNF488-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF488-201/neg_patterns.ENCSR363XBR_ChIP_ZNF488_HEK293_ENCSR253RDI_counts_pattern_2.n_23-vs-ZNF488-201.alignment counts-znf_b1h_alignment/ZNF488-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF488-201/pos_patterns.ENCSR363XBR_ChIP_ZNF488_HEK293_ENCSR253RDI_counts_pattern_0.n_543-vs-ZNF488-201.alignment counts-znf_b1h_alignment/ZNF488-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF488-201/pos_patterns.ENCSR363XBR_ChIP_ZNF488_HEK293_ENCSR253RDI_counts_pattern_10.n_64-vs-ZNF488-201.alignment counts-znf_b1h_alignment/ZNF488-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF488-201/pos_patterns.ENCSR363XBR_ChIP_ZNF488_HEK293_ENCSR253RDI_counts_pattern_11.n_53-vs-ZNF488-201.alignment counts-znf_b1h_alignment/ZNF488-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF488-201/pos_patterns.ENCSR363XBR_ChIP_ZNF488_HEK293_ENCSR253RDI_counts_pattern_12.n_50-vs-ZNF488-201.alignment counts-znf_b1h_alignment/ZNF488-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF488-201/pos_patterns.ENCSR363XBR_ChIP_ZNF488_HEK293_ENCSR253RDI_counts_pattern_13.n_38-vs-ZNF488-201.alignment counts-znf_b1h_alignment/ZNF488-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF488-201/pos_patterns.ENCSR363XBR_ChIP_ZNF488_HEK293_ENCSR253RDI_counts_pattern_14.n_28-vs-ZNF488-201.alignment counts-znf_b1h_alignment/ZNF488-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF488-201/pos_patterns.ENCSR363XBR_ChIP_ZNF488_HEK293_ENCSR253RDI_counts_pattern_1.n_364-vs-ZNF488-201.alignment counts-znf_b1h_alignment/ZNF488-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF488-201/pos_patterns.ENCSR363XBR_ChIP_ZNF488_HEK293_ENCSR253RDI_counts_pattern_2.n_296-vs-ZNF488-201.alignment counts-znf_b1h_alignment/ZNF488-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF488-201/pos_patterns.ENCSR363XBR_ChIP_ZNF488_HEK293_ENCSR253RDI_counts_pattern_3.n_263-vs-ZNF488-201.alignment counts-znf_b1h_alignment/ZNF488-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF488-201/pos_patterns.ENCSR363XBR_ChIP_ZNF488_HEK293_ENCSR253RDI_counts_pattern_4.n_147-vs-ZNF488-201.alignment counts-znf_b1h_alignment/ZNF488-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF488-201/pos_patterns.ENCSR363XBR_ChIP_ZNF488_HEK293_ENCSR253RDI_counts_pattern_5.n_146-vs-ZNF488-201.alignment counts-znf_b1h_alignment/ZNF488-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF488-201/pos_patterns.ENCSR363XBR_ChIP_ZNF488_HEK293_ENCSR253RDI_counts_pattern_6.n_118-vs-ZNF488-201.alignment counts-znf_b1h_alignment/ZNF488-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF488-201/pos_patterns.ENCSR363XBR_ChIP_ZNF488_HEK293_ENCSR253RDI_counts_pattern_7.n_110-vs-ZNF488-201.alignment counts-znf_b1h_alignment/ZNF488-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF488-201/pos_patterns.ENCSR363XBR_ChIP_ZNF488_HEK293_ENCSR253RDI_counts_pattern_8.n_103-vs-ZNF488-201.alignment counts-znf_b1h_alignment/ZNF488-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF488-201/pos_patterns.ENCSR363XBR_ChIP_ZNF488_HEK293_ENCSR253RDI_counts_pattern_9.n_67-vs-ZNF488-201.alignment counts-znf_b1h_alignment/ZNF488-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF490-201/Hughes_GR_models_ZNF490_counts-pos.pattern_0.n_11507-vs-ZNF490-201.alignment counts-znf_b1h_alignment/ZNF490-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF490-201/Hughes_GR_models_ZNF490_counts-pos.pattern_1.n_502-vs-ZNF490-201.alignment counts-znf_b1h_alignment/ZNF490-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF490-201/Hughes_GR_models_ZNF490_counts-pos.pattern_2.n_27-vs-ZNF490-201.alignment counts-znf_b1h_alignment/ZNF490-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF490-201/neg_patterns.ENCSR542PZA_ChIP_ZNF490_HepG2_ENCSR594HLF_counts_pattern_0.n_36-vs-ZNF490-201.alignment counts-znf_b1h_alignment/ZNF490-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF490-201/pos_patterns.ENCSR542PZA_ChIP_ZNF490_HepG2_ENCSR594HLF_counts_pattern_0.n_1245-vs-ZNF490-201.alignment counts-znf_b1h_alignment/ZNF490-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF490-201/pos_patterns.ENCSR542PZA_ChIP_ZNF490_HepG2_ENCSR594HLF_counts_pattern_1.n_565-vs-ZNF490-201.alignment counts-znf_b1h_alignment/ZNF490-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF490-201/pos_patterns.ENCSR542PZA_ChIP_ZNF490_HepG2_ENCSR594HLF_counts_pattern_2.n_260-vs-ZNF490-201.alignment counts-znf_b1h_alignment/ZNF490-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF490-201/pos_patterns.ENCSR542PZA_ChIP_ZNF490_HepG2_ENCSR594HLF_counts_pattern_3.n_106-vs-ZNF490-201.alignment counts-znf_b1h_alignment/ZNF490-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF490-201/pos_patterns.ENCSR542PZA_ChIP_ZNF490_HepG2_ENCSR594HLF_counts_pattern_4.n_75-vs-ZNF490-201.alignment counts-znf_b1h_alignment/ZNF490-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF490-201/pos_patterns.ENCSR542PZA_ChIP_ZNF490_HepG2_ENCSR594HLF_counts_pattern_5.n_68-vs-ZNF490-201.alignment counts-znf_b1h_alignment/ZNF490-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF490-201/pos_patterns.ENCSR542PZA_ChIP_ZNF490_HepG2_ENCSR594HLF_counts_pattern_6.n_34-vs-ZNF490-201.alignment counts-znf_b1h_alignment/ZNF490-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF490-201/pos_patterns.ENCSR542PZA_ChIP_ZNF490_HepG2_ENCSR594HLF_counts_pattern_7.n_25-vs-ZNF490-201.alignment counts-znf_b1h_alignment/ZNF490-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF492-201/ChipExo_models_ZNF492_counts-pos.pattern_0.n_381-vs-ZNF492-201.alignment counts-znf_b1h_alignment/ZNF492-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF492-201/ChipExo_models_ZNF492_counts-pos.pattern_1.n_27-vs-ZNF492-201.alignment counts-znf_b1h_alignment/ZNF492-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF492-201/ChipExo_models_ZNF492_counts-pos.pattern_2.n_27-vs-ZNF492-201.alignment counts-znf_b1h_alignment/ZNF492-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF496-201/ChipExo_models_ZNF496_counts-pos.pattern_0.n_128-vs-ZNF496-201.alignment counts-znf_b1h_alignment/ZNF496-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF496-201/pos_patterns.ENCSR828TVO_ChIP_ZNF496_HepG2_ENCSR336VTS_counts_pattern_0.n_48-vs-ZNF496-201.alignment counts-znf_b1h_alignment/ZNF496-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF496-201/pos_patterns.ENCSR828TVO_ChIP_ZNF496_HepG2_ENCSR336VTS_counts_pattern_1.n_27-vs-ZNF496-201.alignment counts-znf_b1h_alignment/ZNF496-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF496-201/pos_patterns.ENCSR828TVO_ChIP_ZNF496_HepG2_ENCSR336VTS_counts_pattern_2.n_25-vs-ZNF496-201.alignment counts-znf_b1h_alignment/ZNF496-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF496-201/pos_patterns.ENCSR828TVO_ChIP_ZNF496_HepG2_ENCSR336VTS_counts_pattern_3.n_24-vs-ZNF496-201.alignment counts-znf_b1h_alignment/ZNF496-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/neg_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_0.n_82-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/neg_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_10.n_28-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/neg_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_11.n_27-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/neg_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_12.n_27-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/neg_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_13.n_24-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/neg_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_14.n_22-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/neg_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_15.n_20-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/neg_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_1.n_64-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/neg_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_2.n_60-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/neg_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_3.n_46-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/neg_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_4.n_43-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/neg_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_5.n_41-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/neg_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_6.n_39-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/neg_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_7.n_37-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/neg_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_8.n_35-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/neg_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_9.n_33-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/neg_patterns.ENCSR461ZJT_ChIP_ZNF501_HEK293_ENCSR479YFJ_counts_pattern_0.n_41-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/neg_patterns.ENCSR461ZJT_ChIP_ZNF501_HEK293_ENCSR479YFJ_counts_pattern_1.n_26-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/neg_patterns.ENCSR461ZJT_ChIP_ZNF501_HEK293_ENCSR479YFJ_counts_pattern_2.n_21-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_0.n_4132-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_10.n_499-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_11.n_479-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_12.n_467-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_13.n_442-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_14.n_422-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_15.n_363-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_16.n_323-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_17.n_264-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_18.n_262-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_19.n_211-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_1.n_3803-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_20.n_207-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_21.n_203-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_22.n_201-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_23.n_158-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_24.n_158-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_25.n_153-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_26.n_151-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_27.n_143-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_28.n_138-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_29.n_132-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_2.n_1697-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_30.n_130-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_31.n_77-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_32.n_56-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_33.n_24-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_3.n_1624-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_4.n_1278-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_5.n_858-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_6.n_831-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_7.n_754-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_8.n_666-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_counts_pattern_9.n_646-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR461ZJT_ChIP_ZNF501_HEK293_ENCSR479YFJ_counts_pattern_0.n_1854-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR461ZJT_ChIP_ZNF501_HEK293_ENCSR479YFJ_counts_pattern_10.n_406-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR461ZJT_ChIP_ZNF501_HEK293_ENCSR479YFJ_counts_pattern_11.n_337-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR461ZJT_ChIP_ZNF501_HEK293_ENCSR479YFJ_counts_pattern_12.n_316-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR461ZJT_ChIP_ZNF501_HEK293_ENCSR479YFJ_counts_pattern_13.n_284-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR461ZJT_ChIP_ZNF501_HEK293_ENCSR479YFJ_counts_pattern_14.n_279-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR461ZJT_ChIP_ZNF501_HEK293_ENCSR479YFJ_counts_pattern_15.n_259-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR461ZJT_ChIP_ZNF501_HEK293_ENCSR479YFJ_counts_pattern_16.n_239-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR461ZJT_ChIP_ZNF501_HEK293_ENCSR479YFJ_counts_pattern_17.n_222-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR461ZJT_ChIP_ZNF501_HEK293_ENCSR479YFJ_counts_pattern_18.n_210-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR461ZJT_ChIP_ZNF501_HEK293_ENCSR479YFJ_counts_pattern_19.n_165-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR461ZJT_ChIP_ZNF501_HEK293_ENCSR479YFJ_counts_pattern_1.n_1262-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR461ZJT_ChIP_ZNF501_HEK293_ENCSR479YFJ_counts_pattern_20.n_150-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR461ZJT_ChIP_ZNF501_HEK293_ENCSR479YFJ_counts_pattern_21.n_146-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR461ZJT_ChIP_ZNF501_HEK293_ENCSR479YFJ_counts_pattern_22.n_131-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR461ZJT_ChIP_ZNF501_HEK293_ENCSR479YFJ_counts_pattern_23.n_125-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR461ZJT_ChIP_ZNF501_HEK293_ENCSR479YFJ_counts_pattern_24.n_106-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR461ZJT_ChIP_ZNF501_HEK293_ENCSR479YFJ_counts_pattern_25.n_92-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR461ZJT_ChIP_ZNF501_HEK293_ENCSR479YFJ_counts_pattern_26.n_91-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR461ZJT_ChIP_ZNF501_HEK293_ENCSR479YFJ_counts_pattern_27.n_90-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR461ZJT_ChIP_ZNF501_HEK293_ENCSR479YFJ_counts_pattern_28.n_87-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR461ZJT_ChIP_ZNF501_HEK293_ENCSR479YFJ_counts_pattern_29.n_70-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR461ZJT_ChIP_ZNF501_HEK293_ENCSR479YFJ_counts_pattern_2.n_1192-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR461ZJT_ChIP_ZNF501_HEK293_ENCSR479YFJ_counts_pattern_30.n_39-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR461ZJT_ChIP_ZNF501_HEK293_ENCSR479YFJ_counts_pattern_31.n_35-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR461ZJT_ChIP_ZNF501_HEK293_ENCSR479YFJ_counts_pattern_32.n_22-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR461ZJT_ChIP_ZNF501_HEK293_ENCSR479YFJ_counts_pattern_3.n_893-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR461ZJT_ChIP_ZNF501_HEK293_ENCSR479YFJ_counts_pattern_4.n_718-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR461ZJT_ChIP_ZNF501_HEK293_ENCSR479YFJ_counts_pattern_5.n_611-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR461ZJT_ChIP_ZNF501_HEK293_ENCSR479YFJ_counts_pattern_6.n_554-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR461ZJT_ChIP_ZNF501_HEK293_ENCSR479YFJ_counts_pattern_7.n_550-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR461ZJT_ChIP_ZNF501_HEK293_ENCSR479YFJ_counts_pattern_8.n_545-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR461ZJT_ChIP_ZNF501_HEK293_ENCSR479YFJ_counts_pattern_9.n_458-vs-ZNF501-201.alignment counts-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF502-201/Hughes_GR_models_ZNF502_counts-pos.pattern_0.n_301-vs-ZNF502-201.alignment counts-znf_b1h_alignment/ZNF502-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF502-201/Hughes_GR_models_ZNF502_counts-pos.pattern_1.n_58-vs-ZNF502-201.alignment counts-znf_b1h_alignment/ZNF502-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF502-201/Hughes_GR_models_ZNF502_counts-pos.pattern_2.n_49-vs-ZNF502-201.alignment counts-znf_b1h_alignment/ZNF502-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF506-201/ChipExo_models_ZNF506_counts-pos.pattern_0.n_7059-vs-ZNF506-201.alignment counts-znf_b1h_alignment/ZNF506-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF506-201/ChipExo_models_ZNF506_counts-pos.pattern_1.n_1341-vs-ZNF506-201.alignment counts-znf_b1h_alignment/ZNF506-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF506-201/ChipExo_models_ZNF506_counts-pos.pattern_2.n_224-vs-ZNF506-201.alignment counts-znf_b1h_alignment/ZNF506-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF506-201/ChipExo_models_ZNF506_counts-pos.pattern_3.n_24-vs-ZNF506-201.alignment counts-znf_b1h_alignment/ZNF506-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-201/neg_patterns.ENCSR598TIR_ChIP_ZNF507_K562_ENCSR584USG_counts_pattern_0.n_39-vs-ZNF507-201.alignment counts-znf_b1h_alignment/ZNF507-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-201/neg_patterns.ENCSR598TIR_ChIP_ZNF507_K562_ENCSR584USG_counts_pattern_1.n_37-vs-ZNF507-201.alignment counts-znf_b1h_alignment/ZNF507-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-201/pos_patterns.ENCSR419ODQ_ChIP_ZNF507_MCF-7_ENCSR594KRP_counts_pattern_0.n_2459-vs-ZNF507-201.alignment counts-znf_b1h_alignment/ZNF507-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-201/pos_patterns.ENCSR419ODQ_ChIP_ZNF507_MCF-7_ENCSR594KRP_counts_pattern_1.n_136-vs-ZNF507-201.alignment counts-znf_b1h_alignment/ZNF507-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-201/pos_patterns.ENCSR419ODQ_ChIP_ZNF507_MCF-7_ENCSR594KRP_counts_pattern_2.n_71-vs-ZNF507-201.alignment counts-znf_b1h_alignment/ZNF507-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-201/pos_patterns.ENCSR419ODQ_ChIP_ZNF507_MCF-7_ENCSR594KRP_counts_pattern_3.n_63-vs-ZNF507-201.alignment counts-znf_b1h_alignment/ZNF507-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-201/pos_patterns.ENCSR419ODQ_ChIP_ZNF507_MCF-7_ENCSR594KRP_counts_pattern_4.n_24-vs-ZNF507-201.alignment counts-znf_b1h_alignment/ZNF507-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-201/pos_patterns.ENCSR577KQD_ChIP_ZNF507_K562_ENCSR347XXG_counts_pattern_0.n_3260-vs-ZNF507-201.alignment counts-znf_b1h_alignment/ZNF507-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-201/pos_patterns.ENCSR577KQD_ChIP_ZNF507_K562_ENCSR347XXG_counts_pattern_1.n_1388-vs-ZNF507-201.alignment counts-znf_b1h_alignment/ZNF507-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-201/pos_patterns.ENCSR577KQD_ChIP_ZNF507_K562_ENCSR347XXG_counts_pattern_2.n_703-vs-ZNF507-201.alignment counts-znf_b1h_alignment/ZNF507-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-201/pos_patterns.ENCSR577KQD_ChIP_ZNF507_K562_ENCSR347XXG_counts_pattern_3.n_340-vs-ZNF507-201.alignment counts-znf_b1h_alignment/ZNF507-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-201/pos_patterns.ENCSR577KQD_ChIP_ZNF507_K562_ENCSR347XXG_counts_pattern_4.n_275-vs-ZNF507-201.alignment counts-znf_b1h_alignment/ZNF507-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-201/pos_patterns.ENCSR577KQD_ChIP_ZNF507_K562_ENCSR347XXG_counts_pattern_5.n_218-vs-ZNF507-201.alignment counts-znf_b1h_alignment/ZNF507-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-201/pos_patterns.ENCSR577KQD_ChIP_ZNF507_K562_ENCSR347XXG_counts_pattern_6.n_71-vs-ZNF507-201.alignment counts-znf_b1h_alignment/ZNF507-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-201/pos_patterns.ENCSR577KQD_ChIP_ZNF507_K562_ENCSR347XXG_counts_pattern_7.n_54-vs-ZNF507-201.alignment counts-znf_b1h_alignment/ZNF507-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-201/pos_patterns.ENCSR577KQD_ChIP_ZNF507_K562_ENCSR347XXG_counts_pattern_8.n_38-vs-ZNF507-201.alignment counts-znf_b1h_alignment/ZNF507-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-201/pos_patterns.ENCSR598TIR_ChIP_ZNF507_K562_ENCSR584USG_counts_pattern_0.n_4081-vs-ZNF507-201.alignment counts-znf_b1h_alignment/ZNF507-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-201/pos_patterns.ENCSR598TIR_ChIP_ZNF507_K562_ENCSR584USG_counts_pattern_1.n_4043-vs-ZNF507-201.alignment counts-znf_b1h_alignment/ZNF507-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-201/pos_patterns.ENCSR598TIR_ChIP_ZNF507_K562_ENCSR584USG_counts_pattern_2.n_2810-vs-ZNF507-201.alignment counts-znf_b1h_alignment/ZNF507-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-201/pos_patterns.ENCSR598TIR_ChIP_ZNF507_K562_ENCSR584USG_counts_pattern_3.n_436-vs-ZNF507-201.alignment counts-znf_b1h_alignment/ZNF507-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-201/pos_patterns.ENCSR598TIR_ChIP_ZNF507_K562_ENCSR584USG_counts_pattern_4.n_404-vs-ZNF507-201.alignment counts-znf_b1h_alignment/ZNF507-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-201/pos_patterns.ENCSR598TIR_ChIP_ZNF507_K562_ENCSR584USG_counts_pattern_5.n_322-vs-ZNF507-201.alignment counts-znf_b1h_alignment/ZNF507-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-201/pos_patterns.ENCSR598TIR_ChIP_ZNF507_K562_ENCSR584USG_counts_pattern_6.n_139-vs-ZNF507-201.alignment counts-znf_b1h_alignment/ZNF507-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-201/pos_patterns.ENCSR598TIR_ChIP_ZNF507_K562_ENCSR584USG_counts_pattern_7.n_50-vs-ZNF507-201.alignment counts-znf_b1h_alignment/ZNF507-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-205/neg_patterns.ENCSR598TIR_ChIP_ZNF507_K562_ENCSR584USG_counts_pattern_0.n_39-vs-ZNF507-205.alignment counts-znf_b1h_alignment/ZNF507-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-205/neg_patterns.ENCSR598TIR_ChIP_ZNF507_K562_ENCSR584USG_counts_pattern_1.n_37-vs-ZNF507-205.alignment counts-znf_b1h_alignment/ZNF507-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-205/pos_patterns.ENCSR419ODQ_ChIP_ZNF507_MCF-7_ENCSR594KRP_counts_pattern_0.n_2459-vs-ZNF507-205.alignment counts-znf_b1h_alignment/ZNF507-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-205/pos_patterns.ENCSR419ODQ_ChIP_ZNF507_MCF-7_ENCSR594KRP_counts_pattern_1.n_136-vs-ZNF507-205.alignment counts-znf_b1h_alignment/ZNF507-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-205/pos_patterns.ENCSR419ODQ_ChIP_ZNF507_MCF-7_ENCSR594KRP_counts_pattern_2.n_71-vs-ZNF507-205.alignment counts-znf_b1h_alignment/ZNF507-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-205/pos_patterns.ENCSR419ODQ_ChIP_ZNF507_MCF-7_ENCSR594KRP_counts_pattern_3.n_63-vs-ZNF507-205.alignment counts-znf_b1h_alignment/ZNF507-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-205/pos_patterns.ENCSR419ODQ_ChIP_ZNF507_MCF-7_ENCSR594KRP_counts_pattern_4.n_24-vs-ZNF507-205.alignment counts-znf_b1h_alignment/ZNF507-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-205/pos_patterns.ENCSR577KQD_ChIP_ZNF507_K562_ENCSR347XXG_counts_pattern_0.n_3260-vs-ZNF507-205.alignment counts-znf_b1h_alignment/ZNF507-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-205/pos_patterns.ENCSR577KQD_ChIP_ZNF507_K562_ENCSR347XXG_counts_pattern_1.n_1388-vs-ZNF507-205.alignment counts-znf_b1h_alignment/ZNF507-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-205/pos_patterns.ENCSR577KQD_ChIP_ZNF507_K562_ENCSR347XXG_counts_pattern_2.n_703-vs-ZNF507-205.alignment counts-znf_b1h_alignment/ZNF507-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-205/pos_patterns.ENCSR577KQD_ChIP_ZNF507_K562_ENCSR347XXG_counts_pattern_3.n_340-vs-ZNF507-205.alignment counts-znf_b1h_alignment/ZNF507-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-205/pos_patterns.ENCSR577KQD_ChIP_ZNF507_K562_ENCSR347XXG_counts_pattern_4.n_275-vs-ZNF507-205.alignment counts-znf_b1h_alignment/ZNF507-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-205/pos_patterns.ENCSR577KQD_ChIP_ZNF507_K562_ENCSR347XXG_counts_pattern_5.n_218-vs-ZNF507-205.alignment counts-znf_b1h_alignment/ZNF507-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-205/pos_patterns.ENCSR577KQD_ChIP_ZNF507_K562_ENCSR347XXG_counts_pattern_6.n_71-vs-ZNF507-205.alignment counts-znf_b1h_alignment/ZNF507-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-205/pos_patterns.ENCSR577KQD_ChIP_ZNF507_K562_ENCSR347XXG_counts_pattern_7.n_54-vs-ZNF507-205.alignment counts-znf_b1h_alignment/ZNF507-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-205/pos_patterns.ENCSR577KQD_ChIP_ZNF507_K562_ENCSR347XXG_counts_pattern_8.n_38-vs-ZNF507-205.alignment counts-znf_b1h_alignment/ZNF507-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-205/pos_patterns.ENCSR598TIR_ChIP_ZNF507_K562_ENCSR584USG_counts_pattern_0.n_4081-vs-ZNF507-205.alignment counts-znf_b1h_alignment/ZNF507-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-205/pos_patterns.ENCSR598TIR_ChIP_ZNF507_K562_ENCSR584USG_counts_pattern_1.n_4043-vs-ZNF507-205.alignment counts-znf_b1h_alignment/ZNF507-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-205/pos_patterns.ENCSR598TIR_ChIP_ZNF507_K562_ENCSR584USG_counts_pattern_2.n_2810-vs-ZNF507-205.alignment counts-znf_b1h_alignment/ZNF507-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-205/pos_patterns.ENCSR598TIR_ChIP_ZNF507_K562_ENCSR584USG_counts_pattern_3.n_436-vs-ZNF507-205.alignment counts-znf_b1h_alignment/ZNF507-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-205/pos_patterns.ENCSR598TIR_ChIP_ZNF507_K562_ENCSR584USG_counts_pattern_4.n_404-vs-ZNF507-205.alignment counts-znf_b1h_alignment/ZNF507-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-205/pos_patterns.ENCSR598TIR_ChIP_ZNF507_K562_ENCSR584USG_counts_pattern_5.n_322-vs-ZNF507-205.alignment counts-znf_b1h_alignment/ZNF507-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-205/pos_patterns.ENCSR598TIR_ChIP_ZNF507_K562_ENCSR584USG_counts_pattern_6.n_139-vs-ZNF507-205.alignment counts-znf_b1h_alignment/ZNF507-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF507-205/pos_patterns.ENCSR598TIR_ChIP_ZNF507_K562_ENCSR584USG_counts_pattern_7.n_50-vs-ZNF507-205.alignment counts-znf_b1h_alignment/ZNF507-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF510-201/pos_patterns.ENCSR595FAO_ChIP_ZNF510_HEK293_ENCSR226RHX_counts_pattern_0.n_2907-vs-ZNF510-201.alignment counts-znf_b1h_alignment/ZNF510-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF510-201/pos_patterns.ENCSR595FAO_ChIP_ZNF510_HEK293_ENCSR226RHX_counts_pattern_1.n_832-vs-ZNF510-201.alignment counts-znf_b1h_alignment/ZNF510-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF510-201/pos_patterns.ENCSR595FAO_ChIP_ZNF510_HEK293_ENCSR226RHX_counts_pattern_2.n_157-vs-ZNF510-201.alignment counts-znf_b1h_alignment/ZNF510-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF510-201/pos_patterns.ENCSR595FAO_ChIP_ZNF510_HEK293_ENCSR226RHX_counts_pattern_3.n_125-vs-ZNF510-201.alignment counts-znf_b1h_alignment/ZNF510-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF510-201/pos_patterns.ENCSR595FAO_ChIP_ZNF510_HEK293_ENCSR226RHX_counts_pattern_4.n_80-vs-ZNF510-201.alignment counts-znf_b1h_alignment/ZNF510-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF510-201/pos_patterns.ENCSR595FAO_ChIP_ZNF510_HEK293_ENCSR226RHX_counts_pattern_5.n_62-vs-ZNF510-201.alignment counts-znf_b1h_alignment/ZNF510-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF510-201/pos_patterns.ENCSR595FAO_ChIP_ZNF510_HEK293_ENCSR226RHX_counts_pattern_6.n_37-vs-ZNF510-201.alignment counts-znf_b1h_alignment/ZNF510-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF510-201/pos_patterns.ENCSR595FAO_ChIP_ZNF510_HEK293_ENCSR226RHX_counts_pattern_7.n_24-vs-ZNF510-201.alignment counts-znf_b1h_alignment/ZNF510-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF510-201/pos_patterns.ENCSR595FAO_ChIP_ZNF510_HEK293_ENCSR226RHX_counts_pattern_8.n_23-vs-ZNF510-201.alignment counts-znf_b1h_alignment/ZNF510-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF510-201/pos_patterns.ENCSR695SLS_ChIP_ZNF510_HepG2_ENCSR522HFZ_counts_pattern_0.n_787-vs-ZNF510-201.alignment counts-znf_b1h_alignment/ZNF510-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF510-201/pos_patterns.ENCSR695SLS_ChIP_ZNF510_HepG2_ENCSR522HFZ_counts_pattern_10.n_415-vs-ZNF510-201.alignment counts-znf_b1h_alignment/ZNF510-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF510-201/pos_patterns.ENCSR695SLS_ChIP_ZNF510_HepG2_ENCSR522HFZ_counts_pattern_11.n_400-vs-ZNF510-201.alignment counts-znf_b1h_alignment/ZNF510-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF510-201/pos_patterns.ENCSR695SLS_ChIP_ZNF510_HepG2_ENCSR522HFZ_counts_pattern_12.n_346-vs-ZNF510-201.alignment counts-znf_b1h_alignment/ZNF510-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF510-201/pos_patterns.ENCSR695SLS_ChIP_ZNF510_HepG2_ENCSR522HFZ_counts_pattern_13.n_319-vs-ZNF510-201.alignment counts-znf_b1h_alignment/ZNF510-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF510-201/pos_patterns.ENCSR695SLS_ChIP_ZNF510_HepG2_ENCSR522HFZ_counts_pattern_14.n_312-vs-ZNF510-201.alignment counts-znf_b1h_alignment/ZNF510-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF510-201/pos_patterns.ENCSR695SLS_ChIP_ZNF510_HepG2_ENCSR522HFZ_counts_pattern_15.n_302-vs-ZNF510-201.alignment counts-znf_b1h_alignment/ZNF510-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF510-201/pos_patterns.ENCSR695SLS_ChIP_ZNF510_HepG2_ENCSR522HFZ_counts_pattern_16.n_294-vs-ZNF510-201.alignment counts-znf_b1h_alignment/ZNF510-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF510-201/pos_patterns.ENCSR695SLS_ChIP_ZNF510_HepG2_ENCSR522HFZ_counts_pattern_17.n_276-vs-ZNF510-201.alignment counts-znf_b1h_alignment/ZNF510-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF510-201/pos_patterns.ENCSR695SLS_ChIP_ZNF510_HepG2_ENCSR522HFZ_counts_pattern_18.n_222-vs-ZNF510-201.alignment counts-znf_b1h_alignment/ZNF510-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF510-201/pos_patterns.ENCSR695SLS_ChIP_ZNF510_HepG2_ENCSR522HFZ_counts_pattern_19.n_220-vs-ZNF510-201.alignment counts-znf_b1h_alignment/ZNF510-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF510-201/pos_patterns.ENCSR695SLS_ChIP_ZNF510_HepG2_ENCSR522HFZ_counts_pattern_1.n_737-vs-ZNF510-201.alignment counts-znf_b1h_alignment/ZNF510-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF510-201/pos_patterns.ENCSR695SLS_ChIP_ZNF510_HepG2_ENCSR522HFZ_counts_pattern_20.n_155-vs-ZNF510-201.alignment counts-znf_b1h_alignment/ZNF510-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF510-201/pos_patterns.ENCSR695SLS_ChIP_ZNF510_HepG2_ENCSR522HFZ_counts_pattern_21.n_132-vs-ZNF510-201.alignment counts-znf_b1h_alignment/ZNF510-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF510-201/pos_patterns.ENCSR695SLS_ChIP_ZNF510_HepG2_ENCSR522HFZ_counts_pattern_22.n_114-vs-ZNF510-201.alignment counts-znf_b1h_alignment/ZNF510-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF510-201/pos_patterns.ENCSR695SLS_ChIP_ZNF510_HepG2_ENCSR522HFZ_counts_pattern_23.n_103-vs-ZNF510-201.alignment counts-znf_b1h_alignment/ZNF510-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF510-201/pos_patterns.ENCSR695SLS_ChIP_ZNF510_HepG2_ENCSR522HFZ_counts_pattern_24.n_98-vs-ZNF510-201.alignment counts-znf_b1h_alignment/ZNF510-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF510-201/pos_patterns.ENCSR695SLS_ChIP_ZNF510_HepG2_ENCSR522HFZ_counts_pattern_25.n_97-vs-ZNF510-201.alignment counts-znf_b1h_alignment/ZNF510-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF510-201/pos_patterns.ENCSR695SLS_ChIP_ZNF510_HepG2_ENCSR522HFZ_counts_pattern_26.n_84-vs-ZNF510-201.alignment counts-znf_b1h_alignment/ZNF510-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF510-201/pos_patterns.ENCSR695SLS_ChIP_ZNF510_HepG2_ENCSR522HFZ_counts_pattern_27.n_47-vs-ZNF510-201.alignment counts-znf_b1h_alignment/ZNF510-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF510-201/pos_patterns.ENCSR695SLS_ChIP_ZNF510_HepG2_ENCSR522HFZ_counts_pattern_2.n_670-vs-ZNF510-201.alignment counts-znf_b1h_alignment/ZNF510-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF510-201/pos_patterns.ENCSR695SLS_ChIP_ZNF510_HepG2_ENCSR522HFZ_counts_pattern_3.n_634-vs-ZNF510-201.alignment counts-znf_b1h_alignment/ZNF510-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF510-201/pos_patterns.ENCSR695SLS_ChIP_ZNF510_HepG2_ENCSR522HFZ_counts_pattern_4.n_581-vs-ZNF510-201.alignment counts-znf_b1h_alignment/ZNF510-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF510-201/pos_patterns.ENCSR695SLS_ChIP_ZNF510_HepG2_ENCSR522HFZ_counts_pattern_5.n_565-vs-ZNF510-201.alignment counts-znf_b1h_alignment/ZNF510-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF510-201/pos_patterns.ENCSR695SLS_ChIP_ZNF510_HepG2_ENCSR522HFZ_counts_pattern_6.n_560-vs-ZNF510-201.alignment counts-znf_b1h_alignment/ZNF510-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF510-201/pos_patterns.ENCSR695SLS_ChIP_ZNF510_HepG2_ENCSR522HFZ_counts_pattern_7.n_456-vs-ZNF510-201.alignment counts-znf_b1h_alignment/ZNF510-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF510-201/pos_patterns.ENCSR695SLS_ChIP_ZNF510_HepG2_ENCSR522HFZ_counts_pattern_8.n_451-vs-ZNF510-201.alignment counts-znf_b1h_alignment/ZNF510-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF510-201/pos_patterns.ENCSR695SLS_ChIP_ZNF510_HepG2_ENCSR522HFZ_counts_pattern_9.n_442-vs-ZNF510-201.alignment counts-znf_b1h_alignment/ZNF510-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512-201/neg_patterns.ENCSR591CCL_ChIP_ZNF512_K562_ENCSR877KXA_counts_pattern_0.n_60-vs-ZNF512-201.alignment counts-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR264SRY_ChIP_ZNF512_HepG2_ENCSR097ZVU_counts_pattern_0.n_2756-vs-ZNF512-201.alignment counts-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR264SRY_ChIP_ZNF512_HepG2_ENCSR097ZVU_counts_pattern_1.n_917-vs-ZNF512-201.alignment counts-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR264SRY_ChIP_ZNF512_HepG2_ENCSR097ZVU_counts_pattern_2.n_871-vs-ZNF512-201.alignment counts-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR264SRY_ChIP_ZNF512_HepG2_ENCSR097ZVU_counts_pattern_3.n_261-vs-ZNF512-201.alignment counts-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR264SRY_ChIP_ZNF512_HepG2_ENCSR097ZVU_counts_pattern_4.n_194-vs-ZNF512-201.alignment counts-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR264SRY_ChIP_ZNF512_HepG2_ENCSR097ZVU_counts_pattern_5.n_38-vs-ZNF512-201.alignment counts-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR264SRY_ChIP_ZNF512_HepG2_ENCSR097ZVU_counts_pattern_6.n_21-vs-ZNF512-201.alignment counts-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR591CCL_ChIP_ZNF512_K562_ENCSR877KXA_counts_pattern_0.n_10997-vs-ZNF512-201.alignment counts-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR591CCL_ChIP_ZNF512_K562_ENCSR877KXA_counts_pattern_1.n_1160-vs-ZNF512-201.alignment counts-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR591CCL_ChIP_ZNF512_K562_ENCSR877KXA_counts_pattern_2.n_1091-vs-ZNF512-201.alignment counts-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR591CCL_ChIP_ZNF512_K562_ENCSR877KXA_counts_pattern_3.n_1069-vs-ZNF512-201.alignment counts-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR591CCL_ChIP_ZNF512_K562_ENCSR877KXA_counts_pattern_4.n_45-vs-ZNF512-201.alignment counts-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR634WRC_ChIP_ZNF512_WTC11_ENCSR391WIQ_counts_pattern_0.n_4892-vs-ZNF512-201.alignment counts-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR634WRC_ChIP_ZNF512_WTC11_ENCSR391WIQ_counts_pattern_1.n_1707-vs-ZNF512-201.alignment counts-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR634WRC_ChIP_ZNF512_WTC11_ENCSR391WIQ_counts_pattern_2.n_1349-vs-ZNF512-201.alignment counts-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR634WRC_ChIP_ZNF512_WTC11_ENCSR391WIQ_counts_pattern_3.n_606-vs-ZNF512-201.alignment counts-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR634WRC_ChIP_ZNF512_WTC11_ENCSR391WIQ_counts_pattern_4.n_166-vs-ZNF512-201.alignment counts-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR634WRC_ChIP_ZNF512_WTC11_ENCSR391WIQ_counts_pattern_5.n_70-vs-ZNF512-201.alignment counts-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR696URR_ChIP_ZNF512_K562_ENCSR702IRU_counts_pattern_0.n_2906-vs-ZNF512-201.alignment counts-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR696URR_ChIP_ZNF512_K562_ENCSR702IRU_counts_pattern_1.n_1904-vs-ZNF512-201.alignment counts-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR696URR_ChIP_ZNF512_K562_ENCSR702IRU_counts_pattern_2.n_1485-vs-ZNF512-201.alignment counts-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR696URR_ChIP_ZNF512_K562_ENCSR702IRU_counts_pattern_3.n_1467-vs-ZNF512-201.alignment counts-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR696URR_ChIP_ZNF512_K562_ENCSR702IRU_counts_pattern_4.n_657-vs-ZNF512-201.alignment counts-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR696URR_ChIP_ZNF512_K562_ENCSR702IRU_counts_pattern_5.n_253-vs-ZNF512-201.alignment counts-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR696URR_ChIP_ZNF512_K562_ENCSR702IRU_counts_pattern_6.n_91-vs-ZNF512-201.alignment counts-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR555DCF_ChIP_ZNF512B_MCF-7_ENCSR977OKO_counts_pattern_0.n_283-vs-ZNF512B-201.alignment counts-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR555DCF_ChIP_ZNF512B_MCF-7_ENCSR977OKO_counts_pattern_1.n_270-vs-ZNF512B-201.alignment counts-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR555DCF_ChIP_ZNF512B_MCF-7_ENCSR977OKO_counts_pattern_2.n_259-vs-ZNF512B-201.alignment counts-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR555DCF_ChIP_ZNF512B_MCF-7_ENCSR977OKO_counts_pattern_3.n_140-vs-ZNF512B-201.alignment counts-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR555DCF_ChIP_ZNF512B_MCF-7_ENCSR977OKO_counts_pattern_4.n_130-vs-ZNF512B-201.alignment counts-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR555DCF_ChIP_ZNF512B_MCF-7_ENCSR977OKO_counts_pattern_5.n_119-vs-ZNF512B-201.alignment counts-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR555DCF_ChIP_ZNF512B_MCF-7_ENCSR977OKO_counts_pattern_6.n_83-vs-ZNF512B-201.alignment counts-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR555DCF_ChIP_ZNF512B_MCF-7_ENCSR977OKO_counts_pattern_7.n_61-vs-ZNF512B-201.alignment counts-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR555DCF_ChIP_ZNF512B_MCF-7_ENCSR977OKO_counts_pattern_8.n_43-vs-ZNF512B-201.alignment counts-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR761LRR_ChIP_ZNF512B_MCF-7_ENCSR741WHN_counts_pattern_0.n_497-vs-ZNF512B-201.alignment counts-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR761LRR_ChIP_ZNF512B_MCF-7_ENCSR741WHN_counts_pattern_1.n_485-vs-ZNF512B-201.alignment counts-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR761LRR_ChIP_ZNF512B_MCF-7_ENCSR741WHN_counts_pattern_2.n_468-vs-ZNF512B-201.alignment counts-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR761LRR_ChIP_ZNF512B_MCF-7_ENCSR741WHN_counts_pattern_3.n_265-vs-ZNF512B-201.alignment counts-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR761LRR_ChIP_ZNF512B_MCF-7_ENCSR741WHN_counts_pattern_4.n_254-vs-ZNF512B-201.alignment counts-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR761LRR_ChIP_ZNF512B_MCF-7_ENCSR741WHN_counts_pattern_5.n_216-vs-ZNF512B-201.alignment counts-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR761LRR_ChIP_ZNF512B_MCF-7_ENCSR741WHN_counts_pattern_6.n_74-vs-ZNF512B-201.alignment counts-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR761LRR_ChIP_ZNF512B_MCF-7_ENCSR741WHN_counts_pattern_7.n_72-vs-ZNF512B-201.alignment counts-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR761LRR_ChIP_ZNF512B_MCF-7_ENCSR741WHN_counts_pattern_8.n_36-vs-ZNF512B-201.alignment counts-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR801SNX_ChIP_ZNF512B_HepG2_ENCSR478GME_counts_pattern_0.n_1509-vs-ZNF512B-201.alignment counts-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR801SNX_ChIP_ZNF512B_HepG2_ENCSR478GME_counts_pattern_10.n_113-vs-ZNF512B-201.alignment counts-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR801SNX_ChIP_ZNF512B_HepG2_ENCSR478GME_counts_pattern_11.n_41-vs-ZNF512B-201.alignment counts-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR801SNX_ChIP_ZNF512B_HepG2_ENCSR478GME_counts_pattern_1.n_1501-vs-ZNF512B-201.alignment counts-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR801SNX_ChIP_ZNF512B_HepG2_ENCSR478GME_counts_pattern_2.n_814-vs-ZNF512B-201.alignment counts-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR801SNX_ChIP_ZNF512B_HepG2_ENCSR478GME_counts_pattern_3.n_729-vs-ZNF512B-201.alignment counts-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR801SNX_ChIP_ZNF512B_HepG2_ENCSR478GME_counts_pattern_4.n_718-vs-ZNF512B-201.alignment counts-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR801SNX_ChIP_ZNF512B_HepG2_ENCSR478GME_counts_pattern_5.n_333-vs-ZNF512B-201.alignment counts-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR801SNX_ChIP_ZNF512B_HepG2_ENCSR478GME_counts_pattern_6.n_316-vs-ZNF512B-201.alignment counts-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR801SNX_ChIP_ZNF512B_HepG2_ENCSR478GME_counts_pattern_7.n_290-vs-ZNF512B-201.alignment counts-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR801SNX_ChIP_ZNF512B_HepG2_ENCSR478GME_counts_pattern_8.n_144-vs-ZNF512B-201.alignment counts-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR801SNX_ChIP_ZNF512B_HepG2_ENCSR478GME_counts_pattern_9.n_123-vs-ZNF512B-201.alignment counts-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-201/Hughes_GR_models_ZNF513_counts-pos.pattern_0.n_167-vs-ZNF513-201.alignment counts-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-201/neg_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_0.n_44-vs-ZNF513-201.alignment counts-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-201/neg_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_1.n_41-vs-ZNF513-201.alignment counts-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-201/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_0.n_655-vs-ZNF513-201.alignment counts-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-201/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_10.n_134-vs-ZNF513-201.alignment counts-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-201/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_11.n_131-vs-ZNF513-201.alignment counts-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-201/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_12.n_122-vs-ZNF513-201.alignment counts-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-201/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_13.n_104-vs-ZNF513-201.alignment counts-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-201/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_14.n_98-vs-ZNF513-201.alignment counts-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-201/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_15.n_94-vs-ZNF513-201.alignment counts-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-201/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_16.n_84-vs-ZNF513-201.alignment counts-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-201/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_17.n_83-vs-ZNF513-201.alignment counts-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-201/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_18.n_74-vs-ZNF513-201.alignment counts-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-201/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_19.n_73-vs-ZNF513-201.alignment counts-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-201/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_1.n_226-vs-ZNF513-201.alignment counts-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-201/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_20.n_70-vs-ZNF513-201.alignment counts-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-201/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_21.n_54-vs-ZNF513-201.alignment counts-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-201/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_22.n_54-vs-ZNF513-201.alignment counts-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-201/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_23.n_52-vs-ZNF513-201.alignment counts-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-201/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_24.n_49-vs-ZNF513-201.alignment counts-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-201/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_2.n_214-vs-ZNF513-201.alignment counts-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-201/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_3.n_184-vs-ZNF513-201.alignment counts-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-201/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_4.n_182-vs-ZNF513-201.alignment counts-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-201/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_5.n_163-vs-ZNF513-201.alignment counts-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-201/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_6.n_157-vs-ZNF513-201.alignment counts-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-201/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_7.n_148-vs-ZNF513-201.alignment counts-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-201/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_8.n_135-vs-ZNF513-201.alignment counts-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-201/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_9.n_135-vs-ZNF513-201.alignment counts-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-201/pos_patterns.ENCSR503DPC_ChIP_ZNF513_HEK293_ENCSR717PMC_counts_pattern_0.n_11192-vs-ZNF513-201.alignment counts-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-201/pos_patterns.ENCSR503DPC_ChIP_ZNF513_HEK293_ENCSR717PMC_counts_pattern_1.n_1010-vs-ZNF513-201.alignment counts-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-201/pos_patterns.ENCSR503DPC_ChIP_ZNF513_HEK293_ENCSR717PMC_counts_pattern_2.n_236-vs-ZNF513-201.alignment counts-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-201/pos_patterns.ENCSR503DPC_ChIP_ZNF513_HEK293_ENCSR717PMC_counts_pattern_3.n_211-vs-ZNF513-201.alignment counts-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-201/pos_patterns.ENCSR503DPC_ChIP_ZNF513_HEK293_ENCSR717PMC_counts_pattern_4.n_198-vs-ZNF513-201.alignment counts-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-202/Hughes_GR_models_ZNF513_counts-pos.pattern_0.n_167-vs-ZNF513-202.alignment counts-znf_b1h_alignment/ZNF513-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-202/neg_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_0.n_44-vs-ZNF513-202.alignment counts-znf_b1h_alignment/ZNF513-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-202/neg_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_1.n_41-vs-ZNF513-202.alignment counts-znf_b1h_alignment/ZNF513-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-202/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_0.n_655-vs-ZNF513-202.alignment counts-znf_b1h_alignment/ZNF513-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-202/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_10.n_134-vs-ZNF513-202.alignment counts-znf_b1h_alignment/ZNF513-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-202/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_11.n_131-vs-ZNF513-202.alignment counts-znf_b1h_alignment/ZNF513-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-202/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_12.n_122-vs-ZNF513-202.alignment counts-znf_b1h_alignment/ZNF513-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-202/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_13.n_104-vs-ZNF513-202.alignment counts-znf_b1h_alignment/ZNF513-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-202/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_14.n_98-vs-ZNF513-202.alignment counts-znf_b1h_alignment/ZNF513-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-202/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_15.n_94-vs-ZNF513-202.alignment counts-znf_b1h_alignment/ZNF513-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-202/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_16.n_84-vs-ZNF513-202.alignment counts-znf_b1h_alignment/ZNF513-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-202/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_17.n_83-vs-ZNF513-202.alignment counts-znf_b1h_alignment/ZNF513-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-202/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_18.n_74-vs-ZNF513-202.alignment counts-znf_b1h_alignment/ZNF513-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-202/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_19.n_73-vs-ZNF513-202.alignment counts-znf_b1h_alignment/ZNF513-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-202/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_1.n_226-vs-ZNF513-202.alignment counts-znf_b1h_alignment/ZNF513-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-202/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_20.n_70-vs-ZNF513-202.alignment counts-znf_b1h_alignment/ZNF513-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-202/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_21.n_54-vs-ZNF513-202.alignment counts-znf_b1h_alignment/ZNF513-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-202/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_22.n_54-vs-ZNF513-202.alignment counts-znf_b1h_alignment/ZNF513-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-202/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_23.n_52-vs-ZNF513-202.alignment counts-znf_b1h_alignment/ZNF513-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-202/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_24.n_49-vs-ZNF513-202.alignment counts-znf_b1h_alignment/ZNF513-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-202/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_2.n_214-vs-ZNF513-202.alignment counts-znf_b1h_alignment/ZNF513-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-202/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_3.n_184-vs-ZNF513-202.alignment counts-znf_b1h_alignment/ZNF513-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-202/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_4.n_182-vs-ZNF513-202.alignment counts-znf_b1h_alignment/ZNF513-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-202/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_5.n_163-vs-ZNF513-202.alignment counts-znf_b1h_alignment/ZNF513-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-202/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_6.n_157-vs-ZNF513-202.alignment counts-znf_b1h_alignment/ZNF513-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-202/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_7.n_148-vs-ZNF513-202.alignment counts-znf_b1h_alignment/ZNF513-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-202/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_8.n_135-vs-ZNF513-202.alignment counts-znf_b1h_alignment/ZNF513-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-202/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_counts_pattern_9.n_135-vs-ZNF513-202.alignment counts-znf_b1h_alignment/ZNF513-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-202/pos_patterns.ENCSR503DPC_ChIP_ZNF513_HEK293_ENCSR717PMC_counts_pattern_0.n_11192-vs-ZNF513-202.alignment counts-znf_b1h_alignment/ZNF513-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-202/pos_patterns.ENCSR503DPC_ChIP_ZNF513_HEK293_ENCSR717PMC_counts_pattern_1.n_1010-vs-ZNF513-202.alignment counts-znf_b1h_alignment/ZNF513-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-202/pos_patterns.ENCSR503DPC_ChIP_ZNF513_HEK293_ENCSR717PMC_counts_pattern_2.n_236-vs-ZNF513-202.alignment counts-znf_b1h_alignment/ZNF513-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-202/pos_patterns.ENCSR503DPC_ChIP_ZNF513_HEK293_ENCSR717PMC_counts_pattern_3.n_211-vs-ZNF513-202.alignment counts-znf_b1h_alignment/ZNF513-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF513-202/pos_patterns.ENCSR503DPC_ChIP_ZNF513_HEK293_ENCSR717PMC_counts_pattern_4.n_198-vs-ZNF513-202.alignment counts-znf_b1h_alignment/ZNF513-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF514-201/pos_patterns.ENCSR897RVP_ChIP_ZNF514_HEK293_ENCSR843JEN_counts_pattern_0.n_944-vs-ZNF514-201.alignment counts-znf_b1h_alignment/ZNF514-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF514-201/pos_patterns.ENCSR897RVP_ChIP_ZNF514_HEK293_ENCSR843JEN_counts_pattern_1.n_66-vs-ZNF514-201.alignment counts-znf_b1h_alignment/ZNF514-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF518B-201/neg_patterns.ENCSR597CHL_ChIP_ZNF518B_K562_ENCSR571JPM_counts_pattern_0.n_278-vs-ZNF518B-201.alignment counts-znf_b1h_alignment/ZNF518B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF518B-201/neg_patterns.ENCSR597CHL_ChIP_ZNF518B_K562_ENCSR571JPM_counts_pattern_1.n_95-vs-ZNF518B-201.alignment counts-znf_b1h_alignment/ZNF518B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF518B-201/neg_patterns.ENCSR597CHL_ChIP_ZNF518B_K562_ENCSR571JPM_counts_pattern_2.n_55-vs-ZNF518B-201.alignment counts-znf_b1h_alignment/ZNF518B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF518B-201/neg_patterns.ENCSR597CHL_ChIP_ZNF518B_K562_ENCSR571JPM_counts_pattern_3.n_45-vs-ZNF518B-201.alignment counts-znf_b1h_alignment/ZNF518B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF518B-201/pos_patterns.ENCSR597CHL_ChIP_ZNF518B_K562_ENCSR571JPM_counts_pattern_0.n_63-vs-ZNF518B-201.alignment counts-znf_b1h_alignment/ZNF518B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF518B-201/pos_patterns.ENCSR597CHL_ChIP_ZNF518B_K562_ENCSR571JPM_counts_pattern_1.n_47-vs-ZNF518B-201.alignment counts-znf_b1h_alignment/ZNF518B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF518B-201/pos_patterns.ENCSR597CHL_ChIP_ZNF518B_K562_ENCSR571JPM_counts_pattern_2.n_43-vs-ZNF518B-201.alignment counts-znf_b1h_alignment/ZNF518B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF518B-201/pos_patterns.ENCSR597CHL_ChIP_ZNF518B_K562_ENCSR571JPM_counts_pattern_3.n_38-vs-ZNF518B-201.alignment counts-znf_b1h_alignment/ZNF518B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF518B-201/pos_patterns.ENCSR597CHL_ChIP_ZNF518B_K562_ENCSR571JPM_counts_pattern_4.n_28-vs-ZNF518B-201.alignment counts-znf_b1h_alignment/ZNF518B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF518B-201/pos_patterns.ENCSR597CHL_ChIP_ZNF518B_K562_ENCSR571JPM_counts_pattern_5.n_21-vs-ZNF518B-201.alignment counts-znf_b1h_alignment/ZNF518B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF518B-201/pos_patterns.ENCSR597CHL_ChIP_ZNF518B_K562_ENCSR571JPM_counts_pattern_6.n_20-vs-ZNF518B-201.alignment counts-znf_b1h_alignment/ZNF518B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF519-207/ChipExo_models_ZNF519_counts-pos.pattern_0.n_13230-vs-ZNF519-207.alignment counts-znf_b1h_alignment/ZNF519-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF519-207/ChipExo_models_ZNF519_counts-pos.pattern_1.n_652-vs-ZNF519-207.alignment counts-znf_b1h_alignment/ZNF519-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF519-207/Hughes_NB_models_ZNF519_counts-pos.pattern_0.n_823-vs-ZNF519-207.alignment counts-znf_b1h_alignment/ZNF519-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF519-207/Hughes_NB_models_ZNF519_counts-pos.pattern_1.n_110-vs-ZNF519-207.alignment counts-znf_b1h_alignment/ZNF519-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF519-207/Hughes_NB_models_ZNF519_counts-pos.pattern_2.n_85-vs-ZNF519-207.alignment counts-znf_b1h_alignment/ZNF519-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF519-207/Hughes_NB_models_ZNF519_counts-pos.pattern_3.n_53-vs-ZNF519-207.alignment counts-znf_b1h_alignment/ZNF519-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF521-201/pos_patterns.ENCSR665KYH_ChIP_ZNF521_HEK293_ENCSR221LRI_counts_pattern_0.n_200-vs-ZNF521-201.alignment counts-znf_b1h_alignment/ZNF521-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF521-201/pos_patterns.ENCSR665KYH_ChIP_ZNF521_HEK293_ENCSR221LRI_counts_pattern_1.n_93-vs-ZNF521-201.alignment counts-znf_b1h_alignment/ZNF521-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF521-201/pos_patterns.ENCSR665KYH_ChIP_ZNF521_HEK293_ENCSR221LRI_counts_pattern_2.n_90-vs-ZNF521-201.alignment counts-znf_b1h_alignment/ZNF521-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF521-201/pos_patterns.ENCSR665KYH_ChIP_ZNF521_HEK293_ENCSR221LRI_counts_pattern_3.n_60-vs-ZNF521-201.alignment counts-znf_b1h_alignment/ZNF521-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF521-201/pos_patterns.ENCSR665KYH_ChIP_ZNF521_HEK293_ENCSR221LRI_counts_pattern_4.n_38-vs-ZNF521-201.alignment counts-znf_b1h_alignment/ZNF521-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF521-202/pos_patterns.ENCSR665KYH_ChIP_ZNF521_HEK293_ENCSR221LRI_counts_pattern_0.n_200-vs-ZNF521-202.alignment counts-znf_b1h_alignment/ZNF521-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF521-202/pos_patterns.ENCSR665KYH_ChIP_ZNF521_HEK293_ENCSR221LRI_counts_pattern_1.n_93-vs-ZNF521-202.alignment counts-znf_b1h_alignment/ZNF521-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF521-202/pos_patterns.ENCSR665KYH_ChIP_ZNF521_HEK293_ENCSR221LRI_counts_pattern_2.n_90-vs-ZNF521-202.alignment counts-znf_b1h_alignment/ZNF521-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF521-202/pos_patterns.ENCSR665KYH_ChIP_ZNF521_HEK293_ENCSR221LRI_counts_pattern_3.n_60-vs-ZNF521-202.alignment counts-znf_b1h_alignment/ZNF521-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF521-202/pos_patterns.ENCSR665KYH_ChIP_ZNF521_HEK293_ENCSR221LRI_counts_pattern_4.n_38-vs-ZNF521-202.alignment counts-znf_b1h_alignment/ZNF521-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF524-201/Hughes_GR_models_ZNF524_counts-pos.pattern_0.n_362-vs-ZNF524-201.alignment counts-znf_b1h_alignment/ZNF524-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF525-201/ChipExo_models_ZNF525_counts-pos.pattern_0.n_214-vs-ZNF525-201.alignment counts-znf_b1h_alignment/ZNF525-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF525-201/ChipExo_models_ZNF525_counts-pos.pattern_1.n_29-vs-ZNF525-201.alignment counts-znf_b1h_alignment/ZNF525-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF526-201/pos_patterns.ENCSR608XRC_ChIP_ZNF526_HepG2_ENCSR770ZUH_counts_pattern_0.n_2315-vs-ZNF526-201.alignment counts-znf_b1h_alignment/ZNF526-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF526-201/pos_patterns.ENCSR608XRC_ChIP_ZNF526_HepG2_ENCSR770ZUH_counts_pattern_10.n_67-vs-ZNF526-201.alignment counts-znf_b1h_alignment/ZNF526-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF526-201/pos_patterns.ENCSR608XRC_ChIP_ZNF526_HepG2_ENCSR770ZUH_counts_pattern_11.n_53-vs-ZNF526-201.alignment counts-znf_b1h_alignment/ZNF526-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF526-201/pos_patterns.ENCSR608XRC_ChIP_ZNF526_HepG2_ENCSR770ZUH_counts_pattern_12.n_43-vs-ZNF526-201.alignment counts-znf_b1h_alignment/ZNF526-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF526-201/pos_patterns.ENCSR608XRC_ChIP_ZNF526_HepG2_ENCSR770ZUH_counts_pattern_13.n_30-vs-ZNF526-201.alignment counts-znf_b1h_alignment/ZNF526-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF526-201/pos_patterns.ENCSR608XRC_ChIP_ZNF526_HepG2_ENCSR770ZUH_counts_pattern_1.n_667-vs-ZNF526-201.alignment counts-znf_b1h_alignment/ZNF526-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF526-201/pos_patterns.ENCSR608XRC_ChIP_ZNF526_HepG2_ENCSR770ZUH_counts_pattern_2.n_419-vs-ZNF526-201.alignment counts-znf_b1h_alignment/ZNF526-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF526-201/pos_patterns.ENCSR608XRC_ChIP_ZNF526_HepG2_ENCSR770ZUH_counts_pattern_3.n_204-vs-ZNF526-201.alignment counts-znf_b1h_alignment/ZNF526-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF526-201/pos_patterns.ENCSR608XRC_ChIP_ZNF526_HepG2_ENCSR770ZUH_counts_pattern_4.n_153-vs-ZNF526-201.alignment counts-znf_b1h_alignment/ZNF526-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF526-201/pos_patterns.ENCSR608XRC_ChIP_ZNF526_HepG2_ENCSR770ZUH_counts_pattern_5.n_146-vs-ZNF526-201.alignment counts-znf_b1h_alignment/ZNF526-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF526-201/pos_patterns.ENCSR608XRC_ChIP_ZNF526_HepG2_ENCSR770ZUH_counts_pattern_6.n_140-vs-ZNF526-201.alignment counts-znf_b1h_alignment/ZNF526-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF526-201/pos_patterns.ENCSR608XRC_ChIP_ZNF526_HepG2_ENCSR770ZUH_counts_pattern_7.n_140-vs-ZNF526-201.alignment counts-znf_b1h_alignment/ZNF526-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF526-201/pos_patterns.ENCSR608XRC_ChIP_ZNF526_HepG2_ENCSR770ZUH_counts_pattern_8.n_108-vs-ZNF526-201.alignment counts-znf_b1h_alignment/ZNF526-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF526-201/pos_patterns.ENCSR608XRC_ChIP_ZNF526_HepG2_ENCSR770ZUH_counts_pattern_9.n_93-vs-ZNF526-201.alignment counts-znf_b1h_alignment/ZNF526-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF527-201/ChipExo_models_ZNF527_counts-pos.pattern_0.n_133-vs-ZNF527-201.alignment counts-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF527-201/ChipExo_models_ZNF527_counts-pos.pattern_1.n_38-vs-ZNF527-201.alignment counts-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF527-201/ChipExo_models_ZNF527_counts-pos.pattern_2.n_21-vs-ZNF527-201.alignment counts-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF527-201/neg_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_counts_pattern_0.n_380-vs-ZNF527-201.alignment counts-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF527-201/neg_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_counts_pattern_1.n_334-vs-ZNF527-201.alignment counts-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF527-201/neg_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_counts_pattern_2.n_45-vs-ZNF527-201.alignment counts-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF527-201/neg_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_counts_pattern_3.n_39-vs-ZNF527-201.alignment counts-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF527-201/neg_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_counts_pattern_4.n_32-vs-ZNF527-201.alignment counts-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF527-201/neg_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_counts_pattern_5.n_30-vs-ZNF527-201.alignment counts-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF527-201/neg_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_counts_pattern_6.n_29-vs-ZNF527-201.alignment counts-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF527-201/neg_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_counts_pattern_7.n_24-vs-ZNF527-201.alignment counts-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF527-201/neg_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_counts_pattern_8.n_23-vs-ZNF527-201.alignment counts-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF527-201/neg_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_counts_pattern_9.n_23-vs-ZNF527-201.alignment counts-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF527-201/pos_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_counts_pattern_0.n_1418-vs-ZNF527-201.alignment counts-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF527-201/pos_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_counts_pattern_10.n_140-vs-ZNF527-201.alignment counts-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF527-201/pos_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_counts_pattern_11.n_138-vs-ZNF527-201.alignment counts-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF527-201/pos_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_counts_pattern_12.n_90-vs-ZNF527-201.alignment counts-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF527-201/pos_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_counts_pattern_13.n_47-vs-ZNF527-201.alignment counts-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF527-201/pos_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_counts_pattern_14.n_42-vs-ZNF527-201.alignment counts-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF527-201/pos_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_counts_pattern_15.n_41-vs-ZNF527-201.alignment counts-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF527-201/pos_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_counts_pattern_16.n_38-vs-ZNF527-201.alignment counts-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF527-201/pos_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_counts_pattern_17.n_28-vs-ZNF527-201.alignment counts-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF527-201/pos_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_counts_pattern_18.n_25-vs-ZNF527-201.alignment counts-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF527-201/pos_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_counts_pattern_1.n_1353-vs-ZNF527-201.alignment counts-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF527-201/pos_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_counts_pattern_2.n_964-vs-ZNF527-201.alignment counts-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF527-201/pos_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_counts_pattern_3.n_731-vs-ZNF527-201.alignment counts-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF527-201/pos_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_counts_pattern_4.n_443-vs-ZNF527-201.alignment counts-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF527-201/pos_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_counts_pattern_5.n_257-vs-ZNF527-201.alignment counts-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF527-201/pos_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_counts_pattern_6.n_203-vs-ZNF527-201.alignment counts-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF527-201/pos_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_counts_pattern_7.n_183-vs-ZNF527-201.alignment counts-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF527-201/pos_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_counts_pattern_8.n_167-vs-ZNF527-201.alignment counts-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF527-201/pos_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_counts_pattern_9.n_146-vs-ZNF527-201.alignment counts-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF528-201/ChipExo_models_ZNF528_counts-pos.pattern_0.n_1029-vs-ZNF528-201.alignment counts-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF528-201/Hughes_GR_models_ZNF528_counts-neg.pattern_0.n_82-vs-ZNF528-201.alignment counts-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF528-201/Hughes_GR_models_ZNF528_counts-neg.pattern_10.n_22-vs-ZNF528-201.alignment counts-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF528-201/Hughes_GR_models_ZNF528_counts-neg.pattern_11.n_21-vs-ZNF528-201.alignment counts-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF528-201/Hughes_GR_models_ZNF528_counts-neg.pattern_12.n_20-vs-ZNF528-201.alignment counts-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF528-201/Hughes_GR_models_ZNF528_counts-neg.pattern_1.n_65-vs-ZNF528-201.alignment counts-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF528-201/Hughes_GR_models_ZNF528_counts-neg.pattern_2.n_35-vs-ZNF528-201.alignment counts-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF528-201/Hughes_GR_models_ZNF528_counts-neg.pattern_3.n_33-vs-ZNF528-201.alignment counts-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF528-201/Hughes_GR_models_ZNF528_counts-neg.pattern_4.n_32-vs-ZNF528-201.alignment counts-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF528-201/Hughes_GR_models_ZNF528_counts-neg.pattern_5.n_30-vs-ZNF528-201.alignment counts-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF528-201/Hughes_GR_models_ZNF528_counts-neg.pattern_6.n_28-vs-ZNF528-201.alignment counts-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF528-201/Hughes_GR_models_ZNF528_counts-neg.pattern_7.n_28-vs-ZNF528-201.alignment counts-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF528-201/Hughes_GR_models_ZNF528_counts-neg.pattern_8.n_25-vs-ZNF528-201.alignment counts-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF528-201/Hughes_GR_models_ZNF528_counts-neg.pattern_9.n_23-vs-ZNF528-201.alignment counts-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF528-201/Hughes_GR_models_ZNF528_counts-pos.pattern_0.n_1774-vs-ZNF528-201.alignment counts-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF528-201/Hughes_GR_models_ZNF528_counts-pos.pattern_1.n_1041-vs-ZNF528-201.alignment counts-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF528-201/Hughes_GR_models_ZNF528_counts-pos.pattern_2.n_822-vs-ZNF528-201.alignment counts-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF528-201/Hughes_GR_models_ZNF528_counts-pos.pattern_3.n_332-vs-ZNF528-201.alignment counts-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF528-201/Hughes_GR_models_ZNF528_counts-pos.pattern_4.n_167-vs-ZNF528-201.alignment counts-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF528-201/Hughes_GR_models_ZNF528_counts-pos.pattern_5.n_130-vs-ZNF528-201.alignment counts-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF528-201/Hughes_GR_models_ZNF528_counts-pos.pattern_6.n_83-vs-ZNF528-201.alignment counts-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF528-201/Hughes_GR_models_ZNF528_counts-pos.pattern_7.n_43-vs-ZNF528-201.alignment counts-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF528-201/Hughes_GR_models_ZNF528_counts-pos.pattern_8.n_30-vs-ZNF528-201.alignment counts-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF528-201/Hughes_NB_models_ZNF528_counts-pos.pattern_0.n_4357-vs-ZNF528-201.alignment counts-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF528-201/Hughes_NB_models_ZNF528_counts-pos.pattern_1.n_741-vs-ZNF528-201.alignment counts-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF528-201/Hughes_NB_models_ZNF528_counts-pos.pattern_2.n_26-vs-ZNF528-201.alignment counts-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF529-209/ChipExo_models_ZNF529_counts-pos.pattern_0.n_395-vs-ZNF529-209.alignment counts-znf_b1h_alignment/ZNF529-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF529-209/ChipExo_models_ZNF529_counts-pos.pattern_1.n_28-vs-ZNF529-209.alignment counts-znf_b1h_alignment/ZNF529-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF529-209/pos_patterns.ENCSR754SOI_ChIP_ZNF529_HEK293_ENCSR207GCS_counts_pattern_0.n_1187-vs-ZNF529-209.alignment counts-znf_b1h_alignment/ZNF529-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF529-209/pos_patterns.ENCSR754SOI_ChIP_ZNF529_HEK293_ENCSR207GCS_counts_pattern_10.n_39-vs-ZNF529-209.alignment counts-znf_b1h_alignment/ZNF529-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF529-209/pos_patterns.ENCSR754SOI_ChIP_ZNF529_HEK293_ENCSR207GCS_counts_pattern_11.n_39-vs-ZNF529-209.alignment counts-znf_b1h_alignment/ZNF529-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF529-209/pos_patterns.ENCSR754SOI_ChIP_ZNF529_HEK293_ENCSR207GCS_counts_pattern_12.n_32-vs-ZNF529-209.alignment counts-znf_b1h_alignment/ZNF529-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF529-209/pos_patterns.ENCSR754SOI_ChIP_ZNF529_HEK293_ENCSR207GCS_counts_pattern_13.n_32-vs-ZNF529-209.alignment counts-znf_b1h_alignment/ZNF529-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF529-209/pos_patterns.ENCSR754SOI_ChIP_ZNF529_HEK293_ENCSR207GCS_counts_pattern_14.n_31-vs-ZNF529-209.alignment counts-znf_b1h_alignment/ZNF529-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF529-209/pos_patterns.ENCSR754SOI_ChIP_ZNF529_HEK293_ENCSR207GCS_counts_pattern_15.n_30-vs-ZNF529-209.alignment counts-znf_b1h_alignment/ZNF529-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF529-209/pos_patterns.ENCSR754SOI_ChIP_ZNF529_HEK293_ENCSR207GCS_counts_pattern_1.n_722-vs-ZNF529-209.alignment counts-znf_b1h_alignment/ZNF529-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF529-209/pos_patterns.ENCSR754SOI_ChIP_ZNF529_HEK293_ENCSR207GCS_counts_pattern_2.n_621-vs-ZNF529-209.alignment counts-znf_b1h_alignment/ZNF529-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF529-209/pos_patterns.ENCSR754SOI_ChIP_ZNF529_HEK293_ENCSR207GCS_counts_pattern_3.n_267-vs-ZNF529-209.alignment counts-znf_b1h_alignment/ZNF529-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF529-209/pos_patterns.ENCSR754SOI_ChIP_ZNF529_HEK293_ENCSR207GCS_counts_pattern_4.n_208-vs-ZNF529-209.alignment counts-znf_b1h_alignment/ZNF529-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF529-209/pos_patterns.ENCSR754SOI_ChIP_ZNF529_HEK293_ENCSR207GCS_counts_pattern_5.n_90-vs-ZNF529-209.alignment counts-znf_b1h_alignment/ZNF529-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF529-209/pos_patterns.ENCSR754SOI_ChIP_ZNF529_HEK293_ENCSR207GCS_counts_pattern_6.n_83-vs-ZNF529-209.alignment counts-znf_b1h_alignment/ZNF529-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF529-209/pos_patterns.ENCSR754SOI_ChIP_ZNF529_HEK293_ENCSR207GCS_counts_pattern_7.n_61-vs-ZNF529-209.alignment counts-znf_b1h_alignment/ZNF529-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF529-209/pos_patterns.ENCSR754SOI_ChIP_ZNF529_HEK293_ENCSR207GCS_counts_pattern_8.n_44-vs-ZNF529-209.alignment counts-znf_b1h_alignment/ZNF529-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF529-209/pos_patterns.ENCSR754SOI_ChIP_ZNF529_HEK293_ENCSR207GCS_counts_pattern_9.n_40-vs-ZNF529-209.alignment counts-znf_b1h_alignment/ZNF529-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF530-201/ChipExo_models_ZNF530_counts-pos.pattern_0.n_401-vs-ZNF530-201.alignment counts-znf_b1h_alignment/ZNF530-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF530-201/ChipExo_models_ZNF530_counts-pos.pattern_1.n_118-vs-ZNF530-201.alignment counts-znf_b1h_alignment/ZNF530-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF530-201/ChipExo_models_ZNF530_counts-pos.pattern_2.n_88-vs-ZNF530-201.alignment counts-znf_b1h_alignment/ZNF530-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF530-201/pos_patterns.ENCSR013DKM_ChIP_ZNF530_HepG2_ENCSR290MQH_counts_pattern_0.n_437-vs-ZNF530-201.alignment counts-znf_b1h_alignment/ZNF530-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF530-201/pos_patterns.ENCSR013DKM_ChIP_ZNF530_HepG2_ENCSR290MQH_counts_pattern_10.n_49-vs-ZNF530-201.alignment counts-znf_b1h_alignment/ZNF530-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF530-201/pos_patterns.ENCSR013DKM_ChIP_ZNF530_HepG2_ENCSR290MQH_counts_pattern_11.n_46-vs-ZNF530-201.alignment counts-znf_b1h_alignment/ZNF530-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF530-201/pos_patterns.ENCSR013DKM_ChIP_ZNF530_HepG2_ENCSR290MQH_counts_pattern_12.n_36-vs-ZNF530-201.alignment counts-znf_b1h_alignment/ZNF530-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF530-201/pos_patterns.ENCSR013DKM_ChIP_ZNF530_HepG2_ENCSR290MQH_counts_pattern_13.n_30-vs-ZNF530-201.alignment counts-znf_b1h_alignment/ZNF530-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF530-201/pos_patterns.ENCSR013DKM_ChIP_ZNF530_HepG2_ENCSR290MQH_counts_pattern_14.n_26-vs-ZNF530-201.alignment counts-znf_b1h_alignment/ZNF530-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF530-201/pos_patterns.ENCSR013DKM_ChIP_ZNF530_HepG2_ENCSR290MQH_counts_pattern_15.n_24-vs-ZNF530-201.alignment counts-znf_b1h_alignment/ZNF530-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF530-201/pos_patterns.ENCSR013DKM_ChIP_ZNF530_HepG2_ENCSR290MQH_counts_pattern_16.n_20-vs-ZNF530-201.alignment counts-znf_b1h_alignment/ZNF530-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF530-201/pos_patterns.ENCSR013DKM_ChIP_ZNF530_HepG2_ENCSR290MQH_counts_pattern_1.n_239-vs-ZNF530-201.alignment counts-znf_b1h_alignment/ZNF530-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF530-201/pos_patterns.ENCSR013DKM_ChIP_ZNF530_HepG2_ENCSR290MQH_counts_pattern_2.n_211-vs-ZNF530-201.alignment counts-znf_b1h_alignment/ZNF530-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF530-201/pos_patterns.ENCSR013DKM_ChIP_ZNF530_HepG2_ENCSR290MQH_counts_pattern_3.n_84-vs-ZNF530-201.alignment counts-znf_b1h_alignment/ZNF530-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF530-201/pos_patterns.ENCSR013DKM_ChIP_ZNF530_HepG2_ENCSR290MQH_counts_pattern_4.n_72-vs-ZNF530-201.alignment counts-znf_b1h_alignment/ZNF530-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF530-201/pos_patterns.ENCSR013DKM_ChIP_ZNF530_HepG2_ENCSR290MQH_counts_pattern_5.n_65-vs-ZNF530-201.alignment counts-znf_b1h_alignment/ZNF530-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF530-201/pos_patterns.ENCSR013DKM_ChIP_ZNF530_HepG2_ENCSR290MQH_counts_pattern_6.n_58-vs-ZNF530-201.alignment counts-znf_b1h_alignment/ZNF530-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF530-201/pos_patterns.ENCSR013DKM_ChIP_ZNF530_HepG2_ENCSR290MQH_counts_pattern_7.n_55-vs-ZNF530-201.alignment counts-znf_b1h_alignment/ZNF530-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF530-201/pos_patterns.ENCSR013DKM_ChIP_ZNF530_HepG2_ENCSR290MQH_counts_pattern_8.n_52-vs-ZNF530-201.alignment counts-znf_b1h_alignment/ZNF530-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF530-201/pos_patterns.ENCSR013DKM_ChIP_ZNF530_HepG2_ENCSR290MQH_counts_pattern_9.n_52-vs-ZNF530-201.alignment counts-znf_b1h_alignment/ZNF530-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF530-201/pos_patterns.ENCSR701RXW_ChIP_ZNF530_HEK293_ENCSR154RFY_counts_pattern_0.n_1089-vs-ZNF530-201.alignment counts-znf_b1h_alignment/ZNF530-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF530-201/pos_patterns.ENCSR701RXW_ChIP_ZNF530_HEK293_ENCSR154RFY_counts_pattern_1.n_760-vs-ZNF530-201.alignment counts-znf_b1h_alignment/ZNF530-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF530-201/pos_patterns.ENCSR701RXW_ChIP_ZNF530_HEK293_ENCSR154RFY_counts_pattern_2.n_326-vs-ZNF530-201.alignment counts-znf_b1h_alignment/ZNF530-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF530-201/pos_patterns.ENCSR701RXW_ChIP_ZNF530_HEK293_ENCSR154RFY_counts_pattern_3.n_189-vs-ZNF530-201.alignment counts-znf_b1h_alignment/ZNF530-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF530-201/pos_patterns.ENCSR701RXW_ChIP_ZNF530_HEK293_ENCSR154RFY_counts_pattern_4.n_84-vs-ZNF530-201.alignment counts-znf_b1h_alignment/ZNF530-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/neg_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_0.n_194-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/neg_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_10.n_50-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/neg_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_11.n_49-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/neg_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_12.n_43-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/neg_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_13.n_39-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/neg_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_14.n_31-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/neg_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_15.n_30-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/neg_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_16.n_25-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/neg_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_17.n_25-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/neg_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_18.n_23-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/neg_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_1.n_177-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/neg_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_2.n_151-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/neg_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_3.n_142-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/neg_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_4.n_128-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/neg_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_5.n_113-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/neg_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_6.n_92-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/neg_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_7.n_85-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/neg_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_8.n_74-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/neg_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_9.n_55-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/pos_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_0.n_377-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/pos_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_10.n_93-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/pos_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_11.n_93-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/pos_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_12.n_92-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/pos_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_13.n_88-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/pos_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_14.n_74-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/pos_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_15.n_69-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/pos_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_16.n_64-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/pos_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_17.n_62-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/pos_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_18.n_62-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/pos_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_19.n_61-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/pos_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_1.n_245-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/pos_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_20.n_53-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/pos_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_21.n_50-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/pos_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_22.n_41-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/pos_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_23.n_39-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/pos_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_24.n_38-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/pos_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_25.n_36-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/pos_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_26.n_21-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/pos_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_27.n_20-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/pos_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_2.n_170-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/pos_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_3.n_125-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/pos_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_4.n_120-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/pos_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_5.n_116-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/pos_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_6.n_106-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/pos_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_7.n_103-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/pos_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_8.n_95-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF532-201/pos_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_counts_pattern_9.n_94-vs-ZNF532-201.alignment counts-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF534-202/ChipExo_models_ZNF534_counts-pos.pattern_0.n_15039-vs-ZNF534-202.alignment counts-znf_b1h_alignment/ZNF534-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF534-202/ChipExo_models_ZNF534_counts-pos.pattern_1.n_12971-vs-ZNF534-202.alignment counts-znf_b1h_alignment/ZNF534-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF540-201/ChipExo_models_ZNF540_counts-pos.pattern_0.n_103-vs-ZNF540-201.alignment counts-znf_b1h_alignment/ZNF540-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF540-201/ChipExo_models_ZNF540_counts-pos.pattern_1.n_47-vs-ZNF540-201.alignment counts-znf_b1h_alignment/ZNF540-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF543-201/ChipExo_models_ZNF543_counts-pos.pattern_0.n_1674-vs-ZNF543-201.alignment counts-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF543-201/ChipExo_models_ZNF543_counts-pos.pattern_1.n_121-vs-ZNF543-201.alignment counts-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF543-201/Hughes_GR_models_ZNF543_counts-pos.pattern_0.n_36-vs-ZNF543-201.alignment counts-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF543-201/Hughes_GR_models_ZNF543_counts-pos.pattern_10.n_22-vs-ZNF543-201.alignment counts-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF543-201/Hughes_GR_models_ZNF543_counts-pos.pattern_11.n_22-vs-ZNF543-201.alignment counts-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF543-201/Hughes_GR_models_ZNF543_counts-pos.pattern_12.n_22-vs-ZNF543-201.alignment counts-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF543-201/Hughes_GR_models_ZNF543_counts-pos.pattern_13.n_21-vs-ZNF543-201.alignment counts-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF543-201/Hughes_GR_models_ZNF543_counts-pos.pattern_1.n_32-vs-ZNF543-201.alignment counts-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF543-201/Hughes_GR_models_ZNF543_counts-pos.pattern_2.n_30-vs-ZNF543-201.alignment counts-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF543-201/Hughes_GR_models_ZNF543_counts-pos.pattern_3.n_28-vs-ZNF543-201.alignment counts-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF543-201/Hughes_GR_models_ZNF543_counts-pos.pattern_4.n_26-vs-ZNF543-201.alignment counts-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF543-201/Hughes_GR_models_ZNF543_counts-pos.pattern_5.n_26-vs-ZNF543-201.alignment counts-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF543-201/Hughes_GR_models_ZNF543_counts-pos.pattern_6.n_25-vs-ZNF543-201.alignment counts-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF543-201/Hughes_GR_models_ZNF543_counts-pos.pattern_7.n_25-vs-ZNF543-201.alignment counts-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF543-201/Hughes_GR_models_ZNF543_counts-pos.pattern_8.n_24-vs-ZNF543-201.alignment counts-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF543-201/Hughes_GR_models_ZNF543_counts-pos.pattern_9.n_23-vs-ZNF543-201.alignment counts-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF543-201/pos_patterns.ENCSR584DEL_ChIP_ZNF543_HepG2_ENCSR077CRE_counts_pattern_0.n_1870-vs-ZNF543-201.alignment counts-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF543-201/pos_patterns.ENCSR584DEL_ChIP_ZNF543_HepG2_ENCSR077CRE_counts_pattern_10.n_333-vs-ZNF543-201.alignment counts-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF543-201/pos_patterns.ENCSR584DEL_ChIP_ZNF543_HepG2_ENCSR077CRE_counts_pattern_11.n_288-vs-ZNF543-201.alignment counts-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF543-201/pos_patterns.ENCSR584DEL_ChIP_ZNF543_HepG2_ENCSR077CRE_counts_pattern_12.n_271-vs-ZNF543-201.alignment counts-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF543-201/pos_patterns.ENCSR584DEL_ChIP_ZNF543_HepG2_ENCSR077CRE_counts_pattern_13.n_256-vs-ZNF543-201.alignment counts-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF543-201/pos_patterns.ENCSR584DEL_ChIP_ZNF543_HepG2_ENCSR077CRE_counts_pattern_14.n_251-vs-ZNF543-201.alignment counts-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF543-201/pos_patterns.ENCSR584DEL_ChIP_ZNF543_HepG2_ENCSR077CRE_counts_pattern_15.n_243-vs-ZNF543-201.alignment counts-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF543-201/pos_patterns.ENCSR584DEL_ChIP_ZNF543_HepG2_ENCSR077CRE_counts_pattern_16.n_235-vs-ZNF543-201.alignment counts-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF543-201/pos_patterns.ENCSR584DEL_ChIP_ZNF543_HepG2_ENCSR077CRE_counts_pattern_17.n_209-vs-ZNF543-201.alignment counts-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF543-201/pos_patterns.ENCSR584DEL_ChIP_ZNF543_HepG2_ENCSR077CRE_counts_pattern_18.n_201-vs-ZNF543-201.alignment counts-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF543-201/pos_patterns.ENCSR584DEL_ChIP_ZNF543_HepG2_ENCSR077CRE_counts_pattern_19.n_201-vs-ZNF543-201.alignment counts-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF543-201/pos_patterns.ENCSR584DEL_ChIP_ZNF543_HepG2_ENCSR077CRE_counts_pattern_1.n_1693-vs-ZNF543-201.alignment counts-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF543-201/pos_patterns.ENCSR584DEL_ChIP_ZNF543_HepG2_ENCSR077CRE_counts_pattern_20.n_181-vs-ZNF543-201.alignment counts-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF543-201/pos_patterns.ENCSR584DEL_ChIP_ZNF543_HepG2_ENCSR077CRE_counts_pattern_21.n_124-vs-ZNF543-201.alignment counts-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF543-201/pos_patterns.ENCSR584DEL_ChIP_ZNF543_HepG2_ENCSR077CRE_counts_pattern_22.n_120-vs-ZNF543-201.alignment counts-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF543-201/pos_patterns.ENCSR584DEL_ChIP_ZNF543_HepG2_ENCSR077CRE_counts_pattern_23.n_90-vs-ZNF543-201.alignment counts-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF543-201/pos_patterns.ENCSR584DEL_ChIP_ZNF543_HepG2_ENCSR077CRE_counts_pattern_24.n_82-vs-ZNF543-201.alignment counts-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF543-201/pos_patterns.ENCSR584DEL_ChIP_ZNF543_HepG2_ENCSR077CRE_counts_pattern_25.n_32-vs-ZNF543-201.alignment counts-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF543-201/pos_patterns.ENCSR584DEL_ChIP_ZNF543_HepG2_ENCSR077CRE_counts_pattern_2.n_1591-vs-ZNF543-201.alignment counts-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF543-201/pos_patterns.ENCSR584DEL_ChIP_ZNF543_HepG2_ENCSR077CRE_counts_pattern_3.n_1303-vs-ZNF543-201.alignment counts-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF543-201/pos_patterns.ENCSR584DEL_ChIP_ZNF543_HepG2_ENCSR077CRE_counts_pattern_4.n_985-vs-ZNF543-201.alignment counts-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF543-201/pos_patterns.ENCSR584DEL_ChIP_ZNF543_HepG2_ENCSR077CRE_counts_pattern_5.n_906-vs-ZNF543-201.alignment counts-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF543-201/pos_patterns.ENCSR584DEL_ChIP_ZNF543_HepG2_ENCSR077CRE_counts_pattern_6.n_514-vs-ZNF543-201.alignment counts-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF543-201/pos_patterns.ENCSR584DEL_ChIP_ZNF543_HepG2_ENCSR077CRE_counts_pattern_7.n_398-vs-ZNF543-201.alignment counts-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF543-201/pos_patterns.ENCSR584DEL_ChIP_ZNF543_HepG2_ENCSR077CRE_counts_pattern_8.n_381-vs-ZNF543-201.alignment counts-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF543-201/pos_patterns.ENCSR584DEL_ChIP_ZNF543_HepG2_ENCSR077CRE_counts_pattern_9.n_350-vs-ZNF543-201.alignment counts-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF544-201/pos_patterns.ENCSR167XFW_ChIP_ZNF544_HEK293_ENCSR503MUG_counts_pattern_0.n_633-vs-ZNF544-201.alignment counts-znf_b1h_alignment/ZNF544-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF544-201/pos_patterns.ENCSR167XFW_ChIP_ZNF544_HEK293_ENCSR503MUG_counts_pattern_1.n_162-vs-ZNF544-201.alignment counts-znf_b1h_alignment/ZNF544-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF544-201/pos_patterns.ENCSR167XFW_ChIP_ZNF544_HEK293_ENCSR503MUG_counts_pattern_2.n_21-vs-ZNF544-201.alignment counts-znf_b1h_alignment/ZNF544-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF546-201/pos_patterns.ENCSR782WWY_ChIP_ZNF546_HepG2_ENCSR420WEB_counts_pattern_0.n_1841-vs-ZNF546-201.alignment counts-znf_b1h_alignment/ZNF546-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF546-201/pos_patterns.ENCSR782WWY_ChIP_ZNF546_HepG2_ENCSR420WEB_counts_pattern_10.n_66-vs-ZNF546-201.alignment counts-znf_b1h_alignment/ZNF546-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF546-201/pos_patterns.ENCSR782WWY_ChIP_ZNF546_HepG2_ENCSR420WEB_counts_pattern_11.n_53-vs-ZNF546-201.alignment counts-znf_b1h_alignment/ZNF546-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF546-201/pos_patterns.ENCSR782WWY_ChIP_ZNF546_HepG2_ENCSR420WEB_counts_pattern_1.n_998-vs-ZNF546-201.alignment counts-znf_b1h_alignment/ZNF546-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF546-201/pos_patterns.ENCSR782WWY_ChIP_ZNF546_HepG2_ENCSR420WEB_counts_pattern_2.n_888-vs-ZNF546-201.alignment counts-znf_b1h_alignment/ZNF546-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF546-201/pos_patterns.ENCSR782WWY_ChIP_ZNF546_HepG2_ENCSR420WEB_counts_pattern_3.n_622-vs-ZNF546-201.alignment counts-znf_b1h_alignment/ZNF546-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF546-201/pos_patterns.ENCSR782WWY_ChIP_ZNF546_HepG2_ENCSR420WEB_counts_pattern_4.n_424-vs-ZNF546-201.alignment counts-znf_b1h_alignment/ZNF546-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF546-201/pos_patterns.ENCSR782WWY_ChIP_ZNF546_HepG2_ENCSR420WEB_counts_pattern_5.n_222-vs-ZNF546-201.alignment counts-znf_b1h_alignment/ZNF546-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF546-201/pos_patterns.ENCSR782WWY_ChIP_ZNF546_HepG2_ENCSR420WEB_counts_pattern_6.n_146-vs-ZNF546-201.alignment counts-znf_b1h_alignment/ZNF546-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF546-201/pos_patterns.ENCSR782WWY_ChIP_ZNF546_HepG2_ENCSR420WEB_counts_pattern_7.n_117-vs-ZNF546-201.alignment counts-znf_b1h_alignment/ZNF546-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF546-201/pos_patterns.ENCSR782WWY_ChIP_ZNF546_HepG2_ENCSR420WEB_counts_pattern_8.n_109-vs-ZNF546-201.alignment counts-znf_b1h_alignment/ZNF546-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF546-201/pos_patterns.ENCSR782WWY_ChIP_ZNF546_HepG2_ENCSR420WEB_counts_pattern_9.n_74-vs-ZNF546-201.alignment counts-znf_b1h_alignment/ZNF546-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/ChipExo_models_ZNF547_counts-pos.pattern_0.n_1860-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/ChipExo_models_ZNF547_counts-pos.pattern_1.n_995-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/Hughes_GR_models_ZNF547_counts-pos.pattern_0.n_1181-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/neg_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_0.n_208-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/neg_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_10.n_43-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/neg_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_11.n_40-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/neg_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_12.n_28-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/neg_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_13.n_27-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/neg_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_14.n_27-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/neg_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_1.n_103-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/neg_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_2.n_83-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/neg_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_3.n_66-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/neg_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_4.n_61-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/neg_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_5.n_54-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/neg_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_6.n_52-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/neg_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_7.n_47-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/neg_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_8.n_44-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/neg_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_9.n_44-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR909TSW_ChIP_ZNF547_HEK293_ENCSR730YDI_counts_pattern_0.n_1104-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR909TSW_ChIP_ZNF547_HEK293_ENCSR730YDI_counts_pattern_1.n_1000-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR909TSW_ChIP_ZNF547_HEK293_ENCSR730YDI_counts_pattern_2.n_460-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR909TSW_ChIP_ZNF547_HEK293_ENCSR730YDI_counts_pattern_3.n_159-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR909TSW_ChIP_ZNF547_HEK293_ENCSR730YDI_counts_pattern_4.n_130-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR909TSW_ChIP_ZNF547_HEK293_ENCSR730YDI_counts_pattern_5.n_76-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR909TSW_ChIP_ZNF547_HEK293_ENCSR730YDI_counts_pattern_6.n_74-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR909TSW_ChIP_ZNF547_HEK293_ENCSR730YDI_counts_pattern_7.n_48-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_0.n_2516-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_10.n_400-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_11.n_390-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_12.n_348-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_13.n_298-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_14.n_263-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_15.n_251-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_16.n_244-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_17.n_237-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_18.n_226-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_19.n_222-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_1.n_1954-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_20.n_221-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_21.n_215-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_22.n_193-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_23.n_192-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_24.n_179-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_25.n_73-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_26.n_67-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_27.n_56-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_28.n_42-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_29.n_35-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_2.n_1509-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_3.n_1255-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_4.n_797-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_5.n_763-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_6.n_623-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_7.n_433-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_8.n_425-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_counts_pattern_9.n_419-vs-ZNF547-201.alignment counts-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF548-201/ChipExo_models_ZNF548_counts-pos.pattern_0.n_179-vs-ZNF548-201.alignment counts-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF548-201/ChipExo_models_ZNF548_counts-pos.pattern_1.n_133-vs-ZNF548-201.alignment counts-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF548-201/ChipExo_models_ZNF548_counts-pos.pattern_2.n_26-vs-ZNF548-201.alignment counts-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF548-201/pos_patterns.ENCSR756UNW_ChIP_ZNF548_HepG2_ENCSR055QWT_counts_pattern_0.n_2248-vs-ZNF548-201.alignment counts-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF548-201/pos_patterns.ENCSR756UNW_ChIP_ZNF548_HepG2_ENCSR055QWT_counts_pattern_10.n_226-vs-ZNF548-201.alignment counts-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF548-201/pos_patterns.ENCSR756UNW_ChIP_ZNF548_HepG2_ENCSR055QWT_counts_pattern_11.n_218-vs-ZNF548-201.alignment counts-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF548-201/pos_patterns.ENCSR756UNW_ChIP_ZNF548_HepG2_ENCSR055QWT_counts_pattern_12.n_189-vs-ZNF548-201.alignment counts-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF548-201/pos_patterns.ENCSR756UNW_ChIP_ZNF548_HepG2_ENCSR055QWT_counts_pattern_13.n_171-vs-ZNF548-201.alignment counts-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF548-201/pos_patterns.ENCSR756UNW_ChIP_ZNF548_HepG2_ENCSR055QWT_counts_pattern_14.n_170-vs-ZNF548-201.alignment counts-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF548-201/pos_patterns.ENCSR756UNW_ChIP_ZNF548_HepG2_ENCSR055QWT_counts_pattern_15.n_125-vs-ZNF548-201.alignment counts-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF548-201/pos_patterns.ENCSR756UNW_ChIP_ZNF548_HepG2_ENCSR055QWT_counts_pattern_16.n_113-vs-ZNF548-201.alignment counts-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF548-201/pos_patterns.ENCSR756UNW_ChIP_ZNF548_HepG2_ENCSR055QWT_counts_pattern_17.n_95-vs-ZNF548-201.alignment counts-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF548-201/pos_patterns.ENCSR756UNW_ChIP_ZNF548_HepG2_ENCSR055QWT_counts_pattern_18.n_60-vs-ZNF548-201.alignment counts-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF548-201/pos_patterns.ENCSR756UNW_ChIP_ZNF548_HepG2_ENCSR055QWT_counts_pattern_19.n_52-vs-ZNF548-201.alignment counts-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF548-201/pos_patterns.ENCSR756UNW_ChIP_ZNF548_HepG2_ENCSR055QWT_counts_pattern_1.n_1698-vs-ZNF548-201.alignment counts-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF548-201/pos_patterns.ENCSR756UNW_ChIP_ZNF548_HepG2_ENCSR055QWT_counts_pattern_20.n_51-vs-ZNF548-201.alignment counts-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF548-201/pos_patterns.ENCSR756UNW_ChIP_ZNF548_HepG2_ENCSR055QWT_counts_pattern_21.n_46-vs-ZNF548-201.alignment counts-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF548-201/pos_patterns.ENCSR756UNW_ChIP_ZNF548_HepG2_ENCSR055QWT_counts_pattern_2.n_1508-vs-ZNF548-201.alignment counts-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF548-201/pos_patterns.ENCSR756UNW_ChIP_ZNF548_HepG2_ENCSR055QWT_counts_pattern_3.n_940-vs-ZNF548-201.alignment counts-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF548-201/pos_patterns.ENCSR756UNW_ChIP_ZNF548_HepG2_ENCSR055QWT_counts_pattern_4.n_842-vs-ZNF548-201.alignment counts-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF548-201/pos_patterns.ENCSR756UNW_ChIP_ZNF548_HepG2_ENCSR055QWT_counts_pattern_5.n_823-vs-ZNF548-201.alignment counts-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF548-201/pos_patterns.ENCSR756UNW_ChIP_ZNF548_HepG2_ENCSR055QWT_counts_pattern_6.n_652-vs-ZNF548-201.alignment counts-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF548-201/pos_patterns.ENCSR756UNW_ChIP_ZNF548_HepG2_ENCSR055QWT_counts_pattern_7.n_297-vs-ZNF548-201.alignment counts-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF548-201/pos_patterns.ENCSR756UNW_ChIP_ZNF548_HepG2_ENCSR055QWT_counts_pattern_8.n_254-vs-ZNF548-201.alignment counts-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF548-201/pos_patterns.ENCSR756UNW_ChIP_ZNF548_HepG2_ENCSR055QWT_counts_pattern_9.n_227-vs-ZNF548-201.alignment counts-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF548-201/pos_patterns.ENCSR892ZTO_ChIP_ZNF548_HEK293_ENCSR293AOG_counts_pattern_0.n_1070-vs-ZNF548-201.alignment counts-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF548-201/pos_patterns.ENCSR892ZTO_ChIP_ZNF548_HEK293_ENCSR293AOG_counts_pattern_1.n_1020-vs-ZNF548-201.alignment counts-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF548-201/pos_patterns.ENCSR892ZTO_ChIP_ZNF548_HEK293_ENCSR293AOG_counts_pattern_2.n_124-vs-ZNF548-201.alignment counts-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF548-201/pos_patterns.ENCSR892ZTO_ChIP_ZNF548_HEK293_ENCSR293AOG_counts_pattern_3.n_106-vs-ZNF548-201.alignment counts-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF548-201/pos_patterns.ENCSR892ZTO_ChIP_ZNF548_HEK293_ENCSR293AOG_counts_pattern_4.n_105-vs-ZNF548-201.alignment counts-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF548-201/pos_patterns.ENCSR892ZTO_ChIP_ZNF548_HEK293_ENCSR293AOG_counts_pattern_5.n_87-vs-ZNF548-201.alignment counts-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF548-201/pos_patterns.ENCSR892ZTO_ChIP_ZNF548_HEK293_ENCSR293AOG_counts_pattern_6.n_29-vs-ZNF548-201.alignment counts-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF549-201/ChipExo_models_ZNF549_counts-pos.pattern_0.n_1032-vs-ZNF549-201.alignment counts-znf_b1h_alignment/ZNF549-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF549-201/Hughes_GR_models_ZNF549_counts-pos.pattern_0.n_3047-vs-ZNF549-201.alignment counts-znf_b1h_alignment/ZNF549-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF549-201/Hughes_GR_models_ZNF549_counts-pos.pattern_1.n_98-vs-ZNF549-201.alignment counts-znf_b1h_alignment/ZNF549-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF549-201/Hughes_GR_models_ZNF549_counts-pos.pattern_2.n_74-vs-ZNF549-201.alignment counts-znf_b1h_alignment/ZNF549-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF549-201/Hughes_GR_models_ZNF549_counts-pos.pattern_3.n_63-vs-ZNF549-201.alignment counts-znf_b1h_alignment/ZNF549-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF549-201/Hughes_GR_models_ZNF549_counts-pos.pattern_4.n_35-vs-ZNF549-201.alignment counts-znf_b1h_alignment/ZNF549-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF549-201/Hughes_GR_models_ZNF549_counts-pos.pattern_5.n_24-vs-ZNF549-201.alignment counts-znf_b1h_alignment/ZNF549-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF549-201/pos_patterns.ENCSR185QFX_ChIP_ZNF549_HEK293_ENCSR989FNU_counts_pattern_0.n_2056-vs-ZNF549-201.alignment counts-znf_b1h_alignment/ZNF549-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF549-201/pos_patterns.ENCSR185QFX_ChIP_ZNF549_HEK293_ENCSR989FNU_counts_pattern_1.n_515-vs-ZNF549-201.alignment counts-znf_b1h_alignment/ZNF549-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF549-201/pos_patterns.ENCSR185QFX_ChIP_ZNF549_HEK293_ENCSR989FNU_counts_pattern_2.n_172-vs-ZNF549-201.alignment counts-znf_b1h_alignment/ZNF549-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF549-201/pos_patterns.ENCSR185QFX_ChIP_ZNF549_HEK293_ENCSR989FNU_counts_pattern_3.n_81-vs-ZNF549-201.alignment counts-znf_b1h_alignment/ZNF549-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF549-201/pos_patterns.ENCSR185QFX_ChIP_ZNF549_HEK293_ENCSR989FNU_counts_pattern_4.n_46-vs-ZNF549-201.alignment counts-znf_b1h_alignment/ZNF549-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF549-201/pos_patterns.ENCSR185QFX_ChIP_ZNF549_HEK293_ENCSR989FNU_counts_pattern_5.n_32-vs-ZNF549-201.alignment counts-znf_b1h_alignment/ZNF549-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF549-201/pos_patterns.ENCSR185QFX_ChIP_ZNF549_HEK293_ENCSR989FNU_counts_pattern_6.n_31-vs-ZNF549-201.alignment counts-znf_b1h_alignment/ZNF549-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF549-201/pos_patterns.ENCSR545ACM_ChIP_ZNF549_HepG2_ENCSR747QXK_counts_pattern_0.n_881-vs-ZNF549-201.alignment counts-znf_b1h_alignment/ZNF549-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF549-201/pos_patterns.ENCSR545ACM_ChIP_ZNF549_HepG2_ENCSR747QXK_counts_pattern_1.n_357-vs-ZNF549-201.alignment counts-znf_b1h_alignment/ZNF549-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF549-201/pos_patterns.ENCSR545ACM_ChIP_ZNF549_HepG2_ENCSR747QXK_counts_pattern_2.n_116-vs-ZNF549-201.alignment counts-znf_b1h_alignment/ZNF549-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF549-201/pos_patterns.ENCSR545ACM_ChIP_ZNF549_HepG2_ENCSR747QXK_counts_pattern_3.n_93-vs-ZNF549-201.alignment counts-znf_b1h_alignment/ZNF549-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF549-201/pos_patterns.ENCSR545ACM_ChIP_ZNF549_HepG2_ENCSR747QXK_counts_pattern_4.n_73-vs-ZNF549-201.alignment counts-znf_b1h_alignment/ZNF549-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF549-201/pos_patterns.ENCSR545ACM_ChIP_ZNF549_HepG2_ENCSR747QXK_counts_pattern_5.n_57-vs-ZNF549-201.alignment counts-znf_b1h_alignment/ZNF549-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF549-201/pos_patterns.ENCSR545ACM_ChIP_ZNF549_HepG2_ENCSR747QXK_counts_pattern_6.n_43-vs-ZNF549-201.alignment counts-znf_b1h_alignment/ZNF549-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF550-201/ChipExo_models_ZNF550_counts-pos.pattern_0.n_270-vs-ZNF550-201.alignment counts-znf_b1h_alignment/ZNF550-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF550-201/ChipExo_models_ZNF550_counts-pos.pattern_1.n_20-vs-ZNF550-201.alignment counts-znf_b1h_alignment/ZNF550-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF550-201/neg_patterns.ENCSR198BHH_ChIP_ZNF550_HepG2_ENCSR079FFV_counts_pattern_0.n_370-vs-ZNF550-201.alignment counts-znf_b1h_alignment/ZNF550-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF550-201/pos_patterns.ENCSR198BHH_ChIP_ZNF550_HepG2_ENCSR079FFV_counts_pattern_0.n_1178-vs-ZNF550-201.alignment counts-znf_b1h_alignment/ZNF550-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF550-201/pos_patterns.ENCSR198BHH_ChIP_ZNF550_HepG2_ENCSR079FFV_counts_pattern_1.n_1090-vs-ZNF550-201.alignment counts-znf_b1h_alignment/ZNF550-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF550-201/pos_patterns.ENCSR198BHH_ChIP_ZNF550_HepG2_ENCSR079FFV_counts_pattern_2.n_984-vs-ZNF550-201.alignment counts-znf_b1h_alignment/ZNF550-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF550-201/pos_patterns.ENCSR198BHH_ChIP_ZNF550_HepG2_ENCSR079FFV_counts_pattern_3.n_686-vs-ZNF550-201.alignment counts-znf_b1h_alignment/ZNF550-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF550-201/pos_patterns.ENCSR198BHH_ChIP_ZNF550_HepG2_ENCSR079FFV_counts_pattern_4.n_344-vs-ZNF550-201.alignment counts-znf_b1h_alignment/ZNF550-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF550-201/pos_patterns.ENCSR198BHH_ChIP_ZNF550_HepG2_ENCSR079FFV_counts_pattern_5.n_222-vs-ZNF550-201.alignment counts-znf_b1h_alignment/ZNF550-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF550-201/pos_patterns.ENCSR198BHH_ChIP_ZNF550_HepG2_ENCSR079FFV_counts_pattern_6.n_222-vs-ZNF550-201.alignment counts-znf_b1h_alignment/ZNF550-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF550-201/pos_patterns.ENCSR198BHH_ChIP_ZNF550_HepG2_ENCSR079FFV_counts_pattern_7.n_49-vs-ZNF550-201.alignment counts-znf_b1h_alignment/ZNF550-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF551-201/neg_patterns.ENCSR451UQX_ChIP_ZNF551_K562_ENCSR958OBP_counts_pattern_0.n_255-vs-ZNF551-201.alignment counts-znf_b1h_alignment/ZNF551-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF551-201/neg_patterns.ENCSR451UQX_ChIP_ZNF551_K562_ENCSR958OBP_counts_pattern_1.n_78-vs-ZNF551-201.alignment counts-znf_b1h_alignment/ZNF551-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF551-201/neg_patterns.ENCSR451UQX_ChIP_ZNF551_K562_ENCSR958OBP_counts_pattern_2.n_34-vs-ZNF551-201.alignment counts-znf_b1h_alignment/ZNF551-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF551-201/neg_patterns.ENCSR451UQX_ChIP_ZNF551_K562_ENCSR958OBP_counts_pattern_3.n_34-vs-ZNF551-201.alignment counts-znf_b1h_alignment/ZNF551-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF551-201/neg_patterns.ENCSR451UQX_ChIP_ZNF551_K562_ENCSR958OBP_counts_pattern_4.n_34-vs-ZNF551-201.alignment counts-znf_b1h_alignment/ZNF551-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF551-201/neg_patterns.ENCSR451UQX_ChIP_ZNF551_K562_ENCSR958OBP_counts_pattern_5.n_33-vs-ZNF551-201.alignment counts-znf_b1h_alignment/ZNF551-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF551-201/neg_patterns.ENCSR451UQX_ChIP_ZNF551_K562_ENCSR958OBP_counts_pattern_6.n_30-vs-ZNF551-201.alignment counts-znf_b1h_alignment/ZNF551-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF551-201/neg_patterns.ENCSR451UQX_ChIP_ZNF551_K562_ENCSR958OBP_counts_pattern_7.n_29-vs-ZNF551-201.alignment counts-znf_b1h_alignment/ZNF551-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF551-201/neg_patterns.ENCSR451UQX_ChIP_ZNF551_K562_ENCSR958OBP_counts_pattern_8.n_27-vs-ZNF551-201.alignment counts-znf_b1h_alignment/ZNF551-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF551-201/neg_patterns.ENCSR451UQX_ChIP_ZNF551_K562_ENCSR958OBP_counts_pattern_9.n_21-vs-ZNF551-201.alignment counts-znf_b1h_alignment/ZNF551-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF551-201/pos_patterns.ENCSR451UQX_ChIP_ZNF551_K562_ENCSR958OBP_counts_pattern_0.n_187-vs-ZNF551-201.alignment counts-znf_b1h_alignment/ZNF551-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF551-201/pos_patterns.ENCSR451UQX_ChIP_ZNF551_K562_ENCSR958OBP_counts_pattern_1.n_172-vs-ZNF551-201.alignment counts-znf_b1h_alignment/ZNF551-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF551-201/pos_patterns.ENCSR451UQX_ChIP_ZNF551_K562_ENCSR958OBP_counts_pattern_2.n_108-vs-ZNF551-201.alignment counts-znf_b1h_alignment/ZNF551-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF551-201/pos_patterns.ENCSR451UQX_ChIP_ZNF551_K562_ENCSR958OBP_counts_pattern_3.n_82-vs-ZNF551-201.alignment counts-znf_b1h_alignment/ZNF551-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF551-201/pos_patterns.ENCSR451UQX_ChIP_ZNF551_K562_ENCSR958OBP_counts_pattern_4.n_75-vs-ZNF551-201.alignment counts-znf_b1h_alignment/ZNF551-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF551-201/pos_patterns.ENCSR451UQX_ChIP_ZNF551_K562_ENCSR958OBP_counts_pattern_5.n_35-vs-ZNF551-201.alignment counts-znf_b1h_alignment/ZNF551-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF551-201/pos_patterns.ENCSR451UQX_ChIP_ZNF551_K562_ENCSR958OBP_counts_pattern_6.n_35-vs-ZNF551-201.alignment counts-znf_b1h_alignment/ZNF551-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF551-201/pos_patterns.ENCSR451UQX_ChIP_ZNF551_K562_ENCSR958OBP_counts_pattern_7.n_21-vs-ZNF551-201.alignment counts-znf_b1h_alignment/ZNF551-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF552-201/ChipExo_models_ZNF552_counts-pos.pattern_0.n_154-vs-ZNF552-201.alignment counts-znf_b1h_alignment/ZNF552-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF552-201/ChipExo_models_ZNF552_counts-pos.pattern_1.n_24-vs-ZNF552-201.alignment counts-znf_b1h_alignment/ZNF552-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF552-201/pos_patterns.ENCSR448RAP_ChIP_ZNF552_HepG2_ENCSR388KPL_counts_pattern_0.n_1981-vs-ZNF552-201.alignment counts-znf_b1h_alignment/ZNF552-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF552-201/pos_patterns.ENCSR448RAP_ChIP_ZNF552_HepG2_ENCSR388KPL_counts_pattern_10.n_29-vs-ZNF552-201.alignment counts-znf_b1h_alignment/ZNF552-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF552-201/pos_patterns.ENCSR448RAP_ChIP_ZNF552_HepG2_ENCSR388KPL_counts_pattern_1.n_1847-vs-ZNF552-201.alignment counts-znf_b1h_alignment/ZNF552-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF552-201/pos_patterns.ENCSR448RAP_ChIP_ZNF552_HepG2_ENCSR388KPL_counts_pattern_2.n_1747-vs-ZNF552-201.alignment counts-znf_b1h_alignment/ZNF552-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF552-201/pos_patterns.ENCSR448RAP_ChIP_ZNF552_HepG2_ENCSR388KPL_counts_pattern_3.n_380-vs-ZNF552-201.alignment counts-znf_b1h_alignment/ZNF552-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF552-201/pos_patterns.ENCSR448RAP_ChIP_ZNF552_HepG2_ENCSR388KPL_counts_pattern_4.n_376-vs-ZNF552-201.alignment counts-znf_b1h_alignment/ZNF552-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF552-201/pos_patterns.ENCSR448RAP_ChIP_ZNF552_HepG2_ENCSR388KPL_counts_pattern_5.n_243-vs-ZNF552-201.alignment counts-znf_b1h_alignment/ZNF552-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF552-201/pos_patterns.ENCSR448RAP_ChIP_ZNF552_HepG2_ENCSR388KPL_counts_pattern_6.n_210-vs-ZNF552-201.alignment counts-znf_b1h_alignment/ZNF552-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF552-201/pos_patterns.ENCSR448RAP_ChIP_ZNF552_HepG2_ENCSR388KPL_counts_pattern_7.n_188-vs-ZNF552-201.alignment counts-znf_b1h_alignment/ZNF552-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF552-201/pos_patterns.ENCSR448RAP_ChIP_ZNF552_HepG2_ENCSR388KPL_counts_pattern_8.n_158-vs-ZNF552-201.alignment counts-znf_b1h_alignment/ZNF552-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF552-201/pos_patterns.ENCSR448RAP_ChIP_ZNF552_HepG2_ENCSR388KPL_counts_pattern_9.n_111-vs-ZNF552-201.alignment counts-znf_b1h_alignment/ZNF552-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF554-201/Hughes_GR_models_ZNF554_counts-pos.pattern_0.n_2737-vs-ZNF554-201.alignment counts-znf_b1h_alignment/ZNF554-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF554-201/Hughes_GR_models_ZNF554_counts-pos.pattern_1.n_2131-vs-ZNF554-201.alignment counts-znf_b1h_alignment/ZNF554-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF554-201/Hughes_GR_models_ZNF554_counts-pos.pattern_2.n_1998-vs-ZNF554-201.alignment counts-znf_b1h_alignment/ZNF554-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF554-201/Hughes_GR_models_ZNF554_counts-pos.pattern_3.n_1517-vs-ZNF554-201.alignment counts-znf_b1h_alignment/ZNF554-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF554-201/Hughes_GR_models_ZNF554_counts-pos.pattern_4.n_1010-vs-ZNF554-201.alignment counts-znf_b1h_alignment/ZNF554-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF554-201/Hughes_GR_models_ZNF554_counts-pos.pattern_5.n_662-vs-ZNF554-201.alignment counts-znf_b1h_alignment/ZNF554-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF555-201/ChipExo_models_ZNF555_counts-pos.pattern_0.n_524-vs-ZNF555-201.alignment counts-znf_b1h_alignment/ZNF555-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF555-201/ChipExo_models_ZNF555_counts-pos.pattern_1.n_88-vs-ZNF555-201.alignment counts-znf_b1h_alignment/ZNF555-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF555-201/ChipExo_models_ZNF555_counts-pos.pattern_2.n_33-vs-ZNF555-201.alignment counts-znf_b1h_alignment/ZNF555-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF555-201/ChipExo_models_ZNF555_counts-pos.pattern_3.n_22-vs-ZNF555-201.alignment counts-znf_b1h_alignment/ZNF555-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF555-201/pos_patterns.ENCSR767XSF_ChIP_ZNF555_HEK293_ENCSR317JIU_counts_pattern_0.n_6374-vs-ZNF555-201.alignment counts-znf_b1h_alignment/ZNF555-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF555-201/pos_patterns.ENCSR767XSF_ChIP_ZNF555_HEK293_ENCSR317JIU_counts_pattern_1.n_90-vs-ZNF555-201.alignment counts-znf_b1h_alignment/ZNF555-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF556-201/neg_patterns.ENCSR644WQN_ChIP_ZNF556_HepG2_ENCSR879SLJ_counts_pattern_0.n_48-vs-ZNF556-201.alignment counts-znf_b1h_alignment/ZNF556-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF556-201/neg_patterns.ENCSR644WQN_ChIP_ZNF556_HepG2_ENCSR879SLJ_counts_pattern_1.n_47-vs-ZNF556-201.alignment counts-znf_b1h_alignment/ZNF556-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF556-201/neg_patterns.ENCSR644WQN_ChIP_ZNF556_HepG2_ENCSR879SLJ_counts_pattern_2.n_41-vs-ZNF556-201.alignment counts-znf_b1h_alignment/ZNF556-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF556-201/neg_patterns.ENCSR644WQN_ChIP_ZNF556_HepG2_ENCSR879SLJ_counts_pattern_3.n_23-vs-ZNF556-201.alignment counts-znf_b1h_alignment/ZNF556-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF556-201/pos_patterns.ENCSR644WQN_ChIP_ZNF556_HepG2_ENCSR879SLJ_counts_pattern_0.n_4054-vs-ZNF556-201.alignment counts-znf_b1h_alignment/ZNF556-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF556-201/pos_patterns.ENCSR644WQN_ChIP_ZNF556_HepG2_ENCSR879SLJ_counts_pattern_10.n_241-vs-ZNF556-201.alignment counts-znf_b1h_alignment/ZNF556-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF556-201/pos_patterns.ENCSR644WQN_ChIP_ZNF556_HepG2_ENCSR879SLJ_counts_pattern_11.n_234-vs-ZNF556-201.alignment counts-znf_b1h_alignment/ZNF556-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF556-201/pos_patterns.ENCSR644WQN_ChIP_ZNF556_HepG2_ENCSR879SLJ_counts_pattern_12.n_233-vs-ZNF556-201.alignment counts-znf_b1h_alignment/ZNF556-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF556-201/pos_patterns.ENCSR644WQN_ChIP_ZNF556_HepG2_ENCSR879SLJ_counts_pattern_13.n_213-vs-ZNF556-201.alignment counts-znf_b1h_alignment/ZNF556-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF556-201/pos_patterns.ENCSR644WQN_ChIP_ZNF556_HepG2_ENCSR879SLJ_counts_pattern_14.n_144-vs-ZNF556-201.alignment counts-znf_b1h_alignment/ZNF556-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF556-201/pos_patterns.ENCSR644WQN_ChIP_ZNF556_HepG2_ENCSR879SLJ_counts_pattern_15.n_108-vs-ZNF556-201.alignment counts-znf_b1h_alignment/ZNF556-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF556-201/pos_patterns.ENCSR644WQN_ChIP_ZNF556_HepG2_ENCSR879SLJ_counts_pattern_16.n_38-vs-ZNF556-201.alignment counts-znf_b1h_alignment/ZNF556-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF556-201/pos_patterns.ENCSR644WQN_ChIP_ZNF556_HepG2_ENCSR879SLJ_counts_pattern_1.n_2093-vs-ZNF556-201.alignment counts-znf_b1h_alignment/ZNF556-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF556-201/pos_patterns.ENCSR644WQN_ChIP_ZNF556_HepG2_ENCSR879SLJ_counts_pattern_2.n_1586-vs-ZNF556-201.alignment counts-znf_b1h_alignment/ZNF556-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF556-201/pos_patterns.ENCSR644WQN_ChIP_ZNF556_HepG2_ENCSR879SLJ_counts_pattern_3.n_1544-vs-ZNF556-201.alignment counts-znf_b1h_alignment/ZNF556-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF556-201/pos_patterns.ENCSR644WQN_ChIP_ZNF556_HepG2_ENCSR879SLJ_counts_pattern_4.n_975-vs-ZNF556-201.alignment counts-znf_b1h_alignment/ZNF556-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF556-201/pos_patterns.ENCSR644WQN_ChIP_ZNF556_HepG2_ENCSR879SLJ_counts_pattern_5.n_784-vs-ZNF556-201.alignment counts-znf_b1h_alignment/ZNF556-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF556-201/pos_patterns.ENCSR644WQN_ChIP_ZNF556_HepG2_ENCSR879SLJ_counts_pattern_6.n_449-vs-ZNF556-201.alignment counts-znf_b1h_alignment/ZNF556-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF556-201/pos_patterns.ENCSR644WQN_ChIP_ZNF556_HepG2_ENCSR879SLJ_counts_pattern_7.n_392-vs-ZNF556-201.alignment counts-znf_b1h_alignment/ZNF556-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF556-201/pos_patterns.ENCSR644WQN_ChIP_ZNF556_HepG2_ENCSR879SLJ_counts_pattern_8.n_330-vs-ZNF556-201.alignment counts-znf_b1h_alignment/ZNF556-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF556-201/pos_patterns.ENCSR644WQN_ChIP_ZNF556_HepG2_ENCSR879SLJ_counts_pattern_9.n_278-vs-ZNF556-201.alignment counts-znf_b1h_alignment/ZNF556-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF557-201/ChipExo_models_ZNF557_counts-pos.pattern_0.n_189-vs-ZNF557-201.alignment counts-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF557-201/ChipExo_models_ZNF557_counts-pos.pattern_1.n_177-vs-ZNF557-201.alignment counts-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF557-201/ChipExo_models_ZNF557_counts-pos.pattern_2.n_164-vs-ZNF557-201.alignment counts-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF557-201/ChipExo_models_ZNF557_counts-pos.pattern_3.n_127-vs-ZNF557-201.alignment counts-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF557-201/ChipExo_models_ZNF557_counts-pos.pattern_4.n_114-vs-ZNF557-201.alignment counts-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF557-201/ChipExo_models_ZNF557_counts-pos.pattern_5.n_67-vs-ZNF557-201.alignment counts-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF557-201/pos_patterns.ENCSR325VYA_ChIP_ZNF557_HepG2_ENCSR011WOV_counts_pattern_0.n_1737-vs-ZNF557-201.alignment counts-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF557-201/pos_patterns.ENCSR325VYA_ChIP_ZNF557_HepG2_ENCSR011WOV_counts_pattern_10.n_159-vs-ZNF557-201.alignment counts-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF557-201/pos_patterns.ENCSR325VYA_ChIP_ZNF557_HepG2_ENCSR011WOV_counts_pattern_11.n_158-vs-ZNF557-201.alignment counts-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF557-201/pos_patterns.ENCSR325VYA_ChIP_ZNF557_HepG2_ENCSR011WOV_counts_pattern_12.n_146-vs-ZNF557-201.alignment counts-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF557-201/pos_patterns.ENCSR325VYA_ChIP_ZNF557_HepG2_ENCSR011WOV_counts_pattern_13.n_142-vs-ZNF557-201.alignment counts-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF557-201/pos_patterns.ENCSR325VYA_ChIP_ZNF557_HepG2_ENCSR011WOV_counts_pattern_14.n_139-vs-ZNF557-201.alignment counts-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF557-201/pos_patterns.ENCSR325VYA_ChIP_ZNF557_HepG2_ENCSR011WOV_counts_pattern_15.n_94-vs-ZNF557-201.alignment counts-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF557-201/pos_patterns.ENCSR325VYA_ChIP_ZNF557_HepG2_ENCSR011WOV_counts_pattern_16.n_87-vs-ZNF557-201.alignment counts-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF557-201/pos_patterns.ENCSR325VYA_ChIP_ZNF557_HepG2_ENCSR011WOV_counts_pattern_17.n_74-vs-ZNF557-201.alignment counts-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF557-201/pos_patterns.ENCSR325VYA_ChIP_ZNF557_HepG2_ENCSR011WOV_counts_pattern_18.n_73-vs-ZNF557-201.alignment counts-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF557-201/pos_patterns.ENCSR325VYA_ChIP_ZNF557_HepG2_ENCSR011WOV_counts_pattern_19.n_70-vs-ZNF557-201.alignment counts-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF557-201/pos_patterns.ENCSR325VYA_ChIP_ZNF557_HepG2_ENCSR011WOV_counts_pattern_1.n_994-vs-ZNF557-201.alignment counts-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF557-201/pos_patterns.ENCSR325VYA_ChIP_ZNF557_HepG2_ENCSR011WOV_counts_pattern_20.n_64-vs-ZNF557-201.alignment counts-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF557-201/pos_patterns.ENCSR325VYA_ChIP_ZNF557_HepG2_ENCSR011WOV_counts_pattern_21.n_54-vs-ZNF557-201.alignment counts-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF557-201/pos_patterns.ENCSR325VYA_ChIP_ZNF557_HepG2_ENCSR011WOV_counts_pattern_22.n_39-vs-ZNF557-201.alignment counts-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF557-201/pos_patterns.ENCSR325VYA_ChIP_ZNF557_HepG2_ENCSR011WOV_counts_pattern_23.n_29-vs-ZNF557-201.alignment counts-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF557-201/pos_patterns.ENCSR325VYA_ChIP_ZNF557_HepG2_ENCSR011WOV_counts_pattern_2.n_959-vs-ZNF557-201.alignment counts-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF557-201/pos_patterns.ENCSR325VYA_ChIP_ZNF557_HepG2_ENCSR011WOV_counts_pattern_3.n_755-vs-ZNF557-201.alignment counts-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF557-201/pos_patterns.ENCSR325VYA_ChIP_ZNF557_HepG2_ENCSR011WOV_counts_pattern_4.n_372-vs-ZNF557-201.alignment counts-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF557-201/pos_patterns.ENCSR325VYA_ChIP_ZNF557_HepG2_ENCSR011WOV_counts_pattern_5.n_259-vs-ZNF557-201.alignment counts-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF557-201/pos_patterns.ENCSR325VYA_ChIP_ZNF557_HepG2_ENCSR011WOV_counts_pattern_6.n_258-vs-ZNF557-201.alignment counts-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF557-201/pos_patterns.ENCSR325VYA_ChIP_ZNF557_HepG2_ENCSR011WOV_counts_pattern_7.n_244-vs-ZNF557-201.alignment counts-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF557-201/pos_patterns.ENCSR325VYA_ChIP_ZNF557_HepG2_ENCSR011WOV_counts_pattern_8.n_236-vs-ZNF557-201.alignment counts-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF557-201/pos_patterns.ENCSR325VYA_ChIP_ZNF557_HepG2_ENCSR011WOV_counts_pattern_9.n_211-vs-ZNF557-201.alignment counts-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF558-201/ChipExo_models_ZNF558_counts-neg.pattern_0.n_43-vs-ZNF558-201.alignment counts-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF558-201/ChipExo_models_ZNF558_counts-neg.pattern_1.n_21-vs-ZNF558-201.alignment counts-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF558-201/ChipExo_models_ZNF558_counts-pos.pattern_0.n_663-vs-ZNF558-201.alignment counts-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF558-201/ChipExo_models_ZNF558_counts-pos.pattern_10.n_22-vs-ZNF558-201.alignment counts-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF558-201/ChipExo_models_ZNF558_counts-pos.pattern_1.n_187-vs-ZNF558-201.alignment counts-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF558-201/ChipExo_models_ZNF558_counts-pos.pattern_2.n_156-vs-ZNF558-201.alignment counts-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF558-201/ChipExo_models_ZNF558_counts-pos.pattern_3.n_116-vs-ZNF558-201.alignment counts-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF558-201/ChipExo_models_ZNF558_counts-pos.pattern_4.n_112-vs-ZNF558-201.alignment counts-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF558-201/ChipExo_models_ZNF558_counts-pos.pattern_5.n_51-vs-ZNF558-201.alignment counts-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF558-201/ChipExo_models_ZNF558_counts-pos.pattern_6.n_32-vs-ZNF558-201.alignment counts-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF558-201/ChipExo_models_ZNF558_counts-pos.pattern_7.n_30-vs-ZNF558-201.alignment counts-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF558-201/ChipExo_models_ZNF558_counts-pos.pattern_8.n_26-vs-ZNF558-201.alignment counts-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF558-201/ChipExo_models_ZNF558_counts-pos.pattern_9.n_25-vs-ZNF558-201.alignment counts-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF558-201/pos_patterns.ENCSR154YWK_ChIP_ZNF558_HepG2_ENCSR566GRR_counts_pattern_0.n_2385-vs-ZNF558-201.alignment counts-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF558-201/pos_patterns.ENCSR154YWK_ChIP_ZNF558_HepG2_ENCSR566GRR_counts_pattern_1.n_2184-vs-ZNF558-201.alignment counts-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF558-201/pos_patterns.ENCSR154YWK_ChIP_ZNF558_HepG2_ENCSR566GRR_counts_pattern_2.n_2068-vs-ZNF558-201.alignment counts-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF558-201/pos_patterns.ENCSR154YWK_ChIP_ZNF558_HepG2_ENCSR566GRR_counts_pattern_3.n_1912-vs-ZNF558-201.alignment counts-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF558-201/pos_patterns.ENCSR154YWK_ChIP_ZNF558_HepG2_ENCSR566GRR_counts_pattern_4.n_410-vs-ZNF558-201.alignment counts-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF558-201/pos_patterns.ENCSR154YWK_ChIP_ZNF558_HepG2_ENCSR566GRR_counts_pattern_5.n_324-vs-ZNF558-201.alignment counts-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF558-201/pos_patterns.ENCSR154YWK_ChIP_ZNF558_HepG2_ENCSR566GRR_counts_pattern_6.n_55-vs-ZNF558-201.alignment counts-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF558-201/pos_patterns.ENCSR447ZTA_ChIP_ZNF558_HEK293_ENCSR660APU_counts_pattern_0.n_2786-vs-ZNF558-201.alignment counts-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF558-201/pos_patterns.ENCSR447ZTA_ChIP_ZNF558_HEK293_ENCSR660APU_counts_pattern_10.n_92-vs-ZNF558-201.alignment counts-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF558-201/pos_patterns.ENCSR447ZTA_ChIP_ZNF558_HEK293_ENCSR660APU_counts_pattern_11.n_56-vs-ZNF558-201.alignment counts-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF558-201/pos_patterns.ENCSR447ZTA_ChIP_ZNF558_HEK293_ENCSR660APU_counts_pattern_12.n_37-vs-ZNF558-201.alignment counts-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF558-201/pos_patterns.ENCSR447ZTA_ChIP_ZNF558_HEK293_ENCSR660APU_counts_pattern_1.n_2293-vs-ZNF558-201.alignment counts-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF558-201/pos_patterns.ENCSR447ZTA_ChIP_ZNF558_HEK293_ENCSR660APU_counts_pattern_2.n_1889-vs-ZNF558-201.alignment counts-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF558-201/pos_patterns.ENCSR447ZTA_ChIP_ZNF558_HEK293_ENCSR660APU_counts_pattern_3.n_1807-vs-ZNF558-201.alignment counts-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF558-201/pos_patterns.ENCSR447ZTA_ChIP_ZNF558_HEK293_ENCSR660APU_counts_pattern_4.n_653-vs-ZNF558-201.alignment counts-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF558-201/pos_patterns.ENCSR447ZTA_ChIP_ZNF558_HEK293_ENCSR660APU_counts_pattern_5.n_270-vs-ZNF558-201.alignment counts-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF558-201/pos_patterns.ENCSR447ZTA_ChIP_ZNF558_HEK293_ENCSR660APU_counts_pattern_6.n_239-vs-ZNF558-201.alignment counts-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF558-201/pos_patterns.ENCSR447ZTA_ChIP_ZNF558_HEK293_ENCSR660APU_counts_pattern_7.n_141-vs-ZNF558-201.alignment counts-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF558-201/pos_patterns.ENCSR447ZTA_ChIP_ZNF558_HEK293_ENCSR660APU_counts_pattern_8.n_113-vs-ZNF558-201.alignment counts-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF558-201/pos_patterns.ENCSR447ZTA_ChIP_ZNF558_HEK293_ENCSR660APU_counts_pattern_9.n_100-vs-ZNF558-201.alignment counts-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF560-201/pos_patterns.ENCSR538RDA_ChIP_ZNF560_HEK293_ENCSR425DDX_counts_pattern_0.n_2969-vs-ZNF560-201.alignment counts-znf_b1h_alignment/ZNF560-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF560-201/pos_patterns.ENCSR538RDA_ChIP_ZNF560_HEK293_ENCSR425DDX_counts_pattern_1.n_366-vs-ZNF560-201.alignment counts-znf_b1h_alignment/ZNF560-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF560-201/pos_patterns.ENCSR538RDA_ChIP_ZNF560_HEK293_ENCSR425DDX_counts_pattern_2.n_87-vs-ZNF560-201.alignment counts-znf_b1h_alignment/ZNF560-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF560-201/pos_patterns.ENCSR538RDA_ChIP_ZNF560_HEK293_ENCSR425DDX_counts_pattern_3.n_30-vs-ZNF560-201.alignment counts-znf_b1h_alignment/ZNF560-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/ChipExo_models_ZNF561_counts-pos.pattern_0.n_959-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/ChipExo_models_ZNF561_counts-pos.pattern_1.n_562-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/ChipExo_models_ZNF561_counts-pos.pattern_2.n_231-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/ChipExo_models_ZNF561_counts-pos.pattern_3.n_162-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/ChipExo_models_ZNF561_counts-pos.pattern_4.n_129-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/ChipExo_models_ZNF561_counts-pos.pattern_5.n_87-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/ChipExo_models_ZNF561_counts-pos.pattern_6.n_39-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/ChipExo_models_ZNF561_counts-pos.pattern_7.n_34-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/ChipExo_models_ZNF561_counts-pos.pattern_8.n_22-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/ChipExo_models_ZNF561_counts-pos.pattern_9.n_21-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/neg_patterns.ENCSR125ULS_ChIP_ZNF561_HEK293_ENCSR626JLM_counts_pattern_0.n_101-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/neg_patterns.ENCSR125ULS_ChIP_ZNF561_HEK293_ENCSR626JLM_counts_pattern_1.n_76-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/neg_patterns.ENCSR125ULS_ChIP_ZNF561_HEK293_ENCSR626JLM_counts_pattern_2.n_42-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/neg_patterns.ENCSR125ULS_ChIP_ZNF561_HEK293_ENCSR626JLM_counts_pattern_3.n_39-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/neg_patterns.ENCSR125ULS_ChIP_ZNF561_HEK293_ENCSR626JLM_counts_pattern_4.n_32-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/neg_patterns.ENCSR125ULS_ChIP_ZNF561_HEK293_ENCSR626JLM_counts_pattern_5.n_30-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/neg_patterns.ENCSR125ULS_ChIP_ZNF561_HEK293_ENCSR626JLM_counts_pattern_6.n_28-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/neg_patterns.ENCSR125ULS_ChIP_ZNF561_HEK293_ENCSR626JLM_counts_pattern_7.n_23-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/neg_patterns.ENCSR125ULS_ChIP_ZNF561_HEK293_ENCSR626JLM_counts_pattern_8.n_23-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR125ULS_ChIP_ZNF561_HEK293_ENCSR626JLM_counts_pattern_0.n_4528-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR125ULS_ChIP_ZNF561_HEK293_ENCSR626JLM_counts_pattern_10.n_217-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR125ULS_ChIP_ZNF561_HEK293_ENCSR626JLM_counts_pattern_11.n_206-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR125ULS_ChIP_ZNF561_HEK293_ENCSR626JLM_counts_pattern_12.n_148-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR125ULS_ChIP_ZNF561_HEK293_ENCSR626JLM_counts_pattern_13.n_87-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR125ULS_ChIP_ZNF561_HEK293_ENCSR626JLM_counts_pattern_14.n_58-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR125ULS_ChIP_ZNF561_HEK293_ENCSR626JLM_counts_pattern_15.n_29-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR125ULS_ChIP_ZNF561_HEK293_ENCSR626JLM_counts_pattern_16.n_23-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR125ULS_ChIP_ZNF561_HEK293_ENCSR626JLM_counts_pattern_1.n_2349-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR125ULS_ChIP_ZNF561_HEK293_ENCSR626JLM_counts_pattern_2.n_1653-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR125ULS_ChIP_ZNF561_HEK293_ENCSR626JLM_counts_pattern_3.n_1156-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR125ULS_ChIP_ZNF561_HEK293_ENCSR626JLM_counts_pattern_4.n_846-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR125ULS_ChIP_ZNF561_HEK293_ENCSR626JLM_counts_pattern_5.n_675-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR125ULS_ChIP_ZNF561_HEK293_ENCSR626JLM_counts_pattern_6.n_623-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR125ULS_ChIP_ZNF561_HEK293_ENCSR626JLM_counts_pattern_7.n_545-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR125ULS_ChIP_ZNF561_HEK293_ENCSR626JLM_counts_pattern_8.n_499-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR125ULS_ChIP_ZNF561_HEK293_ENCSR626JLM_counts_pattern_9.n_365-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR350GZC_ChIP_ZNF561_K562_ENCSR329MRV_counts_pattern_0.n_207-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR350GZC_ChIP_ZNF561_K562_ENCSR329MRV_counts_pattern_10.n_20-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR350GZC_ChIP_ZNF561_K562_ENCSR329MRV_counts_pattern_1.n_151-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR350GZC_ChIP_ZNF561_K562_ENCSR329MRV_counts_pattern_2.n_116-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR350GZC_ChIP_ZNF561_K562_ENCSR329MRV_counts_pattern_3.n_72-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR350GZC_ChIP_ZNF561_K562_ENCSR329MRV_counts_pattern_4.n_56-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR350GZC_ChIP_ZNF561_K562_ENCSR329MRV_counts_pattern_5.n_46-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR350GZC_ChIP_ZNF561_K562_ENCSR329MRV_counts_pattern_6.n_37-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR350GZC_ChIP_ZNF561_K562_ENCSR329MRV_counts_pattern_7.n_34-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR350GZC_ChIP_ZNF561_K562_ENCSR329MRV_counts_pattern_8.n_28-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR350GZC_ChIP_ZNF561_K562_ENCSR329MRV_counts_pattern_9.n_22-vs-ZNF561-201.alignment counts-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF562-202/ChipExo_models_ZNF562_counts-pos.pattern_0.n_149-vs-ZNF562-202.alignment counts-znf_b1h_alignment/ZNF562-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF562-202/ChipExo_models_ZNF562_counts-pos.pattern_1.n_114-vs-ZNF562-202.alignment counts-znf_b1h_alignment/ZNF562-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF562-202/ChipExo_models_ZNF562_counts-pos.pattern_2.n_76-vs-ZNF562-202.alignment counts-znf_b1h_alignment/ZNF562-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF562-202/ChipExo_models_ZNF562_counts-pos.pattern_3.n_59-vs-ZNF562-202.alignment counts-znf_b1h_alignment/ZNF562-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF562-202/ChipExo_models_ZNF562_counts-pos.pattern_4.n_36-vs-ZNF562-202.alignment counts-znf_b1h_alignment/ZNF562-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF562-202/ChipExo_models_ZNF562_counts-pos.pattern_5.n_21-vs-ZNF562-202.alignment counts-znf_b1h_alignment/ZNF562-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF562-202/pos_patterns.ENCSR727IJD_ChIP_ZNF562_HepG2_ENCSR281SKK_counts_pattern_0.n_304-vs-ZNF562-202.alignment counts-znf_b1h_alignment/ZNF562-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF562-202/pos_patterns.ENCSR727IJD_ChIP_ZNF562_HepG2_ENCSR281SKK_counts_pattern_10.n_37-vs-ZNF562-202.alignment counts-znf_b1h_alignment/ZNF562-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF562-202/pos_patterns.ENCSR727IJD_ChIP_ZNF562_HepG2_ENCSR281SKK_counts_pattern_11.n_26-vs-ZNF562-202.alignment counts-znf_b1h_alignment/ZNF562-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF562-202/pos_patterns.ENCSR727IJD_ChIP_ZNF562_HepG2_ENCSR281SKK_counts_pattern_1.n_228-vs-ZNF562-202.alignment counts-znf_b1h_alignment/ZNF562-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF562-202/pos_patterns.ENCSR727IJD_ChIP_ZNF562_HepG2_ENCSR281SKK_counts_pattern_2.n_171-vs-ZNF562-202.alignment counts-znf_b1h_alignment/ZNF562-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF562-202/pos_patterns.ENCSR727IJD_ChIP_ZNF562_HepG2_ENCSR281SKK_counts_pattern_3.n_117-vs-ZNF562-202.alignment counts-znf_b1h_alignment/ZNF562-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF562-202/pos_patterns.ENCSR727IJD_ChIP_ZNF562_HepG2_ENCSR281SKK_counts_pattern_4.n_89-vs-ZNF562-202.alignment counts-znf_b1h_alignment/ZNF562-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF562-202/pos_patterns.ENCSR727IJD_ChIP_ZNF562_HepG2_ENCSR281SKK_counts_pattern_5.n_72-vs-ZNF562-202.alignment counts-znf_b1h_alignment/ZNF562-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF562-202/pos_patterns.ENCSR727IJD_ChIP_ZNF562_HepG2_ENCSR281SKK_counts_pattern_6.n_68-vs-ZNF562-202.alignment counts-znf_b1h_alignment/ZNF562-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF562-202/pos_patterns.ENCSR727IJD_ChIP_ZNF562_HepG2_ENCSR281SKK_counts_pattern_7.n_46-vs-ZNF562-202.alignment counts-znf_b1h_alignment/ZNF562-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF562-202/pos_patterns.ENCSR727IJD_ChIP_ZNF562_HepG2_ENCSR281SKK_counts_pattern_8.n_45-vs-ZNF562-202.alignment counts-znf_b1h_alignment/ZNF562-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF562-202/pos_patterns.ENCSR727IJD_ChIP_ZNF562_HepG2_ENCSR281SKK_counts_pattern_9.n_40-vs-ZNF562-202.alignment counts-znf_b1h_alignment/ZNF562-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-201/Hughes_GR_models_ZNF563_counts-pos.pattern_0.n_1773-vs-ZNF563-201.alignment counts-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-201/Hughes_GR_models_ZNF563_counts-pos.pattern_1.n_809-vs-ZNF563-201.alignment counts-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-201/Hughes_GR_models_ZNF563_counts-pos.pattern_2.n_376-vs-ZNF563-201.alignment counts-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-201/Hughes_GR_models_ZNF563_counts-pos.pattern_3.n_151-vs-ZNF563-201.alignment counts-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-201/Hughes_GR_models_ZNF563_counts-pos.pattern_4.n_137-vs-ZNF563-201.alignment counts-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-201/Hughes_GR_models_ZNF563_counts-pos.pattern_5.n_131-vs-ZNF563-201.alignment counts-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-201/Hughes_GR_models_ZNF563_counts-pos.pattern_6.n_91-vs-ZNF563-201.alignment counts-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-201/Hughes_GR_models_ZNF563_counts-pos.pattern_7.n_28-vs-ZNF563-201.alignment counts-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-201/Hughes_GR_models_ZNF563_counts-pos.pattern_8.n_27-vs-ZNF563-201.alignment counts-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-201/Hughes_GR_models_ZNF563_counts-pos.pattern_9.n_20-vs-ZNF563-201.alignment counts-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-201/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_counts_pattern_0.n_2920-vs-ZNF563-201.alignment counts-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-201/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_counts_pattern_10.n_121-vs-ZNF563-201.alignment counts-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-201/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_counts_pattern_11.n_113-vs-ZNF563-201.alignment counts-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-201/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_counts_pattern_12.n_103-vs-ZNF563-201.alignment counts-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-201/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_counts_pattern_13.n_100-vs-ZNF563-201.alignment counts-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-201/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_counts_pattern_14.n_70-vs-ZNF563-201.alignment counts-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-201/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_counts_pattern_15.n_61-vs-ZNF563-201.alignment counts-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-201/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_counts_pattern_16.n_39-vs-ZNF563-201.alignment counts-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-201/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_counts_pattern_17.n_37-vs-ZNF563-201.alignment counts-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-201/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_counts_pattern_18.n_34-vs-ZNF563-201.alignment counts-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-201/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_counts_pattern_19.n_24-vs-ZNF563-201.alignment counts-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-201/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_counts_pattern_1.n_2548-vs-ZNF563-201.alignment counts-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-201/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_counts_pattern_2.n_2219-vs-ZNF563-201.alignment counts-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-201/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_counts_pattern_3.n_1996-vs-ZNF563-201.alignment counts-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-201/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_counts_pattern_4.n_576-vs-ZNF563-201.alignment counts-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-201/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_counts_pattern_5.n_563-vs-ZNF563-201.alignment counts-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-201/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_counts_pattern_6.n_377-vs-ZNF563-201.alignment counts-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-201/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_counts_pattern_7.n_344-vs-ZNF563-201.alignment counts-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-201/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_counts_pattern_8.n_258-vs-ZNF563-201.alignment counts-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-201/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_counts_pattern_9.n_258-vs-ZNF563-201.alignment counts-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-203/Hughes_GR_models_ZNF563_counts-pos.pattern_0.n_1773-vs-ZNF563-203.alignment counts-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-203/Hughes_GR_models_ZNF563_counts-pos.pattern_1.n_809-vs-ZNF563-203.alignment counts-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-203/Hughes_GR_models_ZNF563_counts-pos.pattern_2.n_376-vs-ZNF563-203.alignment counts-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-203/Hughes_GR_models_ZNF563_counts-pos.pattern_3.n_151-vs-ZNF563-203.alignment counts-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-203/Hughes_GR_models_ZNF563_counts-pos.pattern_4.n_137-vs-ZNF563-203.alignment counts-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-203/Hughes_GR_models_ZNF563_counts-pos.pattern_5.n_131-vs-ZNF563-203.alignment counts-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-203/Hughes_GR_models_ZNF563_counts-pos.pattern_6.n_91-vs-ZNF563-203.alignment counts-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-203/Hughes_GR_models_ZNF563_counts-pos.pattern_7.n_28-vs-ZNF563-203.alignment counts-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-203/Hughes_GR_models_ZNF563_counts-pos.pattern_8.n_27-vs-ZNF563-203.alignment counts-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-203/Hughes_GR_models_ZNF563_counts-pos.pattern_9.n_20-vs-ZNF563-203.alignment counts-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-203/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_counts_pattern_0.n_2920-vs-ZNF563-203.alignment counts-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-203/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_counts_pattern_10.n_121-vs-ZNF563-203.alignment counts-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-203/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_counts_pattern_11.n_113-vs-ZNF563-203.alignment counts-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-203/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_counts_pattern_12.n_103-vs-ZNF563-203.alignment counts-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-203/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_counts_pattern_13.n_100-vs-ZNF563-203.alignment counts-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-203/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_counts_pattern_14.n_70-vs-ZNF563-203.alignment counts-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-203/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_counts_pattern_15.n_61-vs-ZNF563-203.alignment counts-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-203/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_counts_pattern_16.n_39-vs-ZNF563-203.alignment counts-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-203/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_counts_pattern_17.n_37-vs-ZNF563-203.alignment counts-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-203/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_counts_pattern_18.n_34-vs-ZNF563-203.alignment counts-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-203/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_counts_pattern_19.n_24-vs-ZNF563-203.alignment counts-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-203/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_counts_pattern_1.n_2548-vs-ZNF563-203.alignment counts-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-203/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_counts_pattern_2.n_2219-vs-ZNF563-203.alignment counts-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-203/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_counts_pattern_3.n_1996-vs-ZNF563-203.alignment counts-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-203/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_counts_pattern_4.n_576-vs-ZNF563-203.alignment counts-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-203/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_counts_pattern_5.n_563-vs-ZNF563-203.alignment counts-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-203/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_counts_pattern_6.n_377-vs-ZNF563-203.alignment counts-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-203/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_counts_pattern_7.n_344-vs-ZNF563-203.alignment counts-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-203/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_counts_pattern_8.n_258-vs-ZNF563-203.alignment counts-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF563-203/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_counts_pattern_9.n_258-vs-ZNF563-203.alignment counts-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF564-201/ChipExo_models_ZNF564_counts-pos.pattern_0.n_423-vs-ZNF564-201.alignment counts-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF564-201/neg_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_counts_pattern_0.n_30-vs-ZNF564-201.alignment counts-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF564-201/neg_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_counts_pattern_1.n_24-vs-ZNF564-201.alignment counts-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF564-201/neg_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_counts_pattern_2.n_24-vs-ZNF564-201.alignment counts-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF564-201/neg_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_counts_pattern_3.n_23-vs-ZNF564-201.alignment counts-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF564-201/pos_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_counts_pattern_0.n_2127-vs-ZNF564-201.alignment counts-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF564-201/pos_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_counts_pattern_10.n_37-vs-ZNF564-201.alignment counts-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF564-201/pos_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_counts_pattern_11.n_33-vs-ZNF564-201.alignment counts-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF564-201/pos_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_counts_pattern_12.n_25-vs-ZNF564-201.alignment counts-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF564-201/pos_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_counts_pattern_13.n_25-vs-ZNF564-201.alignment counts-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF564-201/pos_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_counts_pattern_14.n_20-vs-ZNF564-201.alignment counts-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF564-201/pos_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_counts_pattern_1.n_1992-vs-ZNF564-201.alignment counts-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF564-201/pos_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_counts_pattern_2.n_1156-vs-ZNF564-201.alignment counts-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF564-201/pos_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_counts_pattern_3.n_1124-vs-ZNF564-201.alignment counts-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF564-201/pos_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_counts_pattern_4.n_752-vs-ZNF564-201.alignment counts-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF564-201/pos_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_counts_pattern_5.n_458-vs-ZNF564-201.alignment counts-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF564-201/pos_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_counts_pattern_6.n_430-vs-ZNF564-201.alignment counts-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF564-201/pos_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_counts_pattern_7.n_319-vs-ZNF564-201.alignment counts-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF564-201/pos_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_counts_pattern_8.n_91-vs-ZNF564-201.alignment counts-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF564-201/pos_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_counts_pattern_9.n_87-vs-ZNF564-201.alignment counts-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF565-201/ChipExo_models_ZNF565_counts-pos.pattern_0.n_730-vs-ZNF565-201.alignment counts-znf_b1h_alignment/ZNF565-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF565-201/pos_patterns.ENCSR754ALX_ChIP_ZNF565_SK-N-SH_ENCSR545WAG_counts_pattern_0.n_318-vs-ZNF565-201.alignment counts-znf_b1h_alignment/ZNF565-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF565-201/pos_patterns.ENCSR754ALX_ChIP_ZNF565_SK-N-SH_ENCSR545WAG_counts_pattern_10.n_28-vs-ZNF565-201.alignment counts-znf_b1h_alignment/ZNF565-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF565-201/pos_patterns.ENCSR754ALX_ChIP_ZNF565_SK-N-SH_ENCSR545WAG_counts_pattern_11.n_23-vs-ZNF565-201.alignment counts-znf_b1h_alignment/ZNF565-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF565-201/pos_patterns.ENCSR754ALX_ChIP_ZNF565_SK-N-SH_ENCSR545WAG_counts_pattern_12.n_22-vs-ZNF565-201.alignment counts-znf_b1h_alignment/ZNF565-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF565-201/pos_patterns.ENCSR754ALX_ChIP_ZNF565_SK-N-SH_ENCSR545WAG_counts_pattern_1.n_126-vs-ZNF565-201.alignment counts-znf_b1h_alignment/ZNF565-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF565-201/pos_patterns.ENCSR754ALX_ChIP_ZNF565_SK-N-SH_ENCSR545WAG_counts_pattern_2.n_95-vs-ZNF565-201.alignment counts-znf_b1h_alignment/ZNF565-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF565-201/pos_patterns.ENCSR754ALX_ChIP_ZNF565_SK-N-SH_ENCSR545WAG_counts_pattern_3.n_83-vs-ZNF565-201.alignment counts-znf_b1h_alignment/ZNF565-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF565-201/pos_patterns.ENCSR754ALX_ChIP_ZNF565_SK-N-SH_ENCSR545WAG_counts_pattern_4.n_81-vs-ZNF565-201.alignment counts-znf_b1h_alignment/ZNF565-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF565-201/pos_patterns.ENCSR754ALX_ChIP_ZNF565_SK-N-SH_ENCSR545WAG_counts_pattern_5.n_76-vs-ZNF565-201.alignment counts-znf_b1h_alignment/ZNF565-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF565-201/pos_patterns.ENCSR754ALX_ChIP_ZNF565_SK-N-SH_ENCSR545WAG_counts_pattern_6.n_74-vs-ZNF565-201.alignment counts-znf_b1h_alignment/ZNF565-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF565-201/pos_patterns.ENCSR754ALX_ChIP_ZNF565_SK-N-SH_ENCSR545WAG_counts_pattern_7.n_66-vs-ZNF565-201.alignment counts-znf_b1h_alignment/ZNF565-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF565-201/pos_patterns.ENCSR754ALX_ChIP_ZNF565_SK-N-SH_ENCSR545WAG_counts_pattern_8.n_65-vs-ZNF565-201.alignment counts-znf_b1h_alignment/ZNF565-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF565-201/pos_patterns.ENCSR754ALX_ChIP_ZNF565_SK-N-SH_ENCSR545WAG_counts_pattern_9.n_45-vs-ZNF565-201.alignment counts-znf_b1h_alignment/ZNF565-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF566-201/ChipExo_models_ZNF566_counts-pos.pattern_0.n_305-vs-ZNF566-201.alignment counts-znf_b1h_alignment/ZNF566-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF566-201/ChipExo_models_ZNF566_counts-pos.pattern_1.n_198-vs-ZNF566-201.alignment counts-znf_b1h_alignment/ZNF566-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF566-201/ChipExo_models_ZNF566_counts-pos.pattern_2.n_196-vs-ZNF566-201.alignment counts-znf_b1h_alignment/ZNF566-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF566-201/ChipExo_models_ZNF566_counts-pos.pattern_3.n_94-vs-ZNF566-201.alignment counts-znf_b1h_alignment/ZNF566-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF566-201/ChipExo_models_ZNF566_counts-pos.pattern_4.n_38-vs-ZNF566-201.alignment counts-znf_b1h_alignment/ZNF566-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF566-201/ChipExo_models_ZNF566_counts-pos.pattern_5.n_28-vs-ZNF566-201.alignment counts-znf_b1h_alignment/ZNF566-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF566-201/ChipExo_models_ZNF566_counts-pos.pattern_6.n_28-vs-ZNF566-201.alignment counts-znf_b1h_alignment/ZNF566-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF566-201/ChipExo_models_ZNF566_counts-pos.pattern_7.n_22-vs-ZNF566-201.alignment counts-znf_b1h_alignment/ZNF566-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF567-201/ChipExo_models_ZNF567_counts-pos.pattern_0.n_808-vs-ZNF567-201.alignment counts-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF567-201/ChipExo_models_ZNF567_counts-pos.pattern_1.n_29-vs-ZNF567-201.alignment counts-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF567-201/neg_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_counts_pattern_0.n_45-vs-ZNF567-201.alignment counts-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF567-201/neg_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_counts_pattern_1.n_36-vs-ZNF567-201.alignment counts-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF567-201/neg_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_counts_pattern_2.n_20-vs-ZNF567-201.alignment counts-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_counts_pattern_0.n_1228-vs-ZNF567-201.alignment counts-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_counts_pattern_10.n_298-vs-ZNF567-201.alignment counts-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_counts_pattern_11.n_260-vs-ZNF567-201.alignment counts-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_counts_pattern_12.n_220-vs-ZNF567-201.alignment counts-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_counts_pattern_13.n_219-vs-ZNF567-201.alignment counts-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_counts_pattern_14.n_193-vs-ZNF567-201.alignment counts-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_counts_pattern_15.n_173-vs-ZNF567-201.alignment counts-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_counts_pattern_16.n_162-vs-ZNF567-201.alignment counts-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_counts_pattern_17.n_155-vs-ZNF567-201.alignment counts-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_counts_pattern_18.n_145-vs-ZNF567-201.alignment counts-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_counts_pattern_19.n_122-vs-ZNF567-201.alignment counts-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_counts_pattern_1.n_1100-vs-ZNF567-201.alignment counts-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_counts_pattern_20.n_119-vs-ZNF567-201.alignment counts-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_counts_pattern_21.n_96-vs-ZNF567-201.alignment counts-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_counts_pattern_22.n_83-vs-ZNF567-201.alignment counts-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_counts_pattern_23.n_72-vs-ZNF567-201.alignment counts-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_counts_pattern_24.n_46-vs-ZNF567-201.alignment counts-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_counts_pattern_25.n_42-vs-ZNF567-201.alignment counts-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_counts_pattern_2.n_898-vs-ZNF567-201.alignment counts-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_counts_pattern_3.n_782-vs-ZNF567-201.alignment counts-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_counts_pattern_4.n_724-vs-ZNF567-201.alignment counts-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_counts_pattern_5.n_538-vs-ZNF567-201.alignment counts-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_counts_pattern_6.n_348-vs-ZNF567-201.alignment counts-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_counts_pattern_7.n_348-vs-ZNF567-201.alignment counts-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_counts_pattern_8.n_345-vs-ZNF567-201.alignment counts-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_counts_pattern_9.n_314-vs-ZNF567-201.alignment counts-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF569-201/neg_patterns.ENCSR225SLE_ChIP_ZNF569_HepG2_ENCSR886VKM_counts_pattern_0.n_20-vs-ZNF569-201.alignment counts-znf_b1h_alignment/ZNF569-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF569-201/pos_patterns.ENCSR225SLE_ChIP_ZNF569_HepG2_ENCSR886VKM_counts_pattern_0.n_631-vs-ZNF569-201.alignment counts-znf_b1h_alignment/ZNF569-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF569-201/pos_patterns.ENCSR225SLE_ChIP_ZNF569_HepG2_ENCSR886VKM_counts_pattern_10.n_33-vs-ZNF569-201.alignment counts-znf_b1h_alignment/ZNF569-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF569-201/pos_patterns.ENCSR225SLE_ChIP_ZNF569_HepG2_ENCSR886VKM_counts_pattern_11.n_24-vs-ZNF569-201.alignment counts-znf_b1h_alignment/ZNF569-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF569-201/pos_patterns.ENCSR225SLE_ChIP_ZNF569_HepG2_ENCSR886VKM_counts_pattern_1.n_540-vs-ZNF569-201.alignment counts-znf_b1h_alignment/ZNF569-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF569-201/pos_patterns.ENCSR225SLE_ChIP_ZNF569_HepG2_ENCSR886VKM_counts_pattern_2.n_404-vs-ZNF569-201.alignment counts-znf_b1h_alignment/ZNF569-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF569-201/pos_patterns.ENCSR225SLE_ChIP_ZNF569_HepG2_ENCSR886VKM_counts_pattern_3.n_149-vs-ZNF569-201.alignment counts-znf_b1h_alignment/ZNF569-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF569-201/pos_patterns.ENCSR225SLE_ChIP_ZNF569_HepG2_ENCSR886VKM_counts_pattern_4.n_138-vs-ZNF569-201.alignment counts-znf_b1h_alignment/ZNF569-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF569-201/pos_patterns.ENCSR225SLE_ChIP_ZNF569_HepG2_ENCSR886VKM_counts_pattern_5.n_118-vs-ZNF569-201.alignment counts-znf_b1h_alignment/ZNF569-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF569-201/pos_patterns.ENCSR225SLE_ChIP_ZNF569_HepG2_ENCSR886VKM_counts_pattern_6.n_86-vs-ZNF569-201.alignment counts-znf_b1h_alignment/ZNF569-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF569-201/pos_patterns.ENCSR225SLE_ChIP_ZNF569_HepG2_ENCSR886VKM_counts_pattern_7.n_69-vs-ZNF569-201.alignment counts-znf_b1h_alignment/ZNF569-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF569-201/pos_patterns.ENCSR225SLE_ChIP_ZNF569_HepG2_ENCSR886VKM_counts_pattern_8.n_68-vs-ZNF569-201.alignment counts-znf_b1h_alignment/ZNF569-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF569-201/pos_patterns.ENCSR225SLE_ChIP_ZNF569_HepG2_ENCSR886VKM_counts_pattern_9.n_45-vs-ZNF569-201.alignment counts-znf_b1h_alignment/ZNF569-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF569-203/neg_patterns.ENCSR225SLE_ChIP_ZNF569_HepG2_ENCSR886VKM_counts_pattern_0.n_20-vs-ZNF569-203.alignment counts-znf_b1h_alignment/ZNF569-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF569-203/pos_patterns.ENCSR225SLE_ChIP_ZNF569_HepG2_ENCSR886VKM_counts_pattern_0.n_631-vs-ZNF569-203.alignment counts-znf_b1h_alignment/ZNF569-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF569-203/pos_patterns.ENCSR225SLE_ChIP_ZNF569_HepG2_ENCSR886VKM_counts_pattern_10.n_33-vs-ZNF569-203.alignment counts-znf_b1h_alignment/ZNF569-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF569-203/pos_patterns.ENCSR225SLE_ChIP_ZNF569_HepG2_ENCSR886VKM_counts_pattern_11.n_24-vs-ZNF569-203.alignment counts-znf_b1h_alignment/ZNF569-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF569-203/pos_patterns.ENCSR225SLE_ChIP_ZNF569_HepG2_ENCSR886VKM_counts_pattern_1.n_540-vs-ZNF569-203.alignment counts-znf_b1h_alignment/ZNF569-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF569-203/pos_patterns.ENCSR225SLE_ChIP_ZNF569_HepG2_ENCSR886VKM_counts_pattern_2.n_404-vs-ZNF569-203.alignment counts-znf_b1h_alignment/ZNF569-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF569-203/pos_patterns.ENCSR225SLE_ChIP_ZNF569_HepG2_ENCSR886VKM_counts_pattern_3.n_149-vs-ZNF569-203.alignment counts-znf_b1h_alignment/ZNF569-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF569-203/pos_patterns.ENCSR225SLE_ChIP_ZNF569_HepG2_ENCSR886VKM_counts_pattern_4.n_138-vs-ZNF569-203.alignment counts-znf_b1h_alignment/ZNF569-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF569-203/pos_patterns.ENCSR225SLE_ChIP_ZNF569_HepG2_ENCSR886VKM_counts_pattern_5.n_118-vs-ZNF569-203.alignment counts-znf_b1h_alignment/ZNF569-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF569-203/pos_patterns.ENCSR225SLE_ChIP_ZNF569_HepG2_ENCSR886VKM_counts_pattern_6.n_86-vs-ZNF569-203.alignment counts-znf_b1h_alignment/ZNF569-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF569-203/pos_patterns.ENCSR225SLE_ChIP_ZNF569_HepG2_ENCSR886VKM_counts_pattern_7.n_69-vs-ZNF569-203.alignment counts-znf_b1h_alignment/ZNF569-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF569-203/pos_patterns.ENCSR225SLE_ChIP_ZNF569_HepG2_ENCSR886VKM_counts_pattern_8.n_68-vs-ZNF569-203.alignment counts-znf_b1h_alignment/ZNF569-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF569-203/pos_patterns.ENCSR225SLE_ChIP_ZNF569_HepG2_ENCSR886VKM_counts_pattern_9.n_45-vs-ZNF569-203.alignment counts-znf_b1h_alignment/ZNF569-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF570-201/ChipExo_models_ZNF570_counts-pos.pattern_0.n_197-vs-ZNF570-201.alignment counts-znf_b1h_alignment/ZNF570-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF570-201/ChipExo_models_ZNF570_counts-pos.pattern_1.n_55-vs-ZNF570-201.alignment counts-znf_b1h_alignment/ZNF570-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF570-201/ChipExo_models_ZNF570_counts-pos.pattern_2.n_39-vs-ZNF570-201.alignment counts-znf_b1h_alignment/ZNF570-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF570-201/neg_patterns.ENCSR055ZIA_ChIP_ZNF570_HepG2_ENCSR496UDL_counts_pattern_0.n_48-vs-ZNF570-201.alignment counts-znf_b1h_alignment/ZNF570-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF570-201/neg_patterns.ENCSR055ZIA_ChIP_ZNF570_HepG2_ENCSR496UDL_counts_pattern_1.n_39-vs-ZNF570-201.alignment counts-znf_b1h_alignment/ZNF570-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF570-201/pos_patterns.ENCSR055ZIA_ChIP_ZNF570_HepG2_ENCSR496UDL_counts_pattern_0.n_1040-vs-ZNF570-201.alignment counts-znf_b1h_alignment/ZNF570-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF570-201/pos_patterns.ENCSR055ZIA_ChIP_ZNF570_HepG2_ENCSR496UDL_counts_pattern_10.n_56-vs-ZNF570-201.alignment counts-znf_b1h_alignment/ZNF570-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF570-201/pos_patterns.ENCSR055ZIA_ChIP_ZNF570_HepG2_ENCSR496UDL_counts_pattern_11.n_39-vs-ZNF570-201.alignment counts-znf_b1h_alignment/ZNF570-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF570-201/pos_patterns.ENCSR055ZIA_ChIP_ZNF570_HepG2_ENCSR496UDL_counts_pattern_12.n_35-vs-ZNF570-201.alignment counts-znf_b1h_alignment/ZNF570-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF570-201/pos_patterns.ENCSR055ZIA_ChIP_ZNF570_HepG2_ENCSR496UDL_counts_pattern_13.n_28-vs-ZNF570-201.alignment counts-znf_b1h_alignment/ZNF570-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF570-201/pos_patterns.ENCSR055ZIA_ChIP_ZNF570_HepG2_ENCSR496UDL_counts_pattern_1.n_706-vs-ZNF570-201.alignment counts-znf_b1h_alignment/ZNF570-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF570-201/pos_patterns.ENCSR055ZIA_ChIP_ZNF570_HepG2_ENCSR496UDL_counts_pattern_2.n_463-vs-ZNF570-201.alignment counts-znf_b1h_alignment/ZNF570-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF570-201/pos_patterns.ENCSR055ZIA_ChIP_ZNF570_HepG2_ENCSR496UDL_counts_pattern_3.n_268-vs-ZNF570-201.alignment counts-znf_b1h_alignment/ZNF570-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF570-201/pos_patterns.ENCSR055ZIA_ChIP_ZNF570_HepG2_ENCSR496UDL_counts_pattern_4.n_116-vs-ZNF570-201.alignment counts-znf_b1h_alignment/ZNF570-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF570-201/pos_patterns.ENCSR055ZIA_ChIP_ZNF570_HepG2_ENCSR496UDL_counts_pattern_5.n_107-vs-ZNF570-201.alignment counts-znf_b1h_alignment/ZNF570-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF570-201/pos_patterns.ENCSR055ZIA_ChIP_ZNF570_HepG2_ENCSR496UDL_counts_pattern_6.n_105-vs-ZNF570-201.alignment counts-znf_b1h_alignment/ZNF570-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF570-201/pos_patterns.ENCSR055ZIA_ChIP_ZNF570_HepG2_ENCSR496UDL_counts_pattern_7.n_101-vs-ZNF570-201.alignment counts-znf_b1h_alignment/ZNF570-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF570-201/pos_patterns.ENCSR055ZIA_ChIP_ZNF570_HepG2_ENCSR496UDL_counts_pattern_8.n_99-vs-ZNF570-201.alignment counts-znf_b1h_alignment/ZNF570-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF570-201/pos_patterns.ENCSR055ZIA_ChIP_ZNF570_HepG2_ENCSR496UDL_counts_pattern_9.n_61-vs-ZNF570-201.alignment counts-znf_b1h_alignment/ZNF570-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF571-201/ChipExo_models_ZNF571_counts-pos.pattern_0.n_343-vs-ZNF571-201.alignment counts-znf_b1h_alignment/ZNF571-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF571-201/ChipExo_models_ZNF571_counts-pos.pattern_1.n_118-vs-ZNF571-201.alignment counts-znf_b1h_alignment/ZNF571-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF571-201/ChipExo_models_ZNF571_counts-pos.pattern_2.n_90-vs-ZNF571-201.alignment counts-znf_b1h_alignment/ZNF571-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF571-201/ChipExo_models_ZNF571_counts-pos.pattern_3.n_62-vs-ZNF571-201.alignment counts-znf_b1h_alignment/ZNF571-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF571-201/ChipExo_models_ZNF571_counts-pos.pattern_4.n_55-vs-ZNF571-201.alignment counts-znf_b1h_alignment/ZNF571-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF571-201/ChipExo_models_ZNF571_counts-pos.pattern_5.n_33-vs-ZNF571-201.alignment counts-znf_b1h_alignment/ZNF571-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF571-201/ChipExo_models_ZNF571_counts-pos.pattern_6.n_20-vs-ZNF571-201.alignment counts-znf_b1h_alignment/ZNF571-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF571-201/pos_patterns.ENCSR421QXA_ChIP_ZNF571_HEK293_ENCSR737YHP_counts_pattern_0.n_249-vs-ZNF571-201.alignment counts-znf_b1h_alignment/ZNF571-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF571-201/pos_patterns.ENCSR421QXA_ChIP_ZNF571_HEK293_ENCSR737YHP_counts_pattern_1.n_170-vs-ZNF571-201.alignment counts-znf_b1h_alignment/ZNF571-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF571-201/pos_patterns.ENCSR421QXA_ChIP_ZNF571_HEK293_ENCSR737YHP_counts_pattern_2.n_143-vs-ZNF571-201.alignment counts-znf_b1h_alignment/ZNF571-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF571-201/pos_patterns.ENCSR421QXA_ChIP_ZNF571_HEK293_ENCSR737YHP_counts_pattern_3.n_30-vs-ZNF571-201.alignment counts-znf_b1h_alignment/ZNF571-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF571-201/pos_patterns.ENCSR421QXA_ChIP_ZNF571_HEK293_ENCSR737YHP_counts_pattern_4.n_25-vs-ZNF571-201.alignment counts-znf_b1h_alignment/ZNF571-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF571-201/pos_patterns.ENCSR421QXA_ChIP_ZNF571_HEK293_ENCSR737YHP_counts_pattern_5.n_21-vs-ZNF571-201.alignment counts-znf_b1h_alignment/ZNF571-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF571-201/pos_patterns.ENCSR697CNF_ChIP_ZNF571_HepG2_ENCSR503GCJ_counts_pattern_0.n_1216-vs-ZNF571-201.alignment counts-znf_b1h_alignment/ZNF571-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF571-201/pos_patterns.ENCSR697CNF_ChIP_ZNF571_HepG2_ENCSR503GCJ_counts_pattern_10.n_213-vs-ZNF571-201.alignment counts-znf_b1h_alignment/ZNF571-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF571-201/pos_patterns.ENCSR697CNF_ChIP_ZNF571_HepG2_ENCSR503GCJ_counts_pattern_11.n_212-vs-ZNF571-201.alignment counts-znf_b1h_alignment/ZNF571-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF571-201/pos_patterns.ENCSR697CNF_ChIP_ZNF571_HepG2_ENCSR503GCJ_counts_pattern_12.n_179-vs-ZNF571-201.alignment counts-znf_b1h_alignment/ZNF571-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF571-201/pos_patterns.ENCSR697CNF_ChIP_ZNF571_HepG2_ENCSR503GCJ_counts_pattern_13.n_173-vs-ZNF571-201.alignment counts-znf_b1h_alignment/ZNF571-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF571-201/pos_patterns.ENCSR697CNF_ChIP_ZNF571_HepG2_ENCSR503GCJ_counts_pattern_14.n_172-vs-ZNF571-201.alignment counts-znf_b1h_alignment/ZNF571-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF571-201/pos_patterns.ENCSR697CNF_ChIP_ZNF571_HepG2_ENCSR503GCJ_counts_pattern_15.n_162-vs-ZNF571-201.alignment counts-znf_b1h_alignment/ZNF571-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF571-201/pos_patterns.ENCSR697CNF_ChIP_ZNF571_HepG2_ENCSR503GCJ_counts_pattern_16.n_123-vs-ZNF571-201.alignment counts-znf_b1h_alignment/ZNF571-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF571-201/pos_patterns.ENCSR697CNF_ChIP_ZNF571_HepG2_ENCSR503GCJ_counts_pattern_17.n_123-vs-ZNF571-201.alignment counts-znf_b1h_alignment/ZNF571-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF571-201/pos_patterns.ENCSR697CNF_ChIP_ZNF571_HepG2_ENCSR503GCJ_counts_pattern_18.n_118-vs-ZNF571-201.alignment counts-znf_b1h_alignment/ZNF571-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF571-201/pos_patterns.ENCSR697CNF_ChIP_ZNF571_HepG2_ENCSR503GCJ_counts_pattern_19.n_117-vs-ZNF571-201.alignment counts-znf_b1h_alignment/ZNF571-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF571-201/pos_patterns.ENCSR697CNF_ChIP_ZNF571_HepG2_ENCSR503GCJ_counts_pattern_1.n_618-vs-ZNF571-201.alignment counts-znf_b1h_alignment/ZNF571-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF571-201/pos_patterns.ENCSR697CNF_ChIP_ZNF571_HepG2_ENCSR503GCJ_counts_pattern_20.n_54-vs-ZNF571-201.alignment counts-znf_b1h_alignment/ZNF571-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF571-201/pos_patterns.ENCSR697CNF_ChIP_ZNF571_HepG2_ENCSR503GCJ_counts_pattern_2.n_402-vs-ZNF571-201.alignment counts-znf_b1h_alignment/ZNF571-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF571-201/pos_patterns.ENCSR697CNF_ChIP_ZNF571_HepG2_ENCSR503GCJ_counts_pattern_3.n_332-vs-ZNF571-201.alignment counts-znf_b1h_alignment/ZNF571-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF571-201/pos_patterns.ENCSR697CNF_ChIP_ZNF571_HepG2_ENCSR503GCJ_counts_pattern_4.n_302-vs-ZNF571-201.alignment counts-znf_b1h_alignment/ZNF571-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF571-201/pos_patterns.ENCSR697CNF_ChIP_ZNF571_HepG2_ENCSR503GCJ_counts_pattern_5.n_292-vs-ZNF571-201.alignment counts-znf_b1h_alignment/ZNF571-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF571-201/pos_patterns.ENCSR697CNF_ChIP_ZNF571_HepG2_ENCSR503GCJ_counts_pattern_6.n_251-vs-ZNF571-201.alignment counts-znf_b1h_alignment/ZNF571-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF571-201/pos_patterns.ENCSR697CNF_ChIP_ZNF571_HepG2_ENCSR503GCJ_counts_pattern_7.n_251-vs-ZNF571-201.alignment counts-znf_b1h_alignment/ZNF571-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF571-201/pos_patterns.ENCSR697CNF_ChIP_ZNF571_HepG2_ENCSR503GCJ_counts_pattern_8.n_243-vs-ZNF571-201.alignment counts-znf_b1h_alignment/ZNF571-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF571-201/pos_patterns.ENCSR697CNF_ChIP_ZNF571_HepG2_ENCSR503GCJ_counts_pattern_9.n_243-vs-ZNF571-201.alignment counts-znf_b1h_alignment/ZNF571-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF57-201/pos_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_counts_pattern_0.n_181-vs-ZNF57-201.alignment counts-znf_b1h_alignment/ZNF57-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF57-201/pos_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_counts_pattern_1.n_169-vs-ZNF57-201.alignment counts-znf_b1h_alignment/ZNF57-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF57-201/pos_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_counts_pattern_2.n_162-vs-ZNF57-201.alignment counts-znf_b1h_alignment/ZNF57-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF57-201/pos_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_counts_pattern_3.n_69-vs-ZNF57-201.alignment counts-znf_b1h_alignment/ZNF57-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF57-201/pos_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_counts_pattern_4.n_48-vs-ZNF57-201.alignment counts-znf_b1h_alignment/ZNF57-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF57-201/pos_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_counts_pattern_5.n_40-vs-ZNF57-201.alignment counts-znf_b1h_alignment/ZNF57-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF57-201/pos_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_counts_pattern_6.n_30-vs-ZNF57-201.alignment counts-znf_b1h_alignment/ZNF57-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF57-201/pos_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_counts_pattern_7.n_28-vs-ZNF57-201.alignment counts-znf_b1h_alignment/ZNF57-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF57-201/pos_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_counts_pattern_8.n_24-vs-ZNF57-201.alignment counts-znf_b1h_alignment/ZNF57-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF57-201/pos_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_counts_pattern_9.n_22-vs-ZNF57-201.alignment counts-znf_b1h_alignment/ZNF57-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF57-205/pos_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_counts_pattern_0.n_181-vs-ZNF57-205.alignment counts-znf_b1h_alignment/ZNF57-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF57-205/pos_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_counts_pattern_1.n_169-vs-ZNF57-205.alignment counts-znf_b1h_alignment/ZNF57-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF57-205/pos_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_counts_pattern_2.n_162-vs-ZNF57-205.alignment counts-znf_b1h_alignment/ZNF57-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF57-205/pos_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_counts_pattern_3.n_69-vs-ZNF57-205.alignment counts-znf_b1h_alignment/ZNF57-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF57-205/pos_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_counts_pattern_4.n_48-vs-ZNF57-205.alignment counts-znf_b1h_alignment/ZNF57-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF57-205/pos_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_counts_pattern_5.n_40-vs-ZNF57-205.alignment counts-znf_b1h_alignment/ZNF57-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF57-205/pos_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_counts_pattern_6.n_30-vs-ZNF57-205.alignment counts-znf_b1h_alignment/ZNF57-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF57-205/pos_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_counts_pattern_7.n_28-vs-ZNF57-205.alignment counts-znf_b1h_alignment/ZNF57-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF57-205/pos_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_counts_pattern_8.n_24-vs-ZNF57-205.alignment counts-znf_b1h_alignment/ZNF57-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF57-205/pos_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_counts_pattern_9.n_22-vs-ZNF57-205.alignment counts-znf_b1h_alignment/ZNF57-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF572-201/neg_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_counts_pattern_0.n_515-vs-ZNF572-201.alignment counts-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF572-201/neg_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_counts_pattern_10.n_34-vs-ZNF572-201.alignment counts-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF572-201/neg_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_counts_pattern_11.n_32-vs-ZNF572-201.alignment counts-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF572-201/neg_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_counts_pattern_12.n_29-vs-ZNF572-201.alignment counts-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF572-201/neg_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_counts_pattern_13.n_27-vs-ZNF572-201.alignment counts-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF572-201/neg_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_counts_pattern_14.n_21-vs-ZNF572-201.alignment counts-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF572-201/neg_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_counts_pattern_15.n_20-vs-ZNF572-201.alignment counts-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF572-201/neg_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_counts_pattern_1.n_284-vs-ZNF572-201.alignment counts-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF572-201/neg_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_counts_pattern_2.n_120-vs-ZNF572-201.alignment counts-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF572-201/neg_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_counts_pattern_3.n_108-vs-ZNF572-201.alignment counts-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF572-201/neg_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_counts_pattern_4.n_59-vs-ZNF572-201.alignment counts-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF572-201/neg_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_counts_pattern_5.n_57-vs-ZNF572-201.alignment counts-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF572-201/neg_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_counts_pattern_6.n_47-vs-ZNF572-201.alignment counts-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF572-201/neg_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_counts_pattern_7.n_39-vs-ZNF572-201.alignment counts-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF572-201/neg_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_counts_pattern_8.n_35-vs-ZNF572-201.alignment counts-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF572-201/neg_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_counts_pattern_9.n_35-vs-ZNF572-201.alignment counts-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF572-201/pos_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_counts_pattern_0.n_1073-vs-ZNF572-201.alignment counts-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF572-201/pos_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_counts_pattern_10.n_166-vs-ZNF572-201.alignment counts-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF572-201/pos_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_counts_pattern_11.n_130-vs-ZNF572-201.alignment counts-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF572-201/pos_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_counts_pattern_12.n_84-vs-ZNF572-201.alignment counts-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF572-201/pos_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_counts_pattern_13.n_49-vs-ZNF572-201.alignment counts-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF572-201/pos_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_counts_pattern_14.n_45-vs-ZNF572-201.alignment counts-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF572-201/pos_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_counts_pattern_15.n_44-vs-ZNF572-201.alignment counts-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF572-201/pos_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_counts_pattern_16.n_44-vs-ZNF572-201.alignment counts-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF572-201/pos_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_counts_pattern_17.n_38-vs-ZNF572-201.alignment counts-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF572-201/pos_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_counts_pattern_18.n_23-vs-ZNF572-201.alignment counts-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF572-201/pos_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_counts_pattern_1.n_976-vs-ZNF572-201.alignment counts-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF572-201/pos_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_counts_pattern_2.n_856-vs-ZNF572-201.alignment counts-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF572-201/pos_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_counts_pattern_3.n_590-vs-ZNF572-201.alignment counts-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF572-201/pos_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_counts_pattern_4.n_430-vs-ZNF572-201.alignment counts-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF572-201/pos_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_counts_pattern_5.n_297-vs-ZNF572-201.alignment counts-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF572-201/pos_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_counts_pattern_6.n_289-vs-ZNF572-201.alignment counts-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF572-201/pos_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_counts_pattern_7.n_232-vs-ZNF572-201.alignment counts-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF572-201/pos_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_counts_pattern_8.n_205-vs-ZNF572-201.alignment counts-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF572-201/pos_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_counts_pattern_9.n_191-vs-ZNF572-201.alignment counts-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF573-201/ChipExo_models_ZNF573_counts-pos.pattern_0.n_1465-vs-ZNF573-201.alignment counts-znf_b1h_alignment/ZNF573-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF573-201/ChipExo_models_ZNF573_counts-pos.pattern_1.n_27-vs-ZNF573-201.alignment counts-znf_b1h_alignment/ZNF573-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/Hughes_GR_models_ZNF574_counts-pos.pattern_0.n_1250-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/Hughes_GR_models_ZNF574_counts-pos.pattern_1.n_961-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/Hughes_GR_models_ZNF574_counts-pos.pattern_2.n_926-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/Hughes_GR_models_ZNF574_counts-pos.pattern_3.n_383-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/Hughes_GR_models_ZNF574_counts-pos.pattern_4.n_209-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/Hughes_GR_models_ZNF574_counts-pos.pattern_5.n_199-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/Hughes_GR_models_ZNF574_counts-pos.pattern_6.n_31-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/Hughes_GR_models_ZNF574_counts-pos.pattern_7.n_20-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/Hughes_NB_models_ZNF574_counts-pos.pattern_0.n_935-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/Hughes_NB_models_ZNF574_counts-pos.pattern_1.n_788-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/Hughes_NB_models_ZNF574_counts-pos.pattern_2.n_468-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/Hughes_NB_models_ZNF574_counts-pos.pattern_3.n_355-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/Hughes_NB_models_ZNF574_counts-pos.pattern_4.n_99-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/Hughes_NB_models_ZNF574_counts-pos.pattern_5.n_33-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/Hughes_NB_models_ZNF574_counts-pos.pattern_6.n_30-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR402JAC_ChIP_ZNF574_MCF-7_ENCSR631TCZ_counts_pattern_0.n_542-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR402JAC_ChIP_ZNF574_MCF-7_ENCSR631TCZ_counts_pattern_10.n_59-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR402JAC_ChIP_ZNF574_MCF-7_ENCSR631TCZ_counts_pattern_11.n_58-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR402JAC_ChIP_ZNF574_MCF-7_ENCSR631TCZ_counts_pattern_12.n_47-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR402JAC_ChIP_ZNF574_MCF-7_ENCSR631TCZ_counts_pattern_13.n_40-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR402JAC_ChIP_ZNF574_MCF-7_ENCSR631TCZ_counts_pattern_14.n_21-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR402JAC_ChIP_ZNF574_MCF-7_ENCSR631TCZ_counts_pattern_1.n_393-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR402JAC_ChIP_ZNF574_MCF-7_ENCSR631TCZ_counts_pattern_2.n_192-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR402JAC_ChIP_ZNF574_MCF-7_ENCSR631TCZ_counts_pattern_3.n_133-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR402JAC_ChIP_ZNF574_MCF-7_ENCSR631TCZ_counts_pattern_4.n_123-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR402JAC_ChIP_ZNF574_MCF-7_ENCSR631TCZ_counts_pattern_5.n_115-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR402JAC_ChIP_ZNF574_MCF-7_ENCSR631TCZ_counts_pattern_6.n_112-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR402JAC_ChIP_ZNF574_MCF-7_ENCSR631TCZ_counts_pattern_7.n_105-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR402JAC_ChIP_ZNF574_MCF-7_ENCSR631TCZ_counts_pattern_8.n_77-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR402JAC_ChIP_ZNF574_MCF-7_ENCSR631TCZ_counts_pattern_9.n_64-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_counts_pattern_0.n_3530-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_counts_pattern_10.n_86-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_counts_pattern_11.n_80-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_counts_pattern_12.n_66-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_counts_pattern_13.n_40-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_counts_pattern_14.n_20-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_counts_pattern_1.n_3198-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_counts_pattern_2.n_2875-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_counts_pattern_3.n_2020-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_counts_pattern_4.n_881-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_counts_pattern_5.n_589-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_counts_pattern_6.n_359-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_counts_pattern_7.n_145-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_counts_pattern_8.n_131-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_counts_pattern_9.n_126-vs-ZNF574-201.alignment counts-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF576-201/pos_patterns.ENCSR253HUM_ChIP_ZNF576_HepG2_ENCSR204JXG_counts_pattern_0.n_957-vs-ZNF576-201.alignment counts-znf_b1h_alignment/ZNF576-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF576-201/pos_patterns.ENCSR253HUM_ChIP_ZNF576_HepG2_ENCSR204JXG_counts_pattern_1.n_908-vs-ZNF576-201.alignment counts-znf_b1h_alignment/ZNF576-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF576-201/pos_patterns.ENCSR253HUM_ChIP_ZNF576_HepG2_ENCSR204JXG_counts_pattern_2.n_899-vs-ZNF576-201.alignment counts-znf_b1h_alignment/ZNF576-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF576-201/pos_patterns.ENCSR253HUM_ChIP_ZNF576_HepG2_ENCSR204JXG_counts_pattern_3.n_569-vs-ZNF576-201.alignment counts-znf_b1h_alignment/ZNF576-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF576-201/pos_patterns.ENCSR253HUM_ChIP_ZNF576_HepG2_ENCSR204JXG_counts_pattern_4.n_568-vs-ZNF576-201.alignment counts-znf_b1h_alignment/ZNF576-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF576-201/pos_patterns.ENCSR253HUM_ChIP_ZNF576_HepG2_ENCSR204JXG_counts_pattern_5.n_87-vs-ZNF576-201.alignment counts-znf_b1h_alignment/ZNF576-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF576-201/pos_patterns.ENCSR253HUM_ChIP_ZNF576_HepG2_ENCSR204JXG_counts_pattern_6.n_83-vs-ZNF576-201.alignment counts-znf_b1h_alignment/ZNF576-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF577-201/pos_patterns.ENCSR436RQS_ChIP_ZNF577_HepG2_ENCSR522KLB_counts_pattern_0.n_565-vs-ZNF577-201.alignment counts-znf_b1h_alignment/ZNF577-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF577-201/pos_patterns.ENCSR436RQS_ChIP_ZNF577_HepG2_ENCSR522KLB_counts_pattern_10.n_50-vs-ZNF577-201.alignment counts-znf_b1h_alignment/ZNF577-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF577-201/pos_patterns.ENCSR436RQS_ChIP_ZNF577_HepG2_ENCSR522KLB_counts_pattern_11.n_49-vs-ZNF577-201.alignment counts-znf_b1h_alignment/ZNF577-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF577-201/pos_patterns.ENCSR436RQS_ChIP_ZNF577_HepG2_ENCSR522KLB_counts_pattern_12.n_47-vs-ZNF577-201.alignment counts-znf_b1h_alignment/ZNF577-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF577-201/pos_patterns.ENCSR436RQS_ChIP_ZNF577_HepG2_ENCSR522KLB_counts_pattern_13.n_40-vs-ZNF577-201.alignment counts-znf_b1h_alignment/ZNF577-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF577-201/pos_patterns.ENCSR436RQS_ChIP_ZNF577_HepG2_ENCSR522KLB_counts_pattern_14.n_29-vs-ZNF577-201.alignment counts-znf_b1h_alignment/ZNF577-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF577-201/pos_patterns.ENCSR436RQS_ChIP_ZNF577_HepG2_ENCSR522KLB_counts_pattern_1.n_371-vs-ZNF577-201.alignment counts-znf_b1h_alignment/ZNF577-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF577-201/pos_patterns.ENCSR436RQS_ChIP_ZNF577_HepG2_ENCSR522KLB_counts_pattern_2.n_332-vs-ZNF577-201.alignment counts-znf_b1h_alignment/ZNF577-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF577-201/pos_patterns.ENCSR436RQS_ChIP_ZNF577_HepG2_ENCSR522KLB_counts_pattern_3.n_158-vs-ZNF577-201.alignment counts-znf_b1h_alignment/ZNF577-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF577-201/pos_patterns.ENCSR436RQS_ChIP_ZNF577_HepG2_ENCSR522KLB_counts_pattern_4.n_92-vs-ZNF577-201.alignment counts-znf_b1h_alignment/ZNF577-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF577-201/pos_patterns.ENCSR436RQS_ChIP_ZNF577_HepG2_ENCSR522KLB_counts_pattern_5.n_87-vs-ZNF577-201.alignment counts-znf_b1h_alignment/ZNF577-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF577-201/pos_patterns.ENCSR436RQS_ChIP_ZNF577_HepG2_ENCSR522KLB_counts_pattern_6.n_60-vs-ZNF577-201.alignment counts-znf_b1h_alignment/ZNF577-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF577-201/pos_patterns.ENCSR436RQS_ChIP_ZNF577_HepG2_ENCSR522KLB_counts_pattern_7.n_59-vs-ZNF577-201.alignment counts-znf_b1h_alignment/ZNF577-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF577-201/pos_patterns.ENCSR436RQS_ChIP_ZNF577_HepG2_ENCSR522KLB_counts_pattern_8.n_53-vs-ZNF577-201.alignment counts-znf_b1h_alignment/ZNF577-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF577-201/pos_patterns.ENCSR436RQS_ChIP_ZNF577_HepG2_ENCSR522KLB_counts_pattern_9.n_52-vs-ZNF577-201.alignment counts-znf_b1h_alignment/ZNF577-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR173CTF_ChIP_ZNF580_HepG2_ENCSR480SUL_counts_pattern_0.n_3242-vs-ZNF580-201.alignment counts-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR173CTF_ChIP_ZNF580_HepG2_ENCSR480SUL_counts_pattern_10.n_235-vs-ZNF580-201.alignment counts-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR173CTF_ChIP_ZNF580_HepG2_ENCSR480SUL_counts_pattern_11.n_222-vs-ZNF580-201.alignment counts-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR173CTF_ChIP_ZNF580_HepG2_ENCSR480SUL_counts_pattern_12.n_184-vs-ZNF580-201.alignment counts-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR173CTF_ChIP_ZNF580_HepG2_ENCSR480SUL_counts_pattern_13.n_183-vs-ZNF580-201.alignment counts-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR173CTF_ChIP_ZNF580_HepG2_ENCSR480SUL_counts_pattern_14.n_164-vs-ZNF580-201.alignment counts-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR173CTF_ChIP_ZNF580_HepG2_ENCSR480SUL_counts_pattern_15.n_155-vs-ZNF580-201.alignment counts-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR173CTF_ChIP_ZNF580_HepG2_ENCSR480SUL_counts_pattern_16.n_56-vs-ZNF580-201.alignment counts-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR173CTF_ChIP_ZNF580_HepG2_ENCSR480SUL_counts_pattern_17.n_49-vs-ZNF580-201.alignment counts-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR173CTF_ChIP_ZNF580_HepG2_ENCSR480SUL_counts_pattern_1.n_3101-vs-ZNF580-201.alignment counts-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR173CTF_ChIP_ZNF580_HepG2_ENCSR480SUL_counts_pattern_2.n_2928-vs-ZNF580-201.alignment counts-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR173CTF_ChIP_ZNF580_HepG2_ENCSR480SUL_counts_pattern_3.n_1378-vs-ZNF580-201.alignment counts-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR173CTF_ChIP_ZNF580_HepG2_ENCSR480SUL_counts_pattern_4.n_804-vs-ZNF580-201.alignment counts-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR173CTF_ChIP_ZNF580_HepG2_ENCSR480SUL_counts_pattern_5.n_675-vs-ZNF580-201.alignment counts-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR173CTF_ChIP_ZNF580_HepG2_ENCSR480SUL_counts_pattern_6.n_529-vs-ZNF580-201.alignment counts-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR173CTF_ChIP_ZNF580_HepG2_ENCSR480SUL_counts_pattern_7.n_397-vs-ZNF580-201.alignment counts-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR173CTF_ChIP_ZNF580_HepG2_ENCSR480SUL_counts_pattern_8.n_297-vs-ZNF580-201.alignment counts-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR173CTF_ChIP_ZNF580_HepG2_ENCSR480SUL_counts_pattern_9.n_296-vs-ZNF580-201.alignment counts-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR668HOP_ChIP_ZNF580_HEK293_ENCSR959CUQ_counts_pattern_0.n_3236-vs-ZNF580-201.alignment counts-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR668HOP_ChIP_ZNF580_HEK293_ENCSR959CUQ_counts_pattern_10.n_98-vs-ZNF580-201.alignment counts-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR668HOP_ChIP_ZNF580_HEK293_ENCSR959CUQ_counts_pattern_11.n_84-vs-ZNF580-201.alignment counts-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR668HOP_ChIP_ZNF580_HEK293_ENCSR959CUQ_counts_pattern_12.n_60-vs-ZNF580-201.alignment counts-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR668HOP_ChIP_ZNF580_HEK293_ENCSR959CUQ_counts_pattern_13.n_59-vs-ZNF580-201.alignment counts-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR668HOP_ChIP_ZNF580_HEK293_ENCSR959CUQ_counts_pattern_14.n_50-vs-ZNF580-201.alignment counts-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR668HOP_ChIP_ZNF580_HEK293_ENCSR959CUQ_counts_pattern_15.n_37-vs-ZNF580-201.alignment counts-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR668HOP_ChIP_ZNF580_HEK293_ENCSR959CUQ_counts_pattern_16.n_33-vs-ZNF580-201.alignment counts-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR668HOP_ChIP_ZNF580_HEK293_ENCSR959CUQ_counts_pattern_17.n_23-vs-ZNF580-201.alignment counts-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR668HOP_ChIP_ZNF580_HEK293_ENCSR959CUQ_counts_pattern_1.n_2667-vs-ZNF580-201.alignment counts-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR668HOP_ChIP_ZNF580_HEK293_ENCSR959CUQ_counts_pattern_2.n_834-vs-ZNF580-201.alignment counts-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR668HOP_ChIP_ZNF580_HEK293_ENCSR959CUQ_counts_pattern_3.n_760-vs-ZNF580-201.alignment counts-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR668HOP_ChIP_ZNF580_HEK293_ENCSR959CUQ_counts_pattern_4.n_673-vs-ZNF580-201.alignment counts-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR668HOP_ChIP_ZNF580_HEK293_ENCSR959CUQ_counts_pattern_5.n_649-vs-ZNF580-201.alignment counts-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR668HOP_ChIP_ZNF580_HEK293_ENCSR959CUQ_counts_pattern_6.n_583-vs-ZNF580-201.alignment counts-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR668HOP_ChIP_ZNF580_HEK293_ENCSR959CUQ_counts_pattern_7.n_518-vs-ZNF580-201.alignment counts-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR668HOP_ChIP_ZNF580_HEK293_ENCSR959CUQ_counts_pattern_8.n_242-vs-ZNF580-201.alignment counts-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR668HOP_ChIP_ZNF580_HEK293_ENCSR959CUQ_counts_pattern_9.n_115-vs-ZNF580-201.alignment counts-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF582-201/ChipExo_models_ZNF582_counts-pos.pattern_0.n_309-vs-ZNF582-201.alignment counts-znf_b1h_alignment/ZNF582-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF582-201/Hughes_GR_models_ZNF582_counts-pos.pattern_0.n_350-vs-ZNF582-201.alignment counts-znf_b1h_alignment/ZNF582-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-201/neg_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_0.n_369-vs-ZNF583-201.alignment counts-znf_b1h_alignment/ZNF583-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-201/neg_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_10.n_22-vs-ZNF583-201.alignment counts-znf_b1h_alignment/ZNF583-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-201/neg_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_11.n_21-vs-ZNF583-201.alignment counts-znf_b1h_alignment/ZNF583-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-201/neg_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_12.n_20-vs-ZNF583-201.alignment counts-znf_b1h_alignment/ZNF583-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-201/neg_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_1.n_132-vs-ZNF583-201.alignment counts-znf_b1h_alignment/ZNF583-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-201/neg_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_2.n_108-vs-ZNF583-201.alignment counts-znf_b1h_alignment/ZNF583-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-201/neg_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_3.n_94-vs-ZNF583-201.alignment counts-znf_b1h_alignment/ZNF583-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-201/neg_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_4.n_62-vs-ZNF583-201.alignment counts-znf_b1h_alignment/ZNF583-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-201/neg_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_5.n_58-vs-ZNF583-201.alignment counts-znf_b1h_alignment/ZNF583-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-201/neg_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_6.n_51-vs-ZNF583-201.alignment counts-znf_b1h_alignment/ZNF583-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-201/neg_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_7.n_47-vs-ZNF583-201.alignment counts-znf_b1h_alignment/ZNF583-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-201/neg_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_8.n_42-vs-ZNF583-201.alignment counts-znf_b1h_alignment/ZNF583-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-201/neg_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_9.n_26-vs-ZNF583-201.alignment counts-znf_b1h_alignment/ZNF583-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-201/pos_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_0.n_2078-vs-ZNF583-201.alignment counts-znf_b1h_alignment/ZNF583-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-201/pos_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_10.n_82-vs-ZNF583-201.alignment counts-znf_b1h_alignment/ZNF583-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-201/pos_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_11.n_72-vs-ZNF583-201.alignment counts-znf_b1h_alignment/ZNF583-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-201/pos_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_12.n_62-vs-ZNF583-201.alignment counts-znf_b1h_alignment/ZNF583-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-201/pos_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_13.n_52-vs-ZNF583-201.alignment counts-znf_b1h_alignment/ZNF583-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-201/pos_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_14.n_40-vs-ZNF583-201.alignment counts-znf_b1h_alignment/ZNF583-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-201/pos_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_15.n_30-vs-ZNF583-201.alignment counts-znf_b1h_alignment/ZNF583-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-201/pos_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_1.n_1151-vs-ZNF583-201.alignment counts-znf_b1h_alignment/ZNF583-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-201/pos_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_2.n_675-vs-ZNF583-201.alignment counts-znf_b1h_alignment/ZNF583-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-201/pos_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_3.n_198-vs-ZNF583-201.alignment counts-znf_b1h_alignment/ZNF583-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-201/pos_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_4.n_192-vs-ZNF583-201.alignment counts-znf_b1h_alignment/ZNF583-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-201/pos_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_5.n_184-vs-ZNF583-201.alignment counts-znf_b1h_alignment/ZNF583-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-201/pos_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_6.n_146-vs-ZNF583-201.alignment counts-znf_b1h_alignment/ZNF583-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-201/pos_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_7.n_133-vs-ZNF583-201.alignment counts-znf_b1h_alignment/ZNF583-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-201/pos_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_8.n_115-vs-ZNF583-201.alignment counts-znf_b1h_alignment/ZNF583-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-201/pos_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_9.n_102-vs-ZNF583-201.alignment counts-znf_b1h_alignment/ZNF583-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-207/neg_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_0.n_369-vs-ZNF583-207.alignment counts-znf_b1h_alignment/ZNF583-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-207/neg_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_10.n_22-vs-ZNF583-207.alignment counts-znf_b1h_alignment/ZNF583-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-207/neg_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_11.n_21-vs-ZNF583-207.alignment counts-znf_b1h_alignment/ZNF583-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-207/neg_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_12.n_20-vs-ZNF583-207.alignment counts-znf_b1h_alignment/ZNF583-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-207/neg_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_1.n_132-vs-ZNF583-207.alignment counts-znf_b1h_alignment/ZNF583-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-207/neg_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_2.n_108-vs-ZNF583-207.alignment counts-znf_b1h_alignment/ZNF583-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-207/neg_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_3.n_94-vs-ZNF583-207.alignment counts-znf_b1h_alignment/ZNF583-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-207/neg_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_4.n_62-vs-ZNF583-207.alignment counts-znf_b1h_alignment/ZNF583-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-207/neg_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_5.n_58-vs-ZNF583-207.alignment counts-znf_b1h_alignment/ZNF583-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-207/neg_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_6.n_51-vs-ZNF583-207.alignment counts-znf_b1h_alignment/ZNF583-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-207/neg_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_7.n_47-vs-ZNF583-207.alignment counts-znf_b1h_alignment/ZNF583-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-207/neg_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_8.n_42-vs-ZNF583-207.alignment counts-znf_b1h_alignment/ZNF583-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-207/neg_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_9.n_26-vs-ZNF583-207.alignment counts-znf_b1h_alignment/ZNF583-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-207/pos_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_0.n_2078-vs-ZNF583-207.alignment counts-znf_b1h_alignment/ZNF583-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-207/pos_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_10.n_82-vs-ZNF583-207.alignment counts-znf_b1h_alignment/ZNF583-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-207/pos_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_11.n_72-vs-ZNF583-207.alignment counts-znf_b1h_alignment/ZNF583-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-207/pos_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_12.n_62-vs-ZNF583-207.alignment counts-znf_b1h_alignment/ZNF583-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-207/pos_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_13.n_52-vs-ZNF583-207.alignment counts-znf_b1h_alignment/ZNF583-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-207/pos_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_14.n_40-vs-ZNF583-207.alignment counts-znf_b1h_alignment/ZNF583-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-207/pos_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_15.n_30-vs-ZNF583-207.alignment counts-znf_b1h_alignment/ZNF583-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-207/pos_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_1.n_1151-vs-ZNF583-207.alignment counts-znf_b1h_alignment/ZNF583-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-207/pos_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_2.n_675-vs-ZNF583-207.alignment counts-znf_b1h_alignment/ZNF583-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-207/pos_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_3.n_198-vs-ZNF583-207.alignment counts-znf_b1h_alignment/ZNF583-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-207/pos_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_4.n_192-vs-ZNF583-207.alignment counts-znf_b1h_alignment/ZNF583-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-207/pos_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_5.n_184-vs-ZNF583-207.alignment counts-znf_b1h_alignment/ZNF583-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-207/pos_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_6.n_146-vs-ZNF583-207.alignment counts-znf_b1h_alignment/ZNF583-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-207/pos_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_7.n_133-vs-ZNF583-207.alignment counts-znf_b1h_alignment/ZNF583-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-207/pos_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_8.n_115-vs-ZNF583-207.alignment counts-znf_b1h_alignment/ZNF583-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF583-207/pos_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_counts_pattern_9.n_102-vs-ZNF583-207.alignment counts-znf_b1h_alignment/ZNF583-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF584-201/ChipExo_models_ZNF584_counts-pos.pattern_0.n_351-vs-ZNF584-201.alignment counts-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF584-201/ChipExo_models_ZNF584_counts-pos.pattern_1.n_22-vs-ZNF584-201.alignment counts-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF584-201/neg_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_counts_pattern_0.n_32-vs-ZNF584-201.alignment counts-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF584-201/neg_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_counts_pattern_1.n_27-vs-ZNF584-201.alignment counts-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF584-201/pos_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_counts_pattern_0.n_3257-vs-ZNF584-201.alignment counts-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF584-201/pos_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_counts_pattern_10.n_44-vs-ZNF584-201.alignment counts-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF584-201/pos_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_counts_pattern_11.n_39-vs-ZNF584-201.alignment counts-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF584-201/pos_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_counts_pattern_12.n_28-vs-ZNF584-201.alignment counts-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF584-201/pos_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_counts_pattern_13.n_25-vs-ZNF584-201.alignment counts-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF584-201/pos_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_counts_pattern_14.n_23-vs-ZNF584-201.alignment counts-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF584-201/pos_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_counts_pattern_15.n_22-vs-ZNF584-201.alignment counts-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF584-201/pos_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_counts_pattern_1.n_2297-vs-ZNF584-201.alignment counts-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF584-201/pos_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_counts_pattern_2.n_2079-vs-ZNF584-201.alignment counts-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF584-201/pos_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_counts_pattern_3.n_1478-vs-ZNF584-201.alignment counts-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF584-201/pos_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_counts_pattern_4.n_551-vs-ZNF584-201.alignment counts-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF584-201/pos_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_counts_pattern_5.n_274-vs-ZNF584-201.alignment counts-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF584-201/pos_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_counts_pattern_6.n_186-vs-ZNF584-201.alignment counts-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF584-201/pos_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_counts_pattern_7.n_109-vs-ZNF584-201.alignment counts-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF584-201/pos_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_counts_pattern_8.n_60-vs-ZNF584-201.alignment counts-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF584-201/pos_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_counts_pattern_9.n_51-vs-ZNF584-201.alignment counts-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF585A-201/ChipExo_models_ZNF585A_counts-pos.pattern_0.n_2840-vs-ZNF585A-201.alignment counts-znf_b1h_alignment/ZNF585A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF585A-201/ChipExo_models_ZNF585A_counts-pos.pattern_1.n_478-vs-ZNF585A-201.alignment counts-znf_b1h_alignment/ZNF585A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF585A-201/ChipExo_models_ZNF585A_counts-pos.pattern_2.n_74-vs-ZNF585A-201.alignment counts-znf_b1h_alignment/ZNF585A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF585B-205/pos_patterns.ENCSR011XCI_ChIP_ZNF585B_HEK293_ENCSR206HFO_counts_pattern_0.n_5379-vs-ZNF585B-205.alignment counts-znf_b1h_alignment/ZNF585B-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF585B-205/pos_patterns.ENCSR011XCI_ChIP_ZNF585B_HEK293_ENCSR206HFO_counts_pattern_1.n_1082-vs-ZNF585B-205.alignment counts-znf_b1h_alignment/ZNF585B-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF585B-205/pos_patterns.ENCSR011XCI_ChIP_ZNF585B_HEK293_ENCSR206HFO_counts_pattern_2.n_159-vs-ZNF585B-205.alignment counts-znf_b1h_alignment/ZNF585B-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF585B-205/pos_patterns.ENCSR011XCI_ChIP_ZNF585B_HEK293_ENCSR206HFO_counts_pattern_3.n_39-vs-ZNF585B-205.alignment counts-znf_b1h_alignment/ZNF585B-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF585B-205/pos_patterns.ENCSR011XCI_ChIP_ZNF585B_HEK293_ENCSR206HFO_counts_pattern_4.n_20-vs-ZNF585B-205.alignment counts-znf_b1h_alignment/ZNF585B-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF586-201/Hughes_GR_models_ZNF586_counts-pos.pattern_0.n_3321-vs-ZNF586-201.alignment counts-znf_b1h_alignment/ZNF586-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF586-201/Hughes_GR_models_ZNF586_counts-pos.pattern_1.n_582-vs-ZNF586-201.alignment counts-znf_b1h_alignment/ZNF586-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF586-201/pos_patterns.ENCSR236JZN_ChIP_ZNF586_K562_ENCSR577XPU_counts_pattern_0.n_339-vs-ZNF586-201.alignment counts-znf_b1h_alignment/ZNF586-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF586-201/pos_patterns.ENCSR236JZN_ChIP_ZNF586_K562_ENCSR577XPU_counts_pattern_1.n_95-vs-ZNF586-201.alignment counts-znf_b1h_alignment/ZNF586-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF586-201/pos_patterns.ENCSR236JZN_ChIP_ZNF586_K562_ENCSR577XPU_counts_pattern_2.n_70-vs-ZNF586-201.alignment counts-znf_b1h_alignment/ZNF586-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF586-201/pos_patterns.ENCSR236JZN_ChIP_ZNF586_K562_ENCSR577XPU_counts_pattern_3.n_45-vs-ZNF586-201.alignment counts-znf_b1h_alignment/ZNF586-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF586-201/pos_patterns.ENCSR236JZN_ChIP_ZNF586_K562_ENCSR577XPU_counts_pattern_4.n_39-vs-ZNF586-201.alignment counts-znf_b1h_alignment/ZNF586-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF586-201/pos_patterns.ENCSR236JZN_ChIP_ZNF586_K562_ENCSR577XPU_counts_pattern_5.n_32-vs-ZNF586-201.alignment counts-znf_b1h_alignment/ZNF586-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF586-201/pos_patterns.ENCSR236JZN_ChIP_ZNF586_K562_ENCSR577XPU_counts_pattern_6.n_29-vs-ZNF586-201.alignment counts-znf_b1h_alignment/ZNF586-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF587-201/ChipExo_models_ZNF587_counts-pos.pattern_0.n_375-vs-ZNF587-201.alignment counts-znf_b1h_alignment/ZNF587-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF589-201/neg_patterns.ENCSR603XLW_ChIP_ZNF589_K562_ENCSR441ZYV_counts_pattern_0.n_27-vs-ZNF589-201.alignment counts-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF589-201/neg_patterns.ENCSR603XLW_ChIP_ZNF589_K562_ENCSR441ZYV_counts_pattern_1.n_22-vs-ZNF589-201.alignment counts-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR603XLW_ChIP_ZNF589_K562_ENCSR441ZYV_counts_pattern_0.n_5376-vs-ZNF589-201.alignment counts-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR603XLW_ChIP_ZNF589_K562_ENCSR441ZYV_counts_pattern_10.n_80-vs-ZNF589-201.alignment counts-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR603XLW_ChIP_ZNF589_K562_ENCSR441ZYV_counts_pattern_11.n_55-vs-ZNF589-201.alignment counts-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR603XLW_ChIP_ZNF589_K562_ENCSR441ZYV_counts_pattern_1.n_3460-vs-ZNF589-201.alignment counts-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR603XLW_ChIP_ZNF589_K562_ENCSR441ZYV_counts_pattern_2.n_2813-vs-ZNF589-201.alignment counts-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR603XLW_ChIP_ZNF589_K562_ENCSR441ZYV_counts_pattern_3.n_1422-vs-ZNF589-201.alignment counts-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR603XLW_ChIP_ZNF589_K562_ENCSR441ZYV_counts_pattern_4.n_762-vs-ZNF589-201.alignment counts-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR603XLW_ChIP_ZNF589_K562_ENCSR441ZYV_counts_pattern_5.n_724-vs-ZNF589-201.alignment counts-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR603XLW_ChIP_ZNF589_K562_ENCSR441ZYV_counts_pattern_6.n_447-vs-ZNF589-201.alignment counts-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR603XLW_ChIP_ZNF589_K562_ENCSR441ZYV_counts_pattern_7.n_291-vs-ZNF589-201.alignment counts-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR603XLW_ChIP_ZNF589_K562_ENCSR441ZYV_counts_pattern_8.n_100-vs-ZNF589-201.alignment counts-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR603XLW_ChIP_ZNF589_K562_ENCSR441ZYV_counts_pattern_9.n_95-vs-ZNF589-201.alignment counts-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR827ZGB_ChIP_ZNF589_HepG2_ENCSR857FTR_counts_pattern_0.n_3919-vs-ZNF589-201.alignment counts-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR827ZGB_ChIP_ZNF589_HepG2_ENCSR857FTR_counts_pattern_10.n_123-vs-ZNF589-201.alignment counts-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR827ZGB_ChIP_ZNF589_HepG2_ENCSR857FTR_counts_pattern_11.n_121-vs-ZNF589-201.alignment counts-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR827ZGB_ChIP_ZNF589_HepG2_ENCSR857FTR_counts_pattern_12.n_89-vs-ZNF589-201.alignment counts-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR827ZGB_ChIP_ZNF589_HepG2_ENCSR857FTR_counts_pattern_13.n_87-vs-ZNF589-201.alignment counts-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR827ZGB_ChIP_ZNF589_HepG2_ENCSR857FTR_counts_pattern_14.n_58-vs-ZNF589-201.alignment counts-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR827ZGB_ChIP_ZNF589_HepG2_ENCSR857FTR_counts_pattern_15.n_44-vs-ZNF589-201.alignment counts-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR827ZGB_ChIP_ZNF589_HepG2_ENCSR857FTR_counts_pattern_16.n_41-vs-ZNF589-201.alignment counts-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR827ZGB_ChIP_ZNF589_HepG2_ENCSR857FTR_counts_pattern_17.n_38-vs-ZNF589-201.alignment counts-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR827ZGB_ChIP_ZNF589_HepG2_ENCSR857FTR_counts_pattern_18.n_37-vs-ZNF589-201.alignment counts-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR827ZGB_ChIP_ZNF589_HepG2_ENCSR857FTR_counts_pattern_19.n_30-vs-ZNF589-201.alignment counts-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR827ZGB_ChIP_ZNF589_HepG2_ENCSR857FTR_counts_pattern_1.n_929-vs-ZNF589-201.alignment counts-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR827ZGB_ChIP_ZNF589_HepG2_ENCSR857FTR_counts_pattern_2.n_663-vs-ZNF589-201.alignment counts-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR827ZGB_ChIP_ZNF589_HepG2_ENCSR857FTR_counts_pattern_3.n_288-vs-ZNF589-201.alignment counts-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR827ZGB_ChIP_ZNF589_HepG2_ENCSR857FTR_counts_pattern_4.n_280-vs-ZNF589-201.alignment counts-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR827ZGB_ChIP_ZNF589_HepG2_ENCSR857FTR_counts_pattern_5.n_271-vs-ZNF589-201.alignment counts-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR827ZGB_ChIP_ZNF589_HepG2_ENCSR857FTR_counts_pattern_6.n_253-vs-ZNF589-201.alignment counts-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR827ZGB_ChIP_ZNF589_HepG2_ENCSR857FTR_counts_pattern_7.n_212-vs-ZNF589-201.alignment counts-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR827ZGB_ChIP_ZNF589_HepG2_ENCSR857FTR_counts_pattern_8.n_212-vs-ZNF589-201.alignment counts-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR827ZGB_ChIP_ZNF589_HepG2_ENCSR857FTR_counts_pattern_9.n_146-vs-ZNF589-201.alignment counts-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF592-201/neg_patterns.ENCSR028NUR_ChIP_ZNF592_MCF-7_ENCSR216OCY_counts_pattern_0.n_48-vs-ZNF592-201.alignment counts-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF592-201/neg_patterns.ENCSR028NUR_ChIP_ZNF592_MCF-7_ENCSR216OCY_counts_pattern_1.n_36-vs-ZNF592-201.alignment counts-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF592-201/neg_patterns.ENCSR028NUR_ChIP_ZNF592_MCF-7_ENCSR216OCY_counts_pattern_2.n_35-vs-ZNF592-201.alignment counts-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF592-201/neg_patterns.ENCSR028NUR_ChIP_ZNF592_MCF-7_ENCSR216OCY_counts_pattern_3.n_24-vs-ZNF592-201.alignment counts-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF592-201/neg_patterns.ENCSR028NUR_ChIP_ZNF592_MCF-7_ENCSR216OCY_counts_pattern_4.n_23-vs-ZNF592-201.alignment counts-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF592-201/neg_patterns.ENCSR028NUR_ChIP_ZNF592_MCF-7_ENCSR216OCY_counts_pattern_5.n_21-vs-ZNF592-201.alignment counts-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF592-201/neg_patterns.ENCSR028NUR_ChIP_ZNF592_MCF-7_ENCSR216OCY_counts_pattern_6.n_20-vs-ZNF592-201.alignment counts-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF592-201/neg_patterns.ENCSR028NUR_ChIP_ZNF592_MCF-7_ENCSR216OCY_counts_pattern_7.n_19-vs-ZNF592-201.alignment counts-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF592-201/neg_patterns.ENCSR173ZVL_ChIP_ZNF592_GM12878_ENCSR341OZX_counts_pattern_0.n_65-vs-ZNF592-201.alignment counts-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR028NUR_ChIP_ZNF592_MCF-7_ENCSR216OCY_counts_pattern_0.n_153-vs-ZNF592-201.alignment counts-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR028NUR_ChIP_ZNF592_MCF-7_ENCSR216OCY_counts_pattern_1.n_85-vs-ZNF592-201.alignment counts-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR173ZVL_ChIP_ZNF592_GM12878_ENCSR341OZX_counts_pattern_0.n_2167-vs-ZNF592-201.alignment counts-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR173ZVL_ChIP_ZNF592_GM12878_ENCSR341OZX_counts_pattern_1.n_1249-vs-ZNF592-201.alignment counts-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR173ZVL_ChIP_ZNF592_GM12878_ENCSR341OZX_counts_pattern_2.n_1133-vs-ZNF592-201.alignment counts-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR173ZVL_ChIP_ZNF592_GM12878_ENCSR341OZX_counts_pattern_3.n_80-vs-ZNF592-201.alignment counts-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR173ZVL_ChIP_ZNF592_GM12878_ENCSR341OZX_counts_pattern_4.n_22-vs-ZNF592-201.alignment counts-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR249BHQ_ChIP_ZNF592_K562_ENCSR949XNE_counts_pattern_0.n_6379-vs-ZNF592-201.alignment counts-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR249BHQ_ChIP_ZNF592_K562_ENCSR949XNE_counts_pattern_1.n_3883-vs-ZNF592-201.alignment counts-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR249BHQ_ChIP_ZNF592_K562_ENCSR949XNE_counts_pattern_2.n_3098-vs-ZNF592-201.alignment counts-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR249BHQ_ChIP_ZNF592_K562_ENCSR949XNE_counts_pattern_3.n_2925-vs-ZNF592-201.alignment counts-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR249BHQ_ChIP_ZNF592_K562_ENCSR949XNE_counts_pattern_4.n_1725-vs-ZNF592-201.alignment counts-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR249BHQ_ChIP_ZNF592_K562_ENCSR949XNE_counts_pattern_5.n_410-vs-ZNF592-201.alignment counts-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR249BHQ_ChIP_ZNF592_K562_ENCSR949XNE_counts_pattern_6.n_393-vs-ZNF592-201.alignment counts-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR249BHQ_ChIP_ZNF592_K562_ENCSR949XNE_counts_pattern_7.n_150-vs-ZNF592-201.alignment counts-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR249BHQ_ChIP_ZNF592_K562_ENCSR949XNE_counts_pattern_8.n_82-vs-ZNF592-201.alignment counts-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR249BHQ_ChIP_ZNF592_K562_ENCSR949XNE_counts_pattern_9.n_35-vs-ZNF592-201.alignment counts-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR701AQS_ChIP_ZNF592_MCF-7_ENCSR644KWE_counts_pattern_0.n_2088-vs-ZNF592-201.alignment counts-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR701AQS_ChIP_ZNF592_MCF-7_ENCSR644KWE_counts_pattern_1.n_724-vs-ZNF592-201.alignment counts-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR701AQS_ChIP_ZNF592_MCF-7_ENCSR644KWE_counts_pattern_2.n_126-vs-ZNF592-201.alignment counts-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR701AQS_ChIP_ZNF592_MCF-7_ENCSR644KWE_counts_pattern_3.n_41-vs-ZNF592-201.alignment counts-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR701AQS_ChIP_ZNF592_MCF-7_ENCSR644KWE_counts_pattern_4.n_21-vs-ZNF592-201.alignment counts-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF594-201/Hughes_GR_models_ZNF594_counts-pos.pattern_0.n_59-vs-ZNF594-201.alignment counts-znf_b1h_alignment/ZNF594-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF594-201/Hughes_GR_models_ZNF594_counts-pos.pattern_10.n_23-vs-ZNF594-201.alignment counts-znf_b1h_alignment/ZNF594-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF594-201/Hughes_GR_models_ZNF594_counts-pos.pattern_1.n_55-vs-ZNF594-201.alignment counts-znf_b1h_alignment/ZNF594-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF594-201/Hughes_GR_models_ZNF594_counts-pos.pattern_2.n_53-vs-ZNF594-201.alignment counts-znf_b1h_alignment/ZNF594-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF594-201/Hughes_GR_models_ZNF594_counts-pos.pattern_3.n_52-vs-ZNF594-201.alignment counts-znf_b1h_alignment/ZNF594-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF594-201/Hughes_GR_models_ZNF594_counts-pos.pattern_4.n_43-vs-ZNF594-201.alignment counts-znf_b1h_alignment/ZNF594-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF594-201/Hughes_GR_models_ZNF594_counts-pos.pattern_5.n_42-vs-ZNF594-201.alignment counts-znf_b1h_alignment/ZNF594-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF594-201/Hughes_GR_models_ZNF594_counts-pos.pattern_6.n_37-vs-ZNF594-201.alignment counts-znf_b1h_alignment/ZNF594-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF594-201/Hughes_GR_models_ZNF594_counts-pos.pattern_7.n_28-vs-ZNF594-201.alignment counts-znf_b1h_alignment/ZNF594-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF594-201/Hughes_GR_models_ZNF594_counts-pos.pattern_8.n_26-vs-ZNF594-201.alignment counts-znf_b1h_alignment/ZNF594-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF594-201/Hughes_GR_models_ZNF594_counts-pos.pattern_9.n_25-vs-ZNF594-201.alignment counts-znf_b1h_alignment/ZNF594-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF596-201/Hughes_GR_models_ZNF596_counts-pos.pattern_0.n_466-vs-ZNF596-201.alignment counts-znf_b1h_alignment/ZNF596-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF596-201/Hughes_GR_models_ZNF596_counts-pos.pattern_1.n_74-vs-ZNF596-201.alignment counts-znf_b1h_alignment/ZNF596-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF596-201/pos_patterns.ENCSR344SBD_ChIP_ZNF596_HEK293_ENCSR630UCD_counts_pattern_0.n_8014-vs-ZNF596-201.alignment counts-znf_b1h_alignment/ZNF596-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF596-201/pos_patterns.ENCSR344SBD_ChIP_ZNF596_HEK293_ENCSR630UCD_counts_pattern_1.n_462-vs-ZNF596-201.alignment counts-znf_b1h_alignment/ZNF596-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF596-201/pos_patterns.ENCSR344SBD_ChIP_ZNF596_HEK293_ENCSR630UCD_counts_pattern_2.n_375-vs-ZNF596-201.alignment counts-znf_b1h_alignment/ZNF596-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF596-201/pos_patterns.ENCSR344SBD_ChIP_ZNF596_HEK293_ENCSR630UCD_counts_pattern_3.n_270-vs-ZNF596-201.alignment counts-znf_b1h_alignment/ZNF596-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF596-201/pos_patterns.ENCSR344SBD_ChIP_ZNF596_HEK293_ENCSR630UCD_counts_pattern_4.n_232-vs-ZNF596-201.alignment counts-znf_b1h_alignment/ZNF596-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF596-201/pos_patterns.ENCSR344SBD_ChIP_ZNF596_HEK293_ENCSR630UCD_counts_pattern_5.n_96-vs-ZNF596-201.alignment counts-znf_b1h_alignment/ZNF596-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF596-201/pos_patterns.ENCSR344SBD_ChIP_ZNF596_HEK293_ENCSR630UCD_counts_pattern_6.n_86-vs-ZNF596-201.alignment counts-znf_b1h_alignment/ZNF596-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF596-201/pos_patterns.ENCSR344SBD_ChIP_ZNF596_HEK293_ENCSR630UCD_counts_pattern_7.n_80-vs-ZNF596-201.alignment counts-znf_b1h_alignment/ZNF596-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF596-201/pos_patterns.ENCSR344SBD_ChIP_ZNF596_HEK293_ENCSR630UCD_counts_pattern_8.n_29-vs-ZNF596-201.alignment counts-znf_b1h_alignment/ZNF596-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF597-201/neg_patterns.ENCSR669PVF_ChIP_ZNF597_HepG2_ENCSR725ASL_counts_pattern_0.n_36-vs-ZNF597-201.alignment counts-znf_b1h_alignment/ZNF597-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF597-201/neg_patterns.ENCSR669PVF_ChIP_ZNF597_HepG2_ENCSR725ASL_counts_pattern_1.n_29-vs-ZNF597-201.alignment counts-znf_b1h_alignment/ZNF597-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF597-201/pos_patterns.ENCSR669PVF_ChIP_ZNF597_HepG2_ENCSR725ASL_counts_pattern_0.n_435-vs-ZNF597-201.alignment counts-znf_b1h_alignment/ZNF597-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF597-201/pos_patterns.ENCSR669PVF_ChIP_ZNF597_HepG2_ENCSR725ASL_counts_pattern_10.n_60-vs-ZNF597-201.alignment counts-znf_b1h_alignment/ZNF597-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF597-201/pos_patterns.ENCSR669PVF_ChIP_ZNF597_HepG2_ENCSR725ASL_counts_pattern_11.n_50-vs-ZNF597-201.alignment counts-znf_b1h_alignment/ZNF597-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF597-201/pos_patterns.ENCSR669PVF_ChIP_ZNF597_HepG2_ENCSR725ASL_counts_pattern_12.n_49-vs-ZNF597-201.alignment counts-znf_b1h_alignment/ZNF597-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF597-201/pos_patterns.ENCSR669PVF_ChIP_ZNF597_HepG2_ENCSR725ASL_counts_pattern_13.n_22-vs-ZNF597-201.alignment counts-znf_b1h_alignment/ZNF597-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF597-201/pos_patterns.ENCSR669PVF_ChIP_ZNF597_HepG2_ENCSR725ASL_counts_pattern_1.n_217-vs-ZNF597-201.alignment counts-znf_b1h_alignment/ZNF597-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF597-201/pos_patterns.ENCSR669PVF_ChIP_ZNF597_HepG2_ENCSR725ASL_counts_pattern_2.n_198-vs-ZNF597-201.alignment counts-znf_b1h_alignment/ZNF597-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF597-201/pos_patterns.ENCSR669PVF_ChIP_ZNF597_HepG2_ENCSR725ASL_counts_pattern_3.n_178-vs-ZNF597-201.alignment counts-znf_b1h_alignment/ZNF597-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF597-201/pos_patterns.ENCSR669PVF_ChIP_ZNF597_HepG2_ENCSR725ASL_counts_pattern_4.n_109-vs-ZNF597-201.alignment counts-znf_b1h_alignment/ZNF597-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF597-201/pos_patterns.ENCSR669PVF_ChIP_ZNF597_HepG2_ENCSR725ASL_counts_pattern_5.n_85-vs-ZNF597-201.alignment counts-znf_b1h_alignment/ZNF597-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF597-201/pos_patterns.ENCSR669PVF_ChIP_ZNF597_HepG2_ENCSR725ASL_counts_pattern_6.n_77-vs-ZNF597-201.alignment counts-znf_b1h_alignment/ZNF597-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF597-201/pos_patterns.ENCSR669PVF_ChIP_ZNF597_HepG2_ENCSR725ASL_counts_pattern_7.n_77-vs-ZNF597-201.alignment counts-znf_b1h_alignment/ZNF597-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF597-201/pos_patterns.ENCSR669PVF_ChIP_ZNF597_HepG2_ENCSR725ASL_counts_pattern_8.n_73-vs-ZNF597-201.alignment counts-znf_b1h_alignment/ZNF597-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF597-201/pos_patterns.ENCSR669PVF_ChIP_ZNF597_HepG2_ENCSR725ASL_counts_pattern_9.n_63-vs-ZNF597-201.alignment counts-znf_b1h_alignment/ZNF597-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF600-201/pos_patterns.ENCSR017QBI_ChIP_ZNF600_HEK293_ENCSR638UMJ_counts_pattern_0.n_18285-vs-ZNF600-201.alignment counts-znf_b1h_alignment/ZNF600-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF600-201/pos_patterns.ENCSR017QBI_ChIP_ZNF600_HEK293_ENCSR638UMJ_counts_pattern_1.n_4275-vs-ZNF600-201.alignment counts-znf_b1h_alignment/ZNF600-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF600-201/pos_patterns.ENCSR017QBI_ChIP_ZNF600_HEK293_ENCSR638UMJ_counts_pattern_2.n_1502-vs-ZNF600-201.alignment counts-znf_b1h_alignment/ZNF600-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF600-201/pos_patterns.ENCSR017QBI_ChIP_ZNF600_HEK293_ENCSR638UMJ_counts_pattern_3.n_836-vs-ZNF600-201.alignment counts-znf_b1h_alignment/ZNF600-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF600-201/pos_patterns.ENCSR017QBI_ChIP_ZNF600_HEK293_ENCSR638UMJ_counts_pattern_4.n_31-vs-ZNF600-201.alignment counts-znf_b1h_alignment/ZNF600-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF600-201/pos_patterns.ENCSR017QBI_ChIP_ZNF600_HEK293_ENCSR638UMJ_counts_pattern_5.n_20-vs-ZNF600-201.alignment counts-znf_b1h_alignment/ZNF600-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF605-202/ChipExo_models_ZNF605_counts-pos.pattern_0.n_1040-vs-ZNF605-202.alignment counts-znf_b1h_alignment/ZNF605-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF605-202/ChipExo_models_ZNF605_counts-pos.pattern_1.n_26-vs-ZNF605-202.alignment counts-znf_b1h_alignment/ZNF605-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF605-202/pos_patterns.ENCSR903JFF_ChIP_ZNF605_HepG2_ENCSR924AMT_counts_pattern_0.n_1921-vs-ZNF605-202.alignment counts-znf_b1h_alignment/ZNF605-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF605-202/pos_patterns.ENCSR903JFF_ChIP_ZNF605_HepG2_ENCSR924AMT_counts_pattern_10.n_190-vs-ZNF605-202.alignment counts-znf_b1h_alignment/ZNF605-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF605-202/pos_patterns.ENCSR903JFF_ChIP_ZNF605_HepG2_ENCSR924AMT_counts_pattern_11.n_187-vs-ZNF605-202.alignment counts-znf_b1h_alignment/ZNF605-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF605-202/pos_patterns.ENCSR903JFF_ChIP_ZNF605_HepG2_ENCSR924AMT_counts_pattern_12.n_116-vs-ZNF605-202.alignment counts-znf_b1h_alignment/ZNF605-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF605-202/pos_patterns.ENCSR903JFF_ChIP_ZNF605_HepG2_ENCSR924AMT_counts_pattern_13.n_74-vs-ZNF605-202.alignment counts-znf_b1h_alignment/ZNF605-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF605-202/pos_patterns.ENCSR903JFF_ChIP_ZNF605_HepG2_ENCSR924AMT_counts_pattern_14.n_43-vs-ZNF605-202.alignment counts-znf_b1h_alignment/ZNF605-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF605-202/pos_patterns.ENCSR903JFF_ChIP_ZNF605_HepG2_ENCSR924AMT_counts_pattern_15.n_43-vs-ZNF605-202.alignment counts-znf_b1h_alignment/ZNF605-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF605-202/pos_patterns.ENCSR903JFF_ChIP_ZNF605_HepG2_ENCSR924AMT_counts_pattern_16.n_35-vs-ZNF605-202.alignment counts-znf_b1h_alignment/ZNF605-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF605-202/pos_patterns.ENCSR903JFF_ChIP_ZNF605_HepG2_ENCSR924AMT_counts_pattern_1.n_1661-vs-ZNF605-202.alignment counts-znf_b1h_alignment/ZNF605-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF605-202/pos_patterns.ENCSR903JFF_ChIP_ZNF605_HepG2_ENCSR924AMT_counts_pattern_2.n_1483-vs-ZNF605-202.alignment counts-znf_b1h_alignment/ZNF605-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF605-202/pos_patterns.ENCSR903JFF_ChIP_ZNF605_HepG2_ENCSR924AMT_counts_pattern_3.n_1386-vs-ZNF605-202.alignment counts-znf_b1h_alignment/ZNF605-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF605-202/pos_patterns.ENCSR903JFF_ChIP_ZNF605_HepG2_ENCSR924AMT_counts_pattern_4.n_932-vs-ZNF605-202.alignment counts-znf_b1h_alignment/ZNF605-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF605-202/pos_patterns.ENCSR903JFF_ChIP_ZNF605_HepG2_ENCSR924AMT_counts_pattern_5.n_844-vs-ZNF605-202.alignment counts-znf_b1h_alignment/ZNF605-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF605-202/pos_patterns.ENCSR903JFF_ChIP_ZNF605_HepG2_ENCSR924AMT_counts_pattern_6.n_446-vs-ZNF605-202.alignment counts-znf_b1h_alignment/ZNF605-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF605-202/pos_patterns.ENCSR903JFF_ChIP_ZNF605_HepG2_ENCSR924AMT_counts_pattern_7.n_356-vs-ZNF605-202.alignment counts-znf_b1h_alignment/ZNF605-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF605-202/pos_patterns.ENCSR903JFF_ChIP_ZNF605_HepG2_ENCSR924AMT_counts_pattern_8.n_349-vs-ZNF605-202.alignment counts-znf_b1h_alignment/ZNF605-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF605-202/pos_patterns.ENCSR903JFF_ChIP_ZNF605_HepG2_ENCSR924AMT_counts_pattern_9.n_305-vs-ZNF605-202.alignment counts-znf_b1h_alignment/ZNF605-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF607-201/pos_patterns.ENCSR788SXN_ChIP_ZNF607_HepG2_ENCSR744BXT_counts_pattern_0.n_3537-vs-ZNF607-201.alignment counts-znf_b1h_alignment/ZNF607-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF607-201/pos_patterns.ENCSR788SXN_ChIP_ZNF607_HepG2_ENCSR744BXT_counts_pattern_10.n_198-vs-ZNF607-201.alignment counts-znf_b1h_alignment/ZNF607-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF607-201/pos_patterns.ENCSR788SXN_ChIP_ZNF607_HepG2_ENCSR744BXT_counts_pattern_1.n_1382-vs-ZNF607-201.alignment counts-znf_b1h_alignment/ZNF607-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF607-201/pos_patterns.ENCSR788SXN_ChIP_ZNF607_HepG2_ENCSR744BXT_counts_pattern_2.n_748-vs-ZNF607-201.alignment counts-znf_b1h_alignment/ZNF607-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF607-201/pos_patterns.ENCSR788SXN_ChIP_ZNF607_HepG2_ENCSR744BXT_counts_pattern_3.n_693-vs-ZNF607-201.alignment counts-znf_b1h_alignment/ZNF607-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF607-201/pos_patterns.ENCSR788SXN_ChIP_ZNF607_HepG2_ENCSR744BXT_counts_pattern_4.n_583-vs-ZNF607-201.alignment counts-znf_b1h_alignment/ZNF607-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF607-201/pos_patterns.ENCSR788SXN_ChIP_ZNF607_HepG2_ENCSR744BXT_counts_pattern_5.n_576-vs-ZNF607-201.alignment counts-znf_b1h_alignment/ZNF607-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF607-201/pos_patterns.ENCSR788SXN_ChIP_ZNF607_HepG2_ENCSR744BXT_counts_pattern_6.n_409-vs-ZNF607-201.alignment counts-znf_b1h_alignment/ZNF607-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF607-201/pos_patterns.ENCSR788SXN_ChIP_ZNF607_HepG2_ENCSR744BXT_counts_pattern_7.n_393-vs-ZNF607-201.alignment counts-znf_b1h_alignment/ZNF607-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF607-201/pos_patterns.ENCSR788SXN_ChIP_ZNF607_HepG2_ENCSR744BXT_counts_pattern_8.n_204-vs-ZNF607-201.alignment counts-znf_b1h_alignment/ZNF607-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF607-201/pos_patterns.ENCSR788SXN_ChIP_ZNF607_HepG2_ENCSR744BXT_counts_pattern_9.n_202-vs-ZNF607-201.alignment counts-znf_b1h_alignment/ZNF607-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF608-201/neg_patterns.ENCSR837YGS_ChIP_ZNF608_SK-N-SH_ENCSR283DHR_counts_pattern_0.n_732-vs-ZNF608-201.alignment counts-znf_b1h_alignment/ZNF608-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF608-201/neg_patterns.ENCSR837YGS_ChIP_ZNF608_SK-N-SH_ENCSR283DHR_counts_pattern_1.n_79-vs-ZNF608-201.alignment counts-znf_b1h_alignment/ZNF608-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF608-201/neg_patterns.ENCSR837YGS_ChIP_ZNF608_SK-N-SH_ENCSR283DHR_counts_pattern_2.n_37-vs-ZNF608-201.alignment counts-znf_b1h_alignment/ZNF608-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF608-201/pos_patterns.ENCSR277VXX_ChIP_ZNF608_HepG2_ENCSR012EGF_counts_pattern_0.n_1770-vs-ZNF608-201.alignment counts-znf_b1h_alignment/ZNF608-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF608-201/pos_patterns.ENCSR277VXX_ChIP_ZNF608_HepG2_ENCSR012EGF_counts_pattern_10.n_262-vs-ZNF608-201.alignment counts-znf_b1h_alignment/ZNF608-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF608-201/pos_patterns.ENCSR277VXX_ChIP_ZNF608_HepG2_ENCSR012EGF_counts_pattern_11.n_240-vs-ZNF608-201.alignment counts-znf_b1h_alignment/ZNF608-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF608-201/pos_patterns.ENCSR277VXX_ChIP_ZNF608_HepG2_ENCSR012EGF_counts_pattern_12.n_234-vs-ZNF608-201.alignment counts-znf_b1h_alignment/ZNF608-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF608-201/pos_patterns.ENCSR277VXX_ChIP_ZNF608_HepG2_ENCSR012EGF_counts_pattern_13.n_212-vs-ZNF608-201.alignment counts-znf_b1h_alignment/ZNF608-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF608-201/pos_patterns.ENCSR277VXX_ChIP_ZNF608_HepG2_ENCSR012EGF_counts_pattern_14.n_201-vs-ZNF608-201.alignment counts-znf_b1h_alignment/ZNF608-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF608-201/pos_patterns.ENCSR277VXX_ChIP_ZNF608_HepG2_ENCSR012EGF_counts_pattern_15.n_179-vs-ZNF608-201.alignment counts-znf_b1h_alignment/ZNF608-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF608-201/pos_patterns.ENCSR277VXX_ChIP_ZNF608_HepG2_ENCSR012EGF_counts_pattern_16.n_83-vs-ZNF608-201.alignment counts-znf_b1h_alignment/ZNF608-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF608-201/pos_patterns.ENCSR277VXX_ChIP_ZNF608_HepG2_ENCSR012EGF_counts_pattern_1.n_1737-vs-ZNF608-201.alignment counts-znf_b1h_alignment/ZNF608-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF608-201/pos_patterns.ENCSR277VXX_ChIP_ZNF608_HepG2_ENCSR012EGF_counts_pattern_2.n_1377-vs-ZNF608-201.alignment counts-znf_b1h_alignment/ZNF608-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF608-201/pos_patterns.ENCSR277VXX_ChIP_ZNF608_HepG2_ENCSR012EGF_counts_pattern_3.n_622-vs-ZNF608-201.alignment counts-znf_b1h_alignment/ZNF608-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF608-201/pos_patterns.ENCSR277VXX_ChIP_ZNF608_HepG2_ENCSR012EGF_counts_pattern_4.n_472-vs-ZNF608-201.alignment counts-znf_b1h_alignment/ZNF608-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF608-201/pos_patterns.ENCSR277VXX_ChIP_ZNF608_HepG2_ENCSR012EGF_counts_pattern_5.n_341-vs-ZNF608-201.alignment counts-znf_b1h_alignment/ZNF608-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF608-201/pos_patterns.ENCSR277VXX_ChIP_ZNF608_HepG2_ENCSR012EGF_counts_pattern_6.n_329-vs-ZNF608-201.alignment counts-znf_b1h_alignment/ZNF608-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF608-201/pos_patterns.ENCSR277VXX_ChIP_ZNF608_HepG2_ENCSR012EGF_counts_pattern_7.n_318-vs-ZNF608-201.alignment counts-znf_b1h_alignment/ZNF608-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF608-201/pos_patterns.ENCSR277VXX_ChIP_ZNF608_HepG2_ENCSR012EGF_counts_pattern_8.n_307-vs-ZNF608-201.alignment counts-znf_b1h_alignment/ZNF608-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF608-201/pos_patterns.ENCSR277VXX_ChIP_ZNF608_HepG2_ENCSR012EGF_counts_pattern_9.n_269-vs-ZNF608-201.alignment counts-znf_b1h_alignment/ZNF608-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF608-201/pos_patterns.ENCSR837YGS_ChIP_ZNF608_SK-N-SH_ENCSR283DHR_counts_pattern_0.n_615-vs-ZNF608-201.alignment counts-znf_b1h_alignment/ZNF608-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF608-201/pos_patterns.ENCSR837YGS_ChIP_ZNF608_SK-N-SH_ENCSR283DHR_counts_pattern_1.n_111-vs-ZNF608-201.alignment counts-znf_b1h_alignment/ZNF608-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF608-201/pos_patterns.ENCSR837YGS_ChIP_ZNF608_SK-N-SH_ENCSR283DHR_counts_pattern_2.n_100-vs-ZNF608-201.alignment counts-znf_b1h_alignment/ZNF608-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF608-201/pos_patterns.ENCSR837YGS_ChIP_ZNF608_SK-N-SH_ENCSR283DHR_counts_pattern_3.n_67-vs-ZNF608-201.alignment counts-znf_b1h_alignment/ZNF608-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF608-201/pos_patterns.ENCSR837YGS_ChIP_ZNF608_SK-N-SH_ENCSR283DHR_counts_pattern_4.n_43-vs-ZNF608-201.alignment counts-znf_b1h_alignment/ZNF608-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF608-201/pos_patterns.ENCSR837YGS_ChIP_ZNF608_SK-N-SH_ENCSR283DHR_counts_pattern_5.n_38-vs-ZNF608-201.alignment counts-znf_b1h_alignment/ZNF608-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF608-201/pos_patterns.ENCSR837YGS_ChIP_ZNF608_SK-N-SH_ENCSR283DHR_counts_pattern_6.n_33-vs-ZNF608-201.alignment counts-znf_b1h_alignment/ZNF608-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF608-201/pos_patterns.ENCSR837YGS_ChIP_ZNF608_SK-N-SH_ENCSR283DHR_counts_pattern_7.n_31-vs-ZNF608-201.alignment counts-znf_b1h_alignment/ZNF608-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF608-201/pos_patterns.ENCSR837YGS_ChIP_ZNF608_SK-N-SH_ENCSR283DHR_counts_pattern_8.n_30-vs-ZNF608-201.alignment counts-znf_b1h_alignment/ZNF608-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/neg_patterns.ENCSR407BPU_ChIP_ZNF609_HepG2_ENCSR257LLI_counts_pattern_0.n_29-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/neg_patterns.ENCSR407BPU_ChIP_ZNF609_HepG2_ENCSR257LLI_counts_pattern_1.n_22-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/neg_patterns.ENCSR407BPU_ChIP_ZNF609_HepG2_ENCSR257LLI_counts_pattern_2.n_21-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/neg_patterns.ENCSR940PYZ_ChIP_ZNF609_K562_ENCSR428KUN_counts_pattern_0.n_286-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/neg_patterns.ENCSR940PYZ_ChIP_ZNF609_K562_ENCSR428KUN_counts_pattern_10.n_24-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/neg_patterns.ENCSR940PYZ_ChIP_ZNF609_K562_ENCSR428KUN_counts_pattern_1.n_134-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/neg_patterns.ENCSR940PYZ_ChIP_ZNF609_K562_ENCSR428KUN_counts_pattern_2.n_65-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/neg_patterns.ENCSR940PYZ_ChIP_ZNF609_K562_ENCSR428KUN_counts_pattern_3.n_51-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/neg_patterns.ENCSR940PYZ_ChIP_ZNF609_K562_ENCSR428KUN_counts_pattern_4.n_49-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/neg_patterns.ENCSR940PYZ_ChIP_ZNF609_K562_ENCSR428KUN_counts_pattern_5.n_48-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/neg_patterns.ENCSR940PYZ_ChIP_ZNF609_K562_ENCSR428KUN_counts_pattern_6.n_36-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/neg_patterns.ENCSR940PYZ_ChIP_ZNF609_K562_ENCSR428KUN_counts_pattern_7.n_35-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/neg_patterns.ENCSR940PYZ_ChIP_ZNF609_K562_ENCSR428KUN_counts_pattern_8.n_27-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/neg_patterns.ENCSR940PYZ_ChIP_ZNF609_K562_ENCSR428KUN_counts_pattern_9.n_27-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/pos_patterns.ENCSR407BPU_ChIP_ZNF609_HepG2_ENCSR257LLI_counts_pattern_0.n_7505-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/pos_patterns.ENCSR407BPU_ChIP_ZNF609_HepG2_ENCSR257LLI_counts_pattern_10.n_65-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/pos_patterns.ENCSR407BPU_ChIP_ZNF609_HepG2_ENCSR257LLI_counts_pattern_11.n_50-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/pos_patterns.ENCSR407BPU_ChIP_ZNF609_HepG2_ENCSR257LLI_counts_pattern_12.n_29-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/pos_patterns.ENCSR407BPU_ChIP_ZNF609_HepG2_ENCSR257LLI_counts_pattern_13.n_25-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/pos_patterns.ENCSR407BPU_ChIP_ZNF609_HepG2_ENCSR257LLI_counts_pattern_14.n_23-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/pos_patterns.ENCSR407BPU_ChIP_ZNF609_HepG2_ENCSR257LLI_counts_pattern_1.n_5283-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/pos_patterns.ENCSR407BPU_ChIP_ZNF609_HepG2_ENCSR257LLI_counts_pattern_2.n_1849-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/pos_patterns.ENCSR407BPU_ChIP_ZNF609_HepG2_ENCSR257LLI_counts_pattern_3.n_1250-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/pos_patterns.ENCSR407BPU_ChIP_ZNF609_HepG2_ENCSR257LLI_counts_pattern_4.n_1247-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/pos_patterns.ENCSR407BPU_ChIP_ZNF609_HepG2_ENCSR257LLI_counts_pattern_5.n_957-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/pos_patterns.ENCSR407BPU_ChIP_ZNF609_HepG2_ENCSR257LLI_counts_pattern_6.n_892-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/pos_patterns.ENCSR407BPU_ChIP_ZNF609_HepG2_ENCSR257LLI_counts_pattern_7.n_720-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/pos_patterns.ENCSR407BPU_ChIP_ZNF609_HepG2_ENCSR257LLI_counts_pattern_8.n_671-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/pos_patterns.ENCSR407BPU_ChIP_ZNF609_HepG2_ENCSR257LLI_counts_pattern_9.n_245-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/pos_patterns.ENCSR940PYZ_ChIP_ZNF609_K562_ENCSR428KUN_counts_pattern_0.n_1311-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/pos_patterns.ENCSR940PYZ_ChIP_ZNF609_K562_ENCSR428KUN_counts_pattern_10.n_200-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/pos_patterns.ENCSR940PYZ_ChIP_ZNF609_K562_ENCSR428KUN_counts_pattern_11.n_160-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/pos_patterns.ENCSR940PYZ_ChIP_ZNF609_K562_ENCSR428KUN_counts_pattern_12.n_146-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/pos_patterns.ENCSR940PYZ_ChIP_ZNF609_K562_ENCSR428KUN_counts_pattern_13.n_118-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/pos_patterns.ENCSR940PYZ_ChIP_ZNF609_K562_ENCSR428KUN_counts_pattern_14.n_110-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/pos_patterns.ENCSR940PYZ_ChIP_ZNF609_K562_ENCSR428KUN_counts_pattern_15.n_99-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/pos_patterns.ENCSR940PYZ_ChIP_ZNF609_K562_ENCSR428KUN_counts_pattern_16.n_69-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/pos_patterns.ENCSR940PYZ_ChIP_ZNF609_K562_ENCSR428KUN_counts_pattern_17.n_69-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/pos_patterns.ENCSR940PYZ_ChIP_ZNF609_K562_ENCSR428KUN_counts_pattern_18.n_54-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/pos_patterns.ENCSR940PYZ_ChIP_ZNF609_K562_ENCSR428KUN_counts_pattern_19.n_43-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/pos_patterns.ENCSR940PYZ_ChIP_ZNF609_K562_ENCSR428KUN_counts_pattern_1.n_524-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/pos_patterns.ENCSR940PYZ_ChIP_ZNF609_K562_ENCSR428KUN_counts_pattern_20.n_43-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/pos_patterns.ENCSR940PYZ_ChIP_ZNF609_K562_ENCSR428KUN_counts_pattern_21.n_34-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/pos_patterns.ENCSR940PYZ_ChIP_ZNF609_K562_ENCSR428KUN_counts_pattern_22.n_33-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/pos_patterns.ENCSR940PYZ_ChIP_ZNF609_K562_ENCSR428KUN_counts_pattern_23.n_26-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/pos_patterns.ENCSR940PYZ_ChIP_ZNF609_K562_ENCSR428KUN_counts_pattern_2.n_470-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/pos_patterns.ENCSR940PYZ_ChIP_ZNF609_K562_ENCSR428KUN_counts_pattern_3.n_454-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/pos_patterns.ENCSR940PYZ_ChIP_ZNF609_K562_ENCSR428KUN_counts_pattern_4.n_382-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/pos_patterns.ENCSR940PYZ_ChIP_ZNF609_K562_ENCSR428KUN_counts_pattern_5.n_279-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/pos_patterns.ENCSR940PYZ_ChIP_ZNF609_K562_ENCSR428KUN_counts_pattern_6.n_267-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/pos_patterns.ENCSR940PYZ_ChIP_ZNF609_K562_ENCSR428KUN_counts_pattern_7.n_253-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/pos_patterns.ENCSR940PYZ_ChIP_ZNF609_K562_ENCSR428KUN_counts_pattern_8.n_241-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF609-201/pos_patterns.ENCSR940PYZ_ChIP_ZNF609_K562_ENCSR428KUN_counts_pattern_9.n_201-vs-ZNF609-201.alignment counts-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF610-201/ChipExo_models_ZNF610_counts-pos.pattern_0.n_4332-vs-ZNF610-201.alignment counts-znf_b1h_alignment/ZNF610-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF610-201/ChipExo_models_ZNF610_counts-pos.pattern_1.n_53-vs-ZNF610-201.alignment counts-znf_b1h_alignment/ZNF610-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF610-201/Hughes_GR_models_ZNF610_counts-pos.pattern_0.n_573-vs-ZNF610-201.alignment counts-znf_b1h_alignment/ZNF610-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF610-201/Hughes_GR_models_ZNF610_counts-pos.pattern_1.n_409-vs-ZNF610-201.alignment counts-znf_b1h_alignment/ZNF610-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF610-201/Hughes_GR_models_ZNF610_counts-pos.pattern_2.n_209-vs-ZNF610-201.alignment counts-znf_b1h_alignment/ZNF610-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF610-201/Hughes_GR_models_ZNF610_counts-pos.pattern_3.n_67-vs-ZNF610-201.alignment counts-znf_b1h_alignment/ZNF610-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF610-201/Hughes_GR_models_ZNF610_counts-pos.pattern_4.n_28-vs-ZNF610-201.alignment counts-znf_b1h_alignment/ZNF610-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF610-201/pos_patterns.ENCSR691TXI_ChIP_ZNF610_HEK293_ENCSR034YDZ_counts_pattern_0.n_2717-vs-ZNF610-201.alignment counts-znf_b1h_alignment/ZNF610-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF610-201/pos_patterns.ENCSR691TXI_ChIP_ZNF610_HEK293_ENCSR034YDZ_counts_pattern_1.n_1850-vs-ZNF610-201.alignment counts-znf_b1h_alignment/ZNF610-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF610-201/pos_patterns.ENCSR691TXI_ChIP_ZNF610_HEK293_ENCSR034YDZ_counts_pattern_2.n_800-vs-ZNF610-201.alignment counts-znf_b1h_alignment/ZNF610-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF610-201/pos_patterns.ENCSR691TXI_ChIP_ZNF610_HEK293_ENCSR034YDZ_counts_pattern_3.n_354-vs-ZNF610-201.alignment counts-znf_b1h_alignment/ZNF610-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF610-201/pos_patterns.ENCSR691TXI_ChIP_ZNF610_HEK293_ENCSR034YDZ_counts_pattern_4.n_58-vs-ZNF610-201.alignment counts-znf_b1h_alignment/ZNF610-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF610-201/pos_patterns.ENCSR691TXI_ChIP_ZNF610_HEK293_ENCSR034YDZ_counts_pattern_5.n_57-vs-ZNF610-201.alignment counts-znf_b1h_alignment/ZNF610-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF610-201/pos_patterns.ENCSR691TXI_ChIP_ZNF610_HEK293_ENCSR034YDZ_counts_pattern_6.n_28-vs-ZNF610-201.alignment counts-znf_b1h_alignment/ZNF610-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF611-201/ChipExo_models_ZNF611_counts-pos.pattern_0.n_2128-vs-ZNF611-201.alignment counts-znf_b1h_alignment/ZNF611-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF611-201/ChipExo_models_ZNF611_counts-pos.pattern_1.n_96-vs-ZNF611-201.alignment counts-znf_b1h_alignment/ZNF611-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF611-201/ChipExo_models_ZNF611_counts-pos.pattern_2.n_94-vs-ZNF611-201.alignment counts-znf_b1h_alignment/ZNF611-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF613-201/ChipExo_models_ZNF613_counts-pos.pattern_0.n_230-vs-ZNF613-201.alignment counts-znf_b1h_alignment/ZNF613-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF613-201/ChipExo_models_ZNF613_counts-pos.pattern_1.n_194-vs-ZNF613-201.alignment counts-znf_b1h_alignment/ZNF613-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF613-201/ChipExo_models_ZNF613_counts-pos.pattern_2.n_126-vs-ZNF613-201.alignment counts-znf_b1h_alignment/ZNF613-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF613-201/ChipExo_models_ZNF613_counts-pos.pattern_3.n_85-vs-ZNF613-201.alignment counts-znf_b1h_alignment/ZNF613-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF613-201/ChipExo_models_ZNF613_counts-pos.pattern_4.n_42-vs-ZNF613-201.alignment counts-znf_b1h_alignment/ZNF613-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF613-201/ChipExo_models_ZNF613_counts-pos.pattern_5.n_25-vs-ZNF613-201.alignment counts-znf_b1h_alignment/ZNF613-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF613-201/ChipExo_models_ZNF613_counts-pos.pattern_6.n_22-vs-ZNF613-201.alignment counts-znf_b1h_alignment/ZNF613-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF614-201/ChipExo_models_ZNF614_counts-pos.pattern_0.n_301-vs-ZNF614-201.alignment counts-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF614-201/ChipExo_models_ZNF614_counts-pos.pattern_1.n_38-vs-ZNF614-201.alignment counts-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF614-201/pos_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_counts_pattern_0.n_4717-vs-ZNF614-201.alignment counts-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF614-201/pos_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_counts_pattern_10.n_328-vs-ZNF614-201.alignment counts-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF614-201/pos_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_counts_pattern_11.n_323-vs-ZNF614-201.alignment counts-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF614-201/pos_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_counts_pattern_12.n_130-vs-ZNF614-201.alignment counts-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF614-201/pos_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_counts_pattern_13.n_119-vs-ZNF614-201.alignment counts-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF614-201/pos_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_counts_pattern_14.n_43-vs-ZNF614-201.alignment counts-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF614-201/pos_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_counts_pattern_15.n_21-vs-ZNF614-201.alignment counts-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF614-201/pos_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_counts_pattern_1.n_2521-vs-ZNF614-201.alignment counts-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF614-201/pos_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_counts_pattern_2.n_2103-vs-ZNF614-201.alignment counts-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF614-201/pos_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_counts_pattern_3.n_2001-vs-ZNF614-201.alignment counts-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF614-201/pos_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_counts_pattern_4.n_1839-vs-ZNF614-201.alignment counts-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF614-201/pos_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_counts_pattern_5.n_1074-vs-ZNF614-201.alignment counts-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF614-201/pos_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_counts_pattern_6.n_762-vs-ZNF614-201.alignment counts-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF614-201/pos_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_counts_pattern_7.n_466-vs-ZNF614-201.alignment counts-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF614-201/pos_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_counts_pattern_8.n_431-vs-ZNF614-201.alignment counts-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF614-201/pos_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_counts_pattern_9.n_344-vs-ZNF614-201.alignment counts-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF615-201/ChipExo_models_ZNF615_counts-pos.pattern_0.n_176-vs-ZNF615-201.alignment counts-znf_b1h_alignment/ZNF615-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF615-201/ChipExo_models_ZNF615_counts-pos.pattern_1.n_21-vs-ZNF615-201.alignment counts-znf_b1h_alignment/ZNF615-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF615-201/neg_patterns.ENCSR286LPH_ChIP_ZNF615_HepG2_ENCSR031NXX_counts_pattern_0.n_53-vs-ZNF615-201.alignment counts-znf_b1h_alignment/ZNF615-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF615-201/neg_patterns.ENCSR286LPH_ChIP_ZNF615_HepG2_ENCSR031NXX_counts_pattern_1.n_45-vs-ZNF615-201.alignment counts-znf_b1h_alignment/ZNF615-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF615-201/neg_patterns.ENCSR286LPH_ChIP_ZNF615_HepG2_ENCSR031NXX_counts_pattern_2.n_37-vs-ZNF615-201.alignment counts-znf_b1h_alignment/ZNF615-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF615-201/neg_patterns.ENCSR286LPH_ChIP_ZNF615_HepG2_ENCSR031NXX_counts_pattern_3.n_36-vs-ZNF615-201.alignment counts-znf_b1h_alignment/ZNF615-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF615-201/neg_patterns.ENCSR286LPH_ChIP_ZNF615_HepG2_ENCSR031NXX_counts_pattern_4.n_34-vs-ZNF615-201.alignment counts-znf_b1h_alignment/ZNF615-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF615-201/neg_patterns.ENCSR286LPH_ChIP_ZNF615_HepG2_ENCSR031NXX_counts_pattern_5.n_33-vs-ZNF615-201.alignment counts-znf_b1h_alignment/ZNF615-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF615-201/neg_patterns.ENCSR286LPH_ChIP_ZNF615_HepG2_ENCSR031NXX_counts_pattern_6.n_30-vs-ZNF615-201.alignment counts-znf_b1h_alignment/ZNF615-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF615-201/neg_patterns.ENCSR286LPH_ChIP_ZNF615_HepG2_ENCSR031NXX_counts_pattern_7.n_21-vs-ZNF615-201.alignment counts-znf_b1h_alignment/ZNF615-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF615-201/pos_patterns.ENCSR286LPH_ChIP_ZNF615_HepG2_ENCSR031NXX_counts_pattern_0.n_1029-vs-ZNF615-201.alignment counts-znf_b1h_alignment/ZNF615-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF615-201/pos_patterns.ENCSR286LPH_ChIP_ZNF615_HepG2_ENCSR031NXX_counts_pattern_1.n_951-vs-ZNF615-201.alignment counts-znf_b1h_alignment/ZNF615-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF615-201/pos_patterns.ENCSR286LPH_ChIP_ZNF615_HepG2_ENCSR031NXX_counts_pattern_2.n_571-vs-ZNF615-201.alignment counts-znf_b1h_alignment/ZNF615-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF615-201/pos_patterns.ENCSR286LPH_ChIP_ZNF615_HepG2_ENCSR031NXX_counts_pattern_3.n_286-vs-ZNF615-201.alignment counts-znf_b1h_alignment/ZNF615-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF615-201/pos_patterns.ENCSR286LPH_ChIP_ZNF615_HepG2_ENCSR031NXX_counts_pattern_4.n_278-vs-ZNF615-201.alignment counts-znf_b1h_alignment/ZNF615-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF615-201/pos_patterns.ENCSR286LPH_ChIP_ZNF615_HepG2_ENCSR031NXX_counts_pattern_5.n_237-vs-ZNF615-201.alignment counts-znf_b1h_alignment/ZNF615-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF615-201/pos_patterns.ENCSR286LPH_ChIP_ZNF615_HepG2_ENCSR031NXX_counts_pattern_6.n_183-vs-ZNF615-201.alignment counts-znf_b1h_alignment/ZNF615-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF615-201/pos_patterns.ENCSR286LPH_ChIP_ZNF615_HepG2_ENCSR031NXX_counts_pattern_7.n_156-vs-ZNF615-201.alignment counts-znf_b1h_alignment/ZNF615-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF615-201/pos_patterns.ENCSR286LPH_ChIP_ZNF615_HepG2_ENCSR031NXX_counts_pattern_8.n_117-vs-ZNF615-201.alignment counts-znf_b1h_alignment/ZNF615-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF615-201/pos_patterns.ENCSR286LPH_ChIP_ZNF615_HepG2_ENCSR031NXX_counts_pattern_9.n_40-vs-ZNF615-201.alignment counts-znf_b1h_alignment/ZNF615-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF616-204/ChipExo_models_ZNF616_counts-pos.pattern_0.n_337-vs-ZNF616-204.alignment counts-znf_b1h_alignment/ZNF616-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF616-204/ChipExo_models_ZNF616_counts-pos.pattern_1.n_309-vs-ZNF616-204.alignment counts-znf_b1h_alignment/ZNF616-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF616-204/ChipExo_models_ZNF616_counts-pos.pattern_2.n_32-vs-ZNF616-204.alignment counts-znf_b1h_alignment/ZNF616-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF616-204/ChipExo_models_ZNF616_counts-pos.pattern_3.n_23-vs-ZNF616-204.alignment counts-znf_b1h_alignment/ZNF616-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF616-204/pos_patterns.ENCSR654PQY_ChIP_ZNF616_HepG2_ENCSR555TGG_counts_pattern_0.n_1124-vs-ZNF616-204.alignment counts-znf_b1h_alignment/ZNF616-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF616-204/pos_patterns.ENCSR654PQY_ChIP_ZNF616_HepG2_ENCSR555TGG_counts_pattern_10.n_28-vs-ZNF616-204.alignment counts-znf_b1h_alignment/ZNF616-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF616-204/pos_patterns.ENCSR654PQY_ChIP_ZNF616_HepG2_ENCSR555TGG_counts_pattern_11.n_24-vs-ZNF616-204.alignment counts-znf_b1h_alignment/ZNF616-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF616-204/pos_patterns.ENCSR654PQY_ChIP_ZNF616_HepG2_ENCSR555TGG_counts_pattern_12.n_23-vs-ZNF616-204.alignment counts-znf_b1h_alignment/ZNF616-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF616-204/pos_patterns.ENCSR654PQY_ChIP_ZNF616_HepG2_ENCSR555TGG_counts_pattern_13.n_22-vs-ZNF616-204.alignment counts-znf_b1h_alignment/ZNF616-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF616-204/pos_patterns.ENCSR654PQY_ChIP_ZNF616_HepG2_ENCSR555TGG_counts_pattern_1.n_981-vs-ZNF616-204.alignment counts-znf_b1h_alignment/ZNF616-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF616-204/pos_patterns.ENCSR654PQY_ChIP_ZNF616_HepG2_ENCSR555TGG_counts_pattern_2.n_747-vs-ZNF616-204.alignment counts-znf_b1h_alignment/ZNF616-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF616-204/pos_patterns.ENCSR654PQY_ChIP_ZNF616_HepG2_ENCSR555TGG_counts_pattern_3.n_635-vs-ZNF616-204.alignment counts-znf_b1h_alignment/ZNF616-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF616-204/pos_patterns.ENCSR654PQY_ChIP_ZNF616_HepG2_ENCSR555TGG_counts_pattern_4.n_517-vs-ZNF616-204.alignment counts-znf_b1h_alignment/ZNF616-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF616-204/pos_patterns.ENCSR654PQY_ChIP_ZNF616_HepG2_ENCSR555TGG_counts_pattern_5.n_237-vs-ZNF616-204.alignment counts-znf_b1h_alignment/ZNF616-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF616-204/pos_patterns.ENCSR654PQY_ChIP_ZNF616_HepG2_ENCSR555TGG_counts_pattern_6.n_190-vs-ZNF616-204.alignment counts-znf_b1h_alignment/ZNF616-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF616-204/pos_patterns.ENCSR654PQY_ChIP_ZNF616_HepG2_ENCSR555TGG_counts_pattern_7.n_146-vs-ZNF616-204.alignment counts-znf_b1h_alignment/ZNF616-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF616-204/pos_patterns.ENCSR654PQY_ChIP_ZNF616_HepG2_ENCSR555TGG_counts_pattern_8.n_113-vs-ZNF616-204.alignment counts-znf_b1h_alignment/ZNF616-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF616-204/pos_patterns.ENCSR654PQY_ChIP_ZNF616_HepG2_ENCSR555TGG_counts_pattern_9.n_55-vs-ZNF616-204.alignment counts-znf_b1h_alignment/ZNF616-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF619-201/ChipExo_models_ZNF619_counts-pos.pattern_0.n_99-vs-ZNF619-201.alignment counts-znf_b1h_alignment/ZNF619-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF619-201/ChipExo_models_ZNF619_counts-pos.pattern_1.n_95-vs-ZNF619-201.alignment counts-znf_b1h_alignment/ZNF619-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF619-201/neg_patterns.ENCSR613RDS_ChIP_ZNF619_HepG2_ENCSR516SXF_counts_pattern_0.n_353-vs-ZNF619-201.alignment counts-znf_b1h_alignment/ZNF619-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF619-201/neg_patterns.ENCSR613RDS_ChIP_ZNF619_HepG2_ENCSR516SXF_counts_pattern_1.n_242-vs-ZNF619-201.alignment counts-znf_b1h_alignment/ZNF619-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF619-201/neg_patterns.ENCSR613RDS_ChIP_ZNF619_HepG2_ENCSR516SXF_counts_pattern_2.n_220-vs-ZNF619-201.alignment counts-znf_b1h_alignment/ZNF619-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF619-201/neg_patterns.ENCSR613RDS_ChIP_ZNF619_HepG2_ENCSR516SXF_counts_pattern_3.n_54-vs-ZNF619-201.alignment counts-znf_b1h_alignment/ZNF619-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF619-201/neg_patterns.ENCSR613RDS_ChIP_ZNF619_HepG2_ENCSR516SXF_counts_pattern_4.n_21-vs-ZNF619-201.alignment counts-znf_b1h_alignment/ZNF619-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF619-201/pos_patterns.ENCSR613RDS_ChIP_ZNF619_HepG2_ENCSR516SXF_counts_pattern_0.n_1955-vs-ZNF619-201.alignment counts-znf_b1h_alignment/ZNF619-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF619-201/pos_patterns.ENCSR613RDS_ChIP_ZNF619_HepG2_ENCSR516SXF_counts_pattern_10.n_221-vs-ZNF619-201.alignment counts-znf_b1h_alignment/ZNF619-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF619-201/pos_patterns.ENCSR613RDS_ChIP_ZNF619_HepG2_ENCSR516SXF_counts_pattern_11.n_160-vs-ZNF619-201.alignment counts-znf_b1h_alignment/ZNF619-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF619-201/pos_patterns.ENCSR613RDS_ChIP_ZNF619_HepG2_ENCSR516SXF_counts_pattern_12.n_158-vs-ZNF619-201.alignment counts-znf_b1h_alignment/ZNF619-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF619-201/pos_patterns.ENCSR613RDS_ChIP_ZNF619_HepG2_ENCSR516SXF_counts_pattern_13.n_82-vs-ZNF619-201.alignment counts-znf_b1h_alignment/ZNF619-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF619-201/pos_patterns.ENCSR613RDS_ChIP_ZNF619_HepG2_ENCSR516SXF_counts_pattern_14.n_54-vs-ZNF619-201.alignment counts-znf_b1h_alignment/ZNF619-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF619-201/pos_patterns.ENCSR613RDS_ChIP_ZNF619_HepG2_ENCSR516SXF_counts_pattern_15.n_38-vs-ZNF619-201.alignment counts-znf_b1h_alignment/ZNF619-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF619-201/pos_patterns.ENCSR613RDS_ChIP_ZNF619_HepG2_ENCSR516SXF_counts_pattern_1.n_1831-vs-ZNF619-201.alignment counts-znf_b1h_alignment/ZNF619-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF619-201/pos_patterns.ENCSR613RDS_ChIP_ZNF619_HepG2_ENCSR516SXF_counts_pattern_2.n_1489-vs-ZNF619-201.alignment counts-znf_b1h_alignment/ZNF619-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF619-201/pos_patterns.ENCSR613RDS_ChIP_ZNF619_HepG2_ENCSR516SXF_counts_pattern_3.n_754-vs-ZNF619-201.alignment counts-znf_b1h_alignment/ZNF619-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF619-201/pos_patterns.ENCSR613RDS_ChIP_ZNF619_HepG2_ENCSR516SXF_counts_pattern_4.n_685-vs-ZNF619-201.alignment counts-znf_b1h_alignment/ZNF619-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF619-201/pos_patterns.ENCSR613RDS_ChIP_ZNF619_HepG2_ENCSR516SXF_counts_pattern_5.n_603-vs-ZNF619-201.alignment counts-znf_b1h_alignment/ZNF619-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF619-201/pos_patterns.ENCSR613RDS_ChIP_ZNF619_HepG2_ENCSR516SXF_counts_pattern_6.n_443-vs-ZNF619-201.alignment counts-znf_b1h_alignment/ZNF619-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF619-201/pos_patterns.ENCSR613RDS_ChIP_ZNF619_HepG2_ENCSR516SXF_counts_pattern_7.n_345-vs-ZNF619-201.alignment counts-znf_b1h_alignment/ZNF619-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF619-201/pos_patterns.ENCSR613RDS_ChIP_ZNF619_HepG2_ENCSR516SXF_counts_pattern_8.n_263-vs-ZNF619-201.alignment counts-znf_b1h_alignment/ZNF619-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF619-201/pos_patterns.ENCSR613RDS_ChIP_ZNF619_HepG2_ENCSR516SXF_counts_pattern_9.n_255-vs-ZNF619-201.alignment counts-znf_b1h_alignment/ZNF619-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF620-201/ChipExo_models_ZNF620_counts-pos.pattern_0.n_117-vs-ZNF620-201.alignment counts-znf_b1h_alignment/ZNF620-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF621-202/ChipExo_models_ZNF621_counts-pos.pattern_0.n_205-vs-ZNF621-202.alignment counts-znf_b1h_alignment/ZNF621-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF621-202/ChipExo_models_ZNF621_counts-pos.pattern_1.n_25-vs-ZNF621-202.alignment counts-znf_b1h_alignment/ZNF621-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF621-202/Hughes_NB_models_ZNF621_counts-pos.pattern_0.n_1423-vs-ZNF621-202.alignment counts-znf_b1h_alignment/ZNF621-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF621-202/Hughes_NB_models_ZNF621_counts-pos.pattern_1.n_909-vs-ZNF621-202.alignment counts-znf_b1h_alignment/ZNF621-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF621-202/Hughes_NB_models_ZNF621_counts-pos.pattern_2.n_69-vs-ZNF621-202.alignment counts-znf_b1h_alignment/ZNF621-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF621-202/pos_patterns.ENCSR858FAN_ChIP_ZNF621_HEK293_ENCSR710WKS_counts_pattern_0.n_456-vs-ZNF621-202.alignment counts-znf_b1h_alignment/ZNF621-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF621-202/pos_patterns.ENCSR858FAN_ChIP_ZNF621_HEK293_ENCSR710WKS_counts_pattern_1.n_82-vs-ZNF621-202.alignment counts-znf_b1h_alignment/ZNF621-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF621-202/pos_patterns.ENCSR858FAN_ChIP_ZNF621_HEK293_ENCSR710WKS_counts_pattern_2.n_26-vs-ZNF621-202.alignment counts-znf_b1h_alignment/ZNF621-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF621-202/pos_patterns.ENCSR858FAN_ChIP_ZNF621_HEK293_ENCSR710WKS_counts_pattern_3.n_22-vs-ZNF621-202.alignment counts-znf_b1h_alignment/ZNF621-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF623-201/pos_patterns.ENCSR022IZK_ChIP_ZNF623_HEK293_ENCSR793WAG_counts_pattern_0.n_6107-vs-ZNF623-201.alignment counts-znf_b1h_alignment/ZNF623-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF623-201/pos_patterns.ENCSR022IZK_ChIP_ZNF623_HEK293_ENCSR793WAG_counts_pattern_1.n_5882-vs-ZNF623-201.alignment counts-znf_b1h_alignment/ZNF623-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF623-201/pos_patterns.ENCSR022IZK_ChIP_ZNF623_HEK293_ENCSR793WAG_counts_pattern_2.n_139-vs-ZNF623-201.alignment counts-znf_b1h_alignment/ZNF623-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF623-201/pos_patterns.ENCSR022IZK_ChIP_ZNF623_HEK293_ENCSR793WAG_counts_pattern_3.n_57-vs-ZNF623-201.alignment counts-znf_b1h_alignment/ZNF623-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF623-201/pos_patterns.ENCSR022IZK_ChIP_ZNF623_HEK293_ENCSR793WAG_counts_pattern_4.n_47-vs-ZNF623-201.alignment counts-znf_b1h_alignment/ZNF623-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF623-201/pos_patterns.ENCSR022IZK_ChIP_ZNF623_HEK293_ENCSR793WAG_counts_pattern_5.n_27-vs-ZNF623-201.alignment counts-znf_b1h_alignment/ZNF623-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF624-201/pos_patterns.ENCSR419VVI_ChIP_ZNF624_A549_ENCSR207QZT_counts_pattern_0.n_1018-vs-ZNF624-201.alignment counts-znf_b1h_alignment/ZNF624-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF624-201/pos_patterns.ENCSR419VVI_ChIP_ZNF624_A549_ENCSR207QZT_counts_pattern_1.n_421-vs-ZNF624-201.alignment counts-znf_b1h_alignment/ZNF624-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF624-201/pos_patterns.ENCSR419VVI_ChIP_ZNF624_A549_ENCSR207QZT_counts_pattern_2.n_207-vs-ZNF624-201.alignment counts-znf_b1h_alignment/ZNF624-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF624-201/pos_patterns.ENCSR419VVI_ChIP_ZNF624_A549_ENCSR207QZT_counts_pattern_3.n_130-vs-ZNF624-201.alignment counts-znf_b1h_alignment/ZNF624-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF624-201/pos_patterns.ENCSR419VVI_ChIP_ZNF624_A549_ENCSR207QZT_counts_pattern_4.n_63-vs-ZNF624-201.alignment counts-znf_b1h_alignment/ZNF624-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF624-201/pos_patterns.ENCSR419VVI_ChIP_ZNF624_A549_ENCSR207QZT_counts_pattern_5.n_56-vs-ZNF624-201.alignment counts-znf_b1h_alignment/ZNF624-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF624-201/pos_patterns.ENCSR419VVI_ChIP_ZNF624_A549_ENCSR207QZT_counts_pattern_6.n_55-vs-ZNF624-201.alignment counts-znf_b1h_alignment/ZNF624-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF624-201/pos_patterns.ENCSR419VVI_ChIP_ZNF624_A549_ENCSR207QZT_counts_pattern_7.n_21-vs-ZNF624-201.alignment counts-znf_b1h_alignment/ZNF624-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF624-201/pos_patterns.ENCSR878DES_ChIP_ZNF624_HEK293_ENCSR785YGG_counts_pattern_0.n_189-vs-ZNF624-201.alignment counts-znf_b1h_alignment/ZNF624-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF624-201/pos_patterns.ENCSR878DES_ChIP_ZNF624_HEK293_ENCSR785YGG_counts_pattern_1.n_149-vs-ZNF624-201.alignment counts-znf_b1h_alignment/ZNF624-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF624-201/pos_patterns.ENCSR878DES_ChIP_ZNF624_HEK293_ENCSR785YGG_counts_pattern_2.n_90-vs-ZNF624-201.alignment counts-znf_b1h_alignment/ZNF624-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF624-201/pos_patterns.ENCSR878DES_ChIP_ZNF624_HEK293_ENCSR785YGG_counts_pattern_3.n_46-vs-ZNF624-201.alignment counts-znf_b1h_alignment/ZNF624-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF624-201/pos_patterns.ENCSR878DES_ChIP_ZNF624_HEK293_ENCSR785YGG_counts_pattern_4.n_24-vs-ZNF624-201.alignment counts-znf_b1h_alignment/ZNF624-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF624-201/pos_patterns.ENCSR878DES_ChIP_ZNF624_HEK293_ENCSR785YGG_counts_pattern_5.n_24-vs-ZNF624-201.alignment counts-znf_b1h_alignment/ZNF624-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF626-204/ChipExo_models_ZNF626_counts-pos.pattern_0.n_258-vs-ZNF626-204.alignment counts-znf_b1h_alignment/ZNF626-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF626-204/ChipExo_models_ZNF626_counts-pos.pattern_1.n_38-vs-ZNF626-204.alignment counts-znf_b1h_alignment/ZNF626-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF626-204/neg_patterns.ENCSR588MQZ_ChIP_ZNF626_HEK293_ENCSR178IZT_counts_pattern_0.n_378-vs-ZNF626-204.alignment counts-znf_b1h_alignment/ZNF626-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF626-204/neg_patterns.ENCSR588MQZ_ChIP_ZNF626_HEK293_ENCSR178IZT_counts_pattern_1.n_39-vs-ZNF626-204.alignment counts-znf_b1h_alignment/ZNF626-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF626-204/neg_patterns.ENCSR588MQZ_ChIP_ZNF626_HEK293_ENCSR178IZT_counts_pattern_2.n_37-vs-ZNF626-204.alignment counts-znf_b1h_alignment/ZNF626-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF626-204/neg_patterns.ENCSR588MQZ_ChIP_ZNF626_HEK293_ENCSR178IZT_counts_pattern_3.n_34-vs-ZNF626-204.alignment counts-znf_b1h_alignment/ZNF626-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF626-204/neg_patterns.ENCSR588MQZ_ChIP_ZNF626_HEK293_ENCSR178IZT_counts_pattern_4.n_33-vs-ZNF626-204.alignment counts-znf_b1h_alignment/ZNF626-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF626-204/neg_patterns.ENCSR588MQZ_ChIP_ZNF626_HEK293_ENCSR178IZT_counts_pattern_5.n_29-vs-ZNF626-204.alignment counts-znf_b1h_alignment/ZNF626-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF626-204/neg_patterns.ENCSR588MQZ_ChIP_ZNF626_HEK293_ENCSR178IZT_counts_pattern_6.n_28-vs-ZNF626-204.alignment counts-znf_b1h_alignment/ZNF626-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF626-204/pos_patterns.ENCSR588MQZ_ChIP_ZNF626_HEK293_ENCSR178IZT_counts_pattern_0.n_382-vs-ZNF626-204.alignment counts-znf_b1h_alignment/ZNF626-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF626-204/pos_patterns.ENCSR588MQZ_ChIP_ZNF626_HEK293_ENCSR178IZT_counts_pattern_1.n_324-vs-ZNF626-204.alignment counts-znf_b1h_alignment/ZNF626-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF626-204/pos_patterns.ENCSR588MQZ_ChIP_ZNF626_HEK293_ENCSR178IZT_counts_pattern_2.n_32-vs-ZNF626-204.alignment counts-znf_b1h_alignment/ZNF626-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF626-204/pos_patterns.ENCSR588MQZ_ChIP_ZNF626_HEK293_ENCSR178IZT_counts_pattern_3.n_28-vs-ZNF626-204.alignment counts-znf_b1h_alignment/ZNF626-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF627-201/ChipExo_models_ZNF627_counts-pos.pattern_0.n_483-vs-ZNF627-201.alignment counts-znf_b1h_alignment/ZNF627-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF627-201/ChipExo_models_ZNF627_counts-pos.pattern_1.n_240-vs-ZNF627-201.alignment counts-znf_b1h_alignment/ZNF627-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF627-201/ChipExo_models_ZNF627_counts-pos.pattern_2.n_150-vs-ZNF627-201.alignment counts-znf_b1h_alignment/ZNF627-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF629-201/pos_patterns.ENCSR351NON_ChIP_ZNF629_HEK293_ENCSR205FSW_counts_pattern_0.n_8679-vs-ZNF629-201.alignment counts-znf_b1h_alignment/ZNF629-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF629-201/pos_patterns.ENCSR351NON_ChIP_ZNF629_HEK293_ENCSR205FSW_counts_pattern_1.n_5881-vs-ZNF629-201.alignment counts-znf_b1h_alignment/ZNF629-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF629-201/pos_patterns.ENCSR351NON_ChIP_ZNF629_HEK293_ENCSR205FSW_counts_pattern_2.n_5777-vs-ZNF629-201.alignment counts-znf_b1h_alignment/ZNF629-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF629-201/pos_patterns.ENCSR351NON_ChIP_ZNF629_HEK293_ENCSR205FSW_counts_pattern_3.n_1964-vs-ZNF629-201.alignment counts-znf_b1h_alignment/ZNF629-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF629-201/pos_patterns.ENCSR351NON_ChIP_ZNF629_HEK293_ENCSR205FSW_counts_pattern_4.n_292-vs-ZNF629-201.alignment counts-znf_b1h_alignment/ZNF629-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF629-201/pos_patterns.ENCSR351NON_ChIP_ZNF629_HEK293_ENCSR205FSW_counts_pattern_5.n_251-vs-ZNF629-201.alignment counts-znf_b1h_alignment/ZNF629-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF629-201/pos_patterns.ENCSR351NON_ChIP_ZNF629_HEK293_ENCSR205FSW_counts_pattern_6.n_99-vs-ZNF629-201.alignment counts-znf_b1h_alignment/ZNF629-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF629-201/pos_patterns.ENCSR351NON_ChIP_ZNF629_HEK293_ENCSR205FSW_counts_pattern_7.n_43-vs-ZNF629-201.alignment counts-znf_b1h_alignment/ZNF629-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF629-201/pos_patterns.ENCSR351NON_ChIP_ZNF629_HEK293_ENCSR205FSW_counts_pattern_8.n_28-vs-ZNF629-201.alignment counts-znf_b1h_alignment/ZNF629-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF629-201/pos_patterns.ENCSR351NON_ChIP_ZNF629_HEK293_ENCSR205FSW_counts_pattern_9.n_21-vs-ZNF629-201.alignment counts-znf_b1h_alignment/ZNF629-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF629-201/pos_patterns.ENCSR363ASY_ChIP_ZNF629_HepG2_ENCSR465FQP_counts_pattern_0.n_17038-vs-ZNF629-201.alignment counts-znf_b1h_alignment/ZNF629-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF629-201/pos_patterns.ENCSR363ASY_ChIP_ZNF629_HepG2_ENCSR465FQP_counts_pattern_1.n_2702-vs-ZNF629-201.alignment counts-znf_b1h_alignment/ZNF629-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF629-201/pos_patterns.ENCSR363ASY_ChIP_ZNF629_HepG2_ENCSR465FQP_counts_pattern_2.n_304-vs-ZNF629-201.alignment counts-znf_b1h_alignment/ZNF629-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF629-201/pos_patterns.ENCSR363ASY_ChIP_ZNF629_HepG2_ENCSR465FQP_counts_pattern_3.n_251-vs-ZNF629-201.alignment counts-znf_b1h_alignment/ZNF629-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF629-201/pos_patterns.ENCSR363ASY_ChIP_ZNF629_HepG2_ENCSR465FQP_counts_pattern_4.n_99-vs-ZNF629-201.alignment counts-znf_b1h_alignment/ZNF629-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF629-201/pos_patterns.ENCSR363ASY_ChIP_ZNF629_HepG2_ENCSR465FQP_counts_pattern_5.n_85-vs-ZNF629-201.alignment counts-znf_b1h_alignment/ZNF629-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF629-201/pos_patterns.ENCSR363ASY_ChIP_ZNF629_HepG2_ENCSR465FQP_counts_pattern_6.n_23-vs-ZNF629-201.alignment counts-znf_b1h_alignment/ZNF629-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/neg_patterns.ENCSR258PSN_ChIP_ZNF639_K562_ENCSR248ZZL_counts_pattern_0.n_409-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/neg_patterns.ENCSR258PSN_ChIP_ZNF639_K562_ENCSR248ZZL_counts_pattern_1.n_96-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/neg_patterns.ENCSR258PSN_ChIP_ZNF639_K562_ENCSR248ZZL_counts_pattern_2.n_37-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/neg_patterns.ENCSR949NVY_ChIP_ZNF639_K562_ENCSR604XQT_counts_pattern_0.n_21-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR080CST_ChIP_ZNF639_HEK293_ENCSR310ZJL_counts_pattern_0.n_3411-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR080CST_ChIP_ZNF639_HEK293_ENCSR310ZJL_counts_pattern_1.n_2475-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR080CST_ChIP_ZNF639_HEK293_ENCSR310ZJL_counts_pattern_2.n_907-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR080CST_ChIP_ZNF639_HEK293_ENCSR310ZJL_counts_pattern_3.n_847-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR080CST_ChIP_ZNF639_HEK293_ENCSR310ZJL_counts_pattern_4.n_487-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR080CST_ChIP_ZNF639_HEK293_ENCSR310ZJL_counts_pattern_5.n_230-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR080CST_ChIP_ZNF639_HEK293_ENCSR310ZJL_counts_pattern_6.n_119-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR080CST_ChIP_ZNF639_HEK293_ENCSR310ZJL_counts_pattern_7.n_116-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR258PSN_ChIP_ZNF639_K562_ENCSR248ZZL_counts_pattern_0.n_76-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR258PSN_ChIP_ZNF639_K562_ENCSR248ZZL_counts_pattern_10.n_21-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR258PSN_ChIP_ZNF639_K562_ENCSR248ZZL_counts_pattern_1.n_61-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR258PSN_ChIP_ZNF639_K562_ENCSR248ZZL_counts_pattern_2.n_59-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR258PSN_ChIP_ZNF639_K562_ENCSR248ZZL_counts_pattern_3.n_54-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR258PSN_ChIP_ZNF639_K562_ENCSR248ZZL_counts_pattern_4.n_45-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR258PSN_ChIP_ZNF639_K562_ENCSR248ZZL_counts_pattern_5.n_44-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR258PSN_ChIP_ZNF639_K562_ENCSR248ZZL_counts_pattern_6.n_39-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR258PSN_ChIP_ZNF639_K562_ENCSR248ZZL_counts_pattern_7.n_34-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR258PSN_ChIP_ZNF639_K562_ENCSR248ZZL_counts_pattern_8.n_33-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR258PSN_ChIP_ZNF639_K562_ENCSR248ZZL_counts_pattern_9.n_31-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR497VFH_ChIP_ZNF639_K562_ENCSR276YPM_counts_pattern_0.n_771-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR497VFH_ChIP_ZNF639_K562_ENCSR276YPM_counts_pattern_1.n_582-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR497VFH_ChIP_ZNF639_K562_ENCSR276YPM_counts_pattern_2.n_577-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR497VFH_ChIP_ZNF639_K562_ENCSR276YPM_counts_pattern_3.n_521-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR497VFH_ChIP_ZNF639_K562_ENCSR276YPM_counts_pattern_4.n_197-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR497VFH_ChIP_ZNF639_K562_ENCSR276YPM_counts_pattern_5.n_163-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR497VFH_ChIP_ZNF639_K562_ENCSR276YPM_counts_pattern_6.n_141-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR497VFH_ChIP_ZNF639_K562_ENCSR276YPM_counts_pattern_7.n_49-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR497VFH_ChIP_ZNF639_K562_ENCSR276YPM_counts_pattern_8.n_37-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR665UFC_ChIP_ZNF639_HepG2_ENCSR246NJE_counts_pattern_0.n_2291-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR665UFC_ChIP_ZNF639_HepG2_ENCSR246NJE_counts_pattern_10.n_175-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR665UFC_ChIP_ZNF639_HepG2_ENCSR246NJE_counts_pattern_11.n_175-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR665UFC_ChIP_ZNF639_HepG2_ENCSR246NJE_counts_pattern_12.n_164-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR665UFC_ChIP_ZNF639_HepG2_ENCSR246NJE_counts_pattern_13.n_163-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR665UFC_ChIP_ZNF639_HepG2_ENCSR246NJE_counts_pattern_14.n_157-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR665UFC_ChIP_ZNF639_HepG2_ENCSR246NJE_counts_pattern_15.n_140-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR665UFC_ChIP_ZNF639_HepG2_ENCSR246NJE_counts_pattern_16.n_127-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR665UFC_ChIP_ZNF639_HepG2_ENCSR246NJE_counts_pattern_17.n_116-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR665UFC_ChIP_ZNF639_HepG2_ENCSR246NJE_counts_pattern_18.n_102-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR665UFC_ChIP_ZNF639_HepG2_ENCSR246NJE_counts_pattern_19.n_91-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR665UFC_ChIP_ZNF639_HepG2_ENCSR246NJE_counts_pattern_1.n_1076-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR665UFC_ChIP_ZNF639_HepG2_ENCSR246NJE_counts_pattern_20.n_90-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR665UFC_ChIP_ZNF639_HepG2_ENCSR246NJE_counts_pattern_21.n_66-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR665UFC_ChIP_ZNF639_HepG2_ENCSR246NJE_counts_pattern_2.n_1074-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR665UFC_ChIP_ZNF639_HepG2_ENCSR246NJE_counts_pattern_3.n_733-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR665UFC_ChIP_ZNF639_HepG2_ENCSR246NJE_counts_pattern_4.n_695-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR665UFC_ChIP_ZNF639_HepG2_ENCSR246NJE_counts_pattern_5.n_692-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR665UFC_ChIP_ZNF639_HepG2_ENCSR246NJE_counts_pattern_6.n_322-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR665UFC_ChIP_ZNF639_HepG2_ENCSR246NJE_counts_pattern_7.n_314-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR665UFC_ChIP_ZNF639_HepG2_ENCSR246NJE_counts_pattern_8.n_259-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR665UFC_ChIP_ZNF639_HepG2_ENCSR246NJE_counts_pattern_9.n_234-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR845BCL_ChIP_ZNF639_K562_ENCSR144EUX_counts_pattern_0.n_6216-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR845BCL_ChIP_ZNF639_K562_ENCSR144EUX_counts_pattern_10.n_222-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR845BCL_ChIP_ZNF639_K562_ENCSR144EUX_counts_pattern_11.n_206-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR845BCL_ChIP_ZNF639_K562_ENCSR144EUX_counts_pattern_12.n_152-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR845BCL_ChIP_ZNF639_K562_ENCSR144EUX_counts_pattern_13.n_127-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR845BCL_ChIP_ZNF639_K562_ENCSR144EUX_counts_pattern_14.n_122-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR845BCL_ChIP_ZNF639_K562_ENCSR144EUX_counts_pattern_15.n_117-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR845BCL_ChIP_ZNF639_K562_ENCSR144EUX_counts_pattern_16.n_54-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR845BCL_ChIP_ZNF639_K562_ENCSR144EUX_counts_pattern_17.n_48-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR845BCL_ChIP_ZNF639_K562_ENCSR144EUX_counts_pattern_18.n_32-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR845BCL_ChIP_ZNF639_K562_ENCSR144EUX_counts_pattern_1.n_2485-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR845BCL_ChIP_ZNF639_K562_ENCSR144EUX_counts_pattern_2.n_2089-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR845BCL_ChIP_ZNF639_K562_ENCSR144EUX_counts_pattern_3.n_1420-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR845BCL_ChIP_ZNF639_K562_ENCSR144EUX_counts_pattern_4.n_1360-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR845BCL_ChIP_ZNF639_K562_ENCSR144EUX_counts_pattern_5.n_944-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR845BCL_ChIP_ZNF639_K562_ENCSR144EUX_counts_pattern_6.n_771-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR845BCL_ChIP_ZNF639_K562_ENCSR144EUX_counts_pattern_7.n_695-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR845BCL_ChIP_ZNF639_K562_ENCSR144EUX_counts_pattern_8.n_327-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR845BCL_ChIP_ZNF639_K562_ENCSR144EUX_counts_pattern_9.n_241-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR949NVY_ChIP_ZNF639_K562_ENCSR604XQT_counts_pattern_0.n_4276-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR949NVY_ChIP_ZNF639_K562_ENCSR604XQT_counts_pattern_1.n_2767-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR949NVY_ChIP_ZNF639_K562_ENCSR604XQT_counts_pattern_2.n_193-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR949NVY_ChIP_ZNF639_K562_ENCSR604XQT_counts_pattern_3.n_167-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR949NVY_ChIP_ZNF639_K562_ENCSR604XQT_counts_pattern_4.n_140-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR949NVY_ChIP_ZNF639_K562_ENCSR604XQT_counts_pattern_5.n_123-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR949NVY_ChIP_ZNF639_K562_ENCSR604XQT_counts_pattern_6.n_49-vs-ZNF639-201.alignment counts-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF641-201/ChipExo_models_ZNF641_counts-pos.pattern_0.n_238-vs-ZNF641-201.alignment counts-znf_b1h_alignment/ZNF641-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF641-201/ChipExo_models_ZNF641_counts-pos.pattern_1.n_194-vs-ZNF641-201.alignment counts-znf_b1h_alignment/ZNF641-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_counts_pattern_0.n_7228-vs-ZNF644-201.alignment counts-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_counts_pattern_10.n_349-vs-ZNF644-201.alignment counts-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_counts_pattern_11.n_344-vs-ZNF644-201.alignment counts-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_counts_pattern_12.n_273-vs-ZNF644-201.alignment counts-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_counts_pattern_13.n_105-vs-ZNF644-201.alignment counts-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_counts_pattern_14.n_26-vs-ZNF644-201.alignment counts-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_counts_pattern_15.n_23-vs-ZNF644-201.alignment counts-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_counts_pattern_16.n_21-vs-ZNF644-201.alignment counts-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_counts_pattern_17.n_20-vs-ZNF644-201.alignment counts-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_counts_pattern_1.n_3681-vs-ZNF644-201.alignment counts-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_counts_pattern_2.n_2587-vs-ZNF644-201.alignment counts-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_counts_pattern_3.n_2189-vs-ZNF644-201.alignment counts-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_counts_pattern_4.n_1871-vs-ZNF644-201.alignment counts-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_counts_pattern_5.n_988-vs-ZNF644-201.alignment counts-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_counts_pattern_6.n_885-vs-ZNF644-201.alignment counts-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_counts_pattern_7.n_673-vs-ZNF644-201.alignment counts-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_counts_pattern_8.n_609-vs-ZNF644-201.alignment counts-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_counts_pattern_9.n_453-vs-ZNF644-201.alignment counts-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_counts_pattern_0.n_4907-vs-ZNF644-201.alignment counts-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_counts_pattern_1.n_1430-vs-ZNF644-201.alignment counts-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_counts_pattern_2.n_1075-vs-ZNF644-201.alignment counts-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_counts_pattern_3.n_748-vs-ZNF644-201.alignment counts-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_counts_pattern_4.n_707-vs-ZNF644-201.alignment counts-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_counts_pattern_5.n_663-vs-ZNF644-201.alignment counts-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_counts_pattern_6.n_306-vs-ZNF644-201.alignment counts-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_counts_pattern_7.n_283-vs-ZNF644-201.alignment counts-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_counts_pattern_8.n_21-vs-ZNF644-201.alignment counts-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_counts_pattern_0.n_7228-vs-ZNF644-212.alignment counts-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_counts_pattern_10.n_349-vs-ZNF644-212.alignment counts-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_counts_pattern_11.n_344-vs-ZNF644-212.alignment counts-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_counts_pattern_12.n_273-vs-ZNF644-212.alignment counts-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_counts_pattern_13.n_105-vs-ZNF644-212.alignment counts-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_counts_pattern_14.n_26-vs-ZNF644-212.alignment counts-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_counts_pattern_15.n_23-vs-ZNF644-212.alignment counts-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_counts_pattern_16.n_21-vs-ZNF644-212.alignment counts-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_counts_pattern_17.n_20-vs-ZNF644-212.alignment counts-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_counts_pattern_1.n_3681-vs-ZNF644-212.alignment counts-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_counts_pattern_2.n_2587-vs-ZNF644-212.alignment counts-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_counts_pattern_3.n_2189-vs-ZNF644-212.alignment counts-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_counts_pattern_4.n_1871-vs-ZNF644-212.alignment counts-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_counts_pattern_5.n_988-vs-ZNF644-212.alignment counts-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_counts_pattern_6.n_885-vs-ZNF644-212.alignment counts-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_counts_pattern_7.n_673-vs-ZNF644-212.alignment counts-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_counts_pattern_8.n_609-vs-ZNF644-212.alignment counts-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_counts_pattern_9.n_453-vs-ZNF644-212.alignment counts-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_counts_pattern_0.n_4907-vs-ZNF644-212.alignment counts-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_counts_pattern_1.n_1430-vs-ZNF644-212.alignment counts-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_counts_pattern_2.n_1075-vs-ZNF644-212.alignment counts-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_counts_pattern_3.n_748-vs-ZNF644-212.alignment counts-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_counts_pattern_4.n_707-vs-ZNF644-212.alignment counts-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_counts_pattern_5.n_663-vs-ZNF644-212.alignment counts-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_counts_pattern_6.n_306-vs-ZNF644-212.alignment counts-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_counts_pattern_7.n_283-vs-ZNF644-212.alignment counts-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_counts_pattern_8.n_21-vs-ZNF644-212.alignment counts-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF646-201/pos_patterns.ENCSR488ZNK_ChIP_ZNF646_HepG2_ENCSR246WPX_counts_pattern_0.n_2535-vs-ZNF646-201.alignment counts-znf_b1h_alignment/ZNF646-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF646-201/pos_patterns.ENCSR488ZNK_ChIP_ZNF646_HepG2_ENCSR246WPX_counts_pattern_1.n_1841-vs-ZNF646-201.alignment counts-znf_b1h_alignment/ZNF646-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF646-201/pos_patterns.ENCSR488ZNK_ChIP_ZNF646_HepG2_ENCSR246WPX_counts_pattern_2.n_494-vs-ZNF646-201.alignment counts-znf_b1h_alignment/ZNF646-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF646-201/pos_patterns.ENCSR488ZNK_ChIP_ZNF646_HepG2_ENCSR246WPX_counts_pattern_3.n_441-vs-ZNF646-201.alignment counts-znf_b1h_alignment/ZNF646-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF646-201/pos_patterns.ENCSR488ZNK_ChIP_ZNF646_HepG2_ENCSR246WPX_counts_pattern_4.n_271-vs-ZNF646-201.alignment counts-znf_b1h_alignment/ZNF646-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF646-201/pos_patterns.ENCSR488ZNK_ChIP_ZNF646_HepG2_ENCSR246WPX_counts_pattern_5.n_246-vs-ZNF646-201.alignment counts-znf_b1h_alignment/ZNF646-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF646-201/pos_patterns.ENCSR488ZNK_ChIP_ZNF646_HepG2_ENCSR246WPX_counts_pattern_6.n_125-vs-ZNF646-201.alignment counts-znf_b1h_alignment/ZNF646-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF646-201/pos_patterns.ENCSR488ZNK_ChIP_ZNF646_HepG2_ENCSR246WPX_counts_pattern_7.n_56-vs-ZNF646-201.alignment counts-znf_b1h_alignment/ZNF646-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF646-201/pos_patterns.ENCSR488ZNK_ChIP_ZNF646_HepG2_ENCSR246WPX_counts_pattern_8.n_31-vs-ZNF646-201.alignment counts-znf_b1h_alignment/ZNF646-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF649-201/ChipExo_models_ZNF649_counts-neg.pattern_0.n_46-vs-ZNF649-201.alignment counts-znf_b1h_alignment/ZNF649-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF649-201/ChipExo_models_ZNF649_counts-neg.pattern_1.n_37-vs-ZNF649-201.alignment counts-znf_b1h_alignment/ZNF649-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF649-201/ChipExo_models_ZNF649_counts-neg.pattern_2.n_22-vs-ZNF649-201.alignment counts-znf_b1h_alignment/ZNF649-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF649-201/ChipExo_models_ZNF649_counts-pos.pattern_0.n_1215-vs-ZNF649-201.alignment counts-znf_b1h_alignment/ZNF649-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF649-201/ChipExo_models_ZNF649_counts-pos.pattern_10.n_73-vs-ZNF649-201.alignment counts-znf_b1h_alignment/ZNF649-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF649-201/ChipExo_models_ZNF649_counts-pos.pattern_11.n_59-vs-ZNF649-201.alignment counts-znf_b1h_alignment/ZNF649-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF649-201/ChipExo_models_ZNF649_counts-pos.pattern_12.n_45-vs-ZNF649-201.alignment counts-znf_b1h_alignment/ZNF649-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF649-201/ChipExo_models_ZNF649_counts-pos.pattern_13.n_34-vs-ZNF649-201.alignment counts-znf_b1h_alignment/ZNF649-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF649-201/ChipExo_models_ZNF649_counts-pos.pattern_14.n_24-vs-ZNF649-201.alignment counts-znf_b1h_alignment/ZNF649-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF649-201/ChipExo_models_ZNF649_counts-pos.pattern_15.n_22-vs-ZNF649-201.alignment counts-znf_b1h_alignment/ZNF649-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF649-201/ChipExo_models_ZNF649_counts-pos.pattern_1.n_394-vs-ZNF649-201.alignment counts-znf_b1h_alignment/ZNF649-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF649-201/ChipExo_models_ZNF649_counts-pos.pattern_2.n_328-vs-ZNF649-201.alignment counts-znf_b1h_alignment/ZNF649-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF649-201/ChipExo_models_ZNF649_counts-pos.pattern_3.n_318-vs-ZNF649-201.alignment counts-znf_b1h_alignment/ZNF649-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF649-201/ChipExo_models_ZNF649_counts-pos.pattern_4.n_273-vs-ZNF649-201.alignment counts-znf_b1h_alignment/ZNF649-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF649-201/ChipExo_models_ZNF649_counts-pos.pattern_5.n_167-vs-ZNF649-201.alignment counts-znf_b1h_alignment/ZNF649-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF649-201/ChipExo_models_ZNF649_counts-pos.pattern_6.n_152-vs-ZNF649-201.alignment counts-znf_b1h_alignment/ZNF649-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF649-201/ChipExo_models_ZNF649_counts-pos.pattern_7.n_121-vs-ZNF649-201.alignment counts-znf_b1h_alignment/ZNF649-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF649-201/ChipExo_models_ZNF649_counts-pos.pattern_8.n_120-vs-ZNF649-201.alignment counts-znf_b1h_alignment/ZNF649-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF649-201/ChipExo_models_ZNF649_counts-pos.pattern_9.n_118-vs-ZNF649-201.alignment counts-znf_b1h_alignment/ZNF649-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF649-207/ChipExo_models_ZNF649_counts-neg.pattern_0.n_46-vs-ZNF649-207.alignment counts-znf_b1h_alignment/ZNF649-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF649-207/ChipExo_models_ZNF649_counts-neg.pattern_1.n_37-vs-ZNF649-207.alignment counts-znf_b1h_alignment/ZNF649-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF649-207/ChipExo_models_ZNF649_counts-neg.pattern_2.n_22-vs-ZNF649-207.alignment counts-znf_b1h_alignment/ZNF649-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF649-207/ChipExo_models_ZNF649_counts-pos.pattern_0.n_1215-vs-ZNF649-207.alignment counts-znf_b1h_alignment/ZNF649-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF649-207/ChipExo_models_ZNF649_counts-pos.pattern_10.n_73-vs-ZNF649-207.alignment counts-znf_b1h_alignment/ZNF649-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF649-207/ChipExo_models_ZNF649_counts-pos.pattern_11.n_59-vs-ZNF649-207.alignment counts-znf_b1h_alignment/ZNF649-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF649-207/ChipExo_models_ZNF649_counts-pos.pattern_12.n_45-vs-ZNF649-207.alignment counts-znf_b1h_alignment/ZNF649-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF649-207/ChipExo_models_ZNF649_counts-pos.pattern_13.n_34-vs-ZNF649-207.alignment counts-znf_b1h_alignment/ZNF649-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF649-207/ChipExo_models_ZNF649_counts-pos.pattern_14.n_24-vs-ZNF649-207.alignment counts-znf_b1h_alignment/ZNF649-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF649-207/ChipExo_models_ZNF649_counts-pos.pattern_15.n_22-vs-ZNF649-207.alignment counts-znf_b1h_alignment/ZNF649-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF649-207/ChipExo_models_ZNF649_counts-pos.pattern_1.n_394-vs-ZNF649-207.alignment counts-znf_b1h_alignment/ZNF649-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF649-207/ChipExo_models_ZNF649_counts-pos.pattern_2.n_328-vs-ZNF649-207.alignment counts-znf_b1h_alignment/ZNF649-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF649-207/ChipExo_models_ZNF649_counts-pos.pattern_3.n_318-vs-ZNF649-207.alignment counts-znf_b1h_alignment/ZNF649-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF649-207/ChipExo_models_ZNF649_counts-pos.pattern_4.n_273-vs-ZNF649-207.alignment counts-znf_b1h_alignment/ZNF649-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF649-207/ChipExo_models_ZNF649_counts-pos.pattern_5.n_167-vs-ZNF649-207.alignment counts-znf_b1h_alignment/ZNF649-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF649-207/ChipExo_models_ZNF649_counts-pos.pattern_6.n_152-vs-ZNF649-207.alignment counts-znf_b1h_alignment/ZNF649-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF649-207/ChipExo_models_ZNF649_counts-pos.pattern_7.n_121-vs-ZNF649-207.alignment counts-znf_b1h_alignment/ZNF649-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF649-207/ChipExo_models_ZNF649_counts-pos.pattern_8.n_120-vs-ZNF649-207.alignment counts-znf_b1h_alignment/ZNF649-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF649-207/ChipExo_models_ZNF649_counts-pos.pattern_9.n_118-vs-ZNF649-207.alignment counts-znf_b1h_alignment/ZNF649-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF652-201/pos_patterns.ENCSR502GAX_ChIP_ZNF652_HepG2_ENCSR598EEN_counts_pattern_0.n_9211-vs-ZNF652-201.alignment counts-znf_b1h_alignment/ZNF652-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF652-201/pos_patterns.ENCSR502GAX_ChIP_ZNF652_HepG2_ENCSR598EEN_counts_pattern_1.n_1807-vs-ZNF652-201.alignment counts-znf_b1h_alignment/ZNF652-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF652-201/pos_patterns.ENCSR502GAX_ChIP_ZNF652_HepG2_ENCSR598EEN_counts_pattern_2.n_1347-vs-ZNF652-201.alignment counts-znf_b1h_alignment/ZNF652-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF652-201/pos_patterns.ENCSR502GAX_ChIP_ZNF652_HepG2_ENCSR598EEN_counts_pattern_3.n_728-vs-ZNF652-201.alignment counts-znf_b1h_alignment/ZNF652-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF652-201/pos_patterns.ENCSR502GAX_ChIP_ZNF652_HepG2_ENCSR598EEN_counts_pattern_4.n_420-vs-ZNF652-201.alignment counts-znf_b1h_alignment/ZNF652-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF652-201/pos_patterns.ENCSR502GAX_ChIP_ZNF652_HepG2_ENCSR598EEN_counts_pattern_5.n_234-vs-ZNF652-201.alignment counts-znf_b1h_alignment/ZNF652-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF652-201/pos_patterns.ENCSR502GAX_ChIP_ZNF652_HepG2_ENCSR598EEN_counts_pattern_6.n_94-vs-ZNF652-201.alignment counts-znf_b1h_alignment/ZNF652-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF652-201/pos_patterns.ENCSR502GAX_ChIP_ZNF652_HepG2_ENCSR598EEN_counts_pattern_7.n_37-vs-ZNF652-201.alignment counts-znf_b1h_alignment/ZNF652-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF652-201/pos_patterns.ENCSR502GAX_ChIP_ZNF652_HepG2_ENCSR598EEN_counts_pattern_8.n_34-vs-ZNF652-201.alignment counts-znf_b1h_alignment/ZNF652-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF652-201/pos_patterns.ENCSR502GAX_ChIP_ZNF652_HepG2_ENCSR598EEN_counts_pattern_9.n_27-vs-ZNF652-201.alignment counts-znf_b1h_alignment/ZNF652-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF654-201/pos_patterns.ENCSR504VDV_ChIP_ZNF654_HEK293_ENCSR464QSA_counts_pattern_0.n_15427-vs-ZNF654-201.alignment counts-znf_b1h_alignment/ZNF654-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF654-201/pos_patterns.ENCSR504VDV_ChIP_ZNF654_HEK293_ENCSR464QSA_counts_pattern_1.n_3565-vs-ZNF654-201.alignment counts-znf_b1h_alignment/ZNF654-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF654-201/pos_patterns.ENCSR504VDV_ChIP_ZNF654_HEK293_ENCSR464QSA_counts_pattern_2.n_142-vs-ZNF654-201.alignment counts-znf_b1h_alignment/ZNF654-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF654-201/pos_patterns.ENCSR504VDV_ChIP_ZNF654_HEK293_ENCSR464QSA_counts_pattern_3.n_113-vs-ZNF654-201.alignment counts-znf_b1h_alignment/ZNF654-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF654-201/pos_patterns.ENCSR504VDV_ChIP_ZNF654_HEK293_ENCSR464QSA_counts_pattern_4.n_103-vs-ZNF654-201.alignment counts-znf_b1h_alignment/ZNF654-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF654-201/pos_patterns.ENCSR504VDV_ChIP_ZNF654_HEK293_ENCSR464QSA_counts_pattern_5.n_101-vs-ZNF654-201.alignment counts-znf_b1h_alignment/ZNF654-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF654-201/pos_patterns.ENCSR504VDV_ChIP_ZNF654_HEK293_ENCSR464QSA_counts_pattern_6.n_86-vs-ZNF654-201.alignment counts-znf_b1h_alignment/ZNF654-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF654-201/pos_patterns.ENCSR504VDV_ChIP_ZNF654_HEK293_ENCSR464QSA_counts_pattern_7.n_62-vs-ZNF654-201.alignment counts-znf_b1h_alignment/ZNF654-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF654-201/pos_patterns.ENCSR504VDV_ChIP_ZNF654_HEK293_ENCSR464QSA_counts_pattern_8.n_40-vs-ZNF654-201.alignment counts-znf_b1h_alignment/ZNF654-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF654-201/pos_patterns.ENCSR504VDV_ChIP_ZNF654_HEK293_ENCSR464QSA_counts_pattern_9.n_30-vs-ZNF654-201.alignment counts-znf_b1h_alignment/ZNF654-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF654-204/pos_patterns.ENCSR504VDV_ChIP_ZNF654_HEK293_ENCSR464QSA_counts_pattern_0.n_15427-vs-ZNF654-204.alignment counts-znf_b1h_alignment/ZNF654-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF654-204/pos_patterns.ENCSR504VDV_ChIP_ZNF654_HEK293_ENCSR464QSA_counts_pattern_1.n_3565-vs-ZNF654-204.alignment counts-znf_b1h_alignment/ZNF654-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF654-204/pos_patterns.ENCSR504VDV_ChIP_ZNF654_HEK293_ENCSR464QSA_counts_pattern_2.n_142-vs-ZNF654-204.alignment counts-znf_b1h_alignment/ZNF654-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF654-204/pos_patterns.ENCSR504VDV_ChIP_ZNF654_HEK293_ENCSR464QSA_counts_pattern_3.n_113-vs-ZNF654-204.alignment counts-znf_b1h_alignment/ZNF654-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF654-204/pos_patterns.ENCSR504VDV_ChIP_ZNF654_HEK293_ENCSR464QSA_counts_pattern_4.n_103-vs-ZNF654-204.alignment counts-znf_b1h_alignment/ZNF654-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF654-204/pos_patterns.ENCSR504VDV_ChIP_ZNF654_HEK293_ENCSR464QSA_counts_pattern_5.n_101-vs-ZNF654-204.alignment counts-znf_b1h_alignment/ZNF654-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF654-204/pos_patterns.ENCSR504VDV_ChIP_ZNF654_HEK293_ENCSR464QSA_counts_pattern_6.n_86-vs-ZNF654-204.alignment counts-znf_b1h_alignment/ZNF654-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF654-204/pos_patterns.ENCSR504VDV_ChIP_ZNF654_HEK293_ENCSR464QSA_counts_pattern_7.n_62-vs-ZNF654-204.alignment counts-znf_b1h_alignment/ZNF654-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF654-204/pos_patterns.ENCSR504VDV_ChIP_ZNF654_HEK293_ENCSR464QSA_counts_pattern_8.n_40-vs-ZNF654-204.alignment counts-znf_b1h_alignment/ZNF654-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF654-204/pos_patterns.ENCSR504VDV_ChIP_ZNF654_HEK293_ENCSR464QSA_counts_pattern_9.n_30-vs-ZNF654-204.alignment counts-znf_b1h_alignment/ZNF654-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF655-201/neg_patterns.ENCSR568YNC_ChIP_ZNF655_K562_ENCSR422WTI_counts_pattern_0.n_31-vs-ZNF655-201.alignment counts-znf_b1h_alignment/ZNF655-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF655-201/neg_patterns.ENCSR568YNC_ChIP_ZNF655_K562_ENCSR422WTI_counts_pattern_10.n_20-vs-ZNF655-201.alignment counts-znf_b1h_alignment/ZNF655-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF655-201/neg_patterns.ENCSR568YNC_ChIP_ZNF655_K562_ENCSR422WTI_counts_pattern_1.n_26-vs-ZNF655-201.alignment counts-znf_b1h_alignment/ZNF655-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF655-201/neg_patterns.ENCSR568YNC_ChIP_ZNF655_K562_ENCSR422WTI_counts_pattern_2.n_26-vs-ZNF655-201.alignment counts-znf_b1h_alignment/ZNF655-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF655-201/neg_patterns.ENCSR568YNC_ChIP_ZNF655_K562_ENCSR422WTI_counts_pattern_3.n_26-vs-ZNF655-201.alignment counts-znf_b1h_alignment/ZNF655-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF655-201/neg_patterns.ENCSR568YNC_ChIP_ZNF655_K562_ENCSR422WTI_counts_pattern_4.n_23-vs-ZNF655-201.alignment counts-znf_b1h_alignment/ZNF655-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF655-201/neg_patterns.ENCSR568YNC_ChIP_ZNF655_K562_ENCSR422WTI_counts_pattern_5.n_23-vs-ZNF655-201.alignment counts-znf_b1h_alignment/ZNF655-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF655-201/neg_patterns.ENCSR568YNC_ChIP_ZNF655_K562_ENCSR422WTI_counts_pattern_6.n_23-vs-ZNF655-201.alignment counts-znf_b1h_alignment/ZNF655-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF655-201/neg_patterns.ENCSR568YNC_ChIP_ZNF655_K562_ENCSR422WTI_counts_pattern_7.n_22-vs-ZNF655-201.alignment counts-znf_b1h_alignment/ZNF655-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF655-201/neg_patterns.ENCSR568YNC_ChIP_ZNF655_K562_ENCSR422WTI_counts_pattern_8.n_22-vs-ZNF655-201.alignment counts-znf_b1h_alignment/ZNF655-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF655-201/neg_patterns.ENCSR568YNC_ChIP_ZNF655_K562_ENCSR422WTI_counts_pattern_9.n_22-vs-ZNF655-201.alignment counts-znf_b1h_alignment/ZNF655-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF655-201/pos_patterns.ENCSR568YNC_ChIP_ZNF655_K562_ENCSR422WTI_counts_pattern_0.n_336-vs-ZNF655-201.alignment counts-znf_b1h_alignment/ZNF655-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF655-201/pos_patterns.ENCSR568YNC_ChIP_ZNF655_K562_ENCSR422WTI_counts_pattern_1.n_223-vs-ZNF655-201.alignment counts-znf_b1h_alignment/ZNF655-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF655-201/pos_patterns.ENCSR568YNC_ChIP_ZNF655_K562_ENCSR422WTI_counts_pattern_2.n_29-vs-ZNF655-201.alignment counts-znf_b1h_alignment/ZNF655-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF655-201/pos_patterns.ENCSR568YNC_ChIP_ZNF655_K562_ENCSR422WTI_counts_pattern_3.n_22-vs-ZNF655-201.alignment counts-znf_b1h_alignment/ZNF655-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF655-201/pos_patterns.ENCSR568YNC_ChIP_ZNF655_K562_ENCSR422WTI_counts_pattern_4.n_21-vs-ZNF655-201.alignment counts-znf_b1h_alignment/ZNF655-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF658-201/pos_patterns.ENCSR762DQP_ChIP_ZNF658_HEK293_ENCSR305RPY_counts_pattern_0.n_138-vs-ZNF658-201.alignment counts-znf_b1h_alignment/ZNF658-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF658-201/pos_patterns.ENCSR762DQP_ChIP_ZNF658_HEK293_ENCSR305RPY_counts_pattern_1.n_80-vs-ZNF658-201.alignment counts-znf_b1h_alignment/ZNF658-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF658-201/pos_patterns.ENCSR762DQP_ChIP_ZNF658_HEK293_ENCSR305RPY_counts_pattern_2.n_55-vs-ZNF658-201.alignment counts-znf_b1h_alignment/ZNF658-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF658-201/pos_patterns.ENCSR762DQP_ChIP_ZNF658_HEK293_ENCSR305RPY_counts_pattern_3.n_21-vs-ZNF658-201.alignment counts-znf_b1h_alignment/ZNF658-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF658-207/pos_patterns.ENCSR762DQP_ChIP_ZNF658_HEK293_ENCSR305RPY_counts_pattern_0.n_138-vs-ZNF658-207.alignment counts-znf_b1h_alignment/ZNF658-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF658-207/pos_patterns.ENCSR762DQP_ChIP_ZNF658_HEK293_ENCSR305RPY_counts_pattern_1.n_80-vs-ZNF658-207.alignment counts-znf_b1h_alignment/ZNF658-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF658-207/pos_patterns.ENCSR762DQP_ChIP_ZNF658_HEK293_ENCSR305RPY_counts_pattern_2.n_55-vs-ZNF658-207.alignment counts-znf_b1h_alignment/ZNF658-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF658-207/pos_patterns.ENCSR762DQP_ChIP_ZNF658_HEK293_ENCSR305RPY_counts_pattern_3.n_21-vs-ZNF658-207.alignment counts-znf_b1h_alignment/ZNF658-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF660-201/pos_patterns.ENCSR283DOU_ChIP_ZNF660_HEK293_ENCSR216GEU_counts_pattern_0.n_6791-vs-ZNF660-201.alignment counts-znf_b1h_alignment/ZNF660-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF660-201/pos_patterns.ENCSR283DOU_ChIP_ZNF660_HEK293_ENCSR216GEU_counts_pattern_1.n_4427-vs-ZNF660-201.alignment counts-znf_b1h_alignment/ZNF660-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF660-201/pos_patterns.ENCSR283DOU_ChIP_ZNF660_HEK293_ENCSR216GEU_counts_pattern_2.n_2028-vs-ZNF660-201.alignment counts-znf_b1h_alignment/ZNF660-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF660-201/pos_patterns.ENCSR283DOU_ChIP_ZNF660_HEK293_ENCSR216GEU_counts_pattern_3.n_2015-vs-ZNF660-201.alignment counts-znf_b1h_alignment/ZNF660-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF660-201/pos_patterns.ENCSR283DOU_ChIP_ZNF660_HEK293_ENCSR216GEU_counts_pattern_4.n_1352-vs-ZNF660-201.alignment counts-znf_b1h_alignment/ZNF660-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF660-201/pos_patterns.ENCSR283DOU_ChIP_ZNF660_HEK293_ENCSR216GEU_counts_pattern_5.n_910-vs-ZNF660-201.alignment counts-znf_b1h_alignment/ZNF660-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF660-201/pos_patterns.ENCSR283DOU_ChIP_ZNF660_HEK293_ENCSR216GEU_counts_pattern_6.n_817-vs-ZNF660-201.alignment counts-znf_b1h_alignment/ZNF660-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF660-201/pos_patterns.ENCSR283DOU_ChIP_ZNF660_HEK293_ENCSR216GEU_counts_pattern_7.n_73-vs-ZNF660-201.alignment counts-znf_b1h_alignment/ZNF660-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF660-201/pos_patterns.ENCSR283DOU_ChIP_ZNF660_HEK293_ENCSR216GEU_counts_pattern_8.n_56-vs-ZNF660-201.alignment counts-znf_b1h_alignment/ZNF660-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF660-201/pos_patterns.ENCSR283DOU_ChIP_ZNF660_HEK293_ENCSR216GEU_counts_pattern_9.n_41-vs-ZNF660-201.alignment counts-znf_b1h_alignment/ZNF660-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF660-201/pos_patterns.ENCSR902AMJ_ChIP_ZNF660_HepG2_ENCSR137QJQ_counts_pattern_0.n_416-vs-ZNF660-201.alignment counts-znf_b1h_alignment/ZNF660-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF660-201/pos_patterns.ENCSR902AMJ_ChIP_ZNF660_HepG2_ENCSR137QJQ_counts_pattern_1.n_357-vs-ZNF660-201.alignment counts-znf_b1h_alignment/ZNF660-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF660-201/pos_patterns.ENCSR902AMJ_ChIP_ZNF660_HepG2_ENCSR137QJQ_counts_pattern_2.n_335-vs-ZNF660-201.alignment counts-znf_b1h_alignment/ZNF660-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF660-201/pos_patterns.ENCSR902AMJ_ChIP_ZNF660_HepG2_ENCSR137QJQ_counts_pattern_3.n_164-vs-ZNF660-201.alignment counts-znf_b1h_alignment/ZNF660-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF660-201/pos_patterns.ENCSR902AMJ_ChIP_ZNF660_HepG2_ENCSR137QJQ_counts_pattern_4.n_59-vs-ZNF660-201.alignment counts-znf_b1h_alignment/ZNF660-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF660-201/pos_patterns.ENCSR902AMJ_ChIP_ZNF660_HepG2_ENCSR137QJQ_counts_pattern_5.n_44-vs-ZNF660-201.alignment counts-znf_b1h_alignment/ZNF660-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF660-201/pos_patterns.ENCSR902AMJ_ChIP_ZNF660_HepG2_ENCSR137QJQ_counts_pattern_6.n_27-vs-ZNF660-201.alignment counts-znf_b1h_alignment/ZNF660-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF662-201/ChipExo_models_ZNF662_counts-pos.pattern_0.n_278-vs-ZNF662-201.alignment counts-znf_b1h_alignment/ZNF662-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF662-201/ChipExo_models_ZNF662_counts-pos.pattern_1.n_194-vs-ZNF662-201.alignment counts-znf_b1h_alignment/ZNF662-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF662-201/ChipExo_models_ZNF662_counts-pos.pattern_2.n_160-vs-ZNF662-201.alignment counts-znf_b1h_alignment/ZNF662-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF664-201/neg_patterns.ENCSR714LZQ_ChIP_ZNF664_HEK293_ENCSR782FWV_counts_pattern_0.n_24-vs-ZNF664-201.alignment counts-znf_b1h_alignment/ZNF664-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF664-201/neg_patterns.ENCSR714LZQ_ChIP_ZNF664_HEK293_ENCSR782FWV_counts_pattern_1.n_22-vs-ZNF664-201.alignment counts-znf_b1h_alignment/ZNF664-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF664-201/pos_patterns.ENCSR714LZQ_ChIP_ZNF664_HEK293_ENCSR782FWV_counts_pattern_0.n_12227-vs-ZNF664-201.alignment counts-znf_b1h_alignment/ZNF664-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF664-201/pos_patterns.ENCSR714LZQ_ChIP_ZNF664_HEK293_ENCSR782FWV_counts_pattern_1.n_7469-vs-ZNF664-201.alignment counts-znf_b1h_alignment/ZNF664-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF664-201/pos_patterns.ENCSR714LZQ_ChIP_ZNF664_HEK293_ENCSR782FWV_counts_pattern_2.n_3388-vs-ZNF664-201.alignment counts-znf_b1h_alignment/ZNF664-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF664-201/pos_patterns.ENCSR714LZQ_ChIP_ZNF664_HEK293_ENCSR782FWV_counts_pattern_3.n_26-vs-ZNF664-201.alignment counts-znf_b1h_alignment/ZNF664-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF667-201/ChipExo_models_ZNF667_counts-pos.pattern_0.n_167-vs-ZNF667-201.alignment counts-znf_b1h_alignment/ZNF667-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF667-201/ChipExo_models_ZNF667_counts-pos.pattern_1.n_22-vs-ZNF667-201.alignment counts-znf_b1h_alignment/ZNF667-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF667-201/Hughes_GR_models_ZNF667_counts-pos.pattern_0.n_51-vs-ZNF667-201.alignment counts-znf_b1h_alignment/ZNF667-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF667-201/Hughes_GR_models_ZNF667_counts-pos.pattern_1.n_29-vs-ZNF667-201.alignment counts-znf_b1h_alignment/ZNF667-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF667-201/Hughes_GR_models_ZNF667_counts-pos.pattern_2.n_22-vs-ZNF667-201.alignment counts-znf_b1h_alignment/ZNF667-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF667-201/Hughes_GR_models_ZNF667_counts-pos.pattern_3.n_21-vs-ZNF667-201.alignment counts-znf_b1h_alignment/ZNF667-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF668-201/pos_patterns.ENCSR682AAS_ChIP_ZNF668_K562_ENCSR699WOU_counts_pattern_0.n_1341-vs-ZNF668-201.alignment counts-znf_b1h_alignment/ZNF668-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF668-201/pos_patterns.ENCSR682AAS_ChIP_ZNF668_K562_ENCSR699WOU_counts_pattern_1.n_1232-vs-ZNF668-201.alignment counts-znf_b1h_alignment/ZNF668-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF668-201/pos_patterns.ENCSR682AAS_ChIP_ZNF668_K562_ENCSR699WOU_counts_pattern_2.n_354-vs-ZNF668-201.alignment counts-znf_b1h_alignment/ZNF668-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF668-201/pos_patterns.ENCSR682AAS_ChIP_ZNF668_K562_ENCSR699WOU_counts_pattern_3.n_169-vs-ZNF668-201.alignment counts-znf_b1h_alignment/ZNF668-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF668-201/pos_patterns.ENCSR682AAS_ChIP_ZNF668_K562_ENCSR699WOU_counts_pattern_4.n_46-vs-ZNF668-201.alignment counts-znf_b1h_alignment/ZNF668-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF668-201/pos_patterns.ENCSR682AAS_ChIP_ZNF668_K562_ENCSR699WOU_counts_pattern_5.n_41-vs-ZNF668-201.alignment counts-znf_b1h_alignment/ZNF668-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF669-201/ChipExo_models_ZNF669_counts-pos.pattern_0.n_182-vs-ZNF669-201.alignment counts-znf_b1h_alignment/ZNF669-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF669-201/ChipExo_models_ZNF669_counts-pos.pattern_1.n_24-vs-ZNF669-201.alignment counts-znf_b1h_alignment/ZNF669-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF669-201/Hughes_GR_models_ZNF669_counts-pos.pattern_0.n_60-vs-ZNF669-201.alignment counts-znf_b1h_alignment/ZNF669-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF669-201/Hughes_GR_models_ZNF669_counts-pos.pattern_1.n_31-vs-ZNF669-201.alignment counts-znf_b1h_alignment/ZNF669-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF669-201/Hughes_GR_models_ZNF669_counts-pos.pattern_2.n_31-vs-ZNF669-201.alignment counts-znf_b1h_alignment/ZNF669-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF669-201/Hughes_GR_models_ZNF669_counts-pos.pattern_3.n_26-vs-ZNF669-201.alignment counts-znf_b1h_alignment/ZNF669-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF669-201/Hughes_GR_models_ZNF669_counts-pos.pattern_4.n_24-vs-ZNF669-201.alignment counts-znf_b1h_alignment/ZNF669-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF669-201/Hughes_GR_models_ZNF669_counts-pos.pattern_5.n_21-vs-ZNF669-201.alignment counts-znf_b1h_alignment/ZNF669-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF669-201/Hughes_NB_models_ZNF669_counts-pos.pattern_0.n_45-vs-ZNF669-201.alignment counts-znf_b1h_alignment/ZNF669-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF669-201/Hughes_NB_models_ZNF669_counts-pos.pattern_1.n_44-vs-ZNF669-201.alignment counts-znf_b1h_alignment/ZNF669-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF669-201/Hughes_NB_models_ZNF669_counts-pos.pattern_2.n_34-vs-ZNF669-201.alignment counts-znf_b1h_alignment/ZNF669-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF669-201/Hughes_NB_models_ZNF669_counts-pos.pattern_3.n_32-vs-ZNF669-201.alignment counts-znf_b1h_alignment/ZNF669-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF669-201/Hughes_NB_models_ZNF669_counts-pos.pattern_4.n_28-vs-ZNF669-201.alignment counts-znf_b1h_alignment/ZNF669-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF669-201/Hughes_NB_models_ZNF669_counts-pos.pattern_5.n_25-vs-ZNF669-201.alignment counts-znf_b1h_alignment/ZNF669-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF669-204/ChipExo_models_ZNF669_counts-pos.pattern_0.n_182-vs-ZNF669-204.alignment counts-znf_b1h_alignment/ZNF669-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF669-204/ChipExo_models_ZNF669_counts-pos.pattern_1.n_24-vs-ZNF669-204.alignment counts-znf_b1h_alignment/ZNF669-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF669-204/Hughes_GR_models_ZNF669_counts-pos.pattern_0.n_60-vs-ZNF669-204.alignment counts-znf_b1h_alignment/ZNF669-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF669-204/Hughes_GR_models_ZNF669_counts-pos.pattern_1.n_31-vs-ZNF669-204.alignment counts-znf_b1h_alignment/ZNF669-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF669-204/Hughes_GR_models_ZNF669_counts-pos.pattern_2.n_31-vs-ZNF669-204.alignment counts-znf_b1h_alignment/ZNF669-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF669-204/Hughes_GR_models_ZNF669_counts-pos.pattern_3.n_26-vs-ZNF669-204.alignment counts-znf_b1h_alignment/ZNF669-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF669-204/Hughes_GR_models_ZNF669_counts-pos.pattern_4.n_24-vs-ZNF669-204.alignment counts-znf_b1h_alignment/ZNF669-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF669-204/Hughes_GR_models_ZNF669_counts-pos.pattern_5.n_21-vs-ZNF669-204.alignment counts-znf_b1h_alignment/ZNF669-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF669-204/Hughes_NB_models_ZNF669_counts-pos.pattern_0.n_45-vs-ZNF669-204.alignment counts-znf_b1h_alignment/ZNF669-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF669-204/Hughes_NB_models_ZNF669_counts-pos.pattern_1.n_44-vs-ZNF669-204.alignment counts-znf_b1h_alignment/ZNF669-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF669-204/Hughes_NB_models_ZNF669_counts-pos.pattern_2.n_34-vs-ZNF669-204.alignment counts-znf_b1h_alignment/ZNF669-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF669-204/Hughes_NB_models_ZNF669_counts-pos.pattern_3.n_32-vs-ZNF669-204.alignment counts-znf_b1h_alignment/ZNF669-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF669-204/Hughes_NB_models_ZNF669_counts-pos.pattern_4.n_28-vs-ZNF669-204.alignment counts-znf_b1h_alignment/ZNF669-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF669-204/Hughes_NB_models_ZNF669_counts-pos.pattern_5.n_25-vs-ZNF669-204.alignment counts-znf_b1h_alignment/ZNF669-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF670-201/pos_patterns.ENCSR233MWH_ChIP_ZNF670_HEK293_ENCSR044FML_counts_pattern_0.n_230-vs-ZNF670-201.alignment counts-znf_b1h_alignment/ZNF670-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF670-201/pos_patterns.ENCSR233MWH_ChIP_ZNF670_HEK293_ENCSR044FML_counts_pattern_1.n_91-vs-ZNF670-201.alignment counts-znf_b1h_alignment/ZNF670-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF670-201/pos_patterns.ENCSR233MWH_ChIP_ZNF670_HEK293_ENCSR044FML_counts_pattern_2.n_28-vs-ZNF670-201.alignment counts-znf_b1h_alignment/ZNF670-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF670-201/pos_patterns.ENCSR233MWH_ChIP_ZNF670_HEK293_ENCSR044FML_counts_pattern_3.n_23-vs-ZNF670-201.alignment counts-znf_b1h_alignment/ZNF670-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF670-201/pos_patterns.ENCSR699ZES_ChIP_ZNF670_HepG2_ENCSR947KVU_counts_pattern_0.n_2497-vs-ZNF670-201.alignment counts-znf_b1h_alignment/ZNF670-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF670-201/pos_patterns.ENCSR699ZES_ChIP_ZNF670_HepG2_ENCSR947KVU_counts_pattern_10.n_337-vs-ZNF670-201.alignment counts-znf_b1h_alignment/ZNF670-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF670-201/pos_patterns.ENCSR699ZES_ChIP_ZNF670_HepG2_ENCSR947KVU_counts_pattern_11.n_299-vs-ZNF670-201.alignment counts-znf_b1h_alignment/ZNF670-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF670-201/pos_patterns.ENCSR699ZES_ChIP_ZNF670_HepG2_ENCSR947KVU_counts_pattern_12.n_267-vs-ZNF670-201.alignment counts-znf_b1h_alignment/ZNF670-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF670-201/pos_patterns.ENCSR699ZES_ChIP_ZNF670_HepG2_ENCSR947KVU_counts_pattern_13.n_240-vs-ZNF670-201.alignment counts-znf_b1h_alignment/ZNF670-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF670-201/pos_patterns.ENCSR699ZES_ChIP_ZNF670_HepG2_ENCSR947KVU_counts_pattern_14.n_181-vs-ZNF670-201.alignment counts-znf_b1h_alignment/ZNF670-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF670-201/pos_patterns.ENCSR699ZES_ChIP_ZNF670_HepG2_ENCSR947KVU_counts_pattern_15.n_172-vs-ZNF670-201.alignment counts-znf_b1h_alignment/ZNF670-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF670-201/pos_patterns.ENCSR699ZES_ChIP_ZNF670_HepG2_ENCSR947KVU_counts_pattern_16.n_159-vs-ZNF670-201.alignment counts-znf_b1h_alignment/ZNF670-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF670-201/pos_patterns.ENCSR699ZES_ChIP_ZNF670_HepG2_ENCSR947KVU_counts_pattern_17.n_144-vs-ZNF670-201.alignment counts-znf_b1h_alignment/ZNF670-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF670-201/pos_patterns.ENCSR699ZES_ChIP_ZNF670_HepG2_ENCSR947KVU_counts_pattern_18.n_37-vs-ZNF670-201.alignment counts-znf_b1h_alignment/ZNF670-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF670-201/pos_patterns.ENCSR699ZES_ChIP_ZNF670_HepG2_ENCSR947KVU_counts_pattern_19.n_22-vs-ZNF670-201.alignment counts-znf_b1h_alignment/ZNF670-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF670-201/pos_patterns.ENCSR699ZES_ChIP_ZNF670_HepG2_ENCSR947KVU_counts_pattern_1.n_1825-vs-ZNF670-201.alignment counts-znf_b1h_alignment/ZNF670-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF670-201/pos_patterns.ENCSR699ZES_ChIP_ZNF670_HepG2_ENCSR947KVU_counts_pattern_20.n_21-vs-ZNF670-201.alignment counts-znf_b1h_alignment/ZNF670-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF670-201/pos_patterns.ENCSR699ZES_ChIP_ZNF670_HepG2_ENCSR947KVU_counts_pattern_2.n_1030-vs-ZNF670-201.alignment counts-znf_b1h_alignment/ZNF670-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF670-201/pos_patterns.ENCSR699ZES_ChIP_ZNF670_HepG2_ENCSR947KVU_counts_pattern_3.n_766-vs-ZNF670-201.alignment counts-znf_b1h_alignment/ZNF670-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF670-201/pos_patterns.ENCSR699ZES_ChIP_ZNF670_HepG2_ENCSR947KVU_counts_pattern_4.n_668-vs-ZNF670-201.alignment counts-znf_b1h_alignment/ZNF670-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF670-201/pos_patterns.ENCSR699ZES_ChIP_ZNF670_HepG2_ENCSR947KVU_counts_pattern_5.n_645-vs-ZNF670-201.alignment counts-znf_b1h_alignment/ZNF670-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF670-201/pos_patterns.ENCSR699ZES_ChIP_ZNF670_HepG2_ENCSR947KVU_counts_pattern_6.n_619-vs-ZNF670-201.alignment counts-znf_b1h_alignment/ZNF670-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF670-201/pos_patterns.ENCSR699ZES_ChIP_ZNF670_HepG2_ENCSR947KVU_counts_pattern_7.n_586-vs-ZNF670-201.alignment counts-znf_b1h_alignment/ZNF670-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF670-201/pos_patterns.ENCSR699ZES_ChIP_ZNF670_HepG2_ENCSR947KVU_counts_pattern_8.n_473-vs-ZNF670-201.alignment counts-znf_b1h_alignment/ZNF670-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF670-201/pos_patterns.ENCSR699ZES_ChIP_ZNF670_HepG2_ENCSR947KVU_counts_pattern_9.n_448-vs-ZNF670-201.alignment counts-znf_b1h_alignment/ZNF670-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF671-201/ChipExo_models_ZNF671_counts-pos.pattern_0.n_4065-vs-ZNF671-201.alignment counts-znf_b1h_alignment/ZNF671-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF671-201/ChipExo_models_ZNF671_counts-pos.pattern_1.n_338-vs-ZNF671-201.alignment counts-znf_b1h_alignment/ZNF671-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF671-201/ChipExo_models_ZNF671_counts-pos.pattern_2.n_202-vs-ZNF671-201.alignment counts-znf_b1h_alignment/ZNF671-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF671-201/ChipExo_models_ZNF671_counts-pos.pattern_3.n_32-vs-ZNF671-201.alignment counts-znf_b1h_alignment/ZNF671-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF671-201/neg_patterns.ENCSR260GQA_ChIP_ZNF671_WTC11_ENCSR008TMO_counts_pattern_0.n_580-vs-ZNF671-201.alignment counts-znf_b1h_alignment/ZNF671-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF671-201/neg_patterns.ENCSR260GQA_ChIP_ZNF671_WTC11_ENCSR008TMO_counts_pattern_10.n_35-vs-ZNF671-201.alignment counts-znf_b1h_alignment/ZNF671-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF671-201/neg_patterns.ENCSR260GQA_ChIP_ZNF671_WTC11_ENCSR008TMO_counts_pattern_11.n_26-vs-ZNF671-201.alignment counts-znf_b1h_alignment/ZNF671-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF671-201/neg_patterns.ENCSR260GQA_ChIP_ZNF671_WTC11_ENCSR008TMO_counts_pattern_12.n_20-vs-ZNF671-201.alignment counts-znf_b1h_alignment/ZNF671-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF671-201/neg_patterns.ENCSR260GQA_ChIP_ZNF671_WTC11_ENCSR008TMO_counts_pattern_1.n_404-vs-ZNF671-201.alignment counts-znf_b1h_alignment/ZNF671-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF671-201/neg_patterns.ENCSR260GQA_ChIP_ZNF671_WTC11_ENCSR008TMO_counts_pattern_2.n_318-vs-ZNF671-201.alignment counts-znf_b1h_alignment/ZNF671-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF671-201/neg_patterns.ENCSR260GQA_ChIP_ZNF671_WTC11_ENCSR008TMO_counts_pattern_3.n_140-vs-ZNF671-201.alignment counts-znf_b1h_alignment/ZNF671-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF671-201/neg_patterns.ENCSR260GQA_ChIP_ZNF671_WTC11_ENCSR008TMO_counts_pattern_4.n_105-vs-ZNF671-201.alignment counts-znf_b1h_alignment/ZNF671-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF671-201/neg_patterns.ENCSR260GQA_ChIP_ZNF671_WTC11_ENCSR008TMO_counts_pattern_5.n_88-vs-ZNF671-201.alignment counts-znf_b1h_alignment/ZNF671-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF671-201/neg_patterns.ENCSR260GQA_ChIP_ZNF671_WTC11_ENCSR008TMO_counts_pattern_6.n_83-vs-ZNF671-201.alignment counts-znf_b1h_alignment/ZNF671-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF671-201/neg_patterns.ENCSR260GQA_ChIP_ZNF671_WTC11_ENCSR008TMO_counts_pattern_7.n_77-vs-ZNF671-201.alignment counts-znf_b1h_alignment/ZNF671-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF671-201/neg_patterns.ENCSR260GQA_ChIP_ZNF671_WTC11_ENCSR008TMO_counts_pattern_8.n_55-vs-ZNF671-201.alignment counts-znf_b1h_alignment/ZNF671-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF671-201/neg_patterns.ENCSR260GQA_ChIP_ZNF671_WTC11_ENCSR008TMO_counts_pattern_9.n_43-vs-ZNF671-201.alignment counts-znf_b1h_alignment/ZNF671-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF671-201/pos_patterns.ENCSR260GQA_ChIP_ZNF671_WTC11_ENCSR008TMO_counts_pattern_0.n_860-vs-ZNF671-201.alignment counts-znf_b1h_alignment/ZNF671-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF671-201/pos_patterns.ENCSR260GQA_ChIP_ZNF671_WTC11_ENCSR008TMO_counts_pattern_1.n_298-vs-ZNF671-201.alignment counts-znf_b1h_alignment/ZNF671-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF671-201/pos_patterns.ENCSR260GQA_ChIP_ZNF671_WTC11_ENCSR008TMO_counts_pattern_2.n_165-vs-ZNF671-201.alignment counts-znf_b1h_alignment/ZNF671-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF671-201/pos_patterns.ENCSR260GQA_ChIP_ZNF671_WTC11_ENCSR008TMO_counts_pattern_3.n_105-vs-ZNF671-201.alignment counts-znf_b1h_alignment/ZNF671-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF671-201/pos_patterns.ENCSR260GQA_ChIP_ZNF671_WTC11_ENCSR008TMO_counts_pattern_4.n_60-vs-ZNF671-201.alignment counts-znf_b1h_alignment/ZNF671-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF671-201/pos_patterns.ENCSR260GQA_ChIP_ZNF671_WTC11_ENCSR008TMO_counts_pattern_5.n_32-vs-ZNF671-201.alignment counts-znf_b1h_alignment/ZNF671-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF672-201/pos_patterns.ENCSR263YXJ_ChIP_ZNF672_HepG2_ENCSR278LJT_counts_pattern_0.n_671-vs-ZNF672-201.alignment counts-znf_b1h_alignment/ZNF672-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF672-201/pos_patterns.ENCSR263YXJ_ChIP_ZNF672_HepG2_ENCSR278LJT_counts_pattern_10.n_93-vs-ZNF672-201.alignment counts-znf_b1h_alignment/ZNF672-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF672-201/pos_patterns.ENCSR263YXJ_ChIP_ZNF672_HepG2_ENCSR278LJT_counts_pattern_11.n_92-vs-ZNF672-201.alignment counts-znf_b1h_alignment/ZNF672-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF672-201/pos_patterns.ENCSR263YXJ_ChIP_ZNF672_HepG2_ENCSR278LJT_counts_pattern_12.n_74-vs-ZNF672-201.alignment counts-znf_b1h_alignment/ZNF672-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF672-201/pos_patterns.ENCSR263YXJ_ChIP_ZNF672_HepG2_ENCSR278LJT_counts_pattern_13.n_71-vs-ZNF672-201.alignment counts-znf_b1h_alignment/ZNF672-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF672-201/pos_patterns.ENCSR263YXJ_ChIP_ZNF672_HepG2_ENCSR278LJT_counts_pattern_14.n_65-vs-ZNF672-201.alignment counts-znf_b1h_alignment/ZNF672-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF672-201/pos_patterns.ENCSR263YXJ_ChIP_ZNF672_HepG2_ENCSR278LJT_counts_pattern_15.n_53-vs-ZNF672-201.alignment counts-znf_b1h_alignment/ZNF672-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF672-201/pos_patterns.ENCSR263YXJ_ChIP_ZNF672_HepG2_ENCSR278LJT_counts_pattern_16.n_51-vs-ZNF672-201.alignment counts-znf_b1h_alignment/ZNF672-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF672-201/pos_patterns.ENCSR263YXJ_ChIP_ZNF672_HepG2_ENCSR278LJT_counts_pattern_17.n_28-vs-ZNF672-201.alignment counts-znf_b1h_alignment/ZNF672-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF672-201/pos_patterns.ENCSR263YXJ_ChIP_ZNF672_HepG2_ENCSR278LJT_counts_pattern_18.n_21-vs-ZNF672-201.alignment counts-znf_b1h_alignment/ZNF672-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF672-201/pos_patterns.ENCSR263YXJ_ChIP_ZNF672_HepG2_ENCSR278LJT_counts_pattern_1.n_598-vs-ZNF672-201.alignment counts-znf_b1h_alignment/ZNF672-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF672-201/pos_patterns.ENCSR263YXJ_ChIP_ZNF672_HepG2_ENCSR278LJT_counts_pattern_2.n_296-vs-ZNF672-201.alignment counts-znf_b1h_alignment/ZNF672-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF672-201/pos_patterns.ENCSR263YXJ_ChIP_ZNF672_HepG2_ENCSR278LJT_counts_pattern_3.n_193-vs-ZNF672-201.alignment counts-znf_b1h_alignment/ZNF672-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF672-201/pos_patterns.ENCSR263YXJ_ChIP_ZNF672_HepG2_ENCSR278LJT_counts_pattern_4.n_174-vs-ZNF672-201.alignment counts-znf_b1h_alignment/ZNF672-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF672-201/pos_patterns.ENCSR263YXJ_ChIP_ZNF672_HepG2_ENCSR278LJT_counts_pattern_5.n_158-vs-ZNF672-201.alignment counts-znf_b1h_alignment/ZNF672-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF672-201/pos_patterns.ENCSR263YXJ_ChIP_ZNF672_HepG2_ENCSR278LJT_counts_pattern_6.n_152-vs-ZNF672-201.alignment counts-znf_b1h_alignment/ZNF672-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF672-201/pos_patterns.ENCSR263YXJ_ChIP_ZNF672_HepG2_ENCSR278LJT_counts_pattern_7.n_129-vs-ZNF672-201.alignment counts-znf_b1h_alignment/ZNF672-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF672-201/pos_patterns.ENCSR263YXJ_ChIP_ZNF672_HepG2_ENCSR278LJT_counts_pattern_8.n_124-vs-ZNF672-201.alignment counts-znf_b1h_alignment/ZNF672-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF672-201/pos_patterns.ENCSR263YXJ_ChIP_ZNF672_HepG2_ENCSR278LJT_counts_pattern_9.n_99-vs-ZNF672-201.alignment counts-znf_b1h_alignment/ZNF672-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF674-201/ChipExo_models_ZNF674_counts-pos.pattern_0.n_2631-vs-ZNF674-201.alignment counts-znf_b1h_alignment/ZNF674-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF674-201/ChipExo_models_ZNF674_counts-pos.pattern_1.n_1688-vs-ZNF674-201.alignment counts-znf_b1h_alignment/ZNF674-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF674-201/ChipExo_models_ZNF674_counts-pos.pattern_2.n_21-vs-ZNF674-201.alignment counts-znf_b1h_alignment/ZNF674-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF674-201/pos_patterns.ENCSR171BKT_ChIP_ZNF674_HepG2_ENCSR909ILI_counts_pattern_0.n_1242-vs-ZNF674-201.alignment counts-znf_b1h_alignment/ZNF674-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF674-201/pos_patterns.ENCSR171BKT_ChIP_ZNF674_HepG2_ENCSR909ILI_counts_pattern_10.n_152-vs-ZNF674-201.alignment counts-znf_b1h_alignment/ZNF674-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF674-201/pos_patterns.ENCSR171BKT_ChIP_ZNF674_HepG2_ENCSR909ILI_counts_pattern_11.n_145-vs-ZNF674-201.alignment counts-znf_b1h_alignment/ZNF674-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF674-201/pos_patterns.ENCSR171BKT_ChIP_ZNF674_HepG2_ENCSR909ILI_counts_pattern_12.n_106-vs-ZNF674-201.alignment counts-znf_b1h_alignment/ZNF674-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF674-201/pos_patterns.ENCSR171BKT_ChIP_ZNF674_HepG2_ENCSR909ILI_counts_pattern_13.n_95-vs-ZNF674-201.alignment counts-znf_b1h_alignment/ZNF674-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF674-201/pos_patterns.ENCSR171BKT_ChIP_ZNF674_HepG2_ENCSR909ILI_counts_pattern_14.n_91-vs-ZNF674-201.alignment counts-znf_b1h_alignment/ZNF674-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF674-201/pos_patterns.ENCSR171BKT_ChIP_ZNF674_HepG2_ENCSR909ILI_counts_pattern_15.n_62-vs-ZNF674-201.alignment counts-znf_b1h_alignment/ZNF674-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF674-201/pos_patterns.ENCSR171BKT_ChIP_ZNF674_HepG2_ENCSR909ILI_counts_pattern_16.n_57-vs-ZNF674-201.alignment counts-znf_b1h_alignment/ZNF674-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF674-201/pos_patterns.ENCSR171BKT_ChIP_ZNF674_HepG2_ENCSR909ILI_counts_pattern_17.n_44-vs-ZNF674-201.alignment counts-znf_b1h_alignment/ZNF674-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF674-201/pos_patterns.ENCSR171BKT_ChIP_ZNF674_HepG2_ENCSR909ILI_counts_pattern_1.n_1074-vs-ZNF674-201.alignment counts-znf_b1h_alignment/ZNF674-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF674-201/pos_patterns.ENCSR171BKT_ChIP_ZNF674_HepG2_ENCSR909ILI_counts_pattern_2.n_528-vs-ZNF674-201.alignment counts-znf_b1h_alignment/ZNF674-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF674-201/pos_patterns.ENCSR171BKT_ChIP_ZNF674_HepG2_ENCSR909ILI_counts_pattern_3.n_318-vs-ZNF674-201.alignment counts-znf_b1h_alignment/ZNF674-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF674-201/pos_patterns.ENCSR171BKT_ChIP_ZNF674_HepG2_ENCSR909ILI_counts_pattern_4.n_313-vs-ZNF674-201.alignment counts-znf_b1h_alignment/ZNF674-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF674-201/pos_patterns.ENCSR171BKT_ChIP_ZNF674_HepG2_ENCSR909ILI_counts_pattern_5.n_282-vs-ZNF674-201.alignment counts-znf_b1h_alignment/ZNF674-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF674-201/pos_patterns.ENCSR171BKT_ChIP_ZNF674_HepG2_ENCSR909ILI_counts_pattern_6.n_216-vs-ZNF674-201.alignment counts-znf_b1h_alignment/ZNF674-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF674-201/pos_patterns.ENCSR171BKT_ChIP_ZNF674_HepG2_ENCSR909ILI_counts_pattern_7.n_208-vs-ZNF674-201.alignment counts-znf_b1h_alignment/ZNF674-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF674-201/pos_patterns.ENCSR171BKT_ChIP_ZNF674_HepG2_ENCSR909ILI_counts_pattern_8.n_195-vs-ZNF674-201.alignment counts-znf_b1h_alignment/ZNF674-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF674-201/pos_patterns.ENCSR171BKT_ChIP_ZNF674_HepG2_ENCSR909ILI_counts_pattern_9.n_158-vs-ZNF674-201.alignment counts-znf_b1h_alignment/ZNF674-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF675-201/ChipExo_models_ZNF675_counts-pos.pattern_0.n_3330-vs-ZNF675-201.alignment counts-znf_b1h_alignment/ZNF675-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF675-201/ChipExo_models_ZNF675_counts-pos.pattern_1.n_1542-vs-ZNF675-201.alignment counts-znf_b1h_alignment/ZNF675-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF675-201/ChipExo_models_ZNF675_counts-pos.pattern_2.n_268-vs-ZNF675-201.alignment counts-znf_b1h_alignment/ZNF675-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF675-201/ChipExo_models_ZNF675_counts-pos.pattern_3.n_62-vs-ZNF675-201.alignment counts-znf_b1h_alignment/ZNF675-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF675-201/Hughes_NB_models_ZNF675_counts-pos.pattern_0.n_5102-vs-ZNF675-201.alignment counts-znf_b1h_alignment/ZNF675-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF675-201/Hughes_NB_models_ZNF675_counts-pos.pattern_1.n_1177-vs-ZNF675-201.alignment counts-znf_b1h_alignment/ZNF675-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF675-201/Hughes_NB_models_ZNF675_counts-pos.pattern_2.n_50-vs-ZNF675-201.alignment counts-znf_b1h_alignment/ZNF675-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF677-201/Hughes_GR_models_ZNF677_counts-pos.pattern_0.n_42-vs-ZNF677-201.alignment counts-znf_b1h_alignment/ZNF677-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF677-201/Hughes_GR_models_ZNF677_counts-pos.pattern_1.n_38-vs-ZNF677-201.alignment counts-znf_b1h_alignment/ZNF677-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF677-201/Hughes_GR_models_ZNF677_counts-pos.pattern_2.n_32-vs-ZNF677-201.alignment counts-znf_b1h_alignment/ZNF677-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF677-201/Hughes_GR_models_ZNF677_counts-pos.pattern_3.n_31-vs-ZNF677-201.alignment counts-znf_b1h_alignment/ZNF677-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF677-201/Hughes_GR_models_ZNF677_counts-pos.pattern_4.n_31-vs-ZNF677-201.alignment counts-znf_b1h_alignment/ZNF677-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF677-201/Hughes_GR_models_ZNF677_counts-pos.pattern_5.n_24-vs-ZNF677-201.alignment counts-znf_b1h_alignment/ZNF677-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF677-201/Hughes_GR_models_ZNF677_counts-pos.pattern_6.n_23-vs-ZNF677-201.alignment counts-znf_b1h_alignment/ZNF677-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF677-201/Hughes_GR_models_ZNF677_counts-pos.pattern_7.n_23-vs-ZNF677-201.alignment counts-znf_b1h_alignment/ZNF677-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF677-201/Hughes_GR_models_ZNF677_counts-pos.pattern_8.n_23-vs-ZNF677-201.alignment counts-znf_b1h_alignment/ZNF677-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF677-201/Hughes_GR_models_ZNF677_counts-pos.pattern_9.n_22-vs-ZNF677-201.alignment counts-znf_b1h_alignment/ZNF677-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF677-201/neg_patterns.ENCSR279KDC_ChIP_ZNF677_HEK293_ENCSR642ICI_counts_pattern_0.n_37-vs-ZNF677-201.alignment counts-znf_b1h_alignment/ZNF677-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF677-201/neg_patterns.ENCSR279KDC_ChIP_ZNF677_HEK293_ENCSR642ICI_counts_pattern_1.n_34-vs-ZNF677-201.alignment counts-znf_b1h_alignment/ZNF677-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF677-201/pos_patterns.ENCSR279KDC_ChIP_ZNF677_HEK293_ENCSR642ICI_counts_pattern_0.n_2731-vs-ZNF677-201.alignment counts-znf_b1h_alignment/ZNF677-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF677-201/pos_patterns.ENCSR279KDC_ChIP_ZNF677_HEK293_ENCSR642ICI_counts_pattern_1.n_591-vs-ZNF677-201.alignment counts-znf_b1h_alignment/ZNF677-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF677-201/pos_patterns.ENCSR279KDC_ChIP_ZNF677_HEK293_ENCSR642ICI_counts_pattern_2.n_318-vs-ZNF677-201.alignment counts-znf_b1h_alignment/ZNF677-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF677-201/pos_patterns.ENCSR279KDC_ChIP_ZNF677_HEK293_ENCSR642ICI_counts_pattern_3.n_259-vs-ZNF677-201.alignment counts-znf_b1h_alignment/ZNF677-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF677-201/pos_patterns.ENCSR279KDC_ChIP_ZNF677_HEK293_ENCSR642ICI_counts_pattern_4.n_180-vs-ZNF677-201.alignment counts-znf_b1h_alignment/ZNF677-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF677-201/pos_patterns.ENCSR279KDC_ChIP_ZNF677_HEK293_ENCSR642ICI_counts_pattern_5.n_85-vs-ZNF677-201.alignment counts-znf_b1h_alignment/ZNF677-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF677-201/pos_patterns.ENCSR279KDC_ChIP_ZNF677_HEK293_ENCSR642ICI_counts_pattern_6.n_64-vs-ZNF677-201.alignment counts-znf_b1h_alignment/ZNF677-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF678-201/pos_patterns.ENCSR946PKH_ChIP_ZNF678_HepG2_ENCSR169DPW_counts_pattern_0.n_4085-vs-ZNF678-201.alignment counts-znf_b1h_alignment/ZNF678-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF678-201/pos_patterns.ENCSR946PKH_ChIP_ZNF678_HepG2_ENCSR169DPW_counts_pattern_10.n_140-vs-ZNF678-201.alignment counts-znf_b1h_alignment/ZNF678-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF678-201/pos_patterns.ENCSR946PKH_ChIP_ZNF678_HepG2_ENCSR169DPW_counts_pattern_11.n_119-vs-ZNF678-201.alignment counts-znf_b1h_alignment/ZNF678-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF678-201/pos_patterns.ENCSR946PKH_ChIP_ZNF678_HepG2_ENCSR169DPW_counts_pattern_12.n_105-vs-ZNF678-201.alignment counts-znf_b1h_alignment/ZNF678-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF678-201/pos_patterns.ENCSR946PKH_ChIP_ZNF678_HepG2_ENCSR169DPW_counts_pattern_13.n_88-vs-ZNF678-201.alignment counts-znf_b1h_alignment/ZNF678-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF678-201/pos_patterns.ENCSR946PKH_ChIP_ZNF678_HepG2_ENCSR169DPW_counts_pattern_14.n_69-vs-ZNF678-201.alignment counts-znf_b1h_alignment/ZNF678-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF678-201/pos_patterns.ENCSR946PKH_ChIP_ZNF678_HepG2_ENCSR169DPW_counts_pattern_15.n_67-vs-ZNF678-201.alignment counts-znf_b1h_alignment/ZNF678-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF678-201/pos_patterns.ENCSR946PKH_ChIP_ZNF678_HepG2_ENCSR169DPW_counts_pattern_16.n_26-vs-ZNF678-201.alignment counts-znf_b1h_alignment/ZNF678-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF678-201/pos_patterns.ENCSR946PKH_ChIP_ZNF678_HepG2_ENCSR169DPW_counts_pattern_1.n_885-vs-ZNF678-201.alignment counts-znf_b1h_alignment/ZNF678-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF678-201/pos_patterns.ENCSR946PKH_ChIP_ZNF678_HepG2_ENCSR169DPW_counts_pattern_2.n_471-vs-ZNF678-201.alignment counts-znf_b1h_alignment/ZNF678-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF678-201/pos_patterns.ENCSR946PKH_ChIP_ZNF678_HepG2_ENCSR169DPW_counts_pattern_3.n_303-vs-ZNF678-201.alignment counts-znf_b1h_alignment/ZNF678-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF678-201/pos_patterns.ENCSR946PKH_ChIP_ZNF678_HepG2_ENCSR169DPW_counts_pattern_4.n_278-vs-ZNF678-201.alignment counts-znf_b1h_alignment/ZNF678-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF678-201/pos_patterns.ENCSR946PKH_ChIP_ZNF678_HepG2_ENCSR169DPW_counts_pattern_5.n_209-vs-ZNF678-201.alignment counts-znf_b1h_alignment/ZNF678-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF678-201/pos_patterns.ENCSR946PKH_ChIP_ZNF678_HepG2_ENCSR169DPW_counts_pattern_6.n_178-vs-ZNF678-201.alignment counts-znf_b1h_alignment/ZNF678-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF678-201/pos_patterns.ENCSR946PKH_ChIP_ZNF678_HepG2_ENCSR169DPW_counts_pattern_7.n_176-vs-ZNF678-201.alignment counts-znf_b1h_alignment/ZNF678-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF678-201/pos_patterns.ENCSR946PKH_ChIP_ZNF678_HepG2_ENCSR169DPW_counts_pattern_8.n_160-vs-ZNF678-201.alignment counts-znf_b1h_alignment/ZNF678-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF678-201/pos_patterns.ENCSR946PKH_ChIP_ZNF678_HepG2_ENCSR169DPW_counts_pattern_9.n_142-vs-ZNF678-201.alignment counts-znf_b1h_alignment/ZNF678-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF680-201/ChipExo_models_ZNF680_counts-pos.pattern_0.n_23793-vs-ZNF680-201.alignment counts-znf_b1h_alignment/ZNF680-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF680-201/ChipExo_models_ZNF680_counts-pos.pattern_1.n_1731-vs-ZNF680-201.alignment counts-znf_b1h_alignment/ZNF680-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF680-201/ChipExo_models_ZNF680_counts-pos.pattern_2.n_169-vs-ZNF680-201.alignment counts-znf_b1h_alignment/ZNF680-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF680-201/ChipExo_models_ZNF680_counts-pos.pattern_3.n_89-vs-ZNF680-201.alignment counts-znf_b1h_alignment/ZNF680-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF680-201/ChipExo_models_ZNF680_counts-pos.pattern_4.n_28-vs-ZNF680-201.alignment counts-znf_b1h_alignment/ZNF680-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF680-201/Hughes_GR_models_ZNF680_counts-pos.pattern_0.n_6968-vs-ZNF680-201.alignment counts-znf_b1h_alignment/ZNF680-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF680-201/Hughes_GR_models_ZNF680_counts-pos.pattern_1.n_223-vs-ZNF680-201.alignment counts-znf_b1h_alignment/ZNF680-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF680-201/Hughes_GR_models_ZNF680_counts-pos.pattern_2.n_98-vs-ZNF680-201.alignment counts-znf_b1h_alignment/ZNF680-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF680-201/Hughes_GR_models_ZNF680_counts-pos.pattern_3.n_29-vs-ZNF680-201.alignment counts-znf_b1h_alignment/ZNF680-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF680-201/Hughes_GR_models_ZNF680_counts-pos.pattern_4.n_20-vs-ZNF680-201.alignment counts-znf_b1h_alignment/ZNF680-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF680-201/neg_patterns.ENCSR307CKC_ChIP_ZNF680_HEK293_ENCSR285CBS_counts_pattern_0.n_24-vs-ZNF680-201.alignment counts-znf_b1h_alignment/ZNF680-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF680-201/pos_patterns.ENCSR307CKC_ChIP_ZNF680_HEK293_ENCSR285CBS_counts_pattern_0.n_7149-vs-ZNF680-201.alignment counts-znf_b1h_alignment/ZNF680-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF680-201/pos_patterns.ENCSR307CKC_ChIP_ZNF680_HEK293_ENCSR285CBS_counts_pattern_1.n_3267-vs-ZNF680-201.alignment counts-znf_b1h_alignment/ZNF680-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF680-201/pos_patterns.ENCSR307CKC_ChIP_ZNF680_HEK293_ENCSR285CBS_counts_pattern_2.n_199-vs-ZNF680-201.alignment counts-znf_b1h_alignment/ZNF680-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF680-201/pos_patterns.ENCSR307CKC_ChIP_ZNF680_HEK293_ENCSR285CBS_counts_pattern_3.n_186-vs-ZNF680-201.alignment counts-znf_b1h_alignment/ZNF680-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF680-201/pos_patterns.ENCSR307CKC_ChIP_ZNF680_HEK293_ENCSR285CBS_counts_pattern_4.n_131-vs-ZNF680-201.alignment counts-znf_b1h_alignment/ZNF680-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF680-201/pos_patterns.ENCSR307CKC_ChIP_ZNF680_HEK293_ENCSR285CBS_counts_pattern_5.n_53-vs-ZNF680-201.alignment counts-znf_b1h_alignment/ZNF680-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF680-201/pos_patterns.ENCSR307CKC_ChIP_ZNF680_HEK293_ENCSR285CBS_counts_pattern_6.n_51-vs-ZNF680-201.alignment counts-znf_b1h_alignment/ZNF680-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF680-201/pos_patterns.ENCSR307CKC_ChIP_ZNF680_HEK293_ENCSR285CBS_counts_pattern_7.n_27-vs-ZNF680-201.alignment counts-znf_b1h_alignment/ZNF680-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF681-201/ChipExo_models_ZNF681_counts-pos.pattern_0.n_363-vs-ZNF681-201.alignment counts-znf_b1h_alignment/ZNF681-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF681-201/ChipExo_models_ZNF681_counts-pos.pattern_1.n_42-vs-ZNF681-201.alignment counts-znf_b1h_alignment/ZNF681-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF681-201/ChipExo_models_ZNF681_counts-pos.pattern_2.n_41-vs-ZNF681-201.alignment counts-znf_b1h_alignment/ZNF681-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF681-201/ChipExo_models_ZNF681_counts-pos.pattern_3.n_34-vs-ZNF681-201.alignment counts-znf_b1h_alignment/ZNF681-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF682-201/ChipExo_models_ZNF682_counts-pos.pattern_0.n_1609-vs-ZNF682-201.alignment counts-znf_b1h_alignment/ZNF682-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF682-201/ChipExo_models_ZNF682_counts-pos.pattern_1.n_20-vs-ZNF682-201.alignment counts-znf_b1h_alignment/ZNF682-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF684-203/ChipExo_models_ZNF684_counts-pos.pattern_0.n_614-vs-ZNF684-203.alignment counts-znf_b1h_alignment/ZNF684-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF684-203/Hughes_NB_models_ZNF684_counts-pos.pattern_0.n_92-vs-ZNF684-203.alignment counts-znf_b1h_alignment/ZNF684-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF684-203/Hughes_NB_models_ZNF684_counts-pos.pattern_1.n_77-vs-ZNF684-203.alignment counts-znf_b1h_alignment/ZNF684-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF684-203/Hughes_NB_models_ZNF684_counts-pos.pattern_2.n_35-vs-ZNF684-203.alignment counts-znf_b1h_alignment/ZNF684-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/neg_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_0.n_56-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/neg_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_1.n_22-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_0.n_5361-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_10.n_1504-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_11.n_1337-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_12.n_1155-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_13.n_891-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_14.n_693-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_15.n_534-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_16.n_474-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_17.n_343-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_18.n_320-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_19.n_216-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_1.n_4506-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_20.n_185-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_21.n_157-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_22.n_156-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_23.n_121-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_24.n_68-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_25.n_54-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_26.n_47-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_27.n_44-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_28.n_41-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_29.n_28-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_2.n_2985-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_30.n_26-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_31.n_22-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_32.n_22-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_33.n_20-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_34.n_20-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_35.n_20-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_3.n_2496-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_4.n_2356-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_5.n_2350-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_6.n_2148-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_7.n_1939-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_8.n_1644-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_9.n_1604-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_0.n_3645-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_10.n_181-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_11.n_97-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_12.n_47-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_13.n_45-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_14.n_39-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_15.n_36-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_16.n_33-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_17.n_23-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_18.n_23-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_1.n_3249-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_2.n_3189-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_3.n_2994-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_4.n_1448-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_5.n_939-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_6.n_550-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_7.n_415-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_8.n_373-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_9.n_288-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_0.n_3482-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_10.n_148-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_11.n_82-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_12.n_53-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_13.n_31-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_14.n_22-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_1.n_2906-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_2.n_1584-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_3.n_1557-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_4.n_441-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_5.n_428-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_6.n_270-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_7.n_239-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_8.n_204-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_9.n_178-vs-ZNF687-201.alignment counts-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/neg_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_0.n_56-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/neg_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_1.n_22-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_0.n_5361-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_10.n_1504-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_11.n_1337-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_12.n_1155-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_13.n_891-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_14.n_693-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_15.n_534-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_16.n_474-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_17.n_343-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_18.n_320-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_19.n_216-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_1.n_4506-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_20.n_185-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_21.n_157-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_22.n_156-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_23.n_121-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_24.n_68-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_25.n_54-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_26.n_47-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_27.n_44-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_28.n_41-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_29.n_28-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_2.n_2985-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_30.n_26-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_31.n_22-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_32.n_22-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_33.n_20-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_34.n_20-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_35.n_20-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_3.n_2496-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_4.n_2356-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_5.n_2350-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_6.n_2148-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_7.n_1939-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_8.n_1644-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_9.n_1604-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_0.n_3645-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_10.n_181-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_11.n_97-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_12.n_47-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_13.n_45-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_14.n_39-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_15.n_36-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_16.n_33-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_17.n_23-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_18.n_23-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_1.n_3249-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_2.n_3189-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_3.n_2994-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_4.n_1448-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_5.n_939-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_6.n_550-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_7.n_415-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_8.n_373-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_9.n_288-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_0.n_3482-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_10.n_148-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_11.n_82-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_12.n_53-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_13.n_31-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_14.n_22-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_1.n_2906-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_2.n_1584-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_3.n_1557-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_4.n_441-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_5.n_428-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_6.n_270-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_7.n_239-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_8.n_204-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-206/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_9.n_178-vs-ZNF687-206.alignment counts-znf_b1h_alignment/ZNF687-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/neg_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_0.n_56-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/neg_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_1.n_22-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_0.n_5361-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_10.n_1504-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_11.n_1337-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_12.n_1155-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_13.n_891-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_14.n_693-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_15.n_534-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_16.n_474-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_17.n_343-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_18.n_320-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_19.n_216-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_1.n_4506-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_20.n_185-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_21.n_157-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_22.n_156-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_23.n_121-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_24.n_68-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_25.n_54-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_26.n_47-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_27.n_44-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_28.n_41-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_29.n_28-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_2.n_2985-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_30.n_26-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_31.n_22-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_32.n_22-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_33.n_20-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_34.n_20-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_35.n_20-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_3.n_2496-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_4.n_2356-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_5.n_2350-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_6.n_2148-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_7.n_1939-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_8.n_1644-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_counts_pattern_9.n_1604-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_0.n_3645-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_10.n_181-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_11.n_97-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_12.n_47-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_13.n_45-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_14.n_39-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_15.n_36-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_16.n_33-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_17.n_23-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_18.n_23-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_1.n_3249-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_2.n_3189-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_3.n_2994-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_4.n_1448-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_5.n_939-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_6.n_550-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_7.n_415-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_8.n_373-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_counts_pattern_9.n_288-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_0.n_3482-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_10.n_148-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_11.n_82-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_12.n_53-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_13.n_31-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_14.n_22-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_1.n_2906-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_2.n_1584-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_3.n_1557-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_4.n_441-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_5.n_428-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_6.n_270-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_7.n_239-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_8.n_204-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF687-207/pos_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_counts_pattern_9.n_178-vs-ZNF687-207.alignment counts-znf_b1h_alignment/ZNF687-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF691-201/pos_patterns.ENCSR130ZAR_ChIP_ZNF691_HepG2_ENCSR243YWR_counts_pattern_0.n_2578-vs-ZNF691-201.alignment counts-znf_b1h_alignment/ZNF691-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF691-201/pos_patterns.ENCSR130ZAR_ChIP_ZNF691_HepG2_ENCSR243YWR_counts_pattern_10.n_126-vs-ZNF691-201.alignment counts-znf_b1h_alignment/ZNF691-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF691-201/pos_patterns.ENCSR130ZAR_ChIP_ZNF691_HepG2_ENCSR243YWR_counts_pattern_11.n_31-vs-ZNF691-201.alignment counts-znf_b1h_alignment/ZNF691-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF691-201/pos_patterns.ENCSR130ZAR_ChIP_ZNF691_HepG2_ENCSR243YWR_counts_pattern_12.n_29-vs-ZNF691-201.alignment counts-znf_b1h_alignment/ZNF691-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF691-201/pos_patterns.ENCSR130ZAR_ChIP_ZNF691_HepG2_ENCSR243YWR_counts_pattern_1.n_2273-vs-ZNF691-201.alignment counts-znf_b1h_alignment/ZNF691-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF691-201/pos_patterns.ENCSR130ZAR_ChIP_ZNF691_HepG2_ENCSR243YWR_counts_pattern_2.n_2060-vs-ZNF691-201.alignment counts-znf_b1h_alignment/ZNF691-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF691-201/pos_patterns.ENCSR130ZAR_ChIP_ZNF691_HepG2_ENCSR243YWR_counts_pattern_3.n_2036-vs-ZNF691-201.alignment counts-znf_b1h_alignment/ZNF691-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF691-201/pos_patterns.ENCSR130ZAR_ChIP_ZNF691_HepG2_ENCSR243YWR_counts_pattern_4.n_1274-vs-ZNF691-201.alignment counts-znf_b1h_alignment/ZNF691-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF691-201/pos_patterns.ENCSR130ZAR_ChIP_ZNF691_HepG2_ENCSR243YWR_counts_pattern_5.n_982-vs-ZNF691-201.alignment counts-znf_b1h_alignment/ZNF691-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF691-201/pos_patterns.ENCSR130ZAR_ChIP_ZNF691_HepG2_ENCSR243YWR_counts_pattern_6.n_515-vs-ZNF691-201.alignment counts-znf_b1h_alignment/ZNF691-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF691-201/pos_patterns.ENCSR130ZAR_ChIP_ZNF691_HepG2_ENCSR243YWR_counts_pattern_7.n_342-vs-ZNF691-201.alignment counts-znf_b1h_alignment/ZNF691-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF691-201/pos_patterns.ENCSR130ZAR_ChIP_ZNF691_HepG2_ENCSR243YWR_counts_pattern_8.n_274-vs-ZNF691-201.alignment counts-znf_b1h_alignment/ZNF691-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF691-201/pos_patterns.ENCSR130ZAR_ChIP_ZNF691_HepG2_ENCSR243YWR_counts_pattern_9.n_231-vs-ZNF691-201.alignment counts-znf_b1h_alignment/ZNF691-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF69-202/ChipExo_models_ZNF69_counts-pos.pattern_0.n_113-vs-ZNF69-202.alignment counts-znf_b1h_alignment/ZNF69-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF692-201/Hughes_NB_models_ZNF692_counts-pos.pattern_0.n_406-vs-ZNF692-201.alignment counts-znf_b1h_alignment/ZNF692-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF692-201/pos_patterns.ENCSR418MKG_ChIP_ZNF692_HEK293_ENCSR561WGU_counts_pattern_0.n_6234-vs-ZNF692-201.alignment counts-znf_b1h_alignment/ZNF692-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF692-201/pos_patterns.ENCSR418MKG_ChIP_ZNF692_HEK293_ENCSR561WGU_counts_pattern_1.n_2692-vs-ZNF692-201.alignment counts-znf_b1h_alignment/ZNF692-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF692-201/pos_patterns.ENCSR418MKG_ChIP_ZNF692_HEK293_ENCSR561WGU_counts_pattern_2.n_2451-vs-ZNF692-201.alignment counts-znf_b1h_alignment/ZNF692-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF692-201/pos_patterns.ENCSR418MKG_ChIP_ZNF692_HEK293_ENCSR561WGU_counts_pattern_3.n_2355-vs-ZNF692-201.alignment counts-znf_b1h_alignment/ZNF692-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF692-201/pos_patterns.ENCSR418MKG_ChIP_ZNF692_HEK293_ENCSR561WGU_counts_pattern_4.n_1925-vs-ZNF692-201.alignment counts-znf_b1h_alignment/ZNF692-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF692-201/pos_patterns.ENCSR418MKG_ChIP_ZNF692_HEK293_ENCSR561WGU_counts_pattern_5.n_1695-vs-ZNF692-201.alignment counts-znf_b1h_alignment/ZNF692-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF692-201/pos_patterns.ENCSR418MKG_ChIP_ZNF692_HEK293_ENCSR561WGU_counts_pattern_6.n_1323-vs-ZNF692-201.alignment counts-znf_b1h_alignment/ZNF692-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF692-201/pos_patterns.ENCSR418MKG_ChIP_ZNF692_HEK293_ENCSR561WGU_counts_pattern_7.n_127-vs-ZNF692-201.alignment counts-znf_b1h_alignment/ZNF692-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF692-201/pos_patterns.ENCSR418MKG_ChIP_ZNF692_HEK293_ENCSR561WGU_counts_pattern_8.n_80-vs-ZNF692-201.alignment counts-znf_b1h_alignment/ZNF692-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF695-201/ChipExo_models_ZNF695_counts-neg.pattern_0.n_40-vs-ZNF695-201.alignment counts-znf_b1h_alignment/ZNF695-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF695-201/ChipExo_models_ZNF695_counts-neg.pattern_1.n_31-vs-ZNF695-201.alignment counts-znf_b1h_alignment/ZNF695-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF695-201/ChipExo_models_ZNF695_counts-neg.pattern_2.n_27-vs-ZNF695-201.alignment counts-znf_b1h_alignment/ZNF695-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF695-201/ChipExo_models_ZNF695_counts-neg.pattern_3.n_21-vs-ZNF695-201.alignment counts-znf_b1h_alignment/ZNF695-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF695-201/ChipExo_models_ZNF695_counts-pos.pattern_0.n_2536-vs-ZNF695-201.alignment counts-znf_b1h_alignment/ZNF695-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF695-201/ChipExo_models_ZNF695_counts-pos.pattern_10.n_21-vs-ZNF695-201.alignment counts-znf_b1h_alignment/ZNF695-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF695-201/ChipExo_models_ZNF695_counts-pos.pattern_1.n_1285-vs-ZNF695-201.alignment counts-znf_b1h_alignment/ZNF695-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF695-201/ChipExo_models_ZNF695_counts-pos.pattern_2.n_1199-vs-ZNF695-201.alignment counts-znf_b1h_alignment/ZNF695-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF695-201/ChipExo_models_ZNF695_counts-pos.pattern_3.n_274-vs-ZNF695-201.alignment counts-znf_b1h_alignment/ZNF695-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF695-201/ChipExo_models_ZNF695_counts-pos.pattern_4.n_197-vs-ZNF695-201.alignment counts-znf_b1h_alignment/ZNF695-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF695-201/ChipExo_models_ZNF695_counts-pos.pattern_5.n_190-vs-ZNF695-201.alignment counts-znf_b1h_alignment/ZNF695-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF695-201/ChipExo_models_ZNF695_counts-pos.pattern_6.n_169-vs-ZNF695-201.alignment counts-znf_b1h_alignment/ZNF695-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF695-201/ChipExo_models_ZNF695_counts-pos.pattern_7.n_157-vs-ZNF695-201.alignment counts-znf_b1h_alignment/ZNF695-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF695-201/ChipExo_models_ZNF695_counts-pos.pattern_8.n_39-vs-ZNF695-201.alignment counts-znf_b1h_alignment/ZNF695-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF695-201/ChipExo_models_ZNF695_counts-pos.pattern_9.n_25-vs-ZNF695-201.alignment counts-znf_b1h_alignment/ZNF695-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF695-201/pos_patterns.ENCSR187RGF_ChIP_ZNF695_K562_ENCSR363DCQ_counts_pattern_0.n_366-vs-ZNF695-201.alignment counts-znf_b1h_alignment/ZNF695-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF695-201/pos_patterns.ENCSR187RGF_ChIP_ZNF695_K562_ENCSR363DCQ_counts_pattern_1.n_75-vs-ZNF695-201.alignment counts-znf_b1h_alignment/ZNF695-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF695-201/pos_patterns.ENCSR187RGF_ChIP_ZNF695_K562_ENCSR363DCQ_counts_pattern_2.n_54-vs-ZNF695-201.alignment counts-znf_b1h_alignment/ZNF695-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF695-201/pos_patterns.ENCSR187RGF_ChIP_ZNF695_K562_ENCSR363DCQ_counts_pattern_3.n_47-vs-ZNF695-201.alignment counts-znf_b1h_alignment/ZNF695-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF695-201/pos_patterns.ENCSR187RGF_ChIP_ZNF695_K562_ENCSR363DCQ_counts_pattern_4.n_43-vs-ZNF695-201.alignment counts-znf_b1h_alignment/ZNF695-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF695-201/pos_patterns.ENCSR187RGF_ChIP_ZNF695_K562_ENCSR363DCQ_counts_pattern_5.n_41-vs-ZNF695-201.alignment counts-znf_b1h_alignment/ZNF695-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF696-201/neg_patterns.ENCSR276RQG_ChIP_ZNF696_K562_ENCSR291FNP_counts_pattern_0.n_282-vs-ZNF696-201.alignment counts-znf_b1h_alignment/ZNF696-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF696-201/neg_patterns.ENCSR276RQG_ChIP_ZNF696_K562_ENCSR291FNP_counts_pattern_1.n_199-vs-ZNF696-201.alignment counts-znf_b1h_alignment/ZNF696-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF696-201/neg_patterns.ENCSR276RQG_ChIP_ZNF696_K562_ENCSR291FNP_counts_pattern_2.n_168-vs-ZNF696-201.alignment counts-znf_b1h_alignment/ZNF696-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF696-201/neg_patterns.ENCSR276RQG_ChIP_ZNF696_K562_ENCSR291FNP_counts_pattern_3.n_47-vs-ZNF696-201.alignment counts-znf_b1h_alignment/ZNF696-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF696-201/neg_patterns.ENCSR276RQG_ChIP_ZNF696_K562_ENCSR291FNP_counts_pattern_4.n_41-vs-ZNF696-201.alignment counts-znf_b1h_alignment/ZNF696-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF696-201/neg_patterns.ENCSR276RQG_ChIP_ZNF696_K562_ENCSR291FNP_counts_pattern_5.n_38-vs-ZNF696-201.alignment counts-znf_b1h_alignment/ZNF696-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF696-201/neg_patterns.ENCSR276RQG_ChIP_ZNF696_K562_ENCSR291FNP_counts_pattern_6.n_31-vs-ZNF696-201.alignment counts-znf_b1h_alignment/ZNF696-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF696-201/neg_patterns.ENCSR276RQG_ChIP_ZNF696_K562_ENCSR291FNP_counts_pattern_7.n_31-vs-ZNF696-201.alignment counts-znf_b1h_alignment/ZNF696-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF696-201/neg_patterns.ENCSR276RQG_ChIP_ZNF696_K562_ENCSR291FNP_counts_pattern_8.n_26-vs-ZNF696-201.alignment counts-znf_b1h_alignment/ZNF696-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF696-201/pos_patterns.ENCSR276RQG_ChIP_ZNF696_K562_ENCSR291FNP_counts_pattern_0.n_48-vs-ZNF696-201.alignment counts-znf_b1h_alignment/ZNF696-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF696-201/pos_patterns.ENCSR276RQG_ChIP_ZNF696_K562_ENCSR291FNP_counts_pattern_10.n_22-vs-ZNF696-201.alignment counts-znf_b1h_alignment/ZNF696-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF696-201/pos_patterns.ENCSR276RQG_ChIP_ZNF696_K562_ENCSR291FNP_counts_pattern_11.n_21-vs-ZNF696-201.alignment counts-znf_b1h_alignment/ZNF696-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF696-201/pos_patterns.ENCSR276RQG_ChIP_ZNF696_K562_ENCSR291FNP_counts_pattern_1.n_39-vs-ZNF696-201.alignment counts-znf_b1h_alignment/ZNF696-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF696-201/pos_patterns.ENCSR276RQG_ChIP_ZNF696_K562_ENCSR291FNP_counts_pattern_2.n_32-vs-ZNF696-201.alignment counts-znf_b1h_alignment/ZNF696-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF696-201/pos_patterns.ENCSR276RQG_ChIP_ZNF696_K562_ENCSR291FNP_counts_pattern_3.n_32-vs-ZNF696-201.alignment counts-znf_b1h_alignment/ZNF696-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF696-201/pos_patterns.ENCSR276RQG_ChIP_ZNF696_K562_ENCSR291FNP_counts_pattern_4.n_31-vs-ZNF696-201.alignment counts-znf_b1h_alignment/ZNF696-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF696-201/pos_patterns.ENCSR276RQG_ChIP_ZNF696_K562_ENCSR291FNP_counts_pattern_5.n_27-vs-ZNF696-201.alignment counts-znf_b1h_alignment/ZNF696-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF696-201/pos_patterns.ENCSR276RQG_ChIP_ZNF696_K562_ENCSR291FNP_counts_pattern_6.n_24-vs-ZNF696-201.alignment counts-znf_b1h_alignment/ZNF696-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF696-201/pos_patterns.ENCSR276RQG_ChIP_ZNF696_K562_ENCSR291FNP_counts_pattern_7.n_23-vs-ZNF696-201.alignment counts-znf_b1h_alignment/ZNF696-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF696-201/pos_patterns.ENCSR276RQG_ChIP_ZNF696_K562_ENCSR291FNP_counts_pattern_8.n_23-vs-ZNF696-201.alignment counts-znf_b1h_alignment/ZNF696-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF696-201/pos_patterns.ENCSR276RQG_ChIP_ZNF696_K562_ENCSR291FNP_counts_pattern_9.n_23-vs-ZNF696-201.alignment counts-znf_b1h_alignment/ZNF696-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF697-201/pos_patterns.ENCSR734WFB_ChIP_ZNF697_HepG2_ENCSR998VIY_counts_pattern_0.n_2856-vs-ZNF697-201.alignment counts-znf_b1h_alignment/ZNF697-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF697-201/pos_patterns.ENCSR734WFB_ChIP_ZNF697_HepG2_ENCSR998VIY_counts_pattern_10.n_141-vs-ZNF697-201.alignment counts-znf_b1h_alignment/ZNF697-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF697-201/pos_patterns.ENCSR734WFB_ChIP_ZNF697_HepG2_ENCSR998VIY_counts_pattern_11.n_133-vs-ZNF697-201.alignment counts-znf_b1h_alignment/ZNF697-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF697-201/pos_patterns.ENCSR734WFB_ChIP_ZNF697_HepG2_ENCSR998VIY_counts_pattern_12.n_54-vs-ZNF697-201.alignment counts-znf_b1h_alignment/ZNF697-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF697-201/pos_patterns.ENCSR734WFB_ChIP_ZNF697_HepG2_ENCSR998VIY_counts_pattern_13.n_37-vs-ZNF697-201.alignment counts-znf_b1h_alignment/ZNF697-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF697-201/pos_patterns.ENCSR734WFB_ChIP_ZNF697_HepG2_ENCSR998VIY_counts_pattern_14.n_29-vs-ZNF697-201.alignment counts-znf_b1h_alignment/ZNF697-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF697-201/pos_patterns.ENCSR734WFB_ChIP_ZNF697_HepG2_ENCSR998VIY_counts_pattern_15.n_28-vs-ZNF697-201.alignment counts-znf_b1h_alignment/ZNF697-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF697-201/pos_patterns.ENCSR734WFB_ChIP_ZNF697_HepG2_ENCSR998VIY_counts_pattern_16.n_20-vs-ZNF697-201.alignment counts-znf_b1h_alignment/ZNF697-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF697-201/pos_patterns.ENCSR734WFB_ChIP_ZNF697_HepG2_ENCSR998VIY_counts_pattern_1.n_1669-vs-ZNF697-201.alignment counts-znf_b1h_alignment/ZNF697-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF697-201/pos_patterns.ENCSR734WFB_ChIP_ZNF697_HepG2_ENCSR998VIY_counts_pattern_2.n_1122-vs-ZNF697-201.alignment counts-znf_b1h_alignment/ZNF697-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF697-201/pos_patterns.ENCSR734WFB_ChIP_ZNF697_HepG2_ENCSR998VIY_counts_pattern_3.n_733-vs-ZNF697-201.alignment counts-znf_b1h_alignment/ZNF697-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF697-201/pos_patterns.ENCSR734WFB_ChIP_ZNF697_HepG2_ENCSR998VIY_counts_pattern_4.n_619-vs-ZNF697-201.alignment counts-znf_b1h_alignment/ZNF697-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF697-201/pos_patterns.ENCSR734WFB_ChIP_ZNF697_HepG2_ENCSR998VIY_counts_pattern_5.n_532-vs-ZNF697-201.alignment counts-znf_b1h_alignment/ZNF697-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF697-201/pos_patterns.ENCSR734WFB_ChIP_ZNF697_HepG2_ENCSR998VIY_counts_pattern_6.n_529-vs-ZNF697-201.alignment counts-znf_b1h_alignment/ZNF697-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF697-201/pos_patterns.ENCSR734WFB_ChIP_ZNF697_HepG2_ENCSR998VIY_counts_pattern_7.n_275-vs-ZNF697-201.alignment counts-znf_b1h_alignment/ZNF697-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF697-201/pos_patterns.ENCSR734WFB_ChIP_ZNF697_HepG2_ENCSR998VIY_counts_pattern_8.n_264-vs-ZNF697-201.alignment counts-znf_b1h_alignment/ZNF697-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF697-201/pos_patterns.ENCSR734WFB_ChIP_ZNF697_HepG2_ENCSR998VIY_counts_pattern_9.n_208-vs-ZNF697-201.alignment counts-znf_b1h_alignment/ZNF697-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF699-201/neg_patterns.ENCSR303SHG_ChIP_ZNF699_K562_ENCSR533DRR_counts_pattern_0.n_62-vs-ZNF699-201.alignment counts-znf_b1h_alignment/ZNF699-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF699-201/neg_patterns.ENCSR303SHG_ChIP_ZNF699_K562_ENCSR533DRR_counts_pattern_10.n_25-vs-ZNF699-201.alignment counts-znf_b1h_alignment/ZNF699-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF699-201/neg_patterns.ENCSR303SHG_ChIP_ZNF699_K562_ENCSR533DRR_counts_pattern_11.n_20-vs-ZNF699-201.alignment counts-znf_b1h_alignment/ZNF699-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF699-201/neg_patterns.ENCSR303SHG_ChIP_ZNF699_K562_ENCSR533DRR_counts_pattern_1.n_56-vs-ZNF699-201.alignment counts-znf_b1h_alignment/ZNF699-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF699-201/neg_patterns.ENCSR303SHG_ChIP_ZNF699_K562_ENCSR533DRR_counts_pattern_2.n_44-vs-ZNF699-201.alignment counts-znf_b1h_alignment/ZNF699-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF699-201/neg_patterns.ENCSR303SHG_ChIP_ZNF699_K562_ENCSR533DRR_counts_pattern_3.n_41-vs-ZNF699-201.alignment counts-znf_b1h_alignment/ZNF699-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF699-201/neg_patterns.ENCSR303SHG_ChIP_ZNF699_K562_ENCSR533DRR_counts_pattern_4.n_40-vs-ZNF699-201.alignment counts-znf_b1h_alignment/ZNF699-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF699-201/neg_patterns.ENCSR303SHG_ChIP_ZNF699_K562_ENCSR533DRR_counts_pattern_5.n_37-vs-ZNF699-201.alignment counts-znf_b1h_alignment/ZNF699-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF699-201/neg_patterns.ENCSR303SHG_ChIP_ZNF699_K562_ENCSR533DRR_counts_pattern_6.n_37-vs-ZNF699-201.alignment counts-znf_b1h_alignment/ZNF699-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF699-201/neg_patterns.ENCSR303SHG_ChIP_ZNF699_K562_ENCSR533DRR_counts_pattern_7.n_31-vs-ZNF699-201.alignment counts-znf_b1h_alignment/ZNF699-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF699-201/neg_patterns.ENCSR303SHG_ChIP_ZNF699_K562_ENCSR533DRR_counts_pattern_8.n_30-vs-ZNF699-201.alignment counts-znf_b1h_alignment/ZNF699-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF699-201/neg_patterns.ENCSR303SHG_ChIP_ZNF699_K562_ENCSR533DRR_counts_pattern_9.n_25-vs-ZNF699-201.alignment counts-znf_b1h_alignment/ZNF699-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF699-201/pos_patterns.ENCSR303SHG_ChIP_ZNF699_K562_ENCSR533DRR_counts_pattern_0.n_47-vs-ZNF699-201.alignment counts-znf_b1h_alignment/ZNF699-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF699-201/pos_patterns.ENCSR303SHG_ChIP_ZNF699_K562_ENCSR533DRR_counts_pattern_10.n_20-vs-ZNF699-201.alignment counts-znf_b1h_alignment/ZNF699-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF699-201/pos_patterns.ENCSR303SHG_ChIP_ZNF699_K562_ENCSR533DRR_counts_pattern_1.n_35-vs-ZNF699-201.alignment counts-znf_b1h_alignment/ZNF699-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF699-201/pos_patterns.ENCSR303SHG_ChIP_ZNF699_K562_ENCSR533DRR_counts_pattern_2.n_32-vs-ZNF699-201.alignment counts-znf_b1h_alignment/ZNF699-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF699-201/pos_patterns.ENCSR303SHG_ChIP_ZNF699_K562_ENCSR533DRR_counts_pattern_3.n_30-vs-ZNF699-201.alignment counts-znf_b1h_alignment/ZNF699-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF699-201/pos_patterns.ENCSR303SHG_ChIP_ZNF699_K562_ENCSR533DRR_counts_pattern_4.n_28-vs-ZNF699-201.alignment counts-znf_b1h_alignment/ZNF699-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF699-201/pos_patterns.ENCSR303SHG_ChIP_ZNF699_K562_ENCSR533DRR_counts_pattern_5.n_27-vs-ZNF699-201.alignment counts-znf_b1h_alignment/ZNF699-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF699-201/pos_patterns.ENCSR303SHG_ChIP_ZNF699_K562_ENCSR533DRR_counts_pattern_6.n_23-vs-ZNF699-201.alignment counts-znf_b1h_alignment/ZNF699-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF699-201/pos_patterns.ENCSR303SHG_ChIP_ZNF699_K562_ENCSR533DRR_counts_pattern_7.n_22-vs-ZNF699-201.alignment counts-znf_b1h_alignment/ZNF699-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF699-201/pos_patterns.ENCSR303SHG_ChIP_ZNF699_K562_ENCSR533DRR_counts_pattern_8.n_21-vs-ZNF699-201.alignment counts-znf_b1h_alignment/ZNF699-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF699-201/pos_patterns.ENCSR303SHG_ChIP_ZNF699_K562_ENCSR533DRR_counts_pattern_9.n_20-vs-ZNF699-201.alignment counts-znf_b1h_alignment/ZNF699-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF700-201/pos_patterns.ENCSR959BQO_ChIP_ZNF700_K562_ENCSR780OCG_counts_pattern_0.n_130-vs-ZNF700-201.alignment counts-znf_b1h_alignment/ZNF700-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF700-201/pos_patterns.ENCSR959BQO_ChIP_ZNF700_K562_ENCSR780OCG_counts_pattern_10.n_32-vs-ZNF700-201.alignment counts-znf_b1h_alignment/ZNF700-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF700-201/pos_patterns.ENCSR959BQO_ChIP_ZNF700_K562_ENCSR780OCG_counts_pattern_11.n_29-vs-ZNF700-201.alignment counts-znf_b1h_alignment/ZNF700-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF700-201/pos_patterns.ENCSR959BQO_ChIP_ZNF700_K562_ENCSR780OCG_counts_pattern_12.n_29-vs-ZNF700-201.alignment counts-znf_b1h_alignment/ZNF700-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF700-201/pos_patterns.ENCSR959BQO_ChIP_ZNF700_K562_ENCSR780OCG_counts_pattern_13.n_29-vs-ZNF700-201.alignment counts-znf_b1h_alignment/ZNF700-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF700-201/pos_patterns.ENCSR959BQO_ChIP_ZNF700_K562_ENCSR780OCG_counts_pattern_14.n_24-vs-ZNF700-201.alignment counts-znf_b1h_alignment/ZNF700-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF700-201/pos_patterns.ENCSR959BQO_ChIP_ZNF700_K562_ENCSR780OCG_counts_pattern_15.n_21-vs-ZNF700-201.alignment counts-znf_b1h_alignment/ZNF700-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF700-201/pos_patterns.ENCSR959BQO_ChIP_ZNF700_K562_ENCSR780OCG_counts_pattern_16.n_20-vs-ZNF700-201.alignment counts-znf_b1h_alignment/ZNF700-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF700-201/pos_patterns.ENCSR959BQO_ChIP_ZNF700_K562_ENCSR780OCG_counts_pattern_1.n_93-vs-ZNF700-201.alignment counts-znf_b1h_alignment/ZNF700-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF700-201/pos_patterns.ENCSR959BQO_ChIP_ZNF700_K562_ENCSR780OCG_counts_pattern_2.n_78-vs-ZNF700-201.alignment counts-znf_b1h_alignment/ZNF700-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF700-201/pos_patterns.ENCSR959BQO_ChIP_ZNF700_K562_ENCSR780OCG_counts_pattern_3.n_72-vs-ZNF700-201.alignment counts-znf_b1h_alignment/ZNF700-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF700-201/pos_patterns.ENCSR959BQO_ChIP_ZNF700_K562_ENCSR780OCG_counts_pattern_4.n_69-vs-ZNF700-201.alignment counts-znf_b1h_alignment/ZNF700-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF700-201/pos_patterns.ENCSR959BQO_ChIP_ZNF700_K562_ENCSR780OCG_counts_pattern_5.n_66-vs-ZNF700-201.alignment counts-znf_b1h_alignment/ZNF700-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF700-201/pos_patterns.ENCSR959BQO_ChIP_ZNF700_K562_ENCSR780OCG_counts_pattern_6.n_58-vs-ZNF700-201.alignment counts-znf_b1h_alignment/ZNF700-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF700-201/pos_patterns.ENCSR959BQO_ChIP_ZNF700_K562_ENCSR780OCG_counts_pattern_7.n_57-vs-ZNF700-201.alignment counts-znf_b1h_alignment/ZNF700-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF700-201/pos_patterns.ENCSR959BQO_ChIP_ZNF700_K562_ENCSR780OCG_counts_pattern_8.n_55-vs-ZNF700-201.alignment counts-znf_b1h_alignment/ZNF700-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF700-201/pos_patterns.ENCSR959BQO_ChIP_ZNF700_K562_ENCSR780OCG_counts_pattern_9.n_40-vs-ZNF700-201.alignment counts-znf_b1h_alignment/ZNF700-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF701-201/ChipExo_models_ZNF701_counts-pos.pattern_0.n_252-vs-ZNF701-201.alignment counts-znf_b1h_alignment/ZNF701-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF701-201/ChipExo_models_ZNF701_counts-pos.pattern_1.n_209-vs-ZNF701-201.alignment counts-znf_b1h_alignment/ZNF701-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF701-201/pos_patterns.ENCSR547TGL_ChIP_ZNF701_HEK293_ENCSR978UNF_counts_pattern_0.n_381-vs-ZNF701-201.alignment counts-znf_b1h_alignment/ZNF701-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF701-201/pos_patterns.ENCSR547TGL_ChIP_ZNF701_HEK293_ENCSR978UNF_counts_pattern_1.n_115-vs-ZNF701-201.alignment counts-znf_b1h_alignment/ZNF701-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF701-201/pos_patterns.ENCSR547TGL_ChIP_ZNF701_HEK293_ENCSR978UNF_counts_pattern_2.n_88-vs-ZNF701-201.alignment counts-znf_b1h_alignment/ZNF701-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF701-207/ChipExo_models_ZNF701_counts-pos.pattern_0.n_252-vs-ZNF701-207.alignment counts-znf_b1h_alignment/ZNF701-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF701-207/ChipExo_models_ZNF701_counts-pos.pattern_1.n_209-vs-ZNF701-207.alignment counts-znf_b1h_alignment/ZNF701-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF701-207/pos_patterns.ENCSR547TGL_ChIP_ZNF701_HEK293_ENCSR978UNF_counts_pattern_0.n_381-vs-ZNF701-207.alignment counts-znf_b1h_alignment/ZNF701-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF701-207/pos_patterns.ENCSR547TGL_ChIP_ZNF701_HEK293_ENCSR978UNF_counts_pattern_1.n_115-vs-ZNF701-207.alignment counts-znf_b1h_alignment/ZNF701-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF701-207/pos_patterns.ENCSR547TGL_ChIP_ZNF701_HEK293_ENCSR978UNF_counts_pattern_2.n_88-vs-ZNF701-207.alignment counts-znf_b1h_alignment/ZNF701-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF70-201/pos_patterns.ENCSR207GYC_ChIP_ZNF70_SK-N-SH_ENCSR954CQT_counts_pattern_0.n_4073-vs-ZNF70-201.alignment counts-znf_b1h_alignment/ZNF70-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF70-201/pos_patterns.ENCSR207GYC_ChIP_ZNF70_SK-N-SH_ENCSR954CQT_counts_pattern_1.n_2678-vs-ZNF70-201.alignment counts-znf_b1h_alignment/ZNF70-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF70-201/pos_patterns.ENCSR207GYC_ChIP_ZNF70_SK-N-SH_ENCSR954CQT_counts_pattern_2.n_1485-vs-ZNF70-201.alignment counts-znf_b1h_alignment/ZNF70-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF70-201/pos_patterns.ENCSR207GYC_ChIP_ZNF70_SK-N-SH_ENCSR954CQT_counts_pattern_3.n_81-vs-ZNF70-201.alignment counts-znf_b1h_alignment/ZNF70-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF70-201/pos_patterns.ENCSR207GYC_ChIP_ZNF70_SK-N-SH_ENCSR954CQT_counts_pattern_4.n_43-vs-ZNF70-201.alignment counts-znf_b1h_alignment/ZNF70-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF70-201/pos_patterns.ENCSR207GYC_ChIP_ZNF70_SK-N-SH_ENCSR954CQT_counts_pattern_5.n_39-vs-ZNF70-201.alignment counts-znf_b1h_alignment/ZNF70-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF70-201/pos_patterns.ENCSR207GYC_ChIP_ZNF70_SK-N-SH_ENCSR954CQT_counts_pattern_6.n_32-vs-ZNF70-201.alignment counts-znf_b1h_alignment/ZNF70-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR194KWL_ChIP_ZNF704_HEK293_ENCSR546QIV_counts_pattern_0.n_270-vs-ZNF704-201.alignment counts-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR194KWL_ChIP_ZNF704_HEK293_ENCSR546QIV_counts_pattern_1.n_260-vs-ZNF704-201.alignment counts-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR194KWL_ChIP_ZNF704_HEK293_ENCSR546QIV_counts_pattern_2.n_49-vs-ZNF704-201.alignment counts-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR523RGJ_ChIP_ZNF704_HepG2_ENCSR642AEQ_counts_pattern_0.n_2788-vs-ZNF704-201.alignment counts-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR523RGJ_ChIP_ZNF704_HepG2_ENCSR642AEQ_counts_pattern_10.n_194-vs-ZNF704-201.alignment counts-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR523RGJ_ChIP_ZNF704_HepG2_ENCSR642AEQ_counts_pattern_11.n_191-vs-ZNF704-201.alignment counts-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR523RGJ_ChIP_ZNF704_HepG2_ENCSR642AEQ_counts_pattern_12.n_139-vs-ZNF704-201.alignment counts-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR523RGJ_ChIP_ZNF704_HepG2_ENCSR642AEQ_counts_pattern_13.n_134-vs-ZNF704-201.alignment counts-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR523RGJ_ChIP_ZNF704_HepG2_ENCSR642AEQ_counts_pattern_14.n_131-vs-ZNF704-201.alignment counts-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR523RGJ_ChIP_ZNF704_HepG2_ENCSR642AEQ_counts_pattern_15.n_102-vs-ZNF704-201.alignment counts-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR523RGJ_ChIP_ZNF704_HepG2_ENCSR642AEQ_counts_pattern_16.n_79-vs-ZNF704-201.alignment counts-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR523RGJ_ChIP_ZNF704_HepG2_ENCSR642AEQ_counts_pattern_17.n_79-vs-ZNF704-201.alignment counts-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR523RGJ_ChIP_ZNF704_HepG2_ENCSR642AEQ_counts_pattern_18.n_70-vs-ZNF704-201.alignment counts-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR523RGJ_ChIP_ZNF704_HepG2_ENCSR642AEQ_counts_pattern_19.n_49-vs-ZNF704-201.alignment counts-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR523RGJ_ChIP_ZNF704_HepG2_ENCSR642AEQ_counts_pattern_1.n_1623-vs-ZNF704-201.alignment counts-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR523RGJ_ChIP_ZNF704_HepG2_ENCSR642AEQ_counts_pattern_20.n_43-vs-ZNF704-201.alignment counts-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR523RGJ_ChIP_ZNF704_HepG2_ENCSR642AEQ_counts_pattern_2.n_1247-vs-ZNF704-201.alignment counts-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR523RGJ_ChIP_ZNF704_HepG2_ENCSR642AEQ_counts_pattern_3.n_1086-vs-ZNF704-201.alignment counts-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR523RGJ_ChIP_ZNF704_HepG2_ENCSR642AEQ_counts_pattern_4.n_460-vs-ZNF704-201.alignment counts-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR523RGJ_ChIP_ZNF704_HepG2_ENCSR642AEQ_counts_pattern_5.n_422-vs-ZNF704-201.alignment counts-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR523RGJ_ChIP_ZNF704_HepG2_ENCSR642AEQ_counts_pattern_6.n_328-vs-ZNF704-201.alignment counts-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR523RGJ_ChIP_ZNF704_HepG2_ENCSR642AEQ_counts_pattern_7.n_305-vs-ZNF704-201.alignment counts-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR523RGJ_ChIP_ZNF704_HepG2_ENCSR642AEQ_counts_pattern_8.n_251-vs-ZNF704-201.alignment counts-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR523RGJ_ChIP_ZNF704_HepG2_ENCSR642AEQ_counts_pattern_9.n_242-vs-ZNF704-201.alignment counts-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF705G-201/ChipExo_models_ZNF705G_counts-pos.pattern_0.n_122-vs-ZNF705G-201.alignment counts-znf_b1h_alignment/ZNF705G-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF707-201/ChipExo_models_ZNF707_counts-pos.pattern_0.n_2696-vs-ZNF707-201.alignment counts-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR017XHZ_ChIP_ZNF707_HepG2_ENCSR043MDP_counts_pattern_0.n_1092-vs-ZNF707-201.alignment counts-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR017XHZ_ChIP_ZNF707_HepG2_ENCSR043MDP_counts_pattern_10.n_32-vs-ZNF707-201.alignment counts-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR017XHZ_ChIP_ZNF707_HepG2_ENCSR043MDP_counts_pattern_11.n_21-vs-ZNF707-201.alignment counts-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR017XHZ_ChIP_ZNF707_HepG2_ENCSR043MDP_counts_pattern_1.n_973-vs-ZNF707-201.alignment counts-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR017XHZ_ChIP_ZNF707_HepG2_ENCSR043MDP_counts_pattern_2.n_792-vs-ZNF707-201.alignment counts-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR017XHZ_ChIP_ZNF707_HepG2_ENCSR043MDP_counts_pattern_3.n_511-vs-ZNF707-201.alignment counts-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR017XHZ_ChIP_ZNF707_HepG2_ENCSR043MDP_counts_pattern_4.n_156-vs-ZNF707-201.alignment counts-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR017XHZ_ChIP_ZNF707_HepG2_ENCSR043MDP_counts_pattern_5.n_88-vs-ZNF707-201.alignment counts-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR017XHZ_ChIP_ZNF707_HepG2_ENCSR043MDP_counts_pattern_6.n_79-vs-ZNF707-201.alignment counts-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR017XHZ_ChIP_ZNF707_HepG2_ENCSR043MDP_counts_pattern_7.n_75-vs-ZNF707-201.alignment counts-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR017XHZ_ChIP_ZNF707_HepG2_ENCSR043MDP_counts_pattern_8.n_51-vs-ZNF707-201.alignment counts-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR017XHZ_ChIP_ZNF707_HepG2_ENCSR043MDP_counts_pattern_9.n_35-vs-ZNF707-201.alignment counts-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR077TKJ_ChIP_ZNF707_K562_ENCSR000RSZ_counts_pattern_0.n_1053-vs-ZNF707-201.alignment counts-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR077TKJ_ChIP_ZNF707_K562_ENCSR000RSZ_counts_pattern_1.n_421-vs-ZNF707-201.alignment counts-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR077TKJ_ChIP_ZNF707_K562_ENCSR000RSZ_counts_pattern_2.n_361-vs-ZNF707-201.alignment counts-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR077TKJ_ChIP_ZNF707_K562_ENCSR000RSZ_counts_pattern_3.n_79-vs-ZNF707-201.alignment counts-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR077TKJ_ChIP_ZNF707_K562_ENCSR000RSZ_counts_pattern_4.n_69-vs-ZNF707-201.alignment counts-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR077TKJ_ChIP_ZNF707_K562_ENCSR000RSZ_counts_pattern_5.n_31-vs-ZNF707-201.alignment counts-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR854IPI_ChIP_ZNF707_HEK293_ENCSR480HEH_counts_pattern_0.n_1404-vs-ZNF707-201.alignment counts-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR854IPI_ChIP_ZNF707_HEK293_ENCSR480HEH_counts_pattern_1.n_58-vs-ZNF707-201.alignment counts-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR854IPI_ChIP_ZNF707_HEK293_ENCSR480HEH_counts_pattern_2.n_21-vs-ZNF707-201.alignment counts-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF708-201/ChipExo_models_ZNF708_counts-pos.pattern_0.n_776-vs-ZNF708-201.alignment counts-znf_b1h_alignment/ZNF708-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF708-201/ChipExo_models_ZNF708_counts-pos.pattern_1.n_74-vs-ZNF708-201.alignment counts-znf_b1h_alignment/ZNF708-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF708-201/Hughes_GR_models_ZNF708_counts-pos.pattern_0.n_546-vs-ZNF708-201.alignment counts-znf_b1h_alignment/ZNF708-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF709-201/pos_patterns.ENCSR984IXF_ChIP_ZNF709_HepG2_ENCSR881EKM_counts_pattern_0.n_1663-vs-ZNF709-201.alignment counts-znf_b1h_alignment/ZNF709-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF709-201/pos_patterns.ENCSR984IXF_ChIP_ZNF709_HepG2_ENCSR881EKM_counts_pattern_10.n_102-vs-ZNF709-201.alignment counts-znf_b1h_alignment/ZNF709-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF709-201/pos_patterns.ENCSR984IXF_ChIP_ZNF709_HepG2_ENCSR881EKM_counts_pattern_11.n_45-vs-ZNF709-201.alignment counts-znf_b1h_alignment/ZNF709-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF709-201/pos_patterns.ENCSR984IXF_ChIP_ZNF709_HepG2_ENCSR881EKM_counts_pattern_12.n_41-vs-ZNF709-201.alignment counts-znf_b1h_alignment/ZNF709-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF709-201/pos_patterns.ENCSR984IXF_ChIP_ZNF709_HepG2_ENCSR881EKM_counts_pattern_13.n_25-vs-ZNF709-201.alignment counts-znf_b1h_alignment/ZNF709-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF709-201/pos_patterns.ENCSR984IXF_ChIP_ZNF709_HepG2_ENCSR881EKM_counts_pattern_1.n_1603-vs-ZNF709-201.alignment counts-znf_b1h_alignment/ZNF709-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF709-201/pos_patterns.ENCSR984IXF_ChIP_ZNF709_HepG2_ENCSR881EKM_counts_pattern_2.n_1240-vs-ZNF709-201.alignment counts-znf_b1h_alignment/ZNF709-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF709-201/pos_patterns.ENCSR984IXF_ChIP_ZNF709_HepG2_ENCSR881EKM_counts_pattern_3.n_1059-vs-ZNF709-201.alignment counts-znf_b1h_alignment/ZNF709-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF709-201/pos_patterns.ENCSR984IXF_ChIP_ZNF709_HepG2_ENCSR881EKM_counts_pattern_4.n_823-vs-ZNF709-201.alignment counts-znf_b1h_alignment/ZNF709-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF709-201/pos_patterns.ENCSR984IXF_ChIP_ZNF709_HepG2_ENCSR881EKM_counts_pattern_5.n_278-vs-ZNF709-201.alignment counts-znf_b1h_alignment/ZNF709-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF709-201/pos_patterns.ENCSR984IXF_ChIP_ZNF709_HepG2_ENCSR881EKM_counts_pattern_6.n_185-vs-ZNF709-201.alignment counts-znf_b1h_alignment/ZNF709-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF709-201/pos_patterns.ENCSR984IXF_ChIP_ZNF709_HepG2_ENCSR881EKM_counts_pattern_7.n_143-vs-ZNF709-201.alignment counts-znf_b1h_alignment/ZNF709-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF709-201/pos_patterns.ENCSR984IXF_ChIP_ZNF709_HepG2_ENCSR881EKM_counts_pattern_8.n_140-vs-ZNF709-201.alignment counts-znf_b1h_alignment/ZNF709-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF709-201/pos_patterns.ENCSR984IXF_ChIP_ZNF709_HepG2_ENCSR881EKM_counts_pattern_9.n_103-vs-ZNF709-201.alignment counts-znf_b1h_alignment/ZNF709-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF710-201/neg_patterns.ENCSR670UEX_ChIP_ZNF710_HepG2_ENCSR537YVK_counts_pattern_0.n_29-vs-ZNF710-201.alignment counts-znf_b1h_alignment/ZNF710-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF710-201/neg_patterns.ENCSR670UEX_ChIP_ZNF710_HepG2_ENCSR537YVK_counts_pattern_1.n_25-vs-ZNF710-201.alignment counts-znf_b1h_alignment/ZNF710-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF710-201/neg_patterns.ENCSR670UEX_ChIP_ZNF710_HepG2_ENCSR537YVK_counts_pattern_2.n_20-vs-ZNF710-201.alignment counts-znf_b1h_alignment/ZNF710-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF710-201/pos_patterns.ENCSR670UEX_ChIP_ZNF710_HepG2_ENCSR537YVK_counts_pattern_0.n_4723-vs-ZNF710-201.alignment counts-znf_b1h_alignment/ZNF710-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF710-201/pos_patterns.ENCSR670UEX_ChIP_ZNF710_HepG2_ENCSR537YVK_counts_pattern_10.n_264-vs-ZNF710-201.alignment counts-znf_b1h_alignment/ZNF710-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF710-201/pos_patterns.ENCSR670UEX_ChIP_ZNF710_HepG2_ENCSR537YVK_counts_pattern_11.n_165-vs-ZNF710-201.alignment counts-znf_b1h_alignment/ZNF710-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF710-201/pos_patterns.ENCSR670UEX_ChIP_ZNF710_HepG2_ENCSR537YVK_counts_pattern_12.n_110-vs-ZNF710-201.alignment counts-znf_b1h_alignment/ZNF710-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF710-201/pos_patterns.ENCSR670UEX_ChIP_ZNF710_HepG2_ENCSR537YVK_counts_pattern_13.n_106-vs-ZNF710-201.alignment counts-znf_b1h_alignment/ZNF710-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF710-201/pos_patterns.ENCSR670UEX_ChIP_ZNF710_HepG2_ENCSR537YVK_counts_pattern_14.n_66-vs-ZNF710-201.alignment counts-znf_b1h_alignment/ZNF710-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF710-201/pos_patterns.ENCSR670UEX_ChIP_ZNF710_HepG2_ENCSR537YVK_counts_pattern_15.n_27-vs-ZNF710-201.alignment counts-znf_b1h_alignment/ZNF710-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF710-201/pos_patterns.ENCSR670UEX_ChIP_ZNF710_HepG2_ENCSR537YVK_counts_pattern_16.n_26-vs-ZNF710-201.alignment counts-znf_b1h_alignment/ZNF710-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF710-201/pos_patterns.ENCSR670UEX_ChIP_ZNF710_HepG2_ENCSR537YVK_counts_pattern_17.n_25-vs-ZNF710-201.alignment counts-znf_b1h_alignment/ZNF710-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF710-201/pos_patterns.ENCSR670UEX_ChIP_ZNF710_HepG2_ENCSR537YVK_counts_pattern_1.n_2865-vs-ZNF710-201.alignment counts-znf_b1h_alignment/ZNF710-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF710-201/pos_patterns.ENCSR670UEX_ChIP_ZNF710_HepG2_ENCSR537YVK_counts_pattern_2.n_1889-vs-ZNF710-201.alignment counts-znf_b1h_alignment/ZNF710-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF710-201/pos_patterns.ENCSR670UEX_ChIP_ZNF710_HepG2_ENCSR537YVK_counts_pattern_3.n_1455-vs-ZNF710-201.alignment counts-znf_b1h_alignment/ZNF710-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF710-201/pos_patterns.ENCSR670UEX_ChIP_ZNF710_HepG2_ENCSR537YVK_counts_pattern_4.n_621-vs-ZNF710-201.alignment counts-znf_b1h_alignment/ZNF710-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF710-201/pos_patterns.ENCSR670UEX_ChIP_ZNF710_HepG2_ENCSR537YVK_counts_pattern_5.n_547-vs-ZNF710-201.alignment counts-znf_b1h_alignment/ZNF710-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF710-201/pos_patterns.ENCSR670UEX_ChIP_ZNF710_HepG2_ENCSR537YVK_counts_pattern_6.n_503-vs-ZNF710-201.alignment counts-znf_b1h_alignment/ZNF710-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF710-201/pos_patterns.ENCSR670UEX_ChIP_ZNF710_HepG2_ENCSR537YVK_counts_pattern_7.n_492-vs-ZNF710-201.alignment counts-znf_b1h_alignment/ZNF710-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF710-201/pos_patterns.ENCSR670UEX_ChIP_ZNF710_HepG2_ENCSR537YVK_counts_pattern_8.n_318-vs-ZNF710-201.alignment counts-znf_b1h_alignment/ZNF710-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF710-201/pos_patterns.ENCSR670UEX_ChIP_ZNF710_HepG2_ENCSR537YVK_counts_pattern_9.n_279-vs-ZNF710-201.alignment counts-znf_b1h_alignment/ZNF710-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF71-203/Hughes_NB_models_ZNF71_counts-pos.pattern_0.n_246-vs-ZNF71-203.alignment counts-znf_b1h_alignment/ZNF71-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF71-203/Hughes_NB_models_ZNF71_counts-pos.pattern_10.n_44-vs-ZNF71-203.alignment counts-znf_b1h_alignment/ZNF71-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF71-203/Hughes_NB_models_ZNF71_counts-pos.pattern_11.n_31-vs-ZNF71-203.alignment counts-znf_b1h_alignment/ZNF71-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF71-203/Hughes_NB_models_ZNF71_counts-pos.pattern_12.n_28-vs-ZNF71-203.alignment counts-znf_b1h_alignment/ZNF71-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF71-203/Hughes_NB_models_ZNF71_counts-pos.pattern_1.n_145-vs-ZNF71-203.alignment counts-znf_b1h_alignment/ZNF71-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF71-203/Hughes_NB_models_ZNF71_counts-pos.pattern_2.n_132-vs-ZNF71-203.alignment counts-znf_b1h_alignment/ZNF71-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF71-203/Hughes_NB_models_ZNF71_counts-pos.pattern_3.n_122-vs-ZNF71-203.alignment counts-znf_b1h_alignment/ZNF71-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF71-203/Hughes_NB_models_ZNF71_counts-pos.pattern_4.n_118-vs-ZNF71-203.alignment counts-znf_b1h_alignment/ZNF71-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF71-203/Hughes_NB_models_ZNF71_counts-pos.pattern_5.n_116-vs-ZNF71-203.alignment counts-znf_b1h_alignment/ZNF71-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF71-203/Hughes_NB_models_ZNF71_counts-pos.pattern_6.n_116-vs-ZNF71-203.alignment counts-znf_b1h_alignment/ZNF71-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF71-203/Hughes_NB_models_ZNF71_counts-pos.pattern_7.n_106-vs-ZNF71-203.alignment counts-znf_b1h_alignment/ZNF71-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF71-203/Hughes_NB_models_ZNF71_counts-pos.pattern_8.n_61-vs-ZNF71-203.alignment counts-znf_b1h_alignment/ZNF71-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF71-203/Hughes_NB_models_ZNF71_counts-pos.pattern_9.n_52-vs-ZNF71-203.alignment counts-znf_b1h_alignment/ZNF71-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF713-201/pos_patterns.ENCSR513NBU_ChIP_ZNF713_HepG2_ENCSR634VQG_counts_pattern_0.n_1463-vs-ZNF713-201.alignment counts-znf_b1h_alignment/ZNF713-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF713-201/pos_patterns.ENCSR513NBU_ChIP_ZNF713_HepG2_ENCSR634VQG_counts_pattern_1.n_1263-vs-ZNF713-201.alignment counts-znf_b1h_alignment/ZNF713-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF713-201/pos_patterns.ENCSR513NBU_ChIP_ZNF713_HepG2_ENCSR634VQG_counts_pattern_2.n_1241-vs-ZNF713-201.alignment counts-znf_b1h_alignment/ZNF713-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF713-201/pos_patterns.ENCSR513NBU_ChIP_ZNF713_HepG2_ENCSR634VQG_counts_pattern_3.n_1192-vs-ZNF713-201.alignment counts-znf_b1h_alignment/ZNF713-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF714-201/ChipExo_models_ZNF714_counts-pos.pattern_0.n_491-vs-ZNF714-201.alignment counts-znf_b1h_alignment/ZNF714-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF714-201/ChipExo_models_ZNF714_counts-pos.pattern_1.n_195-vs-ZNF714-201.alignment counts-znf_b1h_alignment/ZNF714-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF714-201/ChipExo_models_ZNF714_counts-pos.pattern_2.n_184-vs-ZNF714-201.alignment counts-znf_b1h_alignment/ZNF714-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF714-201/ChipExo_models_ZNF714_counts-pos.pattern_3.n_118-vs-ZNF714-201.alignment counts-znf_b1h_alignment/ZNF714-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF716-201/ChipExo_models_ZNF716_counts-pos.pattern_0.n_317-vs-ZNF716-201.alignment counts-znf_b1h_alignment/ZNF716-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF716-201/ChipExo_models_ZNF716_counts-pos.pattern_1.n_210-vs-ZNF716-201.alignment counts-znf_b1h_alignment/ZNF716-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF716-201/ChipExo_models_ZNF716_counts-pos.pattern_2.n_144-vs-ZNF716-201.alignment counts-znf_b1h_alignment/ZNF716-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF716-201/ChipExo_models_ZNF716_counts-pos.pattern_3.n_122-vs-ZNF716-201.alignment counts-znf_b1h_alignment/ZNF716-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF716-201/ChipExo_models_ZNF716_counts-pos.pattern_4.n_76-vs-ZNF716-201.alignment counts-znf_b1h_alignment/ZNF716-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF716-201/ChipExo_models_ZNF716_counts-pos.pattern_5.n_63-vs-ZNF716-201.alignment counts-znf_b1h_alignment/ZNF716-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF716-201/ChipExo_models_ZNF716_counts-pos.pattern_6.n_38-vs-ZNF716-201.alignment counts-znf_b1h_alignment/ZNF716-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF716-201/ChipExo_models_ZNF716_counts-pos.pattern_7.n_24-vs-ZNF716-201.alignment counts-znf_b1h_alignment/ZNF716-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF717-204/neg_patterns.ENCSR987KYK_ChIP_ZNF717_K562_ENCSR152ILV_counts_pattern_0.n_144-vs-ZNF717-204.alignment counts-znf_b1h_alignment/ZNF717-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF717-204/neg_patterns.ENCSR987KYK_ChIP_ZNF717_K562_ENCSR152ILV_counts_pattern_10.n_27-vs-ZNF717-204.alignment counts-znf_b1h_alignment/ZNF717-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF717-204/neg_patterns.ENCSR987KYK_ChIP_ZNF717_K562_ENCSR152ILV_counts_pattern_11.n_25-vs-ZNF717-204.alignment counts-znf_b1h_alignment/ZNF717-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF717-204/neg_patterns.ENCSR987KYK_ChIP_ZNF717_K562_ENCSR152ILV_counts_pattern_1.n_134-vs-ZNF717-204.alignment counts-znf_b1h_alignment/ZNF717-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF717-204/neg_patterns.ENCSR987KYK_ChIP_ZNF717_K562_ENCSR152ILV_counts_pattern_2.n_61-vs-ZNF717-204.alignment counts-znf_b1h_alignment/ZNF717-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF717-204/neg_patterns.ENCSR987KYK_ChIP_ZNF717_K562_ENCSR152ILV_counts_pattern_3.n_50-vs-ZNF717-204.alignment counts-znf_b1h_alignment/ZNF717-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF717-204/neg_patterns.ENCSR987KYK_ChIP_ZNF717_K562_ENCSR152ILV_counts_pattern_4.n_45-vs-ZNF717-204.alignment counts-znf_b1h_alignment/ZNF717-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF717-204/neg_patterns.ENCSR987KYK_ChIP_ZNF717_K562_ENCSR152ILV_counts_pattern_5.n_43-vs-ZNF717-204.alignment counts-znf_b1h_alignment/ZNF717-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF717-204/neg_patterns.ENCSR987KYK_ChIP_ZNF717_K562_ENCSR152ILV_counts_pattern_6.n_42-vs-ZNF717-204.alignment counts-znf_b1h_alignment/ZNF717-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF717-204/neg_patterns.ENCSR987KYK_ChIP_ZNF717_K562_ENCSR152ILV_counts_pattern_7.n_40-vs-ZNF717-204.alignment counts-znf_b1h_alignment/ZNF717-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF717-204/neg_patterns.ENCSR987KYK_ChIP_ZNF717_K562_ENCSR152ILV_counts_pattern_8.n_34-vs-ZNF717-204.alignment counts-znf_b1h_alignment/ZNF717-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF717-204/neg_patterns.ENCSR987KYK_ChIP_ZNF717_K562_ENCSR152ILV_counts_pattern_9.n_33-vs-ZNF717-204.alignment counts-znf_b1h_alignment/ZNF717-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF717-204/pos_patterns.ENCSR987KYK_ChIP_ZNF717_K562_ENCSR152ILV_counts_pattern_0.n_106-vs-ZNF717-204.alignment counts-znf_b1h_alignment/ZNF717-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF717-204/pos_patterns.ENCSR987KYK_ChIP_ZNF717_K562_ENCSR152ILV_counts_pattern_10.n_33-vs-ZNF717-204.alignment counts-znf_b1h_alignment/ZNF717-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF717-204/pos_patterns.ENCSR987KYK_ChIP_ZNF717_K562_ENCSR152ILV_counts_pattern_11.n_32-vs-ZNF717-204.alignment counts-znf_b1h_alignment/ZNF717-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF717-204/pos_patterns.ENCSR987KYK_ChIP_ZNF717_K562_ENCSR152ILV_counts_pattern_12.n_31-vs-ZNF717-204.alignment counts-znf_b1h_alignment/ZNF717-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF717-204/pos_patterns.ENCSR987KYK_ChIP_ZNF717_K562_ENCSR152ILV_counts_pattern_13.n_28-vs-ZNF717-204.alignment counts-znf_b1h_alignment/ZNF717-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF717-204/pos_patterns.ENCSR987KYK_ChIP_ZNF717_K562_ENCSR152ILV_counts_pattern_14.n_24-vs-ZNF717-204.alignment counts-znf_b1h_alignment/ZNF717-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF717-204/pos_patterns.ENCSR987KYK_ChIP_ZNF717_K562_ENCSR152ILV_counts_pattern_15.n_23-vs-ZNF717-204.alignment counts-znf_b1h_alignment/ZNF717-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF717-204/pos_patterns.ENCSR987KYK_ChIP_ZNF717_K562_ENCSR152ILV_counts_pattern_16.n_22-vs-ZNF717-204.alignment counts-znf_b1h_alignment/ZNF717-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF717-204/pos_patterns.ENCSR987KYK_ChIP_ZNF717_K562_ENCSR152ILV_counts_pattern_17.n_21-vs-ZNF717-204.alignment counts-znf_b1h_alignment/ZNF717-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF717-204/pos_patterns.ENCSR987KYK_ChIP_ZNF717_K562_ENCSR152ILV_counts_pattern_18.n_20-vs-ZNF717-204.alignment counts-znf_b1h_alignment/ZNF717-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF717-204/pos_patterns.ENCSR987KYK_ChIP_ZNF717_K562_ENCSR152ILV_counts_pattern_1.n_92-vs-ZNF717-204.alignment counts-znf_b1h_alignment/ZNF717-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF717-204/pos_patterns.ENCSR987KYK_ChIP_ZNF717_K562_ENCSR152ILV_counts_pattern_2.n_85-vs-ZNF717-204.alignment counts-znf_b1h_alignment/ZNF717-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF717-204/pos_patterns.ENCSR987KYK_ChIP_ZNF717_K562_ENCSR152ILV_counts_pattern_3.n_60-vs-ZNF717-204.alignment counts-znf_b1h_alignment/ZNF717-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF717-204/pos_patterns.ENCSR987KYK_ChIP_ZNF717_K562_ENCSR152ILV_counts_pattern_4.n_47-vs-ZNF717-204.alignment counts-znf_b1h_alignment/ZNF717-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF717-204/pos_patterns.ENCSR987KYK_ChIP_ZNF717_K562_ENCSR152ILV_counts_pattern_5.n_45-vs-ZNF717-204.alignment counts-znf_b1h_alignment/ZNF717-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF717-204/pos_patterns.ENCSR987KYK_ChIP_ZNF717_K562_ENCSR152ILV_counts_pattern_6.n_43-vs-ZNF717-204.alignment counts-znf_b1h_alignment/ZNF717-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF717-204/pos_patterns.ENCSR987KYK_ChIP_ZNF717_K562_ENCSR152ILV_counts_pattern_7.n_39-vs-ZNF717-204.alignment counts-znf_b1h_alignment/ZNF717-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF717-204/pos_patterns.ENCSR987KYK_ChIP_ZNF717_K562_ENCSR152ILV_counts_pattern_8.n_39-vs-ZNF717-204.alignment counts-znf_b1h_alignment/ZNF717-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF717-204/pos_patterns.ENCSR987KYK_ChIP_ZNF717_K562_ENCSR152ILV_counts_pattern_9.n_35-vs-ZNF717-204.alignment counts-znf_b1h_alignment/ZNF717-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF720-203/pos_patterns.ENCSR643XPG_ChIP_ZNF720_HepG2_ENCSR587FWS_counts_pattern_0.n_375-vs-ZNF720-203.alignment counts-znf_b1h_alignment/ZNF720-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF720-203/pos_patterns.ENCSR643XPG_ChIP_ZNF720_HepG2_ENCSR587FWS_counts_pattern_10.n_55-vs-ZNF720-203.alignment counts-znf_b1h_alignment/ZNF720-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF720-203/pos_patterns.ENCSR643XPG_ChIP_ZNF720_HepG2_ENCSR587FWS_counts_pattern_11.n_53-vs-ZNF720-203.alignment counts-znf_b1h_alignment/ZNF720-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF720-203/pos_patterns.ENCSR643XPG_ChIP_ZNF720_HepG2_ENCSR587FWS_counts_pattern_1.n_262-vs-ZNF720-203.alignment counts-znf_b1h_alignment/ZNF720-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF720-203/pos_patterns.ENCSR643XPG_ChIP_ZNF720_HepG2_ENCSR587FWS_counts_pattern_2.n_176-vs-ZNF720-203.alignment counts-znf_b1h_alignment/ZNF720-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF720-203/pos_patterns.ENCSR643XPG_ChIP_ZNF720_HepG2_ENCSR587FWS_counts_pattern_3.n_167-vs-ZNF720-203.alignment counts-znf_b1h_alignment/ZNF720-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF720-203/pos_patterns.ENCSR643XPG_ChIP_ZNF720_HepG2_ENCSR587FWS_counts_pattern_4.n_167-vs-ZNF720-203.alignment counts-znf_b1h_alignment/ZNF720-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF720-203/pos_patterns.ENCSR643XPG_ChIP_ZNF720_HepG2_ENCSR587FWS_counts_pattern_5.n_92-vs-ZNF720-203.alignment counts-znf_b1h_alignment/ZNF720-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF720-203/pos_patterns.ENCSR643XPG_ChIP_ZNF720_HepG2_ENCSR587FWS_counts_pattern_6.n_91-vs-ZNF720-203.alignment counts-znf_b1h_alignment/ZNF720-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF720-203/pos_patterns.ENCSR643XPG_ChIP_ZNF720_HepG2_ENCSR587FWS_counts_pattern_7.n_73-vs-ZNF720-203.alignment counts-znf_b1h_alignment/ZNF720-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF720-203/pos_patterns.ENCSR643XPG_ChIP_ZNF720_HepG2_ENCSR587FWS_counts_pattern_8.n_73-vs-ZNF720-203.alignment counts-znf_b1h_alignment/ZNF720-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF720-203/pos_patterns.ENCSR643XPG_ChIP_ZNF720_HepG2_ENCSR587FWS_counts_pattern_9.n_57-vs-ZNF720-203.alignment counts-znf_b1h_alignment/ZNF720-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/ChipExo_models_ZNF7_counts-pos.pattern_0.n_209-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/ChipExo_models_ZNF7_counts-pos.pattern_1.n_48-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/ChipExo_models_ZNF7_counts-pos.pattern_2.n_21-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/neg_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_counts_pattern_0.n_1117-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/neg_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_counts_pattern_10.n_49-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/neg_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_counts_pattern_11.n_45-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/neg_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_counts_pattern_12.n_40-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/neg_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_counts_pattern_13.n_30-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/neg_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_counts_pattern_14.n_23-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/neg_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_counts_pattern_1.n_239-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/neg_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_counts_pattern_2.n_175-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/neg_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_counts_pattern_3.n_146-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/neg_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_counts_pattern_4.n_77-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/neg_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_counts_pattern_5.n_63-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/neg_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_counts_pattern_6.n_63-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/neg_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_counts_pattern_7.n_59-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/neg_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_counts_pattern_8.n_51-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/neg_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_counts_pattern_9.n_49-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/neg_patterns.ENCSR553QMC_ChIP_ZNF7_HepG2_ENCSR132EAW_counts_pattern_0.n_64-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/neg_patterns.ENCSR553QMC_ChIP_ZNF7_HepG2_ENCSR132EAW_counts_pattern_1.n_59-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/neg_patterns.ENCSR553QMC_ChIP_ZNF7_HepG2_ENCSR132EAW_counts_pattern_2.n_39-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/neg_patterns.ENCSR553QMC_ChIP_ZNF7_HepG2_ENCSR132EAW_counts_pattern_3.n_36-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/neg_patterns.ENCSR553QMC_ChIP_ZNF7_HepG2_ENCSR132EAW_counts_pattern_4.n_32-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/neg_patterns.ENCSR553QMC_ChIP_ZNF7_HepG2_ENCSR132EAW_counts_pattern_5.n_29-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_counts_pattern_0.n_3363-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_counts_pattern_10.n_127-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_counts_pattern_11.n_111-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_counts_pattern_12.n_46-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_counts_pattern_13.n_46-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_counts_pattern_14.n_30-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_counts_pattern_15.n_29-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_counts_pattern_1.n_2044-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_counts_pattern_2.n_498-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_counts_pattern_3.n_457-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_counts_pattern_4.n_237-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_counts_pattern_5.n_202-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_counts_pattern_6.n_178-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_counts_pattern_7.n_172-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_counts_pattern_8.n_138-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_counts_pattern_9.n_138-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR553QMC_ChIP_ZNF7_HepG2_ENCSR132EAW_counts_pattern_0.n_5367-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR553QMC_ChIP_ZNF7_HepG2_ENCSR132EAW_counts_pattern_1.n_847-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR553QMC_ChIP_ZNF7_HepG2_ENCSR132EAW_counts_pattern_2.n_325-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR553QMC_ChIP_ZNF7_HepG2_ENCSR132EAW_counts_pattern_3.n_266-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR553QMC_ChIP_ZNF7_HepG2_ENCSR132EAW_counts_pattern_4.n_59-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR553QMC_ChIP_ZNF7_HepG2_ENCSR132EAW_counts_pattern_5.n_39-vs-ZNF7-202.alignment counts-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF730-202/ChipExo_models_ZNF730_counts-neg.pattern_0.n_49-vs-ZNF730-202.alignment counts-znf_b1h_alignment/ZNF730-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF730-202/ChipExo_models_ZNF730_counts-neg.pattern_1.n_47-vs-ZNF730-202.alignment counts-znf_b1h_alignment/ZNF730-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF730-202/ChipExo_models_ZNF730_counts-neg.pattern_2.n_37-vs-ZNF730-202.alignment counts-znf_b1h_alignment/ZNF730-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF730-202/ChipExo_models_ZNF730_counts-neg.pattern_3.n_22-vs-ZNF730-202.alignment counts-znf_b1h_alignment/ZNF730-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF730-202/ChipExo_models_ZNF730_counts-pos.pattern_0.n_139-vs-ZNF730-202.alignment counts-znf_b1h_alignment/ZNF730-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF730-202/ChipExo_models_ZNF730_counts-pos.pattern_10.n_58-vs-ZNF730-202.alignment counts-znf_b1h_alignment/ZNF730-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF730-202/ChipExo_models_ZNF730_counts-pos.pattern_11.n_56-vs-ZNF730-202.alignment counts-znf_b1h_alignment/ZNF730-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF730-202/ChipExo_models_ZNF730_counts-pos.pattern_12.n_52-vs-ZNF730-202.alignment counts-znf_b1h_alignment/ZNF730-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF730-202/ChipExo_models_ZNF730_counts-pos.pattern_13.n_44-vs-ZNF730-202.alignment counts-znf_b1h_alignment/ZNF730-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF730-202/ChipExo_models_ZNF730_counts-pos.pattern_14.n_43-vs-ZNF730-202.alignment counts-znf_b1h_alignment/ZNF730-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF730-202/ChipExo_models_ZNF730_counts-pos.pattern_15.n_30-vs-ZNF730-202.alignment counts-znf_b1h_alignment/ZNF730-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF730-202/ChipExo_models_ZNF730_counts-pos.pattern_1.n_136-vs-ZNF730-202.alignment counts-znf_b1h_alignment/ZNF730-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF730-202/ChipExo_models_ZNF730_counts-pos.pattern_2.n_132-vs-ZNF730-202.alignment counts-znf_b1h_alignment/ZNF730-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF730-202/ChipExo_models_ZNF730_counts-pos.pattern_3.n_126-vs-ZNF730-202.alignment counts-znf_b1h_alignment/ZNF730-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF730-202/ChipExo_models_ZNF730_counts-pos.pattern_4.n_90-vs-ZNF730-202.alignment counts-znf_b1h_alignment/ZNF730-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF730-202/ChipExo_models_ZNF730_counts-pos.pattern_5.n_89-vs-ZNF730-202.alignment counts-znf_b1h_alignment/ZNF730-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF730-202/ChipExo_models_ZNF730_counts-pos.pattern_6.n_88-vs-ZNF730-202.alignment counts-znf_b1h_alignment/ZNF730-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF730-202/ChipExo_models_ZNF730_counts-pos.pattern_7.n_87-vs-ZNF730-202.alignment counts-znf_b1h_alignment/ZNF730-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF730-202/ChipExo_models_ZNF730_counts-pos.pattern_8.n_71-vs-ZNF730-202.alignment counts-znf_b1h_alignment/ZNF730-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF730-202/ChipExo_models_ZNF730_counts-pos.pattern_9.n_60-vs-ZNF730-202.alignment counts-znf_b1h_alignment/ZNF730-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF736-201/ChipExo_models_ZNF736_counts-pos.pattern_0.n_6395-vs-ZNF736-201.alignment counts-znf_b1h_alignment/ZNF736-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF736-201/ChipExo_models_ZNF736_counts-pos.pattern_1.n_83-vs-ZNF736-201.alignment counts-znf_b1h_alignment/ZNF736-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF736-201/ChipExo_models_ZNF736_counts-pos.pattern_2.n_62-vs-ZNF736-201.alignment counts-znf_b1h_alignment/ZNF736-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF737-201/ChipExo_models_ZNF737_counts-pos.pattern_0.n_39-vs-ZNF737-201.alignment counts-znf_b1h_alignment/ZNF737-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF737-201/ChipExo_models_ZNF737_counts-pos.pattern_1.n_26-vs-ZNF737-201.alignment counts-znf_b1h_alignment/ZNF737-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF737-201/neg_patterns.ENCSR127IHN_ChIP_ZNF737_HepG2_ENCSR042DVQ_counts_pattern_0.n_452-vs-ZNF737-201.alignment counts-znf_b1h_alignment/ZNF737-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF737-201/neg_patterns.ENCSR127IHN_ChIP_ZNF737_HepG2_ENCSR042DVQ_counts_pattern_1.n_169-vs-ZNF737-201.alignment counts-znf_b1h_alignment/ZNF737-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF737-201/neg_patterns.ENCSR127IHN_ChIP_ZNF737_HepG2_ENCSR042DVQ_counts_pattern_2.n_169-vs-ZNF737-201.alignment counts-znf_b1h_alignment/ZNF737-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF737-201/neg_patterns.ENCSR127IHN_ChIP_ZNF737_HepG2_ENCSR042DVQ_counts_pattern_3.n_46-vs-ZNF737-201.alignment counts-znf_b1h_alignment/ZNF737-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF737-201/pos_patterns.ENCSR127IHN_ChIP_ZNF737_HepG2_ENCSR042DVQ_counts_pattern_0.n_563-vs-ZNF737-201.alignment counts-znf_b1h_alignment/ZNF737-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF737-201/pos_patterns.ENCSR127IHN_ChIP_ZNF737_HepG2_ENCSR042DVQ_counts_pattern_10.n_81-vs-ZNF737-201.alignment counts-znf_b1h_alignment/ZNF737-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF737-201/pos_patterns.ENCSR127IHN_ChIP_ZNF737_HepG2_ENCSR042DVQ_counts_pattern_11.n_62-vs-ZNF737-201.alignment counts-znf_b1h_alignment/ZNF737-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF737-201/pos_patterns.ENCSR127IHN_ChIP_ZNF737_HepG2_ENCSR042DVQ_counts_pattern_12.n_54-vs-ZNF737-201.alignment counts-znf_b1h_alignment/ZNF737-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF737-201/pos_patterns.ENCSR127IHN_ChIP_ZNF737_HepG2_ENCSR042DVQ_counts_pattern_13.n_51-vs-ZNF737-201.alignment counts-znf_b1h_alignment/ZNF737-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF737-201/pos_patterns.ENCSR127IHN_ChIP_ZNF737_HepG2_ENCSR042DVQ_counts_pattern_14.n_38-vs-ZNF737-201.alignment counts-znf_b1h_alignment/ZNF737-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF737-201/pos_patterns.ENCSR127IHN_ChIP_ZNF737_HepG2_ENCSR042DVQ_counts_pattern_15.n_27-vs-ZNF737-201.alignment counts-znf_b1h_alignment/ZNF737-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF737-201/pos_patterns.ENCSR127IHN_ChIP_ZNF737_HepG2_ENCSR042DVQ_counts_pattern_16.n_24-vs-ZNF737-201.alignment counts-znf_b1h_alignment/ZNF737-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF737-201/pos_patterns.ENCSR127IHN_ChIP_ZNF737_HepG2_ENCSR042DVQ_counts_pattern_17.n_22-vs-ZNF737-201.alignment counts-znf_b1h_alignment/ZNF737-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF737-201/pos_patterns.ENCSR127IHN_ChIP_ZNF737_HepG2_ENCSR042DVQ_counts_pattern_1.n_285-vs-ZNF737-201.alignment counts-znf_b1h_alignment/ZNF737-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF737-201/pos_patterns.ENCSR127IHN_ChIP_ZNF737_HepG2_ENCSR042DVQ_counts_pattern_2.n_215-vs-ZNF737-201.alignment counts-znf_b1h_alignment/ZNF737-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF737-201/pos_patterns.ENCSR127IHN_ChIP_ZNF737_HepG2_ENCSR042DVQ_counts_pattern_3.n_190-vs-ZNF737-201.alignment counts-znf_b1h_alignment/ZNF737-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF737-201/pos_patterns.ENCSR127IHN_ChIP_ZNF737_HepG2_ENCSR042DVQ_counts_pattern_4.n_189-vs-ZNF737-201.alignment counts-znf_b1h_alignment/ZNF737-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF737-201/pos_patterns.ENCSR127IHN_ChIP_ZNF737_HepG2_ENCSR042DVQ_counts_pattern_5.n_170-vs-ZNF737-201.alignment counts-znf_b1h_alignment/ZNF737-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF737-201/pos_patterns.ENCSR127IHN_ChIP_ZNF737_HepG2_ENCSR042DVQ_counts_pattern_6.n_147-vs-ZNF737-201.alignment counts-znf_b1h_alignment/ZNF737-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF737-201/pos_patterns.ENCSR127IHN_ChIP_ZNF737_HepG2_ENCSR042DVQ_counts_pattern_7.n_110-vs-ZNF737-201.alignment counts-znf_b1h_alignment/ZNF737-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF737-201/pos_patterns.ENCSR127IHN_ChIP_ZNF737_HepG2_ENCSR042DVQ_counts_pattern_8.n_103-vs-ZNF737-201.alignment counts-znf_b1h_alignment/ZNF737-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF737-201/pos_patterns.ENCSR127IHN_ChIP_ZNF737_HepG2_ENCSR042DVQ_counts_pattern_9.n_98-vs-ZNF737-201.alignment counts-znf_b1h_alignment/ZNF737-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF740-201/pos_patterns.ENCSR427XYP_ChIP_ZNF740_K562_ENCSR563SSN_counts_pattern_0.n_5804-vs-ZNF740-201.alignment counts-znf_b1h_alignment/ZNF740-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF740-201/pos_patterns.ENCSR427XYP_ChIP_ZNF740_K562_ENCSR563SSN_counts_pattern_1.n_1114-vs-ZNF740-201.alignment counts-znf_b1h_alignment/ZNF740-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF740-201/pos_patterns.ENCSR427XYP_ChIP_ZNF740_K562_ENCSR563SSN_counts_pattern_2.n_189-vs-ZNF740-201.alignment counts-znf_b1h_alignment/ZNF740-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF740-201/pos_patterns.ENCSR427XYP_ChIP_ZNF740_K562_ENCSR563SSN_counts_pattern_3.n_147-vs-ZNF740-201.alignment counts-znf_b1h_alignment/ZNF740-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF740-201/pos_patterns.ENCSR532EMP_ChIP_ZNF740_K562_ENCSR182PVT_counts_pattern_0.n_2309-vs-ZNF740-201.alignment counts-znf_b1h_alignment/ZNF740-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF740-201/pos_patterns.ENCSR532EMP_ChIP_ZNF740_K562_ENCSR182PVT_counts_pattern_1.n_56-vs-ZNF740-201.alignment counts-znf_b1h_alignment/ZNF740-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF740-201/pos_patterns.ENCSR737UST_ChIP_ZNF740_K562_ENCSR880BCZ_counts_pattern_0.n_4318-vs-ZNF740-201.alignment counts-znf_b1h_alignment/ZNF740-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF740-201/pos_patterns.ENCSR737UST_ChIP_ZNF740_K562_ENCSR880BCZ_counts_pattern_1.n_483-vs-ZNF740-201.alignment counts-znf_b1h_alignment/ZNF740-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF740-201/pos_patterns.ENCSR737UST_ChIP_ZNF740_K562_ENCSR880BCZ_counts_pattern_2.n_64-vs-ZNF740-201.alignment counts-znf_b1h_alignment/ZNF740-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF740-201/pos_patterns.ENCSR755ZAY_ChIP_ZNF740_HepG2_ENCSR726XMS_counts_pattern_0.n_3292-vs-ZNF740-201.alignment counts-znf_b1h_alignment/ZNF740-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF740-201/pos_patterns.ENCSR755ZAY_ChIP_ZNF740_HepG2_ENCSR726XMS_counts_pattern_1.n_683-vs-ZNF740-201.alignment counts-znf_b1h_alignment/ZNF740-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF740-201/pos_patterns.ENCSR755ZAY_ChIP_ZNF740_HepG2_ENCSR726XMS_counts_pattern_2.n_105-vs-ZNF740-201.alignment counts-znf_b1h_alignment/ZNF740-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF74-201/ChipExo_models_ZNF74_counts-pos.pattern_0.n_248-vs-ZNF74-201.alignment counts-znf_b1h_alignment/ZNF74-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF74-201/ChipExo_models_ZNF74_counts-pos.pattern_1.n_29-vs-ZNF74-201.alignment counts-znf_b1h_alignment/ZNF74-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF746-201/pos_patterns.ENCSR591MYB_ChIP_ZNF746_HepG2_ENCSR922IZN_counts_pattern_0.n_2738-vs-ZNF746-201.alignment counts-znf_b1h_alignment/ZNF746-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF746-201/pos_patterns.ENCSR591MYB_ChIP_ZNF746_HepG2_ENCSR922IZN_counts_pattern_1.n_1818-vs-ZNF746-201.alignment counts-znf_b1h_alignment/ZNF746-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF746-201/pos_patterns.ENCSR591MYB_ChIP_ZNF746_HepG2_ENCSR922IZN_counts_pattern_2.n_1626-vs-ZNF746-201.alignment counts-znf_b1h_alignment/ZNF746-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF746-201/pos_patterns.ENCSR591MYB_ChIP_ZNF746_HepG2_ENCSR922IZN_counts_pattern_3.n_832-vs-ZNF746-201.alignment counts-znf_b1h_alignment/ZNF746-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF746-201/pos_patterns.ENCSR591MYB_ChIP_ZNF746_HepG2_ENCSR922IZN_counts_pattern_4.n_418-vs-ZNF746-201.alignment counts-znf_b1h_alignment/ZNF746-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF746-201/pos_patterns.ENCSR591MYB_ChIP_ZNF746_HepG2_ENCSR922IZN_counts_pattern_5.n_188-vs-ZNF746-201.alignment counts-znf_b1h_alignment/ZNF746-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF746-201/pos_patterns.ENCSR591MYB_ChIP_ZNF746_HepG2_ENCSR922IZN_counts_pattern_6.n_127-vs-ZNF746-201.alignment counts-znf_b1h_alignment/ZNF746-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF746-201/pos_patterns.ENCSR591MYB_ChIP_ZNF746_HepG2_ENCSR922IZN_counts_pattern_7.n_118-vs-ZNF746-201.alignment counts-znf_b1h_alignment/ZNF746-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF746-201/pos_patterns.ENCSR591MYB_ChIP_ZNF746_HepG2_ENCSR922IZN_counts_pattern_8.n_57-vs-ZNF746-201.alignment counts-znf_b1h_alignment/ZNF746-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF746-201/pos_patterns.ENCSR591MYB_ChIP_ZNF746_HepG2_ENCSR922IZN_counts_pattern_9.n_27-vs-ZNF746-201.alignment counts-znf_b1h_alignment/ZNF746-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF747-203/pos_patterns.ENCSR155IXY_ChIP_ZNF747_HepG2_ENCSR604MQF_counts_pattern_0.n_2153-vs-ZNF747-203.alignment counts-znf_b1h_alignment/ZNF747-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF747-203/pos_patterns.ENCSR155IXY_ChIP_ZNF747_HepG2_ENCSR604MQF_counts_pattern_10.n_294-vs-ZNF747-203.alignment counts-znf_b1h_alignment/ZNF747-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF747-203/pos_patterns.ENCSR155IXY_ChIP_ZNF747_HepG2_ENCSR604MQF_counts_pattern_11.n_253-vs-ZNF747-203.alignment counts-znf_b1h_alignment/ZNF747-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF747-203/pos_patterns.ENCSR155IXY_ChIP_ZNF747_HepG2_ENCSR604MQF_counts_pattern_12.n_232-vs-ZNF747-203.alignment counts-znf_b1h_alignment/ZNF747-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF747-203/pos_patterns.ENCSR155IXY_ChIP_ZNF747_HepG2_ENCSR604MQF_counts_pattern_13.n_178-vs-ZNF747-203.alignment counts-znf_b1h_alignment/ZNF747-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF747-203/pos_patterns.ENCSR155IXY_ChIP_ZNF747_HepG2_ENCSR604MQF_counts_pattern_14.n_156-vs-ZNF747-203.alignment counts-znf_b1h_alignment/ZNF747-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF747-203/pos_patterns.ENCSR155IXY_ChIP_ZNF747_HepG2_ENCSR604MQF_counts_pattern_15.n_94-vs-ZNF747-203.alignment counts-znf_b1h_alignment/ZNF747-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF747-203/pos_patterns.ENCSR155IXY_ChIP_ZNF747_HepG2_ENCSR604MQF_counts_pattern_16.n_65-vs-ZNF747-203.alignment counts-znf_b1h_alignment/ZNF747-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF747-203/pos_patterns.ENCSR155IXY_ChIP_ZNF747_HepG2_ENCSR604MQF_counts_pattern_1.n_1989-vs-ZNF747-203.alignment counts-znf_b1h_alignment/ZNF747-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF747-203/pos_patterns.ENCSR155IXY_ChIP_ZNF747_HepG2_ENCSR604MQF_counts_pattern_2.n_1793-vs-ZNF747-203.alignment counts-znf_b1h_alignment/ZNF747-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF747-203/pos_patterns.ENCSR155IXY_ChIP_ZNF747_HepG2_ENCSR604MQF_counts_pattern_3.n_1497-vs-ZNF747-203.alignment counts-znf_b1h_alignment/ZNF747-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF747-203/pos_patterns.ENCSR155IXY_ChIP_ZNF747_HepG2_ENCSR604MQF_counts_pattern_4.n_983-vs-ZNF747-203.alignment counts-znf_b1h_alignment/ZNF747-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF747-203/pos_patterns.ENCSR155IXY_ChIP_ZNF747_HepG2_ENCSR604MQF_counts_pattern_5.n_675-vs-ZNF747-203.alignment counts-znf_b1h_alignment/ZNF747-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF747-203/pos_patterns.ENCSR155IXY_ChIP_ZNF747_HepG2_ENCSR604MQF_counts_pattern_6.n_518-vs-ZNF747-203.alignment counts-znf_b1h_alignment/ZNF747-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF747-203/pos_patterns.ENCSR155IXY_ChIP_ZNF747_HepG2_ENCSR604MQF_counts_pattern_7.n_501-vs-ZNF747-203.alignment counts-znf_b1h_alignment/ZNF747-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF747-203/pos_patterns.ENCSR155IXY_ChIP_ZNF747_HepG2_ENCSR604MQF_counts_pattern_8.n_447-vs-ZNF747-203.alignment counts-znf_b1h_alignment/ZNF747-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF747-203/pos_patterns.ENCSR155IXY_ChIP_ZNF747_HepG2_ENCSR604MQF_counts_pattern_9.n_415-vs-ZNF747-203.alignment counts-znf_b1h_alignment/ZNF747-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF747-203/pos_patterns.ENCSR497IAS_ChIP_ZNF747_HEK293_ENCSR043SQO_counts_pattern_0.n_248-vs-ZNF747-203.alignment counts-znf_b1h_alignment/ZNF747-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF747-203/pos_patterns.ENCSR497IAS_ChIP_ZNF747_HEK293_ENCSR043SQO_counts_pattern_1.n_150-vs-ZNF747-203.alignment counts-znf_b1h_alignment/ZNF747-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF747-203/pos_patterns.ENCSR497IAS_ChIP_ZNF747_HEK293_ENCSR043SQO_counts_pattern_2.n_46-vs-ZNF747-203.alignment counts-znf_b1h_alignment/ZNF747-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF747-203/pos_patterns.ENCSR497IAS_ChIP_ZNF747_HEK293_ENCSR043SQO_counts_pattern_3.n_23-vs-ZNF747-203.alignment counts-znf_b1h_alignment/ZNF747-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF749-201/ChipExo_models_ZNF749_counts-pos.pattern_0.n_347-vs-ZNF749-201.alignment counts-znf_b1h_alignment/ZNF749-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF749-201/pos_patterns.ENCSR125MLR_ChIP_ZNF749_HepG2_ENCSR275IFD_counts_pattern_0.n_2428-vs-ZNF749-201.alignment counts-znf_b1h_alignment/ZNF749-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF749-201/pos_patterns.ENCSR125MLR_ChIP_ZNF749_HepG2_ENCSR275IFD_counts_pattern_10.n_115-vs-ZNF749-201.alignment counts-znf_b1h_alignment/ZNF749-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF749-201/pos_patterns.ENCSR125MLR_ChIP_ZNF749_HepG2_ENCSR275IFD_counts_pattern_11.n_113-vs-ZNF749-201.alignment counts-znf_b1h_alignment/ZNF749-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF749-201/pos_patterns.ENCSR125MLR_ChIP_ZNF749_HepG2_ENCSR275IFD_counts_pattern_12.n_100-vs-ZNF749-201.alignment counts-znf_b1h_alignment/ZNF749-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF749-201/pos_patterns.ENCSR125MLR_ChIP_ZNF749_HepG2_ENCSR275IFD_counts_pattern_13.n_84-vs-ZNF749-201.alignment counts-znf_b1h_alignment/ZNF749-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF749-201/pos_patterns.ENCSR125MLR_ChIP_ZNF749_HepG2_ENCSR275IFD_counts_pattern_14.n_23-vs-ZNF749-201.alignment counts-znf_b1h_alignment/ZNF749-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF749-201/pos_patterns.ENCSR125MLR_ChIP_ZNF749_HepG2_ENCSR275IFD_counts_pattern_1.n_1957-vs-ZNF749-201.alignment counts-znf_b1h_alignment/ZNF749-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF749-201/pos_patterns.ENCSR125MLR_ChIP_ZNF749_HepG2_ENCSR275IFD_counts_pattern_2.n_1316-vs-ZNF749-201.alignment counts-znf_b1h_alignment/ZNF749-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF749-201/pos_patterns.ENCSR125MLR_ChIP_ZNF749_HepG2_ENCSR275IFD_counts_pattern_3.n_807-vs-ZNF749-201.alignment counts-znf_b1h_alignment/ZNF749-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF749-201/pos_patterns.ENCSR125MLR_ChIP_ZNF749_HepG2_ENCSR275IFD_counts_pattern_4.n_325-vs-ZNF749-201.alignment counts-znf_b1h_alignment/ZNF749-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF749-201/pos_patterns.ENCSR125MLR_ChIP_ZNF749_HepG2_ENCSR275IFD_counts_pattern_5.n_310-vs-ZNF749-201.alignment counts-znf_b1h_alignment/ZNF749-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF749-201/pos_patterns.ENCSR125MLR_ChIP_ZNF749_HepG2_ENCSR275IFD_counts_pattern_6.n_300-vs-ZNF749-201.alignment counts-znf_b1h_alignment/ZNF749-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF749-201/pos_patterns.ENCSR125MLR_ChIP_ZNF749_HepG2_ENCSR275IFD_counts_pattern_7.n_282-vs-ZNF749-201.alignment counts-znf_b1h_alignment/ZNF749-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF749-201/pos_patterns.ENCSR125MLR_ChIP_ZNF749_HepG2_ENCSR275IFD_counts_pattern_8.n_208-vs-ZNF749-201.alignment counts-znf_b1h_alignment/ZNF749-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF749-201/pos_patterns.ENCSR125MLR_ChIP_ZNF749_HepG2_ENCSR275IFD_counts_pattern_9.n_203-vs-ZNF749-201.alignment counts-znf_b1h_alignment/ZNF749-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF75A-210/pos_patterns.ENCSR099MNR_ChIP_ZNF75A_K562_ENCSR319GCA_counts_pattern_0.n_2570-vs-ZNF75A-210.alignment counts-znf_b1h_alignment/ZNF75A-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF75A-210/pos_patterns.ENCSR099MNR_ChIP_ZNF75A_K562_ENCSR319GCA_counts_pattern_1.n_422-vs-ZNF75A-210.alignment counts-znf_b1h_alignment/ZNF75A-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF75A-210/pos_patterns.ENCSR099MNR_ChIP_ZNF75A_K562_ENCSR319GCA_counts_pattern_2.n_89-vs-ZNF75A-210.alignment counts-znf_b1h_alignment/ZNF75A-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF75A-210/pos_patterns.ENCSR099MNR_ChIP_ZNF75A_K562_ENCSR319GCA_counts_pattern_3.n_49-vs-ZNF75A-210.alignment counts-znf_b1h_alignment/ZNF75A-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF75A-210/pos_patterns.ENCSR099MNR_ChIP_ZNF75A_K562_ENCSR319GCA_counts_pattern_4.n_24-vs-ZNF75A-210.alignment counts-znf_b1h_alignment/ZNF75A-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF75D-201/ChipExo_models_ZNF75D_counts-pos.pattern_0.n_7462-vs-ZNF75D-201.alignment counts-znf_b1h_alignment/ZNF75D-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF75D-201/ChipExo_models_ZNF75D_counts-pos.pattern_1.n_62-vs-ZNF75D-201.alignment counts-znf_b1h_alignment/ZNF75D-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF75D-201/ChipExo_models_ZNF75D_counts-pos.pattern_2.n_42-vs-ZNF75D-201.alignment counts-znf_b1h_alignment/ZNF75D-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF75D-201/neg_patterns.ENCSR693TYT_ChIP_ZNF75D_HepG2_ENCSR005CWA_counts_pattern_0.n_50-vs-ZNF75D-201.alignment counts-znf_b1h_alignment/ZNF75D-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF75D-201/neg_patterns.ENCSR693TYT_ChIP_ZNF75D_HepG2_ENCSR005CWA_counts_pattern_1.n_41-vs-ZNF75D-201.alignment counts-znf_b1h_alignment/ZNF75D-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF75D-201/pos_patterns.ENCSR693TYT_ChIP_ZNF75D_HepG2_ENCSR005CWA_counts_pattern_0.n_525-vs-ZNF75D-201.alignment counts-znf_b1h_alignment/ZNF75D-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF75D-201/pos_patterns.ENCSR693TYT_ChIP_ZNF75D_HepG2_ENCSR005CWA_counts_pattern_10.n_63-vs-ZNF75D-201.alignment counts-znf_b1h_alignment/ZNF75D-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF75D-201/pos_patterns.ENCSR693TYT_ChIP_ZNF75D_HepG2_ENCSR005CWA_counts_pattern_11.n_31-vs-ZNF75D-201.alignment counts-znf_b1h_alignment/ZNF75D-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF75D-201/pos_patterns.ENCSR693TYT_ChIP_ZNF75D_HepG2_ENCSR005CWA_counts_pattern_12.n_30-vs-ZNF75D-201.alignment counts-znf_b1h_alignment/ZNF75D-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF75D-201/pos_patterns.ENCSR693TYT_ChIP_ZNF75D_HepG2_ENCSR005CWA_counts_pattern_1.n_312-vs-ZNF75D-201.alignment counts-znf_b1h_alignment/ZNF75D-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF75D-201/pos_patterns.ENCSR693TYT_ChIP_ZNF75D_HepG2_ENCSR005CWA_counts_pattern_2.n_187-vs-ZNF75D-201.alignment counts-znf_b1h_alignment/ZNF75D-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF75D-201/pos_patterns.ENCSR693TYT_ChIP_ZNF75D_HepG2_ENCSR005CWA_counts_pattern_3.n_180-vs-ZNF75D-201.alignment counts-znf_b1h_alignment/ZNF75D-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF75D-201/pos_patterns.ENCSR693TYT_ChIP_ZNF75D_HepG2_ENCSR005CWA_counts_pattern_4.n_161-vs-ZNF75D-201.alignment counts-znf_b1h_alignment/ZNF75D-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF75D-201/pos_patterns.ENCSR693TYT_ChIP_ZNF75D_HepG2_ENCSR005CWA_counts_pattern_5.n_129-vs-ZNF75D-201.alignment counts-znf_b1h_alignment/ZNF75D-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF75D-201/pos_patterns.ENCSR693TYT_ChIP_ZNF75D_HepG2_ENCSR005CWA_counts_pattern_6.n_109-vs-ZNF75D-201.alignment counts-znf_b1h_alignment/ZNF75D-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF75D-201/pos_patterns.ENCSR693TYT_ChIP_ZNF75D_HepG2_ENCSR005CWA_counts_pattern_7.n_106-vs-ZNF75D-201.alignment counts-znf_b1h_alignment/ZNF75D-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF75D-201/pos_patterns.ENCSR693TYT_ChIP_ZNF75D_HepG2_ENCSR005CWA_counts_pattern_8.n_77-vs-ZNF75D-201.alignment counts-znf_b1h_alignment/ZNF75D-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF75D-201/pos_patterns.ENCSR693TYT_ChIP_ZNF75D_HepG2_ENCSR005CWA_counts_pattern_9.n_66-vs-ZNF75D-201.alignment counts-znf_b1h_alignment/ZNF75D-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF761-202/pos_patterns.ENCSR622AMZ_ChIP_ZNF761_HepG2_ENCSR817NAC_counts_pattern_0.n_2591-vs-ZNF761-202.alignment counts-znf_b1h_alignment/ZNF761-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF761-202/pos_patterns.ENCSR622AMZ_ChIP_ZNF761_HepG2_ENCSR817NAC_counts_pattern_10.n_85-vs-ZNF761-202.alignment counts-znf_b1h_alignment/ZNF761-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF761-202/pos_patterns.ENCSR622AMZ_ChIP_ZNF761_HepG2_ENCSR817NAC_counts_pattern_11.n_79-vs-ZNF761-202.alignment counts-znf_b1h_alignment/ZNF761-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF761-202/pos_patterns.ENCSR622AMZ_ChIP_ZNF761_HepG2_ENCSR817NAC_counts_pattern_12.n_47-vs-ZNF761-202.alignment counts-znf_b1h_alignment/ZNF761-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF761-202/pos_patterns.ENCSR622AMZ_ChIP_ZNF761_HepG2_ENCSR817NAC_counts_pattern_13.n_45-vs-ZNF761-202.alignment counts-znf_b1h_alignment/ZNF761-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF761-202/pos_patterns.ENCSR622AMZ_ChIP_ZNF761_HepG2_ENCSR817NAC_counts_pattern_14.n_38-vs-ZNF761-202.alignment counts-znf_b1h_alignment/ZNF761-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF761-202/pos_patterns.ENCSR622AMZ_ChIP_ZNF761_HepG2_ENCSR817NAC_counts_pattern_15.n_37-vs-ZNF761-202.alignment counts-znf_b1h_alignment/ZNF761-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF761-202/pos_patterns.ENCSR622AMZ_ChIP_ZNF761_HepG2_ENCSR817NAC_counts_pattern_16.n_20-vs-ZNF761-202.alignment counts-znf_b1h_alignment/ZNF761-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF761-202/pos_patterns.ENCSR622AMZ_ChIP_ZNF761_HepG2_ENCSR817NAC_counts_pattern_1.n_1676-vs-ZNF761-202.alignment counts-znf_b1h_alignment/ZNF761-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF761-202/pos_patterns.ENCSR622AMZ_ChIP_ZNF761_HepG2_ENCSR817NAC_counts_pattern_2.n_1084-vs-ZNF761-202.alignment counts-znf_b1h_alignment/ZNF761-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF761-202/pos_patterns.ENCSR622AMZ_ChIP_ZNF761_HepG2_ENCSR817NAC_counts_pattern_3.n_337-vs-ZNF761-202.alignment counts-znf_b1h_alignment/ZNF761-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF761-202/pos_patterns.ENCSR622AMZ_ChIP_ZNF761_HepG2_ENCSR817NAC_counts_pattern_4.n_312-vs-ZNF761-202.alignment counts-znf_b1h_alignment/ZNF761-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF761-202/pos_patterns.ENCSR622AMZ_ChIP_ZNF761_HepG2_ENCSR817NAC_counts_pattern_5.n_180-vs-ZNF761-202.alignment counts-znf_b1h_alignment/ZNF761-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF761-202/pos_patterns.ENCSR622AMZ_ChIP_ZNF761_HepG2_ENCSR817NAC_counts_pattern_6.n_172-vs-ZNF761-202.alignment counts-znf_b1h_alignment/ZNF761-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF761-202/pos_patterns.ENCSR622AMZ_ChIP_ZNF761_HepG2_ENCSR817NAC_counts_pattern_7.n_171-vs-ZNF761-202.alignment counts-znf_b1h_alignment/ZNF761-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF761-202/pos_patterns.ENCSR622AMZ_ChIP_ZNF761_HepG2_ENCSR817NAC_counts_pattern_8.n_168-vs-ZNF761-202.alignment counts-znf_b1h_alignment/ZNF761-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF761-202/pos_patterns.ENCSR622AMZ_ChIP_ZNF761_HepG2_ENCSR817NAC_counts_pattern_9.n_146-vs-ZNF761-202.alignment counts-znf_b1h_alignment/ZNF761-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF76-201/Hughes_GR_models_ZNF76_counts-pos.pattern_0.n_3223-vs-ZNF76-201.alignment counts-znf_b1h_alignment/ZNF76-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF76-201/pos_patterns.ENCSR072LQF_ChIP_ZNF76_HEK293_ENCSR275URJ_counts_pattern_0.n_8121-vs-ZNF76-201.alignment counts-znf_b1h_alignment/ZNF76-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF76-201/pos_patterns.ENCSR072LQF_ChIP_ZNF76_HEK293_ENCSR275URJ_counts_pattern_1.n_352-vs-ZNF76-201.alignment counts-znf_b1h_alignment/ZNF76-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF76-201/pos_patterns.ENCSR072LQF_ChIP_ZNF76_HEK293_ENCSR275URJ_counts_pattern_2.n_332-vs-ZNF76-201.alignment counts-znf_b1h_alignment/ZNF76-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF76-201/pos_patterns.ENCSR072LQF_ChIP_ZNF76_HEK293_ENCSR275URJ_counts_pattern_3.n_240-vs-ZNF76-201.alignment counts-znf_b1h_alignment/ZNF76-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF76-201/pos_patterns.ENCSR072LQF_ChIP_ZNF76_HEK293_ENCSR275URJ_counts_pattern_4.n_26-vs-ZNF76-201.alignment counts-znf_b1h_alignment/ZNF76-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF76-201/pos_patterns.ENCSR257AFV_ChIP_ZNF76_K562_ENCSR681UKI_counts_pattern_0.n_1333-vs-ZNF76-201.alignment counts-znf_b1h_alignment/ZNF76-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF76-201/pos_patterns.ENCSR257AFV_ChIP_ZNF76_K562_ENCSR681UKI_counts_pattern_1.n_286-vs-ZNF76-201.alignment counts-znf_b1h_alignment/ZNF76-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF76-201/pos_patterns.ENCSR257AFV_ChIP_ZNF76_K562_ENCSR681UKI_counts_pattern_2.n_88-vs-ZNF76-201.alignment counts-znf_b1h_alignment/ZNF76-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF76-201/pos_patterns.ENCSR257AFV_ChIP_ZNF76_K562_ENCSR681UKI_counts_pattern_3.n_83-vs-ZNF76-201.alignment counts-znf_b1h_alignment/ZNF76-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF76-201/pos_patterns.ENCSR257AFV_ChIP_ZNF76_K562_ENCSR681UKI_counts_pattern_4.n_67-vs-ZNF76-201.alignment counts-znf_b1h_alignment/ZNF76-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF76-201/pos_patterns.ENCSR257AFV_ChIP_ZNF76_K562_ENCSR681UKI_counts_pattern_5.n_47-vs-ZNF76-201.alignment counts-znf_b1h_alignment/ZNF76-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF76-201/pos_patterns.ENCSR257AFV_ChIP_ZNF76_K562_ENCSR681UKI_counts_pattern_6.n_34-vs-ZNF76-201.alignment counts-znf_b1h_alignment/ZNF76-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF76-202/Hughes_GR_models_ZNF76_counts-pos.pattern_0.n_3223-vs-ZNF76-202.alignment counts-znf_b1h_alignment/ZNF76-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF76-202/pos_patterns.ENCSR072LQF_ChIP_ZNF76_HEK293_ENCSR275URJ_counts_pattern_0.n_8121-vs-ZNF76-202.alignment counts-znf_b1h_alignment/ZNF76-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF76-202/pos_patterns.ENCSR072LQF_ChIP_ZNF76_HEK293_ENCSR275URJ_counts_pattern_1.n_352-vs-ZNF76-202.alignment counts-znf_b1h_alignment/ZNF76-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF76-202/pos_patterns.ENCSR072LQF_ChIP_ZNF76_HEK293_ENCSR275URJ_counts_pattern_2.n_332-vs-ZNF76-202.alignment counts-znf_b1h_alignment/ZNF76-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF76-202/pos_patterns.ENCSR072LQF_ChIP_ZNF76_HEK293_ENCSR275URJ_counts_pattern_3.n_240-vs-ZNF76-202.alignment counts-znf_b1h_alignment/ZNF76-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF76-202/pos_patterns.ENCSR072LQF_ChIP_ZNF76_HEK293_ENCSR275URJ_counts_pattern_4.n_26-vs-ZNF76-202.alignment counts-znf_b1h_alignment/ZNF76-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF76-202/pos_patterns.ENCSR257AFV_ChIP_ZNF76_K562_ENCSR681UKI_counts_pattern_0.n_1333-vs-ZNF76-202.alignment counts-znf_b1h_alignment/ZNF76-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF76-202/pos_patterns.ENCSR257AFV_ChIP_ZNF76_K562_ENCSR681UKI_counts_pattern_1.n_286-vs-ZNF76-202.alignment counts-znf_b1h_alignment/ZNF76-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF76-202/pos_patterns.ENCSR257AFV_ChIP_ZNF76_K562_ENCSR681UKI_counts_pattern_2.n_88-vs-ZNF76-202.alignment counts-znf_b1h_alignment/ZNF76-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF76-202/pos_patterns.ENCSR257AFV_ChIP_ZNF76_K562_ENCSR681UKI_counts_pattern_3.n_83-vs-ZNF76-202.alignment counts-znf_b1h_alignment/ZNF76-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF76-202/pos_patterns.ENCSR257AFV_ChIP_ZNF76_K562_ENCSR681UKI_counts_pattern_4.n_67-vs-ZNF76-202.alignment counts-znf_b1h_alignment/ZNF76-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF76-202/pos_patterns.ENCSR257AFV_ChIP_ZNF76_K562_ENCSR681UKI_counts_pattern_5.n_47-vs-ZNF76-202.alignment counts-znf_b1h_alignment/ZNF76-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF76-202/pos_patterns.ENCSR257AFV_ChIP_ZNF76_K562_ENCSR681UKI_counts_pattern_6.n_34-vs-ZNF76-202.alignment counts-znf_b1h_alignment/ZNF76-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF76-209/Hughes_GR_models_ZNF76_counts-pos.pattern_0.n_3223-vs-ZNF76-209.alignment counts-znf_b1h_alignment/ZNF76-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF76-209/pos_patterns.ENCSR072LQF_ChIP_ZNF76_HEK293_ENCSR275URJ_counts_pattern_0.n_8121-vs-ZNF76-209.alignment counts-znf_b1h_alignment/ZNF76-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF76-209/pos_patterns.ENCSR072LQF_ChIP_ZNF76_HEK293_ENCSR275URJ_counts_pattern_1.n_352-vs-ZNF76-209.alignment counts-znf_b1h_alignment/ZNF76-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF76-209/pos_patterns.ENCSR072LQF_ChIP_ZNF76_HEK293_ENCSR275URJ_counts_pattern_2.n_332-vs-ZNF76-209.alignment counts-znf_b1h_alignment/ZNF76-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF76-209/pos_patterns.ENCSR072LQF_ChIP_ZNF76_HEK293_ENCSR275URJ_counts_pattern_3.n_240-vs-ZNF76-209.alignment counts-znf_b1h_alignment/ZNF76-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF76-209/pos_patterns.ENCSR072LQF_ChIP_ZNF76_HEK293_ENCSR275URJ_counts_pattern_4.n_26-vs-ZNF76-209.alignment counts-znf_b1h_alignment/ZNF76-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF76-209/pos_patterns.ENCSR257AFV_ChIP_ZNF76_K562_ENCSR681UKI_counts_pattern_0.n_1333-vs-ZNF76-209.alignment counts-znf_b1h_alignment/ZNF76-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF76-209/pos_patterns.ENCSR257AFV_ChIP_ZNF76_K562_ENCSR681UKI_counts_pattern_1.n_286-vs-ZNF76-209.alignment counts-znf_b1h_alignment/ZNF76-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF76-209/pos_patterns.ENCSR257AFV_ChIP_ZNF76_K562_ENCSR681UKI_counts_pattern_2.n_88-vs-ZNF76-209.alignment counts-znf_b1h_alignment/ZNF76-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF76-209/pos_patterns.ENCSR257AFV_ChIP_ZNF76_K562_ENCSR681UKI_counts_pattern_3.n_83-vs-ZNF76-209.alignment counts-znf_b1h_alignment/ZNF76-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF76-209/pos_patterns.ENCSR257AFV_ChIP_ZNF76_K562_ENCSR681UKI_counts_pattern_4.n_67-vs-ZNF76-209.alignment counts-znf_b1h_alignment/ZNF76-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF76-209/pos_patterns.ENCSR257AFV_ChIP_ZNF76_K562_ENCSR681UKI_counts_pattern_5.n_47-vs-ZNF76-209.alignment counts-znf_b1h_alignment/ZNF76-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF76-209/pos_patterns.ENCSR257AFV_ChIP_ZNF76_K562_ENCSR681UKI_counts_pattern_6.n_34-vs-ZNF76-209.alignment counts-znf_b1h_alignment/ZNF76-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF764-201/ChipExo_models_ZNF764_counts-pos.pattern_0.n_125-vs-ZNF764-201.alignment counts-znf_b1h_alignment/ZNF764-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF764-201/ChipExo_models_ZNF764_counts-pos.pattern_1.n_24-vs-ZNF764-201.alignment counts-znf_b1h_alignment/ZNF764-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF764-201/pos_patterns.ENCSR023OOE_ChIP_ZNF764_K562_ENCSR116QAW_counts_pattern_0.n_1070-vs-ZNF764-201.alignment counts-znf_b1h_alignment/ZNF764-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF764-201/pos_patterns.ENCSR023OOE_ChIP_ZNF764_K562_ENCSR116QAW_counts_pattern_10.n_20-vs-ZNF764-201.alignment counts-znf_b1h_alignment/ZNF764-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF764-201/pos_patterns.ENCSR023OOE_ChIP_ZNF764_K562_ENCSR116QAW_counts_pattern_1.n_499-vs-ZNF764-201.alignment counts-znf_b1h_alignment/ZNF764-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF764-201/pos_patterns.ENCSR023OOE_ChIP_ZNF764_K562_ENCSR116QAW_counts_pattern_2.n_121-vs-ZNF764-201.alignment counts-znf_b1h_alignment/ZNF764-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF764-201/pos_patterns.ENCSR023OOE_ChIP_ZNF764_K562_ENCSR116QAW_counts_pattern_3.n_74-vs-ZNF764-201.alignment counts-znf_b1h_alignment/ZNF764-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF764-201/pos_patterns.ENCSR023OOE_ChIP_ZNF764_K562_ENCSR116QAW_counts_pattern_4.n_72-vs-ZNF764-201.alignment counts-znf_b1h_alignment/ZNF764-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF764-201/pos_patterns.ENCSR023OOE_ChIP_ZNF764_K562_ENCSR116QAW_counts_pattern_5.n_44-vs-ZNF764-201.alignment counts-znf_b1h_alignment/ZNF764-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF764-201/pos_patterns.ENCSR023OOE_ChIP_ZNF764_K562_ENCSR116QAW_counts_pattern_6.n_44-vs-ZNF764-201.alignment counts-znf_b1h_alignment/ZNF764-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF764-201/pos_patterns.ENCSR023OOE_ChIP_ZNF764_K562_ENCSR116QAW_counts_pattern_7.n_38-vs-ZNF764-201.alignment counts-znf_b1h_alignment/ZNF764-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF764-201/pos_patterns.ENCSR023OOE_ChIP_ZNF764_K562_ENCSR116QAW_counts_pattern_8.n_37-vs-ZNF764-201.alignment counts-znf_b1h_alignment/ZNF764-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF764-201/pos_patterns.ENCSR023OOE_ChIP_ZNF764_K562_ENCSR116QAW_counts_pattern_9.n_21-vs-ZNF764-201.alignment counts-znf_b1h_alignment/ZNF764-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF765-201/ChipExo_models_ZNF765_counts-pos.pattern_0.n_3274-vs-ZNF765-201.alignment counts-znf_b1h_alignment/ZNF765-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF766-201/ChipExo_models_ZNF766_counts-pos.pattern_0.n_10386-vs-ZNF766-201.alignment counts-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF766-201/ChipExo_models_ZNF766_counts-pos.pattern_1.n_52-vs-ZNF766-201.alignment counts-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF766-201/ChipExo_models_ZNF766_counts-pos.pattern_2.n_33-vs-ZNF766-201.alignment counts-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF766-201/ChipExo_models_ZNF766_counts-pos.pattern_3.n_23-vs-ZNF766-201.alignment counts-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF766-201/neg_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_counts_pattern_0.n_23-vs-ZNF766-201.alignment counts-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_counts_pattern_0.n_8121-vs-ZNF766-201.alignment counts-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_counts_pattern_10.n_171-vs-ZNF766-201.alignment counts-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_counts_pattern_11.n_100-vs-ZNF766-201.alignment counts-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_counts_pattern_12.n_81-vs-ZNF766-201.alignment counts-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_counts_pattern_13.n_54-vs-ZNF766-201.alignment counts-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_counts_pattern_14.n_35-vs-ZNF766-201.alignment counts-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_counts_pattern_1.n_6282-vs-ZNF766-201.alignment counts-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_counts_pattern_2.n_2550-vs-ZNF766-201.alignment counts-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_counts_pattern_3.n_1092-vs-ZNF766-201.alignment counts-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_counts_pattern_4.n_1002-vs-ZNF766-201.alignment counts-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_counts_pattern_5.n_829-vs-ZNF766-201.alignment counts-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_counts_pattern_6.n_802-vs-ZNF766-201.alignment counts-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_counts_pattern_7.n_727-vs-ZNF766-201.alignment counts-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_counts_pattern_8.n_532-vs-ZNF766-201.alignment counts-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_counts_pattern_9.n_362-vs-ZNF766-201.alignment counts-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR869RSW_ChIP_ZNF766_HepG2_ENCSR220OPP_counts_pattern_0.n_2037-vs-ZNF766-201.alignment counts-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR869RSW_ChIP_ZNF766_HepG2_ENCSR220OPP_counts_pattern_10.n_263-vs-ZNF766-201.alignment counts-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR869RSW_ChIP_ZNF766_HepG2_ENCSR220OPP_counts_pattern_11.n_205-vs-ZNF766-201.alignment counts-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR869RSW_ChIP_ZNF766_HepG2_ENCSR220OPP_counts_pattern_12.n_182-vs-ZNF766-201.alignment counts-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR869RSW_ChIP_ZNF766_HepG2_ENCSR220OPP_counts_pattern_13.n_180-vs-ZNF766-201.alignment counts-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR869RSW_ChIP_ZNF766_HepG2_ENCSR220OPP_counts_pattern_14.n_162-vs-ZNF766-201.alignment counts-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR869RSW_ChIP_ZNF766_HepG2_ENCSR220OPP_counts_pattern_15.n_138-vs-ZNF766-201.alignment counts-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR869RSW_ChIP_ZNF766_HepG2_ENCSR220OPP_counts_pattern_16.n_121-vs-ZNF766-201.alignment counts-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR869RSW_ChIP_ZNF766_HepG2_ENCSR220OPP_counts_pattern_17.n_116-vs-ZNF766-201.alignment counts-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR869RSW_ChIP_ZNF766_HepG2_ENCSR220OPP_counts_pattern_18.n_95-vs-ZNF766-201.alignment counts-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR869RSW_ChIP_ZNF766_HepG2_ENCSR220OPP_counts_pattern_19.n_84-vs-ZNF766-201.alignment counts-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR869RSW_ChIP_ZNF766_HepG2_ENCSR220OPP_counts_pattern_1.n_1954-vs-ZNF766-201.alignment counts-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR869RSW_ChIP_ZNF766_HepG2_ENCSR220OPP_counts_pattern_20.n_82-vs-ZNF766-201.alignment counts-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR869RSW_ChIP_ZNF766_HepG2_ENCSR220OPP_counts_pattern_21.n_29-vs-ZNF766-201.alignment counts-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR869RSW_ChIP_ZNF766_HepG2_ENCSR220OPP_counts_pattern_22.n_21-vs-ZNF766-201.alignment counts-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR869RSW_ChIP_ZNF766_HepG2_ENCSR220OPP_counts_pattern_2.n_995-vs-ZNF766-201.alignment counts-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR869RSW_ChIP_ZNF766_HepG2_ENCSR220OPP_counts_pattern_3.n_995-vs-ZNF766-201.alignment counts-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR869RSW_ChIP_ZNF766_HepG2_ENCSR220OPP_counts_pattern_4.n_638-vs-ZNF766-201.alignment counts-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR869RSW_ChIP_ZNF766_HepG2_ENCSR220OPP_counts_pattern_5.n_480-vs-ZNF766-201.alignment counts-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR869RSW_ChIP_ZNF766_HepG2_ENCSR220OPP_counts_pattern_6.n_404-vs-ZNF766-201.alignment counts-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR869RSW_ChIP_ZNF766_HepG2_ENCSR220OPP_counts_pattern_7.n_354-vs-ZNF766-201.alignment counts-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR869RSW_ChIP_ZNF766_HepG2_ENCSR220OPP_counts_pattern_8.n_341-vs-ZNF766-201.alignment counts-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR869RSW_ChIP_ZNF766_HepG2_ENCSR220OPP_counts_pattern_9.n_333-vs-ZNF766-201.alignment counts-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF768-201/Hughes_GR_models_ZNF768_counts-pos.pattern_0.n_1761-vs-ZNF768-201.alignment counts-znf_b1h_alignment/ZNF768-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF768-201/Hughes_GR_models_ZNF768_counts-pos.pattern_1.n_1655-vs-ZNF768-201.alignment counts-znf_b1h_alignment/ZNF768-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/Hughes_GR_models_ZNF770_counts-pos.pattern_0.n_9651-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/Hughes_GR_models_ZNF770_counts-pos.pattern_10.n_177-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/Hughes_GR_models_ZNF770_counts-pos.pattern_11.n_157-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/Hughes_GR_models_ZNF770_counts-pos.pattern_12.n_154-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/Hughes_GR_models_ZNF770_counts-pos.pattern_13.n_133-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/Hughes_GR_models_ZNF770_counts-pos.pattern_14.n_116-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/Hughes_GR_models_ZNF770_counts-pos.pattern_15.n_116-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/Hughes_GR_models_ZNF770_counts-pos.pattern_16.n_112-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/Hughes_GR_models_ZNF770_counts-pos.pattern_17.n_90-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/Hughes_GR_models_ZNF770_counts-pos.pattern_18.n_86-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/Hughes_GR_models_ZNF770_counts-pos.pattern_19.n_76-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/Hughes_GR_models_ZNF770_counts-pos.pattern_1.n_9162-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/Hughes_GR_models_ZNF770_counts-pos.pattern_20.n_72-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/Hughes_GR_models_ZNF770_counts-pos.pattern_21.n_66-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/Hughes_GR_models_ZNF770_counts-pos.pattern_22.n_53-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/Hughes_GR_models_ZNF770_counts-pos.pattern_23.n_30-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/Hughes_GR_models_ZNF770_counts-pos.pattern_2.n_1918-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/Hughes_GR_models_ZNF770_counts-pos.pattern_3.n_1408-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/Hughes_GR_models_ZNF770_counts-pos.pattern_4.n_385-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/Hughes_GR_models_ZNF770_counts-pos.pattern_5.n_250-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/Hughes_GR_models_ZNF770_counts-pos.pattern_6.n_216-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/Hughes_GR_models_ZNF770_counts-pos.pattern_7.n_207-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/Hughes_GR_models_ZNF770_counts-pos.pattern_8.n_192-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/Hughes_GR_models_ZNF770_counts-pos.pattern_9.n_190-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR242BGR_ChIP_ZNF770_HEK293_ENCSR055REJ_counts_pattern_0.n_14707-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR242BGR_ChIP_ZNF770_HEK293_ENCSR055REJ_counts_pattern_10.n_128-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR242BGR_ChIP_ZNF770_HEK293_ENCSR055REJ_counts_pattern_11.n_87-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR242BGR_ChIP_ZNF770_HEK293_ENCSR055REJ_counts_pattern_12.n_54-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR242BGR_ChIP_ZNF770_HEK293_ENCSR055REJ_counts_pattern_13.n_52-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR242BGR_ChIP_ZNF770_HEK293_ENCSR055REJ_counts_pattern_14.n_44-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR242BGR_ChIP_ZNF770_HEK293_ENCSR055REJ_counts_pattern_15.n_42-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR242BGR_ChIP_ZNF770_HEK293_ENCSR055REJ_counts_pattern_16.n_29-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR242BGR_ChIP_ZNF770_HEK293_ENCSR055REJ_counts_pattern_17.n_23-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR242BGR_ChIP_ZNF770_HEK293_ENCSR055REJ_counts_pattern_18.n_23-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR242BGR_ChIP_ZNF770_HEK293_ENCSR055REJ_counts_pattern_1.n_6704-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR242BGR_ChIP_ZNF770_HEK293_ENCSR055REJ_counts_pattern_2.n_1796-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR242BGR_ChIP_ZNF770_HEK293_ENCSR055REJ_counts_pattern_3.n_1386-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR242BGR_ChIP_ZNF770_HEK293_ENCSR055REJ_counts_pattern_4.n_616-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR242BGR_ChIP_ZNF770_HEK293_ENCSR055REJ_counts_pattern_5.n_245-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR242BGR_ChIP_ZNF770_HEK293_ENCSR055REJ_counts_pattern_6.n_224-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR242BGR_ChIP_ZNF770_HEK293_ENCSR055REJ_counts_pattern_7.n_175-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR242BGR_ChIP_ZNF770_HEK293_ENCSR055REJ_counts_pattern_8.n_148-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR242BGR_ChIP_ZNF770_HEK293_ENCSR055REJ_counts_pattern_9.n_130-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR510GKB_ChIP_ZNF770_HepG2_ENCSR032AHU_counts_pattern_0.n_14871-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR510GKB_ChIP_ZNF770_HepG2_ENCSR032AHU_counts_pattern_10.n_92-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR510GKB_ChIP_ZNF770_HepG2_ENCSR032AHU_counts_pattern_11.n_76-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR510GKB_ChIP_ZNF770_HepG2_ENCSR032AHU_counts_pattern_12.n_75-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR510GKB_ChIP_ZNF770_HepG2_ENCSR032AHU_counts_pattern_13.n_32-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR510GKB_ChIP_ZNF770_HepG2_ENCSR032AHU_counts_pattern_14.n_31-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR510GKB_ChIP_ZNF770_HepG2_ENCSR032AHU_counts_pattern_15.n_31-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR510GKB_ChIP_ZNF770_HepG2_ENCSR032AHU_counts_pattern_16.n_29-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR510GKB_ChIP_ZNF770_HepG2_ENCSR032AHU_counts_pattern_17.n_26-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR510GKB_ChIP_ZNF770_HepG2_ENCSR032AHU_counts_pattern_1.n_5350-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR510GKB_ChIP_ZNF770_HepG2_ENCSR032AHU_counts_pattern_2.n_1889-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR510GKB_ChIP_ZNF770_HepG2_ENCSR032AHU_counts_pattern_3.n_352-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR510GKB_ChIP_ZNF770_HepG2_ENCSR032AHU_counts_pattern_4.n_306-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR510GKB_ChIP_ZNF770_HepG2_ENCSR032AHU_counts_pattern_5.n_251-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR510GKB_ChIP_ZNF770_HepG2_ENCSR032AHU_counts_pattern_6.n_219-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR510GKB_ChIP_ZNF770_HepG2_ENCSR032AHU_counts_pattern_7.n_138-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR510GKB_ChIP_ZNF770_HepG2_ENCSR032AHU_counts_pattern_8.n_115-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR510GKB_ChIP_ZNF770_HepG2_ENCSR032AHU_counts_pattern_9.n_103-vs-ZNF770-201.alignment counts-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF77-201/ChipExo_models_ZNF77_counts-pos.pattern_0.n_380-vs-ZNF77-201.alignment counts-znf_b1h_alignment/ZNF77-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF77-201/ChipExo_models_ZNF77_counts-pos.pattern_1.n_195-vs-ZNF77-201.alignment counts-znf_b1h_alignment/ZNF77-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF77-201/ChipExo_models_ZNF77_counts-pos.pattern_2.n_22-vs-ZNF77-201.alignment counts-znf_b1h_alignment/ZNF77-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF77-201/neg_patterns.ENCSR844MAB_ChIP_ZNF77_K562_ENCSR381SNK_counts_pattern_0.n_144-vs-ZNF77-201.alignment counts-znf_b1h_alignment/ZNF77-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF77-201/neg_patterns.ENCSR844MAB_ChIP_ZNF77_K562_ENCSR381SNK_counts_pattern_10.n_20-vs-ZNF77-201.alignment counts-znf_b1h_alignment/ZNF77-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF77-201/neg_patterns.ENCSR844MAB_ChIP_ZNF77_K562_ENCSR381SNK_counts_pattern_1.n_94-vs-ZNF77-201.alignment counts-znf_b1h_alignment/ZNF77-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF77-201/neg_patterns.ENCSR844MAB_ChIP_ZNF77_K562_ENCSR381SNK_counts_pattern_2.n_85-vs-ZNF77-201.alignment counts-znf_b1h_alignment/ZNF77-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF77-201/neg_patterns.ENCSR844MAB_ChIP_ZNF77_K562_ENCSR381SNK_counts_pattern_3.n_85-vs-ZNF77-201.alignment counts-znf_b1h_alignment/ZNF77-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF77-201/neg_patterns.ENCSR844MAB_ChIP_ZNF77_K562_ENCSR381SNK_counts_pattern_4.n_75-vs-ZNF77-201.alignment counts-znf_b1h_alignment/ZNF77-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF77-201/neg_patterns.ENCSR844MAB_ChIP_ZNF77_K562_ENCSR381SNK_counts_pattern_5.n_65-vs-ZNF77-201.alignment counts-znf_b1h_alignment/ZNF77-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF77-201/neg_patterns.ENCSR844MAB_ChIP_ZNF77_K562_ENCSR381SNK_counts_pattern_6.n_50-vs-ZNF77-201.alignment counts-znf_b1h_alignment/ZNF77-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF77-201/neg_patterns.ENCSR844MAB_ChIP_ZNF77_K562_ENCSR381SNK_counts_pattern_7.n_41-vs-ZNF77-201.alignment counts-znf_b1h_alignment/ZNF77-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF77-201/neg_patterns.ENCSR844MAB_ChIP_ZNF77_K562_ENCSR381SNK_counts_pattern_8.n_40-vs-ZNF77-201.alignment counts-znf_b1h_alignment/ZNF77-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF77-201/neg_patterns.ENCSR844MAB_ChIP_ZNF77_K562_ENCSR381SNK_counts_pattern_9.n_24-vs-ZNF77-201.alignment counts-znf_b1h_alignment/ZNF77-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF77-201/pos_patterns.ENCSR844MAB_ChIP_ZNF77_K562_ENCSR381SNK_counts_pattern_0.n_57-vs-ZNF77-201.alignment counts-znf_b1h_alignment/ZNF77-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF77-201/pos_patterns.ENCSR844MAB_ChIP_ZNF77_K562_ENCSR381SNK_counts_pattern_1.n_44-vs-ZNF77-201.alignment counts-znf_b1h_alignment/ZNF77-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF77-201/pos_patterns.ENCSR844MAB_ChIP_ZNF77_K562_ENCSR381SNK_counts_pattern_2.n_43-vs-ZNF77-201.alignment counts-znf_b1h_alignment/ZNF77-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF77-201/pos_patterns.ENCSR844MAB_ChIP_ZNF77_K562_ENCSR381SNK_counts_pattern_3.n_43-vs-ZNF77-201.alignment counts-znf_b1h_alignment/ZNF77-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF77-201/pos_patterns.ENCSR844MAB_ChIP_ZNF77_K562_ENCSR381SNK_counts_pattern_4.n_42-vs-ZNF77-201.alignment counts-znf_b1h_alignment/ZNF77-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF77-201/pos_patterns.ENCSR844MAB_ChIP_ZNF77_K562_ENCSR381SNK_counts_pattern_5.n_37-vs-ZNF77-201.alignment counts-znf_b1h_alignment/ZNF77-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF77-201/pos_patterns.ENCSR844MAB_ChIP_ZNF77_K562_ENCSR381SNK_counts_pattern_6.n_30-vs-ZNF77-201.alignment counts-znf_b1h_alignment/ZNF77-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF77-201/pos_patterns.ENCSR844MAB_ChIP_ZNF77_K562_ENCSR381SNK_counts_pattern_7.n_26-vs-ZNF77-201.alignment counts-znf_b1h_alignment/ZNF77-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF77-201/pos_patterns.ENCSR844MAB_ChIP_ZNF77_K562_ENCSR381SNK_counts_pattern_8.n_25-vs-ZNF77-201.alignment counts-znf_b1h_alignment/ZNF77-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF77-201/pos_patterns.ENCSR844MAB_ChIP_ZNF77_K562_ENCSR381SNK_counts_pattern_9.n_20-vs-ZNF77-201.alignment counts-znf_b1h_alignment/ZNF77-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF772-201/pos_patterns.ENCSR248WAU_ChIP_ZNF772_HepG2_ENCSR926XBA_counts_pattern_0.n_3604-vs-ZNF772-201.alignment counts-znf_b1h_alignment/ZNF772-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF772-201/pos_patterns.ENCSR248WAU_ChIP_ZNF772_HepG2_ENCSR926XBA_counts_pattern_10.n_402-vs-ZNF772-201.alignment counts-znf_b1h_alignment/ZNF772-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF772-201/pos_patterns.ENCSR248WAU_ChIP_ZNF772_HepG2_ENCSR926XBA_counts_pattern_11.n_395-vs-ZNF772-201.alignment counts-znf_b1h_alignment/ZNF772-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF772-201/pos_patterns.ENCSR248WAU_ChIP_ZNF772_HepG2_ENCSR926XBA_counts_pattern_12.n_335-vs-ZNF772-201.alignment counts-znf_b1h_alignment/ZNF772-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF772-201/pos_patterns.ENCSR248WAU_ChIP_ZNF772_HepG2_ENCSR926XBA_counts_pattern_13.n_316-vs-ZNF772-201.alignment counts-znf_b1h_alignment/ZNF772-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF772-201/pos_patterns.ENCSR248WAU_ChIP_ZNF772_HepG2_ENCSR926XBA_counts_pattern_14.n_232-vs-ZNF772-201.alignment counts-znf_b1h_alignment/ZNF772-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF772-201/pos_patterns.ENCSR248WAU_ChIP_ZNF772_HepG2_ENCSR926XBA_counts_pattern_15.n_196-vs-ZNF772-201.alignment counts-znf_b1h_alignment/ZNF772-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF772-201/pos_patterns.ENCSR248WAU_ChIP_ZNF772_HepG2_ENCSR926XBA_counts_pattern_16.n_118-vs-ZNF772-201.alignment counts-znf_b1h_alignment/ZNF772-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF772-201/pos_patterns.ENCSR248WAU_ChIP_ZNF772_HepG2_ENCSR926XBA_counts_pattern_17.n_116-vs-ZNF772-201.alignment counts-znf_b1h_alignment/ZNF772-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF772-201/pos_patterns.ENCSR248WAU_ChIP_ZNF772_HepG2_ENCSR926XBA_counts_pattern_18.n_28-vs-ZNF772-201.alignment counts-znf_b1h_alignment/ZNF772-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF772-201/pos_patterns.ENCSR248WAU_ChIP_ZNF772_HepG2_ENCSR926XBA_counts_pattern_1.n_3276-vs-ZNF772-201.alignment counts-znf_b1h_alignment/ZNF772-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF772-201/pos_patterns.ENCSR248WAU_ChIP_ZNF772_HepG2_ENCSR926XBA_counts_pattern_2.n_1208-vs-ZNF772-201.alignment counts-znf_b1h_alignment/ZNF772-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF772-201/pos_patterns.ENCSR248WAU_ChIP_ZNF772_HepG2_ENCSR926XBA_counts_pattern_3.n_1185-vs-ZNF772-201.alignment counts-znf_b1h_alignment/ZNF772-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF772-201/pos_patterns.ENCSR248WAU_ChIP_ZNF772_HepG2_ENCSR926XBA_counts_pattern_4.n_818-vs-ZNF772-201.alignment counts-znf_b1h_alignment/ZNF772-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF772-201/pos_patterns.ENCSR248WAU_ChIP_ZNF772_HepG2_ENCSR926XBA_counts_pattern_5.n_673-vs-ZNF772-201.alignment counts-znf_b1h_alignment/ZNF772-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF772-201/pos_patterns.ENCSR248WAU_ChIP_ZNF772_HepG2_ENCSR926XBA_counts_pattern_6.n_642-vs-ZNF772-201.alignment counts-znf_b1h_alignment/ZNF772-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF772-201/pos_patterns.ENCSR248WAU_ChIP_ZNF772_HepG2_ENCSR926XBA_counts_pattern_7.n_579-vs-ZNF772-201.alignment counts-znf_b1h_alignment/ZNF772-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF772-201/pos_patterns.ENCSR248WAU_ChIP_ZNF772_HepG2_ENCSR926XBA_counts_pattern_8.n_431-vs-ZNF772-201.alignment counts-znf_b1h_alignment/ZNF772-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF772-201/pos_patterns.ENCSR248WAU_ChIP_ZNF772_HepG2_ENCSR926XBA_counts_pattern_9.n_420-vs-ZNF772-201.alignment counts-znf_b1h_alignment/ZNF772-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF773-201/pos_patterns.ENCSR029ARE_ChIP_ZNF773_HepG2_ENCSR349ZFV_counts_pattern_0.n_2490-vs-ZNF773-201.alignment counts-znf_b1h_alignment/ZNF773-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF773-201/pos_patterns.ENCSR029ARE_ChIP_ZNF773_HepG2_ENCSR349ZFV_counts_pattern_1.n_1374-vs-ZNF773-201.alignment counts-znf_b1h_alignment/ZNF773-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF773-201/pos_patterns.ENCSR029ARE_ChIP_ZNF773_HepG2_ENCSR349ZFV_counts_pattern_2.n_1034-vs-ZNF773-201.alignment counts-znf_b1h_alignment/ZNF773-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF773-201/pos_patterns.ENCSR029ARE_ChIP_ZNF773_HepG2_ENCSR349ZFV_counts_pattern_3.n_314-vs-ZNF773-201.alignment counts-znf_b1h_alignment/ZNF773-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF773-201/pos_patterns.ENCSR029ARE_ChIP_ZNF773_HepG2_ENCSR349ZFV_counts_pattern_4.n_163-vs-ZNF773-201.alignment counts-znf_b1h_alignment/ZNF773-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF773-201/pos_patterns.ENCSR029ARE_ChIP_ZNF773_HepG2_ENCSR349ZFV_counts_pattern_5.n_110-vs-ZNF773-201.alignment counts-znf_b1h_alignment/ZNF773-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF773-201/pos_patterns.ENCSR029ARE_ChIP_ZNF773_HepG2_ENCSR349ZFV_counts_pattern_6.n_83-vs-ZNF773-201.alignment counts-znf_b1h_alignment/ZNF773-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF773-201/pos_patterns.ENCSR029ARE_ChIP_ZNF773_HepG2_ENCSR349ZFV_counts_pattern_7.n_80-vs-ZNF773-201.alignment counts-znf_b1h_alignment/ZNF773-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF773-201/pos_patterns.ENCSR029ARE_ChIP_ZNF773_HepG2_ENCSR349ZFV_counts_pattern_8.n_54-vs-ZNF773-201.alignment counts-znf_b1h_alignment/ZNF773-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF775-201/neg_patterns.ENCSR856QJP_ChIP_ZNF775_HepG2_ENCSR171FDR_counts_pattern_0.n_45-vs-ZNF775-201.alignment counts-znf_b1h_alignment/ZNF775-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF775-201/neg_patterns.ENCSR856QJP_ChIP_ZNF775_HepG2_ENCSR171FDR_counts_pattern_1.n_28-vs-ZNF775-201.alignment counts-znf_b1h_alignment/ZNF775-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF775-201/neg_patterns.ENCSR856QJP_ChIP_ZNF775_HepG2_ENCSR171FDR_counts_pattern_2.n_25-vs-ZNF775-201.alignment counts-znf_b1h_alignment/ZNF775-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF775-201/pos_patterns.ENCSR856QJP_ChIP_ZNF775_HepG2_ENCSR171FDR_counts_pattern_0.n_1224-vs-ZNF775-201.alignment counts-znf_b1h_alignment/ZNF775-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF775-201/pos_patterns.ENCSR856QJP_ChIP_ZNF775_HepG2_ENCSR171FDR_counts_pattern_1.n_1069-vs-ZNF775-201.alignment counts-znf_b1h_alignment/ZNF775-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF775-201/pos_patterns.ENCSR856QJP_ChIP_ZNF775_HepG2_ENCSR171FDR_counts_pattern_2.n_911-vs-ZNF775-201.alignment counts-znf_b1h_alignment/ZNF775-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF775-201/pos_patterns.ENCSR856QJP_ChIP_ZNF775_HepG2_ENCSR171FDR_counts_pattern_3.n_545-vs-ZNF775-201.alignment counts-znf_b1h_alignment/ZNF775-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF775-201/pos_patterns.ENCSR856QJP_ChIP_ZNF775_HepG2_ENCSR171FDR_counts_pattern_4.n_168-vs-ZNF775-201.alignment counts-znf_b1h_alignment/ZNF775-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF775-201/pos_patterns.ENCSR856QJP_ChIP_ZNF775_HepG2_ENCSR171FDR_counts_pattern_5.n_142-vs-ZNF775-201.alignment counts-znf_b1h_alignment/ZNF775-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF775-201/pos_patterns.ENCSR856QJP_ChIP_ZNF775_HepG2_ENCSR171FDR_counts_pattern_6.n_89-vs-ZNF775-201.alignment counts-znf_b1h_alignment/ZNF775-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF775-201/pos_patterns.ENCSR856QJP_ChIP_ZNF775_HepG2_ENCSR171FDR_counts_pattern_7.n_56-vs-ZNF775-201.alignment counts-znf_b1h_alignment/ZNF775-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF775-201/pos_patterns.ENCSR856QJP_ChIP_ZNF775_HepG2_ENCSR171FDR_counts_pattern_8.n_28-vs-ZNF775-201.alignment counts-znf_b1h_alignment/ZNF775-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF775-201/pos_patterns.ENCSR856QJP_ChIP_ZNF775_HepG2_ENCSR171FDR_counts_pattern_9.n_25-vs-ZNF775-201.alignment counts-znf_b1h_alignment/ZNF775-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF776-201/ChipExo_models_ZNF776_counts-pos.pattern_0.n_409-vs-ZNF776-201.alignment counts-znf_b1h_alignment/ZNF776-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF776-201/ChipExo_models_ZNF776_counts-pos.pattern_1.n_202-vs-ZNF776-201.alignment counts-znf_b1h_alignment/ZNF776-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF776-201/ChipExo_models_ZNF776_counts-pos.pattern_2.n_139-vs-ZNF776-201.alignment counts-znf_b1h_alignment/ZNF776-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF776-201/ChipExo_models_ZNF776_counts-pos.pattern_3.n_89-vs-ZNF776-201.alignment counts-znf_b1h_alignment/ZNF776-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF776-201/ChipExo_models_ZNF776_counts-pos.pattern_4.n_29-vs-ZNF776-201.alignment counts-znf_b1h_alignment/ZNF776-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF776-201/ChipExo_models_ZNF776_counts-pos.pattern_5.n_28-vs-ZNF776-201.alignment counts-znf_b1h_alignment/ZNF776-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF776-201/ChipExo_models_ZNF776_counts-pos.pattern_6.n_26-vs-ZNF776-201.alignment counts-znf_b1h_alignment/ZNF776-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF776-201/ChipExo_models_ZNF776_counts-pos.pattern_7.n_25-vs-ZNF776-201.alignment counts-znf_b1h_alignment/ZNF776-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF776-201/ChipExo_models_ZNF776_counts-pos.pattern_8.n_20-vs-ZNF776-201.alignment counts-znf_b1h_alignment/ZNF776-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF776-201/pos_patterns.ENCSR274LVQ_ChIP_ZNF776_HEK293_ENCSR678WHB_counts_pattern_0.n_381-vs-ZNF776-201.alignment counts-znf_b1h_alignment/ZNF776-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF776-201/pos_patterns.ENCSR274LVQ_ChIP_ZNF776_HEK293_ENCSR678WHB_counts_pattern_1.n_240-vs-ZNF776-201.alignment counts-znf_b1h_alignment/ZNF776-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF776-201/pos_patterns.ENCSR274LVQ_ChIP_ZNF776_HEK293_ENCSR678WHB_counts_pattern_2.n_92-vs-ZNF776-201.alignment counts-znf_b1h_alignment/ZNF776-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF776-201/pos_patterns.ENCSR274LVQ_ChIP_ZNF776_HEK293_ENCSR678WHB_counts_pattern_3.n_37-vs-ZNF776-201.alignment counts-znf_b1h_alignment/ZNF776-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF776-201/pos_patterns.ENCSR274LVQ_ChIP_ZNF776_HEK293_ENCSR678WHB_counts_pattern_4.n_21-vs-ZNF776-201.alignment counts-znf_b1h_alignment/ZNF776-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF776-201/pos_patterns.ENCSR704ENT_ChIP_ZNF776_HepG2_ENCSR113NLK_counts_pattern_0.n_3115-vs-ZNF776-201.alignment counts-znf_b1h_alignment/ZNF776-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF776-201/pos_patterns.ENCSR704ENT_ChIP_ZNF776_HepG2_ENCSR113NLK_counts_pattern_1.n_2729-vs-ZNF776-201.alignment counts-znf_b1h_alignment/ZNF776-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF776-201/pos_patterns.ENCSR704ENT_ChIP_ZNF776_HepG2_ENCSR113NLK_counts_pattern_2.n_2437-vs-ZNF776-201.alignment counts-znf_b1h_alignment/ZNF776-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF776-201/pos_patterns.ENCSR704ENT_ChIP_ZNF776_HepG2_ENCSR113NLK_counts_pattern_3.n_2392-vs-ZNF776-201.alignment counts-znf_b1h_alignment/ZNF776-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF776-201/pos_patterns.ENCSR704ENT_ChIP_ZNF776_HepG2_ENCSR113NLK_counts_pattern_4.n_1202-vs-ZNF776-201.alignment counts-znf_b1h_alignment/ZNF776-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF777-201/ChipExo_models_ZNF777_counts-pos.pattern_0.n_567-vs-ZNF777-201.alignment counts-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF777-201/ChipExo_models_ZNF777_counts-pos.pattern_10.n_24-vs-ZNF777-201.alignment counts-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF777-201/ChipExo_models_ZNF777_counts-pos.pattern_1.n_485-vs-ZNF777-201.alignment counts-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF777-201/ChipExo_models_ZNF777_counts-pos.pattern_2.n_142-vs-ZNF777-201.alignment counts-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF777-201/ChipExo_models_ZNF777_counts-pos.pattern_3.n_95-vs-ZNF777-201.alignment counts-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF777-201/ChipExo_models_ZNF777_counts-pos.pattern_4.n_85-vs-ZNF777-201.alignment counts-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF777-201/ChipExo_models_ZNF777_counts-pos.pattern_5.n_80-vs-ZNF777-201.alignment counts-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF777-201/ChipExo_models_ZNF777_counts-pos.pattern_6.n_57-vs-ZNF777-201.alignment counts-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF777-201/ChipExo_models_ZNF777_counts-pos.pattern_7.n_50-vs-ZNF777-201.alignment counts-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF777-201/ChipExo_models_ZNF777_counts-pos.pattern_8.n_42-vs-ZNF777-201.alignment counts-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF777-201/ChipExo_models_ZNF777_counts-pos.pattern_9.n_31-vs-ZNF777-201.alignment counts-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR068ZQR_ChIP_ZNF777_HepG2_ENCSR759UUU_counts_pattern_0.n_9557-vs-ZNF777-201.alignment counts-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR068ZQR_ChIP_ZNF777_HepG2_ENCSR759UUU_counts_pattern_1.n_517-vs-ZNF777-201.alignment counts-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR068ZQR_ChIP_ZNF777_HepG2_ENCSR759UUU_counts_pattern_2.n_378-vs-ZNF777-201.alignment counts-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR068ZQR_ChIP_ZNF777_HepG2_ENCSR759UUU_counts_pattern_3.n_220-vs-ZNF777-201.alignment counts-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR068ZQR_ChIP_ZNF777_HepG2_ENCSR759UUU_counts_pattern_4.n_89-vs-ZNF777-201.alignment counts-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR295BIP_ChIP_ZNF777_HEK293_ENCSR166JMV_counts_pattern_0.n_1410-vs-ZNF777-201.alignment counts-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR295BIP_ChIP_ZNF777_HEK293_ENCSR166JMV_counts_pattern_10.n_156-vs-ZNF777-201.alignment counts-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR295BIP_ChIP_ZNF777_HEK293_ENCSR166JMV_counts_pattern_11.n_155-vs-ZNF777-201.alignment counts-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR295BIP_ChIP_ZNF777_HEK293_ENCSR166JMV_counts_pattern_12.n_150-vs-ZNF777-201.alignment counts-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR295BIP_ChIP_ZNF777_HEK293_ENCSR166JMV_counts_pattern_13.n_143-vs-ZNF777-201.alignment counts-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR295BIP_ChIP_ZNF777_HEK293_ENCSR166JMV_counts_pattern_14.n_134-vs-ZNF777-201.alignment counts-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR295BIP_ChIP_ZNF777_HEK293_ENCSR166JMV_counts_pattern_15.n_121-vs-ZNF777-201.alignment counts-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR295BIP_ChIP_ZNF777_HEK293_ENCSR166JMV_counts_pattern_16.n_115-vs-ZNF777-201.alignment counts-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR295BIP_ChIP_ZNF777_HEK293_ENCSR166JMV_counts_pattern_17.n_113-vs-ZNF777-201.alignment counts-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR295BIP_ChIP_ZNF777_HEK293_ENCSR166JMV_counts_pattern_18.n_89-vs-ZNF777-201.alignment counts-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR295BIP_ChIP_ZNF777_HEK293_ENCSR166JMV_counts_pattern_19.n_82-vs-ZNF777-201.alignment counts-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR295BIP_ChIP_ZNF777_HEK293_ENCSR166JMV_counts_pattern_1.n_449-vs-ZNF777-201.alignment counts-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR295BIP_ChIP_ZNF777_HEK293_ENCSR166JMV_counts_pattern_20.n_68-vs-ZNF777-201.alignment counts-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR295BIP_ChIP_ZNF777_HEK293_ENCSR166JMV_counts_pattern_21.n_59-vs-ZNF777-201.alignment counts-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR295BIP_ChIP_ZNF777_HEK293_ENCSR166JMV_counts_pattern_22.n_57-vs-ZNF777-201.alignment counts-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR295BIP_ChIP_ZNF777_HEK293_ENCSR166JMV_counts_pattern_2.n_442-vs-ZNF777-201.alignment counts-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR295BIP_ChIP_ZNF777_HEK293_ENCSR166JMV_counts_pattern_3.n_332-vs-ZNF777-201.alignment counts-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR295BIP_ChIP_ZNF777_HEK293_ENCSR166JMV_counts_pattern_4.n_251-vs-ZNF777-201.alignment counts-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR295BIP_ChIP_ZNF777_HEK293_ENCSR166JMV_counts_pattern_5.n_212-vs-ZNF777-201.alignment counts-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR295BIP_ChIP_ZNF777_HEK293_ENCSR166JMV_counts_pattern_6.n_194-vs-ZNF777-201.alignment counts-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR295BIP_ChIP_ZNF777_HEK293_ENCSR166JMV_counts_pattern_7.n_186-vs-ZNF777-201.alignment counts-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR295BIP_ChIP_ZNF777_HEK293_ENCSR166JMV_counts_pattern_8.n_167-vs-ZNF777-201.alignment counts-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR295BIP_ChIP_ZNF777_HEK293_ENCSR166JMV_counts_pattern_9.n_166-vs-ZNF777-201.alignment counts-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF778-207/ChipExo_models_ZNF778_counts-pos.pattern_0.n_1879-vs-ZNF778-207.alignment counts-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF778-207/ChipExo_models_ZNF778_counts-pos.pattern_1.n_1033-vs-ZNF778-207.alignment counts-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF778-207/Hughes_GR_models_ZNF778_counts-pos.pattern_0.n_1417-vs-ZNF778-207.alignment counts-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF778-207/Hughes_GR_models_ZNF778_counts-pos.pattern_1.n_156-vs-ZNF778-207.alignment counts-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF778-207/Hughes_GR_models_ZNF778_counts-pos.pattern_2.n_93-vs-ZNF778-207.alignment counts-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF778-207/neg_patterns.ENCSR110JLQ_ChIP_ZNF778_K562_ENCSR938VFM_counts_pattern_0.n_33-vs-ZNF778-207.alignment counts-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF778-207/neg_patterns.ENCSR110JLQ_ChIP_ZNF778_K562_ENCSR938VFM_counts_pattern_1.n_24-vs-ZNF778-207.alignment counts-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF778-207/neg_patterns.ENCSR110JLQ_ChIP_ZNF778_K562_ENCSR938VFM_counts_pattern_2.n_24-vs-ZNF778-207.alignment counts-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF778-207/neg_patterns.ENCSR110JLQ_ChIP_ZNF778_K562_ENCSR938VFM_counts_pattern_3.n_20-vs-ZNF778-207.alignment counts-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF778-207/pos_patterns.ENCSR110JLQ_ChIP_ZNF778_K562_ENCSR938VFM_counts_pattern_0.n_77-vs-ZNF778-207.alignment counts-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF778-207/pos_patterns.ENCSR110JLQ_ChIP_ZNF778_K562_ENCSR938VFM_counts_pattern_1.n_24-vs-ZNF778-207.alignment counts-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF778-207/pos_patterns.ENCSR110JLQ_ChIP_ZNF778_K562_ENCSR938VFM_counts_pattern_2.n_21-vs-ZNF778-207.alignment counts-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF778-207/pos_patterns.ENCSR110JLQ_ChIP_ZNF778_K562_ENCSR938VFM_counts_pattern_3.n_20-vs-ZNF778-207.alignment counts-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF778-207/pos_patterns.ENCSR110JLQ_ChIP_ZNF778_K562_ENCSR938VFM_counts_pattern_4.n_20-vs-ZNF778-207.alignment counts-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF778-207/pos_patterns.ENCSR110JLQ_ChIP_ZNF778_K562_ENCSR938VFM_counts_pattern_5.n_20-vs-ZNF778-207.alignment counts-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF778-207/pos_patterns.ENCSR141ELR_ChIP_ZNF778_HepG2_ENCSR717GXO_counts_pattern_0.n_1024-vs-ZNF778-207.alignment counts-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF778-207/pos_patterns.ENCSR141ELR_ChIP_ZNF778_HepG2_ENCSR717GXO_counts_pattern_10.n_47-vs-ZNF778-207.alignment counts-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF778-207/pos_patterns.ENCSR141ELR_ChIP_ZNF778_HepG2_ENCSR717GXO_counts_pattern_11.n_37-vs-ZNF778-207.alignment counts-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF778-207/pos_patterns.ENCSR141ELR_ChIP_ZNF778_HepG2_ENCSR717GXO_counts_pattern_12.n_28-vs-ZNF778-207.alignment counts-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF778-207/pos_patterns.ENCSR141ELR_ChIP_ZNF778_HepG2_ENCSR717GXO_counts_pattern_1.n_822-vs-ZNF778-207.alignment counts-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF778-207/pos_patterns.ENCSR141ELR_ChIP_ZNF778_HepG2_ENCSR717GXO_counts_pattern_2.n_494-vs-ZNF778-207.alignment counts-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF778-207/pos_patterns.ENCSR141ELR_ChIP_ZNF778_HepG2_ENCSR717GXO_counts_pattern_3.n_492-vs-ZNF778-207.alignment counts-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF778-207/pos_patterns.ENCSR141ELR_ChIP_ZNF778_HepG2_ENCSR717GXO_counts_pattern_4.n_329-vs-ZNF778-207.alignment counts-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF778-207/pos_patterns.ENCSR141ELR_ChIP_ZNF778_HepG2_ENCSR717GXO_counts_pattern_5.n_133-vs-ZNF778-207.alignment counts-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF778-207/pos_patterns.ENCSR141ELR_ChIP_ZNF778_HepG2_ENCSR717GXO_counts_pattern_6.n_104-vs-ZNF778-207.alignment counts-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF778-207/pos_patterns.ENCSR141ELR_ChIP_ZNF778_HepG2_ENCSR717GXO_counts_pattern_7.n_94-vs-ZNF778-207.alignment counts-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF778-207/pos_patterns.ENCSR141ELR_ChIP_ZNF778_HepG2_ENCSR717GXO_counts_pattern_8.n_79-vs-ZNF778-207.alignment counts-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF778-207/pos_patterns.ENCSR141ELR_ChIP_ZNF778_HepG2_ENCSR717GXO_counts_pattern_9.n_73-vs-ZNF778-207.alignment counts-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF780A-201/ChipExo_models_ZNF780A_counts-pos.pattern_0.n_1582-vs-ZNF780A-201.alignment counts-znf_b1h_alignment/ZNF780A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF780A-201/ChipExo_models_ZNF780A_counts-pos.pattern_1.n_484-vs-ZNF780A-201.alignment counts-znf_b1h_alignment/ZNF780A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF780A-201/ChipExo_models_ZNF780A_counts-pos.pattern_2.n_330-vs-ZNF780A-201.alignment counts-znf_b1h_alignment/ZNF780A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF780A-201/ChipExo_models_ZNF780A_counts-pos.pattern_3.n_26-vs-ZNF780A-201.alignment counts-znf_b1h_alignment/ZNF780A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF780A-201/neg_patterns.ENCSR095JQV_ChIP_ZNF780A_HepG2_ENCSR163MRB_counts_pattern_0.n_51-vs-ZNF780A-201.alignment counts-znf_b1h_alignment/ZNF780A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF780A-201/neg_patterns.ENCSR214PDW_ChIP_ZNF780A_K562_ENCSR260QGM_counts_pattern_0.n_42-vs-ZNF780A-201.alignment counts-znf_b1h_alignment/ZNF780A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF780A-201/neg_patterns.ENCSR214PDW_ChIP_ZNF780A_K562_ENCSR260QGM_counts_pattern_1.n_40-vs-ZNF780A-201.alignment counts-znf_b1h_alignment/ZNF780A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF780A-201/neg_patterns.ENCSR214PDW_ChIP_ZNF780A_K562_ENCSR260QGM_counts_pattern_2.n_30-vs-ZNF780A-201.alignment counts-znf_b1h_alignment/ZNF780A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF780A-201/neg_patterns.ENCSR214PDW_ChIP_ZNF780A_K562_ENCSR260QGM_counts_pattern_3.n_28-vs-ZNF780A-201.alignment counts-znf_b1h_alignment/ZNF780A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF780A-201/pos_patterns.ENCSR095JQV_ChIP_ZNF780A_HepG2_ENCSR163MRB_counts_pattern_0.n_656-vs-ZNF780A-201.alignment counts-znf_b1h_alignment/ZNF780A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF780A-201/pos_patterns.ENCSR095JQV_ChIP_ZNF780A_HepG2_ENCSR163MRB_counts_pattern_10.n_129-vs-ZNF780A-201.alignment counts-znf_b1h_alignment/ZNF780A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF780A-201/pos_patterns.ENCSR095JQV_ChIP_ZNF780A_HepG2_ENCSR163MRB_counts_pattern_11.n_123-vs-ZNF780A-201.alignment counts-znf_b1h_alignment/ZNF780A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF780A-201/pos_patterns.ENCSR095JQV_ChIP_ZNF780A_HepG2_ENCSR163MRB_counts_pattern_12.n_112-vs-ZNF780A-201.alignment counts-znf_b1h_alignment/ZNF780A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF780A-201/pos_patterns.ENCSR095JQV_ChIP_ZNF780A_HepG2_ENCSR163MRB_counts_pattern_13.n_111-vs-ZNF780A-201.alignment counts-znf_b1h_alignment/ZNF780A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF780A-201/pos_patterns.ENCSR095JQV_ChIP_ZNF780A_HepG2_ENCSR163MRB_counts_pattern_14.n_103-vs-ZNF780A-201.alignment counts-znf_b1h_alignment/ZNF780A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF780A-201/pos_patterns.ENCSR095JQV_ChIP_ZNF780A_HepG2_ENCSR163MRB_counts_pattern_15.n_97-vs-ZNF780A-201.alignment counts-znf_b1h_alignment/ZNF780A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF780A-201/pos_patterns.ENCSR095JQV_ChIP_ZNF780A_HepG2_ENCSR163MRB_counts_pattern_16.n_84-vs-ZNF780A-201.alignment counts-znf_b1h_alignment/ZNF780A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF780A-201/pos_patterns.ENCSR095JQV_ChIP_ZNF780A_HepG2_ENCSR163MRB_counts_pattern_17.n_78-vs-ZNF780A-201.alignment counts-znf_b1h_alignment/ZNF780A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF780A-201/pos_patterns.ENCSR095JQV_ChIP_ZNF780A_HepG2_ENCSR163MRB_counts_pattern_18.n_71-vs-ZNF780A-201.alignment counts-znf_b1h_alignment/ZNF780A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF780A-201/pos_patterns.ENCSR095JQV_ChIP_ZNF780A_HepG2_ENCSR163MRB_counts_pattern_19.n_70-vs-ZNF780A-201.alignment counts-znf_b1h_alignment/ZNF780A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF780A-201/pos_patterns.ENCSR095JQV_ChIP_ZNF780A_HepG2_ENCSR163MRB_counts_pattern_1.n_254-vs-ZNF780A-201.alignment counts-znf_b1h_alignment/ZNF780A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF780A-201/pos_patterns.ENCSR095JQV_ChIP_ZNF780A_HepG2_ENCSR163MRB_counts_pattern_20.n_58-vs-ZNF780A-201.alignment counts-znf_b1h_alignment/ZNF780A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF780A-201/pos_patterns.ENCSR095JQV_ChIP_ZNF780A_HepG2_ENCSR163MRB_counts_pattern_21.n_44-vs-ZNF780A-201.alignment counts-znf_b1h_alignment/ZNF780A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF780A-201/pos_patterns.ENCSR095JQV_ChIP_ZNF780A_HepG2_ENCSR163MRB_counts_pattern_22.n_27-vs-ZNF780A-201.alignment counts-znf_b1h_alignment/ZNF780A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF780A-201/pos_patterns.ENCSR095JQV_ChIP_ZNF780A_HepG2_ENCSR163MRB_counts_pattern_2.n_243-vs-ZNF780A-201.alignment counts-znf_b1h_alignment/ZNF780A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF780A-201/pos_patterns.ENCSR095JQV_ChIP_ZNF780A_HepG2_ENCSR163MRB_counts_pattern_3.n_242-vs-ZNF780A-201.alignment counts-znf_b1h_alignment/ZNF780A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF780A-201/pos_patterns.ENCSR095JQV_ChIP_ZNF780A_HepG2_ENCSR163MRB_counts_pattern_4.n_193-vs-ZNF780A-201.alignment counts-znf_b1h_alignment/ZNF780A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF780A-201/pos_patterns.ENCSR095JQV_ChIP_ZNF780A_HepG2_ENCSR163MRB_counts_pattern_5.n_186-vs-ZNF780A-201.alignment counts-znf_b1h_alignment/ZNF780A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF780A-201/pos_patterns.ENCSR095JQV_ChIP_ZNF780A_HepG2_ENCSR163MRB_counts_pattern_6.n_150-vs-ZNF780A-201.alignment counts-znf_b1h_alignment/ZNF780A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF780A-201/pos_patterns.ENCSR095JQV_ChIP_ZNF780A_HepG2_ENCSR163MRB_counts_pattern_7.n_142-vs-ZNF780A-201.alignment counts-znf_b1h_alignment/ZNF780A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF780A-201/pos_patterns.ENCSR095JQV_ChIP_ZNF780A_HepG2_ENCSR163MRB_counts_pattern_8.n_133-vs-ZNF780A-201.alignment counts-znf_b1h_alignment/ZNF780A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF780A-201/pos_patterns.ENCSR095JQV_ChIP_ZNF780A_HepG2_ENCSR163MRB_counts_pattern_9.n_131-vs-ZNF780A-201.alignment counts-znf_b1h_alignment/ZNF780A-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF780A-201/pos_patterns.ENCSR214PDW_ChIP_ZNF780A_K562_ENCSR260QGM_counts_pattern_2.n_52-vs-ZNF780A-201.alignment counts-znf_b1h_alignment/ZNF780A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF780A-201/pos_patterns.ENCSR214PDW_ChIP_ZNF780A_K562_ENCSR260QGM_counts_pattern_3.n_50-vs-ZNF780A-201.alignment counts-znf_b1h_alignment/ZNF780A-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF781-201/neg_patterns.ENCSR517HGZ_ChIP_ZNF781_HepG2_ENCSR934MDH_counts_pattern_0.n_33-vs-ZNF781-201.alignment counts-znf_b1h_alignment/ZNF781-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF781-201/neg_patterns.ENCSR517HGZ_ChIP_ZNF781_HepG2_ENCSR934MDH_counts_pattern_2.n_20-vs-ZNF781-201.alignment counts-znf_b1h_alignment/ZNF781-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF781-201/pos_patterns.ENCSR517HGZ_ChIP_ZNF781_HepG2_ENCSR934MDH_counts_pattern_14.n_204-vs-ZNF781-201.alignment counts-znf_b1h_alignment/ZNF781-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF781-201/pos_patterns.ENCSR517HGZ_ChIP_ZNF781_HepG2_ENCSR934MDH_counts_pattern_15.n_187-vs-ZNF781-201.alignment counts-znf_b1h_alignment/ZNF781-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF781-201/pos_patterns.ENCSR517HGZ_ChIP_ZNF781_HepG2_ENCSR934MDH_counts_pattern_16.n_174-vs-ZNF781-201.alignment counts-znf_b1h_alignment/ZNF781-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF781-201/pos_patterns.ENCSR517HGZ_ChIP_ZNF781_HepG2_ENCSR934MDH_counts_pattern_17.n_145-vs-ZNF781-201.alignment counts-znf_b1h_alignment/ZNF781-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF781-201/pos_patterns.ENCSR517HGZ_ChIP_ZNF781_HepG2_ENCSR934MDH_counts_pattern_18.n_124-vs-ZNF781-201.alignment counts-znf_b1h_alignment/ZNF781-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF781-201/pos_patterns.ENCSR517HGZ_ChIP_ZNF781_HepG2_ENCSR934MDH_counts_pattern_19.n_105-vs-ZNF781-201.alignment counts-znf_b1h_alignment/ZNF781-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF781-201/pos_patterns.ENCSR517HGZ_ChIP_ZNF781_HepG2_ENCSR934MDH_counts_pattern_1.n_1788-vs-ZNF781-201.alignment counts-znf_b1h_alignment/ZNF781-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF781-201/pos_patterns.ENCSR517HGZ_ChIP_ZNF781_HepG2_ENCSR934MDH_counts_pattern_20.n_96-vs-ZNF781-201.alignment counts-znf_b1h_alignment/ZNF781-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF781-201/pos_patterns.ENCSR517HGZ_ChIP_ZNF781_HepG2_ENCSR934MDH_counts_pattern_21.n_30-vs-ZNF781-201.alignment counts-znf_b1h_alignment/ZNF781-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF781-201/pos_patterns.ENCSR517HGZ_ChIP_ZNF781_HepG2_ENCSR934MDH_counts_pattern_22.n_25-vs-ZNF781-201.alignment counts-znf_b1h_alignment/ZNF781-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF781-201/pos_patterns.ENCSR517HGZ_ChIP_ZNF781_HepG2_ENCSR934MDH_counts_pattern_2.n_1039-vs-ZNF781-201.alignment counts-znf_b1h_alignment/ZNF781-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF781-201/pos_patterns.ENCSR517HGZ_ChIP_ZNF781_HepG2_ENCSR934MDH_counts_pattern_3.n_977-vs-ZNF781-201.alignment counts-znf_b1h_alignment/ZNF781-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF781-201/pos_patterns.ENCSR517HGZ_ChIP_ZNF781_HepG2_ENCSR934MDH_counts_pattern_4.n_847-vs-ZNF781-201.alignment counts-znf_b1h_alignment/ZNF781-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF781-201/pos_patterns.ENCSR517HGZ_ChIP_ZNF781_HepG2_ENCSR934MDH_counts_pattern_5.n_528-vs-ZNF781-201.alignment counts-znf_b1h_alignment/ZNF781-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF781-201/pos_patterns.ENCSR517HGZ_ChIP_ZNF781_HepG2_ENCSR934MDH_counts_pattern_6.n_301-vs-ZNF781-201.alignment counts-znf_b1h_alignment/ZNF781-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF781-201/pos_patterns.ENCSR517HGZ_ChIP_ZNF781_HepG2_ENCSR934MDH_counts_pattern_7.n_294-vs-ZNF781-201.alignment counts-znf_b1h_alignment/ZNF781-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF781-201/pos_patterns.ENCSR517HGZ_ChIP_ZNF781_HepG2_ENCSR934MDH_counts_pattern_8.n_265-vs-ZNF781-201.alignment counts-znf_b1h_alignment/ZNF781-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF781-201/pos_patterns.ENCSR517HGZ_ChIP_ZNF781_HepG2_ENCSR934MDH_counts_pattern_9.n_264-vs-ZNF781-201.alignment counts-znf_b1h_alignment/ZNF781-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF782-208/ChipExo_models_ZNF782_counts-pos.pattern_0.n_138-vs-ZNF782-208.alignment counts-znf_b1h_alignment/ZNF782-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF782-208/ChipExo_models_ZNF782_counts-pos.pattern_1.n_23-vs-ZNF782-208.alignment counts-znf_b1h_alignment/ZNF782-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF782-208/neg_patterns.ENCSR198RHC_ChIP_ZNF782_HepG2_ENCSR765AFR_counts_pattern_0.n_91-vs-ZNF782-208.alignment counts-znf_b1h_alignment/ZNF782-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF782-208/neg_patterns.ENCSR198RHC_ChIP_ZNF782_HepG2_ENCSR765AFR_counts_pattern_1.n_69-vs-ZNF782-208.alignment counts-znf_b1h_alignment/ZNF782-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF782-208/neg_patterns.ENCSR198RHC_ChIP_ZNF782_HepG2_ENCSR765AFR_counts_pattern_2.n_35-vs-ZNF782-208.alignment counts-znf_b1h_alignment/ZNF782-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF782-208/neg_patterns.ENCSR198RHC_ChIP_ZNF782_HepG2_ENCSR765AFR_counts_pattern_3.n_30-vs-ZNF782-208.alignment counts-znf_b1h_alignment/ZNF782-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF782-208/pos_patterns.ENCSR198RHC_ChIP_ZNF782_HepG2_ENCSR765AFR_counts_pattern_0.n_2220-vs-ZNF782-208.alignment counts-znf_b1h_alignment/ZNF782-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF782-208/pos_patterns.ENCSR198RHC_ChIP_ZNF782_HepG2_ENCSR765AFR_counts_pattern_10.n_177-vs-ZNF782-208.alignment counts-znf_b1h_alignment/ZNF782-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF782-208/pos_patterns.ENCSR198RHC_ChIP_ZNF782_HepG2_ENCSR765AFR_counts_pattern_11.n_164-vs-ZNF782-208.alignment counts-znf_b1h_alignment/ZNF782-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF782-208/pos_patterns.ENCSR198RHC_ChIP_ZNF782_HepG2_ENCSR765AFR_counts_pattern_12.n_161-vs-ZNF782-208.alignment counts-znf_b1h_alignment/ZNF782-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF782-208/pos_patterns.ENCSR198RHC_ChIP_ZNF782_HepG2_ENCSR765AFR_counts_pattern_13.n_143-vs-ZNF782-208.alignment counts-znf_b1h_alignment/ZNF782-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF782-208/pos_patterns.ENCSR198RHC_ChIP_ZNF782_HepG2_ENCSR765AFR_counts_pattern_14.n_117-vs-ZNF782-208.alignment counts-znf_b1h_alignment/ZNF782-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF782-208/pos_patterns.ENCSR198RHC_ChIP_ZNF782_HepG2_ENCSR765AFR_counts_pattern_15.n_107-vs-ZNF782-208.alignment counts-znf_b1h_alignment/ZNF782-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF782-208/pos_patterns.ENCSR198RHC_ChIP_ZNF782_HepG2_ENCSR765AFR_counts_pattern_16.n_69-vs-ZNF782-208.alignment counts-znf_b1h_alignment/ZNF782-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF782-208/pos_patterns.ENCSR198RHC_ChIP_ZNF782_HepG2_ENCSR765AFR_counts_pattern_17.n_67-vs-ZNF782-208.alignment counts-znf_b1h_alignment/ZNF782-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF782-208/pos_patterns.ENCSR198RHC_ChIP_ZNF782_HepG2_ENCSR765AFR_counts_pattern_18.n_28-vs-ZNF782-208.alignment counts-znf_b1h_alignment/ZNF782-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF782-208/pos_patterns.ENCSR198RHC_ChIP_ZNF782_HepG2_ENCSR765AFR_counts_pattern_1.n_1677-vs-ZNF782-208.alignment counts-znf_b1h_alignment/ZNF782-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF782-208/pos_patterns.ENCSR198RHC_ChIP_ZNF782_HepG2_ENCSR765AFR_counts_pattern_2.n_1627-vs-ZNF782-208.alignment counts-znf_b1h_alignment/ZNF782-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF782-208/pos_patterns.ENCSR198RHC_ChIP_ZNF782_HepG2_ENCSR765AFR_counts_pattern_3.n_1480-vs-ZNF782-208.alignment counts-znf_b1h_alignment/ZNF782-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF782-208/pos_patterns.ENCSR198RHC_ChIP_ZNF782_HepG2_ENCSR765AFR_counts_pattern_4.n_1154-vs-ZNF782-208.alignment counts-znf_b1h_alignment/ZNF782-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF782-208/pos_patterns.ENCSR198RHC_ChIP_ZNF782_HepG2_ENCSR765AFR_counts_pattern_5.n_367-vs-ZNF782-208.alignment counts-znf_b1h_alignment/ZNF782-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF782-208/pos_patterns.ENCSR198RHC_ChIP_ZNF782_HepG2_ENCSR765AFR_counts_pattern_6.n_323-vs-ZNF782-208.alignment counts-znf_b1h_alignment/ZNF782-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF782-208/pos_patterns.ENCSR198RHC_ChIP_ZNF782_HepG2_ENCSR765AFR_counts_pattern_7.n_314-vs-ZNF782-208.alignment counts-znf_b1h_alignment/ZNF782-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF782-208/pos_patterns.ENCSR198RHC_ChIP_ZNF782_HepG2_ENCSR765AFR_counts_pattern_8.n_309-vs-ZNF782-208.alignment counts-znf_b1h_alignment/ZNF782-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF782-208/pos_patterns.ENCSR198RHC_ChIP_ZNF782_HepG2_ENCSR765AFR_counts_pattern_9.n_244-vs-ZNF782-208.alignment counts-znf_b1h_alignment/ZNF782-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF783-202/ChipExo_models_ZNF783_counts-pos.pattern_0.n_2877-vs-ZNF783-202.alignment counts-znf_b1h_alignment/ZNF783-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-201/Hughes_GR_models_ZNF784_counts-pos.pattern_0.n_37-vs-ZNF784-201.alignment counts-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-201/Hughes_GR_models_ZNF784_counts-pos.pattern_10.n_20-vs-ZNF784-201.alignment counts-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-201/Hughes_GR_models_ZNF784_counts-pos.pattern_1.n_33-vs-ZNF784-201.alignment counts-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-201/Hughes_GR_models_ZNF784_counts-pos.pattern_2.n_29-vs-ZNF784-201.alignment counts-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-201/Hughes_GR_models_ZNF784_counts-pos.pattern_3.n_28-vs-ZNF784-201.alignment counts-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-201/Hughes_GR_models_ZNF784_counts-pos.pattern_4.n_28-vs-ZNF784-201.alignment counts-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-201/Hughes_GR_models_ZNF784_counts-pos.pattern_5.n_27-vs-ZNF784-201.alignment counts-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-201/Hughes_GR_models_ZNF784_counts-pos.pattern_6.n_26-vs-ZNF784-201.alignment counts-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-201/Hughes_GR_models_ZNF784_counts-pos.pattern_7.n_24-vs-ZNF784-201.alignment counts-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-201/Hughes_GR_models_ZNF784_counts-pos.pattern_8.n_22-vs-ZNF784-201.alignment counts-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-201/Hughes_GR_models_ZNF784_counts-pos.pattern_9.n_21-vs-ZNF784-201.alignment counts-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-201/neg_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_0.n_77-vs-ZNF784-201.alignment counts-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-201/neg_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_1.n_74-vs-ZNF784-201.alignment counts-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-201/neg_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_2.n_63-vs-ZNF784-201.alignment counts-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-201/neg_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_3.n_61-vs-ZNF784-201.alignment counts-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-201/neg_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_4.n_53-vs-ZNF784-201.alignment counts-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-201/neg_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_5.n_53-vs-ZNF784-201.alignment counts-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-201/neg_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_6.n_30-vs-ZNF784-201.alignment counts-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-201/neg_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_7.n_23-vs-ZNF784-201.alignment counts-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-201/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_0.n_3209-vs-ZNF784-201.alignment counts-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-201/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_10.n_298-vs-ZNF784-201.alignment counts-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-201/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_11.n_203-vs-ZNF784-201.alignment counts-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-201/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_12.n_197-vs-ZNF784-201.alignment counts-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-201/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_13.n_132-vs-ZNF784-201.alignment counts-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-201/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_14.n_92-vs-ZNF784-201.alignment counts-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-201/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_15.n_71-vs-ZNF784-201.alignment counts-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-201/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_16.n_27-vs-ZNF784-201.alignment counts-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-201/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_1.n_2511-vs-ZNF784-201.alignment counts-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-201/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_2.n_1237-vs-ZNF784-201.alignment counts-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-201/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_3.n_708-vs-ZNF784-201.alignment counts-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-201/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_4.n_655-vs-ZNF784-201.alignment counts-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-201/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_5.n_436-vs-ZNF784-201.alignment counts-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-201/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_6.n_424-vs-ZNF784-201.alignment counts-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-201/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_7.n_407-vs-ZNF784-201.alignment counts-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-201/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_8.n_361-vs-ZNF784-201.alignment counts-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-201/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_9.n_324-vs-ZNF784-201.alignment counts-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-202/Hughes_GR_models_ZNF784_counts-pos.pattern_0.n_37-vs-ZNF784-202.alignment counts-znf_b1h_alignment/ZNF784-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-202/Hughes_GR_models_ZNF784_counts-pos.pattern_10.n_20-vs-ZNF784-202.alignment counts-znf_b1h_alignment/ZNF784-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-202/Hughes_GR_models_ZNF784_counts-pos.pattern_1.n_33-vs-ZNF784-202.alignment counts-znf_b1h_alignment/ZNF784-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-202/Hughes_GR_models_ZNF784_counts-pos.pattern_2.n_29-vs-ZNF784-202.alignment counts-znf_b1h_alignment/ZNF784-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-202/Hughes_GR_models_ZNF784_counts-pos.pattern_3.n_28-vs-ZNF784-202.alignment counts-znf_b1h_alignment/ZNF784-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-202/Hughes_GR_models_ZNF784_counts-pos.pattern_4.n_28-vs-ZNF784-202.alignment counts-znf_b1h_alignment/ZNF784-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-202/Hughes_GR_models_ZNF784_counts-pos.pattern_5.n_27-vs-ZNF784-202.alignment counts-znf_b1h_alignment/ZNF784-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-202/Hughes_GR_models_ZNF784_counts-pos.pattern_6.n_26-vs-ZNF784-202.alignment counts-znf_b1h_alignment/ZNF784-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-202/Hughes_GR_models_ZNF784_counts-pos.pattern_7.n_24-vs-ZNF784-202.alignment counts-znf_b1h_alignment/ZNF784-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-202/Hughes_GR_models_ZNF784_counts-pos.pattern_8.n_22-vs-ZNF784-202.alignment counts-znf_b1h_alignment/ZNF784-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-202/Hughes_GR_models_ZNF784_counts-pos.pattern_9.n_21-vs-ZNF784-202.alignment counts-znf_b1h_alignment/ZNF784-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-202/neg_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_0.n_77-vs-ZNF784-202.alignment counts-znf_b1h_alignment/ZNF784-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-202/neg_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_1.n_74-vs-ZNF784-202.alignment counts-znf_b1h_alignment/ZNF784-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-202/neg_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_2.n_63-vs-ZNF784-202.alignment counts-znf_b1h_alignment/ZNF784-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-202/neg_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_3.n_61-vs-ZNF784-202.alignment counts-znf_b1h_alignment/ZNF784-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-202/neg_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_4.n_53-vs-ZNF784-202.alignment counts-znf_b1h_alignment/ZNF784-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-202/neg_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_5.n_53-vs-ZNF784-202.alignment counts-znf_b1h_alignment/ZNF784-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-202/neg_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_6.n_30-vs-ZNF784-202.alignment counts-znf_b1h_alignment/ZNF784-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-202/neg_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_7.n_23-vs-ZNF784-202.alignment counts-znf_b1h_alignment/ZNF784-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-202/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_0.n_3209-vs-ZNF784-202.alignment counts-znf_b1h_alignment/ZNF784-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-202/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_10.n_298-vs-ZNF784-202.alignment counts-znf_b1h_alignment/ZNF784-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-202/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_11.n_203-vs-ZNF784-202.alignment counts-znf_b1h_alignment/ZNF784-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-202/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_12.n_197-vs-ZNF784-202.alignment counts-znf_b1h_alignment/ZNF784-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-202/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_13.n_132-vs-ZNF784-202.alignment counts-znf_b1h_alignment/ZNF784-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-202/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_14.n_92-vs-ZNF784-202.alignment counts-znf_b1h_alignment/ZNF784-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-202/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_15.n_71-vs-ZNF784-202.alignment counts-znf_b1h_alignment/ZNF784-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-202/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_16.n_27-vs-ZNF784-202.alignment counts-znf_b1h_alignment/ZNF784-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-202/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_1.n_2511-vs-ZNF784-202.alignment counts-znf_b1h_alignment/ZNF784-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-202/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_2.n_1237-vs-ZNF784-202.alignment counts-znf_b1h_alignment/ZNF784-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-202/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_3.n_708-vs-ZNF784-202.alignment counts-znf_b1h_alignment/ZNF784-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-202/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_4.n_655-vs-ZNF784-202.alignment counts-znf_b1h_alignment/ZNF784-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-202/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_5.n_436-vs-ZNF784-202.alignment counts-znf_b1h_alignment/ZNF784-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-202/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_6.n_424-vs-ZNF784-202.alignment counts-znf_b1h_alignment/ZNF784-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-202/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_7.n_407-vs-ZNF784-202.alignment counts-znf_b1h_alignment/ZNF784-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-202/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_8.n_361-vs-ZNF784-202.alignment counts-znf_b1h_alignment/ZNF784-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF784-202/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_counts_pattern_9.n_324-vs-ZNF784-202.alignment counts-znf_b1h_alignment/ZNF784-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF785-201/ChipExo_models_ZNF785_counts-pos.pattern_0.n_90-vs-ZNF785-201.alignment counts-znf_b1h_alignment/ZNF785-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF785-201/ChipExo_models_ZNF785_counts-pos.pattern_1.n_29-vs-ZNF785-201.alignment counts-znf_b1h_alignment/ZNF785-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF785-201/pos_patterns.ENCSR222TVA_ChIP_ZNF785_K562_ENCSR297TRP_counts_pattern_0.n_123-vs-ZNF785-201.alignment counts-znf_b1h_alignment/ZNF785-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF785-201/pos_patterns.ENCSR222TVA_ChIP_ZNF785_K562_ENCSR297TRP_counts_pattern_1.n_47-vs-ZNF785-201.alignment counts-znf_b1h_alignment/ZNF785-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF785-201/pos_patterns.ENCSR222TVA_ChIP_ZNF785_K562_ENCSR297TRP_counts_pattern_2.n_22-vs-ZNF785-201.alignment counts-znf_b1h_alignment/ZNF785-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF785-201/pos_patterns.ENCSR950ACO_ChIP_ZNF785_HEK293_ENCSR360XIY_counts_pattern_0.n_1452-vs-ZNF785-201.alignment counts-znf_b1h_alignment/ZNF785-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF785-201/pos_patterns.ENCSR950ACO_ChIP_ZNF785_HEK293_ENCSR360XIY_counts_pattern_10.n_56-vs-ZNF785-201.alignment counts-znf_b1h_alignment/ZNF785-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF785-201/pos_patterns.ENCSR950ACO_ChIP_ZNF785_HEK293_ENCSR360XIY_counts_pattern_11.n_33-vs-ZNF785-201.alignment counts-znf_b1h_alignment/ZNF785-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF785-201/pos_patterns.ENCSR950ACO_ChIP_ZNF785_HEK293_ENCSR360XIY_counts_pattern_12.n_21-vs-ZNF785-201.alignment counts-znf_b1h_alignment/ZNF785-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF785-201/pos_patterns.ENCSR950ACO_ChIP_ZNF785_HEK293_ENCSR360XIY_counts_pattern_13.n_20-vs-ZNF785-201.alignment counts-znf_b1h_alignment/ZNF785-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF785-201/pos_patterns.ENCSR950ACO_ChIP_ZNF785_HEK293_ENCSR360XIY_counts_pattern_1.n_816-vs-ZNF785-201.alignment counts-znf_b1h_alignment/ZNF785-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF785-201/pos_patterns.ENCSR950ACO_ChIP_ZNF785_HEK293_ENCSR360XIY_counts_pattern_2.n_402-vs-ZNF785-201.alignment counts-znf_b1h_alignment/ZNF785-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF785-201/pos_patterns.ENCSR950ACO_ChIP_ZNF785_HEK293_ENCSR360XIY_counts_pattern_3.n_178-vs-ZNF785-201.alignment counts-znf_b1h_alignment/ZNF785-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF785-201/pos_patterns.ENCSR950ACO_ChIP_ZNF785_HEK293_ENCSR360XIY_counts_pattern_4.n_167-vs-ZNF785-201.alignment counts-znf_b1h_alignment/ZNF785-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF785-201/pos_patterns.ENCSR950ACO_ChIP_ZNF785_HEK293_ENCSR360XIY_counts_pattern_5.n_109-vs-ZNF785-201.alignment counts-znf_b1h_alignment/ZNF785-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF785-201/pos_patterns.ENCSR950ACO_ChIP_ZNF785_HEK293_ENCSR360XIY_counts_pattern_6.n_96-vs-ZNF785-201.alignment counts-znf_b1h_alignment/ZNF785-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF785-201/pos_patterns.ENCSR950ACO_ChIP_ZNF785_HEK293_ENCSR360XIY_counts_pattern_7.n_93-vs-ZNF785-201.alignment counts-znf_b1h_alignment/ZNF785-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF785-201/pos_patterns.ENCSR950ACO_ChIP_ZNF785_HEK293_ENCSR360XIY_counts_pattern_8.n_89-vs-ZNF785-201.alignment counts-znf_b1h_alignment/ZNF785-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF785-201/pos_patterns.ENCSR950ACO_ChIP_ZNF785_HEK293_ENCSR360XIY_counts_pattern_9.n_76-vs-ZNF785-201.alignment counts-znf_b1h_alignment/ZNF785-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/ChipExo_models_ZNF786_counts-pos.pattern_0.n_2385-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/ChipExo_models_ZNF786_counts-pos.pattern_1.n_502-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/ChipExo_models_ZNF786_counts-pos.pattern_2.n_65-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/ChipExo_models_ZNF786_counts-pos.pattern_3.n_60-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/neg_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_0.n_589-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/neg_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_10.n_77-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/neg_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_11.n_72-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/neg_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_12.n_71-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/neg_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_13.n_60-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/neg_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_14.n_58-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/neg_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_15.n_49-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/neg_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_16.n_47-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/neg_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_17.n_43-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/neg_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_18.n_32-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/neg_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_19.n_31-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/neg_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_1.n_436-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/neg_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_20.n_20-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/neg_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_2.n_177-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/neg_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_3.n_173-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/neg_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_4.n_163-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/neg_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_5.n_92-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/neg_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_6.n_90-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/neg_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_7.n_84-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/neg_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_8.n_80-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/neg_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_9.n_80-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/pos_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_0.n_2454-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/pos_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_10.n_297-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/pos_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_11.n_293-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/pos_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_12.n_270-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/pos_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_13.n_265-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/pos_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_14.n_248-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/pos_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_15.n_247-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/pos_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_16.n_197-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/pos_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_17.n_168-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/pos_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_18.n_160-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/pos_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_19.n_133-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/pos_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_1.n_1261-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/pos_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_20.n_100-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/pos_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_21.n_97-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/pos_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_22.n_48-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/pos_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_23.n_37-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/pos_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_2.n_640-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/pos_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_3.n_397-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/pos_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_4.n_381-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/pos_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_5.n_358-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/pos_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_6.n_350-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/pos_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_7.n_339-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/pos_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_8.n_331-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF786-202/pos_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_counts_pattern_9.n_306-vs-ZNF786-202.alignment counts-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF789-201/ChipExo_models_ZNF789_counts-pos.pattern_0.n_637-vs-ZNF789-201.alignment counts-znf_b1h_alignment/ZNF789-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF790-201/ChipExo_models_ZNF790_counts-pos.pattern_0.n_146-vs-ZNF790-201.alignment counts-znf_b1h_alignment/ZNF790-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF790-201/pos_patterns.ENCSR117XJA_ChIP_ZNF790_HepG2_ENCSR194RBA_counts_pattern_0.n_1723-vs-ZNF790-201.alignment counts-znf_b1h_alignment/ZNF790-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF790-201/pos_patterns.ENCSR117XJA_ChIP_ZNF790_HepG2_ENCSR194RBA_counts_pattern_10.n_138-vs-ZNF790-201.alignment counts-znf_b1h_alignment/ZNF790-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF790-201/pos_patterns.ENCSR117XJA_ChIP_ZNF790_HepG2_ENCSR194RBA_counts_pattern_11.n_95-vs-ZNF790-201.alignment counts-znf_b1h_alignment/ZNF790-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF790-201/pos_patterns.ENCSR117XJA_ChIP_ZNF790_HepG2_ENCSR194RBA_counts_pattern_12.n_88-vs-ZNF790-201.alignment counts-znf_b1h_alignment/ZNF790-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF790-201/pos_patterns.ENCSR117XJA_ChIP_ZNF790_HepG2_ENCSR194RBA_counts_pattern_13.n_88-vs-ZNF790-201.alignment counts-znf_b1h_alignment/ZNF790-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF790-201/pos_patterns.ENCSR117XJA_ChIP_ZNF790_HepG2_ENCSR194RBA_counts_pattern_14.n_74-vs-ZNF790-201.alignment counts-znf_b1h_alignment/ZNF790-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF790-201/pos_patterns.ENCSR117XJA_ChIP_ZNF790_HepG2_ENCSR194RBA_counts_pattern_15.n_73-vs-ZNF790-201.alignment counts-znf_b1h_alignment/ZNF790-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF790-201/pos_patterns.ENCSR117XJA_ChIP_ZNF790_HepG2_ENCSR194RBA_counts_pattern_16.n_63-vs-ZNF790-201.alignment counts-znf_b1h_alignment/ZNF790-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF790-201/pos_patterns.ENCSR117XJA_ChIP_ZNF790_HepG2_ENCSR194RBA_counts_pattern_17.n_50-vs-ZNF790-201.alignment counts-znf_b1h_alignment/ZNF790-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF790-201/pos_patterns.ENCSR117XJA_ChIP_ZNF790_HepG2_ENCSR194RBA_counts_pattern_18.n_47-vs-ZNF790-201.alignment counts-znf_b1h_alignment/ZNF790-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF790-201/pos_patterns.ENCSR117XJA_ChIP_ZNF790_HepG2_ENCSR194RBA_counts_pattern_19.n_45-vs-ZNF790-201.alignment counts-znf_b1h_alignment/ZNF790-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF790-201/pos_patterns.ENCSR117XJA_ChIP_ZNF790_HepG2_ENCSR194RBA_counts_pattern_1.n_1255-vs-ZNF790-201.alignment counts-znf_b1h_alignment/ZNF790-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF790-201/pos_patterns.ENCSR117XJA_ChIP_ZNF790_HepG2_ENCSR194RBA_counts_pattern_20.n_44-vs-ZNF790-201.alignment counts-znf_b1h_alignment/ZNF790-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF790-201/pos_patterns.ENCSR117XJA_ChIP_ZNF790_HepG2_ENCSR194RBA_counts_pattern_21.n_40-vs-ZNF790-201.alignment counts-znf_b1h_alignment/ZNF790-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF790-201/pos_patterns.ENCSR117XJA_ChIP_ZNF790_HepG2_ENCSR194RBA_counts_pattern_22.n_25-vs-ZNF790-201.alignment counts-znf_b1h_alignment/ZNF790-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF790-201/pos_patterns.ENCSR117XJA_ChIP_ZNF790_HepG2_ENCSR194RBA_counts_pattern_23.n_24-vs-ZNF790-201.alignment counts-znf_b1h_alignment/ZNF790-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF790-201/pos_patterns.ENCSR117XJA_ChIP_ZNF790_HepG2_ENCSR194RBA_counts_pattern_2.n_962-vs-ZNF790-201.alignment counts-znf_b1h_alignment/ZNF790-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF790-201/pos_patterns.ENCSR117XJA_ChIP_ZNF790_HepG2_ENCSR194RBA_counts_pattern_3.n_781-vs-ZNF790-201.alignment counts-znf_b1h_alignment/ZNF790-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF790-201/pos_patterns.ENCSR117XJA_ChIP_ZNF790_HepG2_ENCSR194RBA_counts_pattern_4.n_710-vs-ZNF790-201.alignment counts-znf_b1h_alignment/ZNF790-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF790-201/pos_patterns.ENCSR117XJA_ChIP_ZNF790_HepG2_ENCSR194RBA_counts_pattern_5.n_251-vs-ZNF790-201.alignment counts-znf_b1h_alignment/ZNF790-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF790-201/pos_patterns.ENCSR117XJA_ChIP_ZNF790_HepG2_ENCSR194RBA_counts_pattern_6.n_229-vs-ZNF790-201.alignment counts-znf_b1h_alignment/ZNF790-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF790-201/pos_patterns.ENCSR117XJA_ChIP_ZNF790_HepG2_ENCSR194RBA_counts_pattern_7.n_207-vs-ZNF790-201.alignment counts-znf_b1h_alignment/ZNF790-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF790-201/pos_patterns.ENCSR117XJA_ChIP_ZNF790_HepG2_ENCSR194RBA_counts_pattern_8.n_164-vs-ZNF790-201.alignment counts-znf_b1h_alignment/ZNF790-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF790-201/pos_patterns.ENCSR117XJA_ChIP_ZNF790_HepG2_ENCSR194RBA_counts_pattern_9.n_158-vs-ZNF790-201.alignment counts-znf_b1h_alignment/ZNF790-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF791-201/ChipExo_models_ZNF791_counts-pos.pattern_0.n_179-vs-ZNF791-201.alignment counts-znf_b1h_alignment/ZNF791-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF791-201/ChipExo_models_ZNF791_counts-pos.pattern_1.n_22-vs-ZNF791-201.alignment counts-znf_b1h_alignment/ZNF791-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF791-201/pos_patterns.ENCSR775HFF_ChIP_ZNF791_HEK293_ENCSR836ELF_counts_pattern_0.n_1104-vs-ZNF791-201.alignment counts-znf_b1h_alignment/ZNF791-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF791-201/pos_patterns.ENCSR775HFF_ChIP_ZNF791_HEK293_ENCSR836ELF_counts_pattern_10.n_24-vs-ZNF791-201.alignment counts-znf_b1h_alignment/ZNF791-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF791-201/pos_patterns.ENCSR775HFF_ChIP_ZNF791_HEK293_ENCSR836ELF_counts_pattern_1.n_536-vs-ZNF791-201.alignment counts-znf_b1h_alignment/ZNF791-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF791-201/pos_patterns.ENCSR775HFF_ChIP_ZNF791_HEK293_ENCSR836ELF_counts_pattern_2.n_193-vs-ZNF791-201.alignment counts-znf_b1h_alignment/ZNF791-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF791-201/pos_patterns.ENCSR775HFF_ChIP_ZNF791_HEK293_ENCSR836ELF_counts_pattern_3.n_150-vs-ZNF791-201.alignment counts-znf_b1h_alignment/ZNF791-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF791-201/pos_patterns.ENCSR775HFF_ChIP_ZNF791_HEK293_ENCSR836ELF_counts_pattern_4.n_93-vs-ZNF791-201.alignment counts-znf_b1h_alignment/ZNF791-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF791-201/pos_patterns.ENCSR775HFF_ChIP_ZNF791_HEK293_ENCSR836ELF_counts_pattern_5.n_87-vs-ZNF791-201.alignment counts-znf_b1h_alignment/ZNF791-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF791-201/pos_patterns.ENCSR775HFF_ChIP_ZNF791_HEK293_ENCSR836ELF_counts_pattern_6.n_74-vs-ZNF791-201.alignment counts-znf_b1h_alignment/ZNF791-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF791-201/pos_patterns.ENCSR775HFF_ChIP_ZNF791_HEK293_ENCSR836ELF_counts_pattern_7.n_42-vs-ZNF791-201.alignment counts-znf_b1h_alignment/ZNF791-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF791-201/pos_patterns.ENCSR775HFF_ChIP_ZNF791_HEK293_ENCSR836ELF_counts_pattern_8.n_35-vs-ZNF791-201.alignment counts-znf_b1h_alignment/ZNF791-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF791-201/pos_patterns.ENCSR775HFF_ChIP_ZNF791_HEK293_ENCSR836ELF_counts_pattern_9.n_32-vs-ZNF791-201.alignment counts-znf_b1h_alignment/ZNF791-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF79-201/ChipExo_models_ZNF79_counts-pos.pattern_0.n_734-vs-ZNF79-201.alignment counts-znf_b1h_alignment/ZNF79-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF79-201/ChipExo_models_ZNF79_counts-pos.pattern_1.n_70-vs-ZNF79-201.alignment counts-znf_b1h_alignment/ZNF79-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF79-201/pos_patterns.ENCSR995FUM_ChIP_ZNF79_K562_ENCSR384BIM_counts_pattern_0.n_1583-vs-ZNF79-201.alignment counts-znf_b1h_alignment/ZNF79-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF79-201/pos_patterns.ENCSR995FUM_ChIP_ZNF79_K562_ENCSR384BIM_counts_pattern_1.n_658-vs-ZNF79-201.alignment counts-znf_b1h_alignment/ZNF79-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF79-201/pos_patterns.ENCSR995FUM_ChIP_ZNF79_K562_ENCSR384BIM_counts_pattern_2.n_92-vs-ZNF79-201.alignment counts-znf_b1h_alignment/ZNF79-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF79-201/pos_patterns.ENCSR995FUM_ChIP_ZNF79_K562_ENCSR384BIM_counts_pattern_3.n_26-vs-ZNF79-201.alignment counts-znf_b1h_alignment/ZNF79-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF79-201/pos_patterns.ENCSR995FUM_ChIP_ZNF79_K562_ENCSR384BIM_counts_pattern_4.n_25-vs-ZNF79-201.alignment counts-znf_b1h_alignment/ZNF79-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF79-201/pos_patterns.ENCSR995FUM_ChIP_ZNF79_K562_ENCSR384BIM_counts_pattern_5.n_21-vs-ZNF79-201.alignment counts-znf_b1h_alignment/ZNF79-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF792-201/ChipExo_models_ZNF792_counts-pos.pattern_0.n_445-vs-ZNF792-201.alignment counts-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF792-201/pos_patterns.ENCSR396SOH_ChIP_ZNF792_HepG2_ENCSR111ZKX_counts_pattern_0.n_4432-vs-ZNF792-201.alignment counts-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF792-201/pos_patterns.ENCSR396SOH_ChIP_ZNF792_HepG2_ENCSR111ZKX_counts_pattern_10.n_474-vs-ZNF792-201.alignment counts-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF792-201/pos_patterns.ENCSR396SOH_ChIP_ZNF792_HepG2_ENCSR111ZKX_counts_pattern_11.n_75-vs-ZNF792-201.alignment counts-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF792-201/pos_patterns.ENCSR396SOH_ChIP_ZNF792_HepG2_ENCSR111ZKX_counts_pattern_12.n_61-vs-ZNF792-201.alignment counts-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF792-201/pos_patterns.ENCSR396SOH_ChIP_ZNF792_HepG2_ENCSR111ZKX_counts_pattern_13.n_27-vs-ZNF792-201.alignment counts-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF792-201/pos_patterns.ENCSR396SOH_ChIP_ZNF792_HepG2_ENCSR111ZKX_counts_pattern_1.n_3256-vs-ZNF792-201.alignment counts-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF792-201/pos_patterns.ENCSR396SOH_ChIP_ZNF792_HepG2_ENCSR111ZKX_counts_pattern_2.n_1638-vs-ZNF792-201.alignment counts-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF792-201/pos_patterns.ENCSR396SOH_ChIP_ZNF792_HepG2_ENCSR111ZKX_counts_pattern_3.n_1238-vs-ZNF792-201.alignment counts-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF792-201/pos_patterns.ENCSR396SOH_ChIP_ZNF792_HepG2_ENCSR111ZKX_counts_pattern_4.n_1002-vs-ZNF792-201.alignment counts-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF792-201/pos_patterns.ENCSR396SOH_ChIP_ZNF792_HepG2_ENCSR111ZKX_counts_pattern_5.n_897-vs-ZNF792-201.alignment counts-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF792-201/pos_patterns.ENCSR396SOH_ChIP_ZNF792_HepG2_ENCSR111ZKX_counts_pattern_6.n_554-vs-ZNF792-201.alignment counts-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF792-201/pos_patterns.ENCSR396SOH_ChIP_ZNF792_HepG2_ENCSR111ZKX_counts_pattern_7.n_523-vs-ZNF792-201.alignment counts-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF792-201/pos_patterns.ENCSR396SOH_ChIP_ZNF792_HepG2_ENCSR111ZKX_counts_pattern_8.n_514-vs-ZNF792-201.alignment counts-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF792-201/pos_patterns.ENCSR396SOH_ChIP_ZNF792_HepG2_ENCSR111ZKX_counts_pattern_9.n_479-vs-ZNF792-201.alignment counts-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF792-201/pos_patterns.ENCSR679STZ_ChIP_ZNF792_HEK293_ENCSR594DKD_counts_pattern_0.n_691-vs-ZNF792-201.alignment counts-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF792-201/pos_patterns.ENCSR679STZ_ChIP_ZNF792_HEK293_ENCSR594DKD_counts_pattern_1.n_558-vs-ZNF792-201.alignment counts-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF792-201/pos_patterns.ENCSR679STZ_ChIP_ZNF792_HEK293_ENCSR594DKD_counts_pattern_2.n_315-vs-ZNF792-201.alignment counts-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF792-201/pos_patterns.ENCSR679STZ_ChIP_ZNF792_HEK293_ENCSR594DKD_counts_pattern_3.n_130-vs-ZNF792-201.alignment counts-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF792-201/pos_patterns.ENCSR679STZ_ChIP_ZNF792_HEK293_ENCSR594DKD_counts_pattern_4.n_110-vs-ZNF792-201.alignment counts-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF792-201/pos_patterns.ENCSR679STZ_ChIP_ZNF792_HEK293_ENCSR594DKD_counts_pattern_5.n_90-vs-ZNF792-201.alignment counts-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF792-201/pos_patterns.ENCSR679STZ_ChIP_ZNF792_HEK293_ENCSR594DKD_counts_pattern_6.n_88-vs-ZNF792-201.alignment counts-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF792-201/pos_patterns.ENCSR679STZ_ChIP_ZNF792_HEK293_ENCSR594DKD_counts_pattern_7.n_83-vs-ZNF792-201.alignment counts-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF792-201/pos_patterns.ENCSR679STZ_ChIP_ZNF792_HEK293_ENCSR594DKD_counts_pattern_8.n_22-vs-ZNF792-201.alignment counts-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF799-201/ChipExo_models_ZNF799_counts-pos.pattern_0.n_219-vs-ZNF799-201.alignment counts-znf_b1h_alignment/ZNF799-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF799-201/ChipExo_models_ZNF799_counts-pos.pattern_1.n_164-vs-ZNF799-201.alignment counts-znf_b1h_alignment/ZNF799-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF799-201/ChipExo_models_ZNF799_counts-pos.pattern_2.n_99-vs-ZNF799-201.alignment counts-znf_b1h_alignment/ZNF799-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF799-201/ChipExo_models_ZNF799_counts-pos.pattern_3.n_75-vs-ZNF799-201.alignment counts-znf_b1h_alignment/ZNF799-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF799-201/ChipExo_models_ZNF799_counts-pos.pattern_4.n_56-vs-ZNF799-201.alignment counts-znf_b1h_alignment/ZNF799-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF799-201/ChipExo_models_ZNF799_counts-pos.pattern_5.n_55-vs-ZNF799-201.alignment counts-znf_b1h_alignment/ZNF799-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF799-201/ChipExo_models_ZNF799_counts-pos.pattern_6.n_52-vs-ZNF799-201.alignment counts-znf_b1h_alignment/ZNF799-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF800-201/pos_patterns.ENCSR701WPG_ChIP_ZNF800_HepG2_ENCSR786LIM_counts_pattern_0.n_8582-vs-ZNF800-201.alignment counts-znf_b1h_alignment/ZNF800-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF800-201/pos_patterns.ENCSR701WPG_ChIP_ZNF800_HepG2_ENCSR786LIM_counts_pattern_1.n_303-vs-ZNF800-201.alignment counts-znf_b1h_alignment/ZNF800-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF800-201/pos_patterns.ENCSR701WPG_ChIP_ZNF800_HepG2_ENCSR786LIM_counts_pattern_2.n_261-vs-ZNF800-201.alignment counts-znf_b1h_alignment/ZNF800-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF800-201/pos_patterns.ENCSR701WPG_ChIP_ZNF800_HepG2_ENCSR786LIM_counts_pattern_3.n_247-vs-ZNF800-201.alignment counts-znf_b1h_alignment/ZNF800-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF800-201/pos_patterns.ENCSR701WPG_ChIP_ZNF800_HepG2_ENCSR786LIM_counts_pattern_4.n_208-vs-ZNF800-201.alignment counts-znf_b1h_alignment/ZNF800-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF800-201/pos_patterns.ENCSR701WPG_ChIP_ZNF800_HepG2_ENCSR786LIM_counts_pattern_5.n_33-vs-ZNF800-201.alignment counts-znf_b1h_alignment/ZNF800-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF800-208/pos_patterns.ENCSR701WPG_ChIP_ZNF800_HepG2_ENCSR786LIM_counts_pattern_0.n_8582-vs-ZNF800-208.alignment counts-znf_b1h_alignment/ZNF800-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF800-208/pos_patterns.ENCSR701WPG_ChIP_ZNF800_HepG2_ENCSR786LIM_counts_pattern_1.n_303-vs-ZNF800-208.alignment counts-znf_b1h_alignment/ZNF800-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF800-208/pos_patterns.ENCSR701WPG_ChIP_ZNF800_HepG2_ENCSR786LIM_counts_pattern_2.n_261-vs-ZNF800-208.alignment counts-znf_b1h_alignment/ZNF800-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF800-208/pos_patterns.ENCSR701WPG_ChIP_ZNF800_HepG2_ENCSR786LIM_counts_pattern_3.n_247-vs-ZNF800-208.alignment counts-znf_b1h_alignment/ZNF800-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF800-208/pos_patterns.ENCSR701WPG_ChIP_ZNF800_HepG2_ENCSR786LIM_counts_pattern_4.n_208-vs-ZNF800-208.alignment counts-znf_b1h_alignment/ZNF800-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF800-208/pos_patterns.ENCSR701WPG_ChIP_ZNF800_HepG2_ENCSR786LIM_counts_pattern_5.n_33-vs-ZNF800-208.alignment counts-znf_b1h_alignment/ZNF800-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF805-201/ChipExo_models_ZNF805_counts-pos.pattern_0.n_548-vs-ZNF805-201.alignment counts-znf_b1h_alignment/ZNF805-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF805-201/ChipExo_models_ZNF805_counts-pos.pattern_1.n_78-vs-ZNF805-201.alignment counts-znf_b1h_alignment/ZNF805-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF808-201/ChipExo_models_ZNF808_counts-pos.pattern_0.n_1469-vs-ZNF808-201.alignment counts-znf_b1h_alignment/ZNF808-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF808-201/ChipExo_models_ZNF808_counts-pos.pattern_1.n_589-vs-ZNF808-201.alignment counts-znf_b1h_alignment/ZNF808-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF808-201/ChipExo_models_ZNF808_counts-pos.pattern_2.n_79-vs-ZNF808-201.alignment counts-znf_b1h_alignment/ZNF808-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF808-201/ChipExo_models_ZNF808_counts-pos.pattern_3.n_64-vs-ZNF808-201.alignment counts-znf_b1h_alignment/ZNF808-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF808-201/ChipExo_models_ZNF808_counts-pos.pattern_4.n_29-vs-ZNF808-201.alignment counts-znf_b1h_alignment/ZNF808-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF808-201/ChipExo_models_ZNF808_counts-pos.pattern_5.n_23-vs-ZNF808-201.alignment counts-znf_b1h_alignment/ZNF808-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF81-202/ChipExo_models_ZNF81_counts-pos.pattern_0.n_1067-vs-ZNF81-202.alignment counts-znf_b1h_alignment/ZNF81-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF816-203/ChipExo_models_ZNF816_counts-pos.pattern_0.n_364-vs-ZNF816-203.alignment counts-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF816-203/Hughes_GR_models_ZNF816_counts-neg.pattern_0.n_20-vs-ZNF816-203.alignment counts-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF816-203/Hughes_GR_models_ZNF816_counts-pos.pattern_0.n_1554-vs-ZNF816-203.alignment counts-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_counts_pattern_0.n_1439-vs-ZNF816-203.alignment counts-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_counts_pattern_10.n_365-vs-ZNF816-203.alignment counts-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_counts_pattern_11.n_308-vs-ZNF816-203.alignment counts-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_counts_pattern_12.n_277-vs-ZNF816-203.alignment counts-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_counts_pattern_13.n_274-vs-ZNF816-203.alignment counts-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_counts_pattern_14.n_249-vs-ZNF816-203.alignment counts-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_counts_pattern_15.n_239-vs-ZNF816-203.alignment counts-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_counts_pattern_16.n_203-vs-ZNF816-203.alignment counts-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_counts_pattern_17.n_190-vs-ZNF816-203.alignment counts-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_counts_pattern_18.n_131-vs-ZNF816-203.alignment counts-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_counts_pattern_19.n_112-vs-ZNF816-203.alignment counts-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_counts_pattern_1.n_1068-vs-ZNF816-203.alignment counts-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_counts_pattern_20.n_95-vs-ZNF816-203.alignment counts-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_counts_pattern_21.n_69-vs-ZNF816-203.alignment counts-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_counts_pattern_22.n_67-vs-ZNF816-203.alignment counts-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_counts_pattern_23.n_60-vs-ZNF816-203.alignment counts-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_counts_pattern_24.n_48-vs-ZNF816-203.alignment counts-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_counts_pattern_25.n_47-vs-ZNF816-203.alignment counts-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_counts_pattern_26.n_38-vs-ZNF816-203.alignment counts-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_counts_pattern_27.n_25-vs-ZNF816-203.alignment counts-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_counts_pattern_2.n_877-vs-ZNF816-203.alignment counts-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_counts_pattern_3.n_518-vs-ZNF816-203.alignment counts-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_counts_pattern_4.n_490-vs-ZNF816-203.alignment counts-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_counts_pattern_5.n_465-vs-ZNF816-203.alignment counts-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_counts_pattern_6.n_446-vs-ZNF816-203.alignment counts-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_counts_pattern_7.n_405-vs-ZNF816-203.alignment counts-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_counts_pattern_8.n_404-vs-ZNF816-203.alignment counts-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_counts_pattern_9.n_400-vs-ZNF816-203.alignment counts-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF8-201/ChipExo_models_ZNF8_counts-pos.pattern_0.n_182-vs-ZNF8-201.alignment counts-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF8-201/ChipExo_models_ZNF8_counts-pos.pattern_1.n_38-vs-ZNF8-201.alignment counts-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF8-201/Hughes_GR_models_ZNF8_counts-pos.pattern_0.n_2603-vs-ZNF8-201.alignment counts-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF8-201/Hughes_GR_models_ZNF8_counts-pos.pattern_1.n_22-vs-ZNF8-201.alignment counts-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR325QLX_ChIP_ZNF8_SK-N-SH_ENCSR812AAD_counts_pattern_0.n_7694-vs-ZNF8-201.alignment counts-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR325QLX_ChIP_ZNF8_SK-N-SH_ENCSR812AAD_counts_pattern_10.n_32-vs-ZNF8-201.alignment counts-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR325QLX_ChIP_ZNF8_SK-N-SH_ENCSR812AAD_counts_pattern_11.n_20-vs-ZNF8-201.alignment counts-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR325QLX_ChIP_ZNF8_SK-N-SH_ENCSR812AAD_counts_pattern_1.n_4983-vs-ZNF8-201.alignment counts-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR325QLX_ChIP_ZNF8_SK-N-SH_ENCSR812AAD_counts_pattern_2.n_958-vs-ZNF8-201.alignment counts-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR325QLX_ChIP_ZNF8_SK-N-SH_ENCSR812AAD_counts_pattern_3.n_531-vs-ZNF8-201.alignment counts-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR325QLX_ChIP_ZNF8_SK-N-SH_ENCSR812AAD_counts_pattern_4.n_234-vs-ZNF8-201.alignment counts-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR325QLX_ChIP_ZNF8_SK-N-SH_ENCSR812AAD_counts_pattern_5.n_161-vs-ZNF8-201.alignment counts-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR325QLX_ChIP_ZNF8_SK-N-SH_ENCSR812AAD_counts_pattern_6.n_104-vs-ZNF8-201.alignment counts-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR325QLX_ChIP_ZNF8_SK-N-SH_ENCSR812AAD_counts_pattern_7.n_60-vs-ZNF8-201.alignment counts-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR325QLX_ChIP_ZNF8_SK-N-SH_ENCSR812AAD_counts_pattern_8.n_53-vs-ZNF8-201.alignment counts-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR325QLX_ChIP_ZNF8_SK-N-SH_ENCSR812AAD_counts_pattern_9.n_41-vs-ZNF8-201.alignment counts-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR785UCD_ChIP_ZNF8_MCF-7_ENCSR311BIU_counts_pattern_0.n_216-vs-ZNF8-201.alignment counts-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR785UCD_ChIP_ZNF8_MCF-7_ENCSR311BIU_counts_pattern_1.n_173-vs-ZNF8-201.alignment counts-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR785UCD_ChIP_ZNF8_MCF-7_ENCSR311BIU_counts_pattern_2.n_151-vs-ZNF8-201.alignment counts-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR785UCD_ChIP_ZNF8_MCF-7_ENCSR311BIU_counts_pattern_3.n_91-vs-ZNF8-201.alignment counts-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR785UCD_ChIP_ZNF8_MCF-7_ENCSR311BIU_counts_pattern_4.n_81-vs-ZNF8-201.alignment counts-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR785UCD_ChIP_ZNF8_MCF-7_ENCSR311BIU_counts_pattern_5.n_71-vs-ZNF8-201.alignment counts-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR785UCD_ChIP_ZNF8_MCF-7_ENCSR311BIU_counts_pattern_6.n_21-vs-ZNF8-201.alignment counts-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR785UCD_ChIP_ZNF8_MCF-7_ENCSR311BIU_counts_pattern_7.n_20-vs-ZNF8-201.alignment counts-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF823-201/ChipExo_models_ZNF823_counts-pos.pattern_0.n_1084-vs-ZNF823-201.alignment counts-znf_b1h_alignment/ZNF823-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF823-201/ChipExo_models_ZNF823_counts-pos.pattern_1.n_401-vs-ZNF823-201.alignment counts-znf_b1h_alignment/ZNF823-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF823-201/ChipExo_models_ZNF823_counts-pos.pattern_2.n_356-vs-ZNF823-201.alignment counts-znf_b1h_alignment/ZNF823-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF823-201/ChipExo_models_ZNF823_counts-pos.pattern_3.n_239-vs-ZNF823-201.alignment counts-znf_b1h_alignment/ZNF823-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF823-201/ChipExo_models_ZNF823_counts-pos.pattern_4.n_211-vs-ZNF823-201.alignment counts-znf_b1h_alignment/ZNF823-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF823-201/ChipExo_models_ZNF823_counts-pos.pattern_5.n_191-vs-ZNF823-201.alignment counts-znf_b1h_alignment/ZNF823-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF823-201/ChipExo_models_ZNF823_counts-pos.pattern_6.n_84-vs-ZNF823-201.alignment counts-znf_b1h_alignment/ZNF823-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF823-201/ChipExo_models_ZNF823_counts-pos.pattern_7.n_33-vs-ZNF823-201.alignment counts-znf_b1h_alignment/ZNF823-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF823-201/ChipExo_models_ZNF823_counts-pos.pattern_8.n_29-vs-ZNF823-201.alignment counts-znf_b1h_alignment/ZNF823-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-201/neg_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_0.n_172-vs-ZNF827-201.alignment counts-znf_b1h_alignment/ZNF827-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-201/neg_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_1.n_69-vs-ZNF827-201.alignment counts-znf_b1h_alignment/ZNF827-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-201/neg_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_2.n_47-vs-ZNF827-201.alignment counts-znf_b1h_alignment/ZNF827-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-201/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_0.n_1469-vs-ZNF827-201.alignment counts-znf_b1h_alignment/ZNF827-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-201/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_10.n_168-vs-ZNF827-201.alignment counts-znf_b1h_alignment/ZNF827-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-201/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_11.n_165-vs-ZNF827-201.alignment counts-znf_b1h_alignment/ZNF827-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-201/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_12.n_159-vs-ZNF827-201.alignment counts-znf_b1h_alignment/ZNF827-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-201/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_13.n_159-vs-ZNF827-201.alignment counts-znf_b1h_alignment/ZNF827-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-201/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_14.n_158-vs-ZNF827-201.alignment counts-znf_b1h_alignment/ZNF827-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-201/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_15.n_143-vs-ZNF827-201.alignment counts-znf_b1h_alignment/ZNF827-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-201/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_16.n_135-vs-ZNF827-201.alignment counts-znf_b1h_alignment/ZNF827-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-201/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_17.n_116-vs-ZNF827-201.alignment counts-znf_b1h_alignment/ZNF827-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-201/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_18.n_112-vs-ZNF827-201.alignment counts-znf_b1h_alignment/ZNF827-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-201/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_19.n_101-vs-ZNF827-201.alignment counts-znf_b1h_alignment/ZNF827-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-201/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_1.n_1351-vs-ZNF827-201.alignment counts-znf_b1h_alignment/ZNF827-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-201/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_20.n_92-vs-ZNF827-201.alignment counts-znf_b1h_alignment/ZNF827-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-201/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_21.n_39-vs-ZNF827-201.alignment counts-znf_b1h_alignment/ZNF827-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-201/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_2.n_1008-vs-ZNF827-201.alignment counts-znf_b1h_alignment/ZNF827-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-201/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_3.n_416-vs-ZNF827-201.alignment counts-znf_b1h_alignment/ZNF827-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-201/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_4.n_228-vs-ZNF827-201.alignment counts-znf_b1h_alignment/ZNF827-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-201/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_5.n_221-vs-ZNF827-201.alignment counts-znf_b1h_alignment/ZNF827-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-201/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_6.n_210-vs-ZNF827-201.alignment counts-znf_b1h_alignment/ZNF827-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-201/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_7.n_207-vs-ZNF827-201.alignment counts-znf_b1h_alignment/ZNF827-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-201/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_8.n_206-vs-ZNF827-201.alignment counts-znf_b1h_alignment/ZNF827-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-201/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_9.n_168-vs-ZNF827-201.alignment counts-znf_b1h_alignment/ZNF827-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-204/neg_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_0.n_172-vs-ZNF827-204.alignment counts-znf_b1h_alignment/ZNF827-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-204/neg_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_1.n_69-vs-ZNF827-204.alignment counts-znf_b1h_alignment/ZNF827-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-204/neg_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_2.n_47-vs-ZNF827-204.alignment counts-znf_b1h_alignment/ZNF827-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-204/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_0.n_1469-vs-ZNF827-204.alignment counts-znf_b1h_alignment/ZNF827-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-204/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_10.n_168-vs-ZNF827-204.alignment counts-znf_b1h_alignment/ZNF827-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-204/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_11.n_165-vs-ZNF827-204.alignment counts-znf_b1h_alignment/ZNF827-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-204/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_12.n_159-vs-ZNF827-204.alignment counts-znf_b1h_alignment/ZNF827-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-204/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_13.n_159-vs-ZNF827-204.alignment counts-znf_b1h_alignment/ZNF827-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-204/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_14.n_158-vs-ZNF827-204.alignment counts-znf_b1h_alignment/ZNF827-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-204/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_15.n_143-vs-ZNF827-204.alignment counts-znf_b1h_alignment/ZNF827-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-204/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_16.n_135-vs-ZNF827-204.alignment counts-znf_b1h_alignment/ZNF827-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-204/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_17.n_116-vs-ZNF827-204.alignment counts-znf_b1h_alignment/ZNF827-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-204/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_18.n_112-vs-ZNF827-204.alignment counts-znf_b1h_alignment/ZNF827-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-204/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_19.n_101-vs-ZNF827-204.alignment counts-znf_b1h_alignment/ZNF827-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-204/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_1.n_1351-vs-ZNF827-204.alignment counts-znf_b1h_alignment/ZNF827-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-204/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_20.n_92-vs-ZNF827-204.alignment counts-znf_b1h_alignment/ZNF827-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-204/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_21.n_39-vs-ZNF827-204.alignment counts-znf_b1h_alignment/ZNF827-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-204/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_2.n_1008-vs-ZNF827-204.alignment counts-znf_b1h_alignment/ZNF827-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-204/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_3.n_416-vs-ZNF827-204.alignment counts-znf_b1h_alignment/ZNF827-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-204/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_4.n_228-vs-ZNF827-204.alignment counts-znf_b1h_alignment/ZNF827-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-204/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_5.n_221-vs-ZNF827-204.alignment counts-znf_b1h_alignment/ZNF827-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-204/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_6.n_210-vs-ZNF827-204.alignment counts-znf_b1h_alignment/ZNF827-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-204/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_7.n_207-vs-ZNF827-204.alignment counts-znf_b1h_alignment/ZNF827-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-204/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_8.n_206-vs-ZNF827-204.alignment counts-znf_b1h_alignment/ZNF827-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-204/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_9.n_168-vs-ZNF827-204.alignment counts-znf_b1h_alignment/ZNF827-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-207/neg_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_0.n_172-vs-ZNF827-207.alignment counts-znf_b1h_alignment/ZNF827-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-207/neg_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_1.n_69-vs-ZNF827-207.alignment counts-znf_b1h_alignment/ZNF827-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-207/neg_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_2.n_47-vs-ZNF827-207.alignment counts-znf_b1h_alignment/ZNF827-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-207/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_0.n_1469-vs-ZNF827-207.alignment counts-znf_b1h_alignment/ZNF827-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-207/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_10.n_168-vs-ZNF827-207.alignment counts-znf_b1h_alignment/ZNF827-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-207/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_11.n_165-vs-ZNF827-207.alignment counts-znf_b1h_alignment/ZNF827-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-207/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_12.n_159-vs-ZNF827-207.alignment counts-znf_b1h_alignment/ZNF827-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-207/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_13.n_159-vs-ZNF827-207.alignment counts-znf_b1h_alignment/ZNF827-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-207/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_14.n_158-vs-ZNF827-207.alignment counts-znf_b1h_alignment/ZNF827-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-207/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_15.n_143-vs-ZNF827-207.alignment counts-znf_b1h_alignment/ZNF827-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-207/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_16.n_135-vs-ZNF827-207.alignment counts-znf_b1h_alignment/ZNF827-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-207/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_17.n_116-vs-ZNF827-207.alignment counts-znf_b1h_alignment/ZNF827-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-207/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_18.n_112-vs-ZNF827-207.alignment counts-znf_b1h_alignment/ZNF827-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-207/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_19.n_101-vs-ZNF827-207.alignment counts-znf_b1h_alignment/ZNF827-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-207/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_1.n_1351-vs-ZNF827-207.alignment counts-znf_b1h_alignment/ZNF827-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-207/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_20.n_92-vs-ZNF827-207.alignment counts-znf_b1h_alignment/ZNF827-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-207/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_21.n_39-vs-ZNF827-207.alignment counts-znf_b1h_alignment/ZNF827-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-207/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_2.n_1008-vs-ZNF827-207.alignment counts-znf_b1h_alignment/ZNF827-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-207/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_3.n_416-vs-ZNF827-207.alignment counts-znf_b1h_alignment/ZNF827-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-207/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_4.n_228-vs-ZNF827-207.alignment counts-znf_b1h_alignment/ZNF827-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-207/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_5.n_221-vs-ZNF827-207.alignment counts-znf_b1h_alignment/ZNF827-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-207/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_6.n_210-vs-ZNF827-207.alignment counts-znf_b1h_alignment/ZNF827-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-207/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_7.n_207-vs-ZNF827-207.alignment counts-znf_b1h_alignment/ZNF827-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-207/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_8.n_206-vs-ZNF827-207.alignment counts-znf_b1h_alignment/ZNF827-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF827-207/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_counts_pattern_9.n_168-vs-ZNF827-207.alignment counts-znf_b1h_alignment/ZNF827-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF83-201/neg_patterns.ENCSR263XFO_ChIP_ZNF83_HepG2_ENCSR806NGY_counts_pattern_0.n_53-vs-ZNF83-201.alignment counts-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF83-201/neg_patterns.ENCSR263XFO_ChIP_ZNF83_HepG2_ENCSR806NGY_counts_pattern_1.n_33-vs-ZNF83-201.alignment counts-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF83-201/neg_patterns.ENCSR263XFO_ChIP_ZNF83_HepG2_ENCSR806NGY_counts_pattern_2.n_21-vs-ZNF83-201.alignment counts-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR257XVY_ChIP_ZNF83_K562_ENCSR832DWY_counts_pattern_0.n_2841-vs-ZNF83-201.alignment counts-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR257XVY_ChIP_ZNF83_K562_ENCSR832DWY_counts_pattern_10.n_49-vs-ZNF83-201.alignment counts-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR257XVY_ChIP_ZNF83_K562_ENCSR832DWY_counts_pattern_11.n_31-vs-ZNF83-201.alignment counts-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR257XVY_ChIP_ZNF83_K562_ENCSR832DWY_counts_pattern_1.n_925-vs-ZNF83-201.alignment counts-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR257XVY_ChIP_ZNF83_K562_ENCSR832DWY_counts_pattern_2.n_678-vs-ZNF83-201.alignment counts-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR257XVY_ChIP_ZNF83_K562_ENCSR832DWY_counts_pattern_3.n_651-vs-ZNF83-201.alignment counts-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR257XVY_ChIP_ZNF83_K562_ENCSR832DWY_counts_pattern_4.n_629-vs-ZNF83-201.alignment counts-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR257XVY_ChIP_ZNF83_K562_ENCSR832DWY_counts_pattern_5.n_578-vs-ZNF83-201.alignment counts-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR257XVY_ChIP_ZNF83_K562_ENCSR832DWY_counts_pattern_6.n_295-vs-ZNF83-201.alignment counts-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR257XVY_ChIP_ZNF83_K562_ENCSR832DWY_counts_pattern_7.n_241-vs-ZNF83-201.alignment counts-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR257XVY_ChIP_ZNF83_K562_ENCSR832DWY_counts_pattern_8.n_89-vs-ZNF83-201.alignment counts-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR257XVY_ChIP_ZNF83_K562_ENCSR832DWY_counts_pattern_9.n_78-vs-ZNF83-201.alignment counts-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR263XFO_ChIP_ZNF83_HepG2_ENCSR806NGY_counts_pattern_0.n_2131-vs-ZNF83-201.alignment counts-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR263XFO_ChIP_ZNF83_HepG2_ENCSR806NGY_counts_pattern_10.n_47-vs-ZNF83-201.alignment counts-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR263XFO_ChIP_ZNF83_HepG2_ENCSR806NGY_counts_pattern_11.n_35-vs-ZNF83-201.alignment counts-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR263XFO_ChIP_ZNF83_HepG2_ENCSR806NGY_counts_pattern_12.n_31-vs-ZNF83-201.alignment counts-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR263XFO_ChIP_ZNF83_HepG2_ENCSR806NGY_counts_pattern_13.n_27-vs-ZNF83-201.alignment counts-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR263XFO_ChIP_ZNF83_HepG2_ENCSR806NGY_counts_pattern_1.n_1554-vs-ZNF83-201.alignment counts-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR263XFO_ChIP_ZNF83_HepG2_ENCSR806NGY_counts_pattern_2.n_926-vs-ZNF83-201.alignment counts-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR263XFO_ChIP_ZNF83_HepG2_ENCSR806NGY_counts_pattern_3.n_744-vs-ZNF83-201.alignment counts-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR263XFO_ChIP_ZNF83_HepG2_ENCSR806NGY_counts_pattern_4.n_204-vs-ZNF83-201.alignment counts-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR263XFO_ChIP_ZNF83_HepG2_ENCSR806NGY_counts_pattern_5.n_92-vs-ZNF83-201.alignment counts-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR263XFO_ChIP_ZNF83_HepG2_ENCSR806NGY_counts_pattern_6.n_85-vs-ZNF83-201.alignment counts-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR263XFO_ChIP_ZNF83_HepG2_ENCSR806NGY_counts_pattern_7.n_84-vs-ZNF83-201.alignment counts-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR263XFO_ChIP_ZNF83_HepG2_ENCSR806NGY_counts_pattern_8.n_68-vs-ZNF83-201.alignment counts-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR263XFO_ChIP_ZNF83_HepG2_ENCSR806NGY_counts_pattern_9.n_65-vs-ZNF83-201.alignment counts-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF837-201/pos_patterns.ENCSR711UOA_ChIP_ZNF837_HEK293_ENCSR948EZY_counts_pattern_0.n_406-vs-ZNF837-201.alignment counts-znf_b1h_alignment/ZNF837-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF837-201/pos_patterns.ENCSR711UOA_ChIP_ZNF837_HEK293_ENCSR948EZY_counts_pattern_1.n_294-vs-ZNF837-201.alignment counts-znf_b1h_alignment/ZNF837-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF837-201/pos_patterns.ENCSR711UOA_ChIP_ZNF837_HEK293_ENCSR948EZY_counts_pattern_2.n_200-vs-ZNF837-201.alignment counts-znf_b1h_alignment/ZNF837-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF837-201/pos_patterns.ENCSR711UOA_ChIP_ZNF837_HEK293_ENCSR948EZY_counts_pattern_3.n_104-vs-ZNF837-201.alignment counts-znf_b1h_alignment/ZNF837-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF837-201/pos_patterns.ENCSR711UOA_ChIP_ZNF837_HEK293_ENCSR948EZY_counts_pattern_4.n_35-vs-ZNF837-201.alignment counts-znf_b1h_alignment/ZNF837-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF837-201/pos_patterns.ENCSR711UOA_ChIP_ZNF837_HEK293_ENCSR948EZY_counts_pattern_5.n_27-vs-ZNF837-201.alignment counts-znf_b1h_alignment/ZNF837-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF837-201/pos_patterns.ENCSR711UOA_ChIP_ZNF837_HEK293_ENCSR948EZY_counts_pattern_6.n_20-vs-ZNF837-201.alignment counts-znf_b1h_alignment/ZNF837-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF839-202/neg_patterns.ENCSR540LPD_ChIP_ZNF839_HepG2_ENCSR897NXV_counts_pattern_0.n_153-vs-ZNF839-202.alignment counts-znf_b1h_alignment/ZNF839-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF839-202/neg_patterns.ENCSR540LPD_ChIP_ZNF839_HepG2_ENCSR897NXV_counts_pattern_1.n_120-vs-ZNF839-202.alignment counts-znf_b1h_alignment/ZNF839-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF839-202/neg_patterns.ENCSR540LPD_ChIP_ZNF839_HepG2_ENCSR897NXV_counts_pattern_2.n_61-vs-ZNF839-202.alignment counts-znf_b1h_alignment/ZNF839-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF839-202/neg_patterns.ENCSR540LPD_ChIP_ZNF839_HepG2_ENCSR897NXV_counts_pattern_3.n_48-vs-ZNF839-202.alignment counts-znf_b1h_alignment/ZNF839-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF839-202/neg_patterns.ENCSR540LPD_ChIP_ZNF839_HepG2_ENCSR897NXV_counts_pattern_4.n_44-vs-ZNF839-202.alignment counts-znf_b1h_alignment/ZNF839-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF839-202/neg_patterns.ENCSR540LPD_ChIP_ZNF839_HepG2_ENCSR897NXV_counts_pattern_5.n_31-vs-ZNF839-202.alignment counts-znf_b1h_alignment/ZNF839-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF839-202/neg_patterns.ENCSR540LPD_ChIP_ZNF839_HepG2_ENCSR897NXV_counts_pattern_6.n_24-vs-ZNF839-202.alignment counts-znf_b1h_alignment/ZNF839-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF839-202/pos_patterns.ENCSR540LPD_ChIP_ZNF839_HepG2_ENCSR897NXV_counts_pattern_0.n_4450-vs-ZNF839-202.alignment counts-znf_b1h_alignment/ZNF839-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF839-202/pos_patterns.ENCSR540LPD_ChIP_ZNF839_HepG2_ENCSR897NXV_counts_pattern_1.n_1275-vs-ZNF839-202.alignment counts-znf_b1h_alignment/ZNF839-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF839-202/pos_patterns.ENCSR540LPD_ChIP_ZNF839_HepG2_ENCSR897NXV_counts_pattern_2.n_256-vs-ZNF839-202.alignment counts-znf_b1h_alignment/ZNF839-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF839-202/pos_patterns.ENCSR540LPD_ChIP_ZNF839_HepG2_ENCSR897NXV_counts_pattern_3.n_72-vs-ZNF839-202.alignment counts-znf_b1h_alignment/ZNF839-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF839-202/pos_patterns.ENCSR540LPD_ChIP_ZNF839_HepG2_ENCSR897NXV_counts_pattern_4.n_56-vs-ZNF839-202.alignment counts-znf_b1h_alignment/ZNF839-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF84-201/ChipExo_models_ZNF84_counts-pos.pattern_0.n_5680-vs-ZNF84-201.alignment counts-znf_b1h_alignment/ZNF84-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF84-201/ChipExo_models_ZNF84_counts-pos.pattern_1.n_60-vs-ZNF84-201.alignment counts-znf_b1h_alignment/ZNF84-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF84-201/ChipExo_models_ZNF84_counts-pos.pattern_2.n_48-vs-ZNF84-201.alignment counts-znf_b1h_alignment/ZNF84-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF84-201/pos_patterns.ENCSR376UMR_ChIP_ZNF84_K562_ENCSR301TKB_counts_pattern_0.n_704-vs-ZNF84-201.alignment counts-znf_b1h_alignment/ZNF84-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF84-201/pos_patterns.ENCSR376UMR_ChIP_ZNF84_K562_ENCSR301TKB_counts_pattern_1.n_77-vs-ZNF84-201.alignment counts-znf_b1h_alignment/ZNF84-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF84-201/pos_patterns.ENCSR376UMR_ChIP_ZNF84_K562_ENCSR301TKB_counts_pattern_2.n_68-vs-ZNF84-201.alignment counts-znf_b1h_alignment/ZNF84-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF84-201/pos_patterns.ENCSR376UMR_ChIP_ZNF84_K562_ENCSR301TKB_counts_pattern_3.n_63-vs-ZNF84-201.alignment counts-znf_b1h_alignment/ZNF84-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF84-201/pos_patterns.ENCSR376UMR_ChIP_ZNF84_K562_ENCSR301TKB_counts_pattern_4.n_61-vs-ZNF84-201.alignment counts-znf_b1h_alignment/ZNF84-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF84-201/pos_patterns.ENCSR376UMR_ChIP_ZNF84_K562_ENCSR301TKB_counts_pattern_5.n_50-vs-ZNF84-201.alignment counts-znf_b1h_alignment/ZNF84-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF84-201/pos_patterns.ENCSR376UMR_ChIP_ZNF84_K562_ENCSR301TKB_counts_pattern_6.n_48-vs-ZNF84-201.alignment counts-znf_b1h_alignment/ZNF84-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF84-201/pos_patterns.ENCSR376UMR_ChIP_ZNF84_K562_ENCSR301TKB_counts_pattern_7.n_27-vs-ZNF84-201.alignment counts-znf_b1h_alignment/ZNF84-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF84-201/pos_patterns.ENCSR376UMR_ChIP_ZNF84_K562_ENCSR301TKB_counts_pattern_8.n_24-vs-ZNF84-201.alignment counts-znf_b1h_alignment/ZNF84-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF843-201/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_counts_pattern_0.n_7649-vs-ZNF843-201.alignment counts-znf_b1h_alignment/ZNF843-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF843-201/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_counts_pattern_10.n_55-vs-ZNF843-201.alignment counts-znf_b1h_alignment/ZNF843-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF843-201/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_counts_pattern_11.n_53-vs-ZNF843-201.alignment counts-znf_b1h_alignment/ZNF843-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF843-201/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_counts_pattern_12.n_29-vs-ZNF843-201.alignment counts-znf_b1h_alignment/ZNF843-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF843-201/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_counts_pattern_13.n_29-vs-ZNF843-201.alignment counts-znf_b1h_alignment/ZNF843-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF843-201/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_counts_pattern_14.n_27-vs-ZNF843-201.alignment counts-znf_b1h_alignment/ZNF843-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF843-201/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_counts_pattern_15.n_23-vs-ZNF843-201.alignment counts-znf_b1h_alignment/ZNF843-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF843-201/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_counts_pattern_16.n_20-vs-ZNF843-201.alignment counts-znf_b1h_alignment/ZNF843-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF843-201/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_counts_pattern_1.n_1877-vs-ZNF843-201.alignment counts-znf_b1h_alignment/ZNF843-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF843-201/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_counts_pattern_2.n_1600-vs-ZNF843-201.alignment counts-znf_b1h_alignment/ZNF843-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF843-201/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_counts_pattern_3.n_1406-vs-ZNF843-201.alignment counts-znf_b1h_alignment/ZNF843-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF843-201/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_counts_pattern_4.n_926-vs-ZNF843-201.alignment counts-znf_b1h_alignment/ZNF843-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF843-201/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_counts_pattern_5.n_790-vs-ZNF843-201.alignment counts-znf_b1h_alignment/ZNF843-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF843-201/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_counts_pattern_6.n_541-vs-ZNF843-201.alignment counts-znf_b1h_alignment/ZNF843-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF843-201/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_counts_pattern_7.n_191-vs-ZNF843-201.alignment counts-znf_b1h_alignment/ZNF843-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF843-201/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_counts_pattern_8.n_161-vs-ZNF843-201.alignment counts-znf_b1h_alignment/ZNF843-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF843-201/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_counts_pattern_9.n_77-vs-ZNF843-201.alignment counts-znf_b1h_alignment/ZNF843-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF843-202/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_counts_pattern_0.n_7649-vs-ZNF843-202.alignment counts-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF843-202/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_counts_pattern_10.n_55-vs-ZNF843-202.alignment counts-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF843-202/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_counts_pattern_11.n_53-vs-ZNF843-202.alignment counts-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF843-202/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_counts_pattern_12.n_29-vs-ZNF843-202.alignment counts-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF843-202/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_counts_pattern_13.n_29-vs-ZNF843-202.alignment counts-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF843-202/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_counts_pattern_14.n_27-vs-ZNF843-202.alignment counts-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF843-202/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_counts_pattern_15.n_23-vs-ZNF843-202.alignment counts-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF843-202/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_counts_pattern_16.n_20-vs-ZNF843-202.alignment counts-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF843-202/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_counts_pattern_1.n_1877-vs-ZNF843-202.alignment counts-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF843-202/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_counts_pattern_2.n_1600-vs-ZNF843-202.alignment counts-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF843-202/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_counts_pattern_3.n_1406-vs-ZNF843-202.alignment counts-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF843-202/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_counts_pattern_4.n_926-vs-ZNF843-202.alignment counts-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF843-202/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_counts_pattern_5.n_790-vs-ZNF843-202.alignment counts-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF843-202/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_counts_pattern_6.n_541-vs-ZNF843-202.alignment counts-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF843-202/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_counts_pattern_7.n_191-vs-ZNF843-202.alignment counts-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF843-202/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_counts_pattern_8.n_161-vs-ZNF843-202.alignment counts-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF843-202/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_counts_pattern_9.n_77-vs-ZNF843-202.alignment counts-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF846-205/ChipExo_models_ZNF846_counts-pos.pattern_0.n_794-vs-ZNF846-205.alignment counts-znf_b1h_alignment/ZNF846-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF846-205/ChipExo_models_ZNF846_counts-pos.pattern_1.n_737-vs-ZNF846-205.alignment counts-znf_b1h_alignment/ZNF846-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF846-205/ChipExo_models_ZNF846_counts-pos.pattern_2.n_684-vs-ZNF846-205.alignment counts-znf_b1h_alignment/ZNF846-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF846-205/ChipExo_models_ZNF846_counts-pos.pattern_3.n_434-vs-ZNF846-205.alignment counts-znf_b1h_alignment/ZNF846-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF846-205/ChipExo_models_ZNF846_counts-pos.pattern_4.n_35-vs-ZNF846-205.alignment counts-znf_b1h_alignment/ZNF846-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF846-205/ChipExo_models_ZNF846_counts-pos.pattern_5.n_30-vs-ZNF846-205.alignment counts-znf_b1h_alignment/ZNF846-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF846-205/ChipExo_models_ZNF846_counts-pos.pattern_6.n_23-vs-ZNF846-205.alignment counts-znf_b1h_alignment/ZNF846-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF850-202/pos_patterns.ENCSR756CJS_ChIP_ZNF850_HepG2_ENCSR265DEM_counts_pattern_0.n_547-vs-ZNF850-202.alignment counts-znf_b1h_alignment/ZNF850-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF850-202/pos_patterns.ENCSR756CJS_ChIP_ZNF850_HepG2_ENCSR265DEM_counts_pattern_10.n_24-vs-ZNF850-202.alignment counts-znf_b1h_alignment/ZNF850-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF850-202/pos_patterns.ENCSR756CJS_ChIP_ZNF850_HepG2_ENCSR265DEM_counts_pattern_1.n_408-vs-ZNF850-202.alignment counts-znf_b1h_alignment/ZNF850-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF850-202/pos_patterns.ENCSR756CJS_ChIP_ZNF850_HepG2_ENCSR265DEM_counts_pattern_2.n_288-vs-ZNF850-202.alignment counts-znf_b1h_alignment/ZNF850-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF850-202/pos_patterns.ENCSR756CJS_ChIP_ZNF850_HepG2_ENCSR265DEM_counts_pattern_3.n_141-vs-ZNF850-202.alignment counts-znf_b1h_alignment/ZNF850-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF850-202/pos_patterns.ENCSR756CJS_ChIP_ZNF850_HepG2_ENCSR265DEM_counts_pattern_4.n_77-vs-ZNF850-202.alignment counts-znf_b1h_alignment/ZNF850-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF850-202/pos_patterns.ENCSR756CJS_ChIP_ZNF850_HepG2_ENCSR265DEM_counts_pattern_5.n_66-vs-ZNF850-202.alignment counts-znf_b1h_alignment/ZNF850-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF850-202/pos_patterns.ENCSR756CJS_ChIP_ZNF850_HepG2_ENCSR265DEM_counts_pattern_6.n_64-vs-ZNF850-202.alignment counts-znf_b1h_alignment/ZNF850-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF850-202/pos_patterns.ENCSR756CJS_ChIP_ZNF850_HepG2_ENCSR265DEM_counts_pattern_7.n_50-vs-ZNF850-202.alignment counts-znf_b1h_alignment/ZNF850-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF850-202/pos_patterns.ENCSR756CJS_ChIP_ZNF850_HepG2_ENCSR265DEM_counts_pattern_8.n_41-vs-ZNF850-202.alignment counts-znf_b1h_alignment/ZNF850-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF850-202/pos_patterns.ENCSR756CJS_ChIP_ZNF850_HepG2_ENCSR265DEM_counts_pattern_9.n_33-vs-ZNF850-202.alignment counts-znf_b1h_alignment/ZNF850-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF85-202/ChipExo_models_ZNF85_counts-pos.pattern_0.n_159-vs-ZNF85-202.alignment counts-znf_b1h_alignment/ZNF85-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF85-202/ChipExo_models_ZNF85_counts-pos.pattern_1.n_32-vs-ZNF85-202.alignment counts-znf_b1h_alignment/ZNF85-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF85-202/Hughes_GR_models_ZNF85_counts-pos.pattern_0.n_678-vs-ZNF85-202.alignment counts-znf_b1h_alignment/ZNF85-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF85-202/Hughes_GR_models_ZNF85_counts-pos.pattern_1.n_24-vs-ZNF85-202.alignment counts-znf_b1h_alignment/ZNF85-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF860-201/ChipExo_models_ZNF860_counts-pos.pattern_0.n_211-vs-ZNF860-201.alignment counts-znf_b1h_alignment/ZNF860-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF860-201/ChipExo_models_ZNF860_counts-pos.pattern_1.n_130-vs-ZNF860-201.alignment counts-znf_b1h_alignment/ZNF860-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF860-201/ChipExo_models_ZNF860_counts-pos.pattern_2.n_77-vs-ZNF860-201.alignment counts-znf_b1h_alignment/ZNF860-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF860-201/ChipExo_models_ZNF860_counts-pos.pattern_3.n_37-vs-ZNF860-201.alignment counts-znf_b1h_alignment/ZNF860-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF860-201/ChipExo_models_ZNF860_counts-pos.pattern_4.n_30-vs-ZNF860-201.alignment counts-znf_b1h_alignment/ZNF860-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF865-201/pos_patterns.ENCSR891KPP_ChIP_ZNF865_HepG2_ENCSR144JWD_counts_pattern_0.n_11951-vs-ZNF865-201.alignment counts-znf_b1h_alignment/ZNF865-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF865-201/pos_patterns.ENCSR891KPP_ChIP_ZNF865_HepG2_ENCSR144JWD_counts_pattern_10.n_31-vs-ZNF865-201.alignment counts-znf_b1h_alignment/ZNF865-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF865-201/pos_patterns.ENCSR891KPP_ChIP_ZNF865_HepG2_ENCSR144JWD_counts_pattern_11.n_23-vs-ZNF865-201.alignment counts-znf_b1h_alignment/ZNF865-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF865-201/pos_patterns.ENCSR891KPP_ChIP_ZNF865_HepG2_ENCSR144JWD_counts_pattern_1.n_1658-vs-ZNF865-201.alignment counts-znf_b1h_alignment/ZNF865-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF865-201/pos_patterns.ENCSR891KPP_ChIP_ZNF865_HepG2_ENCSR144JWD_counts_pattern_2.n_667-vs-ZNF865-201.alignment counts-znf_b1h_alignment/ZNF865-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF865-201/pos_patterns.ENCSR891KPP_ChIP_ZNF865_HepG2_ENCSR144JWD_counts_pattern_3.n_595-vs-ZNF865-201.alignment counts-znf_b1h_alignment/ZNF865-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF865-201/pos_patterns.ENCSR891KPP_ChIP_ZNF865_HepG2_ENCSR144JWD_counts_pattern_4.n_354-vs-ZNF865-201.alignment counts-znf_b1h_alignment/ZNF865-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF865-201/pos_patterns.ENCSR891KPP_ChIP_ZNF865_HepG2_ENCSR144JWD_counts_pattern_5.n_144-vs-ZNF865-201.alignment counts-znf_b1h_alignment/ZNF865-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF865-201/pos_patterns.ENCSR891KPP_ChIP_ZNF865_HepG2_ENCSR144JWD_counts_pattern_6.n_127-vs-ZNF865-201.alignment counts-znf_b1h_alignment/ZNF865-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF865-201/pos_patterns.ENCSR891KPP_ChIP_ZNF865_HepG2_ENCSR144JWD_counts_pattern_7.n_107-vs-ZNF865-201.alignment counts-znf_b1h_alignment/ZNF865-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF865-201/pos_patterns.ENCSR891KPP_ChIP_ZNF865_HepG2_ENCSR144JWD_counts_pattern_8.n_53-vs-ZNF865-201.alignment counts-znf_b1h_alignment/ZNF865-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF865-201/pos_patterns.ENCSR891KPP_ChIP_ZNF865_HepG2_ENCSR144JWD_counts_pattern_9.n_36-vs-ZNF865-201.alignment counts-znf_b1h_alignment/ZNF865-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF879-201/ChipExo_models_ZNF879_counts-neg.pattern_0.n_45-vs-ZNF879-201.alignment counts-znf_b1h_alignment/ZNF879-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF879-201/ChipExo_models_ZNF879_counts-neg.pattern_1.n_37-vs-ZNF879-201.alignment counts-znf_b1h_alignment/ZNF879-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF879-201/ChipExo_models_ZNF879_counts-neg.pattern_2.n_24-vs-ZNF879-201.alignment counts-znf_b1h_alignment/ZNF879-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF879-201/ChipExo_models_ZNF879_counts-pos.pattern_0.n_674-vs-ZNF879-201.alignment counts-znf_b1h_alignment/ZNF879-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF879-201/ChipExo_models_ZNF879_counts-pos.pattern_1.n_290-vs-ZNF879-201.alignment counts-znf_b1h_alignment/ZNF879-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF879-201/ChipExo_models_ZNF879_counts-pos.pattern_2.n_59-vs-ZNF879-201.alignment counts-znf_b1h_alignment/ZNF879-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF879-201/ChipExo_models_ZNF879_counts-pos.pattern_3.n_46-vs-ZNF879-201.alignment counts-znf_b1h_alignment/ZNF879-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF879-201/ChipExo_models_ZNF879_counts-pos.pattern_4.n_37-vs-ZNF879-201.alignment counts-znf_b1h_alignment/ZNF879-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF879-201/ChipExo_models_ZNF879_counts-pos.pattern_5.n_35-vs-ZNF879-201.alignment counts-znf_b1h_alignment/ZNF879-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF879-201/ChipExo_models_ZNF879_counts-pos.pattern_6.n_28-vs-ZNF879-201.alignment counts-znf_b1h_alignment/ZNF879-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF879-201/pos_patterns.ENCSR073OBD_ChIP_ZNF879_HepG2_ENCSR392GOG_counts_pattern_0.n_1180-vs-ZNF879-201.alignment counts-znf_b1h_alignment/ZNF879-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF879-201/pos_patterns.ENCSR073OBD_ChIP_ZNF879_HepG2_ENCSR392GOG_counts_pattern_10.n_203-vs-ZNF879-201.alignment counts-znf_b1h_alignment/ZNF879-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF879-201/pos_patterns.ENCSR073OBD_ChIP_ZNF879_HepG2_ENCSR392GOG_counts_pattern_11.n_174-vs-ZNF879-201.alignment counts-znf_b1h_alignment/ZNF879-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF879-201/pos_patterns.ENCSR073OBD_ChIP_ZNF879_HepG2_ENCSR392GOG_counts_pattern_12.n_171-vs-ZNF879-201.alignment counts-znf_b1h_alignment/ZNF879-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF879-201/pos_patterns.ENCSR073OBD_ChIP_ZNF879_HepG2_ENCSR392GOG_counts_pattern_13.n_84-vs-ZNF879-201.alignment counts-znf_b1h_alignment/ZNF879-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF879-201/pos_patterns.ENCSR073OBD_ChIP_ZNF879_HepG2_ENCSR392GOG_counts_pattern_14.n_71-vs-ZNF879-201.alignment counts-znf_b1h_alignment/ZNF879-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF879-201/pos_patterns.ENCSR073OBD_ChIP_ZNF879_HepG2_ENCSR392GOG_counts_pattern_15.n_64-vs-ZNF879-201.alignment counts-znf_b1h_alignment/ZNF879-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF879-201/pos_patterns.ENCSR073OBD_ChIP_ZNF879_HepG2_ENCSR392GOG_counts_pattern_16.n_60-vs-ZNF879-201.alignment counts-znf_b1h_alignment/ZNF879-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF879-201/pos_patterns.ENCSR073OBD_ChIP_ZNF879_HepG2_ENCSR392GOG_counts_pattern_17.n_55-vs-ZNF879-201.alignment counts-znf_b1h_alignment/ZNF879-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF879-201/pos_patterns.ENCSR073OBD_ChIP_ZNF879_HepG2_ENCSR392GOG_counts_pattern_18.n_40-vs-ZNF879-201.alignment counts-znf_b1h_alignment/ZNF879-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF879-201/pos_patterns.ENCSR073OBD_ChIP_ZNF879_HepG2_ENCSR392GOG_counts_pattern_19.n_34-vs-ZNF879-201.alignment counts-znf_b1h_alignment/ZNF879-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF879-201/pos_patterns.ENCSR073OBD_ChIP_ZNF879_HepG2_ENCSR392GOG_counts_pattern_1.n_824-vs-ZNF879-201.alignment counts-znf_b1h_alignment/ZNF879-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF879-201/pos_patterns.ENCSR073OBD_ChIP_ZNF879_HepG2_ENCSR392GOG_counts_pattern_20.n_25-vs-ZNF879-201.alignment counts-znf_b1h_alignment/ZNF879-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF879-201/pos_patterns.ENCSR073OBD_ChIP_ZNF879_HepG2_ENCSR392GOG_counts_pattern_21.n_20-vs-ZNF879-201.alignment counts-znf_b1h_alignment/ZNF879-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF879-201/pos_patterns.ENCSR073OBD_ChIP_ZNF879_HepG2_ENCSR392GOG_counts_pattern_2.n_801-vs-ZNF879-201.alignment counts-znf_b1h_alignment/ZNF879-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF879-201/pos_patterns.ENCSR073OBD_ChIP_ZNF879_HepG2_ENCSR392GOG_counts_pattern_3.n_583-vs-ZNF879-201.alignment counts-znf_b1h_alignment/ZNF879-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF879-201/pos_patterns.ENCSR073OBD_ChIP_ZNF879_HepG2_ENCSR392GOG_counts_pattern_4.n_552-vs-ZNF879-201.alignment counts-znf_b1h_alignment/ZNF879-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF879-201/pos_patterns.ENCSR073OBD_ChIP_ZNF879_HepG2_ENCSR392GOG_counts_pattern_5.n_432-vs-ZNF879-201.alignment counts-znf_b1h_alignment/ZNF879-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF879-201/pos_patterns.ENCSR073OBD_ChIP_ZNF879_HepG2_ENCSR392GOG_counts_pattern_6.n_306-vs-ZNF879-201.alignment counts-znf_b1h_alignment/ZNF879-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF879-201/pos_patterns.ENCSR073OBD_ChIP_ZNF879_HepG2_ENCSR392GOG_counts_pattern_7.n_285-vs-ZNF879-201.alignment counts-znf_b1h_alignment/ZNF879-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF879-201/pos_patterns.ENCSR073OBD_ChIP_ZNF879_HepG2_ENCSR392GOG_counts_pattern_8.n_206-vs-ZNF879-201.alignment counts-znf_b1h_alignment/ZNF879-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF879-201/pos_patterns.ENCSR073OBD_ChIP_ZNF879_HepG2_ENCSR392GOG_counts_pattern_9.n_206-vs-ZNF879-201.alignment counts-znf_b1h_alignment/ZNF879-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF880-202/ChipExo_models_ZNF880_counts-pos.pattern_0.n_177-vs-ZNF880-202.alignment counts-znf_b1h_alignment/ZNF880-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF880-202/ChipExo_models_ZNF880_counts-pos.pattern_1.n_25-vs-ZNF880-202.alignment counts-znf_b1h_alignment/ZNF880-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF883-205/neg_patterns.ENCSR882YYL_ChIP_ZNF883_HepG2_ENCSR497EAM_counts_pattern_0.n_93-vs-ZNF883-205.alignment counts-znf_b1h_alignment/ZNF883-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF883-205/neg_patterns.ENCSR882YYL_ChIP_ZNF883_HepG2_ENCSR497EAM_counts_pattern_1.n_66-vs-ZNF883-205.alignment counts-znf_b1h_alignment/ZNF883-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF883-205/neg_patterns.ENCSR882YYL_ChIP_ZNF883_HepG2_ENCSR497EAM_counts_pattern_2.n_61-vs-ZNF883-205.alignment counts-znf_b1h_alignment/ZNF883-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF883-205/neg_patterns.ENCSR882YYL_ChIP_ZNF883_HepG2_ENCSR497EAM_counts_pattern_3.n_47-vs-ZNF883-205.alignment counts-znf_b1h_alignment/ZNF883-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF883-205/neg_patterns.ENCSR882YYL_ChIP_ZNF883_HepG2_ENCSR497EAM_counts_pattern_4.n_41-vs-ZNF883-205.alignment counts-znf_b1h_alignment/ZNF883-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF883-205/neg_patterns.ENCSR882YYL_ChIP_ZNF883_HepG2_ENCSR497EAM_counts_pattern_5.n_40-vs-ZNF883-205.alignment counts-znf_b1h_alignment/ZNF883-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF883-205/neg_patterns.ENCSR882YYL_ChIP_ZNF883_HepG2_ENCSR497EAM_counts_pattern_6.n_36-vs-ZNF883-205.alignment counts-znf_b1h_alignment/ZNF883-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF883-205/neg_patterns.ENCSR882YYL_ChIP_ZNF883_HepG2_ENCSR497EAM_counts_pattern_7.n_34-vs-ZNF883-205.alignment counts-znf_b1h_alignment/ZNF883-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF883-205/neg_patterns.ENCSR882YYL_ChIP_ZNF883_HepG2_ENCSR497EAM_counts_pattern_8.n_28-vs-ZNF883-205.alignment counts-znf_b1h_alignment/ZNF883-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF883-205/pos_patterns.ENCSR882YYL_ChIP_ZNF883_HepG2_ENCSR497EAM_counts_pattern_0.n_4471-vs-ZNF883-205.alignment counts-znf_b1h_alignment/ZNF883-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF883-205/pos_patterns.ENCSR882YYL_ChIP_ZNF883_HepG2_ENCSR497EAM_counts_pattern_10.n_237-vs-ZNF883-205.alignment counts-znf_b1h_alignment/ZNF883-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF883-205/pos_patterns.ENCSR882YYL_ChIP_ZNF883_HepG2_ENCSR497EAM_counts_pattern_11.n_231-vs-ZNF883-205.alignment counts-znf_b1h_alignment/ZNF883-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF883-205/pos_patterns.ENCSR882YYL_ChIP_ZNF883_HepG2_ENCSR497EAM_counts_pattern_12.n_219-vs-ZNF883-205.alignment counts-znf_b1h_alignment/ZNF883-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF883-205/pos_patterns.ENCSR882YYL_ChIP_ZNF883_HepG2_ENCSR497EAM_counts_pattern_13.n_176-vs-ZNF883-205.alignment counts-znf_b1h_alignment/ZNF883-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF883-205/pos_patterns.ENCSR882YYL_ChIP_ZNF883_HepG2_ENCSR497EAM_counts_pattern_14.n_167-vs-ZNF883-205.alignment counts-znf_b1h_alignment/ZNF883-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF883-205/pos_patterns.ENCSR882YYL_ChIP_ZNF883_HepG2_ENCSR497EAM_counts_pattern_15.n_72-vs-ZNF883-205.alignment counts-znf_b1h_alignment/ZNF883-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF883-205/pos_patterns.ENCSR882YYL_ChIP_ZNF883_HepG2_ENCSR497EAM_counts_pattern_16.n_55-vs-ZNF883-205.alignment counts-znf_b1h_alignment/ZNF883-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF883-205/pos_patterns.ENCSR882YYL_ChIP_ZNF883_HepG2_ENCSR497EAM_counts_pattern_17.n_54-vs-ZNF883-205.alignment counts-znf_b1h_alignment/ZNF883-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF883-205/pos_patterns.ENCSR882YYL_ChIP_ZNF883_HepG2_ENCSR497EAM_counts_pattern_18.n_32-vs-ZNF883-205.alignment counts-znf_b1h_alignment/ZNF883-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF883-205/pos_patterns.ENCSR882YYL_ChIP_ZNF883_HepG2_ENCSR497EAM_counts_pattern_19.n_30-vs-ZNF883-205.alignment counts-znf_b1h_alignment/ZNF883-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF883-205/pos_patterns.ENCSR882YYL_ChIP_ZNF883_HepG2_ENCSR497EAM_counts_pattern_1.n_1565-vs-ZNF883-205.alignment counts-znf_b1h_alignment/ZNF883-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF883-205/pos_patterns.ENCSR882YYL_ChIP_ZNF883_HepG2_ENCSR497EAM_counts_pattern_2.n_1082-vs-ZNF883-205.alignment counts-znf_b1h_alignment/ZNF883-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF883-205/pos_patterns.ENCSR882YYL_ChIP_ZNF883_HepG2_ENCSR497EAM_counts_pattern_3.n_1081-vs-ZNF883-205.alignment counts-znf_b1h_alignment/ZNF883-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF883-205/pos_patterns.ENCSR882YYL_ChIP_ZNF883_HepG2_ENCSR497EAM_counts_pattern_4.n_1073-vs-ZNF883-205.alignment counts-znf_b1h_alignment/ZNF883-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF883-205/pos_patterns.ENCSR882YYL_ChIP_ZNF883_HepG2_ENCSR497EAM_counts_pattern_5.n_684-vs-ZNF883-205.alignment counts-znf_b1h_alignment/ZNF883-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF883-205/pos_patterns.ENCSR882YYL_ChIP_ZNF883_HepG2_ENCSR497EAM_counts_pattern_6.n_576-vs-ZNF883-205.alignment counts-znf_b1h_alignment/ZNF883-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF883-205/pos_patterns.ENCSR882YYL_ChIP_ZNF883_HepG2_ENCSR497EAM_counts_pattern_7.n_558-vs-ZNF883-205.alignment counts-znf_b1h_alignment/ZNF883-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF883-205/pos_patterns.ENCSR882YYL_ChIP_ZNF883_HepG2_ENCSR497EAM_counts_pattern_8.n_472-vs-ZNF883-205.alignment counts-znf_b1h_alignment/ZNF883-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF883-205/pos_patterns.ENCSR882YYL_ChIP_ZNF883_HepG2_ENCSR497EAM_counts_pattern_9.n_349-vs-ZNF883-205.alignment counts-znf_b1h_alignment/ZNF883-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF891-201/ChipExo_models_ZNF891_counts-pos.pattern_0.n_151-vs-ZNF891-201.alignment counts-znf_b1h_alignment/ZNF891-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF891-201/ChipExo_models_ZNF891_counts-pos.pattern_1.n_107-vs-ZNF891-201.alignment counts-znf_b1h_alignment/ZNF891-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF891-201/neg_patterns.ENCSR020CLV_ChIP_ZNF891_HepG2_ENCSR182TDX_counts_pattern_0.n_184-vs-ZNF891-201.alignment counts-znf_b1h_alignment/ZNF891-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF891-201/neg_patterns.ENCSR020CLV_ChIP_ZNF891_HepG2_ENCSR182TDX_counts_pattern_1.n_178-vs-ZNF891-201.alignment counts-znf_b1h_alignment/ZNF891-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF891-201/neg_patterns.ENCSR020CLV_ChIP_ZNF891_HepG2_ENCSR182TDX_counts_pattern_2.n_177-vs-ZNF891-201.alignment counts-znf_b1h_alignment/ZNF891-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF891-201/neg_patterns.ENCSR020CLV_ChIP_ZNF891_HepG2_ENCSR182TDX_counts_pattern_3.n_51-vs-ZNF891-201.alignment counts-znf_b1h_alignment/ZNF891-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF891-201/neg_patterns.ENCSR020CLV_ChIP_ZNF891_HepG2_ENCSR182TDX_counts_pattern_4.n_37-vs-ZNF891-201.alignment counts-znf_b1h_alignment/ZNF891-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF891-201/neg_patterns.ENCSR020CLV_ChIP_ZNF891_HepG2_ENCSR182TDX_counts_pattern_5.n_37-vs-ZNF891-201.alignment counts-znf_b1h_alignment/ZNF891-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF891-201/neg_patterns.ENCSR020CLV_ChIP_ZNF891_HepG2_ENCSR182TDX_counts_pattern_6.n_34-vs-ZNF891-201.alignment counts-znf_b1h_alignment/ZNF891-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF891-201/neg_patterns.ENCSR020CLV_ChIP_ZNF891_HepG2_ENCSR182TDX_counts_pattern_7.n_27-vs-ZNF891-201.alignment counts-znf_b1h_alignment/ZNF891-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF891-201/neg_patterns.ENCSR020CLV_ChIP_ZNF891_HepG2_ENCSR182TDX_counts_pattern_8.n_20-vs-ZNF891-201.alignment counts-znf_b1h_alignment/ZNF891-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF891-201/pos_patterns.ENCSR020CLV_ChIP_ZNF891_HepG2_ENCSR182TDX_counts_pattern_0.n_3487-vs-ZNF891-201.alignment counts-znf_b1h_alignment/ZNF891-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF891-201/pos_patterns.ENCSR020CLV_ChIP_ZNF891_HepG2_ENCSR182TDX_counts_pattern_10.n_262-vs-ZNF891-201.alignment counts-znf_b1h_alignment/ZNF891-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF891-201/pos_patterns.ENCSR020CLV_ChIP_ZNF891_HepG2_ENCSR182TDX_counts_pattern_11.n_238-vs-ZNF891-201.alignment counts-znf_b1h_alignment/ZNF891-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF891-201/pos_patterns.ENCSR020CLV_ChIP_ZNF891_HepG2_ENCSR182TDX_counts_pattern_12.n_187-vs-ZNF891-201.alignment counts-znf_b1h_alignment/ZNF891-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF891-201/pos_patterns.ENCSR020CLV_ChIP_ZNF891_HepG2_ENCSR182TDX_counts_pattern_13.n_161-vs-ZNF891-201.alignment counts-znf_b1h_alignment/ZNF891-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF891-201/pos_patterns.ENCSR020CLV_ChIP_ZNF891_HepG2_ENCSR182TDX_counts_pattern_14.n_69-vs-ZNF891-201.alignment counts-znf_b1h_alignment/ZNF891-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF891-201/pos_patterns.ENCSR020CLV_ChIP_ZNF891_HepG2_ENCSR182TDX_counts_pattern_15.n_61-vs-ZNF891-201.alignment counts-znf_b1h_alignment/ZNF891-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF891-201/pos_patterns.ENCSR020CLV_ChIP_ZNF891_HepG2_ENCSR182TDX_counts_pattern_16.n_53-vs-ZNF891-201.alignment counts-znf_b1h_alignment/ZNF891-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF891-201/pos_patterns.ENCSR020CLV_ChIP_ZNF891_HepG2_ENCSR182TDX_counts_pattern_17.n_40-vs-ZNF891-201.alignment counts-znf_b1h_alignment/ZNF891-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF891-201/pos_patterns.ENCSR020CLV_ChIP_ZNF891_HepG2_ENCSR182TDX_counts_pattern_18.n_38-vs-ZNF891-201.alignment counts-znf_b1h_alignment/ZNF891-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF891-201/pos_patterns.ENCSR020CLV_ChIP_ZNF891_HepG2_ENCSR182TDX_counts_pattern_1.n_1460-vs-ZNF891-201.alignment counts-znf_b1h_alignment/ZNF891-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF891-201/pos_patterns.ENCSR020CLV_ChIP_ZNF891_HepG2_ENCSR182TDX_counts_pattern_2.n_1182-vs-ZNF891-201.alignment counts-znf_b1h_alignment/ZNF891-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF891-201/pos_patterns.ENCSR020CLV_ChIP_ZNF891_HepG2_ENCSR182TDX_counts_pattern_3.n_757-vs-ZNF891-201.alignment counts-znf_b1h_alignment/ZNF891-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF891-201/pos_patterns.ENCSR020CLV_ChIP_ZNF891_HepG2_ENCSR182TDX_counts_pattern_4.n_643-vs-ZNF891-201.alignment counts-znf_b1h_alignment/ZNF891-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF891-201/pos_patterns.ENCSR020CLV_ChIP_ZNF891_HepG2_ENCSR182TDX_counts_pattern_5.n_625-vs-ZNF891-201.alignment counts-znf_b1h_alignment/ZNF891-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF891-201/pos_patterns.ENCSR020CLV_ChIP_ZNF891_HepG2_ENCSR182TDX_counts_pattern_6.n_412-vs-ZNF891-201.alignment counts-znf_b1h_alignment/ZNF891-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF891-201/pos_patterns.ENCSR020CLV_ChIP_ZNF891_HepG2_ENCSR182TDX_counts_pattern_7.n_335-vs-ZNF891-201.alignment counts-znf_b1h_alignment/ZNF891-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZNF891-201/pos_patterns.ENCSR020CLV_ChIP_ZNF891_HepG2_ENCSR182TDX_counts_pattern_9.n_264-vs-ZNF891-201.alignment counts-znf_b1h_alignment/ZNF891-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL11A-211/pos_patterns.ENCSR000BHA_ChIP_BCL11A_GM12878_ENCSR683WNX_counts_pattern_4.n_1547-vs-BCL11A-211.alignment counts-znf_b1h_alignment/BCL11A-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL11A-211/pos_patterns.ENCSR000BHA_ChIP_BCL11A_GM12878_ENCSR683WNX_counts_pattern_5.n_1303-vs-BCL11A-211.alignment counts-znf_b1h_alignment/BCL11A-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL11A-211/pos_patterns.ENCSR000BHA_ChIP_BCL11A_GM12878_ENCSR683WNX_counts_pattern_6.n_268-vs-BCL11A-211.alignment counts-znf_b1h_alignment/BCL11A-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL11A-211/pos_patterns.ENCSR000BHA_ChIP_BCL11A_GM12878_ENCSR683WNX_counts_pattern_7.n_149-vs-BCL11A-211.alignment counts-znf_b1h_alignment/BCL11A-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL11A-211/pos_patterns.ENCSR000BHA_ChIP_BCL11A_GM12878_ENCSR683WNX_counts_pattern_8.n_54-vs-BCL11A-211.alignment counts-znf_b1h_alignment/BCL11A-211/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL11A-211/pos_patterns.ENCSR000BIP_ChIP_BCL11A_H1_ENCSR787IRY_counts_pattern_1.n_196-vs-BCL11A-211.alignment counts-znf_b1h_alignment/BCL11A-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL11A-211/pos_patterns.ENCSR000BIP_ChIP_BCL11A_H1_ENCSR787IRY_counts_pattern_2.n_114-vs-BCL11A-211.alignment counts-znf_b1h_alignment/BCL11A-211/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL11A-211/pos_patterns.ENCSR000BIP_ChIP_BCL11A_H1_ENCSR787IRY_counts_pattern_6.n_53-vs-BCL11A-211.alignment counts-znf_b1h_alignment/BCL11A-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL11A-211/pos_patterns.ENCSR000BIP_ChIP_BCL11A_H1_ENCSR787IRY_counts_pattern_7.n_38-vs-BCL11A-211.alignment counts-znf_b1h_alignment/BCL11A-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL11A-211/pos_patterns.ENCSR000BIP_ChIP_BCL11A_H1_ENCSR787IRY_counts_pattern_8.n_35-vs-BCL11A-211.alignment counts-znf_b1h_alignment/BCL11A-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL11A-211/pos_patterns.ENCSR000BIP_ChIP_BCL11A_H1_ENCSR787IRY_counts_pattern_9.n_34-vs-BCL11A-211.alignment counts-znf_b1h_alignment/BCL11A-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL11A-211/pos_patterns.ENCSR000BMJ_ChIP_BCL11A_H1_ENCSR720IAY_counts_pattern_0.n_180-vs-BCL11A-211.alignment counts-znf_b1h_alignment/BCL11A-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL11A-211/pos_patterns.ENCSR000BMJ_ChIP_BCL11A_H1_ENCSR720IAY_counts_pattern_10.n_35-vs-BCL11A-211.alignment counts-znf_b1h_alignment/BCL11A-211/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL11A-211/pos_patterns.ENCSR000BMJ_ChIP_BCL11A_H1_ENCSR720IAY_counts_pattern_12.n_27-vs-BCL11A-211.alignment counts-znf_b1h_alignment/BCL11A-211/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL11A-211/pos_patterns.ENCSR000BMJ_ChIP_BCL11A_H1_ENCSR720IAY_counts_pattern_14.n_23-vs-BCL11A-211.alignment counts-znf_b1h_alignment/BCL11A-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL11A-211/pos_patterns.ENCSR000BMJ_ChIP_BCL11A_H1_ENCSR720IAY_counts_pattern_1.n_145-vs-BCL11A-211.alignment counts-znf_b1h_alignment/BCL11A-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL11A-211/pos_patterns.ENCSR000BMJ_ChIP_BCL11A_H1_ENCSR720IAY_counts_pattern_2.n_101-vs-BCL11A-211.alignment counts-znf_b1h_alignment/BCL11A-211/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL11A-211/pos_patterns.ENCSR000BMJ_ChIP_BCL11A_H1_ENCSR720IAY_counts_pattern_4.n_78-vs-BCL11A-211.alignment counts-znf_b1h_alignment/BCL11A-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL11A-211/pos_patterns.ENCSR000BMJ_ChIP_BCL11A_H1_ENCSR720IAY_counts_pattern_5.n_76-vs-BCL11A-211.alignment counts-znf_b1h_alignment/BCL11A-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL11A-211/pos_patterns.ENCSR000BMJ_ChIP_BCL11A_H1_ENCSR720IAY_counts_pattern_6.n_73-vs-BCL11A-211.alignment counts-znf_b1h_alignment/BCL11A-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL11A-211/pos_patterns.ENCSR000BMJ_ChIP_BCL11A_H1_ENCSR720IAY_counts_pattern_7.n_72-vs-BCL11A-211.alignment counts-znf_b1h_alignment/BCL11A-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL11A-211/pos_patterns.ENCSR000BMJ_ChIP_BCL11A_H1_ENCSR720IAY_counts_pattern_8.n_51-vs-BCL11A-211.alignment counts-znf_b1h_alignment/BCL11A-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL11A-211/pos_patterns.ENCSR000BMJ_ChIP_BCL11A_H1_ENCSR720IAY_counts_pattern_9.n_40-vs-BCL11A-211.alignment counts-znf_b1h_alignment/BCL11A-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL11A-211/pos_patterns.ENCSR021DJC_ChIP_BCL11A_HEK293_ENCSR027OIP_counts_pattern_0.n_2080-vs-BCL11A-211.alignment counts-znf_b1h_alignment/BCL11A-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL11A-211/pos_patterns.ENCSR021DJC_ChIP_BCL11A_HEK293_ENCSR027OIP_counts_pattern_1.n_1825-vs-BCL11A-211.alignment counts-znf_b1h_alignment/BCL11A-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL11A-211/pos_patterns.ENCSR021DJC_ChIP_BCL11A_HEK293_ENCSR027OIP_counts_pattern_2.n_1220-vs-BCL11A-211.alignment counts-znf_b1h_alignment/BCL11A-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL11A-211/pos_patterns.ENCSR021DJC_ChIP_BCL11A_HEK293_ENCSR027OIP_counts_pattern_3.n_627-vs-BCL11A-211.alignment counts-znf_b1h_alignment/BCL11A-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL11A-211/pos_patterns.ENCSR021DJC_ChIP_BCL11A_HEK293_ENCSR027OIP_counts_pattern_4.n_412-vs-BCL11A-211.alignment counts-znf_b1h_alignment/BCL11A-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL11A-211/pos_patterns.ENCSR021DJC_ChIP_BCL11A_HEK293_ENCSR027OIP_counts_pattern_5.n_358-vs-BCL11A-211.alignment counts-znf_b1h_alignment/BCL11A-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL11A-211/pos_patterns.ENCSR021DJC_ChIP_BCL11A_HEK293_ENCSR027OIP_counts_pattern_6.n_197-vs-BCL11A-211.alignment counts-znf_b1h_alignment/BCL11A-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL11A-211/pos_patterns.ENCSR021DJC_ChIP_BCL11A_HEK293_ENCSR027OIP_counts_pattern_7.n_83-vs-BCL11A-211.alignment counts-znf_b1h_alignment/BCL11A-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL11A-211/pos_patterns.ENCSR021DJC_ChIP_BCL11A_HEK293_ENCSR027OIP_counts_pattern_8.n_66-vs-BCL11A-211.alignment counts-znf_b1h_alignment/BCL11A-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL11A-211/pos_patterns.ENCSR021DJC_ChIP_BCL11A_HEK293_ENCSR027OIP_counts_pattern_9.n_26-vs-BCL11A-211.alignment counts-znf_b1h_alignment/BCL11A-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_0.n_5507-vs-BCL6-201.alignment counts-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_10.n_348-vs-BCL6-201.alignment counts-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_11.n_264-vs-BCL6-201.alignment counts-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_12.n_223-vs-BCL6-201.alignment counts-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_13.n_116-vs-BCL6-201.alignment counts-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_14.n_103-vs-BCL6-201.alignment counts-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_15.n_81-vs-BCL6-201.alignment counts-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_16.n_71-vs-BCL6-201.alignment counts-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_17.n_42-vs-BCL6-201.alignment counts-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_18.n_36-vs-BCL6-201.alignment counts-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_19.n_36-vs-BCL6-201.alignment counts-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_1.n_3941-vs-BCL6-201.alignment counts-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_20.n_31-vs-BCL6-201.alignment counts-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_21.n_25-vs-BCL6-201.alignment counts-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_22.n_22-vs-BCL6-201.alignment counts-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_23.n_21-vs-BCL6-201.alignment counts-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_24.n_20-vs-BCL6-201.alignment counts-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_2.n_3839-vs-BCL6-201.alignment counts-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_3.n_3694-vs-BCL6-201.alignment counts-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_4.n_3332-vs-BCL6-201.alignment counts-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_5.n_1501-vs-BCL6-201.alignment counts-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_6.n_1400-vs-BCL6-201.alignment counts-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_7.n_1267-vs-BCL6-201.alignment counts-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_8.n_1223-vs-BCL6-201.alignment counts-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_9.n_881-vs-BCL6-201.alignment counts-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR802AHH_ChIP_BCL6_K562_ENCSR852ZEW_counts_pattern_0.n_1041-vs-BCL6-201.alignment counts-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR802AHH_ChIP_BCL6_K562_ENCSR852ZEW_counts_pattern_1.n_66-vs-BCL6-201.alignment counts-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR802AHH_ChIP_BCL6_K562_ENCSR852ZEW_counts_pattern_2.n_45-vs-BCL6-201.alignment counts-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR802AHH_ChIP_BCL6_K562_ENCSR852ZEW_counts_pattern_3.n_44-vs-BCL6-201.alignment counts-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR802AHH_ChIP_BCL6_K562_ENCSR852ZEW_counts_pattern_4.n_25-vs-BCL6-201.alignment counts-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR802AHH_ChIP_BCL6_K562_ENCSR852ZEW_counts_pattern_5.n_22-vs-BCL6-201.alignment counts-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR802AHH_ChIP_BCL6_K562_ENCSR852ZEW_counts_pattern_6.n_21-vs-BCL6-201.alignment counts-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_0.n_5507-vs-BCL6-206.alignment counts-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_10.n_348-vs-BCL6-206.alignment counts-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_11.n_264-vs-BCL6-206.alignment counts-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_12.n_223-vs-BCL6-206.alignment counts-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_13.n_116-vs-BCL6-206.alignment counts-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_14.n_103-vs-BCL6-206.alignment counts-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_15.n_81-vs-BCL6-206.alignment counts-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_16.n_71-vs-BCL6-206.alignment counts-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_17.n_42-vs-BCL6-206.alignment counts-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_18.n_36-vs-BCL6-206.alignment counts-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_19.n_36-vs-BCL6-206.alignment counts-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_1.n_3941-vs-BCL6-206.alignment counts-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_20.n_31-vs-BCL6-206.alignment counts-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_21.n_25-vs-BCL6-206.alignment counts-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_22.n_22-vs-BCL6-206.alignment counts-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_23.n_21-vs-BCL6-206.alignment counts-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_24.n_20-vs-BCL6-206.alignment counts-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_2.n_3839-vs-BCL6-206.alignment counts-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_3.n_3694-vs-BCL6-206.alignment counts-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_4.n_3332-vs-BCL6-206.alignment counts-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_5.n_1501-vs-BCL6-206.alignment counts-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_6.n_1400-vs-BCL6-206.alignment counts-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_7.n_1267-vs-BCL6-206.alignment counts-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_8.n_1223-vs-BCL6-206.alignment counts-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_counts_pattern_9.n_881-vs-BCL6-206.alignment counts-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR802AHH_ChIP_BCL6_K562_ENCSR852ZEW_counts_pattern_0.n_1041-vs-BCL6-206.alignment counts-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR802AHH_ChIP_BCL6_K562_ENCSR852ZEW_counts_pattern_1.n_66-vs-BCL6-206.alignment counts-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR802AHH_ChIP_BCL6_K562_ENCSR852ZEW_counts_pattern_2.n_45-vs-BCL6-206.alignment counts-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR802AHH_ChIP_BCL6_K562_ENCSR852ZEW_counts_pattern_3.n_44-vs-BCL6-206.alignment counts-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR802AHH_ChIP_BCL6_K562_ENCSR852ZEW_counts_pattern_4.n_25-vs-BCL6-206.alignment counts-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR802AHH_ChIP_BCL6_K562_ENCSR852ZEW_counts_pattern_5.n_22-vs-BCL6-206.alignment counts-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR802AHH_ChIP_BCL6_K562_ENCSR852ZEW_counts_pattern_6.n_21-vs-BCL6-206.alignment counts-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6B-201/pos_patterns.ENCSR673SGK_ChIP_BCL6B_HEK293_ENCSR317PHW_counts_pattern_0.n_4782-vs-BCL6B-201.alignment counts-znf_b1h_alignment/BCL6B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6B-201/pos_patterns.ENCSR673SGK_ChIP_BCL6B_HEK293_ENCSR317PHW_counts_pattern_10.n_31-vs-BCL6B-201.alignment counts-znf_b1h_alignment/BCL6B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6B-201/pos_patterns.ENCSR673SGK_ChIP_BCL6B_HEK293_ENCSR317PHW_counts_pattern_11.n_23-vs-BCL6B-201.alignment counts-znf_b1h_alignment/BCL6B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6B-201/pos_patterns.ENCSR673SGK_ChIP_BCL6B_HEK293_ENCSR317PHW_counts_pattern_1.n_1175-vs-BCL6B-201.alignment counts-znf_b1h_alignment/BCL6B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6B-201/pos_patterns.ENCSR673SGK_ChIP_BCL6B_HEK293_ENCSR317PHW_counts_pattern_2.n_884-vs-BCL6B-201.alignment counts-znf_b1h_alignment/BCL6B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6B-201/pos_patterns.ENCSR673SGK_ChIP_BCL6B_HEK293_ENCSR317PHW_counts_pattern_3.n_869-vs-BCL6B-201.alignment counts-znf_b1h_alignment/BCL6B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6B-201/pos_patterns.ENCSR673SGK_ChIP_BCL6B_HEK293_ENCSR317PHW_counts_pattern_4.n_781-vs-BCL6B-201.alignment counts-znf_b1h_alignment/BCL6B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6B-201/pos_patterns.ENCSR673SGK_ChIP_BCL6B_HEK293_ENCSR317PHW_counts_pattern_5.n_619-vs-BCL6B-201.alignment counts-znf_b1h_alignment/BCL6B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6B-201/pos_patterns.ENCSR673SGK_ChIP_BCL6B_HEK293_ENCSR317PHW_counts_pattern_6.n_182-vs-BCL6B-201.alignment counts-znf_b1h_alignment/BCL6B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6B-201/pos_patterns.ENCSR673SGK_ChIP_BCL6B_HEK293_ENCSR317PHW_counts_pattern_7.n_113-vs-BCL6B-201.alignment counts-znf_b1h_alignment/BCL6B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6B-201/pos_patterns.ENCSR673SGK_ChIP_BCL6B_HEK293_ENCSR317PHW_counts_pattern_8.n_78-vs-BCL6B-201.alignment counts-znf_b1h_alignment/BCL6B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/BCL6B-201/pos_patterns.ENCSR673SGK_ChIP_BCL6B_HEK293_ENCSR317PHW_counts_pattern_9.n_36-vs-BCL6B-201.alignment counts-znf_b1h_alignment/BCL6B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/DZIP1-206/neg_patterns.ENCSR895KNN_ChIP_DZIP1_HepG2_ENCSR060XJL_counts_pattern_0.n_64-vs-DZIP1-206.alignment counts-znf_b1h_alignment/DZIP1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/DZIP1-206/neg_patterns.ENCSR895KNN_ChIP_DZIP1_HepG2_ENCSR060XJL_counts_pattern_1.n_57-vs-DZIP1-206.alignment counts-znf_b1h_alignment/DZIP1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/DZIP1-206/neg_patterns.ENCSR895KNN_ChIP_DZIP1_HepG2_ENCSR060XJL_counts_pattern_2.n_34-vs-DZIP1-206.alignment counts-znf_b1h_alignment/DZIP1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/DZIP1-206/neg_patterns.ENCSR895KNN_ChIP_DZIP1_HepG2_ENCSR060XJL_counts_pattern_3.n_31-vs-DZIP1-206.alignment counts-znf_b1h_alignment/DZIP1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/DZIP1-206/neg_patterns.ENCSR895KNN_ChIP_DZIP1_HepG2_ENCSR060XJL_counts_pattern_4.n_29-vs-DZIP1-206.alignment counts-znf_b1h_alignment/DZIP1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/DZIP1-206/neg_patterns.ENCSR895KNN_ChIP_DZIP1_HepG2_ENCSR060XJL_counts_pattern_5.n_24-vs-DZIP1-206.alignment counts-znf_b1h_alignment/DZIP1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/DZIP1-206/neg_patterns.ENCSR895KNN_ChIP_DZIP1_HepG2_ENCSR060XJL_counts_pattern_6.n_23-vs-DZIP1-206.alignment counts-znf_b1h_alignment/DZIP1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/DZIP1-206/pos_patterns.ENCSR895KNN_ChIP_DZIP1_HepG2_ENCSR060XJL_counts_pattern_0.n_2013-vs-DZIP1-206.alignment counts-znf_b1h_alignment/DZIP1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/DZIP1-206/pos_patterns.ENCSR895KNN_ChIP_DZIP1_HepG2_ENCSR060XJL_counts_pattern_10.n_37-vs-DZIP1-206.alignment counts-znf_b1h_alignment/DZIP1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/DZIP1-206/pos_patterns.ENCSR895KNN_ChIP_DZIP1_HepG2_ENCSR060XJL_counts_pattern_11.n_29-vs-DZIP1-206.alignment counts-znf_b1h_alignment/DZIP1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/DZIP1-206/pos_patterns.ENCSR895KNN_ChIP_DZIP1_HepG2_ENCSR060XJL_counts_pattern_12.n_25-vs-DZIP1-206.alignment counts-znf_b1h_alignment/DZIP1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/DZIP1-206/pos_patterns.ENCSR895KNN_ChIP_DZIP1_HepG2_ENCSR060XJL_counts_pattern_1.n_1685-vs-DZIP1-206.alignment counts-znf_b1h_alignment/DZIP1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/DZIP1-206/pos_patterns.ENCSR895KNN_ChIP_DZIP1_HepG2_ENCSR060XJL_counts_pattern_2.n_1680-vs-DZIP1-206.alignment counts-znf_b1h_alignment/DZIP1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/DZIP1-206/pos_patterns.ENCSR895KNN_ChIP_DZIP1_HepG2_ENCSR060XJL_counts_pattern_3.n_1621-vs-DZIP1-206.alignment counts-znf_b1h_alignment/DZIP1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/DZIP1-206/pos_patterns.ENCSR895KNN_ChIP_DZIP1_HepG2_ENCSR060XJL_counts_pattern_4.n_349-vs-DZIP1-206.alignment counts-znf_b1h_alignment/DZIP1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/DZIP1-206/pos_patterns.ENCSR895KNN_ChIP_DZIP1_HepG2_ENCSR060XJL_counts_pattern_5.n_303-vs-DZIP1-206.alignment counts-znf_b1h_alignment/DZIP1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/DZIP1-206/pos_patterns.ENCSR895KNN_ChIP_DZIP1_HepG2_ENCSR060XJL_counts_pattern_6.n_137-vs-DZIP1-206.alignment counts-znf_b1h_alignment/DZIP1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/DZIP1-206/pos_patterns.ENCSR895KNN_ChIP_DZIP1_HepG2_ENCSR060XJL_counts_pattern_7.n_74-vs-DZIP1-206.alignment counts-znf_b1h_alignment/DZIP1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/DZIP1-206/pos_patterns.ENCSR895KNN_ChIP_DZIP1_HepG2_ENCSR060XJL_counts_pattern_8.n_59-vs-DZIP1-206.alignment counts-znf_b1h_alignment/DZIP1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/DZIP1-206/pos_patterns.ENCSR895KNN_ChIP_DZIP1_HepG2_ENCSR060XJL_counts_pattern_9.n_43-vs-DZIP1-206.alignment counts-znf_b1h_alignment/DZIP1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-201/pos_patterns.ENCSR003GUC_ChIP_E4F1_K562_ENCSR283UAU_counts_pattern_0.n_924-vs-E4F1-201.alignment counts-znf_b1h_alignment/E4F1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-201/pos_patterns.ENCSR003GUC_ChIP_E4F1_K562_ENCSR283UAU_counts_pattern_10.n_25-vs-E4F1-201.alignment counts-znf_b1h_alignment/E4F1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-201/pos_patterns.ENCSR003GUC_ChIP_E4F1_K562_ENCSR283UAU_counts_pattern_1.n_75-vs-E4F1-201.alignment counts-znf_b1h_alignment/E4F1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-201/pos_patterns.ENCSR003GUC_ChIP_E4F1_K562_ENCSR283UAU_counts_pattern_2.n_72-vs-E4F1-201.alignment counts-znf_b1h_alignment/E4F1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-201/pos_patterns.ENCSR003GUC_ChIP_E4F1_K562_ENCSR283UAU_counts_pattern_3.n_53-vs-E4F1-201.alignment counts-znf_b1h_alignment/E4F1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-201/pos_patterns.ENCSR003GUC_ChIP_E4F1_K562_ENCSR283UAU_counts_pattern_4.n_40-vs-E4F1-201.alignment counts-znf_b1h_alignment/E4F1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-201/pos_patterns.ENCSR003GUC_ChIP_E4F1_K562_ENCSR283UAU_counts_pattern_5.n_37-vs-E4F1-201.alignment counts-znf_b1h_alignment/E4F1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-201/pos_patterns.ENCSR003GUC_ChIP_E4F1_K562_ENCSR283UAU_counts_pattern_6.n_35-vs-E4F1-201.alignment counts-znf_b1h_alignment/E4F1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-201/pos_patterns.ENCSR003GUC_ChIP_E4F1_K562_ENCSR283UAU_counts_pattern_7.n_32-vs-E4F1-201.alignment counts-znf_b1h_alignment/E4F1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-201/pos_patterns.ENCSR003GUC_ChIP_E4F1_K562_ENCSR283UAU_counts_pattern_8.n_32-vs-E4F1-201.alignment counts-znf_b1h_alignment/E4F1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-201/pos_patterns.ENCSR003GUC_ChIP_E4F1_K562_ENCSR283UAU_counts_pattern_9.n_32-vs-E4F1-201.alignment counts-znf_b1h_alignment/E4F1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-201/pos_patterns.ENCSR439WAF_ChIP_E4F1_GM12878_ENCSR691OIV_counts_pattern_0.n_2090-vs-E4F1-201.alignment counts-znf_b1h_alignment/E4F1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-201/pos_patterns.ENCSR439WAF_ChIP_E4F1_GM12878_ENCSR691OIV_counts_pattern_1.n_1003-vs-E4F1-201.alignment counts-znf_b1h_alignment/E4F1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-201/pos_patterns.ENCSR439WAF_ChIP_E4F1_GM12878_ENCSR691OIV_counts_pattern_2.n_45-vs-E4F1-201.alignment counts-znf_b1h_alignment/E4F1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-201/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_0.n_12604-vs-E4F1-201.alignment counts-znf_b1h_alignment/E4F1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-201/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_10.n_131-vs-E4F1-201.alignment counts-znf_b1h_alignment/E4F1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-201/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_11.n_128-vs-E4F1-201.alignment counts-znf_b1h_alignment/E4F1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-201/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_12.n_121-vs-E4F1-201.alignment counts-znf_b1h_alignment/E4F1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-201/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_13.n_115-vs-E4F1-201.alignment counts-znf_b1h_alignment/E4F1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-201/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_14.n_105-vs-E4F1-201.alignment counts-znf_b1h_alignment/E4F1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-201/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_15.n_84-vs-E4F1-201.alignment counts-znf_b1h_alignment/E4F1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-201/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_16.n_70-vs-E4F1-201.alignment counts-znf_b1h_alignment/E4F1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-201/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_17.n_43-vs-E4F1-201.alignment counts-znf_b1h_alignment/E4F1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-201/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_18.n_34-vs-E4F1-201.alignment counts-znf_b1h_alignment/E4F1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-201/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_19.n_33-vs-E4F1-201.alignment counts-znf_b1h_alignment/E4F1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-201/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_1.n_3270-vs-E4F1-201.alignment counts-znf_b1h_alignment/E4F1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-201/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_20.n_32-vs-E4F1-201.alignment counts-znf_b1h_alignment/E4F1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-201/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_21.n_29-vs-E4F1-201.alignment counts-znf_b1h_alignment/E4F1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-201/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_22.n_20-vs-E4F1-201.alignment counts-znf_b1h_alignment/E4F1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-201/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_2.n_3037-vs-E4F1-201.alignment counts-znf_b1h_alignment/E4F1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-201/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_3.n_1330-vs-E4F1-201.alignment counts-znf_b1h_alignment/E4F1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-201/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_4.n_801-vs-E4F1-201.alignment counts-znf_b1h_alignment/E4F1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-201/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_5.n_624-vs-E4F1-201.alignment counts-znf_b1h_alignment/E4F1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-201/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_6.n_547-vs-E4F1-201.alignment counts-znf_b1h_alignment/E4F1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-201/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_7.n_426-vs-E4F1-201.alignment counts-znf_b1h_alignment/E4F1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-201/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_8.n_409-vs-E4F1-201.alignment counts-znf_b1h_alignment/E4F1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-201/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_9.n_258-vs-E4F1-201.alignment counts-znf_b1h_alignment/E4F1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-201/pos_patterns.ENCSR841YWU_ChIP_E4F1_MCF-7_ENCSR977BTV_counts_pattern_0.n_1052-vs-E4F1-201.alignment counts-znf_b1h_alignment/E4F1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-201/pos_patterns.ENCSR841YWU_ChIP_E4F1_MCF-7_ENCSR977BTV_counts_pattern_1.n_62-vs-E4F1-201.alignment counts-znf_b1h_alignment/E4F1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-201/pos_patterns.ENCSR841YWU_ChIP_E4F1_MCF-7_ENCSR977BTV_counts_pattern_2.n_59-vs-E4F1-201.alignment counts-znf_b1h_alignment/E4F1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-201/pos_patterns.ENCSR841YWU_ChIP_E4F1_MCF-7_ENCSR977BTV_counts_pattern_3.n_45-vs-E4F1-201.alignment counts-znf_b1h_alignment/E4F1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-201/pos_patterns.ENCSR841YWU_ChIP_E4F1_MCF-7_ENCSR977BTV_counts_pattern_4.n_38-vs-E4F1-201.alignment counts-znf_b1h_alignment/E4F1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-206/pos_patterns.ENCSR003GUC_ChIP_E4F1_K562_ENCSR283UAU_counts_pattern_0.n_924-vs-E4F1-206.alignment counts-znf_b1h_alignment/E4F1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-206/pos_patterns.ENCSR003GUC_ChIP_E4F1_K562_ENCSR283UAU_counts_pattern_10.n_25-vs-E4F1-206.alignment counts-znf_b1h_alignment/E4F1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-206/pos_patterns.ENCSR003GUC_ChIP_E4F1_K562_ENCSR283UAU_counts_pattern_1.n_75-vs-E4F1-206.alignment counts-znf_b1h_alignment/E4F1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-206/pos_patterns.ENCSR003GUC_ChIP_E4F1_K562_ENCSR283UAU_counts_pattern_2.n_72-vs-E4F1-206.alignment counts-znf_b1h_alignment/E4F1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-206/pos_patterns.ENCSR003GUC_ChIP_E4F1_K562_ENCSR283UAU_counts_pattern_3.n_53-vs-E4F1-206.alignment counts-znf_b1h_alignment/E4F1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-206/pos_patterns.ENCSR003GUC_ChIP_E4F1_K562_ENCSR283UAU_counts_pattern_4.n_40-vs-E4F1-206.alignment counts-znf_b1h_alignment/E4F1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-206/pos_patterns.ENCSR003GUC_ChIP_E4F1_K562_ENCSR283UAU_counts_pattern_5.n_37-vs-E4F1-206.alignment counts-znf_b1h_alignment/E4F1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-206/pos_patterns.ENCSR003GUC_ChIP_E4F1_K562_ENCSR283UAU_counts_pattern_6.n_35-vs-E4F1-206.alignment counts-znf_b1h_alignment/E4F1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-206/pos_patterns.ENCSR003GUC_ChIP_E4F1_K562_ENCSR283UAU_counts_pattern_7.n_32-vs-E4F1-206.alignment counts-znf_b1h_alignment/E4F1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-206/pos_patterns.ENCSR003GUC_ChIP_E4F1_K562_ENCSR283UAU_counts_pattern_8.n_32-vs-E4F1-206.alignment counts-znf_b1h_alignment/E4F1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-206/pos_patterns.ENCSR003GUC_ChIP_E4F1_K562_ENCSR283UAU_counts_pattern_9.n_32-vs-E4F1-206.alignment counts-znf_b1h_alignment/E4F1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-206/pos_patterns.ENCSR439WAF_ChIP_E4F1_GM12878_ENCSR691OIV_counts_pattern_0.n_2090-vs-E4F1-206.alignment counts-znf_b1h_alignment/E4F1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-206/pos_patterns.ENCSR439WAF_ChIP_E4F1_GM12878_ENCSR691OIV_counts_pattern_1.n_1003-vs-E4F1-206.alignment counts-znf_b1h_alignment/E4F1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-206/pos_patterns.ENCSR439WAF_ChIP_E4F1_GM12878_ENCSR691OIV_counts_pattern_2.n_45-vs-E4F1-206.alignment counts-znf_b1h_alignment/E4F1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-206/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_0.n_12604-vs-E4F1-206.alignment counts-znf_b1h_alignment/E4F1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-206/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_10.n_131-vs-E4F1-206.alignment counts-znf_b1h_alignment/E4F1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-206/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_11.n_128-vs-E4F1-206.alignment counts-znf_b1h_alignment/E4F1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-206/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_12.n_121-vs-E4F1-206.alignment counts-znf_b1h_alignment/E4F1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-206/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_13.n_115-vs-E4F1-206.alignment counts-znf_b1h_alignment/E4F1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-206/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_14.n_105-vs-E4F1-206.alignment counts-znf_b1h_alignment/E4F1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-206/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_15.n_84-vs-E4F1-206.alignment counts-znf_b1h_alignment/E4F1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-206/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_16.n_70-vs-E4F1-206.alignment counts-znf_b1h_alignment/E4F1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-206/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_17.n_43-vs-E4F1-206.alignment counts-znf_b1h_alignment/E4F1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-206/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_18.n_34-vs-E4F1-206.alignment counts-znf_b1h_alignment/E4F1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-206/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_19.n_33-vs-E4F1-206.alignment counts-znf_b1h_alignment/E4F1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-206/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_1.n_3270-vs-E4F1-206.alignment counts-znf_b1h_alignment/E4F1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-206/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_20.n_32-vs-E4F1-206.alignment counts-znf_b1h_alignment/E4F1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-206/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_21.n_29-vs-E4F1-206.alignment counts-znf_b1h_alignment/E4F1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-206/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_22.n_20-vs-E4F1-206.alignment counts-znf_b1h_alignment/E4F1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-206/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_2.n_3037-vs-E4F1-206.alignment counts-znf_b1h_alignment/E4F1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-206/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_3.n_1330-vs-E4F1-206.alignment counts-znf_b1h_alignment/E4F1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-206/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_4.n_801-vs-E4F1-206.alignment counts-znf_b1h_alignment/E4F1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-206/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_5.n_624-vs-E4F1-206.alignment counts-znf_b1h_alignment/E4F1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-206/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_6.n_547-vs-E4F1-206.alignment counts-znf_b1h_alignment/E4F1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-206/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_7.n_426-vs-E4F1-206.alignment counts-znf_b1h_alignment/E4F1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-206/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_8.n_409-vs-E4F1-206.alignment counts-znf_b1h_alignment/E4F1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-206/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_9.n_258-vs-E4F1-206.alignment counts-znf_b1h_alignment/E4F1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-206/pos_patterns.ENCSR841YWU_ChIP_E4F1_MCF-7_ENCSR977BTV_counts_pattern_0.n_1052-vs-E4F1-206.alignment counts-znf_b1h_alignment/E4F1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-206/pos_patterns.ENCSR841YWU_ChIP_E4F1_MCF-7_ENCSR977BTV_counts_pattern_1.n_62-vs-E4F1-206.alignment counts-znf_b1h_alignment/E4F1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-206/pos_patterns.ENCSR841YWU_ChIP_E4F1_MCF-7_ENCSR977BTV_counts_pattern_2.n_59-vs-E4F1-206.alignment counts-znf_b1h_alignment/E4F1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-206/pos_patterns.ENCSR841YWU_ChIP_E4F1_MCF-7_ENCSR977BTV_counts_pattern_3.n_45-vs-E4F1-206.alignment counts-znf_b1h_alignment/E4F1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-206/pos_patterns.ENCSR841YWU_ChIP_E4F1_MCF-7_ENCSR977BTV_counts_pattern_4.n_38-vs-E4F1-206.alignment counts-znf_b1h_alignment/E4F1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-209/pos_patterns.ENCSR003GUC_ChIP_E4F1_K562_ENCSR283UAU_counts_pattern_0.n_924-vs-E4F1-209.alignment counts-znf_b1h_alignment/E4F1-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-209/pos_patterns.ENCSR003GUC_ChIP_E4F1_K562_ENCSR283UAU_counts_pattern_10.n_25-vs-E4F1-209.alignment counts-znf_b1h_alignment/E4F1-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-209/pos_patterns.ENCSR003GUC_ChIP_E4F1_K562_ENCSR283UAU_counts_pattern_1.n_75-vs-E4F1-209.alignment counts-znf_b1h_alignment/E4F1-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-209/pos_patterns.ENCSR003GUC_ChIP_E4F1_K562_ENCSR283UAU_counts_pattern_2.n_72-vs-E4F1-209.alignment counts-znf_b1h_alignment/E4F1-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-209/pos_patterns.ENCSR003GUC_ChIP_E4F1_K562_ENCSR283UAU_counts_pattern_3.n_53-vs-E4F1-209.alignment counts-znf_b1h_alignment/E4F1-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-209/pos_patterns.ENCSR003GUC_ChIP_E4F1_K562_ENCSR283UAU_counts_pattern_4.n_40-vs-E4F1-209.alignment counts-znf_b1h_alignment/E4F1-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-209/pos_patterns.ENCSR003GUC_ChIP_E4F1_K562_ENCSR283UAU_counts_pattern_5.n_37-vs-E4F1-209.alignment counts-znf_b1h_alignment/E4F1-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-209/pos_patterns.ENCSR003GUC_ChIP_E4F1_K562_ENCSR283UAU_counts_pattern_6.n_35-vs-E4F1-209.alignment counts-znf_b1h_alignment/E4F1-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-209/pos_patterns.ENCSR003GUC_ChIP_E4F1_K562_ENCSR283UAU_counts_pattern_7.n_32-vs-E4F1-209.alignment counts-znf_b1h_alignment/E4F1-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-209/pos_patterns.ENCSR003GUC_ChIP_E4F1_K562_ENCSR283UAU_counts_pattern_8.n_32-vs-E4F1-209.alignment counts-znf_b1h_alignment/E4F1-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-209/pos_patterns.ENCSR003GUC_ChIP_E4F1_K562_ENCSR283UAU_counts_pattern_9.n_32-vs-E4F1-209.alignment counts-znf_b1h_alignment/E4F1-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-209/pos_patterns.ENCSR439WAF_ChIP_E4F1_GM12878_ENCSR691OIV_counts_pattern_0.n_2090-vs-E4F1-209.alignment counts-znf_b1h_alignment/E4F1-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-209/pos_patterns.ENCSR439WAF_ChIP_E4F1_GM12878_ENCSR691OIV_counts_pattern_1.n_1003-vs-E4F1-209.alignment counts-znf_b1h_alignment/E4F1-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-209/pos_patterns.ENCSR439WAF_ChIP_E4F1_GM12878_ENCSR691OIV_counts_pattern_2.n_45-vs-E4F1-209.alignment counts-znf_b1h_alignment/E4F1-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-209/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_0.n_12604-vs-E4F1-209.alignment counts-znf_b1h_alignment/E4F1-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-209/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_10.n_131-vs-E4F1-209.alignment counts-znf_b1h_alignment/E4F1-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-209/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_11.n_128-vs-E4F1-209.alignment counts-znf_b1h_alignment/E4F1-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-209/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_12.n_121-vs-E4F1-209.alignment counts-znf_b1h_alignment/E4F1-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-209/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_13.n_115-vs-E4F1-209.alignment counts-znf_b1h_alignment/E4F1-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-209/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_14.n_105-vs-E4F1-209.alignment counts-znf_b1h_alignment/E4F1-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-209/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_15.n_84-vs-E4F1-209.alignment counts-znf_b1h_alignment/E4F1-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-209/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_16.n_70-vs-E4F1-209.alignment counts-znf_b1h_alignment/E4F1-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-209/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_17.n_43-vs-E4F1-209.alignment counts-znf_b1h_alignment/E4F1-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-209/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_18.n_34-vs-E4F1-209.alignment counts-znf_b1h_alignment/E4F1-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-209/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_19.n_33-vs-E4F1-209.alignment counts-znf_b1h_alignment/E4F1-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-209/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_1.n_3270-vs-E4F1-209.alignment counts-znf_b1h_alignment/E4F1-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-209/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_20.n_32-vs-E4F1-209.alignment counts-znf_b1h_alignment/E4F1-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-209/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_21.n_29-vs-E4F1-209.alignment counts-znf_b1h_alignment/E4F1-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-209/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_22.n_20-vs-E4F1-209.alignment counts-znf_b1h_alignment/E4F1-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-209/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_2.n_3037-vs-E4F1-209.alignment counts-znf_b1h_alignment/E4F1-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-209/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_3.n_1330-vs-E4F1-209.alignment counts-znf_b1h_alignment/E4F1-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-209/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_4.n_801-vs-E4F1-209.alignment counts-znf_b1h_alignment/E4F1-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-209/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_5.n_624-vs-E4F1-209.alignment counts-znf_b1h_alignment/E4F1-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-209/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_6.n_547-vs-E4F1-209.alignment counts-znf_b1h_alignment/E4F1-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-209/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_7.n_426-vs-E4F1-209.alignment counts-znf_b1h_alignment/E4F1-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-209/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_8.n_409-vs-E4F1-209.alignment counts-znf_b1h_alignment/E4F1-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-209/pos_patterns.ENCSR731LHZ_ChIP_E4F1_K562_ENCSR647ENX_counts_pattern_9.n_258-vs-E4F1-209.alignment counts-znf_b1h_alignment/E4F1-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-209/pos_patterns.ENCSR841YWU_ChIP_E4F1_MCF-7_ENCSR977BTV_counts_pattern_0.n_1052-vs-E4F1-209.alignment counts-znf_b1h_alignment/E4F1-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-209/pos_patterns.ENCSR841YWU_ChIP_E4F1_MCF-7_ENCSR977BTV_counts_pattern_1.n_62-vs-E4F1-209.alignment counts-znf_b1h_alignment/E4F1-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-209/pos_patterns.ENCSR841YWU_ChIP_E4F1_MCF-7_ENCSR977BTV_counts_pattern_2.n_59-vs-E4F1-209.alignment counts-znf_b1h_alignment/E4F1-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-209/pos_patterns.ENCSR841YWU_ChIP_E4F1_MCF-7_ENCSR977BTV_counts_pattern_3.n_45-vs-E4F1-209.alignment counts-znf_b1h_alignment/E4F1-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/E4F1-209/pos_patterns.ENCSR841YWU_ChIP_E4F1_MCF-7_ENCSR977BTV_counts_pattern_4.n_38-vs-E4F1-209.alignment counts-znf_b1h_alignment/E4F1-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/EGR2-201/Hughes_GR_models_EGR2_counts-pos.pattern_0.n_18087-vs-EGR2-201.alignment counts-znf_b1h_alignment/EGR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/EGR2-201/Hughes_GR_models_EGR2_counts-pos.pattern_10.n_123-vs-EGR2-201.alignment counts-znf_b1h_alignment/EGR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/EGR2-201/Hughes_GR_models_EGR2_counts-pos.pattern_11.n_122-vs-EGR2-201.alignment counts-znf_b1h_alignment/EGR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/EGR2-201/Hughes_GR_models_EGR2_counts-pos.pattern_12.n_106-vs-EGR2-201.alignment counts-znf_b1h_alignment/EGR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/EGR2-201/Hughes_GR_models_EGR2_counts-pos.pattern_13.n_104-vs-EGR2-201.alignment counts-znf_b1h_alignment/EGR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/EGR2-201/Hughes_GR_models_EGR2_counts-pos.pattern_14.n_77-vs-EGR2-201.alignment counts-znf_b1h_alignment/EGR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/EGR2-201/Hughes_GR_models_EGR2_counts-pos.pattern_15.n_76-vs-EGR2-201.alignment counts-znf_b1h_alignment/EGR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/EGR2-201/Hughes_GR_models_EGR2_counts-pos.pattern_16.n_47-vs-EGR2-201.alignment counts-znf_b1h_alignment/EGR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/EGR2-201/Hughes_GR_models_EGR2_counts-pos.pattern_17.n_37-vs-EGR2-201.alignment counts-znf_b1h_alignment/EGR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/EGR2-201/Hughes_GR_models_EGR2_counts-pos.pattern_18.n_29-vs-EGR2-201.alignment counts-znf_b1h_alignment/EGR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/EGR2-201/Hughes_GR_models_EGR2_counts-pos.pattern_19.n_29-vs-EGR2-201.alignment counts-znf_b1h_alignment/EGR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/EGR2-201/Hughes_GR_models_EGR2_counts-pos.pattern_1.n_632-vs-EGR2-201.alignment counts-znf_b1h_alignment/EGR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/EGR2-201/Hughes_GR_models_EGR2_counts-pos.pattern_20.n_23-vs-EGR2-201.alignment counts-znf_b1h_alignment/EGR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/EGR2-201/Hughes_GR_models_EGR2_counts-pos.pattern_2.n_521-vs-EGR2-201.alignment counts-znf_b1h_alignment/EGR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/EGR2-201/Hughes_GR_models_EGR2_counts-pos.pattern_3.n_438-vs-EGR2-201.alignment counts-znf_b1h_alignment/EGR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/EGR2-201/Hughes_GR_models_EGR2_counts-pos.pattern_4.n_358-vs-EGR2-201.alignment counts-znf_b1h_alignment/EGR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/EGR2-201/Hughes_GR_models_EGR2_counts-pos.pattern_5.n_305-vs-EGR2-201.alignment counts-znf_b1h_alignment/EGR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/EGR2-201/Hughes_GR_models_EGR2_counts-pos.pattern_6.n_221-vs-EGR2-201.alignment counts-znf_b1h_alignment/EGR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/EGR2-201/Hughes_GR_models_EGR2_counts-pos.pattern_7.n_147-vs-EGR2-201.alignment counts-znf_b1h_alignment/EGR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/EGR2-201/Hughes_GR_models_EGR2_counts-pos.pattern_8.n_124-vs-EGR2-201.alignment counts-znf_b1h_alignment/EGR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/EGR2-201/Hughes_GR_models_EGR2_counts-pos.pattern_9.n_123-vs-EGR2-201.alignment counts-znf_b1h_alignment/EGR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/EGR2-201/pos_patterns.ENCSR919CZU_ChIP_EGR2_HEK293_ENCSR905WNQ_counts_pattern_0.n_19306-vs-EGR2-201.alignment counts-znf_b1h_alignment/EGR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/EGR2-201/pos_patterns.ENCSR919CZU_ChIP_EGR2_HEK293_ENCSR905WNQ_counts_pattern_10.n_134-vs-EGR2-201.alignment counts-znf_b1h_alignment/EGR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/EGR2-201/pos_patterns.ENCSR919CZU_ChIP_EGR2_HEK293_ENCSR905WNQ_counts_pattern_11.n_125-vs-EGR2-201.alignment counts-znf_b1h_alignment/EGR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/EGR2-201/pos_patterns.ENCSR919CZU_ChIP_EGR2_HEK293_ENCSR905WNQ_counts_pattern_12.n_103-vs-EGR2-201.alignment counts-znf_b1h_alignment/EGR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/EGR2-201/pos_patterns.ENCSR919CZU_ChIP_EGR2_HEK293_ENCSR905WNQ_counts_pattern_13.n_91-vs-EGR2-201.alignment counts-znf_b1h_alignment/EGR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/EGR2-201/pos_patterns.ENCSR919CZU_ChIP_EGR2_HEK293_ENCSR905WNQ_counts_pattern_14.n_85-vs-EGR2-201.alignment counts-znf_b1h_alignment/EGR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/EGR2-201/pos_patterns.ENCSR919CZU_ChIP_EGR2_HEK293_ENCSR905WNQ_counts_pattern_15.n_80-vs-EGR2-201.alignment counts-znf_b1h_alignment/EGR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/EGR2-201/pos_patterns.ENCSR919CZU_ChIP_EGR2_HEK293_ENCSR905WNQ_counts_pattern_16.n_76-vs-EGR2-201.alignment counts-znf_b1h_alignment/EGR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/EGR2-201/pos_patterns.ENCSR919CZU_ChIP_EGR2_HEK293_ENCSR905WNQ_counts_pattern_17.n_58-vs-EGR2-201.alignment counts-znf_b1h_alignment/EGR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/EGR2-201/pos_patterns.ENCSR919CZU_ChIP_EGR2_HEK293_ENCSR905WNQ_counts_pattern_18.n_57-vs-EGR2-201.alignment counts-znf_b1h_alignment/EGR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/EGR2-201/pos_patterns.ENCSR919CZU_ChIP_EGR2_HEK293_ENCSR905WNQ_counts_pattern_19.n_46-vs-EGR2-201.alignment counts-znf_b1h_alignment/EGR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/EGR2-201/pos_patterns.ENCSR919CZU_ChIP_EGR2_HEK293_ENCSR905WNQ_counts_pattern_1.n_690-vs-EGR2-201.alignment counts-znf_b1h_alignment/EGR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/EGR2-201/pos_patterns.ENCSR919CZU_ChIP_EGR2_HEK293_ENCSR905WNQ_counts_pattern_20.n_43-vs-EGR2-201.alignment counts-znf_b1h_alignment/EGR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/EGR2-201/pos_patterns.ENCSR919CZU_ChIP_EGR2_HEK293_ENCSR905WNQ_counts_pattern_21.n_40-vs-EGR2-201.alignment counts-znf_b1h_alignment/EGR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/EGR2-201/pos_patterns.ENCSR919CZU_ChIP_EGR2_HEK293_ENCSR905WNQ_counts_pattern_22.n_21-vs-EGR2-201.alignment counts-znf_b1h_alignment/EGR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/EGR2-201/pos_patterns.ENCSR919CZU_ChIP_EGR2_HEK293_ENCSR905WNQ_counts_pattern_2.n_597-vs-EGR2-201.alignment counts-znf_b1h_alignment/EGR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/EGR2-201/pos_patterns.ENCSR919CZU_ChIP_EGR2_HEK293_ENCSR905WNQ_counts_pattern_3.n_578-vs-EGR2-201.alignment counts-znf_b1h_alignment/EGR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/EGR2-201/pos_patterns.ENCSR919CZU_ChIP_EGR2_HEK293_ENCSR905WNQ_counts_pattern_4.n_528-vs-EGR2-201.alignment counts-znf_b1h_alignment/EGR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/EGR2-201/pos_patterns.ENCSR919CZU_ChIP_EGR2_HEK293_ENCSR905WNQ_counts_pattern_5.n_464-vs-EGR2-201.alignment counts-znf_b1h_alignment/EGR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/EGR2-201/pos_patterns.ENCSR919CZU_ChIP_EGR2_HEK293_ENCSR905WNQ_counts_pattern_6.n_398-vs-EGR2-201.alignment counts-znf_b1h_alignment/EGR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/EGR2-201/pos_patterns.ENCSR919CZU_ChIP_EGR2_HEK293_ENCSR905WNQ_counts_pattern_7.n_310-vs-EGR2-201.alignment counts-znf_b1h_alignment/EGR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/EGR2-201/pos_patterns.ENCSR919CZU_ChIP_EGR2_HEK293_ENCSR905WNQ_counts_pattern_8.n_258-vs-EGR2-201.alignment counts-znf_b1h_alignment/EGR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/EGR2-201/pos_patterns.ENCSR919CZU_ChIP_EGR2_HEK293_ENCSR905WNQ_counts_pattern_9.n_252-vs-EGR2-201.alignment counts-znf_b1h_alignment/EGR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/FEZF1-202/Hughes_GR_models_FEZF1_counts-pos.pattern_0.n_5657-vs-FEZF1-202.alignment counts-znf_b1h_alignment/FEZF1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/FEZF1-202/Hughes_GR_models_FEZF1_counts-pos.pattern_1.n_4884-vs-FEZF1-202.alignment counts-znf_b1h_alignment/FEZF1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/FEZF1-202/Hughes_GR_models_FEZF1_counts-pos.pattern_2.n_382-vs-FEZF1-202.alignment counts-znf_b1h_alignment/FEZF1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/FEZF1-202/Hughes_GR_models_FEZF1_counts-pos.pattern_3.n_337-vs-FEZF1-202.alignment counts-znf_b1h_alignment/FEZF1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/FEZF1-202/Hughes_GR_models_FEZF1_counts-pos.pattern_4.n_45-vs-FEZF1-202.alignment counts-znf_b1h_alignment/FEZF1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/FEZF1-202/Hughes_GR_models_FEZF1_counts-pos.pattern_5.n_43-vs-FEZF1-202.alignment counts-znf_b1h_alignment/FEZF1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/FEZF1-202/Hughes_GR_models_FEZF1_counts-pos.pattern_6.n_22-vs-FEZF1-202.alignment counts-znf_b1h_alignment/FEZF1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/FEZF1-202/pos_patterns.ENCSR827NWO_ChIP_FEZF1_HEK293_ENCSR722ZLL_counts_pattern_0.n_9177-vs-FEZF1-202.alignment counts-znf_b1h_alignment/FEZF1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/FEZF1-202/pos_patterns.ENCSR827NWO_ChIP_FEZF1_HEK293_ENCSR722ZLL_counts_pattern_10.n_103-vs-FEZF1-202.alignment counts-znf_b1h_alignment/FEZF1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/FEZF1-202/pos_patterns.ENCSR827NWO_ChIP_FEZF1_HEK293_ENCSR722ZLL_counts_pattern_11.n_93-vs-FEZF1-202.alignment counts-znf_b1h_alignment/FEZF1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/FEZF1-202/pos_patterns.ENCSR827NWO_ChIP_FEZF1_HEK293_ENCSR722ZLL_counts_pattern_12.n_92-vs-FEZF1-202.alignment counts-znf_b1h_alignment/FEZF1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/FEZF1-202/pos_patterns.ENCSR827NWO_ChIP_FEZF1_HEK293_ENCSR722ZLL_counts_pattern_13.n_40-vs-FEZF1-202.alignment counts-znf_b1h_alignment/FEZF1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/FEZF1-202/pos_patterns.ENCSR827NWO_ChIP_FEZF1_HEK293_ENCSR722ZLL_counts_pattern_14.n_34-vs-FEZF1-202.alignment counts-znf_b1h_alignment/FEZF1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/FEZF1-202/pos_patterns.ENCSR827NWO_ChIP_FEZF1_HEK293_ENCSR722ZLL_counts_pattern_15.n_31-vs-FEZF1-202.alignment counts-znf_b1h_alignment/FEZF1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/FEZF1-202/pos_patterns.ENCSR827NWO_ChIP_FEZF1_HEK293_ENCSR722ZLL_counts_pattern_16.n_27-vs-FEZF1-202.alignment counts-znf_b1h_alignment/FEZF1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/FEZF1-202/pos_patterns.ENCSR827NWO_ChIP_FEZF1_HEK293_ENCSR722ZLL_counts_pattern_17.n_24-vs-FEZF1-202.alignment counts-znf_b1h_alignment/FEZF1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/FEZF1-202/pos_patterns.ENCSR827NWO_ChIP_FEZF1_HEK293_ENCSR722ZLL_counts_pattern_1.n_4566-vs-FEZF1-202.alignment counts-znf_b1h_alignment/FEZF1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/FEZF1-202/pos_patterns.ENCSR827NWO_ChIP_FEZF1_HEK293_ENCSR722ZLL_counts_pattern_2.n_2932-vs-FEZF1-202.alignment counts-znf_b1h_alignment/FEZF1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/FEZF1-202/pos_patterns.ENCSR827NWO_ChIP_FEZF1_HEK293_ENCSR722ZLL_counts_pattern_3.n_2652-vs-FEZF1-202.alignment counts-znf_b1h_alignment/FEZF1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/FEZF1-202/pos_patterns.ENCSR827NWO_ChIP_FEZF1_HEK293_ENCSR722ZLL_counts_pattern_4.n_2254-vs-FEZF1-202.alignment counts-znf_b1h_alignment/FEZF1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/FEZF1-202/pos_patterns.ENCSR827NWO_ChIP_FEZF1_HEK293_ENCSR722ZLL_counts_pattern_5.n_437-vs-FEZF1-202.alignment counts-znf_b1h_alignment/FEZF1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/FEZF1-202/pos_patterns.ENCSR827NWO_ChIP_FEZF1_HEK293_ENCSR722ZLL_counts_pattern_6.n_381-vs-FEZF1-202.alignment counts-znf_b1h_alignment/FEZF1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/FEZF1-202/pos_patterns.ENCSR827NWO_ChIP_FEZF1_HEK293_ENCSR722ZLL_counts_pattern_7.n_125-vs-FEZF1-202.alignment counts-znf_b1h_alignment/FEZF1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/FEZF1-202/pos_patterns.ENCSR827NWO_ChIP_FEZF1_HEK293_ENCSR722ZLL_counts_pattern_8.n_107-vs-FEZF1-202.alignment counts-znf_b1h_alignment/FEZF1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/FEZF1-202/pos_patterns.ENCSR827NWO_ChIP_FEZF1_HEK293_ENCSR722ZLL_counts_pattern_9.n_104-vs-FEZF1-202.alignment counts-znf_b1h_alignment/FEZF1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GFI1-201/pos_patterns.ENCSR849FVL_ChIP_GFI1_HepG2_ENCSR870DPI_counts_pattern_0.n_4687-vs-GFI1-201.alignment counts-znf_b1h_alignment/GFI1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GFI1-201/pos_patterns.ENCSR849FVL_ChIP_GFI1_HepG2_ENCSR870DPI_counts_pattern_10.n_32-vs-GFI1-201.alignment counts-znf_b1h_alignment/GFI1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GFI1-201/pos_patterns.ENCSR849FVL_ChIP_GFI1_HepG2_ENCSR870DPI_counts_pattern_1.n_4563-vs-GFI1-201.alignment counts-znf_b1h_alignment/GFI1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GFI1-201/pos_patterns.ENCSR849FVL_ChIP_GFI1_HepG2_ENCSR870DPI_counts_pattern_2.n_4241-vs-GFI1-201.alignment counts-znf_b1h_alignment/GFI1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GFI1-201/pos_patterns.ENCSR849FVL_ChIP_GFI1_HepG2_ENCSR870DPI_counts_pattern_3.n_3092-vs-GFI1-201.alignment counts-znf_b1h_alignment/GFI1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GFI1-201/pos_patterns.ENCSR849FVL_ChIP_GFI1_HepG2_ENCSR870DPI_counts_pattern_4.n_837-vs-GFI1-201.alignment counts-znf_b1h_alignment/GFI1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GFI1-201/pos_patterns.ENCSR849FVL_ChIP_GFI1_HepG2_ENCSR870DPI_counts_pattern_5.n_605-vs-GFI1-201.alignment counts-znf_b1h_alignment/GFI1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GFI1-201/pos_patterns.ENCSR849FVL_ChIP_GFI1_HepG2_ENCSR870DPI_counts_pattern_6.n_466-vs-GFI1-201.alignment counts-znf_b1h_alignment/GFI1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GFI1-201/pos_patterns.ENCSR849FVL_ChIP_GFI1_HepG2_ENCSR870DPI_counts_pattern_7.n_376-vs-GFI1-201.alignment counts-znf_b1h_alignment/GFI1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GFI1-201/pos_patterns.ENCSR849FVL_ChIP_GFI1_HepG2_ENCSR870DPI_counts_pattern_8.n_79-vs-GFI1-201.alignment counts-znf_b1h_alignment/GFI1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GFI1-201/pos_patterns.ENCSR849FVL_ChIP_GFI1_HepG2_ENCSR870DPI_counts_pattern_9.n_54-vs-GFI1-201.alignment counts-znf_b1h_alignment/GFI1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GFI1B-201/pos_patterns.ENCSR445PDR_ChIP_GFI1B_HEK293_ENCSR026EBR_counts_pattern_0.n_3874-vs-GFI1B-201.alignment counts-znf_b1h_alignment/GFI1B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GFI1B-201/pos_patterns.ENCSR445PDR_ChIP_GFI1B_HEK293_ENCSR026EBR_counts_pattern_1.n_759-vs-GFI1B-201.alignment counts-znf_b1h_alignment/GFI1B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GFI1B-201/pos_patterns.ENCSR445PDR_ChIP_GFI1B_HEK293_ENCSR026EBR_counts_pattern_2.n_693-vs-GFI1B-201.alignment counts-znf_b1h_alignment/GFI1B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GFI1B-201/pos_patterns.ENCSR445PDR_ChIP_GFI1B_HEK293_ENCSR026EBR_counts_pattern_3.n_76-vs-GFI1B-201.alignment counts-znf_b1h_alignment/GFI1B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GFI1B-201/pos_patterns.ENCSR445PDR_ChIP_GFI1B_HEK293_ENCSR026EBR_counts_pattern_4.n_57-vs-GFI1B-201.alignment counts-znf_b1h_alignment/GFI1B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GFI1B-201/pos_patterns.ENCSR445PDR_ChIP_GFI1B_HEK293_ENCSR026EBR_counts_pattern_5.n_24-vs-GFI1B-201.alignment counts-znf_b1h_alignment/GFI1B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GFI1B-203/pos_patterns.ENCSR445PDR_ChIP_GFI1B_HEK293_ENCSR026EBR_counts_pattern_0.n_3874-vs-GFI1B-203.alignment counts-znf_b1h_alignment/GFI1B-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GFI1B-203/pos_patterns.ENCSR445PDR_ChIP_GFI1B_HEK293_ENCSR026EBR_counts_pattern_1.n_759-vs-GFI1B-203.alignment counts-znf_b1h_alignment/GFI1B-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GFI1B-203/pos_patterns.ENCSR445PDR_ChIP_GFI1B_HEK293_ENCSR026EBR_counts_pattern_2.n_693-vs-GFI1B-203.alignment counts-znf_b1h_alignment/GFI1B-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GFI1B-203/pos_patterns.ENCSR445PDR_ChIP_GFI1B_HEK293_ENCSR026EBR_counts_pattern_3.n_76-vs-GFI1B-203.alignment counts-znf_b1h_alignment/GFI1B-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GFI1B-203/pos_patterns.ENCSR445PDR_ChIP_GFI1B_HEK293_ENCSR026EBR_counts_pattern_4.n_57-vs-GFI1B-203.alignment counts-znf_b1h_alignment/GFI1B-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GFI1B-203/pos_patterns.ENCSR445PDR_ChIP_GFI1B_HEK293_ENCSR026EBR_counts_pattern_5.n_24-vs-GFI1B-203.alignment counts-znf_b1h_alignment/GFI1B-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GFI1B-207/pos_patterns.ENCSR445PDR_ChIP_GFI1B_HEK293_ENCSR026EBR_counts_pattern_0.n_3874-vs-GFI1B-207.alignment counts-znf_b1h_alignment/GFI1B-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GFI1B-207/pos_patterns.ENCSR445PDR_ChIP_GFI1B_HEK293_ENCSR026EBR_counts_pattern_1.n_759-vs-GFI1B-207.alignment counts-znf_b1h_alignment/GFI1B-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GFI1B-207/pos_patterns.ENCSR445PDR_ChIP_GFI1B_HEK293_ENCSR026EBR_counts_pattern_2.n_693-vs-GFI1B-207.alignment counts-znf_b1h_alignment/GFI1B-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GFI1B-207/pos_patterns.ENCSR445PDR_ChIP_GFI1B_HEK293_ENCSR026EBR_counts_pattern_3.n_76-vs-GFI1B-207.alignment counts-znf_b1h_alignment/GFI1B-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GFI1B-207/pos_patterns.ENCSR445PDR_ChIP_GFI1B_HEK293_ENCSR026EBR_counts_pattern_4.n_57-vs-GFI1B-207.alignment counts-znf_b1h_alignment/GFI1B-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GFI1B-207/pos_patterns.ENCSR445PDR_ChIP_GFI1B_HEK293_ENCSR026EBR_counts_pattern_5.n_24-vs-GFI1B-207.alignment counts-znf_b1h_alignment/GFI1B-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI2-201/pos_patterns.ENCSR978EQY_ChIP_GLI2_HEK293_ENCSR731COQ_counts_pattern_0.n_1220-vs-GLI2-201.alignment counts-znf_b1h_alignment/GLI2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI2-201/pos_patterns.ENCSR978EQY_ChIP_GLI2_HEK293_ENCSR731COQ_counts_pattern_1.n_638-vs-GLI2-201.alignment counts-znf_b1h_alignment/GLI2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI2-201/pos_patterns.ENCSR978EQY_ChIP_GLI2_HEK293_ENCSR731COQ_counts_pattern_2.n_358-vs-GLI2-201.alignment counts-znf_b1h_alignment/GLI2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI2-201/pos_patterns.ENCSR978EQY_ChIP_GLI2_HEK293_ENCSR731COQ_counts_pattern_3.n_258-vs-GLI2-201.alignment counts-znf_b1h_alignment/GLI2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI2-201/pos_patterns.ENCSR978EQY_ChIP_GLI2_HEK293_ENCSR731COQ_counts_pattern_4.n_237-vs-GLI2-201.alignment counts-znf_b1h_alignment/GLI2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI2-201/pos_patterns.ENCSR978EQY_ChIP_GLI2_HEK293_ENCSR731COQ_counts_pattern_5.n_206-vs-GLI2-201.alignment counts-znf_b1h_alignment/GLI2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI2-201/pos_patterns.ENCSR978EQY_ChIP_GLI2_HEK293_ENCSR731COQ_counts_pattern_6.n_23-vs-GLI2-201.alignment counts-znf_b1h_alignment/GLI2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI2-208/pos_patterns.ENCSR978EQY_ChIP_GLI2_HEK293_ENCSR731COQ_counts_pattern_0.n_1220-vs-GLI2-208.alignment counts-znf_b1h_alignment/GLI2-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI2-208/pos_patterns.ENCSR978EQY_ChIP_GLI2_HEK293_ENCSR731COQ_counts_pattern_1.n_638-vs-GLI2-208.alignment counts-znf_b1h_alignment/GLI2-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI2-208/pos_patterns.ENCSR978EQY_ChIP_GLI2_HEK293_ENCSR731COQ_counts_pattern_2.n_358-vs-GLI2-208.alignment counts-znf_b1h_alignment/GLI2-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI2-208/pos_patterns.ENCSR978EQY_ChIP_GLI2_HEK293_ENCSR731COQ_counts_pattern_3.n_258-vs-GLI2-208.alignment counts-znf_b1h_alignment/GLI2-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI2-208/pos_patterns.ENCSR978EQY_ChIP_GLI2_HEK293_ENCSR731COQ_counts_pattern_4.n_237-vs-GLI2-208.alignment counts-znf_b1h_alignment/GLI2-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI2-208/pos_patterns.ENCSR978EQY_ChIP_GLI2_HEK293_ENCSR731COQ_counts_pattern_5.n_206-vs-GLI2-208.alignment counts-znf_b1h_alignment/GLI2-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI2-208/pos_patterns.ENCSR978EQY_ChIP_GLI2_HEK293_ENCSR731COQ_counts_pattern_6.n_23-vs-GLI2-208.alignment counts-znf_b1h_alignment/GLI2-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI2-211/pos_patterns.ENCSR978EQY_ChIP_GLI2_HEK293_ENCSR731COQ_counts_pattern_0.n_1220-vs-GLI2-211.alignment counts-znf_b1h_alignment/GLI2-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI2-211/pos_patterns.ENCSR978EQY_ChIP_GLI2_HEK293_ENCSR731COQ_counts_pattern_1.n_638-vs-GLI2-211.alignment counts-znf_b1h_alignment/GLI2-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI2-211/pos_patterns.ENCSR978EQY_ChIP_GLI2_HEK293_ENCSR731COQ_counts_pattern_2.n_358-vs-GLI2-211.alignment counts-znf_b1h_alignment/GLI2-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI2-211/pos_patterns.ENCSR978EQY_ChIP_GLI2_HEK293_ENCSR731COQ_counts_pattern_3.n_258-vs-GLI2-211.alignment counts-znf_b1h_alignment/GLI2-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI2-211/pos_patterns.ENCSR978EQY_ChIP_GLI2_HEK293_ENCSR731COQ_counts_pattern_4.n_237-vs-GLI2-211.alignment counts-znf_b1h_alignment/GLI2-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI2-211/pos_patterns.ENCSR978EQY_ChIP_GLI2_HEK293_ENCSR731COQ_counts_pattern_5.n_206-vs-GLI2-211.alignment counts-znf_b1h_alignment/GLI2-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI2-211/pos_patterns.ENCSR978EQY_ChIP_GLI2_HEK293_ENCSR731COQ_counts_pattern_6.n_23-vs-GLI2-211.alignment counts-znf_b1h_alignment/GLI2-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/Hughes_GR_models_GLI4_counts-neg.pattern_0.n_39-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/Hughes_GR_models_GLI4_counts-neg.pattern_1.n_29-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/Hughes_GR_models_GLI4_counts-neg.pattern_2.n_23-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/Hughes_GR_models_GLI4_counts-pos.pattern_0.n_90-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/Hughes_GR_models_GLI4_counts-pos.pattern_10.n_32-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/Hughes_GR_models_GLI4_counts-pos.pattern_11.n_32-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/Hughes_GR_models_GLI4_counts-pos.pattern_12.n_31-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/Hughes_GR_models_GLI4_counts-pos.pattern_13.n_25-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/Hughes_GR_models_GLI4_counts-pos.pattern_1.n_69-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/Hughes_GR_models_GLI4_counts-pos.pattern_2.n_60-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/Hughes_GR_models_GLI4_counts-pos.pattern_3.n_42-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/Hughes_GR_models_GLI4_counts-pos.pattern_4.n_37-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/Hughes_GR_models_GLI4_counts-pos.pattern_5.n_37-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/Hughes_GR_models_GLI4_counts-pos.pattern_6.n_34-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/Hughes_GR_models_GLI4_counts-pos.pattern_7.n_33-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/Hughes_GR_models_GLI4_counts-pos.pattern_8.n_33-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/Hughes_GR_models_GLI4_counts-pos.pattern_9.n_32-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/neg_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_0.n_474-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/neg_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_10.n_84-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/neg_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_11.n_77-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/neg_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_12.n_65-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/neg_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_13.n_63-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/neg_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_14.n_57-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/neg_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_15.n_55-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/neg_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_16.n_53-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/neg_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_17.n_49-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/neg_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_18.n_45-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/neg_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_19.n_44-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/neg_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_1.n_351-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/neg_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_20.n_41-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/neg_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_21.n_41-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/neg_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_22.n_41-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/neg_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_23.n_39-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/neg_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_24.n_26-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/neg_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_25.n_20-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/neg_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_2.n_273-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/neg_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_3.n_150-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/neg_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_4.n_132-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/neg_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_5.n_118-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/neg_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_6.n_113-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/neg_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_7.n_109-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/neg_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_8.n_108-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/neg_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_9.n_100-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/pos_patterns.ENCSR211PZO_ChIP_GLI4_HEK293_ENCSR285UTX_counts_pattern_0.n_692-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/pos_patterns.ENCSR211PZO_ChIP_GLI4_HEK293_ENCSR285UTX_counts_pattern_10.n_124-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/pos_patterns.ENCSR211PZO_ChIP_GLI4_HEK293_ENCSR285UTX_counts_pattern_11.n_124-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/pos_patterns.ENCSR211PZO_ChIP_GLI4_HEK293_ENCSR285UTX_counts_pattern_12.n_124-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/pos_patterns.ENCSR211PZO_ChIP_GLI4_HEK293_ENCSR285UTX_counts_pattern_13.n_111-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/pos_patterns.ENCSR211PZO_ChIP_GLI4_HEK293_ENCSR285UTX_counts_pattern_14.n_93-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/pos_patterns.ENCSR211PZO_ChIP_GLI4_HEK293_ENCSR285UTX_counts_pattern_15.n_89-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/pos_patterns.ENCSR211PZO_ChIP_GLI4_HEK293_ENCSR285UTX_counts_pattern_16.n_80-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/pos_patterns.ENCSR211PZO_ChIP_GLI4_HEK293_ENCSR285UTX_counts_pattern_17.n_59-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/pos_patterns.ENCSR211PZO_ChIP_GLI4_HEK293_ENCSR285UTX_counts_pattern_18.n_46-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/pos_patterns.ENCSR211PZO_ChIP_GLI4_HEK293_ENCSR285UTX_counts_pattern_19.n_25-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/pos_patterns.ENCSR211PZO_ChIP_GLI4_HEK293_ENCSR285UTX_counts_pattern_1.n_571-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/pos_patterns.ENCSR211PZO_ChIP_GLI4_HEK293_ENCSR285UTX_counts_pattern_20.n_25-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/pos_patterns.ENCSR211PZO_ChIP_GLI4_HEK293_ENCSR285UTX_counts_pattern_2.n_319-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/pos_patterns.ENCSR211PZO_ChIP_GLI4_HEK293_ENCSR285UTX_counts_pattern_3.n_222-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/pos_patterns.ENCSR211PZO_ChIP_GLI4_HEK293_ENCSR285UTX_counts_pattern_4.n_174-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/pos_patterns.ENCSR211PZO_ChIP_GLI4_HEK293_ENCSR285UTX_counts_pattern_5.n_166-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/pos_patterns.ENCSR211PZO_ChIP_GLI4_HEK293_ENCSR285UTX_counts_pattern_6.n_160-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/pos_patterns.ENCSR211PZO_ChIP_GLI4_HEK293_ENCSR285UTX_counts_pattern_7.n_150-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/pos_patterns.ENCSR211PZO_ChIP_GLI4_HEK293_ENCSR285UTX_counts_pattern_8.n_140-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/pos_patterns.ENCSR211PZO_ChIP_GLI4_HEK293_ENCSR285UTX_counts_pattern_9.n_136-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/pos_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_0.n_2294-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/pos_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_10.n_224-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/pos_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_11.n_219-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/pos_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_12.n_157-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/pos_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_13.n_142-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/pos_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_14.n_123-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/pos_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_15.n_109-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/pos_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_16.n_97-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/pos_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_17.n_51-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/pos_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_18.n_46-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/pos_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_19.n_46-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/pos_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_1.n_1773-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/pos_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_2.n_1519-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/pos_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_3.n_632-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/pos_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_4.n_607-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/pos_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_5.n_560-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/pos_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_6.n_374-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/pos_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_7.n_370-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/pos_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_8.n_315-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLI4-201/pos_patterns.ENCSR502YME_ChIP_GLI4_HepG2_ENCSR877ION_counts_pattern_9.n_226-vs-GLI4-201.alignment counts-znf_b1h_alignment/GLI4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLIS1-201/Hughes_GR_models_GLIS1_counts-pos.pattern_0.n_27108-vs-GLIS1-201.alignment counts-znf_b1h_alignment/GLIS1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLIS1-201/Hughes_GR_models_GLIS1_counts-pos.pattern_1.n_1832-vs-GLIS1-201.alignment counts-znf_b1h_alignment/GLIS1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLIS1-201/Hughes_GR_models_GLIS1_counts-pos.pattern_2.n_574-vs-GLIS1-201.alignment counts-znf_b1h_alignment/GLIS1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLIS1-201/Hughes_GR_models_GLIS1_counts-pos.pattern_3.n_516-vs-GLIS1-201.alignment counts-znf_b1h_alignment/GLIS1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLIS1-201/Hughes_GR_models_GLIS1_counts-pos.pattern_4.n_394-vs-GLIS1-201.alignment counts-znf_b1h_alignment/GLIS1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLIS1-201/Hughes_GR_models_GLIS1_counts-pos.pattern_5.n_357-vs-GLIS1-201.alignment counts-znf_b1h_alignment/GLIS1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLIS1-201/Hughes_GR_models_GLIS1_counts-pos.pattern_6.n_289-vs-GLIS1-201.alignment counts-znf_b1h_alignment/GLIS1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLIS1-201/Hughes_GR_models_GLIS1_counts-pos.pattern_7.n_211-vs-GLIS1-201.alignment counts-znf_b1h_alignment/GLIS1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLIS1-201/Hughes_GR_models_GLIS1_counts-pos.pattern_8.n_159-vs-GLIS1-201.alignment counts-znf_b1h_alignment/GLIS1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLIS1-201/Hughes_GR_models_GLIS1_counts-pos.pattern_9.n_20-vs-GLIS1-201.alignment counts-znf_b1h_alignment/GLIS1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLIS1-201/pos_patterns.ENCSR482BBZ_ChIP_GLIS1_HEK293_ENCSR184DFX_counts_pattern_0.n_29554-vs-GLIS1-201.alignment counts-znf_b1h_alignment/GLIS1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLIS1-201/pos_patterns.ENCSR482BBZ_ChIP_GLIS1_HEK293_ENCSR184DFX_counts_pattern_10.n_110-vs-GLIS1-201.alignment counts-znf_b1h_alignment/GLIS1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLIS1-201/pos_patterns.ENCSR482BBZ_ChIP_GLIS1_HEK293_ENCSR184DFX_counts_pattern_11.n_28-vs-GLIS1-201.alignment counts-znf_b1h_alignment/GLIS1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLIS1-201/pos_patterns.ENCSR482BBZ_ChIP_GLIS1_HEK293_ENCSR184DFX_counts_pattern_12.n_22-vs-GLIS1-201.alignment counts-znf_b1h_alignment/GLIS1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLIS1-201/pos_patterns.ENCSR482BBZ_ChIP_GLIS1_HEK293_ENCSR184DFX_counts_pattern_1.n_2577-vs-GLIS1-201.alignment counts-znf_b1h_alignment/GLIS1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLIS1-201/pos_patterns.ENCSR482BBZ_ChIP_GLIS1_HEK293_ENCSR184DFX_counts_pattern_2.n_1540-vs-GLIS1-201.alignment counts-znf_b1h_alignment/GLIS1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLIS1-201/pos_patterns.ENCSR482BBZ_ChIP_GLIS1_HEK293_ENCSR184DFX_counts_pattern_3.n_1026-vs-GLIS1-201.alignment counts-znf_b1h_alignment/GLIS1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLIS1-201/pos_patterns.ENCSR482BBZ_ChIP_GLIS1_HEK293_ENCSR184DFX_counts_pattern_4.n_638-vs-GLIS1-201.alignment counts-znf_b1h_alignment/GLIS1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLIS1-201/pos_patterns.ENCSR482BBZ_ChIP_GLIS1_HEK293_ENCSR184DFX_counts_pattern_5.n_634-vs-GLIS1-201.alignment counts-znf_b1h_alignment/GLIS1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLIS1-201/pos_patterns.ENCSR482BBZ_ChIP_GLIS1_HEK293_ENCSR184DFX_counts_pattern_6.n_395-vs-GLIS1-201.alignment counts-znf_b1h_alignment/GLIS1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLIS1-201/pos_patterns.ENCSR482BBZ_ChIP_GLIS1_HEK293_ENCSR184DFX_counts_pattern_7.n_217-vs-GLIS1-201.alignment counts-znf_b1h_alignment/GLIS1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLIS1-201/pos_patterns.ENCSR482BBZ_ChIP_GLIS1_HEK293_ENCSR184DFX_counts_pattern_8.n_149-vs-GLIS1-201.alignment counts-znf_b1h_alignment/GLIS1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLIS1-201/pos_patterns.ENCSR482BBZ_ChIP_GLIS1_HEK293_ENCSR184DFX_counts_pattern_9.n_121-vs-GLIS1-201.alignment counts-znf_b1h_alignment/GLIS1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLIS2-201/pos_patterns.ENCSR535DIA_ChIP_GLIS2_HEK293_ENCSR934MIG_counts_pattern_0.n_18297-vs-GLIS2-201.alignment counts-znf_b1h_alignment/GLIS2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLIS2-201/pos_patterns.ENCSR535DIA_ChIP_GLIS2_HEK293_ENCSR934MIG_counts_pattern_1.n_2415-vs-GLIS2-201.alignment counts-znf_b1h_alignment/GLIS2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLIS2-201/pos_patterns.ENCSR535DIA_ChIP_GLIS2_HEK293_ENCSR934MIG_counts_pattern_2.n_1774-vs-GLIS2-201.alignment counts-znf_b1h_alignment/GLIS2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GLIS2-201/pos_patterns.ENCSR535DIA_ChIP_GLIS2_HEK293_ENCSR934MIG_counts_pattern_3.n_92-vs-GLIS2-201.alignment counts-znf_b1h_alignment/GLIS2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GZF1-201/pos_patterns.ENCSR479WQX_ChIP_GZF1_HepG2_ENCSR075LRD_counts_pattern_0.n_1444-vs-GZF1-201.alignment counts-znf_b1h_alignment/GZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GZF1-201/pos_patterns.ENCSR479WQX_ChIP_GZF1_HepG2_ENCSR075LRD_counts_pattern_1.n_1428-vs-GZF1-201.alignment counts-znf_b1h_alignment/GZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GZF1-201/pos_patterns.ENCSR479WQX_ChIP_GZF1_HepG2_ENCSR075LRD_counts_pattern_2.n_1140-vs-GZF1-201.alignment counts-znf_b1h_alignment/GZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GZF1-201/pos_patterns.ENCSR479WQX_ChIP_GZF1_HepG2_ENCSR075LRD_counts_pattern_3.n_1042-vs-GZF1-201.alignment counts-znf_b1h_alignment/GZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GZF1-201/pos_patterns.ENCSR479WQX_ChIP_GZF1_HepG2_ENCSR075LRD_counts_pattern_4.n_203-vs-GZF1-201.alignment counts-znf_b1h_alignment/GZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GZF1-201/pos_patterns.ENCSR479WQX_ChIP_GZF1_HepG2_ENCSR075LRD_counts_pattern_5.n_65-vs-GZF1-201.alignment counts-znf_b1h_alignment/GZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GZF1-201/pos_patterns.ENCSR479WQX_ChIP_GZF1_HepG2_ENCSR075LRD_counts_pattern_6.n_23-vs-GZF1-201.alignment counts-znf_b1h_alignment/GZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/GZF1-201/pos_patterns.ENCSR479WQX_ChIP_GZF1_HepG2_ENCSR075LRD_counts_pattern_7.n_23-vs-GZF1-201.alignment counts-znf_b1h_alignment/GZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIC1-201/pos_patterns.ENCSR803GYT_ChIP_HIC1_HEK293_ENCSR970AAN_counts_pattern_0.n_3995-vs-HIC1-201.alignment counts-znf_b1h_alignment/HIC1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIC1-201/pos_patterns.ENCSR803GYT_ChIP_HIC1_HEK293_ENCSR970AAN_counts_pattern_10.n_131-vs-HIC1-201.alignment counts-znf_b1h_alignment/HIC1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIC1-201/pos_patterns.ENCSR803GYT_ChIP_HIC1_HEK293_ENCSR970AAN_counts_pattern_11.n_120-vs-HIC1-201.alignment counts-znf_b1h_alignment/HIC1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIC1-201/pos_patterns.ENCSR803GYT_ChIP_HIC1_HEK293_ENCSR970AAN_counts_pattern_12.n_115-vs-HIC1-201.alignment counts-znf_b1h_alignment/HIC1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIC1-201/pos_patterns.ENCSR803GYT_ChIP_HIC1_HEK293_ENCSR970AAN_counts_pattern_13.n_109-vs-HIC1-201.alignment counts-znf_b1h_alignment/HIC1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIC1-201/pos_patterns.ENCSR803GYT_ChIP_HIC1_HEK293_ENCSR970AAN_counts_pattern_14.n_103-vs-HIC1-201.alignment counts-znf_b1h_alignment/HIC1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIC1-201/pos_patterns.ENCSR803GYT_ChIP_HIC1_HEK293_ENCSR970AAN_counts_pattern_15.n_86-vs-HIC1-201.alignment counts-znf_b1h_alignment/HIC1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIC1-201/pos_patterns.ENCSR803GYT_ChIP_HIC1_HEK293_ENCSR970AAN_counts_pattern_16.n_81-vs-HIC1-201.alignment counts-znf_b1h_alignment/HIC1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIC1-201/pos_patterns.ENCSR803GYT_ChIP_HIC1_HEK293_ENCSR970AAN_counts_pattern_17.n_78-vs-HIC1-201.alignment counts-znf_b1h_alignment/HIC1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIC1-201/pos_patterns.ENCSR803GYT_ChIP_HIC1_HEK293_ENCSR970AAN_counts_pattern_18.n_66-vs-HIC1-201.alignment counts-znf_b1h_alignment/HIC1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIC1-201/pos_patterns.ENCSR803GYT_ChIP_HIC1_HEK293_ENCSR970AAN_counts_pattern_19.n_63-vs-HIC1-201.alignment counts-znf_b1h_alignment/HIC1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIC1-201/pos_patterns.ENCSR803GYT_ChIP_HIC1_HEK293_ENCSR970AAN_counts_pattern_1.n_3339-vs-HIC1-201.alignment counts-znf_b1h_alignment/HIC1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIC1-201/pos_patterns.ENCSR803GYT_ChIP_HIC1_HEK293_ENCSR970AAN_counts_pattern_20.n_21-vs-HIC1-201.alignment counts-znf_b1h_alignment/HIC1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIC1-201/pos_patterns.ENCSR803GYT_ChIP_HIC1_HEK293_ENCSR970AAN_counts_pattern_2.n_2428-vs-HIC1-201.alignment counts-znf_b1h_alignment/HIC1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIC1-201/pos_patterns.ENCSR803GYT_ChIP_HIC1_HEK293_ENCSR970AAN_counts_pattern_3.n_627-vs-HIC1-201.alignment counts-znf_b1h_alignment/HIC1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIC1-201/pos_patterns.ENCSR803GYT_ChIP_HIC1_HEK293_ENCSR970AAN_counts_pattern_4.n_524-vs-HIC1-201.alignment counts-znf_b1h_alignment/HIC1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIC1-201/pos_patterns.ENCSR803GYT_ChIP_HIC1_HEK293_ENCSR970AAN_counts_pattern_5.n_397-vs-HIC1-201.alignment counts-znf_b1h_alignment/HIC1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIC1-201/pos_patterns.ENCSR803GYT_ChIP_HIC1_HEK293_ENCSR970AAN_counts_pattern_6.n_296-vs-HIC1-201.alignment counts-znf_b1h_alignment/HIC1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIC1-201/pos_patterns.ENCSR803GYT_ChIP_HIC1_HEK293_ENCSR970AAN_counts_pattern_7.n_221-vs-HIC1-201.alignment counts-znf_b1h_alignment/HIC1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIC1-201/pos_patterns.ENCSR803GYT_ChIP_HIC1_HEK293_ENCSR970AAN_counts_pattern_8.n_203-vs-HIC1-201.alignment counts-znf_b1h_alignment/HIC1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIC1-201/pos_patterns.ENCSR803GYT_ChIP_HIC1_HEK293_ENCSR970AAN_counts_pattern_9.n_194-vs-HIC1-201.alignment counts-znf_b1h_alignment/HIC1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-201/neg_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_0.n_104-vs-HINFP-201.alignment counts-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-201/neg_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_1.n_37-vs-HINFP-201.alignment counts-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_counts_pattern_0.n_1405-vs-HINFP-201.alignment counts-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_counts_pattern_1.n_1308-vs-HINFP-201.alignment counts-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_counts_pattern_2.n_1289-vs-HINFP-201.alignment counts-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_counts_pattern_3.n_1213-vs-HINFP-201.alignment counts-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_counts_pattern_4.n_66-vs-HINFP-201.alignment counts-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_0.n_3372-vs-HINFP-201.alignment counts-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_10.n_298-vs-HINFP-201.alignment counts-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_11.n_272-vs-HINFP-201.alignment counts-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_12.n_257-vs-HINFP-201.alignment counts-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_13.n_210-vs-HINFP-201.alignment counts-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_14.n_202-vs-HINFP-201.alignment counts-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_15.n_167-vs-HINFP-201.alignment counts-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_16.n_157-vs-HINFP-201.alignment counts-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_17.n_153-vs-HINFP-201.alignment counts-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_18.n_91-vs-HINFP-201.alignment counts-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_19.n_91-vs-HINFP-201.alignment counts-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_1.n_905-vs-HINFP-201.alignment counts-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_20.n_63-vs-HINFP-201.alignment counts-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_21.n_32-vs-HINFP-201.alignment counts-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_2.n_658-vs-HINFP-201.alignment counts-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_3.n_573-vs-HINFP-201.alignment counts-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_4.n_552-vs-HINFP-201.alignment counts-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_5.n_416-vs-HINFP-201.alignment counts-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_6.n_403-vs-HINFP-201.alignment counts-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_7.n_317-vs-HINFP-201.alignment counts-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_8.n_317-vs-HINFP-201.alignment counts-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_9.n_316-vs-HINFP-201.alignment counts-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-205/neg_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_0.n_104-vs-HINFP-205.alignment counts-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-205/neg_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_1.n_37-vs-HINFP-205.alignment counts-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_counts_pattern_0.n_1405-vs-HINFP-205.alignment counts-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_counts_pattern_1.n_1308-vs-HINFP-205.alignment counts-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_counts_pattern_2.n_1289-vs-HINFP-205.alignment counts-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_counts_pattern_3.n_1213-vs-HINFP-205.alignment counts-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_counts_pattern_4.n_66-vs-HINFP-205.alignment counts-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_0.n_3372-vs-HINFP-205.alignment counts-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_10.n_298-vs-HINFP-205.alignment counts-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_11.n_272-vs-HINFP-205.alignment counts-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_12.n_257-vs-HINFP-205.alignment counts-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_13.n_210-vs-HINFP-205.alignment counts-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_14.n_202-vs-HINFP-205.alignment counts-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_15.n_167-vs-HINFP-205.alignment counts-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_16.n_157-vs-HINFP-205.alignment counts-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_17.n_153-vs-HINFP-205.alignment counts-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_18.n_91-vs-HINFP-205.alignment counts-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_19.n_91-vs-HINFP-205.alignment counts-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_1.n_905-vs-HINFP-205.alignment counts-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_20.n_63-vs-HINFP-205.alignment counts-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_21.n_32-vs-HINFP-205.alignment counts-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_2.n_658-vs-HINFP-205.alignment counts-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_3.n_573-vs-HINFP-205.alignment counts-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_4.n_552-vs-HINFP-205.alignment counts-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_5.n_416-vs-HINFP-205.alignment counts-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_6.n_403-vs-HINFP-205.alignment counts-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_7.n_317-vs-HINFP-205.alignment counts-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_8.n_317-vs-HINFP-205.alignment counts-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_counts_pattern_9.n_316-vs-HINFP-205.alignment counts-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIVEP1-201/neg_patterns.ENCSR697WMX_ChIP_HIVEP1_HepG2_ENCSR272FZX_counts_pattern_0.n_93-vs-HIVEP1-201.alignment counts-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIVEP1-201/neg_patterns.ENCSR697WMX_ChIP_HIVEP1_HepG2_ENCSR272FZX_counts_pattern_1.n_78-vs-HIVEP1-201.alignment counts-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIVEP1-201/neg_patterns.ENCSR697WMX_ChIP_HIVEP1_HepG2_ENCSR272FZX_counts_pattern_2.n_65-vs-HIVEP1-201.alignment counts-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIVEP1-201/neg_patterns.ENCSR697WMX_ChIP_HIVEP1_HepG2_ENCSR272FZX_counts_pattern_3.n_40-vs-HIVEP1-201.alignment counts-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIVEP1-201/neg_patterns.ENCSR697WMX_ChIP_HIVEP1_HepG2_ENCSR272FZX_counts_pattern_4.n_38-vs-HIVEP1-201.alignment counts-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIVEP1-201/neg_patterns.ENCSR697WMX_ChIP_HIVEP1_HepG2_ENCSR272FZX_counts_pattern_5.n_27-vs-HIVEP1-201.alignment counts-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIVEP1-201/neg_patterns.ENCSR947PJZ_ChIP_HIVEP1_K562_ENCSR034TCM_counts_pattern_0.n_28-vs-HIVEP1-201.alignment counts-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIVEP1-201/neg_patterns.ENCSR947PJZ_ChIP_HIVEP1_K562_ENCSR034TCM_counts_pattern_1.n_27-vs-HIVEP1-201.alignment counts-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIVEP1-201/pos_patterns.ENCSR697WMX_ChIP_HIVEP1_HepG2_ENCSR272FZX_counts_pattern_0.n_2056-vs-HIVEP1-201.alignment counts-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIVEP1-201/pos_patterns.ENCSR697WMX_ChIP_HIVEP1_HepG2_ENCSR272FZX_counts_pattern_10.n_271-vs-HIVEP1-201.alignment counts-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIVEP1-201/pos_patterns.ENCSR697WMX_ChIP_HIVEP1_HepG2_ENCSR272FZX_counts_pattern_11.n_159-vs-HIVEP1-201.alignment counts-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIVEP1-201/pos_patterns.ENCSR697WMX_ChIP_HIVEP1_HepG2_ENCSR272FZX_counts_pattern_12.n_154-vs-HIVEP1-201.alignment counts-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIVEP1-201/pos_patterns.ENCSR697WMX_ChIP_HIVEP1_HepG2_ENCSR272FZX_counts_pattern_13.n_114-vs-HIVEP1-201.alignment counts-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIVEP1-201/pos_patterns.ENCSR697WMX_ChIP_HIVEP1_HepG2_ENCSR272FZX_counts_pattern_14.n_95-vs-HIVEP1-201.alignment counts-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIVEP1-201/pos_patterns.ENCSR697WMX_ChIP_HIVEP1_HepG2_ENCSR272FZX_counts_pattern_15.n_94-vs-HIVEP1-201.alignment counts-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIVEP1-201/pos_patterns.ENCSR697WMX_ChIP_HIVEP1_HepG2_ENCSR272FZX_counts_pattern_16.n_85-vs-HIVEP1-201.alignment counts-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIVEP1-201/pos_patterns.ENCSR697WMX_ChIP_HIVEP1_HepG2_ENCSR272FZX_counts_pattern_17.n_60-vs-HIVEP1-201.alignment counts-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIVEP1-201/pos_patterns.ENCSR697WMX_ChIP_HIVEP1_HepG2_ENCSR272FZX_counts_pattern_18.n_51-vs-HIVEP1-201.alignment counts-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIVEP1-201/pos_patterns.ENCSR697WMX_ChIP_HIVEP1_HepG2_ENCSR272FZX_counts_pattern_19.n_47-vs-HIVEP1-201.alignment counts-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIVEP1-201/pos_patterns.ENCSR697WMX_ChIP_HIVEP1_HepG2_ENCSR272FZX_counts_pattern_1.n_1597-vs-HIVEP1-201.alignment counts-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIVEP1-201/pos_patterns.ENCSR697WMX_ChIP_HIVEP1_HepG2_ENCSR272FZX_counts_pattern_20.n_42-vs-HIVEP1-201.alignment counts-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIVEP1-201/pos_patterns.ENCSR697WMX_ChIP_HIVEP1_HepG2_ENCSR272FZX_counts_pattern_21.n_41-vs-HIVEP1-201.alignment counts-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIVEP1-201/pos_patterns.ENCSR697WMX_ChIP_HIVEP1_HepG2_ENCSR272FZX_counts_pattern_22.n_24-vs-HIVEP1-201.alignment counts-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIVEP1-201/pos_patterns.ENCSR697WMX_ChIP_HIVEP1_HepG2_ENCSR272FZX_counts_pattern_2.n_1387-vs-HIVEP1-201.alignment counts-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIVEP1-201/pos_patterns.ENCSR697WMX_ChIP_HIVEP1_HepG2_ENCSR272FZX_counts_pattern_3.n_1212-vs-HIVEP1-201.alignment counts-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIVEP1-201/pos_patterns.ENCSR697WMX_ChIP_HIVEP1_HepG2_ENCSR272FZX_counts_pattern_4.n_1034-vs-HIVEP1-201.alignment counts-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIVEP1-201/pos_patterns.ENCSR697WMX_ChIP_HIVEP1_HepG2_ENCSR272FZX_counts_pattern_5.n_542-vs-HIVEP1-201.alignment counts-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIVEP1-201/pos_patterns.ENCSR697WMX_ChIP_HIVEP1_HepG2_ENCSR272FZX_counts_pattern_6.n_518-vs-HIVEP1-201.alignment counts-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIVEP1-201/pos_patterns.ENCSR697WMX_ChIP_HIVEP1_HepG2_ENCSR272FZX_counts_pattern_7.n_451-vs-HIVEP1-201.alignment counts-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIVEP1-201/pos_patterns.ENCSR697WMX_ChIP_HIVEP1_HepG2_ENCSR272FZX_counts_pattern_8.n_380-vs-HIVEP1-201.alignment counts-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIVEP1-201/pos_patterns.ENCSR697WMX_ChIP_HIVEP1_HepG2_ENCSR272FZX_counts_pattern_9.n_344-vs-HIVEP1-201.alignment counts-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIVEP1-201/pos_patterns.ENCSR947PJZ_ChIP_HIVEP1_K562_ENCSR034TCM_counts_pattern_0.n_1117-vs-HIVEP1-201.alignment counts-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIVEP1-201/pos_patterns.ENCSR947PJZ_ChIP_HIVEP1_K562_ENCSR034TCM_counts_pattern_1.n_469-vs-HIVEP1-201.alignment counts-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIVEP1-201/pos_patterns.ENCSR947PJZ_ChIP_HIVEP1_K562_ENCSR034TCM_counts_pattern_2.n_91-vs-HIVEP1-201.alignment counts-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIVEP1-201/pos_patterns.ENCSR947PJZ_ChIP_HIVEP1_K562_ENCSR034TCM_counts_pattern_3.n_91-vs-HIVEP1-201.alignment counts-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIVEP1-201/pos_patterns.ENCSR947PJZ_ChIP_HIVEP1_K562_ENCSR034TCM_counts_pattern_4.n_72-vs-HIVEP1-201.alignment counts-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIVEP1-201/pos_patterns.ENCSR947PJZ_ChIP_HIVEP1_K562_ENCSR034TCM_counts_pattern_5.n_67-vs-HIVEP1-201.alignment counts-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIVEP1-201/pos_patterns.ENCSR947PJZ_ChIP_HIVEP1_K562_ENCSR034TCM_counts_pattern_6.n_55-vs-HIVEP1-201.alignment counts-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIVEP1-201/pos_patterns.ENCSR947PJZ_ChIP_HIVEP1_K562_ENCSR034TCM_counts_pattern_7.n_49-vs-HIVEP1-201.alignment counts-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HIVEP1-201/pos_patterns.ENCSR947PJZ_ChIP_HIVEP1_K562_ENCSR034TCM_counts_pattern_8.n_33-vs-HIVEP1-201.alignment counts-znf_b1h_alignment/HIVEP1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/HKR1-201/ChipExo_models_HKR1_counts-pos.pattern_1.n_210-vs-HKR1-201.alignment counts-znf_b1h_alignment/HKR1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_0.n_2113-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_2.n_1458-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_3.n_1296-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_4.n_1278-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_5.n_437-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_8.n_20-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_10.n_44-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_1.n_222-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_2.n_189-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_3.n_166-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_5.n_115-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_6.n_90-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_7.n_77-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_8.n_65-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_9.n_44-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_0.n_9393-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_10.n_932-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_11.n_859-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_12.n_811-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_13.n_774-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_14.n_584-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_15.n_544-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_16.n_492-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_17.n_485-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_18.n_473-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_19.n_363-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_1.n_4208-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_20.n_358-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_21.n_241-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_22.n_164-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_23.n_156-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_24.n_100-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_26.n_65-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_28.n_28-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_4.n_1932-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_5.n_1894-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_6.n_1734-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_7.n_1468-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_8.n_1219-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_9.n_1044-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_0.n_7359-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_10.n_600-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_11.n_575-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_12.n_474-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_13.n_217-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_14.n_89-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_15.n_46-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_16.n_36-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_17.n_33-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_18.n_31-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_19.n_30-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_1.n_5654-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_21.n_24-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_22.n_20-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_23.n_20-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_2.n_5140-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_4.n_4760-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_5.n_3615-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_6.n_1523-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_7.n_1177-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_8.n_783-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_9.n_779-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_0.n_7231-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_10.n_116-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_11.n_79-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_12.n_72-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_13.n_46-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_14.n_44-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_15.n_40-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_16.n_30-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_17.n_26-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_1.n_6937-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_2.n_6601-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_3.n_6435-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_4.n_4823-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_5.n_4612-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_6.n_1403-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_7.n_588-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_8.n_453-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_0.n_10257-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_10.n_1074-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_11.n_615-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_12.n_518-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_13.n_432-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_15.n_316-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_16.n_286-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_17.n_275-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_18.n_252-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_19.n_250-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_1.n_2984-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_20.n_226-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_22.n_125-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_23.n_113-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_24.n_93-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_25.n_62-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_26.n_52-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_27.n_41-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_29.n_33-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_2.n_2814-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_33.n_20-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_3.n_2129-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_4.n_1656-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_5.n_1636-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_6.n_1614-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_7.n_1501-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_8.n_1463-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-201/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_9.n_1310-vs-IKZF1-201.alignment counts-znf_b1h_alignment/IKZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_0.n_2113-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_1.n_2013-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_2.n_1458-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_3.n_1296-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_4.n_1278-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_5.n_437-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_6.n_357-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_7.n_51-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_8.n_20-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_0.n_417-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_10.n_44-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_1.n_222-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_2.n_189-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_3.n_166-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_4.n_121-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_5.n_115-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_6.n_90-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_7.n_77-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_8.n_65-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_9.n_44-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_0.n_9393-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_10.n_932-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_11.n_859-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_12.n_811-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_13.n_774-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_15.n_544-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_16.n_492-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_17.n_485-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_18.n_473-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_19.n_363-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_22.n_164-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_23.n_156-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_24.n_100-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_25.n_87-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_26.n_65-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_27.n_59-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_28.n_28-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_29.n_25-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_2.n_3363-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_30.n_24-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_31.n_23-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_3.n_2080-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_4.n_1932-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_5.n_1894-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_6.n_1734-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_7.n_1468-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_8.n_1219-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_9.n_1044-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_0.n_7359-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_10.n_600-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_11.n_575-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_12.n_474-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_13.n_217-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_14.n_89-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_15.n_46-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_16.n_36-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_17.n_33-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_18.n_31-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_19.n_30-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_1.n_5654-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_20.n_25-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_21.n_24-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_22.n_20-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_23.n_20-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_2.n_5140-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_3.n_4988-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_4.n_4760-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_5.n_3615-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_6.n_1523-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_7.n_1177-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_8.n_783-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_9.n_779-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_0.n_7231-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_10.n_116-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_11.n_79-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_12.n_72-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_13.n_46-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_14.n_44-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_15.n_40-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_16.n_30-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_17.n_26-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_1.n_6937-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_2.n_6601-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_3.n_6435-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_4.n_4823-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_5.n_4612-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_6.n_1403-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_7.n_588-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_8.n_453-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_9.n_322-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_0.n_10257-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_10.n_1074-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_11.n_615-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_12.n_518-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_13.n_432-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_14.n_371-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_15.n_316-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_16.n_286-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_17.n_275-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_18.n_252-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_19.n_250-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_1.n_2984-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_20.n_226-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_21.n_142-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_22.n_125-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_23.n_113-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_24.n_93-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_25.n_62-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_26.n_52-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_27.n_41-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_28.n_40-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_29.n_33-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_2.n_2814-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_30.n_27-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_31.n_24-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_32.n_23-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_33.n_20-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_3.n_2129-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_4.n_1656-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_5.n_1636-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_6.n_1614-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_7.n_1501-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_8.n_1463-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-203/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_9.n_1310-vs-IKZF1-203.alignment counts-znf_b1h_alignment/IKZF1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_0.n_2113-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_1.n_2013-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_2.n_1458-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_3.n_1296-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_4.n_1278-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_5.n_437-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_6.n_357-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_7.n_51-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_8.n_20-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_0.n_417-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_10.n_44-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_1.n_222-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_2.n_189-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_3.n_166-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_4.n_121-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_5.n_115-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_6.n_90-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_7.n_77-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_8.n_65-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_9.n_44-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_0.n_9393-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_10.n_932-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_11.n_859-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_12.n_811-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_13.n_774-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_14.n_584-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_15.n_544-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_16.n_492-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_17.n_485-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_18.n_473-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_19.n_363-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_1.n_4208-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_20.n_358-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_21.n_241-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_22.n_164-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_23.n_156-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_24.n_100-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_25.n_87-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_26.n_65-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_27.n_59-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_28.n_28-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_29.n_25-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_2.n_3363-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_30.n_24-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_31.n_23-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_3.n_2080-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_4.n_1932-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_5.n_1894-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_6.n_1734-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_7.n_1468-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_8.n_1219-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_9.n_1044-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_0.n_7359-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_10.n_600-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_11.n_575-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_12.n_474-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_13.n_217-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_14.n_89-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_15.n_46-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_16.n_36-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_17.n_33-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_18.n_31-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_19.n_30-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_1.n_5654-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_20.n_25-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_21.n_24-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_22.n_20-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_23.n_20-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_2.n_5140-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_3.n_4988-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_4.n_4760-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_5.n_3615-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_6.n_1523-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_7.n_1177-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_8.n_783-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_9.n_779-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_0.n_7231-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_10.n_116-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_11.n_79-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_12.n_72-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_13.n_46-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_14.n_44-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_15.n_40-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_16.n_30-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_17.n_26-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_1.n_6937-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_2.n_6601-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_3.n_6435-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_4.n_4823-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_5.n_4612-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_6.n_1403-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_7.n_588-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_8.n_453-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_9.n_322-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_0.n_10257-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_10.n_1074-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_11.n_615-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_12.n_518-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_13.n_432-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_14.n_371-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_15.n_316-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_16.n_286-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_17.n_275-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_18.n_252-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_19.n_250-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_1.n_2984-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_20.n_226-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_21.n_142-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_22.n_125-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_23.n_113-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_24.n_93-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_25.n_62-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_26.n_52-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_27.n_41-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_28.n_40-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_29.n_33-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_2.n_2814-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_30.n_27-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_31.n_24-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_32.n_23-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_33.n_20-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_3.n_2129-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_4.n_1656-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_5.n_1636-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_6.n_1614-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_7.n_1501-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_8.n_1463-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-210/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_9.n_1310-vs-IKZF1-210.alignment counts-znf_b1h_alignment/IKZF1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_0.n_2113-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_1.n_2013-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_2.n_1458-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_3.n_1296-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_4.n_1278-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_5.n_437-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_6.n_357-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_7.n_51-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_8.n_20-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_0.n_417-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_10.n_44-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_1.n_222-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_2.n_189-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_3.n_166-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_4.n_121-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_5.n_115-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_6.n_90-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_7.n_77-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_8.n_65-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_9.n_44-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_0.n_9393-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_10.n_932-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_11.n_859-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_12.n_811-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_13.n_774-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_14.n_584-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_15.n_544-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_16.n_492-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_17.n_485-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_18.n_473-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_19.n_363-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_1.n_4208-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_20.n_358-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_21.n_241-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_22.n_164-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_23.n_156-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_24.n_100-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_25.n_87-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_26.n_65-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_27.n_59-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_28.n_28-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_29.n_25-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_2.n_3363-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_30.n_24-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_31.n_23-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_3.n_2080-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_4.n_1932-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_5.n_1894-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_6.n_1734-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_7.n_1468-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_8.n_1219-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_9.n_1044-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_0.n_7359-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_10.n_600-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_11.n_575-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_12.n_474-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_13.n_217-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_14.n_89-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_15.n_46-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_16.n_36-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_17.n_33-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_18.n_31-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_19.n_30-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_1.n_5654-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_20.n_25-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_21.n_24-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_22.n_20-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_23.n_20-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_2.n_5140-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_3.n_4988-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_4.n_4760-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_5.n_3615-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_6.n_1523-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_7.n_1177-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_8.n_783-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_9.n_779-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_0.n_7231-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_10.n_116-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_11.n_79-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_12.n_72-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_13.n_46-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_14.n_44-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_15.n_40-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_16.n_30-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_17.n_26-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_1.n_6937-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_2.n_6601-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_3.n_6435-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_4.n_4823-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_5.n_4612-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_6.n_1403-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_7.n_588-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_8.n_453-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_9.n_322-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_0.n_10257-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_10.n_1074-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_11.n_615-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_12.n_518-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_13.n_432-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_14.n_371-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_15.n_316-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_16.n_286-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_17.n_275-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_18.n_252-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_19.n_250-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_1.n_2984-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_20.n_226-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_21.n_142-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_22.n_125-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_23.n_113-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_24.n_93-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_25.n_62-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_26.n_52-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_27.n_41-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_28.n_40-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_29.n_33-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_2.n_2814-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_30.n_27-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_31.n_24-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_32.n_23-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_33.n_20-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_3.n_2129-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_4.n_1656-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_5.n_1636-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_6.n_1614-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_7.n_1501-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_8.n_1463-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-211/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_9.n_1310-vs-IKZF1-211.alignment counts-znf_b1h_alignment/IKZF1-211/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_0.n_2113-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_1.n_2013-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_2.n_1458-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_3.n_1296-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_4.n_1278-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_5.n_437-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_6.n_357-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_7.n_51-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_8.n_20-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_0.n_417-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_10.n_44-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_1.n_222-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_2.n_189-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_3.n_166-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_4.n_121-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_5.n_115-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_6.n_90-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_7.n_77-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_8.n_65-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_9.n_44-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_0.n_9393-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_10.n_932-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_11.n_859-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_12.n_811-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_13.n_774-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_14.n_584-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_15.n_544-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_16.n_492-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_17.n_485-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_18.n_473-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_19.n_363-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_1.n_4208-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_20.n_358-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_21.n_241-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_22.n_164-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_23.n_156-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_24.n_100-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_25.n_87-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_26.n_65-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_27.n_59-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_28.n_28-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_29.n_25-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_2.n_3363-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_30.n_24-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_31.n_23-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_3.n_2080-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_4.n_1932-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_5.n_1894-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_6.n_1734-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_7.n_1468-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_8.n_1219-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_9.n_1044-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_0.n_7359-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_10.n_600-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_11.n_575-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_12.n_474-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_13.n_217-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_14.n_89-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_15.n_46-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_16.n_36-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_17.n_33-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_18.n_31-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_19.n_30-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_1.n_5654-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_20.n_25-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_21.n_24-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_22.n_20-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_23.n_20-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_2.n_5140-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_3.n_4988-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_4.n_4760-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_5.n_3615-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_6.n_1523-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_7.n_1177-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_8.n_783-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_9.n_779-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_0.n_7231-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_10.n_116-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_11.n_79-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_12.n_72-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_13.n_46-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_14.n_44-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_15.n_40-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_16.n_30-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_17.n_26-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_1.n_6937-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_2.n_6601-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_3.n_6435-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_4.n_4823-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_5.n_4612-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_6.n_1403-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_7.n_588-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_8.n_453-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_9.n_322-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_0.n_10257-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_10.n_1074-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_11.n_615-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_12.n_518-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_13.n_432-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_14.n_371-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_15.n_316-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_16.n_286-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_17.n_275-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_18.n_252-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_19.n_250-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_1.n_2984-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_20.n_226-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_21.n_142-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_22.n_125-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_23.n_113-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_24.n_93-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_25.n_62-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_26.n_52-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_27.n_41-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_28.n_40-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_29.n_33-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_2.n_2814-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_30.n_27-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_31.n_24-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_32.n_23-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_33.n_20-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_3.n_2129-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_4.n_1656-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_5.n_1636-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_6.n_1614-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_7.n_1501-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_8.n_1463-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-217/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_9.n_1310-vs-IKZF1-217.alignment counts-znf_b1h_alignment/IKZF1-217/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_0.n_2113-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_1.n_2013-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_2.n_1458-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_3.n_1296-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_4.n_1278-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_5.n_437-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_6.n_357-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_7.n_51-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR000EUJ_ChIP_IKZF1_GM12878_ENCSR920YZT_counts_pattern_8.n_20-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_0.n_417-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_10.n_44-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_1.n_222-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_2.n_189-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_3.n_166-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_4.n_121-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_5.n_115-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_6.n_90-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_7.n_77-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_8.n_65-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR278JQG_ChIP_IKZF1_HepG2_ENCSR642JLT_counts_pattern_9.n_44-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_0.n_9393-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_10.n_932-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_11.n_859-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_12.n_811-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_13.n_774-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_14.n_584-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_15.n_544-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_16.n_492-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_17.n_485-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_18.n_473-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_19.n_363-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_1.n_4208-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_20.n_358-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_21.n_241-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_22.n_164-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_23.n_156-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_24.n_100-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_25.n_87-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_26.n_65-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_27.n_59-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_28.n_28-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_29.n_25-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_2.n_3363-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_30.n_24-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_31.n_23-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_3.n_2080-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_4.n_1932-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_5.n_1894-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_6.n_1734-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_7.n_1468-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_8.n_1219-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR395HWC_ChIP_IKZF1_K562_ENCSR740JNL_counts_pattern_9.n_1044-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_0.n_7359-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_10.n_600-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_11.n_575-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_12.n_474-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_13.n_217-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_14.n_89-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_15.n_46-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_16.n_36-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_17.n_33-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_18.n_31-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_19.n_30-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_1.n_5654-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_20.n_25-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_21.n_24-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_22.n_20-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_23.n_20-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_2.n_5140-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_3.n_4988-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_4.n_4760-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_5.n_3615-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_6.n_1523-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_7.n_1177-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_8.n_783-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR441VHN_ChIP_IKZF1_GM12878_ENCSR142BYT_counts_pattern_9.n_779-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_0.n_7231-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_10.n_116-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_11.n_79-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_12.n_72-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_13.n_46-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_14.n_44-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_15.n_40-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_16.n_30-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_17.n_26-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_1.n_6937-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_2.n_6601-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_3.n_6435-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_4.n_4823-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_5.n_4612-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_6.n_1403-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_7.n_588-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_8.n_453-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR874AFU_ChIP_IKZF1_GM12878_ENCSR199HXS_counts_pattern_9.n_322-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_0.n_10257-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_10.n_1074-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_11.n_615-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_12.n_518-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_13.n_432-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_14.n_371-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_15.n_316-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_16.n_286-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_17.n_275-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_18.n_252-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_19.n_250-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_1.n_2984-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_20.n_226-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_21.n_142-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_22.n_125-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_23.n_113-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_24.n_93-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_25.n_62-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_26.n_52-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_27.n_41-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_28.n_40-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_29.n_33-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_2.n_2814-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_30.n_27-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_31.n_24-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_32.n_23-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_33.n_20-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_3.n_2129-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_4.n_1656-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_5.n_1636-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_6.n_1614-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_7.n_1501-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_8.n_1463-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF1-218/pos_patterns.ENCSR948VFL_ChIP_IKZF1_K562_ENCSR167KIF_counts_pattern_9.n_1310-vs-IKZF1-218.alignment counts-znf_b1h_alignment/IKZF1-218/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-201/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_0.n_6023-vs-IKZF2-201.alignment counts-znf_b1h_alignment/IKZF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-201/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_10.n_83-vs-IKZF2-201.alignment counts-znf_b1h_alignment/IKZF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-201/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_11.n_79-vs-IKZF2-201.alignment counts-znf_b1h_alignment/IKZF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-201/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_12.n_75-vs-IKZF2-201.alignment counts-znf_b1h_alignment/IKZF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-201/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_13.n_64-vs-IKZF2-201.alignment counts-znf_b1h_alignment/IKZF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-201/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_14.n_62-vs-IKZF2-201.alignment counts-znf_b1h_alignment/IKZF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-201/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_15.n_34-vs-IKZF2-201.alignment counts-znf_b1h_alignment/IKZF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-201/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_16.n_34-vs-IKZF2-201.alignment counts-znf_b1h_alignment/IKZF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-201/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_17.n_28-vs-IKZF2-201.alignment counts-znf_b1h_alignment/IKZF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-201/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_18.n_27-vs-IKZF2-201.alignment counts-znf_b1h_alignment/IKZF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-201/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_1.n_5128-vs-IKZF2-201.alignment counts-znf_b1h_alignment/IKZF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-201/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_2.n_4914-vs-IKZF2-201.alignment counts-znf_b1h_alignment/IKZF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-201/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_3.n_4426-vs-IKZF2-201.alignment counts-znf_b1h_alignment/IKZF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-201/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_4.n_4343-vs-IKZF2-201.alignment counts-znf_b1h_alignment/IKZF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-201/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_5.n_2351-vs-IKZF2-201.alignment counts-znf_b1h_alignment/IKZF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-201/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_6.n_1244-vs-IKZF2-201.alignment counts-znf_b1h_alignment/IKZF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-201/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_7.n_480-vs-IKZF2-201.alignment counts-znf_b1h_alignment/IKZF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-201/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_8.n_415-vs-IKZF2-201.alignment counts-znf_b1h_alignment/IKZF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-201/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_9.n_345-vs-IKZF2-201.alignment counts-znf_b1h_alignment/IKZF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-201/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_0.n_7891-vs-IKZF2-201.alignment counts-znf_b1h_alignment/IKZF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-201/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_10.n_149-vs-IKZF2-201.alignment counts-znf_b1h_alignment/IKZF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-201/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_11.n_96-vs-IKZF2-201.alignment counts-znf_b1h_alignment/IKZF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-201/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_12.n_36-vs-IKZF2-201.alignment counts-znf_b1h_alignment/IKZF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-201/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_13.n_35-vs-IKZF2-201.alignment counts-znf_b1h_alignment/IKZF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-201/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_14.n_25-vs-IKZF2-201.alignment counts-znf_b1h_alignment/IKZF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-201/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_15.n_22-vs-IKZF2-201.alignment counts-znf_b1h_alignment/IKZF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-201/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_16.n_21-vs-IKZF2-201.alignment counts-znf_b1h_alignment/IKZF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-201/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_17.n_21-vs-IKZF2-201.alignment counts-znf_b1h_alignment/IKZF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-201/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_1.n_6361-vs-IKZF2-201.alignment counts-znf_b1h_alignment/IKZF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-201/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_2.n_5442-vs-IKZF2-201.alignment counts-znf_b1h_alignment/IKZF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-201/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_3.n_5132-vs-IKZF2-201.alignment counts-znf_b1h_alignment/IKZF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-201/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_4.n_4888-vs-IKZF2-201.alignment counts-znf_b1h_alignment/IKZF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-201/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_5.n_3460-vs-IKZF2-201.alignment counts-znf_b1h_alignment/IKZF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-201/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_6.n_1817-vs-IKZF2-201.alignment counts-znf_b1h_alignment/IKZF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-201/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_7.n_955-vs-IKZF2-201.alignment counts-znf_b1h_alignment/IKZF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-201/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_8.n_407-vs-IKZF2-201.alignment counts-znf_b1h_alignment/IKZF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-201/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_9.n_320-vs-IKZF2-201.alignment counts-znf_b1h_alignment/IKZF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-205/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_0.n_6023-vs-IKZF2-205.alignment counts-znf_b1h_alignment/IKZF2-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-205/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_10.n_83-vs-IKZF2-205.alignment counts-znf_b1h_alignment/IKZF2-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-205/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_11.n_79-vs-IKZF2-205.alignment counts-znf_b1h_alignment/IKZF2-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-205/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_12.n_75-vs-IKZF2-205.alignment counts-znf_b1h_alignment/IKZF2-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-205/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_13.n_64-vs-IKZF2-205.alignment counts-znf_b1h_alignment/IKZF2-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-205/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_14.n_62-vs-IKZF2-205.alignment counts-znf_b1h_alignment/IKZF2-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-205/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_15.n_34-vs-IKZF2-205.alignment counts-znf_b1h_alignment/IKZF2-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-205/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_16.n_34-vs-IKZF2-205.alignment counts-znf_b1h_alignment/IKZF2-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-205/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_17.n_28-vs-IKZF2-205.alignment counts-znf_b1h_alignment/IKZF2-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-205/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_18.n_27-vs-IKZF2-205.alignment counts-znf_b1h_alignment/IKZF2-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-205/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_1.n_5128-vs-IKZF2-205.alignment counts-znf_b1h_alignment/IKZF2-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-205/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_2.n_4914-vs-IKZF2-205.alignment counts-znf_b1h_alignment/IKZF2-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-205/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_3.n_4426-vs-IKZF2-205.alignment counts-znf_b1h_alignment/IKZF2-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-205/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_4.n_4343-vs-IKZF2-205.alignment counts-znf_b1h_alignment/IKZF2-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-205/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_5.n_2351-vs-IKZF2-205.alignment counts-znf_b1h_alignment/IKZF2-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-205/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_6.n_1244-vs-IKZF2-205.alignment counts-znf_b1h_alignment/IKZF2-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-205/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_7.n_480-vs-IKZF2-205.alignment counts-znf_b1h_alignment/IKZF2-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-205/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_8.n_415-vs-IKZF2-205.alignment counts-znf_b1h_alignment/IKZF2-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-205/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_9.n_345-vs-IKZF2-205.alignment counts-znf_b1h_alignment/IKZF2-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-205/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_0.n_7891-vs-IKZF2-205.alignment counts-znf_b1h_alignment/IKZF2-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-205/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_10.n_149-vs-IKZF2-205.alignment counts-znf_b1h_alignment/IKZF2-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-205/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_11.n_96-vs-IKZF2-205.alignment counts-znf_b1h_alignment/IKZF2-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-205/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_12.n_36-vs-IKZF2-205.alignment counts-znf_b1h_alignment/IKZF2-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-205/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_13.n_35-vs-IKZF2-205.alignment counts-znf_b1h_alignment/IKZF2-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-205/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_14.n_25-vs-IKZF2-205.alignment counts-znf_b1h_alignment/IKZF2-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-205/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_15.n_22-vs-IKZF2-205.alignment counts-znf_b1h_alignment/IKZF2-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-205/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_16.n_21-vs-IKZF2-205.alignment counts-znf_b1h_alignment/IKZF2-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-205/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_17.n_21-vs-IKZF2-205.alignment counts-znf_b1h_alignment/IKZF2-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-205/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_1.n_6361-vs-IKZF2-205.alignment counts-znf_b1h_alignment/IKZF2-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-205/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_2.n_5442-vs-IKZF2-205.alignment counts-znf_b1h_alignment/IKZF2-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-205/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_3.n_5132-vs-IKZF2-205.alignment counts-znf_b1h_alignment/IKZF2-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-205/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_4.n_4888-vs-IKZF2-205.alignment counts-znf_b1h_alignment/IKZF2-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-205/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_5.n_3460-vs-IKZF2-205.alignment counts-znf_b1h_alignment/IKZF2-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-205/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_6.n_1817-vs-IKZF2-205.alignment counts-znf_b1h_alignment/IKZF2-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-205/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_7.n_955-vs-IKZF2-205.alignment counts-znf_b1h_alignment/IKZF2-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-205/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_8.n_407-vs-IKZF2-205.alignment counts-znf_b1h_alignment/IKZF2-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-205/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_9.n_320-vs-IKZF2-205.alignment counts-znf_b1h_alignment/IKZF2-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-208/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_0.n_6023-vs-IKZF2-208.alignment counts-znf_b1h_alignment/IKZF2-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-208/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_10.n_83-vs-IKZF2-208.alignment counts-znf_b1h_alignment/IKZF2-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-208/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_11.n_79-vs-IKZF2-208.alignment counts-znf_b1h_alignment/IKZF2-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-208/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_12.n_75-vs-IKZF2-208.alignment counts-znf_b1h_alignment/IKZF2-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-208/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_13.n_64-vs-IKZF2-208.alignment counts-znf_b1h_alignment/IKZF2-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-208/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_14.n_62-vs-IKZF2-208.alignment counts-znf_b1h_alignment/IKZF2-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-208/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_15.n_34-vs-IKZF2-208.alignment counts-znf_b1h_alignment/IKZF2-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-208/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_16.n_34-vs-IKZF2-208.alignment counts-znf_b1h_alignment/IKZF2-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-208/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_17.n_28-vs-IKZF2-208.alignment counts-znf_b1h_alignment/IKZF2-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-208/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_18.n_27-vs-IKZF2-208.alignment counts-znf_b1h_alignment/IKZF2-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-208/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_1.n_5128-vs-IKZF2-208.alignment counts-znf_b1h_alignment/IKZF2-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-208/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_2.n_4914-vs-IKZF2-208.alignment counts-znf_b1h_alignment/IKZF2-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-208/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_3.n_4426-vs-IKZF2-208.alignment counts-znf_b1h_alignment/IKZF2-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-208/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_4.n_4343-vs-IKZF2-208.alignment counts-znf_b1h_alignment/IKZF2-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-208/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_5.n_2351-vs-IKZF2-208.alignment counts-znf_b1h_alignment/IKZF2-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-208/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_6.n_1244-vs-IKZF2-208.alignment counts-znf_b1h_alignment/IKZF2-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-208/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_7.n_480-vs-IKZF2-208.alignment counts-znf_b1h_alignment/IKZF2-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-208/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_8.n_415-vs-IKZF2-208.alignment counts-znf_b1h_alignment/IKZF2-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-208/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_9.n_345-vs-IKZF2-208.alignment counts-znf_b1h_alignment/IKZF2-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-208/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_0.n_7891-vs-IKZF2-208.alignment counts-znf_b1h_alignment/IKZF2-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-208/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_10.n_149-vs-IKZF2-208.alignment counts-znf_b1h_alignment/IKZF2-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-208/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_11.n_96-vs-IKZF2-208.alignment counts-znf_b1h_alignment/IKZF2-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-208/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_12.n_36-vs-IKZF2-208.alignment counts-znf_b1h_alignment/IKZF2-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-208/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_13.n_35-vs-IKZF2-208.alignment counts-znf_b1h_alignment/IKZF2-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-208/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_14.n_25-vs-IKZF2-208.alignment counts-znf_b1h_alignment/IKZF2-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-208/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_15.n_22-vs-IKZF2-208.alignment counts-znf_b1h_alignment/IKZF2-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-208/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_16.n_21-vs-IKZF2-208.alignment counts-znf_b1h_alignment/IKZF2-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-208/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_17.n_21-vs-IKZF2-208.alignment counts-znf_b1h_alignment/IKZF2-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-208/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_1.n_6361-vs-IKZF2-208.alignment counts-znf_b1h_alignment/IKZF2-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-208/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_2.n_5442-vs-IKZF2-208.alignment counts-znf_b1h_alignment/IKZF2-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-208/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_3.n_5132-vs-IKZF2-208.alignment counts-znf_b1h_alignment/IKZF2-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-208/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_4.n_4888-vs-IKZF2-208.alignment counts-znf_b1h_alignment/IKZF2-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-208/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_5.n_3460-vs-IKZF2-208.alignment counts-znf_b1h_alignment/IKZF2-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-208/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_6.n_1817-vs-IKZF2-208.alignment counts-znf_b1h_alignment/IKZF2-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-208/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_7.n_955-vs-IKZF2-208.alignment counts-znf_b1h_alignment/IKZF2-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-208/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_8.n_407-vs-IKZF2-208.alignment counts-znf_b1h_alignment/IKZF2-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-208/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_9.n_320-vs-IKZF2-208.alignment counts-znf_b1h_alignment/IKZF2-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-213/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_0.n_6023-vs-IKZF2-213.alignment counts-znf_b1h_alignment/IKZF2-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-213/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_10.n_83-vs-IKZF2-213.alignment counts-znf_b1h_alignment/IKZF2-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-213/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_11.n_79-vs-IKZF2-213.alignment counts-znf_b1h_alignment/IKZF2-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-213/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_12.n_75-vs-IKZF2-213.alignment counts-znf_b1h_alignment/IKZF2-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-213/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_13.n_64-vs-IKZF2-213.alignment counts-znf_b1h_alignment/IKZF2-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-213/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_14.n_62-vs-IKZF2-213.alignment counts-znf_b1h_alignment/IKZF2-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-213/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_15.n_34-vs-IKZF2-213.alignment counts-znf_b1h_alignment/IKZF2-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-213/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_16.n_34-vs-IKZF2-213.alignment counts-znf_b1h_alignment/IKZF2-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-213/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_17.n_28-vs-IKZF2-213.alignment counts-znf_b1h_alignment/IKZF2-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-213/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_18.n_27-vs-IKZF2-213.alignment counts-znf_b1h_alignment/IKZF2-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-213/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_1.n_5128-vs-IKZF2-213.alignment counts-znf_b1h_alignment/IKZF2-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-213/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_2.n_4914-vs-IKZF2-213.alignment counts-znf_b1h_alignment/IKZF2-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-213/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_3.n_4426-vs-IKZF2-213.alignment counts-znf_b1h_alignment/IKZF2-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-213/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_4.n_4343-vs-IKZF2-213.alignment counts-znf_b1h_alignment/IKZF2-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-213/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_5.n_2351-vs-IKZF2-213.alignment counts-znf_b1h_alignment/IKZF2-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-213/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_6.n_1244-vs-IKZF2-213.alignment counts-znf_b1h_alignment/IKZF2-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-213/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_7.n_480-vs-IKZF2-213.alignment counts-znf_b1h_alignment/IKZF2-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-213/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_8.n_415-vs-IKZF2-213.alignment counts-znf_b1h_alignment/IKZF2-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-213/pos_patterns.ENCSR680UQE_ChIP_IKZF2_GM12878_ENCSR289CZE_counts_pattern_9.n_345-vs-IKZF2-213.alignment counts-znf_b1h_alignment/IKZF2-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-213/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_0.n_7891-vs-IKZF2-213.alignment counts-znf_b1h_alignment/IKZF2-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-213/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_10.n_149-vs-IKZF2-213.alignment counts-znf_b1h_alignment/IKZF2-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-213/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_11.n_96-vs-IKZF2-213.alignment counts-znf_b1h_alignment/IKZF2-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-213/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_12.n_36-vs-IKZF2-213.alignment counts-znf_b1h_alignment/IKZF2-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-213/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_13.n_35-vs-IKZF2-213.alignment counts-znf_b1h_alignment/IKZF2-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-213/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_14.n_25-vs-IKZF2-213.alignment counts-znf_b1h_alignment/IKZF2-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-213/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_15.n_22-vs-IKZF2-213.alignment counts-znf_b1h_alignment/IKZF2-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-213/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_16.n_21-vs-IKZF2-213.alignment counts-znf_b1h_alignment/IKZF2-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-213/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_17.n_21-vs-IKZF2-213.alignment counts-znf_b1h_alignment/IKZF2-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-213/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_1.n_6361-vs-IKZF2-213.alignment counts-znf_b1h_alignment/IKZF2-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-213/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_2.n_5442-vs-IKZF2-213.alignment counts-znf_b1h_alignment/IKZF2-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-213/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_3.n_5132-vs-IKZF2-213.alignment counts-znf_b1h_alignment/IKZF2-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-213/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_4.n_4888-vs-IKZF2-213.alignment counts-znf_b1h_alignment/IKZF2-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-213/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_5.n_3460-vs-IKZF2-213.alignment counts-znf_b1h_alignment/IKZF2-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-213/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_6.n_1817-vs-IKZF2-213.alignment counts-znf_b1h_alignment/IKZF2-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-213/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_7.n_955-vs-IKZF2-213.alignment counts-znf_b1h_alignment/IKZF2-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-213/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_8.n_407-vs-IKZF2-213.alignment counts-znf_b1h_alignment/IKZF2-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF2-213/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_counts_pattern_9.n_320-vs-IKZF2-213.alignment counts-znf_b1h_alignment/IKZF2-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/Hughes_GR_models_IKZF3_counts-pos.pattern_0.n_923-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/Hughes_GR_models_IKZF3_counts-pos.pattern_10.n_219-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/Hughes_GR_models_IKZF3_counts-pos.pattern_11.n_173-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/Hughes_GR_models_IKZF3_counts-pos.pattern_12.n_148-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/Hughes_GR_models_IKZF3_counts-pos.pattern_13.n_139-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/Hughes_GR_models_IKZF3_counts-pos.pattern_14.n_118-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/Hughes_GR_models_IKZF3_counts-pos.pattern_15.n_103-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/Hughes_GR_models_IKZF3_counts-pos.pattern_16.n_93-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/Hughes_GR_models_IKZF3_counts-pos.pattern_17.n_86-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/Hughes_GR_models_IKZF3_counts-pos.pattern_18.n_84-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/Hughes_GR_models_IKZF3_counts-pos.pattern_19.n_52-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/Hughes_GR_models_IKZF3_counts-pos.pattern_1.n_561-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/Hughes_GR_models_IKZF3_counts-pos.pattern_20.n_24-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/Hughes_GR_models_IKZF3_counts-pos.pattern_21.n_22-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/Hughes_GR_models_IKZF3_counts-pos.pattern_2.n_443-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/Hughes_GR_models_IKZF3_counts-pos.pattern_3.n_366-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/Hughes_GR_models_IKZF3_counts-pos.pattern_4.n_364-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/Hughes_GR_models_IKZF3_counts-pos.pattern_5.n_238-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/Hughes_GR_models_IKZF3_counts-pos.pattern_6.n_235-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/Hughes_GR_models_IKZF3_counts-pos.pattern_7.n_234-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/Hughes_GR_models_IKZF3_counts-pos.pattern_8.n_233-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/Hughes_GR_models_IKZF3_counts-pos.pattern_9.n_224-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_0.n_3205-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_10.n_671-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_11.n_630-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_12.n_526-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_13.n_519-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_14.n_515-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_15.n_458-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_16.n_456-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_17.n_395-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_18.n_392-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_19.n_378-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_1.n_2119-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_20.n_343-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_21.n_340-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_22.n_334-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_23.n_288-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_24.n_252-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_25.n_242-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_26.n_237-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_27.n_234-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_28.n_229-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_29.n_174-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_2.n_1967-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_30.n_164-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_31.n_157-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_32.n_130-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_33.n_130-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_34.n_94-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_35.n_93-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_36.n_86-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_37.n_74-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_38.n_48-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_39.n_29-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_3.n_1420-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_4.n_1301-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_5.n_1231-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_6.n_1194-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_7.n_968-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_8.n_895-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-201/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_9.n_742-vs-IKZF3-201.alignment counts-znf_b1h_alignment/IKZF3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/Hughes_GR_models_IKZF3_counts-pos.pattern_0.n_923-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/Hughes_GR_models_IKZF3_counts-pos.pattern_10.n_219-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/Hughes_GR_models_IKZF3_counts-pos.pattern_11.n_173-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/Hughes_GR_models_IKZF3_counts-pos.pattern_12.n_148-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/Hughes_GR_models_IKZF3_counts-pos.pattern_13.n_139-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/Hughes_GR_models_IKZF3_counts-pos.pattern_14.n_118-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/Hughes_GR_models_IKZF3_counts-pos.pattern_15.n_103-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/Hughes_GR_models_IKZF3_counts-pos.pattern_16.n_93-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/Hughes_GR_models_IKZF3_counts-pos.pattern_17.n_86-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/Hughes_GR_models_IKZF3_counts-pos.pattern_18.n_84-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/Hughes_GR_models_IKZF3_counts-pos.pattern_19.n_52-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/Hughes_GR_models_IKZF3_counts-pos.pattern_1.n_561-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/Hughes_GR_models_IKZF3_counts-pos.pattern_20.n_24-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/Hughes_GR_models_IKZF3_counts-pos.pattern_21.n_22-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/Hughes_GR_models_IKZF3_counts-pos.pattern_2.n_443-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/Hughes_GR_models_IKZF3_counts-pos.pattern_3.n_366-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/Hughes_GR_models_IKZF3_counts-pos.pattern_4.n_364-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/Hughes_GR_models_IKZF3_counts-pos.pattern_5.n_238-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/Hughes_GR_models_IKZF3_counts-pos.pattern_6.n_235-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/Hughes_GR_models_IKZF3_counts-pos.pattern_7.n_234-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/Hughes_GR_models_IKZF3_counts-pos.pattern_8.n_233-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/Hughes_GR_models_IKZF3_counts-pos.pattern_9.n_224-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_0.n_3205-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_10.n_671-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_11.n_630-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_12.n_526-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_13.n_519-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_14.n_515-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_15.n_458-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_16.n_456-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_17.n_395-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_18.n_392-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_19.n_378-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_1.n_2119-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_20.n_343-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_21.n_340-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_22.n_334-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_23.n_288-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_24.n_252-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_25.n_242-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_26.n_237-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_27.n_234-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_28.n_229-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_29.n_174-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_2.n_1967-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_30.n_164-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_31.n_157-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_32.n_130-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_33.n_130-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_34.n_94-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_35.n_93-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_36.n_86-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_37.n_74-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_38.n_48-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_39.n_29-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_3.n_1420-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_4.n_1301-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_5.n_1231-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_6.n_1194-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_7.n_968-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_8.n_895-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-203/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_9.n_742-vs-IKZF3-203.alignment counts-znf_b1h_alignment/IKZF3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/Hughes_GR_models_IKZF3_counts-pos.pattern_0.n_923-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/Hughes_GR_models_IKZF3_counts-pos.pattern_10.n_219-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/Hughes_GR_models_IKZF3_counts-pos.pattern_11.n_173-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/Hughes_GR_models_IKZF3_counts-pos.pattern_12.n_148-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/Hughes_GR_models_IKZF3_counts-pos.pattern_13.n_139-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/Hughes_GR_models_IKZF3_counts-pos.pattern_14.n_118-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/Hughes_GR_models_IKZF3_counts-pos.pattern_15.n_103-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/Hughes_GR_models_IKZF3_counts-pos.pattern_16.n_93-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/Hughes_GR_models_IKZF3_counts-pos.pattern_17.n_86-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/Hughes_GR_models_IKZF3_counts-pos.pattern_18.n_84-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/Hughes_GR_models_IKZF3_counts-pos.pattern_19.n_52-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/Hughes_GR_models_IKZF3_counts-pos.pattern_1.n_561-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/Hughes_GR_models_IKZF3_counts-pos.pattern_20.n_24-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/Hughes_GR_models_IKZF3_counts-pos.pattern_21.n_22-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/Hughes_GR_models_IKZF3_counts-pos.pattern_2.n_443-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/Hughes_GR_models_IKZF3_counts-pos.pattern_3.n_366-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/Hughes_GR_models_IKZF3_counts-pos.pattern_4.n_364-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/Hughes_GR_models_IKZF3_counts-pos.pattern_5.n_238-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/Hughes_GR_models_IKZF3_counts-pos.pattern_6.n_235-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/Hughes_GR_models_IKZF3_counts-pos.pattern_7.n_234-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/Hughes_GR_models_IKZF3_counts-pos.pattern_8.n_233-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/Hughes_GR_models_IKZF3_counts-pos.pattern_9.n_224-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_0.n_3205-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_10.n_671-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_11.n_630-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_12.n_526-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_13.n_519-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_14.n_515-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_15.n_458-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_16.n_456-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_17.n_395-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_18.n_392-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_19.n_378-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_1.n_2119-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_20.n_343-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_21.n_340-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_22.n_334-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_23.n_288-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_24.n_252-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_25.n_242-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_26.n_237-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_27.n_234-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_28.n_229-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_29.n_174-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_2.n_1967-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_30.n_164-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_31.n_157-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_32.n_130-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_33.n_130-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_34.n_94-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_35.n_93-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_36.n_86-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_37.n_74-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_38.n_48-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_39.n_29-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_3.n_1420-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_4.n_1301-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_5.n_1231-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_6.n_1194-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_7.n_968-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_8.n_895-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-204/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_9.n_742-vs-IKZF3-204.alignment counts-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/Hughes_GR_models_IKZF3_counts-pos.pattern_0.n_923-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/Hughes_GR_models_IKZF3_counts-pos.pattern_10.n_219-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/Hughes_GR_models_IKZF3_counts-pos.pattern_11.n_173-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/Hughes_GR_models_IKZF3_counts-pos.pattern_12.n_148-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/Hughes_GR_models_IKZF3_counts-pos.pattern_13.n_139-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/Hughes_GR_models_IKZF3_counts-pos.pattern_14.n_118-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/Hughes_GR_models_IKZF3_counts-pos.pattern_15.n_103-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/Hughes_GR_models_IKZF3_counts-pos.pattern_16.n_93-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/Hughes_GR_models_IKZF3_counts-pos.pattern_17.n_86-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/Hughes_GR_models_IKZF3_counts-pos.pattern_18.n_84-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/Hughes_GR_models_IKZF3_counts-pos.pattern_19.n_52-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/Hughes_GR_models_IKZF3_counts-pos.pattern_1.n_561-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/Hughes_GR_models_IKZF3_counts-pos.pattern_20.n_24-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/Hughes_GR_models_IKZF3_counts-pos.pattern_21.n_22-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/Hughes_GR_models_IKZF3_counts-pos.pattern_2.n_443-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/Hughes_GR_models_IKZF3_counts-pos.pattern_3.n_366-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/Hughes_GR_models_IKZF3_counts-pos.pattern_4.n_364-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/Hughes_GR_models_IKZF3_counts-pos.pattern_5.n_238-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/Hughes_GR_models_IKZF3_counts-pos.pattern_6.n_235-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/Hughes_GR_models_IKZF3_counts-pos.pattern_7.n_234-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/Hughes_GR_models_IKZF3_counts-pos.pattern_8.n_233-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/Hughes_GR_models_IKZF3_counts-pos.pattern_9.n_224-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_0.n_3205-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_10.n_671-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_11.n_630-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_12.n_526-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_13.n_519-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_14.n_515-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_15.n_458-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_16.n_456-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_17.n_395-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_18.n_392-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_19.n_378-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_1.n_2119-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_20.n_343-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_21.n_340-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_22.n_334-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_23.n_288-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_24.n_252-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_25.n_242-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_26.n_237-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_27.n_234-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_28.n_229-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_29.n_174-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_2.n_1967-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_30.n_164-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_31.n_157-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_32.n_130-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_33.n_130-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_34.n_94-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_35.n_93-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_36.n_86-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_37.n_74-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_38.n_48-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_39.n_29-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_3.n_1420-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_4.n_1301-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_5.n_1231-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_6.n_1194-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_7.n_968-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_8.n_895-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF3-207/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_counts_pattern_9.n_742-vs-IKZF3-207.alignment counts-znf_b1h_alignment/IKZF3-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF4-201/neg_patterns.ENCSR799DUB_ChIP_IKZF4_HepG2_ENCSR394KOQ_counts_pattern_0.n_62-vs-IKZF4-201.alignment counts-znf_b1h_alignment/IKZF4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF4-201/neg_patterns.ENCSR799DUB_ChIP_IKZF4_HepG2_ENCSR394KOQ_counts_pattern_1.n_33-vs-IKZF4-201.alignment counts-znf_b1h_alignment/IKZF4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF4-201/neg_patterns.ENCSR799DUB_ChIP_IKZF4_HepG2_ENCSR394KOQ_counts_pattern_2.n_29-vs-IKZF4-201.alignment counts-znf_b1h_alignment/IKZF4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF4-201/neg_patterns.ENCSR799DUB_ChIP_IKZF4_HepG2_ENCSR394KOQ_counts_pattern_3.n_28-vs-IKZF4-201.alignment counts-znf_b1h_alignment/IKZF4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF4-201/neg_patterns.ENCSR799DUB_ChIP_IKZF4_HepG2_ENCSR394KOQ_counts_pattern_4.n_28-vs-IKZF4-201.alignment counts-znf_b1h_alignment/IKZF4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF4-201/neg_patterns.ENCSR799DUB_ChIP_IKZF4_HepG2_ENCSR394KOQ_counts_pattern_5.n_24-vs-IKZF4-201.alignment counts-znf_b1h_alignment/IKZF4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF4-201/pos_patterns.ENCSR799DUB_ChIP_IKZF4_HepG2_ENCSR394KOQ_counts_pattern_0.n_2104-vs-IKZF4-201.alignment counts-znf_b1h_alignment/IKZF4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF4-201/pos_patterns.ENCSR799DUB_ChIP_IKZF4_HepG2_ENCSR394KOQ_counts_pattern_10.n_199-vs-IKZF4-201.alignment counts-znf_b1h_alignment/IKZF4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF4-201/pos_patterns.ENCSR799DUB_ChIP_IKZF4_HepG2_ENCSR394KOQ_counts_pattern_11.n_198-vs-IKZF4-201.alignment counts-znf_b1h_alignment/IKZF4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF4-201/pos_patterns.ENCSR799DUB_ChIP_IKZF4_HepG2_ENCSR394KOQ_counts_pattern_12.n_134-vs-IKZF4-201.alignment counts-znf_b1h_alignment/IKZF4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF4-201/pos_patterns.ENCSR799DUB_ChIP_IKZF4_HepG2_ENCSR394KOQ_counts_pattern_13.n_127-vs-IKZF4-201.alignment counts-znf_b1h_alignment/IKZF4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF4-201/pos_patterns.ENCSR799DUB_ChIP_IKZF4_HepG2_ENCSR394KOQ_counts_pattern_14.n_126-vs-IKZF4-201.alignment counts-znf_b1h_alignment/IKZF4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF4-201/pos_patterns.ENCSR799DUB_ChIP_IKZF4_HepG2_ENCSR394KOQ_counts_pattern_15.n_117-vs-IKZF4-201.alignment counts-znf_b1h_alignment/IKZF4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF4-201/pos_patterns.ENCSR799DUB_ChIP_IKZF4_HepG2_ENCSR394KOQ_counts_pattern_16.n_103-vs-IKZF4-201.alignment counts-znf_b1h_alignment/IKZF4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF4-201/pos_patterns.ENCSR799DUB_ChIP_IKZF4_HepG2_ENCSR394KOQ_counts_pattern_17.n_84-vs-IKZF4-201.alignment counts-znf_b1h_alignment/IKZF4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF4-201/pos_patterns.ENCSR799DUB_ChIP_IKZF4_HepG2_ENCSR394KOQ_counts_pattern_18.n_73-vs-IKZF4-201.alignment counts-znf_b1h_alignment/IKZF4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF4-201/pos_patterns.ENCSR799DUB_ChIP_IKZF4_HepG2_ENCSR394KOQ_counts_pattern_19.n_70-vs-IKZF4-201.alignment counts-znf_b1h_alignment/IKZF4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF4-201/pos_patterns.ENCSR799DUB_ChIP_IKZF4_HepG2_ENCSR394KOQ_counts_pattern_1.n_2024-vs-IKZF4-201.alignment counts-znf_b1h_alignment/IKZF4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF4-201/pos_patterns.ENCSR799DUB_ChIP_IKZF4_HepG2_ENCSR394KOQ_counts_pattern_20.n_65-vs-IKZF4-201.alignment counts-znf_b1h_alignment/IKZF4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF4-201/pos_patterns.ENCSR799DUB_ChIP_IKZF4_HepG2_ENCSR394KOQ_counts_pattern_21.n_62-vs-IKZF4-201.alignment counts-znf_b1h_alignment/IKZF4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF4-201/pos_patterns.ENCSR799DUB_ChIP_IKZF4_HepG2_ENCSR394KOQ_counts_pattern_22.n_59-vs-IKZF4-201.alignment counts-znf_b1h_alignment/IKZF4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF4-201/pos_patterns.ENCSR799DUB_ChIP_IKZF4_HepG2_ENCSR394KOQ_counts_pattern_2.n_957-vs-IKZF4-201.alignment counts-znf_b1h_alignment/IKZF4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF4-201/pos_patterns.ENCSR799DUB_ChIP_IKZF4_HepG2_ENCSR394KOQ_counts_pattern_3.n_839-vs-IKZF4-201.alignment counts-znf_b1h_alignment/IKZF4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF4-201/pos_patterns.ENCSR799DUB_ChIP_IKZF4_HepG2_ENCSR394KOQ_counts_pattern_4.n_374-vs-IKZF4-201.alignment counts-znf_b1h_alignment/IKZF4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF4-201/pos_patterns.ENCSR799DUB_ChIP_IKZF4_HepG2_ENCSR394KOQ_counts_pattern_5.n_283-vs-IKZF4-201.alignment counts-znf_b1h_alignment/IKZF4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF4-201/pos_patterns.ENCSR799DUB_ChIP_IKZF4_HepG2_ENCSR394KOQ_counts_pattern_6.n_236-vs-IKZF4-201.alignment counts-znf_b1h_alignment/IKZF4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF4-201/pos_patterns.ENCSR799DUB_ChIP_IKZF4_HepG2_ENCSR394KOQ_counts_pattern_7.n_225-vs-IKZF4-201.alignment counts-znf_b1h_alignment/IKZF4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF4-201/pos_patterns.ENCSR799DUB_ChIP_IKZF4_HepG2_ENCSR394KOQ_counts_pattern_8.n_220-vs-IKZF4-201.alignment counts-znf_b1h_alignment/IKZF4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF4-201/pos_patterns.ENCSR799DUB_ChIP_IKZF4_HepG2_ENCSR394KOQ_counts_pattern_9.n_202-vs-IKZF4-201.alignment counts-znf_b1h_alignment/IKZF4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF5-201/pos_patterns.ENCSR210HBN_ChIP_IKZF5_HepG2_ENCSR323YNT_counts_pattern_0.n_5598-vs-IKZF5-201.alignment counts-znf_b1h_alignment/IKZF5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF5-201/pos_patterns.ENCSR210HBN_ChIP_IKZF5_HepG2_ENCSR323YNT_counts_pattern_10.n_567-vs-IKZF5-201.alignment counts-znf_b1h_alignment/IKZF5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF5-201/pos_patterns.ENCSR210HBN_ChIP_IKZF5_HepG2_ENCSR323YNT_counts_pattern_11.n_316-vs-IKZF5-201.alignment counts-znf_b1h_alignment/IKZF5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF5-201/pos_patterns.ENCSR210HBN_ChIP_IKZF5_HepG2_ENCSR323YNT_counts_pattern_12.n_72-vs-IKZF5-201.alignment counts-znf_b1h_alignment/IKZF5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF5-201/pos_patterns.ENCSR210HBN_ChIP_IKZF5_HepG2_ENCSR323YNT_counts_pattern_13.n_25-vs-IKZF5-201.alignment counts-znf_b1h_alignment/IKZF5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF5-201/pos_patterns.ENCSR210HBN_ChIP_IKZF5_HepG2_ENCSR323YNT_counts_pattern_14.n_21-vs-IKZF5-201.alignment counts-znf_b1h_alignment/IKZF5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF5-201/pos_patterns.ENCSR210HBN_ChIP_IKZF5_HepG2_ENCSR323YNT_counts_pattern_1.n_3108-vs-IKZF5-201.alignment counts-znf_b1h_alignment/IKZF5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF5-201/pos_patterns.ENCSR210HBN_ChIP_IKZF5_HepG2_ENCSR323YNT_counts_pattern_2.n_2775-vs-IKZF5-201.alignment counts-znf_b1h_alignment/IKZF5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF5-201/pos_patterns.ENCSR210HBN_ChIP_IKZF5_HepG2_ENCSR323YNT_counts_pattern_3.n_2408-vs-IKZF5-201.alignment counts-znf_b1h_alignment/IKZF5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF5-201/pos_patterns.ENCSR210HBN_ChIP_IKZF5_HepG2_ENCSR323YNT_counts_pattern_4.n_1876-vs-IKZF5-201.alignment counts-znf_b1h_alignment/IKZF5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF5-201/pos_patterns.ENCSR210HBN_ChIP_IKZF5_HepG2_ENCSR323YNT_counts_pattern_5.n_1064-vs-IKZF5-201.alignment counts-znf_b1h_alignment/IKZF5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF5-201/pos_patterns.ENCSR210HBN_ChIP_IKZF5_HepG2_ENCSR323YNT_counts_pattern_6.n_1047-vs-IKZF5-201.alignment counts-znf_b1h_alignment/IKZF5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF5-201/pos_patterns.ENCSR210HBN_ChIP_IKZF5_HepG2_ENCSR323YNT_counts_pattern_7.n_995-vs-IKZF5-201.alignment counts-znf_b1h_alignment/IKZF5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF5-201/pos_patterns.ENCSR210HBN_ChIP_IKZF5_HepG2_ENCSR323YNT_counts_pattern_8.n_924-vs-IKZF5-201.alignment counts-znf_b1h_alignment/IKZF5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/IKZF5-201/pos_patterns.ENCSR210HBN_ChIP_IKZF5_HepG2_ENCSR323YNT_counts_pattern_9.n_642-vs-IKZF5-201.alignment counts-znf_b1h_alignment/IKZF5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/INSM2-201/pos_patterns.ENCSR382GSF_ChIP_INSM2_HEK293_ENCSR453YRW_counts_pattern_0.n_3433-vs-INSM2-201.alignment counts-znf_b1h_alignment/INSM2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/INSM2-201/pos_patterns.ENCSR382GSF_ChIP_INSM2_HEK293_ENCSR453YRW_counts_pattern_1.n_2411-vs-INSM2-201.alignment counts-znf_b1h_alignment/INSM2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/INSM2-201/pos_patterns.ENCSR382GSF_ChIP_INSM2_HEK293_ENCSR453YRW_counts_pattern_2.n_984-vs-INSM2-201.alignment counts-znf_b1h_alignment/INSM2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/INSM2-201/pos_patterns.ENCSR382GSF_ChIP_INSM2_HEK293_ENCSR453YRW_counts_pattern_3.n_645-vs-INSM2-201.alignment counts-znf_b1h_alignment/INSM2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/INSM2-201/pos_patterns.ENCSR382GSF_ChIP_INSM2_HEK293_ENCSR453YRW_counts_pattern_4.n_186-vs-INSM2-201.alignment counts-znf_b1h_alignment/INSM2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/INSM2-201/pos_patterns.ENCSR382GSF_ChIP_INSM2_HEK293_ENCSR453YRW_counts_pattern_5.n_137-vs-INSM2-201.alignment counts-znf_b1h_alignment/INSM2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/INSM2-201/pos_patterns.ENCSR382GSF_ChIP_INSM2_HEK293_ENCSR453YRW_counts_pattern_6.n_82-vs-INSM2-201.alignment counts-znf_b1h_alignment/INSM2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/INSM2-201/pos_patterns.ENCSR382GSF_ChIP_INSM2_HEK293_ENCSR453YRW_counts_pattern_7.n_29-vs-INSM2-201.alignment counts-znf_b1h_alignment/INSM2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF10-201/Hughes_NB_models_KLF10_counts-pos.pattern_0.n_161-vs-KLF10-201.alignment counts-znf_b1h_alignment/KLF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF10-201/Hughes_NB_models_KLF10_counts-pos.pattern_1.n_159-vs-KLF10-201.alignment counts-znf_b1h_alignment/KLF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF10-201/Hughes_NB_models_KLF10_counts-pos.pattern_2.n_20-vs-KLF10-201.alignment counts-znf_b1h_alignment/KLF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF10-201/neg_patterns.ENCSR121SPB_ChIP_KLF10_K562_ENCSR763GNC_counts_pattern_0.n_364-vs-KLF10-201.alignment counts-znf_b1h_alignment/KLF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF10-201/neg_patterns.ENCSR121SPB_ChIP_KLF10_K562_ENCSR763GNC_counts_pattern_1.n_292-vs-KLF10-201.alignment counts-znf_b1h_alignment/KLF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF10-201/neg_patterns.ENCSR121SPB_ChIP_KLF10_K562_ENCSR763GNC_counts_pattern_2.n_243-vs-KLF10-201.alignment counts-znf_b1h_alignment/KLF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF10-201/neg_patterns.ENCSR121SPB_ChIP_KLF10_K562_ENCSR763GNC_counts_pattern_3.n_57-vs-KLF10-201.alignment counts-znf_b1h_alignment/KLF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF10-201/neg_patterns.ENCSR121SPB_ChIP_KLF10_K562_ENCSR763GNC_counts_pattern_4.n_49-vs-KLF10-201.alignment counts-znf_b1h_alignment/KLF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF10-201/neg_patterns.ENCSR121SPB_ChIP_KLF10_K562_ENCSR763GNC_counts_pattern_5.n_33-vs-KLF10-201.alignment counts-znf_b1h_alignment/KLF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF10-201/pos_patterns.ENCSR006GAQ_ChIP_KLF10_HEK293_ENCSR438XYE_counts_pattern_0.n_5515-vs-KLF10-201.alignment counts-znf_b1h_alignment/KLF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF10-201/pos_patterns.ENCSR006GAQ_ChIP_KLF10_HEK293_ENCSR438XYE_counts_pattern_1.n_1679-vs-KLF10-201.alignment counts-znf_b1h_alignment/KLF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF10-201/pos_patterns.ENCSR006GAQ_ChIP_KLF10_HEK293_ENCSR438XYE_counts_pattern_2.n_1248-vs-KLF10-201.alignment counts-znf_b1h_alignment/KLF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF10-201/pos_patterns.ENCSR006GAQ_ChIP_KLF10_HEK293_ENCSR438XYE_counts_pattern_3.n_989-vs-KLF10-201.alignment counts-znf_b1h_alignment/KLF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF10-201/pos_patterns.ENCSR006GAQ_ChIP_KLF10_HEK293_ENCSR438XYE_counts_pattern_4.n_459-vs-KLF10-201.alignment counts-znf_b1h_alignment/KLF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF10-201/pos_patterns.ENCSR006GAQ_ChIP_KLF10_HEK293_ENCSR438XYE_counts_pattern_5.n_221-vs-KLF10-201.alignment counts-znf_b1h_alignment/KLF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF10-201/pos_patterns.ENCSR006GAQ_ChIP_KLF10_HEK293_ENCSR438XYE_counts_pattern_6.n_150-vs-KLF10-201.alignment counts-znf_b1h_alignment/KLF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF10-201/pos_patterns.ENCSR006GAQ_ChIP_KLF10_HEK293_ENCSR438XYE_counts_pattern_7.n_61-vs-KLF10-201.alignment counts-znf_b1h_alignment/KLF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF10-201/pos_patterns.ENCSR006GAQ_ChIP_KLF10_HEK293_ENCSR438XYE_counts_pattern_8.n_21-vs-KLF10-201.alignment counts-znf_b1h_alignment/KLF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF10-201/pos_patterns.ENCSR121SPB_ChIP_KLF10_K562_ENCSR763GNC_counts_pattern_0.n_48-vs-KLF10-201.alignment counts-znf_b1h_alignment/KLF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF10-201/pos_patterns.ENCSR121SPB_ChIP_KLF10_K562_ENCSR763GNC_counts_pattern_10.n_21-vs-KLF10-201.alignment counts-znf_b1h_alignment/KLF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF10-201/pos_patterns.ENCSR121SPB_ChIP_KLF10_K562_ENCSR763GNC_counts_pattern_11.n_20-vs-KLF10-201.alignment counts-znf_b1h_alignment/KLF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF10-201/pos_patterns.ENCSR121SPB_ChIP_KLF10_K562_ENCSR763GNC_counts_pattern_1.n_40-vs-KLF10-201.alignment counts-znf_b1h_alignment/KLF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF10-201/pos_patterns.ENCSR121SPB_ChIP_KLF10_K562_ENCSR763GNC_counts_pattern_2.n_38-vs-KLF10-201.alignment counts-znf_b1h_alignment/KLF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF10-201/pos_patterns.ENCSR121SPB_ChIP_KLF10_K562_ENCSR763GNC_counts_pattern_3.n_37-vs-KLF10-201.alignment counts-znf_b1h_alignment/KLF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF10-201/pos_patterns.ENCSR121SPB_ChIP_KLF10_K562_ENCSR763GNC_counts_pattern_4.n_33-vs-KLF10-201.alignment counts-znf_b1h_alignment/KLF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF10-201/pos_patterns.ENCSR121SPB_ChIP_KLF10_K562_ENCSR763GNC_counts_pattern_5.n_28-vs-KLF10-201.alignment counts-znf_b1h_alignment/KLF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF10-201/pos_patterns.ENCSR121SPB_ChIP_KLF10_K562_ENCSR763GNC_counts_pattern_6.n_24-vs-KLF10-201.alignment counts-znf_b1h_alignment/KLF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF10-201/pos_patterns.ENCSR121SPB_ChIP_KLF10_K562_ENCSR763GNC_counts_pattern_7.n_23-vs-KLF10-201.alignment counts-znf_b1h_alignment/KLF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF10-201/pos_patterns.ENCSR121SPB_ChIP_KLF10_K562_ENCSR763GNC_counts_pattern_8.n_22-vs-KLF10-201.alignment counts-znf_b1h_alignment/KLF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF10-201/pos_patterns.ENCSR121SPB_ChIP_KLF10_K562_ENCSR763GNC_counts_pattern_9.n_22-vs-KLF10-201.alignment counts-znf_b1h_alignment/KLF10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF1-201/Hughes_GR_models_KLF1_counts-pos.pattern_0.n_9715-vs-KLF1-201.alignment counts-znf_b1h_alignment/KLF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF1-201/Hughes_GR_models_KLF1_counts-pos.pattern_10.n_104-vs-KLF1-201.alignment counts-znf_b1h_alignment/KLF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF1-201/Hughes_GR_models_KLF1_counts-pos.pattern_11.n_92-vs-KLF1-201.alignment counts-znf_b1h_alignment/KLF1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF12-201/Hughes_GR_models_KLF12_counts-pos.pattern_8.n_53-vs-KLF12-201.alignment counts-znf_b1h_alignment/KLF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF12-201/Hughes_GR_models_KLF12_counts-pos.pattern_9.n_50-vs-KLF12-201.alignment counts-znf_b1h_alignment/KLF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF12-201/pos_patterns.ENCSR552YWL_ChIP_KLF12_HepG2_ENCSR610GYE_counts_pattern_0.n_4503-vs-KLF12-201.alignment counts-znf_b1h_alignment/KLF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF12-201/pos_patterns.ENCSR552YWL_ChIP_KLF12_HepG2_ENCSR610GYE_counts_pattern_10.n_65-vs-KLF12-201.alignment counts-znf_b1h_alignment/KLF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF12-201/pos_patterns.ENCSR552YWL_ChIP_KLF12_HepG2_ENCSR610GYE_counts_pattern_11.n_58-vs-KLF12-201.alignment counts-znf_b1h_alignment/KLF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF12-201/pos_patterns.ENCSR552YWL_ChIP_KLF12_HepG2_ENCSR610GYE_counts_pattern_1.n_753-vs-KLF12-201.alignment counts-znf_b1h_alignment/KLF12-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF13-207/neg_patterns.ENCSR756SZU_ChIP_KLF13_HepG2_ENCSR018KJW_counts_pattern_4.n_25-vs-KLF13-207.alignment counts-znf_b1h_alignment/KLF13-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF13-207/pos_patterns.ENCSR608HVP_ChIP_KLF13_K562_ENCSR243TNZ_counts_pattern_0.n_5779-vs-KLF13-207.alignment counts-znf_b1h_alignment/KLF13-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF13-207/pos_patterns.ENCSR608HVP_ChIP_KLF13_K562_ENCSR243TNZ_counts_pattern_1.n_1040-vs-KLF13-207.alignment counts-znf_b1h_alignment/KLF13-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF13-207/pos_patterns.ENCSR608HVP_ChIP_KLF13_K562_ENCSR243TNZ_counts_pattern_2.n_531-vs-KLF13-207.alignment counts-znf_b1h_alignment/KLF13-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF13-207/pos_patterns.ENCSR608HVP_ChIP_KLF13_K562_ENCSR243TNZ_counts_pattern_3.n_55-vs-KLF13-207.alignment counts-znf_b1h_alignment/KLF13-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF13-207/pos_patterns.ENCSR756SZU_ChIP_KLF13_HepG2_ENCSR018KJW_counts_pattern_0.n_1386-vs-KLF13-207.alignment counts-znf_b1h_alignment/KLF13-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF13-207/pos_patterns.ENCSR756SZU_ChIP_KLF13_HepG2_ENCSR018KJW_counts_pattern_1.n_1316-vs-KLF13-207.alignment counts-znf_b1h_alignment/KLF13-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF13-207/pos_patterns.ENCSR756SZU_ChIP_KLF13_HepG2_ENCSR018KJW_counts_pattern_2.n_1178-vs-KLF13-207.alignment counts-znf_b1h_alignment/KLF13-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF13-207/pos_patterns.ENCSR756SZU_ChIP_KLF13_HepG2_ENCSR018KJW_counts_pattern_3.n_906-vs-KLF13-207.alignment counts-znf_b1h_alignment/KLF13-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF13-207/pos_patterns.ENCSR756SZU_ChIP_KLF13_HepG2_ENCSR018KJW_counts_pattern_4.n_44-vs-KLF13-207.alignment counts-znf_b1h_alignment/KLF13-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF14-201/Hughes_NB_models_KLF14_counts-pos.pattern_0.n_4871-vs-KLF14-201.alignment counts-znf_b1h_alignment/KLF14-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF14-201/Hughes_NB_models_KLF14_counts-pos.pattern_1.n_130-vs-KLF14-201.alignment counts-znf_b1h_alignment/KLF14-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF14-201/Hughes_NB_models_KLF14_counts-pos.pattern_2.n_82-vs-KLF14-201.alignment counts-znf_b1h_alignment/KLF14-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF14-201/Hughes_NB_models_KLF14_counts-pos.pattern_3.n_44-vs-KLF14-201.alignment counts-znf_b1h_alignment/KLF14-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF14-201/Hughes_NB_models_KLF14_counts-pos.pattern_4.n_30-vs-KLF14-201.alignment counts-znf_b1h_alignment/KLF14-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF15-201/Hughes_GR_models_KLF15_counts-pos.pattern_11.n_99-vs-KLF15-201.alignment counts-znf_b1h_alignment/KLF15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF15-201/Hughes_GR_models_KLF15_counts-pos.pattern_12.n_95-vs-KLF15-201.alignment counts-znf_b1h_alignment/KLF15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF15-201/Hughes_GR_models_KLF15_counts-pos.pattern_13.n_80-vs-KLF15-201.alignment counts-znf_b1h_alignment/KLF15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF15-201/Hughes_GR_models_KLF15_counts-pos.pattern_14.n_78-vs-KLF15-201.alignment counts-znf_b1h_alignment/KLF15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF15-201/Hughes_GR_models_KLF15_counts-pos.pattern_15.n_75-vs-KLF15-201.alignment counts-znf_b1h_alignment/KLF15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF15-201/Hughes_GR_models_KLF15_counts-pos.pattern_16.n_72-vs-KLF15-201.alignment counts-znf_b1h_alignment/KLF15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF15-201/Hughes_GR_models_KLF15_counts-pos.pattern_17.n_68-vs-KLF15-201.alignment counts-znf_b1h_alignment/KLF15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF15-201/Hughes_GR_models_KLF15_counts-pos.pattern_18.n_68-vs-KLF15-201.alignment counts-znf_b1h_alignment/KLF15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF15-201/Hughes_GR_models_KLF15_counts-pos.pattern_19.n_61-vs-KLF15-201.alignment counts-znf_b1h_alignment/KLF15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF15-201/Hughes_GR_models_KLF15_counts-pos.pattern_1.n_2634-vs-KLF15-201.alignment counts-znf_b1h_alignment/KLF15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF15-201/Hughes_GR_models_KLF15_counts-pos.pattern_20.n_44-vs-KLF15-201.alignment counts-znf_b1h_alignment/KLF15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF15-201/Hughes_GR_models_KLF15_counts-pos.pattern_21.n_33-vs-KLF15-201.alignment counts-znf_b1h_alignment/KLF15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF15-201/Hughes_GR_models_KLF15_counts-pos.pattern_2.n_2159-vs-KLF15-201.alignment counts-znf_b1h_alignment/KLF15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF15-201/Hughes_GR_models_KLF15_counts-pos.pattern_3.n_1259-vs-KLF15-201.alignment counts-znf_b1h_alignment/KLF15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF15-201/Hughes_GR_models_KLF15_counts-pos.pattern_4.n_737-vs-KLF15-201.alignment counts-znf_b1h_alignment/KLF15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF15-201/Hughes_GR_models_KLF15_counts-pos.pattern_5.n_334-vs-KLF15-201.alignment counts-znf_b1h_alignment/KLF15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF15-201/Hughes_GR_models_KLF15_counts-pos.pattern_6.n_327-vs-KLF15-201.alignment counts-znf_b1h_alignment/KLF15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF15-201/Hughes_GR_models_KLF15_counts-pos.pattern_7.n_231-vs-KLF15-201.alignment counts-znf_b1h_alignment/KLF15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF15-201/Hughes_GR_models_KLF15_counts-pos.pattern_8.n_213-vs-KLF15-201.alignment counts-znf_b1h_alignment/KLF15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF15-201/Hughes_GR_models_KLF15_counts-pos.pattern_9.n_188-vs-KLF15-201.alignment counts-znf_b1h_alignment/KLF15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF15-201/pos_patterns.ENCSR860ONE_ChIP_KLF15_HepG2_ENCSR508FPI_counts_pattern_0.n_1390-vs-KLF15-201.alignment counts-znf_b1h_alignment/KLF15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF15-201/pos_patterns.ENCSR860ONE_ChIP_KLF15_HepG2_ENCSR508FPI_counts_pattern_1.n_1353-vs-KLF15-201.alignment counts-znf_b1h_alignment/KLF15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF15-201/pos_patterns.ENCSR860ONE_ChIP_KLF15_HepG2_ENCSR508FPI_counts_pattern_2.n_1211-vs-KLF15-201.alignment counts-znf_b1h_alignment/KLF15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF15-201/pos_patterns.ENCSR860ONE_ChIP_KLF15_HepG2_ENCSR508FPI_counts_pattern_3.n_1053-vs-KLF15-201.alignment counts-znf_b1h_alignment/KLF15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF15-201/pos_patterns.ENCSR860ONE_ChIP_KLF15_HepG2_ENCSR508FPI_counts_pattern_4.n_244-vs-KLF15-201.alignment counts-znf_b1h_alignment/KLF15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF15-201/pos_patterns.ENCSR860ONE_ChIP_KLF15_HepG2_ENCSR508FPI_counts_pattern_5.n_126-vs-KLF15-201.alignment counts-znf_b1h_alignment/KLF15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR009KLQ_ChIP_KLF16_HepG2_ENCSR911FYQ_counts_pattern_0.n_5461-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR009KLQ_ChIP_KLF16_HepG2_ENCSR911FYQ_counts_pattern_10.n_166-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR009KLQ_ChIP_KLF16_HepG2_ENCSR911FYQ_counts_pattern_11.n_125-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR009KLQ_ChIP_KLF16_HepG2_ENCSR911FYQ_counts_pattern_12.n_108-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR009KLQ_ChIP_KLF16_HepG2_ENCSR911FYQ_counts_pattern_13.n_50-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR009KLQ_ChIP_KLF16_HepG2_ENCSR911FYQ_counts_pattern_14.n_40-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR009KLQ_ChIP_KLF16_HepG2_ENCSR911FYQ_counts_pattern_15.n_37-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR009KLQ_ChIP_KLF16_HepG2_ENCSR911FYQ_counts_pattern_16.n_29-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR009KLQ_ChIP_KLF16_HepG2_ENCSR911FYQ_counts_pattern_17.n_26-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR009KLQ_ChIP_KLF16_HepG2_ENCSR911FYQ_counts_pattern_18.n_21-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR009KLQ_ChIP_KLF16_HepG2_ENCSR911FYQ_counts_pattern_1.n_3343-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR009KLQ_ChIP_KLF16_HepG2_ENCSR911FYQ_counts_pattern_2.n_3107-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR009KLQ_ChIP_KLF16_HepG2_ENCSR911FYQ_counts_pattern_3.n_2941-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR009KLQ_ChIP_KLF16_HepG2_ENCSR911FYQ_counts_pattern_4.n_1038-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR009KLQ_ChIP_KLF16_HepG2_ENCSR911FYQ_counts_pattern_5.n_973-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR009KLQ_ChIP_KLF16_HepG2_ENCSR911FYQ_counts_pattern_6.n_822-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR009KLQ_ChIP_KLF16_HepG2_ENCSR911FYQ_counts_pattern_7.n_760-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR009KLQ_ChIP_KLF16_HepG2_ENCSR911FYQ_counts_pattern_8.n_542-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR009KLQ_ChIP_KLF16_HepG2_ENCSR911FYQ_counts_pattern_9.n_514-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR397DQC_ChIP_KLF16_HEK293_ENCSR401QUW_counts_pattern_0.n_6725-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR397DQC_ChIP_KLF16_HEK293_ENCSR401QUW_counts_pattern_1.n_927-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR397DQC_ChIP_KLF16_HEK293_ENCSR401QUW_counts_pattern_2.n_756-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR397DQC_ChIP_KLF16_HEK293_ENCSR401QUW_counts_pattern_3.n_600-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR397DQC_ChIP_KLF16_HEK293_ENCSR401QUW_counts_pattern_4.n_457-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR397DQC_ChIP_KLF16_HEK293_ENCSR401QUW_counts_pattern_5.n_257-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR397DQC_ChIP_KLF16_HEK293_ENCSR401QUW_counts_pattern_6.n_157-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR397DQC_ChIP_KLF16_HEK293_ENCSR401QUW_counts_pattern_7.n_136-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR397DQC_ChIP_KLF16_HEK293_ENCSR401QUW_counts_pattern_8.n_55-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR397DQC_ChIP_KLF16_HEK293_ENCSR401QUW_counts_pattern_9.n_28-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR760UVO_ChIP_KLF16_K562_ENCSR904YCG_counts_pattern_0.n_13822-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR760UVO_ChIP_KLF16_K562_ENCSR904YCG_counts_pattern_1.n_5508-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR760UVO_ChIP_KLF16_K562_ENCSR904YCG_counts_pattern_2.n_1012-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR760UVO_ChIP_KLF16_K562_ENCSR904YCG_counts_pattern_3.n_331-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR760UVO_ChIP_KLF16_K562_ENCSR904YCG_counts_pattern_4.n_119-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR760UVO_ChIP_KLF16_K562_ENCSR904YCG_counts_pattern_5.n_84-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR760UVO_ChIP_KLF16_K562_ENCSR904YCG_counts_pattern_6.n_73-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR760UVO_ChIP_KLF16_K562_ENCSR904YCG_counts_pattern_7.n_69-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR760UVO_ChIP_KLF16_K562_ENCSR904YCG_counts_pattern_8.n_64-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR760UVO_ChIP_KLF16_K562_ENCSR904YCG_counts_pattern_9.n_33-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR913KJZ_ChIP_KLF16_HepG2_ENCSR718YYO_counts_pattern_0.n_920-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR913KJZ_ChIP_KLF16_HepG2_ENCSR718YYO_counts_pattern_1.n_701-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR913KJZ_ChIP_KLF16_HepG2_ENCSR718YYO_counts_pattern_2.n_189-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR913KJZ_ChIP_KLF16_HepG2_ENCSR718YYO_counts_pattern_3.n_115-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR913KJZ_ChIP_KLF16_HepG2_ENCSR718YYO_counts_pattern_4.n_109-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR913KJZ_ChIP_KLF16_HepG2_ENCSR718YYO_counts_pattern_5.n_104-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR913KJZ_ChIP_KLF16_HepG2_ENCSR718YYO_counts_pattern_6.n_98-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR913KJZ_ChIP_KLF16_HepG2_ENCSR718YYO_counts_pattern_7.n_79-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-201/pos_patterns.ENCSR913KJZ_ChIP_KLF16_HepG2_ENCSR718YYO_counts_pattern_8.n_55-vs-KLF16-201.alignment counts-znf_b1h_alignment/KLF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR009KLQ_ChIP_KLF16_HepG2_ENCSR911FYQ_counts_pattern_0.n_5461-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR009KLQ_ChIP_KLF16_HepG2_ENCSR911FYQ_counts_pattern_10.n_166-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR009KLQ_ChIP_KLF16_HepG2_ENCSR911FYQ_counts_pattern_11.n_125-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR009KLQ_ChIP_KLF16_HepG2_ENCSR911FYQ_counts_pattern_12.n_108-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR009KLQ_ChIP_KLF16_HepG2_ENCSR911FYQ_counts_pattern_13.n_50-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR009KLQ_ChIP_KLF16_HepG2_ENCSR911FYQ_counts_pattern_14.n_40-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR009KLQ_ChIP_KLF16_HepG2_ENCSR911FYQ_counts_pattern_15.n_37-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR009KLQ_ChIP_KLF16_HepG2_ENCSR911FYQ_counts_pattern_16.n_29-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR009KLQ_ChIP_KLF16_HepG2_ENCSR911FYQ_counts_pattern_17.n_26-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR009KLQ_ChIP_KLF16_HepG2_ENCSR911FYQ_counts_pattern_18.n_21-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR009KLQ_ChIP_KLF16_HepG2_ENCSR911FYQ_counts_pattern_1.n_3343-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR009KLQ_ChIP_KLF16_HepG2_ENCSR911FYQ_counts_pattern_2.n_3107-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR009KLQ_ChIP_KLF16_HepG2_ENCSR911FYQ_counts_pattern_3.n_2941-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR009KLQ_ChIP_KLF16_HepG2_ENCSR911FYQ_counts_pattern_4.n_1038-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR009KLQ_ChIP_KLF16_HepG2_ENCSR911FYQ_counts_pattern_5.n_973-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR009KLQ_ChIP_KLF16_HepG2_ENCSR911FYQ_counts_pattern_6.n_822-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR009KLQ_ChIP_KLF16_HepG2_ENCSR911FYQ_counts_pattern_7.n_760-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR009KLQ_ChIP_KLF16_HepG2_ENCSR911FYQ_counts_pattern_8.n_542-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR009KLQ_ChIP_KLF16_HepG2_ENCSR911FYQ_counts_pattern_9.n_514-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR397DQC_ChIP_KLF16_HEK293_ENCSR401QUW_counts_pattern_0.n_6725-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR397DQC_ChIP_KLF16_HEK293_ENCSR401QUW_counts_pattern_1.n_927-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR397DQC_ChIP_KLF16_HEK293_ENCSR401QUW_counts_pattern_2.n_756-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR397DQC_ChIP_KLF16_HEK293_ENCSR401QUW_counts_pattern_3.n_600-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR397DQC_ChIP_KLF16_HEK293_ENCSR401QUW_counts_pattern_4.n_457-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR397DQC_ChIP_KLF16_HEK293_ENCSR401QUW_counts_pattern_5.n_257-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR397DQC_ChIP_KLF16_HEK293_ENCSR401QUW_counts_pattern_6.n_157-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR397DQC_ChIP_KLF16_HEK293_ENCSR401QUW_counts_pattern_7.n_136-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR397DQC_ChIP_KLF16_HEK293_ENCSR401QUW_counts_pattern_8.n_55-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR397DQC_ChIP_KLF16_HEK293_ENCSR401QUW_counts_pattern_9.n_28-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR760UVO_ChIP_KLF16_K562_ENCSR904YCG_counts_pattern_0.n_13822-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR760UVO_ChIP_KLF16_K562_ENCSR904YCG_counts_pattern_1.n_5508-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR760UVO_ChIP_KLF16_K562_ENCSR904YCG_counts_pattern_2.n_1012-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR760UVO_ChIP_KLF16_K562_ENCSR904YCG_counts_pattern_3.n_331-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR760UVO_ChIP_KLF16_K562_ENCSR904YCG_counts_pattern_4.n_119-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR760UVO_ChIP_KLF16_K562_ENCSR904YCG_counts_pattern_5.n_84-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR760UVO_ChIP_KLF16_K562_ENCSR904YCG_counts_pattern_6.n_73-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR760UVO_ChIP_KLF16_K562_ENCSR904YCG_counts_pattern_7.n_69-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR760UVO_ChIP_KLF16_K562_ENCSR904YCG_counts_pattern_8.n_64-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR760UVO_ChIP_KLF16_K562_ENCSR904YCG_counts_pattern_9.n_33-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR913KJZ_ChIP_KLF16_HepG2_ENCSR718YYO_counts_pattern_0.n_920-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR913KJZ_ChIP_KLF16_HepG2_ENCSR718YYO_counts_pattern_1.n_701-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR913KJZ_ChIP_KLF16_HepG2_ENCSR718YYO_counts_pattern_2.n_189-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR913KJZ_ChIP_KLF16_HepG2_ENCSR718YYO_counts_pattern_3.n_115-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR913KJZ_ChIP_KLF16_HepG2_ENCSR718YYO_counts_pattern_4.n_109-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR913KJZ_ChIP_KLF16_HepG2_ENCSR718YYO_counts_pattern_5.n_104-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR913KJZ_ChIP_KLF16_HepG2_ENCSR718YYO_counts_pattern_6.n_98-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR913KJZ_ChIP_KLF16_HepG2_ENCSR718YYO_counts_pattern_7.n_79-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF16-203/pos_patterns.ENCSR913KJZ_ChIP_KLF16_HepG2_ENCSR718YYO_counts_pattern_8.n_55-vs-KLF16-203.alignment counts-znf_b1h_alignment/KLF16-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF17-201/pos_patterns.ENCSR065WUF_ChIP_KLF17_HEK293_ENCSR225AAV_counts_pattern_0.n_6083-vs-KLF17-201.alignment counts-znf_b1h_alignment/KLF17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF17-201/pos_patterns.ENCSR065WUF_ChIP_KLF17_HEK293_ENCSR225AAV_counts_pattern_10.n_39-vs-KLF17-201.alignment counts-znf_b1h_alignment/KLF17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF17-201/pos_patterns.ENCSR065WUF_ChIP_KLF17_HEK293_ENCSR225AAV_counts_pattern_11.n_29-vs-KLF17-201.alignment counts-znf_b1h_alignment/KLF17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF17-201/pos_patterns.ENCSR065WUF_ChIP_KLF17_HEK293_ENCSR225AAV_counts_pattern_1.n_4039-vs-KLF17-201.alignment counts-znf_b1h_alignment/KLF17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF17-201/pos_patterns.ENCSR065WUF_ChIP_KLF17_HEK293_ENCSR225AAV_counts_pattern_2.n_2098-vs-KLF17-201.alignment counts-znf_b1h_alignment/KLF17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF17-201/pos_patterns.ENCSR065WUF_ChIP_KLF17_HEK293_ENCSR225AAV_counts_pattern_3.n_356-vs-KLF17-201.alignment counts-znf_b1h_alignment/KLF17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF17-201/pos_patterns.ENCSR065WUF_ChIP_KLF17_HEK293_ENCSR225AAV_counts_pattern_4.n_330-vs-KLF17-201.alignment counts-znf_b1h_alignment/KLF17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF17-201/pos_patterns.ENCSR065WUF_ChIP_KLF17_HEK293_ENCSR225AAV_counts_pattern_5.n_227-vs-KLF17-201.alignment counts-znf_b1h_alignment/KLF17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF17-201/pos_patterns.ENCSR065WUF_ChIP_KLF17_HEK293_ENCSR225AAV_counts_pattern_6.n_208-vs-KLF17-201.alignment counts-znf_b1h_alignment/KLF17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF17-201/pos_patterns.ENCSR065WUF_ChIP_KLF17_HEK293_ENCSR225AAV_counts_pattern_7.n_131-vs-KLF17-201.alignment counts-znf_b1h_alignment/KLF17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF17-201/pos_patterns.ENCSR065WUF_ChIP_KLF17_HEK293_ENCSR225AAV_counts_pattern_8.n_130-vs-KLF17-201.alignment counts-znf_b1h_alignment/KLF17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF17-201/pos_patterns.ENCSR065WUF_ChIP_KLF17_HEK293_ENCSR225AAV_counts_pattern_9.n_105-vs-KLF17-201.alignment counts-znf_b1h_alignment/KLF17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF4-201/pos_patterns.ENCSR265WJC_ChIP_KLF4_MCF-7_ENCSR929TKD_counts_pattern_0.n_8372-vs-KLF4-201.alignment counts-znf_b1h_alignment/KLF4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF4-201/pos_patterns.ENCSR265WJC_ChIP_KLF4_MCF-7_ENCSR929TKD_counts_pattern_1.n_808-vs-KLF4-201.alignment counts-znf_b1h_alignment/KLF4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF4-201/pos_patterns.ENCSR265WJC_ChIP_KLF4_MCF-7_ENCSR929TKD_counts_pattern_2.n_714-vs-KLF4-201.alignment counts-znf_b1h_alignment/KLF4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF4-201/pos_patterns.ENCSR265WJC_ChIP_KLF4_MCF-7_ENCSR929TKD_counts_pattern_3.n_279-vs-KLF4-201.alignment counts-znf_b1h_alignment/KLF4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF4-201/pos_patterns.ENCSR265WJC_ChIP_KLF4_MCF-7_ENCSR929TKD_counts_pattern_4.n_94-vs-KLF4-201.alignment counts-znf_b1h_alignment/KLF4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF4-201/pos_patterns.ENCSR265WJC_ChIP_KLF4_MCF-7_ENCSR929TKD_counts_pattern_5.n_48-vs-KLF4-201.alignment counts-znf_b1h_alignment/KLF4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF4-201/pos_patterns.ENCSR265WJC_ChIP_KLF4_MCF-7_ENCSR929TKD_counts_pattern_6.n_28-vs-KLF4-201.alignment counts-znf_b1h_alignment/KLF4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-204/neg_patterns.ENCSR297CGF_ChIP_KLF6_K562_ENCSR721YCL_counts_pattern_0.n_25-vs-KLF6-204.alignment counts-znf_b1h_alignment/KLF6-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-204/neg_patterns.ENCSR297CGF_ChIP_KLF6_K562_ENCSR721YCL_counts_pattern_1.n_23-vs-KLF6-204.alignment counts-znf_b1h_alignment/KLF6-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-204/neg_patterns.ENCSR297CGF_ChIP_KLF6_K562_ENCSR721YCL_counts_pattern_2.n_23-vs-KLF6-204.alignment counts-znf_b1h_alignment/KLF6-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-204/neg_patterns.ENCSR297CGF_ChIP_KLF6_K562_ENCSR721YCL_counts_pattern_3.n_20-vs-KLF6-204.alignment counts-znf_b1h_alignment/KLF6-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-204/pos_patterns.ENCSR297CGF_ChIP_KLF6_K562_ENCSR721YCL_counts_pattern_0.n_2320-vs-KLF6-204.alignment counts-znf_b1h_alignment/KLF6-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-204/pos_patterns.ENCSR297CGF_ChIP_KLF6_K562_ENCSR721YCL_counts_pattern_1.n_124-vs-KLF6-204.alignment counts-znf_b1h_alignment/KLF6-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-204/pos_patterns.ENCSR297CGF_ChIP_KLF6_K562_ENCSR721YCL_counts_pattern_2.n_112-vs-KLF6-204.alignment counts-znf_b1h_alignment/KLF6-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-204/pos_patterns.ENCSR297CGF_ChIP_KLF6_K562_ENCSR721YCL_counts_pattern_3.n_95-vs-KLF6-204.alignment counts-znf_b1h_alignment/KLF6-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-204/pos_patterns.ENCSR297CGF_ChIP_KLF6_K562_ENCSR721YCL_counts_pattern_4.n_73-vs-KLF6-204.alignment counts-znf_b1h_alignment/KLF6-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-204/pos_patterns.ENCSR297CGF_ChIP_KLF6_K562_ENCSR721YCL_counts_pattern_5.n_70-vs-KLF6-204.alignment counts-znf_b1h_alignment/KLF6-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-204/pos_patterns.ENCSR297CGF_ChIP_KLF6_K562_ENCSR721YCL_counts_pattern_6.n_63-vs-KLF6-204.alignment counts-znf_b1h_alignment/KLF6-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-204/pos_patterns.ENCSR297CGF_ChIP_KLF6_K562_ENCSR721YCL_counts_pattern_7.n_60-vs-KLF6-204.alignment counts-znf_b1h_alignment/KLF6-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-204/pos_patterns.ENCSR297CGF_ChIP_KLF6_K562_ENCSR721YCL_counts_pattern_8.n_59-vs-KLF6-204.alignment counts-znf_b1h_alignment/KLF6-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-204/pos_patterns.ENCSR297CGF_ChIP_KLF6_K562_ENCSR721YCL_counts_pattern_9.n_26-vs-KLF6-204.alignment counts-znf_b1h_alignment/KLF6-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-204/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_0.n_2645-vs-KLF6-204.alignment counts-znf_b1h_alignment/KLF6-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-204/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_10.n_400-vs-KLF6-204.alignment counts-znf_b1h_alignment/KLF6-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-204/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_11.n_376-vs-KLF6-204.alignment counts-znf_b1h_alignment/KLF6-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-204/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_12.n_169-vs-KLF6-204.alignment counts-znf_b1h_alignment/KLF6-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-204/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_13.n_143-vs-KLF6-204.alignment counts-znf_b1h_alignment/KLF6-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-204/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_14.n_111-vs-KLF6-204.alignment counts-znf_b1h_alignment/KLF6-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-204/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_15.n_50-vs-KLF6-204.alignment counts-znf_b1h_alignment/KLF6-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-204/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_16.n_31-vs-KLF6-204.alignment counts-znf_b1h_alignment/KLF6-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-204/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_17.n_23-vs-KLF6-204.alignment counts-znf_b1h_alignment/KLF6-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-204/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_1.n_2562-vs-KLF6-204.alignment counts-znf_b1h_alignment/KLF6-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-204/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_2.n_1534-vs-KLF6-204.alignment counts-znf_b1h_alignment/KLF6-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-204/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_3.n_821-vs-KLF6-204.alignment counts-znf_b1h_alignment/KLF6-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-204/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_4.n_546-vs-KLF6-204.alignment counts-znf_b1h_alignment/KLF6-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-204/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_5.n_506-vs-KLF6-204.alignment counts-znf_b1h_alignment/KLF6-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-204/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_6.n_491-vs-KLF6-204.alignment counts-znf_b1h_alignment/KLF6-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-204/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_7.n_478-vs-KLF6-204.alignment counts-znf_b1h_alignment/KLF6-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-204/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_8.n_475-vs-KLF6-204.alignment counts-znf_b1h_alignment/KLF6-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-204/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_9.n_466-vs-KLF6-204.alignment counts-znf_b1h_alignment/KLF6-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-206/neg_patterns.ENCSR297CGF_ChIP_KLF6_K562_ENCSR721YCL_counts_pattern_0.n_25-vs-KLF6-206.alignment counts-znf_b1h_alignment/KLF6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-206/neg_patterns.ENCSR297CGF_ChIP_KLF6_K562_ENCSR721YCL_counts_pattern_1.n_23-vs-KLF6-206.alignment counts-znf_b1h_alignment/KLF6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-206/neg_patterns.ENCSR297CGF_ChIP_KLF6_K562_ENCSR721YCL_counts_pattern_2.n_23-vs-KLF6-206.alignment counts-znf_b1h_alignment/KLF6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-206/neg_patterns.ENCSR297CGF_ChIP_KLF6_K562_ENCSR721YCL_counts_pattern_3.n_20-vs-KLF6-206.alignment counts-znf_b1h_alignment/KLF6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-206/pos_patterns.ENCSR297CGF_ChIP_KLF6_K562_ENCSR721YCL_counts_pattern_0.n_2320-vs-KLF6-206.alignment counts-znf_b1h_alignment/KLF6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-206/pos_patterns.ENCSR297CGF_ChIP_KLF6_K562_ENCSR721YCL_counts_pattern_1.n_124-vs-KLF6-206.alignment counts-znf_b1h_alignment/KLF6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-206/pos_patterns.ENCSR297CGF_ChIP_KLF6_K562_ENCSR721YCL_counts_pattern_2.n_112-vs-KLF6-206.alignment counts-znf_b1h_alignment/KLF6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-206/pos_patterns.ENCSR297CGF_ChIP_KLF6_K562_ENCSR721YCL_counts_pattern_3.n_95-vs-KLF6-206.alignment counts-znf_b1h_alignment/KLF6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-206/pos_patterns.ENCSR297CGF_ChIP_KLF6_K562_ENCSR721YCL_counts_pattern_4.n_73-vs-KLF6-206.alignment counts-znf_b1h_alignment/KLF6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-206/pos_patterns.ENCSR297CGF_ChIP_KLF6_K562_ENCSR721YCL_counts_pattern_5.n_70-vs-KLF6-206.alignment counts-znf_b1h_alignment/KLF6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-206/pos_patterns.ENCSR297CGF_ChIP_KLF6_K562_ENCSR721YCL_counts_pattern_6.n_63-vs-KLF6-206.alignment counts-znf_b1h_alignment/KLF6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-206/pos_patterns.ENCSR297CGF_ChIP_KLF6_K562_ENCSR721YCL_counts_pattern_7.n_60-vs-KLF6-206.alignment counts-znf_b1h_alignment/KLF6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-206/pos_patterns.ENCSR297CGF_ChIP_KLF6_K562_ENCSR721YCL_counts_pattern_8.n_59-vs-KLF6-206.alignment counts-znf_b1h_alignment/KLF6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-206/pos_patterns.ENCSR297CGF_ChIP_KLF6_K562_ENCSR721YCL_counts_pattern_9.n_26-vs-KLF6-206.alignment counts-znf_b1h_alignment/KLF6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-206/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_0.n_2645-vs-KLF6-206.alignment counts-znf_b1h_alignment/KLF6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-206/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_10.n_400-vs-KLF6-206.alignment counts-znf_b1h_alignment/KLF6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-206/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_11.n_376-vs-KLF6-206.alignment counts-znf_b1h_alignment/KLF6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-206/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_12.n_169-vs-KLF6-206.alignment counts-znf_b1h_alignment/KLF6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-206/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_13.n_143-vs-KLF6-206.alignment counts-znf_b1h_alignment/KLF6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-206/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_14.n_111-vs-KLF6-206.alignment counts-znf_b1h_alignment/KLF6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-206/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_15.n_50-vs-KLF6-206.alignment counts-znf_b1h_alignment/KLF6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-206/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_16.n_31-vs-KLF6-206.alignment counts-znf_b1h_alignment/KLF6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-206/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_17.n_23-vs-KLF6-206.alignment counts-znf_b1h_alignment/KLF6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-206/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_1.n_2562-vs-KLF6-206.alignment counts-znf_b1h_alignment/KLF6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-206/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_2.n_1534-vs-KLF6-206.alignment counts-znf_b1h_alignment/KLF6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-206/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_3.n_821-vs-KLF6-206.alignment counts-znf_b1h_alignment/KLF6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-206/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_4.n_546-vs-KLF6-206.alignment counts-znf_b1h_alignment/KLF6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-206/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_5.n_506-vs-KLF6-206.alignment counts-znf_b1h_alignment/KLF6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-206/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_6.n_491-vs-KLF6-206.alignment counts-znf_b1h_alignment/KLF6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-206/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_7.n_478-vs-KLF6-206.alignment counts-znf_b1h_alignment/KLF6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-206/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_8.n_475-vs-KLF6-206.alignment counts-znf_b1h_alignment/KLF6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-206/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_9.n_466-vs-KLF6-206.alignment counts-znf_b1h_alignment/KLF6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-207/neg_patterns.ENCSR297CGF_ChIP_KLF6_K562_ENCSR721YCL_counts_pattern_0.n_25-vs-KLF6-207.alignment counts-znf_b1h_alignment/KLF6-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-207/neg_patterns.ENCSR297CGF_ChIP_KLF6_K562_ENCSR721YCL_counts_pattern_1.n_23-vs-KLF6-207.alignment counts-znf_b1h_alignment/KLF6-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-207/neg_patterns.ENCSR297CGF_ChIP_KLF6_K562_ENCSR721YCL_counts_pattern_2.n_23-vs-KLF6-207.alignment counts-znf_b1h_alignment/KLF6-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-207/neg_patterns.ENCSR297CGF_ChIP_KLF6_K562_ENCSR721YCL_counts_pattern_3.n_20-vs-KLF6-207.alignment counts-znf_b1h_alignment/KLF6-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-207/pos_patterns.ENCSR297CGF_ChIP_KLF6_K562_ENCSR721YCL_counts_pattern_0.n_2320-vs-KLF6-207.alignment counts-znf_b1h_alignment/KLF6-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-207/pos_patterns.ENCSR297CGF_ChIP_KLF6_K562_ENCSR721YCL_counts_pattern_1.n_124-vs-KLF6-207.alignment counts-znf_b1h_alignment/KLF6-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-207/pos_patterns.ENCSR297CGF_ChIP_KLF6_K562_ENCSR721YCL_counts_pattern_2.n_112-vs-KLF6-207.alignment counts-znf_b1h_alignment/KLF6-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-207/pos_patterns.ENCSR297CGF_ChIP_KLF6_K562_ENCSR721YCL_counts_pattern_3.n_95-vs-KLF6-207.alignment counts-znf_b1h_alignment/KLF6-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-207/pos_patterns.ENCSR297CGF_ChIP_KLF6_K562_ENCSR721YCL_counts_pattern_4.n_73-vs-KLF6-207.alignment counts-znf_b1h_alignment/KLF6-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-207/pos_patterns.ENCSR297CGF_ChIP_KLF6_K562_ENCSR721YCL_counts_pattern_5.n_70-vs-KLF6-207.alignment counts-znf_b1h_alignment/KLF6-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-207/pos_patterns.ENCSR297CGF_ChIP_KLF6_K562_ENCSR721YCL_counts_pattern_6.n_63-vs-KLF6-207.alignment counts-znf_b1h_alignment/KLF6-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-207/pos_patterns.ENCSR297CGF_ChIP_KLF6_K562_ENCSR721YCL_counts_pattern_7.n_60-vs-KLF6-207.alignment counts-znf_b1h_alignment/KLF6-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-207/pos_patterns.ENCSR297CGF_ChIP_KLF6_K562_ENCSR721YCL_counts_pattern_8.n_59-vs-KLF6-207.alignment counts-znf_b1h_alignment/KLF6-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-207/pos_patterns.ENCSR297CGF_ChIP_KLF6_K562_ENCSR721YCL_counts_pattern_9.n_26-vs-KLF6-207.alignment counts-znf_b1h_alignment/KLF6-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-207/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_0.n_2645-vs-KLF6-207.alignment counts-znf_b1h_alignment/KLF6-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-207/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_10.n_400-vs-KLF6-207.alignment counts-znf_b1h_alignment/KLF6-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-207/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_11.n_376-vs-KLF6-207.alignment counts-znf_b1h_alignment/KLF6-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-207/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_12.n_169-vs-KLF6-207.alignment counts-znf_b1h_alignment/KLF6-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-207/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_13.n_143-vs-KLF6-207.alignment counts-znf_b1h_alignment/KLF6-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-207/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_14.n_111-vs-KLF6-207.alignment counts-znf_b1h_alignment/KLF6-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-207/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_15.n_50-vs-KLF6-207.alignment counts-znf_b1h_alignment/KLF6-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-207/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_16.n_31-vs-KLF6-207.alignment counts-znf_b1h_alignment/KLF6-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-207/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_17.n_23-vs-KLF6-207.alignment counts-znf_b1h_alignment/KLF6-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-207/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_1.n_2562-vs-KLF6-207.alignment counts-znf_b1h_alignment/KLF6-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-207/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_2.n_1534-vs-KLF6-207.alignment counts-znf_b1h_alignment/KLF6-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-207/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_3.n_821-vs-KLF6-207.alignment counts-znf_b1h_alignment/KLF6-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-207/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_4.n_546-vs-KLF6-207.alignment counts-znf_b1h_alignment/KLF6-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-207/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_5.n_506-vs-KLF6-207.alignment counts-znf_b1h_alignment/KLF6-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-207/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_6.n_491-vs-KLF6-207.alignment counts-znf_b1h_alignment/KLF6-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-207/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_7.n_478-vs-KLF6-207.alignment counts-znf_b1h_alignment/KLF6-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-207/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_8.n_475-vs-KLF6-207.alignment counts-znf_b1h_alignment/KLF6-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF6-207/pos_patterns.ENCSR757EKM_ChIP_KLF6_HepG2_ENCSR327WUN_counts_pattern_9.n_466-vs-KLF6-207.alignment counts-znf_b1h_alignment/KLF6-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF7-201/Hughes_GR_models_KLF7_counts-pos.pattern_0.n_47-vs-KLF7-201.alignment counts-znf_b1h_alignment/KLF7-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF7-201/Hughes_GR_models_KLF7_counts-pos.pattern_1.n_32-vs-KLF7-201.alignment counts-znf_b1h_alignment/KLF7-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF7-201/Hughes_GR_models_KLF7_counts-pos.pattern_2.n_27-vs-KLF7-201.alignment counts-znf_b1h_alignment/KLF7-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF7-201/Hughes_GR_models_KLF7_counts-pos.pattern_3.n_23-vs-KLF7-201.alignment counts-znf_b1h_alignment/KLF7-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF7-201/Hughes_GR_models_KLF7_counts-pos.pattern_4.n_22-vs-KLF7-201.alignment counts-znf_b1h_alignment/KLF7-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF7-201/Hughes_GR_models_KLF7_counts-pos.pattern_5.n_20-vs-KLF7-201.alignment counts-znf_b1h_alignment/KLF7-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF7-201/Hughes_GR_models_KLF7_counts-pos.pattern_6.n_19-vs-KLF7-201.alignment counts-znf_b1h_alignment/KLF7-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF7-201/pos_patterns.ENCSR604VWJ_ChIP_KLF7_HEK293_ENCSR374OIO_counts_pattern_0.n_4579-vs-KLF7-201.alignment counts-znf_b1h_alignment/KLF7-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF7-201/pos_patterns.ENCSR604VWJ_ChIP_KLF7_HEK293_ENCSR374OIO_counts_pattern_1.n_422-vs-KLF7-201.alignment counts-znf_b1h_alignment/KLF7-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF7-201/pos_patterns.ENCSR604VWJ_ChIP_KLF7_HEK293_ENCSR374OIO_counts_pattern_2.n_405-vs-KLF7-201.alignment counts-znf_b1h_alignment/KLF7-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF7-201/pos_patterns.ENCSR604VWJ_ChIP_KLF7_HEK293_ENCSR374OIO_counts_pattern_3.n_262-vs-KLF7-201.alignment counts-znf_b1h_alignment/KLF7-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF8-204/pos_patterns.ENCSR635NOQ_ChIP_KLF8_HEK293_ENCSR985CNW_counts_pattern_0.n_4620-vs-KLF8-204.alignment counts-znf_b1h_alignment/KLF8-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF8-204/pos_patterns.ENCSR635NOQ_ChIP_KLF8_HEK293_ENCSR985CNW_counts_pattern_10.n_279-vs-KLF8-204.alignment counts-znf_b1h_alignment/KLF8-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF8-204/pos_patterns.ENCSR635NOQ_ChIP_KLF8_HEK293_ENCSR985CNW_counts_pattern_11.n_244-vs-KLF8-204.alignment counts-znf_b1h_alignment/KLF8-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF8-204/pos_patterns.ENCSR635NOQ_ChIP_KLF8_HEK293_ENCSR985CNW_counts_pattern_12.n_202-vs-KLF8-204.alignment counts-znf_b1h_alignment/KLF8-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF8-204/pos_patterns.ENCSR635NOQ_ChIP_KLF8_HEK293_ENCSR985CNW_counts_pattern_13.n_150-vs-KLF8-204.alignment counts-znf_b1h_alignment/KLF8-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF8-204/pos_patterns.ENCSR635NOQ_ChIP_KLF8_HEK293_ENCSR985CNW_counts_pattern_14.n_142-vs-KLF8-204.alignment counts-znf_b1h_alignment/KLF8-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF8-204/pos_patterns.ENCSR635NOQ_ChIP_KLF8_HEK293_ENCSR985CNW_counts_pattern_15.n_98-vs-KLF8-204.alignment counts-znf_b1h_alignment/KLF8-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF8-204/pos_patterns.ENCSR635NOQ_ChIP_KLF8_HEK293_ENCSR985CNW_counts_pattern_16.n_95-vs-KLF8-204.alignment counts-znf_b1h_alignment/KLF8-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF8-204/pos_patterns.ENCSR635NOQ_ChIP_KLF8_HEK293_ENCSR985CNW_counts_pattern_17.n_77-vs-KLF8-204.alignment counts-znf_b1h_alignment/KLF8-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF8-204/pos_patterns.ENCSR635NOQ_ChIP_KLF8_HEK293_ENCSR985CNW_counts_pattern_18.n_61-vs-KLF8-204.alignment counts-znf_b1h_alignment/KLF8-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF8-204/pos_patterns.ENCSR635NOQ_ChIP_KLF8_HEK293_ENCSR985CNW_counts_pattern_19.n_54-vs-KLF8-204.alignment counts-znf_b1h_alignment/KLF8-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF8-204/pos_patterns.ENCSR635NOQ_ChIP_KLF8_HEK293_ENCSR985CNW_counts_pattern_1.n_2971-vs-KLF8-204.alignment counts-znf_b1h_alignment/KLF8-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF8-204/pos_patterns.ENCSR635NOQ_ChIP_KLF8_HEK293_ENCSR985CNW_counts_pattern_20.n_51-vs-KLF8-204.alignment counts-znf_b1h_alignment/KLF8-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF8-204/pos_patterns.ENCSR635NOQ_ChIP_KLF8_HEK293_ENCSR985CNW_counts_pattern_21.n_45-vs-KLF8-204.alignment counts-znf_b1h_alignment/KLF8-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF8-204/pos_patterns.ENCSR635NOQ_ChIP_KLF8_HEK293_ENCSR985CNW_counts_pattern_22.n_40-vs-KLF8-204.alignment counts-znf_b1h_alignment/KLF8-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF8-204/pos_patterns.ENCSR635NOQ_ChIP_KLF8_HEK293_ENCSR985CNW_counts_pattern_2.n_2447-vs-KLF8-204.alignment counts-znf_b1h_alignment/KLF8-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF8-204/pos_patterns.ENCSR635NOQ_ChIP_KLF8_HEK293_ENCSR985CNW_counts_pattern_3.n_1015-vs-KLF8-204.alignment counts-znf_b1h_alignment/KLF8-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF8-204/pos_patterns.ENCSR635NOQ_ChIP_KLF8_HEK293_ENCSR985CNW_counts_pattern_4.n_635-vs-KLF8-204.alignment counts-znf_b1h_alignment/KLF8-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF8-204/pos_patterns.ENCSR635NOQ_ChIP_KLF8_HEK293_ENCSR985CNW_counts_pattern_5.n_541-vs-KLF8-204.alignment counts-znf_b1h_alignment/KLF8-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF8-204/pos_patterns.ENCSR635NOQ_ChIP_KLF8_HEK293_ENCSR985CNW_counts_pattern_6.n_442-vs-KLF8-204.alignment counts-znf_b1h_alignment/KLF8-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF8-204/pos_patterns.ENCSR635NOQ_ChIP_KLF8_HEK293_ENCSR985CNW_counts_pattern_7.n_401-vs-KLF8-204.alignment counts-znf_b1h_alignment/KLF8-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF8-204/pos_patterns.ENCSR635NOQ_ChIP_KLF8_HEK293_ENCSR985CNW_counts_pattern_8.n_328-vs-KLF8-204.alignment counts-znf_b1h_alignment/KLF8-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF8-204/pos_patterns.ENCSR635NOQ_ChIP_KLF8_HEK293_ENCSR985CNW_counts_pattern_9.n_282-vs-KLF8-204.alignment counts-znf_b1h_alignment/KLF8-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF9-201/pos_patterns.ENCSR076EZB_ChIP_KLF9_HEK293_ENCSR847MYV_counts_pattern_0.n_16011-vs-KLF9-201.alignment counts-znf_b1h_alignment/KLF9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF9-201/pos_patterns.ENCSR076EZB_ChIP_KLF9_HEK293_ENCSR847MYV_counts_pattern_1.n_183-vs-KLF9-201.alignment counts-znf_b1h_alignment/KLF9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF9-201/pos_patterns.ENCSR076EZB_ChIP_KLF9_HEK293_ENCSR847MYV_counts_pattern_2.n_133-vs-KLF9-201.alignment counts-znf_b1h_alignment/KLF9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF9-201/pos_patterns.ENCSR076EZB_ChIP_KLF9_HEK293_ENCSR847MYV_counts_pattern_3.n_107-vs-KLF9-201.alignment counts-znf_b1h_alignment/KLF9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF9-201/pos_patterns.ENCSR076EZB_ChIP_KLF9_HEK293_ENCSR847MYV_counts_pattern_4.n_96-vs-KLF9-201.alignment counts-znf_b1h_alignment/KLF9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF9-201/pos_patterns.ENCSR076EZB_ChIP_KLF9_HEK293_ENCSR847MYV_counts_pattern_5.n_93-vs-KLF9-201.alignment counts-znf_b1h_alignment/KLF9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF9-201/pos_patterns.ENCSR076EZB_ChIP_KLF9_HEK293_ENCSR847MYV_counts_pattern_6.n_36-vs-KLF9-201.alignment counts-znf_b1h_alignment/KLF9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF9-201/pos_patterns.ENCSR125ZYC_ChIP_KLF9_MCF-7_ENCSR919ZUT_counts_pattern_0.n_18904-vs-KLF9-201.alignment counts-znf_b1h_alignment/KLF9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF9-201/pos_patterns.ENCSR938ETG_ChIP_KLF9_HepG2_ENCSR965WIT_counts_pattern_0.n_1528-vs-KLF9-201.alignment counts-znf_b1h_alignment/KLF9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF9-201/pos_patterns.ENCSR938ETG_ChIP_KLF9_HepG2_ENCSR965WIT_counts_pattern_10.n_192-vs-KLF9-201.alignment counts-znf_b1h_alignment/KLF9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF9-201/pos_patterns.ENCSR938ETG_ChIP_KLF9_HepG2_ENCSR965WIT_counts_pattern_11.n_179-vs-KLF9-201.alignment counts-znf_b1h_alignment/KLF9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF9-201/pos_patterns.ENCSR938ETG_ChIP_KLF9_HepG2_ENCSR965WIT_counts_pattern_12.n_157-vs-KLF9-201.alignment counts-znf_b1h_alignment/KLF9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF9-201/pos_patterns.ENCSR938ETG_ChIP_KLF9_HepG2_ENCSR965WIT_counts_pattern_13.n_135-vs-KLF9-201.alignment counts-znf_b1h_alignment/KLF9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF9-201/pos_patterns.ENCSR938ETG_ChIP_KLF9_HepG2_ENCSR965WIT_counts_pattern_14.n_121-vs-KLF9-201.alignment counts-znf_b1h_alignment/KLF9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF9-201/pos_patterns.ENCSR938ETG_ChIP_KLF9_HepG2_ENCSR965WIT_counts_pattern_15.n_85-vs-KLF9-201.alignment counts-znf_b1h_alignment/KLF9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF9-201/pos_patterns.ENCSR938ETG_ChIP_KLF9_HepG2_ENCSR965WIT_counts_pattern_16.n_83-vs-KLF9-201.alignment counts-znf_b1h_alignment/KLF9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF9-201/pos_patterns.ENCSR938ETG_ChIP_KLF9_HepG2_ENCSR965WIT_counts_pattern_17.n_31-vs-KLF9-201.alignment counts-znf_b1h_alignment/KLF9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF9-201/pos_patterns.ENCSR938ETG_ChIP_KLF9_HepG2_ENCSR965WIT_counts_pattern_18.n_28-vs-KLF9-201.alignment counts-znf_b1h_alignment/KLF9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF9-201/pos_patterns.ENCSR938ETG_ChIP_KLF9_HepG2_ENCSR965WIT_counts_pattern_1.n_682-vs-KLF9-201.alignment counts-znf_b1h_alignment/KLF9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF9-201/pos_patterns.ENCSR938ETG_ChIP_KLF9_HepG2_ENCSR965WIT_counts_pattern_2.n_623-vs-KLF9-201.alignment counts-znf_b1h_alignment/KLF9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF9-201/pos_patterns.ENCSR938ETG_ChIP_KLF9_HepG2_ENCSR965WIT_counts_pattern_3.n_601-vs-KLF9-201.alignment counts-znf_b1h_alignment/KLF9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF9-201/pos_patterns.ENCSR938ETG_ChIP_KLF9_HepG2_ENCSR965WIT_counts_pattern_4.n_270-vs-KLF9-201.alignment counts-znf_b1h_alignment/KLF9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF9-201/pos_patterns.ENCSR938ETG_ChIP_KLF9_HepG2_ENCSR965WIT_counts_pattern_5.n_254-vs-KLF9-201.alignment counts-znf_b1h_alignment/KLF9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF9-201/pos_patterns.ENCSR938ETG_ChIP_KLF9_HepG2_ENCSR965WIT_counts_pattern_6.n_251-vs-KLF9-201.alignment counts-znf_b1h_alignment/KLF9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF9-201/pos_patterns.ENCSR938ETG_ChIP_KLF9_HepG2_ENCSR965WIT_counts_pattern_7.n_226-vs-KLF9-201.alignment counts-znf_b1h_alignment/KLF9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF9-201/pos_patterns.ENCSR938ETG_ChIP_KLF9_HepG2_ENCSR965WIT_counts_pattern_8.n_223-vs-KLF9-201.alignment counts-znf_b1h_alignment/KLF9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/KLF9-201/pos_patterns.ENCSR938ETG_ChIP_KLF9_HepG2_ENCSR965WIT_counts_pattern_9.n_208-vs-KLF9-201.alignment counts-znf_b1h_alignment/KLF9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/Hughes_GR_models_MAZ_counts-pos.pattern_0.n_6935-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/Hughes_GR_models_MAZ_counts-pos.pattern_1.n_767-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/Hughes_GR_models_MAZ_counts-pos.pattern_2.n_310-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/Hughes_GR_models_MAZ_counts-pos.pattern_3.n_257-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/Hughes_GR_models_MAZ_counts-pos.pattern_4.n_189-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/Hughes_GR_models_MAZ_counts-pos.pattern_5.n_129-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/Hughes_GR_models_MAZ_counts-pos.pattern_6.n_61-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/Hughes_GR_models_MAZ_counts-pos.pattern_7.n_33-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_counts_pattern_0.n_9251-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_counts_pattern_1.n_2939-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_counts_pattern_2.n_719-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_counts_pattern_3.n_320-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_counts_pattern_4.n_31-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_counts_pattern_5.n_24-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_counts_pattern_6.n_21-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_counts_pattern_7.n_21-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_counts_pattern_0.n_6260-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_counts_pattern_1.n_2209-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_counts_pattern_2.n_1058-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_counts_pattern_3.n_703-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR000EDN_ChIP_MAZ_HepG2_ENCSR364YEH_counts_pattern_0.n_6439-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR000EDN_ChIP_MAZ_HepG2_ENCSR364YEH_counts_pattern_1.n_1375-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR000EDN_ChIP_MAZ_HepG2_ENCSR364YEH_counts_pattern_2.n_1125-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_counts_pattern_0.n_8593-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_counts_pattern_1.n_4059-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_counts_pattern_2.n_2998-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_counts_pattern_3.n_550-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_counts_pattern_4.n_297-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_counts_pattern_5.n_110-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_counts_pattern_6.n_91-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_counts_pattern_7.n_29-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_counts_pattern_8.n_27-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_counts_pattern_9.n_21-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_counts_pattern_0.n_11317-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_counts_pattern_10.n_32-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_counts_pattern_1.n_8805-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_counts_pattern_2.n_3791-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_counts_pattern_3.n_2010-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_counts_pattern_4.n_268-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_counts_pattern_5.n_72-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_counts_pattern_6.n_57-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_counts_pattern_7.n_52-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_counts_pattern_8.n_51-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_counts_pattern_9.n_48-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_counts_pattern_0.n_8211-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_counts_pattern_10.n_39-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_counts_pattern_1.n_7319-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_counts_pattern_2.n_1522-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_counts_pattern_3.n_1055-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_counts_pattern_4.n_452-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_counts_pattern_5.n_423-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_counts_pattern_6.n_62-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_counts_pattern_7.n_60-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_counts_pattern_8.n_47-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_counts_pattern_9.n_41-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR288IJC_ChIP_MAZ_MCF-7_ENCSR249QEG_counts_pattern_0.n_6812-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR288IJC_ChIP_MAZ_MCF-7_ENCSR249QEG_counts_pattern_1.n_972-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR288IJC_ChIP_MAZ_MCF-7_ENCSR249QEG_counts_pattern_2.n_882-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR288IJC_ChIP_MAZ_MCF-7_ENCSR249QEG_counts_pattern_3.n_337-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR288IJC_ChIP_MAZ_MCF-7_ENCSR249QEG_counts_pattern_4.n_59-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR288IJC_ChIP_MAZ_MCF-7_ENCSR249QEG_counts_pattern_5.n_33-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR290SSQ_ChIP_MAZ_HEK293_ENCSR821GPM_counts_pattern_0.n_16431-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR290SSQ_ChIP_MAZ_HEK293_ENCSR821GPM_counts_pattern_1.n_2356-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR290SSQ_ChIP_MAZ_HEK293_ENCSR821GPM_counts_pattern_2.n_1314-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR290SSQ_ChIP_MAZ_HEK293_ENCSR821GPM_counts_pattern_3.n_1190-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR290SSQ_ChIP_MAZ_HEK293_ENCSR821GPM_counts_pattern_4.n_823-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR290SSQ_ChIP_MAZ_HEK293_ENCSR821GPM_counts_pattern_5.n_413-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR636YLV_ChIP_MAZ_A549_ENCSR118TTR_counts_pattern_0.n_2412-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR636YLV_ChIP_MAZ_A549_ENCSR118TTR_counts_pattern_1.n_239-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR636YLV_ChIP_MAZ_A549_ENCSR118TTR_counts_pattern_2.n_149-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR636YLV_ChIP_MAZ_A549_ENCSR118TTR_counts_pattern_3.n_71-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_counts_pattern_0.n_7931-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_counts_pattern_1.n_2681-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_counts_pattern_2.n_1477-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_counts_pattern_3.n_647-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_counts_pattern_4.n_580-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_counts_pattern_5.n_440-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_counts_pattern_6.n_342-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_counts_pattern_7.n_138-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_counts_pattern_8.n_32-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_0.n_6611-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_10.n_290-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_11.n_275-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_12.n_254-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_13.n_153-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_14.n_146-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_15.n_89-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_16.n_87-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_17.n_35-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_18.n_35-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_19.n_22-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_1.n_3208-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_20.n_21-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_2.n_1672-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_3.n_1529-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_4.n_1286-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_5.n_1029-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_6.n_869-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_7.n_378-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_8.n_336-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_9.n_296-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_0.n_12866-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_10.n_32-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_11.n_32-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_1.n_1047-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_2.n_628-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_3.n_292-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_4.n_232-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_5.n_204-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_6.n_116-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_7.n_37-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_8.n_35-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-201/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_9.n_33-vs-MAZ-201.alignment counts-znf_b1h_alignment/MAZ-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/Hughes_GR_models_MAZ_counts-pos.pattern_0.n_6935-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/Hughes_GR_models_MAZ_counts-pos.pattern_1.n_767-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/Hughes_GR_models_MAZ_counts-pos.pattern_2.n_310-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/Hughes_GR_models_MAZ_counts-pos.pattern_3.n_257-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/Hughes_GR_models_MAZ_counts-pos.pattern_4.n_189-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/Hughes_GR_models_MAZ_counts-pos.pattern_5.n_129-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/Hughes_GR_models_MAZ_counts-pos.pattern_6.n_61-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/Hughes_GR_models_MAZ_counts-pos.pattern_7.n_33-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_counts_pattern_0.n_9251-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_counts_pattern_1.n_2939-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_counts_pattern_2.n_719-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_counts_pattern_3.n_320-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_counts_pattern_4.n_31-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_counts_pattern_5.n_24-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_counts_pattern_6.n_21-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_counts_pattern_7.n_21-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_counts_pattern_0.n_6260-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_counts_pattern_1.n_2209-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_counts_pattern_2.n_1058-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_counts_pattern_3.n_703-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EDN_ChIP_MAZ_HepG2_ENCSR364YEH_counts_pattern_0.n_6439-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EDN_ChIP_MAZ_HepG2_ENCSR364YEH_counts_pattern_1.n_1375-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EDN_ChIP_MAZ_HepG2_ENCSR364YEH_counts_pattern_2.n_1125-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_counts_pattern_0.n_8593-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_counts_pattern_1.n_4059-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_counts_pattern_2.n_2998-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_counts_pattern_3.n_550-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_counts_pattern_4.n_297-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_counts_pattern_5.n_110-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_counts_pattern_6.n_91-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_counts_pattern_7.n_29-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_counts_pattern_8.n_27-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_counts_pattern_9.n_21-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_counts_pattern_0.n_11317-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_counts_pattern_10.n_32-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_counts_pattern_1.n_8805-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_counts_pattern_2.n_3791-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_counts_pattern_3.n_2010-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_counts_pattern_4.n_268-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_counts_pattern_5.n_72-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_counts_pattern_6.n_57-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_counts_pattern_7.n_52-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_counts_pattern_8.n_51-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_counts_pattern_9.n_48-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_counts_pattern_0.n_8211-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_counts_pattern_10.n_39-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_counts_pattern_1.n_7319-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_counts_pattern_2.n_1522-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_counts_pattern_3.n_1055-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_counts_pattern_4.n_452-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_counts_pattern_5.n_423-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_counts_pattern_6.n_62-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_counts_pattern_7.n_60-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_counts_pattern_8.n_47-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_counts_pattern_9.n_41-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR288IJC_ChIP_MAZ_MCF-7_ENCSR249QEG_counts_pattern_0.n_6812-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR288IJC_ChIP_MAZ_MCF-7_ENCSR249QEG_counts_pattern_1.n_972-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR288IJC_ChIP_MAZ_MCF-7_ENCSR249QEG_counts_pattern_2.n_882-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR288IJC_ChIP_MAZ_MCF-7_ENCSR249QEG_counts_pattern_3.n_337-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR288IJC_ChIP_MAZ_MCF-7_ENCSR249QEG_counts_pattern_4.n_59-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR288IJC_ChIP_MAZ_MCF-7_ENCSR249QEG_counts_pattern_5.n_33-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR290SSQ_ChIP_MAZ_HEK293_ENCSR821GPM_counts_pattern_0.n_16431-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR290SSQ_ChIP_MAZ_HEK293_ENCSR821GPM_counts_pattern_1.n_2356-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR290SSQ_ChIP_MAZ_HEK293_ENCSR821GPM_counts_pattern_2.n_1314-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR290SSQ_ChIP_MAZ_HEK293_ENCSR821GPM_counts_pattern_3.n_1190-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR290SSQ_ChIP_MAZ_HEK293_ENCSR821GPM_counts_pattern_4.n_823-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR290SSQ_ChIP_MAZ_HEK293_ENCSR821GPM_counts_pattern_5.n_413-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR636YLV_ChIP_MAZ_A549_ENCSR118TTR_counts_pattern_0.n_2412-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR636YLV_ChIP_MAZ_A549_ENCSR118TTR_counts_pattern_1.n_239-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR636YLV_ChIP_MAZ_A549_ENCSR118TTR_counts_pattern_2.n_149-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR636YLV_ChIP_MAZ_A549_ENCSR118TTR_counts_pattern_3.n_71-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_counts_pattern_0.n_7931-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_counts_pattern_1.n_2681-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_counts_pattern_2.n_1477-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_counts_pattern_3.n_647-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_counts_pattern_4.n_580-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_counts_pattern_5.n_440-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_counts_pattern_6.n_342-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_counts_pattern_7.n_138-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_counts_pattern_8.n_32-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_0.n_6611-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_10.n_290-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_11.n_275-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_12.n_254-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_13.n_153-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_14.n_146-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_15.n_89-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_16.n_87-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_17.n_35-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_18.n_35-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_19.n_22-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_1.n_3208-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_20.n_21-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_2.n_1672-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_3.n_1529-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_4.n_1286-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_5.n_1029-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_6.n_869-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_7.n_378-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_8.n_336-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_9.n_296-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_0.n_12866-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_10.n_32-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_11.n_32-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_1.n_1047-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_2.n_628-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_3.n_292-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_4.n_232-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_5.n_204-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_6.n_116-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_7.n_37-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_8.n_35-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_9.n_33-vs-MAZ-202.alignment counts-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/Hughes_GR_models_MAZ_counts-pos.pattern_0.n_6935-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/Hughes_GR_models_MAZ_counts-pos.pattern_1.n_767-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/Hughes_GR_models_MAZ_counts-pos.pattern_2.n_310-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/Hughes_GR_models_MAZ_counts-pos.pattern_3.n_257-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/Hughes_GR_models_MAZ_counts-pos.pattern_4.n_189-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/Hughes_GR_models_MAZ_counts-pos.pattern_5.n_129-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/Hughes_GR_models_MAZ_counts-pos.pattern_6.n_61-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/Hughes_GR_models_MAZ_counts-pos.pattern_7.n_33-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_counts_pattern_0.n_9251-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_counts_pattern_1.n_2939-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_counts_pattern_2.n_719-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_counts_pattern_3.n_320-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_counts_pattern_4.n_31-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_counts_pattern_5.n_24-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_counts_pattern_6.n_21-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_counts_pattern_7.n_21-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_counts_pattern_0.n_6260-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_counts_pattern_1.n_2209-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_counts_pattern_2.n_1058-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_counts_pattern_3.n_703-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EDN_ChIP_MAZ_HepG2_ENCSR364YEH_counts_pattern_0.n_6439-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EDN_ChIP_MAZ_HepG2_ENCSR364YEH_counts_pattern_1.n_1375-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EDN_ChIP_MAZ_HepG2_ENCSR364YEH_counts_pattern_2.n_1125-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_counts_pattern_0.n_8593-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_counts_pattern_1.n_4059-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_counts_pattern_2.n_2998-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_counts_pattern_3.n_550-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_counts_pattern_4.n_297-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_counts_pattern_5.n_110-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_counts_pattern_6.n_91-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_counts_pattern_7.n_29-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_counts_pattern_8.n_27-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_counts_pattern_9.n_21-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_counts_pattern_0.n_11317-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_counts_pattern_10.n_32-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_counts_pattern_1.n_8805-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_counts_pattern_2.n_3791-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_counts_pattern_3.n_2010-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_counts_pattern_4.n_268-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_counts_pattern_5.n_72-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_counts_pattern_6.n_57-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_counts_pattern_7.n_52-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_counts_pattern_8.n_51-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_counts_pattern_9.n_48-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_counts_pattern_0.n_8211-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_counts_pattern_10.n_39-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_counts_pattern_1.n_7319-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_counts_pattern_2.n_1522-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_counts_pattern_3.n_1055-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_counts_pattern_4.n_452-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_counts_pattern_5.n_423-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_counts_pattern_6.n_62-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_counts_pattern_7.n_60-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_counts_pattern_8.n_47-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_counts_pattern_9.n_41-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR288IJC_ChIP_MAZ_MCF-7_ENCSR249QEG_counts_pattern_0.n_6812-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR288IJC_ChIP_MAZ_MCF-7_ENCSR249QEG_counts_pattern_1.n_972-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR288IJC_ChIP_MAZ_MCF-7_ENCSR249QEG_counts_pattern_2.n_882-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR288IJC_ChIP_MAZ_MCF-7_ENCSR249QEG_counts_pattern_3.n_337-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR288IJC_ChIP_MAZ_MCF-7_ENCSR249QEG_counts_pattern_4.n_59-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR288IJC_ChIP_MAZ_MCF-7_ENCSR249QEG_counts_pattern_5.n_33-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR290SSQ_ChIP_MAZ_HEK293_ENCSR821GPM_counts_pattern_0.n_16431-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR290SSQ_ChIP_MAZ_HEK293_ENCSR821GPM_counts_pattern_1.n_2356-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR290SSQ_ChIP_MAZ_HEK293_ENCSR821GPM_counts_pattern_2.n_1314-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR290SSQ_ChIP_MAZ_HEK293_ENCSR821GPM_counts_pattern_3.n_1190-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR290SSQ_ChIP_MAZ_HEK293_ENCSR821GPM_counts_pattern_4.n_823-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR290SSQ_ChIP_MAZ_HEK293_ENCSR821GPM_counts_pattern_5.n_413-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR636YLV_ChIP_MAZ_A549_ENCSR118TTR_counts_pattern_0.n_2412-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR636YLV_ChIP_MAZ_A549_ENCSR118TTR_counts_pattern_1.n_239-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR636YLV_ChIP_MAZ_A549_ENCSR118TTR_counts_pattern_2.n_149-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR636YLV_ChIP_MAZ_A549_ENCSR118TTR_counts_pattern_3.n_71-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_counts_pattern_0.n_7931-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_counts_pattern_1.n_2681-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_counts_pattern_2.n_1477-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_counts_pattern_3.n_647-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_counts_pattern_4.n_580-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_counts_pattern_5.n_440-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_counts_pattern_6.n_342-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_counts_pattern_7.n_138-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_counts_pattern_8.n_32-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_0.n_6611-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_10.n_290-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_11.n_275-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_12.n_254-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_13.n_153-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_14.n_146-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_15.n_89-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_16.n_87-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_17.n_35-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_18.n_35-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_19.n_22-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_1.n_3208-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_20.n_21-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_2.n_1672-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_3.n_1529-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_4.n_1286-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_5.n_1029-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_6.n_869-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_7.n_378-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_8.n_336-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_9.n_296-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_0.n_12866-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_10.n_32-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_11.n_32-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_1.n_1047-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_2.n_628-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_3.n_292-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_4.n_232-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_5.n_204-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_6.n_116-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_7.n_37-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_8.n_35-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_9.n_33-vs-MAZ-212.alignment counts-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/Hughes_GR_models_MAZ_counts-pos.pattern_0.n_6935-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/Hughes_GR_models_MAZ_counts-pos.pattern_1.n_767-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/Hughes_GR_models_MAZ_counts-pos.pattern_2.n_310-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/Hughes_GR_models_MAZ_counts-pos.pattern_3.n_257-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/Hughes_GR_models_MAZ_counts-pos.pattern_4.n_189-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/Hughes_GR_models_MAZ_counts-pos.pattern_5.n_129-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/Hughes_GR_models_MAZ_counts-pos.pattern_6.n_61-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/Hughes_GR_models_MAZ_counts-pos.pattern_7.n_33-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_counts_pattern_0.n_9251-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_counts_pattern_1.n_2939-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_counts_pattern_2.n_719-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_counts_pattern_3.n_320-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_counts_pattern_4.n_31-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_counts_pattern_5.n_24-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_counts_pattern_6.n_21-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_counts_pattern_7.n_21-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_counts_pattern_0.n_6260-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_counts_pattern_1.n_2209-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_counts_pattern_2.n_1058-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_counts_pattern_3.n_703-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR000EDN_ChIP_MAZ_HepG2_ENCSR364YEH_counts_pattern_0.n_6439-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR000EDN_ChIP_MAZ_HepG2_ENCSR364YEH_counts_pattern_1.n_1375-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR000EDN_ChIP_MAZ_HepG2_ENCSR364YEH_counts_pattern_2.n_1125-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_counts_pattern_0.n_8593-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_counts_pattern_1.n_4059-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_counts_pattern_2.n_2998-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_counts_pattern_3.n_550-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_counts_pattern_4.n_297-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_counts_pattern_5.n_110-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_counts_pattern_6.n_91-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_counts_pattern_7.n_29-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_counts_pattern_8.n_27-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_counts_pattern_9.n_21-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_counts_pattern_0.n_11317-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_counts_pattern_10.n_32-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_counts_pattern_1.n_8805-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_counts_pattern_2.n_3791-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_counts_pattern_3.n_2010-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_counts_pattern_4.n_268-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_counts_pattern_5.n_72-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_counts_pattern_6.n_57-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_counts_pattern_7.n_52-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_counts_pattern_8.n_51-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_counts_pattern_9.n_48-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_counts_pattern_0.n_8211-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_counts_pattern_10.n_39-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_counts_pattern_1.n_7319-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_counts_pattern_2.n_1522-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_counts_pattern_3.n_1055-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_counts_pattern_4.n_452-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_counts_pattern_5.n_423-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_counts_pattern_6.n_62-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_counts_pattern_7.n_60-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_counts_pattern_8.n_47-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_counts_pattern_9.n_41-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR288IJC_ChIP_MAZ_MCF-7_ENCSR249QEG_counts_pattern_0.n_6812-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR288IJC_ChIP_MAZ_MCF-7_ENCSR249QEG_counts_pattern_1.n_972-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR288IJC_ChIP_MAZ_MCF-7_ENCSR249QEG_counts_pattern_2.n_882-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR288IJC_ChIP_MAZ_MCF-7_ENCSR249QEG_counts_pattern_3.n_337-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR288IJC_ChIP_MAZ_MCF-7_ENCSR249QEG_counts_pattern_4.n_59-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR288IJC_ChIP_MAZ_MCF-7_ENCSR249QEG_counts_pattern_5.n_33-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR290SSQ_ChIP_MAZ_HEK293_ENCSR821GPM_counts_pattern_0.n_16431-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR290SSQ_ChIP_MAZ_HEK293_ENCSR821GPM_counts_pattern_1.n_2356-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR290SSQ_ChIP_MAZ_HEK293_ENCSR821GPM_counts_pattern_2.n_1314-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR290SSQ_ChIP_MAZ_HEK293_ENCSR821GPM_counts_pattern_3.n_1190-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR290SSQ_ChIP_MAZ_HEK293_ENCSR821GPM_counts_pattern_4.n_823-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR290SSQ_ChIP_MAZ_HEK293_ENCSR821GPM_counts_pattern_5.n_413-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR636YLV_ChIP_MAZ_A549_ENCSR118TTR_counts_pattern_0.n_2412-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR636YLV_ChIP_MAZ_A549_ENCSR118TTR_counts_pattern_1.n_239-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR636YLV_ChIP_MAZ_A549_ENCSR118TTR_counts_pattern_2.n_149-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR636YLV_ChIP_MAZ_A549_ENCSR118TTR_counts_pattern_3.n_71-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_counts_pattern_0.n_7931-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_counts_pattern_1.n_2681-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_counts_pattern_2.n_1477-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_counts_pattern_3.n_647-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_counts_pattern_4.n_580-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_counts_pattern_5.n_440-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_counts_pattern_6.n_342-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_counts_pattern_7.n_138-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_counts_pattern_8.n_32-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_0.n_6611-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_10.n_290-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_11.n_275-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_12.n_254-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_13.n_153-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_14.n_146-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_15.n_89-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_16.n_87-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_17.n_35-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_18.n_35-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_19.n_22-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_1.n_3208-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_20.n_21-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_2.n_1672-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_3.n_1529-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_4.n_1286-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_5.n_1029-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_6.n_869-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_7.n_378-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_8.n_336-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_counts_pattern_9.n_296-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_0.n_12866-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_10.n_32-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_11.n_32-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_1.n_1047-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_2.n_628-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_3.n_292-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_4.n_232-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_5.n_204-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_6.n_116-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_7.n_37-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_8.n_35-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_counts_pattern_9.n_33-vs-MAZ-216.alignment counts-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MTF1-201/pos_patterns.ENCSR194NVP_ChIP_MTF1_HepG2_ENCSR754RTF_counts_pattern_0.n_1360-vs-MTF1-201.alignment counts-znf_b1h_alignment/MTF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MTF1-201/pos_patterns.ENCSR194NVP_ChIP_MTF1_HepG2_ENCSR754RTF_counts_pattern_1.n_776-vs-MTF1-201.alignment counts-znf_b1h_alignment/MTF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MTF1-201/pos_patterns.ENCSR194NVP_ChIP_MTF1_HepG2_ENCSR754RTF_counts_pattern_2.n_306-vs-MTF1-201.alignment counts-znf_b1h_alignment/MTF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MTF1-201/pos_patterns.ENCSR194NVP_ChIP_MTF1_HepG2_ENCSR754RTF_counts_pattern_3.n_245-vs-MTF1-201.alignment counts-znf_b1h_alignment/MTF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MTF1-201/pos_patterns.ENCSR194NVP_ChIP_MTF1_HepG2_ENCSR754RTF_counts_pattern_4.n_234-vs-MTF1-201.alignment counts-znf_b1h_alignment/MTF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MTF1-201/pos_patterns.ENCSR194NVP_ChIP_MTF1_HepG2_ENCSR754RTF_counts_pattern_5.n_156-vs-MTF1-201.alignment counts-znf_b1h_alignment/MTF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MTF1-201/pos_patterns.ENCSR194NVP_ChIP_MTF1_HepG2_ENCSR754RTF_counts_pattern_6.n_95-vs-MTF1-201.alignment counts-znf_b1h_alignment/MTF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MTF1-201/pos_patterns.ENCSR194NVP_ChIP_MTF1_HepG2_ENCSR754RTF_counts_pattern_7.n_45-vs-MTF1-201.alignment counts-znf_b1h_alignment/MTF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MTF1-201/pos_patterns.ENCSR194NVP_ChIP_MTF1_HepG2_ENCSR754RTF_counts_pattern_8.n_21-vs-MTF1-201.alignment counts-znf_b1h_alignment/MTF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MTF1-201/pos_patterns.ENCSR849LXI_ChIP_MTF1_K562_ENCSR694JJN_counts_pattern_0.n_794-vs-MTF1-201.alignment counts-znf_b1h_alignment/MTF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MTF1-201/pos_patterns.ENCSR849LXI_ChIP_MTF1_K562_ENCSR694JJN_counts_pattern_1.n_367-vs-MTF1-201.alignment counts-znf_b1h_alignment/MTF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MTF1-201/pos_patterns.ENCSR849LXI_ChIP_MTF1_K562_ENCSR694JJN_counts_pattern_2.n_113-vs-MTF1-201.alignment counts-znf_b1h_alignment/MTF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MTF1-201/pos_patterns.ENCSR849LXI_ChIP_MTF1_K562_ENCSR694JJN_counts_pattern_3.n_52-vs-MTF1-201.alignment counts-znf_b1h_alignment/MTF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MTF1-201/pos_patterns.ENCSR849LXI_ChIP_MTF1_K562_ENCSR694JJN_counts_pattern_4.n_47-vs-MTF1-201.alignment counts-znf_b1h_alignment/MTF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MTF1-201/pos_patterns.ENCSR849LXI_ChIP_MTF1_K562_ENCSR694JJN_counts_pattern_5.n_44-vs-MTF1-201.alignment counts-znf_b1h_alignment/MTF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MTF1-201/pos_patterns.ENCSR849LXI_ChIP_MTF1_K562_ENCSR694JJN_counts_pattern_6.n_22-vs-MTF1-201.alignment counts-znf_b1h_alignment/MTF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MTF1-201/pos_patterns.ENCSR849LXI_ChIP_MTF1_K562_ENCSR694JJN_counts_pattern_7.n_21-vs-MTF1-201.alignment counts-znf_b1h_alignment/MTF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/Hughes_GR_models_MYNN_counts-pos.pattern_0.n_1851-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/Hughes_GR_models_MYNN_counts-pos.pattern_1.n_572-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/Hughes_GR_models_MYNN_counts-pos.pattern_2.n_163-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/Hughes_GR_models_MYNN_counts-pos.pattern_3.n_59-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/neg_patterns.ENCSR707BNG_ChIP_MYNN_HEK293_ENCSR948VXG_counts_pattern_0.n_21-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/neg_patterns.ENCSR737LTZ_ChIP_MYNN_K562_ENCSR073PHB_counts_pattern_0.n_39-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/neg_patterns.ENCSR737LTZ_ChIP_MYNN_K562_ENCSR073PHB_counts_pattern_1.n_37-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/neg_patterns.ENCSR737LTZ_ChIP_MYNN_K562_ENCSR073PHB_counts_pattern_2.n_29-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR307YJU_ChIP_MYNN_K562_ENCSR558JOE_counts_pattern_0.n_147-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR307YJU_ChIP_MYNN_K562_ENCSR558JOE_counts_pattern_1.n_89-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR307YJU_ChIP_MYNN_K562_ENCSR558JOE_counts_pattern_2.n_65-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR307YJU_ChIP_MYNN_K562_ENCSR558JOE_counts_pattern_3.n_64-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR307YJU_ChIP_MYNN_K562_ENCSR558JOE_counts_pattern_4.n_42-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR307YJU_ChIP_MYNN_K562_ENCSR558JOE_counts_pattern_5.n_42-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR307YJU_ChIP_MYNN_K562_ENCSR558JOE_counts_pattern_6.n_35-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR307YJU_ChIP_MYNN_K562_ENCSR558JOE_counts_pattern_7.n_35-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR307YJU_ChIP_MYNN_K562_ENCSR558JOE_counts_pattern_8.n_21-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR307YJU_ChIP_MYNN_K562_ENCSR558JOE_counts_pattern_9.n_21-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR398TMP_ChIP_MYNN_HepG2_ENCSR693LFO_counts_pattern_0.n_955-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR398TMP_ChIP_MYNN_HepG2_ENCSR693LFO_counts_pattern_10.n_155-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR398TMP_ChIP_MYNN_HepG2_ENCSR693LFO_counts_pattern_11.n_155-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR398TMP_ChIP_MYNN_HepG2_ENCSR693LFO_counts_pattern_12.n_154-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR398TMP_ChIP_MYNN_HepG2_ENCSR693LFO_counts_pattern_13.n_96-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR398TMP_ChIP_MYNN_HepG2_ENCSR693LFO_counts_pattern_14.n_50-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR398TMP_ChIP_MYNN_HepG2_ENCSR693LFO_counts_pattern_15.n_41-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR398TMP_ChIP_MYNN_HepG2_ENCSR693LFO_counts_pattern_16.n_35-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR398TMP_ChIP_MYNN_HepG2_ENCSR693LFO_counts_pattern_1.n_892-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR398TMP_ChIP_MYNN_HepG2_ENCSR693LFO_counts_pattern_2.n_473-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR398TMP_ChIP_MYNN_HepG2_ENCSR693LFO_counts_pattern_3.n_429-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR398TMP_ChIP_MYNN_HepG2_ENCSR693LFO_counts_pattern_4.n_410-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR398TMP_ChIP_MYNN_HepG2_ENCSR693LFO_counts_pattern_5.n_402-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR398TMP_ChIP_MYNN_HepG2_ENCSR693LFO_counts_pattern_6.n_367-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR398TMP_ChIP_MYNN_HepG2_ENCSR693LFO_counts_pattern_7.n_282-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR398TMP_ChIP_MYNN_HepG2_ENCSR693LFO_counts_pattern_8.n_231-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR398TMP_ChIP_MYNN_HepG2_ENCSR693LFO_counts_pattern_9.n_182-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR707BNG_ChIP_MYNN_HEK293_ENCSR948VXG_counts_pattern_0.n_1949-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR707BNG_ChIP_MYNN_HEK293_ENCSR948VXG_counts_pattern_1.n_1367-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR707BNG_ChIP_MYNN_HEK293_ENCSR948VXG_counts_pattern_2.n_929-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR707BNG_ChIP_MYNN_HEK293_ENCSR948VXG_counts_pattern_3.n_387-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR707BNG_ChIP_MYNN_HEK293_ENCSR948VXG_counts_pattern_4.n_234-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR707BNG_ChIP_MYNN_HEK293_ENCSR948VXG_counts_pattern_5.n_97-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR707BNG_ChIP_MYNN_HEK293_ENCSR948VXG_counts_pattern_6.n_59-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR707BNG_ChIP_MYNN_HEK293_ENCSR948VXG_counts_pattern_7.n_29-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR737LTZ_ChIP_MYNN_K562_ENCSR073PHB_counts_pattern_0.n_4921-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR737LTZ_ChIP_MYNN_K562_ENCSR073PHB_counts_pattern_1.n_1918-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR737LTZ_ChIP_MYNN_K562_ENCSR073PHB_counts_pattern_2.n_1427-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR737LTZ_ChIP_MYNN_K562_ENCSR073PHB_counts_pattern_3.n_853-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR737LTZ_ChIP_MYNN_K562_ENCSR073PHB_counts_pattern_4.n_590-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR737LTZ_ChIP_MYNN_K562_ENCSR073PHB_counts_pattern_5.n_452-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR737LTZ_ChIP_MYNN_K562_ENCSR073PHB_counts_pattern_6.n_211-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR737LTZ_ChIP_MYNN_K562_ENCSR073PHB_counts_pattern_7.n_137-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR992KLV_ChIP_MYNN_K562_ENCSR395MQN_counts_pattern_0.n_310-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR992KLV_ChIP_MYNN_K562_ENCSR395MQN_counts_pattern_1.n_156-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR992KLV_ChIP_MYNN_K562_ENCSR395MQN_counts_pattern_2.n_61-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-201/pos_patterns.ENCSR992KLV_ChIP_MYNN_K562_ENCSR395MQN_counts_pattern_3.n_29-vs-MYNN-201.alignment counts-znf_b1h_alignment/MYNN-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/Hughes_GR_models_MYNN_counts-pos.pattern_0.n_1851-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/Hughes_GR_models_MYNN_counts-pos.pattern_1.n_572-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/Hughes_GR_models_MYNN_counts-pos.pattern_2.n_163-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/Hughes_GR_models_MYNN_counts-pos.pattern_3.n_59-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/neg_patterns.ENCSR707BNG_ChIP_MYNN_HEK293_ENCSR948VXG_counts_pattern_0.n_21-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/neg_patterns.ENCSR737LTZ_ChIP_MYNN_K562_ENCSR073PHB_counts_pattern_0.n_39-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/neg_patterns.ENCSR737LTZ_ChIP_MYNN_K562_ENCSR073PHB_counts_pattern_1.n_37-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/neg_patterns.ENCSR737LTZ_ChIP_MYNN_K562_ENCSR073PHB_counts_pattern_2.n_29-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR307YJU_ChIP_MYNN_K562_ENCSR558JOE_counts_pattern_0.n_147-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR307YJU_ChIP_MYNN_K562_ENCSR558JOE_counts_pattern_1.n_89-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR307YJU_ChIP_MYNN_K562_ENCSR558JOE_counts_pattern_2.n_65-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR307YJU_ChIP_MYNN_K562_ENCSR558JOE_counts_pattern_3.n_64-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR307YJU_ChIP_MYNN_K562_ENCSR558JOE_counts_pattern_4.n_42-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR307YJU_ChIP_MYNN_K562_ENCSR558JOE_counts_pattern_5.n_42-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR307YJU_ChIP_MYNN_K562_ENCSR558JOE_counts_pattern_6.n_35-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR307YJU_ChIP_MYNN_K562_ENCSR558JOE_counts_pattern_7.n_35-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR307YJU_ChIP_MYNN_K562_ENCSR558JOE_counts_pattern_8.n_21-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR307YJU_ChIP_MYNN_K562_ENCSR558JOE_counts_pattern_9.n_21-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR398TMP_ChIP_MYNN_HepG2_ENCSR693LFO_counts_pattern_0.n_955-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR398TMP_ChIP_MYNN_HepG2_ENCSR693LFO_counts_pattern_10.n_155-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR398TMP_ChIP_MYNN_HepG2_ENCSR693LFO_counts_pattern_11.n_155-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR398TMP_ChIP_MYNN_HepG2_ENCSR693LFO_counts_pattern_12.n_154-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR398TMP_ChIP_MYNN_HepG2_ENCSR693LFO_counts_pattern_13.n_96-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR398TMP_ChIP_MYNN_HepG2_ENCSR693LFO_counts_pattern_14.n_50-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR398TMP_ChIP_MYNN_HepG2_ENCSR693LFO_counts_pattern_15.n_41-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR398TMP_ChIP_MYNN_HepG2_ENCSR693LFO_counts_pattern_16.n_35-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR398TMP_ChIP_MYNN_HepG2_ENCSR693LFO_counts_pattern_1.n_892-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR398TMP_ChIP_MYNN_HepG2_ENCSR693LFO_counts_pattern_2.n_473-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR398TMP_ChIP_MYNN_HepG2_ENCSR693LFO_counts_pattern_3.n_429-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR398TMP_ChIP_MYNN_HepG2_ENCSR693LFO_counts_pattern_4.n_410-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR398TMP_ChIP_MYNN_HepG2_ENCSR693LFO_counts_pattern_5.n_402-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR398TMP_ChIP_MYNN_HepG2_ENCSR693LFO_counts_pattern_6.n_367-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR398TMP_ChIP_MYNN_HepG2_ENCSR693LFO_counts_pattern_7.n_282-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR398TMP_ChIP_MYNN_HepG2_ENCSR693LFO_counts_pattern_8.n_231-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR398TMP_ChIP_MYNN_HepG2_ENCSR693LFO_counts_pattern_9.n_182-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR707BNG_ChIP_MYNN_HEK293_ENCSR948VXG_counts_pattern_0.n_1949-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR707BNG_ChIP_MYNN_HEK293_ENCSR948VXG_counts_pattern_1.n_1367-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR707BNG_ChIP_MYNN_HEK293_ENCSR948VXG_counts_pattern_2.n_929-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR707BNG_ChIP_MYNN_HEK293_ENCSR948VXG_counts_pattern_3.n_387-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR707BNG_ChIP_MYNN_HEK293_ENCSR948VXG_counts_pattern_4.n_234-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR707BNG_ChIP_MYNN_HEK293_ENCSR948VXG_counts_pattern_5.n_97-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR707BNG_ChIP_MYNN_HEK293_ENCSR948VXG_counts_pattern_6.n_59-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR707BNG_ChIP_MYNN_HEK293_ENCSR948VXG_counts_pattern_7.n_29-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR737LTZ_ChIP_MYNN_K562_ENCSR073PHB_counts_pattern_0.n_4921-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR737LTZ_ChIP_MYNN_K562_ENCSR073PHB_counts_pattern_1.n_1918-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR737LTZ_ChIP_MYNN_K562_ENCSR073PHB_counts_pattern_2.n_1427-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR737LTZ_ChIP_MYNN_K562_ENCSR073PHB_counts_pattern_3.n_853-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR737LTZ_ChIP_MYNN_K562_ENCSR073PHB_counts_pattern_4.n_590-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR737LTZ_ChIP_MYNN_K562_ENCSR073PHB_counts_pattern_5.n_452-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR737LTZ_ChIP_MYNN_K562_ENCSR073PHB_counts_pattern_6.n_211-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR737LTZ_ChIP_MYNN_K562_ENCSR073PHB_counts_pattern_7.n_137-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR992KLV_ChIP_MYNN_K562_ENCSR395MQN_counts_pattern_0.n_310-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR992KLV_ChIP_MYNN_K562_ENCSR395MQN_counts_pattern_1.n_156-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR992KLV_ChIP_MYNN_K562_ENCSR395MQN_counts_pattern_2.n_61-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MYNN-204/pos_patterns.ENCSR992KLV_ChIP_MYNN_K562_ENCSR395MQN_counts_pattern_3.n_29-vs-MYNN-204.alignment counts-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MZF1-201/Hughes_GR_models_MZF1_counts-pos.pattern_0.n_93-vs-MZF1-201.alignment counts-znf_b1h_alignment/MZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MZF1-201/Hughes_GR_models_MZF1_counts-pos.pattern_10.n_45-vs-MZF1-201.alignment counts-znf_b1h_alignment/MZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MZF1-201/Hughes_GR_models_MZF1_counts-pos.pattern_11.n_40-vs-MZF1-201.alignment counts-znf_b1h_alignment/MZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MZF1-201/Hughes_GR_models_MZF1_counts-pos.pattern_12.n_39-vs-MZF1-201.alignment counts-znf_b1h_alignment/MZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MZF1-201/Hughes_GR_models_MZF1_counts-pos.pattern_13.n_38-vs-MZF1-201.alignment counts-znf_b1h_alignment/MZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MZF1-201/Hughes_GR_models_MZF1_counts-pos.pattern_14.n_35-vs-MZF1-201.alignment counts-znf_b1h_alignment/MZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MZF1-201/Hughes_GR_models_MZF1_counts-pos.pattern_15.n_32-vs-MZF1-201.alignment counts-znf_b1h_alignment/MZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MZF1-201/Hughes_GR_models_MZF1_counts-pos.pattern_16.n_26-vs-MZF1-201.alignment counts-znf_b1h_alignment/MZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MZF1-201/Hughes_GR_models_MZF1_counts-pos.pattern_1.n_91-vs-MZF1-201.alignment counts-znf_b1h_alignment/MZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MZF1-201/Hughes_GR_models_MZF1_counts-pos.pattern_2.n_82-vs-MZF1-201.alignment counts-znf_b1h_alignment/MZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MZF1-201/Hughes_GR_models_MZF1_counts-pos.pattern_3.n_76-vs-MZF1-201.alignment counts-znf_b1h_alignment/MZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MZF1-201/Hughes_GR_models_MZF1_counts-pos.pattern_4.n_58-vs-MZF1-201.alignment counts-znf_b1h_alignment/MZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MZF1-201/Hughes_GR_models_MZF1_counts-pos.pattern_5.n_57-vs-MZF1-201.alignment counts-znf_b1h_alignment/MZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MZF1-201/Hughes_GR_models_MZF1_counts-pos.pattern_6.n_56-vs-MZF1-201.alignment counts-znf_b1h_alignment/MZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MZF1-201/Hughes_GR_models_MZF1_counts-pos.pattern_7.n_52-vs-MZF1-201.alignment counts-znf_b1h_alignment/MZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MZF1-201/Hughes_GR_models_MZF1_counts-pos.pattern_8.n_46-vs-MZF1-201.alignment counts-znf_b1h_alignment/MZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MZF1-201/Hughes_GR_models_MZF1_counts-pos.pattern_9.n_45-vs-MZF1-201.alignment counts-znf_b1h_alignment/MZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MZF1-201/Hughes_NB_models_MZF1_counts-pos.pattern_0.n_4472-vs-MZF1-201.alignment counts-znf_b1h_alignment/MZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MZF1-201/Hughes_NB_models_MZF1_counts-pos.pattern_1.n_388-vs-MZF1-201.alignment counts-znf_b1h_alignment/MZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MZF1-201/Hughes_NB_models_MZF1_counts-pos.pattern_2.n_23-vs-MZF1-201.alignment counts-znf_b1h_alignment/MZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MZF1-201/pos_patterns.ENCSR298QUH_ChIP_MZF1_HEK293_ENCSR570SUC_counts_pattern_0.n_7571-vs-MZF1-201.alignment counts-znf_b1h_alignment/MZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MZF1-201/pos_patterns.ENCSR298QUH_ChIP_MZF1_HEK293_ENCSR570SUC_counts_pattern_1.n_550-vs-MZF1-201.alignment counts-znf_b1h_alignment/MZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MZF1-201/pos_patterns.ENCSR298QUH_ChIP_MZF1_HEK293_ENCSR570SUC_counts_pattern_2.n_302-vs-MZF1-201.alignment counts-znf_b1h_alignment/MZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MZF1-201/pos_patterns.ENCSR298QUH_ChIP_MZF1_HEK293_ENCSR570SUC_counts_pattern_3.n_300-vs-MZF1-201.alignment counts-znf_b1h_alignment/MZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MZF1-201/pos_patterns.ENCSR298QUH_ChIP_MZF1_HEK293_ENCSR570SUC_counts_pattern_4.n_145-vs-MZF1-201.alignment counts-znf_b1h_alignment/MZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MZF1-201/pos_patterns.ENCSR298QUH_ChIP_MZF1_HEK293_ENCSR570SUC_counts_pattern_5.n_113-vs-MZF1-201.alignment counts-znf_b1h_alignment/MZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MZF1-201/pos_patterns.ENCSR298QUH_ChIP_MZF1_HEK293_ENCSR570SUC_counts_pattern_6.n_96-vs-MZF1-201.alignment counts-znf_b1h_alignment/MZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MZF1-201/pos_patterns.ENCSR298QUH_ChIP_MZF1_HEK293_ENCSR570SUC_counts_pattern_7.n_91-vs-MZF1-201.alignment counts-znf_b1h_alignment/MZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MZF1-201/pos_patterns.ENCSR384YOP_ChIP_MZF1_HepG2_ENCSR888HRF_counts_pattern_0.n_820-vs-MZF1-201.alignment counts-znf_b1h_alignment/MZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MZF1-201/pos_patterns.ENCSR384YOP_ChIP_MZF1_HepG2_ENCSR888HRF_counts_pattern_1.n_742-vs-MZF1-201.alignment counts-znf_b1h_alignment/MZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MZF1-201/pos_patterns.ENCSR384YOP_ChIP_MZF1_HepG2_ENCSR888HRF_counts_pattern_2.n_737-vs-MZF1-201.alignment counts-znf_b1h_alignment/MZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MZF1-201/pos_patterns.ENCSR384YOP_ChIP_MZF1_HepG2_ENCSR888HRF_counts_pattern_3.n_670-vs-MZF1-201.alignment counts-znf_b1h_alignment/MZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/MZF1-201/pos_patterns.ENCSR384YOP_ChIP_MZF1_HepG2_ENCSR888HRF_counts_pattern_4.n_28-vs-MZF1-201.alignment counts-znf_b1h_alignment/MZF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-201/Hughes_GR_models_OSR2_counts-pos.pattern_0.n_5652-vs-OSR2-201.alignment counts-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-201/Hughes_GR_models_OSR2_counts-pos.pattern_10.n_48-vs-OSR2-201.alignment counts-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-201/Hughes_GR_models_OSR2_counts-pos.pattern_11.n_22-vs-OSR2-201.alignment counts-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-201/Hughes_GR_models_OSR2_counts-pos.pattern_1.n_1703-vs-OSR2-201.alignment counts-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-201/Hughes_GR_models_OSR2_counts-pos.pattern_2.n_626-vs-OSR2-201.alignment counts-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-201/Hughes_GR_models_OSR2_counts-pos.pattern_3.n_579-vs-OSR2-201.alignment counts-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-201/Hughes_GR_models_OSR2_counts-pos.pattern_4.n_306-vs-OSR2-201.alignment counts-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-201/Hughes_GR_models_OSR2_counts-pos.pattern_5.n_229-vs-OSR2-201.alignment counts-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-201/Hughes_GR_models_OSR2_counts-pos.pattern_6.n_168-vs-OSR2-201.alignment counts-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-201/Hughes_GR_models_OSR2_counts-pos.pattern_7.n_137-vs-OSR2-201.alignment counts-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-201/Hughes_GR_models_OSR2_counts-pos.pattern_8.n_80-vs-OSR2-201.alignment counts-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-201/Hughes_GR_models_OSR2_counts-pos.pattern_9.n_49-vs-OSR2-201.alignment counts-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-201/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_counts_pattern_0.n_6981-vs-OSR2-201.alignment counts-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-201/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_counts_pattern_10.n_89-vs-OSR2-201.alignment counts-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-201/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_counts_pattern_11.n_45-vs-OSR2-201.alignment counts-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-201/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_counts_pattern_12.n_23-vs-OSR2-201.alignment counts-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-201/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_counts_pattern_13.n_22-vs-OSR2-201.alignment counts-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-201/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_counts_pattern_1.n_4280-vs-OSR2-201.alignment counts-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-201/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_counts_pattern_2.n_2799-vs-OSR2-201.alignment counts-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-201/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_counts_pattern_3.n_2380-vs-OSR2-201.alignment counts-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-201/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_counts_pattern_4.n_2192-vs-OSR2-201.alignment counts-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-201/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_counts_pattern_5.n_2109-vs-OSR2-201.alignment counts-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-201/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_counts_pattern_6.n_1833-vs-OSR2-201.alignment counts-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-201/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_counts_pattern_7.n_627-vs-OSR2-201.alignment counts-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-201/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_counts_pattern_8.n_234-vs-OSR2-201.alignment counts-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-201/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_counts_pattern_9.n_119-vs-OSR2-201.alignment counts-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-202/Hughes_GR_models_OSR2_counts-pos.pattern_0.n_5652-vs-OSR2-202.alignment counts-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-202/Hughes_GR_models_OSR2_counts-pos.pattern_10.n_48-vs-OSR2-202.alignment counts-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-202/Hughes_GR_models_OSR2_counts-pos.pattern_11.n_22-vs-OSR2-202.alignment counts-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-202/Hughes_GR_models_OSR2_counts-pos.pattern_1.n_1703-vs-OSR2-202.alignment counts-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-202/Hughes_GR_models_OSR2_counts-pos.pattern_2.n_626-vs-OSR2-202.alignment counts-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-202/Hughes_GR_models_OSR2_counts-pos.pattern_3.n_579-vs-OSR2-202.alignment counts-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-202/Hughes_GR_models_OSR2_counts-pos.pattern_4.n_306-vs-OSR2-202.alignment counts-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-202/Hughes_GR_models_OSR2_counts-pos.pattern_5.n_229-vs-OSR2-202.alignment counts-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-202/Hughes_GR_models_OSR2_counts-pos.pattern_6.n_168-vs-OSR2-202.alignment counts-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-202/Hughes_GR_models_OSR2_counts-pos.pattern_7.n_137-vs-OSR2-202.alignment counts-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-202/Hughes_GR_models_OSR2_counts-pos.pattern_8.n_80-vs-OSR2-202.alignment counts-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-202/Hughes_GR_models_OSR2_counts-pos.pattern_9.n_49-vs-OSR2-202.alignment counts-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-202/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_counts_pattern_0.n_6981-vs-OSR2-202.alignment counts-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-202/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_counts_pattern_10.n_89-vs-OSR2-202.alignment counts-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-202/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_counts_pattern_11.n_45-vs-OSR2-202.alignment counts-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-202/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_counts_pattern_12.n_23-vs-OSR2-202.alignment counts-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-202/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_counts_pattern_13.n_22-vs-OSR2-202.alignment counts-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-202/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_counts_pattern_1.n_4280-vs-OSR2-202.alignment counts-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-202/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_counts_pattern_2.n_2799-vs-OSR2-202.alignment counts-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-202/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_counts_pattern_3.n_2380-vs-OSR2-202.alignment counts-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-202/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_counts_pattern_4.n_2192-vs-OSR2-202.alignment counts-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-202/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_counts_pattern_5.n_2109-vs-OSR2-202.alignment counts-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-202/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_counts_pattern_6.n_1833-vs-OSR2-202.alignment counts-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-202/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_counts_pattern_7.n_627-vs-OSR2-202.alignment counts-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-202/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_counts_pattern_8.n_234-vs-OSR2-202.alignment counts-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-202/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_counts_pattern_9.n_119-vs-OSR2-202.alignment counts-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-203/Hughes_GR_models_OSR2_counts-pos.pattern_0.n_5652-vs-OSR2-203.alignment counts-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-203/Hughes_GR_models_OSR2_counts-pos.pattern_10.n_48-vs-OSR2-203.alignment counts-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-203/Hughes_GR_models_OSR2_counts-pos.pattern_11.n_22-vs-OSR2-203.alignment counts-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-203/Hughes_GR_models_OSR2_counts-pos.pattern_1.n_1703-vs-OSR2-203.alignment counts-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-203/Hughes_GR_models_OSR2_counts-pos.pattern_2.n_626-vs-OSR2-203.alignment counts-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-203/Hughes_GR_models_OSR2_counts-pos.pattern_3.n_579-vs-OSR2-203.alignment counts-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-203/Hughes_GR_models_OSR2_counts-pos.pattern_4.n_306-vs-OSR2-203.alignment counts-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-203/Hughes_GR_models_OSR2_counts-pos.pattern_5.n_229-vs-OSR2-203.alignment counts-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-203/Hughes_GR_models_OSR2_counts-pos.pattern_6.n_168-vs-OSR2-203.alignment counts-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-203/Hughes_GR_models_OSR2_counts-pos.pattern_7.n_137-vs-OSR2-203.alignment counts-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-203/Hughes_GR_models_OSR2_counts-pos.pattern_8.n_80-vs-OSR2-203.alignment counts-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-203/Hughes_GR_models_OSR2_counts-pos.pattern_9.n_49-vs-OSR2-203.alignment counts-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-203/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_counts_pattern_0.n_6981-vs-OSR2-203.alignment counts-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-203/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_counts_pattern_10.n_89-vs-OSR2-203.alignment counts-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-203/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_counts_pattern_11.n_45-vs-OSR2-203.alignment counts-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-203/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_counts_pattern_12.n_23-vs-OSR2-203.alignment counts-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-203/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_counts_pattern_13.n_22-vs-OSR2-203.alignment counts-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-203/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_counts_pattern_1.n_4280-vs-OSR2-203.alignment counts-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-203/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_counts_pattern_2.n_2799-vs-OSR2-203.alignment counts-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-203/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_counts_pattern_3.n_2380-vs-OSR2-203.alignment counts-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-203/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_counts_pattern_4.n_2192-vs-OSR2-203.alignment counts-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-203/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_counts_pattern_5.n_2109-vs-OSR2-203.alignment counts-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-203/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_counts_pattern_6.n_1833-vs-OSR2-203.alignment counts-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-203/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_counts_pattern_7.n_627-vs-OSR2-203.alignment counts-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-203/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_counts_pattern_8.n_234-vs-OSR2-203.alignment counts-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OSR2-203/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_counts_pattern_9.n_119-vs-OSR2-203.alignment counts-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OVOL1-201/pos_patterns.ENCSR829WBA_ChIP_OVOL1_MCF-7_ENCSR446WNF_counts_pattern_0.n_7066-vs-OVOL1-201.alignment counts-znf_b1h_alignment/OVOL1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OVOL1-201/pos_patterns.ENCSR829WBA_ChIP_OVOL1_MCF-7_ENCSR446WNF_counts_pattern_10.n_78-vs-OVOL1-201.alignment counts-znf_b1h_alignment/OVOL1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OVOL1-201/pos_patterns.ENCSR829WBA_ChIP_OVOL1_MCF-7_ENCSR446WNF_counts_pattern_11.n_40-vs-OVOL1-201.alignment counts-znf_b1h_alignment/OVOL1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OVOL1-201/pos_patterns.ENCSR829WBA_ChIP_OVOL1_MCF-7_ENCSR446WNF_counts_pattern_12.n_25-vs-OVOL1-201.alignment counts-znf_b1h_alignment/OVOL1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OVOL1-201/pos_patterns.ENCSR829WBA_ChIP_OVOL1_MCF-7_ENCSR446WNF_counts_pattern_13.n_23-vs-OVOL1-201.alignment counts-znf_b1h_alignment/OVOL1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OVOL1-201/pos_patterns.ENCSR829WBA_ChIP_OVOL1_MCF-7_ENCSR446WNF_counts_pattern_14.n_20-vs-OVOL1-201.alignment counts-znf_b1h_alignment/OVOL1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OVOL1-201/pos_patterns.ENCSR829WBA_ChIP_OVOL1_MCF-7_ENCSR446WNF_counts_pattern_1.n_3895-vs-OVOL1-201.alignment counts-znf_b1h_alignment/OVOL1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OVOL1-201/pos_patterns.ENCSR829WBA_ChIP_OVOL1_MCF-7_ENCSR446WNF_counts_pattern_2.n_3055-vs-OVOL1-201.alignment counts-znf_b1h_alignment/OVOL1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OVOL1-201/pos_patterns.ENCSR829WBA_ChIP_OVOL1_MCF-7_ENCSR446WNF_counts_pattern_3.n_2974-vs-OVOL1-201.alignment counts-znf_b1h_alignment/OVOL1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OVOL1-201/pos_patterns.ENCSR829WBA_ChIP_OVOL1_MCF-7_ENCSR446WNF_counts_pattern_4.n_939-vs-OVOL1-201.alignment counts-znf_b1h_alignment/OVOL1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OVOL1-201/pos_patterns.ENCSR829WBA_ChIP_OVOL1_MCF-7_ENCSR446WNF_counts_pattern_5.n_430-vs-OVOL1-201.alignment counts-znf_b1h_alignment/OVOL1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OVOL1-201/pos_patterns.ENCSR829WBA_ChIP_OVOL1_MCF-7_ENCSR446WNF_counts_pattern_6.n_373-vs-OVOL1-201.alignment counts-znf_b1h_alignment/OVOL1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OVOL1-201/pos_patterns.ENCSR829WBA_ChIP_OVOL1_MCF-7_ENCSR446WNF_counts_pattern_7.n_221-vs-OVOL1-201.alignment counts-znf_b1h_alignment/OVOL1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OVOL1-201/pos_patterns.ENCSR829WBA_ChIP_OVOL1_MCF-7_ENCSR446WNF_counts_pattern_8.n_135-vs-OVOL1-201.alignment counts-znf_b1h_alignment/OVOL1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OVOL1-201/pos_patterns.ENCSR829WBA_ChIP_OVOL1_MCF-7_ENCSR446WNF_counts_pattern_9.n_121-vs-OVOL1-201.alignment counts-znf_b1h_alignment/OVOL1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OVOL3-202/neg_patterns.ENCSR768LIO_ChIP_OVOL3_HEK293_ENCSR383FZP_counts_pattern_0.n_20-vs-OVOL3-202.alignment counts-znf_b1h_alignment/OVOL3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OVOL3-202/pos_patterns.ENCSR768LIO_ChIP_OVOL3_HEK293_ENCSR383FZP_counts_pattern_0.n_1814-vs-OVOL3-202.alignment counts-znf_b1h_alignment/OVOL3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OVOL3-202/pos_patterns.ENCSR768LIO_ChIP_OVOL3_HEK293_ENCSR383FZP_counts_pattern_10.n_99-vs-OVOL3-202.alignment counts-znf_b1h_alignment/OVOL3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OVOL3-202/pos_patterns.ENCSR768LIO_ChIP_OVOL3_HEK293_ENCSR383FZP_counts_pattern_11.n_46-vs-OVOL3-202.alignment counts-znf_b1h_alignment/OVOL3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OVOL3-202/pos_patterns.ENCSR768LIO_ChIP_OVOL3_HEK293_ENCSR383FZP_counts_pattern_12.n_40-vs-OVOL3-202.alignment counts-znf_b1h_alignment/OVOL3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OVOL3-202/pos_patterns.ENCSR768LIO_ChIP_OVOL3_HEK293_ENCSR383FZP_counts_pattern_1.n_912-vs-OVOL3-202.alignment counts-znf_b1h_alignment/OVOL3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OVOL3-202/pos_patterns.ENCSR768LIO_ChIP_OVOL3_HEK293_ENCSR383FZP_counts_pattern_2.n_674-vs-OVOL3-202.alignment counts-znf_b1h_alignment/OVOL3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OVOL3-202/pos_patterns.ENCSR768LIO_ChIP_OVOL3_HEK293_ENCSR383FZP_counts_pattern_3.n_661-vs-OVOL3-202.alignment counts-znf_b1h_alignment/OVOL3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OVOL3-202/pos_patterns.ENCSR768LIO_ChIP_OVOL3_HEK293_ENCSR383FZP_counts_pattern_4.n_655-vs-OVOL3-202.alignment counts-znf_b1h_alignment/OVOL3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OVOL3-202/pos_patterns.ENCSR768LIO_ChIP_OVOL3_HEK293_ENCSR383FZP_counts_pattern_5.n_304-vs-OVOL3-202.alignment counts-znf_b1h_alignment/OVOL3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OVOL3-202/pos_patterns.ENCSR768LIO_ChIP_OVOL3_HEK293_ENCSR383FZP_counts_pattern_6.n_269-vs-OVOL3-202.alignment counts-znf_b1h_alignment/OVOL3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OVOL3-202/pos_patterns.ENCSR768LIO_ChIP_OVOL3_HEK293_ENCSR383FZP_counts_pattern_7.n_192-vs-OVOL3-202.alignment counts-znf_b1h_alignment/OVOL3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OVOL3-202/pos_patterns.ENCSR768LIO_ChIP_OVOL3_HEK293_ENCSR383FZP_counts_pattern_8.n_169-vs-OVOL3-202.alignment counts-znf_b1h_alignment/OVOL3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/OVOL3-202/pos_patterns.ENCSR768LIO_ChIP_OVOL3_HEK293_ENCSR383FZP_counts_pattern_9.n_126-vs-OVOL3-202.alignment counts-znf_b1h_alignment/OVOL3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/Hughes_GR_models_PATZ1_counts-pos.pattern_0.n_1896-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/Hughes_GR_models_PATZ1_counts-pos.pattern_1.n_51-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/neg_patterns.ENCSR549PVK_ChIP_PATZ1_K562_ENCSR204MBZ_counts_pattern_0.n_53-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/neg_patterns.ENCSR549PVK_ChIP_PATZ1_K562_ENCSR204MBZ_counts_pattern_1.n_41-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/neg_patterns.ENCSR549PVK_ChIP_PATZ1_K562_ENCSR204MBZ_counts_pattern_2.n_36-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR549PVK_ChIP_PATZ1_K562_ENCSR204MBZ_counts_pattern_0.n_553-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR549PVK_ChIP_PATZ1_K562_ENCSR204MBZ_counts_pattern_1.n_63-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR549PVK_ChIP_PATZ1_K562_ENCSR204MBZ_counts_pattern_2.n_60-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR549PVK_ChIP_PATZ1_K562_ENCSR204MBZ_counts_pattern_3.n_54-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR549PVK_ChIP_PATZ1_K562_ENCSR204MBZ_counts_pattern_4.n_49-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR549PVK_ChIP_PATZ1_K562_ENCSR204MBZ_counts_pattern_5.n_20-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_0.n_7461-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_10.n_629-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_11.n_543-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_12.n_336-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_13.n_193-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_14.n_182-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_15.n_155-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_16.n_86-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_17.n_69-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_18.n_51-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_19.n_38-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_1.n_5201-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_20.n_33-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_21.n_33-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_2.n_2674-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_3.n_2508-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_4.n_2465-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_5.n_2370-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_6.n_2084-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_7.n_774-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_8.n_666-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_9.n_633-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_0.n_13229-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_10.n_115-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_11.n_49-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_12.n_42-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_13.n_42-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_1.n_2832-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_2.n_2682-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_3.n_2403-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_4.n_1949-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_5.n_623-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_6.n_596-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_7.n_461-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_8.n_374-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_9.n_219-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR969AIM_ChIP_PATZ1_SK-N-SH_ENCSR712MTB_counts_pattern_0.n_2441-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR969AIM_ChIP_PATZ1_SK-N-SH_ENCSR712MTB_counts_pattern_1.n_2352-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR969AIM_ChIP_PATZ1_SK-N-SH_ENCSR712MTB_counts_pattern_2.n_654-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR969AIM_ChIP_PATZ1_SK-N-SH_ENCSR712MTB_counts_pattern_3.n_495-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR969AIM_ChIP_PATZ1_SK-N-SH_ENCSR712MTB_counts_pattern_4.n_212-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR969AIM_ChIP_PATZ1_SK-N-SH_ENCSR712MTB_counts_pattern_5.n_61-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR969AIM_ChIP_PATZ1_SK-N-SH_ENCSR712MTB_counts_pattern_6.n_37-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-201/pos_patterns.ENCSR969AIM_ChIP_PATZ1_SK-N-SH_ENCSR712MTB_counts_pattern_7.n_31-vs-PATZ1-201.alignment counts-znf_b1h_alignment/PATZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/Hughes_GR_models_PATZ1_counts-pos.pattern_0.n_1896-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/Hughes_GR_models_PATZ1_counts-pos.pattern_1.n_51-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/neg_patterns.ENCSR549PVK_ChIP_PATZ1_K562_ENCSR204MBZ_counts_pattern_0.n_53-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/neg_patterns.ENCSR549PVK_ChIP_PATZ1_K562_ENCSR204MBZ_counts_pattern_1.n_41-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/neg_patterns.ENCSR549PVK_ChIP_PATZ1_K562_ENCSR204MBZ_counts_pattern_2.n_36-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR549PVK_ChIP_PATZ1_K562_ENCSR204MBZ_counts_pattern_0.n_553-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR549PVK_ChIP_PATZ1_K562_ENCSR204MBZ_counts_pattern_1.n_63-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR549PVK_ChIP_PATZ1_K562_ENCSR204MBZ_counts_pattern_2.n_60-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR549PVK_ChIP_PATZ1_K562_ENCSR204MBZ_counts_pattern_3.n_54-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR549PVK_ChIP_PATZ1_K562_ENCSR204MBZ_counts_pattern_4.n_49-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR549PVK_ChIP_PATZ1_K562_ENCSR204MBZ_counts_pattern_5.n_20-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_0.n_7461-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_10.n_629-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_11.n_543-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_12.n_336-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_13.n_193-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_14.n_182-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_15.n_155-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_16.n_86-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_17.n_69-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_18.n_51-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_19.n_38-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_1.n_5201-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_20.n_33-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_21.n_33-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_2.n_2674-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_3.n_2508-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_4.n_2465-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_5.n_2370-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_6.n_2084-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_7.n_774-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_8.n_666-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_9.n_633-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_0.n_13229-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_10.n_115-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_11.n_49-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_12.n_42-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_13.n_42-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_1.n_2832-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_2.n_2682-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_3.n_2403-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_4.n_1949-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_5.n_623-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_6.n_596-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_7.n_461-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_8.n_374-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_9.n_219-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR969AIM_ChIP_PATZ1_SK-N-SH_ENCSR712MTB_counts_pattern_0.n_2441-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR969AIM_ChIP_PATZ1_SK-N-SH_ENCSR712MTB_counts_pattern_1.n_2352-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR969AIM_ChIP_PATZ1_SK-N-SH_ENCSR712MTB_counts_pattern_2.n_654-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR969AIM_ChIP_PATZ1_SK-N-SH_ENCSR712MTB_counts_pattern_3.n_495-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR969AIM_ChIP_PATZ1_SK-N-SH_ENCSR712MTB_counts_pattern_4.n_212-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR969AIM_ChIP_PATZ1_SK-N-SH_ENCSR712MTB_counts_pattern_5.n_61-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR969AIM_ChIP_PATZ1_SK-N-SH_ENCSR712MTB_counts_pattern_6.n_37-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR969AIM_ChIP_PATZ1_SK-N-SH_ENCSR712MTB_counts_pattern_7.n_31-vs-PATZ1-202.alignment counts-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/Hughes_GR_models_PATZ1_counts-pos.pattern_0.n_1896-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/Hughes_GR_models_PATZ1_counts-pos.pattern_1.n_51-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/neg_patterns.ENCSR549PVK_ChIP_PATZ1_K562_ENCSR204MBZ_counts_pattern_0.n_53-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/neg_patterns.ENCSR549PVK_ChIP_PATZ1_K562_ENCSR204MBZ_counts_pattern_1.n_41-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/neg_patterns.ENCSR549PVK_ChIP_PATZ1_K562_ENCSR204MBZ_counts_pattern_2.n_36-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR549PVK_ChIP_PATZ1_K562_ENCSR204MBZ_counts_pattern_0.n_553-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR549PVK_ChIP_PATZ1_K562_ENCSR204MBZ_counts_pattern_1.n_63-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR549PVK_ChIP_PATZ1_K562_ENCSR204MBZ_counts_pattern_2.n_60-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR549PVK_ChIP_PATZ1_K562_ENCSR204MBZ_counts_pattern_3.n_54-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR549PVK_ChIP_PATZ1_K562_ENCSR204MBZ_counts_pattern_4.n_49-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR549PVK_ChIP_PATZ1_K562_ENCSR204MBZ_counts_pattern_5.n_20-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_0.n_7461-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_10.n_629-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_11.n_543-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_12.n_336-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_13.n_193-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_14.n_182-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_15.n_155-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_16.n_86-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_17.n_69-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_18.n_51-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_19.n_38-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_1.n_5201-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_20.n_33-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_21.n_33-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_2.n_2674-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_3.n_2508-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_4.n_2465-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_5.n_2370-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_6.n_2084-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_7.n_774-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_8.n_666-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_9.n_633-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_0.n_13229-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_10.n_115-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_11.n_49-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_12.n_42-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_13.n_42-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_1.n_2832-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_2.n_2682-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_3.n_2403-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_4.n_1949-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_5.n_623-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_6.n_596-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_7.n_461-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_8.n_374-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_9.n_219-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR969AIM_ChIP_PATZ1_SK-N-SH_ENCSR712MTB_counts_pattern_0.n_2441-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR969AIM_ChIP_PATZ1_SK-N-SH_ENCSR712MTB_counts_pattern_1.n_2352-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR969AIM_ChIP_PATZ1_SK-N-SH_ENCSR712MTB_counts_pattern_2.n_654-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR969AIM_ChIP_PATZ1_SK-N-SH_ENCSR712MTB_counts_pattern_3.n_495-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR969AIM_ChIP_PATZ1_SK-N-SH_ENCSR712MTB_counts_pattern_4.n_212-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR969AIM_ChIP_PATZ1_SK-N-SH_ENCSR712MTB_counts_pattern_5.n_61-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR969AIM_ChIP_PATZ1_SK-N-SH_ENCSR712MTB_counts_pattern_6.n_37-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-203/pos_patterns.ENCSR969AIM_ChIP_PATZ1_SK-N-SH_ENCSR712MTB_counts_pattern_7.n_31-vs-PATZ1-203.alignment counts-znf_b1h_alignment/PATZ1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/Hughes_GR_models_PATZ1_counts-pos.pattern_0.n_1896-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/Hughes_GR_models_PATZ1_counts-pos.pattern_1.n_51-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/neg_patterns.ENCSR549PVK_ChIP_PATZ1_K562_ENCSR204MBZ_counts_pattern_0.n_53-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/neg_patterns.ENCSR549PVK_ChIP_PATZ1_K562_ENCSR204MBZ_counts_pattern_1.n_41-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/neg_patterns.ENCSR549PVK_ChIP_PATZ1_K562_ENCSR204MBZ_counts_pattern_2.n_36-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR549PVK_ChIP_PATZ1_K562_ENCSR204MBZ_counts_pattern_0.n_553-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR549PVK_ChIP_PATZ1_K562_ENCSR204MBZ_counts_pattern_1.n_63-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR549PVK_ChIP_PATZ1_K562_ENCSR204MBZ_counts_pattern_2.n_60-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR549PVK_ChIP_PATZ1_K562_ENCSR204MBZ_counts_pattern_3.n_54-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR549PVK_ChIP_PATZ1_K562_ENCSR204MBZ_counts_pattern_4.n_49-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR549PVK_ChIP_PATZ1_K562_ENCSR204MBZ_counts_pattern_5.n_20-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_0.n_7461-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_10.n_629-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_11.n_543-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_12.n_336-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_13.n_193-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_14.n_182-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_15.n_155-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_16.n_86-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_17.n_69-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_18.n_51-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_19.n_38-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_1.n_5201-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_20.n_33-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_21.n_33-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_2.n_2674-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_3.n_2508-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_4.n_2465-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_5.n_2370-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_6.n_2084-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_7.n_774-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_8.n_666-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR658YLN_ChIP_PATZ1_HepG2_ENCSR507HQC_counts_pattern_9.n_633-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_0.n_13229-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_10.n_115-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_11.n_49-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_12.n_42-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_13.n_42-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_1.n_2832-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_2.n_2682-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_3.n_2403-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_4.n_1949-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_5.n_623-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_6.n_596-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_7.n_461-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_8.n_374-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR966ULI_ChIP_PATZ1_HEK293_ENCSR024NUR_counts_pattern_9.n_219-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR969AIM_ChIP_PATZ1_SK-N-SH_ENCSR712MTB_counts_pattern_0.n_2441-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR969AIM_ChIP_PATZ1_SK-N-SH_ENCSR712MTB_counts_pattern_1.n_2352-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR969AIM_ChIP_PATZ1_SK-N-SH_ENCSR712MTB_counts_pattern_2.n_654-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR969AIM_ChIP_PATZ1_SK-N-SH_ENCSR712MTB_counts_pattern_3.n_495-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR969AIM_ChIP_PATZ1_SK-N-SH_ENCSR712MTB_counts_pattern_4.n_212-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR969AIM_ChIP_PATZ1_SK-N-SH_ENCSR712MTB_counts_pattern_5.n_61-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR969AIM_ChIP_PATZ1_SK-N-SH_ENCSR712MTB_counts_pattern_6.n_37-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PATZ1-204/pos_patterns.ENCSR969AIM_ChIP_PATZ1_SK-N-SH_ENCSR712MTB_counts_pattern_7.n_31-vs-PATZ1-204.alignment counts-znf_b1h_alignment/PATZ1-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM10-201/neg_patterns.ENCSR289PSX_ChIP_PRDM10_HepG2_ENCSR263GYU_counts_pattern_0.n_24-vs-PRDM10-201.alignment counts-znf_b1h_alignment/PRDM10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM10-201/neg_patterns.ENCSR289PSX_ChIP_PRDM10_HepG2_ENCSR263GYU_counts_pattern_1.n_21-vs-PRDM10-201.alignment counts-znf_b1h_alignment/PRDM10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM10-201/neg_patterns.ENCSR289PSX_ChIP_PRDM10_HepG2_ENCSR263GYU_counts_pattern_2.n_20-vs-PRDM10-201.alignment counts-znf_b1h_alignment/PRDM10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM10-201/pos_patterns.ENCSR120MPG_ChIP_PRDM10_K562_ENCSR413MCR_counts_pattern_0.n_14287-vs-PRDM10-201.alignment counts-znf_b1h_alignment/PRDM10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM10-201/pos_patterns.ENCSR120MPG_ChIP_PRDM10_K562_ENCSR413MCR_counts_pattern_1.n_7116-vs-PRDM10-201.alignment counts-znf_b1h_alignment/PRDM10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM10-201/pos_patterns.ENCSR120MPG_ChIP_PRDM10_K562_ENCSR413MCR_counts_pattern_2.n_1273-vs-PRDM10-201.alignment counts-znf_b1h_alignment/PRDM10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM10-201/pos_patterns.ENCSR120MPG_ChIP_PRDM10_K562_ENCSR413MCR_counts_pattern_3.n_732-vs-PRDM10-201.alignment counts-znf_b1h_alignment/PRDM10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM10-201/pos_patterns.ENCSR120MPG_ChIP_PRDM10_K562_ENCSR413MCR_counts_pattern_4.n_308-vs-PRDM10-201.alignment counts-znf_b1h_alignment/PRDM10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM10-201/pos_patterns.ENCSR120MPG_ChIP_PRDM10_K562_ENCSR413MCR_counts_pattern_5.n_172-vs-PRDM10-201.alignment counts-znf_b1h_alignment/PRDM10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM10-201/pos_patterns.ENCSR120MPG_ChIP_PRDM10_K562_ENCSR413MCR_counts_pattern_6.n_63-vs-PRDM10-201.alignment counts-znf_b1h_alignment/PRDM10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM10-201/pos_patterns.ENCSR120MPG_ChIP_PRDM10_K562_ENCSR413MCR_counts_pattern_7.n_53-vs-PRDM10-201.alignment counts-znf_b1h_alignment/PRDM10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM10-201/pos_patterns.ENCSR120MPG_ChIP_PRDM10_K562_ENCSR413MCR_counts_pattern_8.n_24-vs-PRDM10-201.alignment counts-znf_b1h_alignment/PRDM10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM10-201/pos_patterns.ENCSR223TAV_ChIP_PRDM10_HEK293_ENCSR076JOR_counts_pattern_0.n_19880-vs-PRDM10-201.alignment counts-znf_b1h_alignment/PRDM10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM10-201/pos_patterns.ENCSR223TAV_ChIP_PRDM10_HEK293_ENCSR076JOR_counts_pattern_10.n_139-vs-PRDM10-201.alignment counts-znf_b1h_alignment/PRDM10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM10-201/pos_patterns.ENCSR223TAV_ChIP_PRDM10_HEK293_ENCSR076JOR_counts_pattern_11.n_21-vs-PRDM10-201.alignment counts-znf_b1h_alignment/PRDM10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM10-201/pos_patterns.ENCSR223TAV_ChIP_PRDM10_HEK293_ENCSR076JOR_counts_pattern_1.n_3517-vs-PRDM10-201.alignment counts-znf_b1h_alignment/PRDM10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM10-201/pos_patterns.ENCSR223TAV_ChIP_PRDM10_HEK293_ENCSR076JOR_counts_pattern_2.n_2812-vs-PRDM10-201.alignment counts-znf_b1h_alignment/PRDM10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM10-201/pos_patterns.ENCSR223TAV_ChIP_PRDM10_HEK293_ENCSR076JOR_counts_pattern_3.n_1922-vs-PRDM10-201.alignment counts-znf_b1h_alignment/PRDM10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM10-201/pos_patterns.ENCSR223TAV_ChIP_PRDM10_HEK293_ENCSR076JOR_counts_pattern_4.n_1452-vs-PRDM10-201.alignment counts-znf_b1h_alignment/PRDM10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM10-201/pos_patterns.ENCSR223TAV_ChIP_PRDM10_HEK293_ENCSR076JOR_counts_pattern_5.n_1212-vs-PRDM10-201.alignment counts-znf_b1h_alignment/PRDM10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM10-201/pos_patterns.ENCSR223TAV_ChIP_PRDM10_HEK293_ENCSR076JOR_counts_pattern_6.n_1198-vs-PRDM10-201.alignment counts-znf_b1h_alignment/PRDM10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM10-201/pos_patterns.ENCSR223TAV_ChIP_PRDM10_HEK293_ENCSR076JOR_counts_pattern_7.n_1181-vs-PRDM10-201.alignment counts-znf_b1h_alignment/PRDM10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM10-201/pos_patterns.ENCSR223TAV_ChIP_PRDM10_HEK293_ENCSR076JOR_counts_pattern_8.n_238-vs-PRDM10-201.alignment counts-znf_b1h_alignment/PRDM10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM10-201/pos_patterns.ENCSR223TAV_ChIP_PRDM10_HEK293_ENCSR076JOR_counts_pattern_9.n_153-vs-PRDM10-201.alignment counts-znf_b1h_alignment/PRDM10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM10-201/pos_patterns.ENCSR289PSX_ChIP_PRDM10_HepG2_ENCSR263GYU_counts_pattern_0.n_4627-vs-PRDM10-201.alignment counts-znf_b1h_alignment/PRDM10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM10-201/pos_patterns.ENCSR289PSX_ChIP_PRDM10_HepG2_ENCSR263GYU_counts_pattern_10.n_131-vs-PRDM10-201.alignment counts-znf_b1h_alignment/PRDM10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM10-201/pos_patterns.ENCSR289PSX_ChIP_PRDM10_HepG2_ENCSR263GYU_counts_pattern_11.n_78-vs-PRDM10-201.alignment counts-znf_b1h_alignment/PRDM10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM10-201/pos_patterns.ENCSR289PSX_ChIP_PRDM10_HepG2_ENCSR263GYU_counts_pattern_12.n_33-vs-PRDM10-201.alignment counts-znf_b1h_alignment/PRDM10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM10-201/pos_patterns.ENCSR289PSX_ChIP_PRDM10_HepG2_ENCSR263GYU_counts_pattern_1.n_651-vs-PRDM10-201.alignment counts-znf_b1h_alignment/PRDM10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM10-201/pos_patterns.ENCSR289PSX_ChIP_PRDM10_HepG2_ENCSR263GYU_counts_pattern_2.n_591-vs-PRDM10-201.alignment counts-znf_b1h_alignment/PRDM10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM10-201/pos_patterns.ENCSR289PSX_ChIP_PRDM10_HepG2_ENCSR263GYU_counts_pattern_3.n_563-vs-PRDM10-201.alignment counts-znf_b1h_alignment/PRDM10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM10-201/pos_patterns.ENCSR289PSX_ChIP_PRDM10_HepG2_ENCSR263GYU_counts_pattern_4.n_417-vs-PRDM10-201.alignment counts-znf_b1h_alignment/PRDM10-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM1-201/Hughes_GR_models_PRDM1_counts-pos.pattern_13.n_24-vs-PRDM1-201.alignment counts-znf_b1h_alignment/PRDM1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM1-201/pos_patterns.ENCSR098YLE_ChIP_PRDM1_HEK293_ENCSR613DGQ_counts_pattern_0.n_16764-vs-PRDM1-201.alignment counts-znf_b1h_alignment/PRDM1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM1-201/pos_patterns.ENCSR098YLE_ChIP_PRDM1_HEK293_ENCSR613DGQ_counts_pattern_18.n_178-vs-PRDM1-201.alignment counts-znf_b1h_alignment/PRDM1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM1-201/pos_patterns.ENCSR098YLE_ChIP_PRDM1_HEK293_ENCSR613DGQ_counts_pattern_5.n_1045-vs-PRDM1-201.alignment counts-znf_b1h_alignment/PRDM1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM1-201/pos_patterns.ENCSR098YLE_ChIP_PRDM1_HEK293_ENCSR613DGQ_counts_pattern_6.n_1001-vs-PRDM1-201.alignment counts-znf_b1h_alignment/PRDM1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM1-201/pos_patterns.ENCSR098YLE_ChIP_PRDM1_HEK293_ENCSR613DGQ_counts_pattern_7.n_565-vs-PRDM1-201.alignment counts-znf_b1h_alignment/PRDM1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM1-201/pos_patterns.ENCSR098YLE_ChIP_PRDM1_HEK293_ENCSR613DGQ_counts_pattern_8.n_540-vs-PRDM1-201.alignment counts-znf_b1h_alignment/PRDM1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM1-201/pos_patterns.ENCSR098YLE_ChIP_PRDM1_HEK293_ENCSR613DGQ_counts_pattern_9.n_430-vs-PRDM1-201.alignment counts-znf_b1h_alignment/PRDM1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM1-201/pos_patterns.ENCSR977FEF_ChIP_PRDM1_A549_ENCSR852CZQ_counts_pattern_0.n_6322-vs-PRDM1-201.alignment counts-znf_b1h_alignment/PRDM1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM1-201/pos_patterns.ENCSR977FEF_ChIP_PRDM1_A549_ENCSR852CZQ_counts_pattern_10.n_62-vs-PRDM1-201.alignment counts-znf_b1h_alignment/PRDM1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM1-201/pos_patterns.ENCSR977FEF_ChIP_PRDM1_A549_ENCSR852CZQ_counts_pattern_11.n_52-vs-PRDM1-201.alignment counts-znf_b1h_alignment/PRDM1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM1-201/pos_patterns.ENCSR977FEF_ChIP_PRDM1_A549_ENCSR852CZQ_counts_pattern_12.n_51-vs-PRDM1-201.alignment counts-znf_b1h_alignment/PRDM1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM1-201/pos_patterns.ENCSR977FEF_ChIP_PRDM1_A549_ENCSR852CZQ_counts_pattern_13.n_28-vs-PRDM1-201.alignment counts-znf_b1h_alignment/PRDM1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM1-201/pos_patterns.ENCSR977FEF_ChIP_PRDM1_A549_ENCSR852CZQ_counts_pattern_14.n_25-vs-PRDM1-201.alignment counts-znf_b1h_alignment/PRDM1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM1-201/pos_patterns.ENCSR977FEF_ChIP_PRDM1_A549_ENCSR852CZQ_counts_pattern_15.n_20-vs-PRDM1-201.alignment counts-znf_b1h_alignment/PRDM1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM1-201/pos_patterns.ENCSR977FEF_ChIP_PRDM1_A549_ENCSR852CZQ_counts_pattern_1.n_3915-vs-PRDM1-201.alignment counts-znf_b1h_alignment/PRDM1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM1-201/pos_patterns.ENCSR977FEF_ChIP_PRDM1_A549_ENCSR852CZQ_counts_pattern_2.n_1981-vs-PRDM1-201.alignment counts-znf_b1h_alignment/PRDM1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM1-201/pos_patterns.ENCSR977FEF_ChIP_PRDM1_A549_ENCSR852CZQ_counts_pattern_3.n_885-vs-PRDM1-201.alignment counts-znf_b1h_alignment/PRDM1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM1-201/pos_patterns.ENCSR977FEF_ChIP_PRDM1_A549_ENCSR852CZQ_counts_pattern_4.n_461-vs-PRDM1-201.alignment counts-znf_b1h_alignment/PRDM1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM1-201/pos_patterns.ENCSR977FEF_ChIP_PRDM1_A549_ENCSR852CZQ_counts_pattern_5.n_395-vs-PRDM1-201.alignment counts-znf_b1h_alignment/PRDM1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM1-201/pos_patterns.ENCSR977FEF_ChIP_PRDM1_A549_ENCSR852CZQ_counts_pattern_6.n_305-vs-PRDM1-201.alignment counts-znf_b1h_alignment/PRDM1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM1-201/pos_patterns.ENCSR977FEF_ChIP_PRDM1_A549_ENCSR852CZQ_counts_pattern_7.n_217-vs-PRDM1-201.alignment counts-znf_b1h_alignment/PRDM1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM1-201/pos_patterns.ENCSR977FEF_ChIP_PRDM1_A549_ENCSR852CZQ_counts_pattern_8.n_64-vs-PRDM1-201.alignment counts-znf_b1h_alignment/PRDM1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM1-201/pos_patterns.ENCSR977FEF_ChIP_PRDM1_A549_ENCSR852CZQ_counts_pattern_9.n_63-vs-PRDM1-201.alignment counts-znf_b1h_alignment/PRDM1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-201/neg_patterns.ENCSR092DCD_ChIP_PRDM15_WTC11_ENCSR239YJA_counts_pattern_0.n_35-vs-PRDM15-201.alignment counts-znf_b1h_alignment/PRDM15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-201/neg_patterns.ENCSR092DCD_ChIP_PRDM15_WTC11_ENCSR239YJA_counts_pattern_1.n_30-vs-PRDM15-201.alignment counts-znf_b1h_alignment/PRDM15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-201/pos_patterns.ENCSR011INW_ChIP_PRDM15_HepG2_ENCSR950RRT_counts_pattern_0.n_2915-vs-PRDM15-201.alignment counts-znf_b1h_alignment/PRDM15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-201/pos_patterns.ENCSR011INW_ChIP_PRDM15_HepG2_ENCSR950RRT_counts_pattern_10.n_78-vs-PRDM15-201.alignment counts-znf_b1h_alignment/PRDM15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-201/pos_patterns.ENCSR011INW_ChIP_PRDM15_HepG2_ENCSR950RRT_counts_pattern_11.n_66-vs-PRDM15-201.alignment counts-znf_b1h_alignment/PRDM15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-201/pos_patterns.ENCSR011INW_ChIP_PRDM15_HepG2_ENCSR950RRT_counts_pattern_12.n_29-vs-PRDM15-201.alignment counts-znf_b1h_alignment/PRDM15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-201/pos_patterns.ENCSR011INW_ChIP_PRDM15_HepG2_ENCSR950RRT_counts_pattern_13.n_23-vs-PRDM15-201.alignment counts-znf_b1h_alignment/PRDM15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-201/pos_patterns.ENCSR011INW_ChIP_PRDM15_HepG2_ENCSR950RRT_counts_pattern_1.n_1086-vs-PRDM15-201.alignment counts-znf_b1h_alignment/PRDM15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-201/pos_patterns.ENCSR011INW_ChIP_PRDM15_HepG2_ENCSR950RRT_counts_pattern_2.n_904-vs-PRDM15-201.alignment counts-znf_b1h_alignment/PRDM15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-201/pos_patterns.ENCSR011INW_ChIP_PRDM15_HepG2_ENCSR950RRT_counts_pattern_3.n_454-vs-PRDM15-201.alignment counts-znf_b1h_alignment/PRDM15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-201/pos_patterns.ENCSR011INW_ChIP_PRDM15_HepG2_ENCSR950RRT_counts_pattern_4.n_384-vs-PRDM15-201.alignment counts-znf_b1h_alignment/PRDM15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-201/pos_patterns.ENCSR011INW_ChIP_PRDM15_HepG2_ENCSR950RRT_counts_pattern_5.n_214-vs-PRDM15-201.alignment counts-znf_b1h_alignment/PRDM15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-201/pos_patterns.ENCSR011INW_ChIP_PRDM15_HepG2_ENCSR950RRT_counts_pattern_6.n_214-vs-PRDM15-201.alignment counts-znf_b1h_alignment/PRDM15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-201/pos_patterns.ENCSR011INW_ChIP_PRDM15_HepG2_ENCSR950RRT_counts_pattern_7.n_175-vs-PRDM15-201.alignment counts-znf_b1h_alignment/PRDM15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-201/pos_patterns.ENCSR011INW_ChIP_PRDM15_HepG2_ENCSR950RRT_counts_pattern_8.n_142-vs-PRDM15-201.alignment counts-znf_b1h_alignment/PRDM15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-201/pos_patterns.ENCSR011INW_ChIP_PRDM15_HepG2_ENCSR950RRT_counts_pattern_9.n_84-vs-PRDM15-201.alignment counts-znf_b1h_alignment/PRDM15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-201/pos_patterns.ENCSR092DCD_ChIP_PRDM15_WTC11_ENCSR239YJA_counts_pattern_0.n_6331-vs-PRDM15-201.alignment counts-znf_b1h_alignment/PRDM15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-201/pos_patterns.ENCSR092DCD_ChIP_PRDM15_WTC11_ENCSR239YJA_counts_pattern_10.n_20-vs-PRDM15-201.alignment counts-znf_b1h_alignment/PRDM15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-201/pos_patterns.ENCSR092DCD_ChIP_PRDM15_WTC11_ENCSR239YJA_counts_pattern_1.n_2193-vs-PRDM15-201.alignment counts-znf_b1h_alignment/PRDM15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-201/pos_patterns.ENCSR092DCD_ChIP_PRDM15_WTC11_ENCSR239YJA_counts_pattern_2.n_841-vs-PRDM15-201.alignment counts-znf_b1h_alignment/PRDM15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-201/pos_patterns.ENCSR092DCD_ChIP_PRDM15_WTC11_ENCSR239YJA_counts_pattern_3.n_637-vs-PRDM15-201.alignment counts-znf_b1h_alignment/PRDM15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-201/pos_patterns.ENCSR092DCD_ChIP_PRDM15_WTC11_ENCSR239YJA_counts_pattern_4.n_551-vs-PRDM15-201.alignment counts-znf_b1h_alignment/PRDM15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-201/pos_patterns.ENCSR092DCD_ChIP_PRDM15_WTC11_ENCSR239YJA_counts_pattern_5.n_370-vs-PRDM15-201.alignment counts-znf_b1h_alignment/PRDM15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-201/pos_patterns.ENCSR092DCD_ChIP_PRDM15_WTC11_ENCSR239YJA_counts_pattern_6.n_248-vs-PRDM15-201.alignment counts-znf_b1h_alignment/PRDM15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-201/pos_patterns.ENCSR092DCD_ChIP_PRDM15_WTC11_ENCSR239YJA_counts_pattern_7.n_175-vs-PRDM15-201.alignment counts-znf_b1h_alignment/PRDM15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-201/pos_patterns.ENCSR092DCD_ChIP_PRDM15_WTC11_ENCSR239YJA_counts_pattern_8.n_126-vs-PRDM15-201.alignment counts-znf_b1h_alignment/PRDM15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-201/pos_patterns.ENCSR092DCD_ChIP_PRDM15_WTC11_ENCSR239YJA_counts_pattern_9.n_83-vs-PRDM15-201.alignment counts-znf_b1h_alignment/PRDM15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-201/pos_patterns.ENCSR748SQL_ChIP_PRDM15_GM12878_ENCSR561QKH_counts_pattern_0.n_491-vs-PRDM15-201.alignment counts-znf_b1h_alignment/PRDM15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-201/pos_patterns.ENCSR748SQL_ChIP_PRDM15_GM12878_ENCSR561QKH_counts_pattern_1.n_121-vs-PRDM15-201.alignment counts-znf_b1h_alignment/PRDM15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-201/pos_patterns.ENCSR748SQL_ChIP_PRDM15_GM12878_ENCSR561QKH_counts_pattern_2.n_115-vs-PRDM15-201.alignment counts-znf_b1h_alignment/PRDM15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-201/pos_patterns.ENCSR748SQL_ChIP_PRDM15_GM12878_ENCSR561QKH_counts_pattern_3.n_90-vs-PRDM15-201.alignment counts-znf_b1h_alignment/PRDM15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-201/pos_patterns.ENCSR748SQL_ChIP_PRDM15_GM12878_ENCSR561QKH_counts_pattern_4.n_44-vs-PRDM15-201.alignment counts-znf_b1h_alignment/PRDM15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-201/pos_patterns.ENCSR748SQL_ChIP_PRDM15_GM12878_ENCSR561QKH_counts_pattern_5.n_28-vs-PRDM15-201.alignment counts-znf_b1h_alignment/PRDM15-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-208/neg_patterns.ENCSR092DCD_ChIP_PRDM15_WTC11_ENCSR239YJA_counts_pattern_0.n_35-vs-PRDM15-208.alignment counts-znf_b1h_alignment/PRDM15-208/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-208/pos_patterns.ENCSR011INW_ChIP_PRDM15_HepG2_ENCSR950RRT_counts_pattern_0.n_2915-vs-PRDM15-208.alignment counts-znf_b1h_alignment/PRDM15-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-208/pos_patterns.ENCSR011INW_ChIP_PRDM15_HepG2_ENCSR950RRT_counts_pattern_10.n_78-vs-PRDM15-208.alignment counts-znf_b1h_alignment/PRDM15-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-208/pos_patterns.ENCSR011INW_ChIP_PRDM15_HepG2_ENCSR950RRT_counts_pattern_11.n_66-vs-PRDM15-208.alignment counts-znf_b1h_alignment/PRDM15-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-208/pos_patterns.ENCSR011INW_ChIP_PRDM15_HepG2_ENCSR950RRT_counts_pattern_12.n_29-vs-PRDM15-208.alignment counts-znf_b1h_alignment/PRDM15-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-208/pos_patterns.ENCSR011INW_ChIP_PRDM15_HepG2_ENCSR950RRT_counts_pattern_13.n_23-vs-PRDM15-208.alignment counts-znf_b1h_alignment/PRDM15-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-208/pos_patterns.ENCSR011INW_ChIP_PRDM15_HepG2_ENCSR950RRT_counts_pattern_1.n_1086-vs-PRDM15-208.alignment counts-znf_b1h_alignment/PRDM15-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-208/pos_patterns.ENCSR011INW_ChIP_PRDM15_HepG2_ENCSR950RRT_counts_pattern_2.n_904-vs-PRDM15-208.alignment counts-znf_b1h_alignment/PRDM15-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-208/pos_patterns.ENCSR011INW_ChIP_PRDM15_HepG2_ENCSR950RRT_counts_pattern_3.n_454-vs-PRDM15-208.alignment counts-znf_b1h_alignment/PRDM15-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-208/pos_patterns.ENCSR011INW_ChIP_PRDM15_HepG2_ENCSR950RRT_counts_pattern_4.n_384-vs-PRDM15-208.alignment counts-znf_b1h_alignment/PRDM15-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-208/pos_patterns.ENCSR011INW_ChIP_PRDM15_HepG2_ENCSR950RRT_counts_pattern_5.n_214-vs-PRDM15-208.alignment counts-znf_b1h_alignment/PRDM15-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-208/pos_patterns.ENCSR011INW_ChIP_PRDM15_HepG2_ENCSR950RRT_counts_pattern_6.n_214-vs-PRDM15-208.alignment counts-znf_b1h_alignment/PRDM15-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-208/pos_patterns.ENCSR011INW_ChIP_PRDM15_HepG2_ENCSR950RRT_counts_pattern_7.n_175-vs-PRDM15-208.alignment counts-znf_b1h_alignment/PRDM15-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-208/pos_patterns.ENCSR011INW_ChIP_PRDM15_HepG2_ENCSR950RRT_counts_pattern_8.n_142-vs-PRDM15-208.alignment counts-znf_b1h_alignment/PRDM15-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-208/pos_patterns.ENCSR011INW_ChIP_PRDM15_HepG2_ENCSR950RRT_counts_pattern_9.n_84-vs-PRDM15-208.alignment counts-znf_b1h_alignment/PRDM15-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-208/pos_patterns.ENCSR092DCD_ChIP_PRDM15_WTC11_ENCSR239YJA_counts_pattern_0.n_6331-vs-PRDM15-208.alignment counts-znf_b1h_alignment/PRDM15-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-208/pos_patterns.ENCSR092DCD_ChIP_PRDM15_WTC11_ENCSR239YJA_counts_pattern_10.n_20-vs-PRDM15-208.alignment counts-znf_b1h_alignment/PRDM15-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-208/pos_patterns.ENCSR092DCD_ChIP_PRDM15_WTC11_ENCSR239YJA_counts_pattern_1.n_2193-vs-PRDM15-208.alignment counts-znf_b1h_alignment/PRDM15-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-208/pos_patterns.ENCSR092DCD_ChIP_PRDM15_WTC11_ENCSR239YJA_counts_pattern_2.n_841-vs-PRDM15-208.alignment counts-znf_b1h_alignment/PRDM15-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-208/pos_patterns.ENCSR092DCD_ChIP_PRDM15_WTC11_ENCSR239YJA_counts_pattern_3.n_637-vs-PRDM15-208.alignment counts-znf_b1h_alignment/PRDM15-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-208/pos_patterns.ENCSR092DCD_ChIP_PRDM15_WTC11_ENCSR239YJA_counts_pattern_4.n_551-vs-PRDM15-208.alignment counts-znf_b1h_alignment/PRDM15-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-208/pos_patterns.ENCSR092DCD_ChIP_PRDM15_WTC11_ENCSR239YJA_counts_pattern_5.n_370-vs-PRDM15-208.alignment counts-znf_b1h_alignment/PRDM15-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-208/pos_patterns.ENCSR092DCD_ChIP_PRDM15_WTC11_ENCSR239YJA_counts_pattern_6.n_248-vs-PRDM15-208.alignment counts-znf_b1h_alignment/PRDM15-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-208/pos_patterns.ENCSR092DCD_ChIP_PRDM15_WTC11_ENCSR239YJA_counts_pattern_7.n_175-vs-PRDM15-208.alignment counts-znf_b1h_alignment/PRDM15-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-208/pos_patterns.ENCSR092DCD_ChIP_PRDM15_WTC11_ENCSR239YJA_counts_pattern_8.n_126-vs-PRDM15-208.alignment counts-znf_b1h_alignment/PRDM15-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-208/pos_patterns.ENCSR092DCD_ChIP_PRDM15_WTC11_ENCSR239YJA_counts_pattern_9.n_83-vs-PRDM15-208.alignment counts-znf_b1h_alignment/PRDM15-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-208/pos_patterns.ENCSR748SQL_ChIP_PRDM15_GM12878_ENCSR561QKH_counts_pattern_0.n_491-vs-PRDM15-208.alignment counts-znf_b1h_alignment/PRDM15-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-208/pos_patterns.ENCSR748SQL_ChIP_PRDM15_GM12878_ENCSR561QKH_counts_pattern_1.n_121-vs-PRDM15-208.alignment counts-znf_b1h_alignment/PRDM15-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-208/pos_patterns.ENCSR748SQL_ChIP_PRDM15_GM12878_ENCSR561QKH_counts_pattern_2.n_115-vs-PRDM15-208.alignment counts-znf_b1h_alignment/PRDM15-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-208/pos_patterns.ENCSR748SQL_ChIP_PRDM15_GM12878_ENCSR561QKH_counts_pattern_3.n_90-vs-PRDM15-208.alignment counts-znf_b1h_alignment/PRDM15-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-208/pos_patterns.ENCSR748SQL_ChIP_PRDM15_GM12878_ENCSR561QKH_counts_pattern_4.n_44-vs-PRDM15-208.alignment counts-znf_b1h_alignment/PRDM15-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-208/pos_patterns.ENCSR748SQL_ChIP_PRDM15_GM12878_ENCSR561QKH_counts_pattern_5.n_28-vs-PRDM15-208.alignment counts-znf_b1h_alignment/PRDM15-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-212/neg_patterns.ENCSR092DCD_ChIP_PRDM15_WTC11_ENCSR239YJA_counts_pattern_0.n_35-vs-PRDM15-212.alignment counts-znf_b1h_alignment/PRDM15-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-212/neg_patterns.ENCSR092DCD_ChIP_PRDM15_WTC11_ENCSR239YJA_counts_pattern_1.n_30-vs-PRDM15-212.alignment counts-znf_b1h_alignment/PRDM15-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-212/pos_patterns.ENCSR011INW_ChIP_PRDM15_HepG2_ENCSR950RRT_counts_pattern_0.n_2915-vs-PRDM15-212.alignment counts-znf_b1h_alignment/PRDM15-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-212/pos_patterns.ENCSR011INW_ChIP_PRDM15_HepG2_ENCSR950RRT_counts_pattern_10.n_78-vs-PRDM15-212.alignment counts-znf_b1h_alignment/PRDM15-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-212/pos_patterns.ENCSR011INW_ChIP_PRDM15_HepG2_ENCSR950RRT_counts_pattern_11.n_66-vs-PRDM15-212.alignment counts-znf_b1h_alignment/PRDM15-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-212/pos_patterns.ENCSR011INW_ChIP_PRDM15_HepG2_ENCSR950RRT_counts_pattern_12.n_29-vs-PRDM15-212.alignment counts-znf_b1h_alignment/PRDM15-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-212/pos_patterns.ENCSR011INW_ChIP_PRDM15_HepG2_ENCSR950RRT_counts_pattern_13.n_23-vs-PRDM15-212.alignment counts-znf_b1h_alignment/PRDM15-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-212/pos_patterns.ENCSR011INW_ChIP_PRDM15_HepG2_ENCSR950RRT_counts_pattern_1.n_1086-vs-PRDM15-212.alignment counts-znf_b1h_alignment/PRDM15-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-212/pos_patterns.ENCSR011INW_ChIP_PRDM15_HepG2_ENCSR950RRT_counts_pattern_2.n_904-vs-PRDM15-212.alignment counts-znf_b1h_alignment/PRDM15-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-212/pos_patterns.ENCSR011INW_ChIP_PRDM15_HepG2_ENCSR950RRT_counts_pattern_3.n_454-vs-PRDM15-212.alignment counts-znf_b1h_alignment/PRDM15-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-212/pos_patterns.ENCSR011INW_ChIP_PRDM15_HepG2_ENCSR950RRT_counts_pattern_4.n_384-vs-PRDM15-212.alignment counts-znf_b1h_alignment/PRDM15-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-212/pos_patterns.ENCSR011INW_ChIP_PRDM15_HepG2_ENCSR950RRT_counts_pattern_5.n_214-vs-PRDM15-212.alignment counts-znf_b1h_alignment/PRDM15-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-212/pos_patterns.ENCSR011INW_ChIP_PRDM15_HepG2_ENCSR950RRT_counts_pattern_6.n_214-vs-PRDM15-212.alignment counts-znf_b1h_alignment/PRDM15-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-212/pos_patterns.ENCSR011INW_ChIP_PRDM15_HepG2_ENCSR950RRT_counts_pattern_7.n_175-vs-PRDM15-212.alignment counts-znf_b1h_alignment/PRDM15-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-212/pos_patterns.ENCSR011INW_ChIP_PRDM15_HepG2_ENCSR950RRT_counts_pattern_8.n_142-vs-PRDM15-212.alignment counts-znf_b1h_alignment/PRDM15-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-212/pos_patterns.ENCSR011INW_ChIP_PRDM15_HepG2_ENCSR950RRT_counts_pattern_9.n_84-vs-PRDM15-212.alignment counts-znf_b1h_alignment/PRDM15-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-212/pos_patterns.ENCSR092DCD_ChIP_PRDM15_WTC11_ENCSR239YJA_counts_pattern_0.n_6331-vs-PRDM15-212.alignment counts-znf_b1h_alignment/PRDM15-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-212/pos_patterns.ENCSR092DCD_ChIP_PRDM15_WTC11_ENCSR239YJA_counts_pattern_10.n_20-vs-PRDM15-212.alignment counts-znf_b1h_alignment/PRDM15-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-212/pos_patterns.ENCSR092DCD_ChIP_PRDM15_WTC11_ENCSR239YJA_counts_pattern_1.n_2193-vs-PRDM15-212.alignment counts-znf_b1h_alignment/PRDM15-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-212/pos_patterns.ENCSR092DCD_ChIP_PRDM15_WTC11_ENCSR239YJA_counts_pattern_2.n_841-vs-PRDM15-212.alignment counts-znf_b1h_alignment/PRDM15-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-212/pos_patterns.ENCSR092DCD_ChIP_PRDM15_WTC11_ENCSR239YJA_counts_pattern_3.n_637-vs-PRDM15-212.alignment counts-znf_b1h_alignment/PRDM15-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-212/pos_patterns.ENCSR092DCD_ChIP_PRDM15_WTC11_ENCSR239YJA_counts_pattern_4.n_551-vs-PRDM15-212.alignment counts-znf_b1h_alignment/PRDM15-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-212/pos_patterns.ENCSR092DCD_ChIP_PRDM15_WTC11_ENCSR239YJA_counts_pattern_5.n_370-vs-PRDM15-212.alignment counts-znf_b1h_alignment/PRDM15-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-212/pos_patterns.ENCSR092DCD_ChIP_PRDM15_WTC11_ENCSR239YJA_counts_pattern_6.n_248-vs-PRDM15-212.alignment counts-znf_b1h_alignment/PRDM15-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-212/pos_patterns.ENCSR092DCD_ChIP_PRDM15_WTC11_ENCSR239YJA_counts_pattern_7.n_175-vs-PRDM15-212.alignment counts-znf_b1h_alignment/PRDM15-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-212/pos_patterns.ENCSR092DCD_ChIP_PRDM15_WTC11_ENCSR239YJA_counts_pattern_8.n_126-vs-PRDM15-212.alignment counts-znf_b1h_alignment/PRDM15-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-212/pos_patterns.ENCSR092DCD_ChIP_PRDM15_WTC11_ENCSR239YJA_counts_pattern_9.n_83-vs-PRDM15-212.alignment counts-znf_b1h_alignment/PRDM15-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-212/pos_patterns.ENCSR748SQL_ChIP_PRDM15_GM12878_ENCSR561QKH_counts_pattern_0.n_491-vs-PRDM15-212.alignment counts-znf_b1h_alignment/PRDM15-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-212/pos_patterns.ENCSR748SQL_ChIP_PRDM15_GM12878_ENCSR561QKH_counts_pattern_1.n_121-vs-PRDM15-212.alignment counts-znf_b1h_alignment/PRDM15-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-212/pos_patterns.ENCSR748SQL_ChIP_PRDM15_GM12878_ENCSR561QKH_counts_pattern_2.n_115-vs-PRDM15-212.alignment counts-znf_b1h_alignment/PRDM15-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-212/pos_patterns.ENCSR748SQL_ChIP_PRDM15_GM12878_ENCSR561QKH_counts_pattern_3.n_90-vs-PRDM15-212.alignment counts-znf_b1h_alignment/PRDM15-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-212/pos_patterns.ENCSR748SQL_ChIP_PRDM15_GM12878_ENCSR561QKH_counts_pattern_4.n_44-vs-PRDM15-212.alignment counts-znf_b1h_alignment/PRDM15-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM15-212/pos_patterns.ENCSR748SQL_ChIP_PRDM15_GM12878_ENCSR561QKH_counts_pattern_5.n_28-vs-PRDM15-212.alignment counts-znf_b1h_alignment/PRDM15-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM2-201/pos_patterns.ENCSR714LYA_ChIP_PRDM2_HEK293_ENCSR543JMF_counts_pattern_0.n_477-vs-PRDM2-201.alignment counts-znf_b1h_alignment/PRDM2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM2-201/pos_patterns.ENCSR714LYA_ChIP_PRDM2_HEK293_ENCSR543JMF_counts_pattern_1.n_258-vs-PRDM2-201.alignment counts-znf_b1h_alignment/PRDM2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM2-201/pos_patterns.ENCSR714LYA_ChIP_PRDM2_HEK293_ENCSR543JMF_counts_pattern_2.n_116-vs-PRDM2-201.alignment counts-znf_b1h_alignment/PRDM2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM2-201/pos_patterns.ENCSR714LYA_ChIP_PRDM2_HEK293_ENCSR543JMF_counts_pattern_3.n_94-vs-PRDM2-201.alignment counts-znf_b1h_alignment/PRDM2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM2-201/pos_patterns.ENCSR714LYA_ChIP_PRDM2_HEK293_ENCSR543JMF_counts_pattern_4.n_90-vs-PRDM2-201.alignment counts-znf_b1h_alignment/PRDM2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM2-201/pos_patterns.ENCSR714LYA_ChIP_PRDM2_HEK293_ENCSR543JMF_counts_pattern_5.n_79-vs-PRDM2-201.alignment counts-znf_b1h_alignment/PRDM2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM2-201/pos_patterns.ENCSR714LYA_ChIP_PRDM2_HEK293_ENCSR543JMF_counts_pattern_6.n_77-vs-PRDM2-201.alignment counts-znf_b1h_alignment/PRDM2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM2-201/pos_patterns.ENCSR714LYA_ChIP_PRDM2_HEK293_ENCSR543JMF_counts_pattern_7.n_75-vs-PRDM2-201.alignment counts-znf_b1h_alignment/PRDM2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM2-201/pos_patterns.ENCSR714LYA_ChIP_PRDM2_HEK293_ENCSR543JMF_counts_pattern_8.n_73-vs-PRDM2-201.alignment counts-znf_b1h_alignment/PRDM2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM2-201/pos_patterns.ENCSR714LYA_ChIP_PRDM2_HEK293_ENCSR543JMF_counts_pattern_9.n_55-vs-PRDM2-201.alignment counts-znf_b1h_alignment/PRDM2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-201/neg_patterns.ENCSR130NZQ_ChIP_PRDM4_HepG2_ENCSR121ILL_counts_pattern_0.n_44-vs-PRDM4-201.alignment counts-znf_b1h_alignment/PRDM4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-201/neg_patterns.ENCSR130NZQ_ChIP_PRDM4_HepG2_ENCSR121ILL_counts_pattern_1.n_41-vs-PRDM4-201.alignment counts-znf_b1h_alignment/PRDM4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-201/neg_patterns.ENCSR130NZQ_ChIP_PRDM4_HepG2_ENCSR121ILL_counts_pattern_2.n_31-vs-PRDM4-201.alignment counts-znf_b1h_alignment/PRDM4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-201/pos_patterns.ENCSR130NZQ_ChIP_PRDM4_HepG2_ENCSR121ILL_counts_pattern_0.n_376-vs-PRDM4-201.alignment counts-znf_b1h_alignment/PRDM4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-201/pos_patterns.ENCSR130NZQ_ChIP_PRDM4_HepG2_ENCSR121ILL_counts_pattern_10.n_75-vs-PRDM4-201.alignment counts-znf_b1h_alignment/PRDM4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-201/pos_patterns.ENCSR130NZQ_ChIP_PRDM4_HepG2_ENCSR121ILL_counts_pattern_11.n_74-vs-PRDM4-201.alignment counts-znf_b1h_alignment/PRDM4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-201/pos_patterns.ENCSR130NZQ_ChIP_PRDM4_HepG2_ENCSR121ILL_counts_pattern_12.n_70-vs-PRDM4-201.alignment counts-znf_b1h_alignment/PRDM4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-201/pos_patterns.ENCSR130NZQ_ChIP_PRDM4_HepG2_ENCSR121ILL_counts_pattern_13.n_68-vs-PRDM4-201.alignment counts-znf_b1h_alignment/PRDM4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-201/pos_patterns.ENCSR130NZQ_ChIP_PRDM4_HepG2_ENCSR121ILL_counts_pattern_14.n_48-vs-PRDM4-201.alignment counts-znf_b1h_alignment/PRDM4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-201/pos_patterns.ENCSR130NZQ_ChIP_PRDM4_HepG2_ENCSR121ILL_counts_pattern_15.n_42-vs-PRDM4-201.alignment counts-znf_b1h_alignment/PRDM4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-201/pos_patterns.ENCSR130NZQ_ChIP_PRDM4_HepG2_ENCSR121ILL_counts_pattern_16.n_29-vs-PRDM4-201.alignment counts-znf_b1h_alignment/PRDM4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-201/pos_patterns.ENCSR130NZQ_ChIP_PRDM4_HepG2_ENCSR121ILL_counts_pattern_17.n_20-vs-PRDM4-201.alignment counts-znf_b1h_alignment/PRDM4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-201/pos_patterns.ENCSR130NZQ_ChIP_PRDM4_HepG2_ENCSR121ILL_counts_pattern_1.n_361-vs-PRDM4-201.alignment counts-znf_b1h_alignment/PRDM4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-201/pos_patterns.ENCSR130NZQ_ChIP_PRDM4_HepG2_ENCSR121ILL_counts_pattern_2.n_355-vs-PRDM4-201.alignment counts-znf_b1h_alignment/PRDM4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-201/pos_patterns.ENCSR130NZQ_ChIP_PRDM4_HepG2_ENCSR121ILL_counts_pattern_3.n_234-vs-PRDM4-201.alignment counts-znf_b1h_alignment/PRDM4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-201/pos_patterns.ENCSR130NZQ_ChIP_PRDM4_HepG2_ENCSR121ILL_counts_pattern_4.n_124-vs-PRDM4-201.alignment counts-znf_b1h_alignment/PRDM4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-201/pos_patterns.ENCSR130NZQ_ChIP_PRDM4_HepG2_ENCSR121ILL_counts_pattern_5.n_106-vs-PRDM4-201.alignment counts-znf_b1h_alignment/PRDM4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-201/pos_patterns.ENCSR130NZQ_ChIP_PRDM4_HepG2_ENCSR121ILL_counts_pattern_6.n_99-vs-PRDM4-201.alignment counts-znf_b1h_alignment/PRDM4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-201/pos_patterns.ENCSR130NZQ_ChIP_PRDM4_HepG2_ENCSR121ILL_counts_pattern_7.n_91-vs-PRDM4-201.alignment counts-znf_b1h_alignment/PRDM4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-201/pos_patterns.ENCSR130NZQ_ChIP_PRDM4_HepG2_ENCSR121ILL_counts_pattern_8.n_86-vs-PRDM4-201.alignment counts-znf_b1h_alignment/PRDM4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-201/pos_patterns.ENCSR130NZQ_ChIP_PRDM4_HepG2_ENCSR121ILL_counts_pattern_9.n_78-vs-PRDM4-201.alignment counts-znf_b1h_alignment/PRDM4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-201/pos_patterns.ENCSR443MVV_ChIP_PRDM4_HEK293_ENCSR592KSS_counts_pattern_0.n_8652-vs-PRDM4-201.alignment counts-znf_b1h_alignment/PRDM4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-201/pos_patterns.ENCSR443MVV_ChIP_PRDM4_HEK293_ENCSR592KSS_counts_pattern_1.n_2007-vs-PRDM4-201.alignment counts-znf_b1h_alignment/PRDM4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-201/pos_patterns.ENCSR443MVV_ChIP_PRDM4_HEK293_ENCSR592KSS_counts_pattern_2.n_114-vs-PRDM4-201.alignment counts-znf_b1h_alignment/PRDM4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-201/pos_patterns.ENCSR443MVV_ChIP_PRDM4_HEK293_ENCSR592KSS_counts_pattern_3.n_102-vs-PRDM4-201.alignment counts-znf_b1h_alignment/PRDM4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-201/pos_patterns.ENCSR443MVV_ChIP_PRDM4_HEK293_ENCSR592KSS_counts_pattern_4.n_85-vs-PRDM4-201.alignment counts-znf_b1h_alignment/PRDM4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-205/neg_patterns.ENCSR130NZQ_ChIP_PRDM4_HepG2_ENCSR121ILL_counts_pattern_0.n_44-vs-PRDM4-205.alignment counts-znf_b1h_alignment/PRDM4-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-205/neg_patterns.ENCSR130NZQ_ChIP_PRDM4_HepG2_ENCSR121ILL_counts_pattern_1.n_41-vs-PRDM4-205.alignment counts-znf_b1h_alignment/PRDM4-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-205/neg_patterns.ENCSR130NZQ_ChIP_PRDM4_HepG2_ENCSR121ILL_counts_pattern_2.n_31-vs-PRDM4-205.alignment counts-znf_b1h_alignment/PRDM4-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-205/pos_patterns.ENCSR130NZQ_ChIP_PRDM4_HepG2_ENCSR121ILL_counts_pattern_0.n_376-vs-PRDM4-205.alignment counts-znf_b1h_alignment/PRDM4-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-205/pos_patterns.ENCSR130NZQ_ChIP_PRDM4_HepG2_ENCSR121ILL_counts_pattern_10.n_75-vs-PRDM4-205.alignment counts-znf_b1h_alignment/PRDM4-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-205/pos_patterns.ENCSR130NZQ_ChIP_PRDM4_HepG2_ENCSR121ILL_counts_pattern_11.n_74-vs-PRDM4-205.alignment counts-znf_b1h_alignment/PRDM4-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-205/pos_patterns.ENCSR130NZQ_ChIP_PRDM4_HepG2_ENCSR121ILL_counts_pattern_12.n_70-vs-PRDM4-205.alignment counts-znf_b1h_alignment/PRDM4-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-205/pos_patterns.ENCSR130NZQ_ChIP_PRDM4_HepG2_ENCSR121ILL_counts_pattern_13.n_68-vs-PRDM4-205.alignment counts-znf_b1h_alignment/PRDM4-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-205/pos_patterns.ENCSR130NZQ_ChIP_PRDM4_HepG2_ENCSR121ILL_counts_pattern_14.n_48-vs-PRDM4-205.alignment counts-znf_b1h_alignment/PRDM4-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-205/pos_patterns.ENCSR130NZQ_ChIP_PRDM4_HepG2_ENCSR121ILL_counts_pattern_15.n_42-vs-PRDM4-205.alignment counts-znf_b1h_alignment/PRDM4-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-205/pos_patterns.ENCSR130NZQ_ChIP_PRDM4_HepG2_ENCSR121ILL_counts_pattern_16.n_29-vs-PRDM4-205.alignment counts-znf_b1h_alignment/PRDM4-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-205/pos_patterns.ENCSR130NZQ_ChIP_PRDM4_HepG2_ENCSR121ILL_counts_pattern_17.n_20-vs-PRDM4-205.alignment counts-znf_b1h_alignment/PRDM4-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-205/pos_patterns.ENCSR130NZQ_ChIP_PRDM4_HepG2_ENCSR121ILL_counts_pattern_1.n_361-vs-PRDM4-205.alignment counts-znf_b1h_alignment/PRDM4-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-205/pos_patterns.ENCSR130NZQ_ChIP_PRDM4_HepG2_ENCSR121ILL_counts_pattern_2.n_355-vs-PRDM4-205.alignment counts-znf_b1h_alignment/PRDM4-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-205/pos_patterns.ENCSR130NZQ_ChIP_PRDM4_HepG2_ENCSR121ILL_counts_pattern_3.n_234-vs-PRDM4-205.alignment counts-znf_b1h_alignment/PRDM4-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-205/pos_patterns.ENCSR130NZQ_ChIP_PRDM4_HepG2_ENCSR121ILL_counts_pattern_4.n_124-vs-PRDM4-205.alignment counts-znf_b1h_alignment/PRDM4-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-205/pos_patterns.ENCSR130NZQ_ChIP_PRDM4_HepG2_ENCSR121ILL_counts_pattern_5.n_106-vs-PRDM4-205.alignment counts-znf_b1h_alignment/PRDM4-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-205/pos_patterns.ENCSR130NZQ_ChIP_PRDM4_HepG2_ENCSR121ILL_counts_pattern_6.n_99-vs-PRDM4-205.alignment counts-znf_b1h_alignment/PRDM4-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-205/pos_patterns.ENCSR130NZQ_ChIP_PRDM4_HepG2_ENCSR121ILL_counts_pattern_7.n_91-vs-PRDM4-205.alignment counts-znf_b1h_alignment/PRDM4-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-205/pos_patterns.ENCSR130NZQ_ChIP_PRDM4_HepG2_ENCSR121ILL_counts_pattern_8.n_86-vs-PRDM4-205.alignment counts-znf_b1h_alignment/PRDM4-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-205/pos_patterns.ENCSR130NZQ_ChIP_PRDM4_HepG2_ENCSR121ILL_counts_pattern_9.n_78-vs-PRDM4-205.alignment counts-znf_b1h_alignment/PRDM4-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-205/pos_patterns.ENCSR443MVV_ChIP_PRDM4_HEK293_ENCSR592KSS_counts_pattern_0.n_8652-vs-PRDM4-205.alignment counts-znf_b1h_alignment/PRDM4-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-205/pos_patterns.ENCSR443MVV_ChIP_PRDM4_HEK293_ENCSR592KSS_counts_pattern_1.n_2007-vs-PRDM4-205.alignment counts-znf_b1h_alignment/PRDM4-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-205/pos_patterns.ENCSR443MVV_ChIP_PRDM4_HEK293_ENCSR592KSS_counts_pattern_2.n_114-vs-PRDM4-205.alignment counts-znf_b1h_alignment/PRDM4-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-205/pos_patterns.ENCSR443MVV_ChIP_PRDM4_HEK293_ENCSR592KSS_counts_pattern_3.n_102-vs-PRDM4-205.alignment counts-znf_b1h_alignment/PRDM4-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM4-205/pos_patterns.ENCSR443MVV_ChIP_PRDM4_HEK293_ENCSR592KSS_counts_pattern_4.n_85-vs-PRDM4-205.alignment counts-znf_b1h_alignment/PRDM4-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM9-201/ChipExo_models_PRDM9_counts-pos.pattern_0.n_2502-vs-PRDM9-201.alignment counts-znf_b1h_alignment/PRDM9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM9-201/ChipExo_models_PRDM9_counts-pos.pattern_1.n_390-vs-PRDM9-201.alignment counts-znf_b1h_alignment/PRDM9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM9-201/ChipExo_models_PRDM9_counts-pos.pattern_2.n_148-vs-PRDM9-201.alignment counts-znf_b1h_alignment/PRDM9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM9-201/ChipExo_models_PRDM9_counts-pos.pattern_3.n_81-vs-PRDM9-201.alignment counts-znf_b1h_alignment/PRDM9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM9-201/ChipExo_models_PRDM9_counts-pos.pattern_4.n_47-vs-PRDM9-201.alignment counts-znf_b1h_alignment/PRDM9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/PRDM9-201/ChipExo_models_PRDM9_counts-pos.pattern_5.n_46-vs-PRDM9-201.alignment counts-znf_b1h_alignment/PRDM9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RBAK-201/ChipExo_models_RBAK_counts-pos.pattern_0.n_425-vs-RBAK-201.alignment counts-znf_b1h_alignment/RBAK-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RBAK-201/ChipExo_models_RBAK_counts-pos.pattern_1.n_258-vs-RBAK-201.alignment counts-znf_b1h_alignment/RBAK-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RBAK-201/ChipExo_models_RBAK_counts-pos.pattern_2.n_185-vs-RBAK-201.alignment counts-znf_b1h_alignment/RBAK-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RBAK-201/ChipExo_models_RBAK_counts-pos.pattern_3.n_136-vs-RBAK-201.alignment counts-znf_b1h_alignment/RBAK-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RBAK-201/ChipExo_models_RBAK_counts-pos.pattern_4.n_64-vs-RBAK-201.alignment counts-znf_b1h_alignment/RBAK-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RBAK-201/ChipExo_models_RBAK_counts-pos.pattern_5.n_38-vs-RBAK-201.alignment counts-znf_b1h_alignment/RBAK-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RBAK-201/neg_patterns.ENCSR144NTH_ChIP_RBAK_HepG2_ENCSR796ANQ_counts_pattern_0.n_41-vs-RBAK-201.alignment counts-znf_b1h_alignment/RBAK-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RBAK-201/neg_patterns.ENCSR144NTH_ChIP_RBAK_HepG2_ENCSR796ANQ_counts_pattern_1.n_41-vs-RBAK-201.alignment counts-znf_b1h_alignment/RBAK-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RBAK-201/neg_patterns.ENCSR144NTH_ChIP_RBAK_HepG2_ENCSR796ANQ_counts_pattern_2.n_40-vs-RBAK-201.alignment counts-znf_b1h_alignment/RBAK-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RBAK-201/neg_patterns.ENCSR144NTH_ChIP_RBAK_HepG2_ENCSR796ANQ_counts_pattern_3.n_38-vs-RBAK-201.alignment counts-znf_b1h_alignment/RBAK-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RBAK-201/pos_patterns.ENCSR144NTH_ChIP_RBAK_HepG2_ENCSR796ANQ_counts_pattern_0.n_1987-vs-RBAK-201.alignment counts-znf_b1h_alignment/RBAK-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RBAK-201/pos_patterns.ENCSR144NTH_ChIP_RBAK_HepG2_ENCSR796ANQ_counts_pattern_10.n_33-vs-RBAK-201.alignment counts-znf_b1h_alignment/RBAK-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RBAK-201/pos_patterns.ENCSR144NTH_ChIP_RBAK_HepG2_ENCSR796ANQ_counts_pattern_1.n_843-vs-RBAK-201.alignment counts-znf_b1h_alignment/RBAK-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RBAK-201/pos_patterns.ENCSR144NTH_ChIP_RBAK_HepG2_ENCSR796ANQ_counts_pattern_2.n_341-vs-RBAK-201.alignment counts-znf_b1h_alignment/RBAK-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RBAK-201/pos_patterns.ENCSR144NTH_ChIP_RBAK_HepG2_ENCSR796ANQ_counts_pattern_3.n_311-vs-RBAK-201.alignment counts-znf_b1h_alignment/RBAK-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RBAK-201/pos_patterns.ENCSR144NTH_ChIP_RBAK_HepG2_ENCSR796ANQ_counts_pattern_4.n_180-vs-RBAK-201.alignment counts-znf_b1h_alignment/RBAK-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RBAK-201/pos_patterns.ENCSR144NTH_ChIP_RBAK_HepG2_ENCSR796ANQ_counts_pattern_5.n_172-vs-RBAK-201.alignment counts-znf_b1h_alignment/RBAK-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RBAK-201/pos_patterns.ENCSR144NTH_ChIP_RBAK_HepG2_ENCSR796ANQ_counts_pattern_6.n_142-vs-RBAK-201.alignment counts-znf_b1h_alignment/RBAK-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RBAK-201/pos_patterns.ENCSR144NTH_ChIP_RBAK_HepG2_ENCSR796ANQ_counts_pattern_7.n_124-vs-RBAK-201.alignment counts-znf_b1h_alignment/RBAK-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RBAK-201/pos_patterns.ENCSR144NTH_ChIP_RBAK_HepG2_ENCSR796ANQ_counts_pattern_8.n_102-vs-RBAK-201.alignment counts-znf_b1h_alignment/RBAK-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RBAK-201/pos_patterns.ENCSR144NTH_ChIP_RBAK_HepG2_ENCSR796ANQ_counts_pattern_9.n_87-vs-RBAK-201.alignment counts-znf_b1h_alignment/RBAK-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RBAK-201/pos_patterns.ENCSR441UBA_ChIP_RBAK_HEK293_ENCSR748UHS_counts_pattern_0.n_998-vs-RBAK-201.alignment counts-znf_b1h_alignment/RBAK-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RBAK-201/pos_patterns.ENCSR441UBA_ChIP_RBAK_HEK293_ENCSR748UHS_counts_pattern_10.n_31-vs-RBAK-201.alignment counts-znf_b1h_alignment/RBAK-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RBAK-201/pos_patterns.ENCSR441UBA_ChIP_RBAK_HEK293_ENCSR748UHS_counts_pattern_11.n_22-vs-RBAK-201.alignment counts-znf_b1h_alignment/RBAK-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RBAK-201/pos_patterns.ENCSR441UBA_ChIP_RBAK_HEK293_ENCSR748UHS_counts_pattern_1.n_526-vs-RBAK-201.alignment counts-znf_b1h_alignment/RBAK-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RBAK-201/pos_patterns.ENCSR441UBA_ChIP_RBAK_HEK293_ENCSR748UHS_counts_pattern_2.n_338-vs-RBAK-201.alignment counts-znf_b1h_alignment/RBAK-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RBAK-201/pos_patterns.ENCSR441UBA_ChIP_RBAK_HEK293_ENCSR748UHS_counts_pattern_3.n_322-vs-RBAK-201.alignment counts-znf_b1h_alignment/RBAK-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RBAK-201/pos_patterns.ENCSR441UBA_ChIP_RBAK_HEK293_ENCSR748UHS_counts_pattern_4.n_181-vs-RBAK-201.alignment counts-znf_b1h_alignment/RBAK-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RBAK-201/pos_patterns.ENCSR441UBA_ChIP_RBAK_HEK293_ENCSR748UHS_counts_pattern_5.n_178-vs-RBAK-201.alignment counts-znf_b1h_alignment/RBAK-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RBAK-201/pos_patterns.ENCSR441UBA_ChIP_RBAK_HEK293_ENCSR748UHS_counts_pattern_6.n_161-vs-RBAK-201.alignment counts-znf_b1h_alignment/RBAK-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RBAK-201/pos_patterns.ENCSR441UBA_ChIP_RBAK_HEK293_ENCSR748UHS_counts_pattern_7.n_87-vs-RBAK-201.alignment counts-znf_b1h_alignment/RBAK-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RBAK-201/pos_patterns.ENCSR441UBA_ChIP_RBAK_HEK293_ENCSR748UHS_counts_pattern_8.n_32-vs-RBAK-201.alignment counts-znf_b1h_alignment/RBAK-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RBAK-201/pos_patterns.ENCSR441UBA_ChIP_RBAK_HEK293_ENCSR748UHS_counts_pattern_9.n_32-vs-RBAK-201.alignment counts-znf_b1h_alignment/RBAK-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_counts_pattern_0.n_245-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_counts_pattern_10.n_26-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_counts_pattern_11.n_23-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_counts_pattern_12.n_23-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_counts_pattern_13.n_22-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_counts_pattern_14.n_20-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_counts_pattern_15.n_20-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_counts_pattern_1.n_54-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_counts_pattern_2.n_52-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_counts_pattern_3.n_50-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_counts_pattern_4.n_44-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_counts_pattern_5.n_42-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_counts_pattern_6.n_42-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_counts_pattern_7.n_34-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_counts_pattern_8.n_31-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_counts_pattern_9.n_25-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BGF_ChIP_REST_GM12878_ENCSR784NGD_counts_pattern_0.n_41-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BGF_ChIP_REST_GM12878_ENCSR784NGD_counts_pattern_1.n_24-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_counts_pattern_0.n_48-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_counts_pattern_1.n_43-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_counts_pattern_2.n_38-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_counts_pattern_3.n_34-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_counts_pattern_4.n_20-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BJP_ChIP_REST_PFSK-1_ENCSR811WIG_counts_pattern_0.n_33-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BJP_ChIP_REST_PFSK-1_ENCSR811WIG_counts_pattern_1.n_23-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BMN_ChIP_REST_HeLa-S3_ENCSR673YCJ_counts_pattern_0.n_53-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BMN_ChIP_REST_HeLa-S3_ENCSR673YCJ_counts_pattern_1.n_43-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BMN_ChIP_REST_HeLa-S3_ENCSR673YCJ_counts_pattern_2.n_33-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_counts_pattern_0.n_35-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_counts_pattern_1.n_31-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_counts_pattern_2.n_31-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_counts_pattern_3.n_29-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_counts_pattern_4.n_24-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_counts_pattern_5.n_21-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_counts_pattern_0.n_30-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_counts_pattern_1.n_25-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BOX_ChIP_REST_PFSK-1_ENCSR229LTB_counts_pattern_0.n_43-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BOX_ChIP_REST_PFSK-1_ENCSR229LTB_counts_pattern_1.n_40-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BOX_ChIP_REST_PFSK-1_ENCSR229LTB_counts_pattern_2.n_32-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BOX_ChIP_REST_PFSK-1_ENCSR229LTB_counts_pattern_3.n_27-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BOX_ChIP_REST_PFSK-1_ENCSR229LTB_counts_pattern_4.n_25-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_counts_pattern_0.n_47-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_counts_pattern_10.n_22-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_counts_pattern_11.n_21-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_counts_pattern_1.n_34-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_counts_pattern_2.n_31-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_counts_pattern_3.n_27-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_counts_pattern_4.n_27-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_counts_pattern_5.n_26-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_counts_pattern_6.n_25-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_counts_pattern_7.n_24-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_counts_pattern_8.n_23-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_counts_pattern_9.n_23-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BSP_ChIP_REST_MCF-7_ENCSR640PXF_counts_pattern_0.n_74-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BSP_ChIP_REST_MCF-7_ENCSR640PXF_counts_pattern_1.n_30-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BSP_ChIP_REST_MCF-7_ENCSR640PXF_counts_pattern_2.n_27-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BSP_ChIP_REST_MCF-7_ENCSR640PXF_counts_pattern_3.n_27-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BSP_ChIP_REST_MCF-7_ENCSR640PXF_counts_pattern_4.n_24-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BSP_ChIP_REST_MCF-7_ENCSR640PXF_counts_pattern_5.n_22-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BSP_ChIP_REST_MCF-7_ENCSR640PXF_counts_pattern_6.n_21-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BTF_ChIP_REST_HL-60_ENCSR900KSB_counts_pattern_0.n_39-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BUU_ChIP_REST_Ishikawa_ENCSR174BCS_counts_pattern_0.n_28-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR054JMQ_ChIP_REST_K562_ENCSR759WXZ_counts_pattern_0.n_747-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR054JMQ_ChIP_REST_K562_ENCSR759WXZ_counts_pattern_1.n_87-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR054JMQ_ChIP_REST_K562_ENCSR759WXZ_counts_pattern_2.n_36-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR054JMQ_ChIP_REST_K562_ENCSR759WXZ_counts_pattern_3.n_27-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR054JMQ_ChIP_REST_K562_ENCSR759WXZ_counts_pattern_4.n_22-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_counts_pattern_0.n_67-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_counts_pattern_1.n_49-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_counts_pattern_2.n_22-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_counts_pattern_3.n_21-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_counts_pattern_4.n_21-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR663WAR_ChIP_REST_H1_ENCSR296LFF_counts_pattern_0.n_34-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR663WAR_ChIP_REST_H1_ENCSR296LFF_counts_pattern_1.n_29-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR663WAR_ChIP_REST_H1_ENCSR296LFF_counts_pattern_2.n_28-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR663WAR_ChIP_REST_H1_ENCSR296LFF_counts_pattern_3.n_24-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR663WAR_ChIP_REST_H1_ENCSR296LFF_counts_pattern_4.n_22-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_counts_pattern_0.n_48-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_counts_pattern_1.n_20-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR871KYB_ChIP_REST_GM23338_ENCSR543TOL_counts_pattern_0.n_40-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR893QWP_ChIP_REST_liver_ENCSR314BIS_counts_pattern_0.n_28-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR893QWP_ChIP_REST_liver_ENCSR314BIS_counts_pattern_1.n_27-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR893QWP_ChIP_REST_liver_ENCSR314BIS_counts_pattern_2.n_25-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR893QWP_ChIP_REST_liver_ENCSR314BIS_counts_pattern_3.n_24-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR893QWP_ChIP_REST_liver_ENCSR314BIS_counts_pattern_4.n_22-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR893QWP_ChIP_REST_liver_ENCSR314BIS_counts_pattern_5.n_22-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_counts_pattern_0.n_36-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/neg_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_counts_pattern_1.n_23-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_counts_pattern_0.n_2943-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_counts_pattern_10.n_45-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_counts_pattern_11.n_45-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_counts_pattern_12.n_30-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_counts_pattern_13.n_28-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_counts_pattern_14.n_27-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_counts_pattern_15.n_23-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_counts_pattern_1.n_2285-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_counts_pattern_2.n_1687-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_counts_pattern_3.n_576-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_counts_pattern_4.n_536-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_counts_pattern_5.n_209-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_counts_pattern_6.n_148-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_counts_pattern_7.n_84-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_counts_pattern_8.n_78-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_counts_pattern_9.n_66-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BGF_ChIP_REST_GM12878_ENCSR784NGD_counts_pattern_0.n_2745-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BGF_ChIP_REST_GM12878_ENCSR784NGD_counts_pattern_10.n_28-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BGF_ChIP_REST_GM12878_ENCSR784NGD_counts_pattern_11.n_20-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BGF_ChIP_REST_GM12878_ENCSR784NGD_counts_pattern_1.n_1178-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BGF_ChIP_REST_GM12878_ENCSR784NGD_counts_pattern_2.n_746-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BGF_ChIP_REST_GM12878_ENCSR784NGD_counts_pattern_3.n_205-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BGF_ChIP_REST_GM12878_ENCSR784NGD_counts_pattern_4.n_193-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BGF_ChIP_REST_GM12878_ENCSR784NGD_counts_pattern_5.n_101-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BGF_ChIP_REST_GM12878_ENCSR784NGD_counts_pattern_6.n_73-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BGF_ChIP_REST_GM12878_ENCSR784NGD_counts_pattern_7.n_64-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BGF_ChIP_REST_GM12878_ENCSR784NGD_counts_pattern_8.n_47-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BGF_ChIP_REST_GM12878_ENCSR784NGD_counts_pattern_9.n_37-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_counts_pattern_0.n_6416-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_counts_pattern_10.n_46-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_counts_pattern_11.n_39-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_counts_pattern_12.n_35-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_counts_pattern_13.n_33-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_counts_pattern_14.n_31-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_counts_pattern_15.n_23-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_counts_pattern_16.n_20-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_counts_pattern_1.n_3671-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_counts_pattern_2.n_1248-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_counts_pattern_3.n_560-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_counts_pattern_4.n_406-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_counts_pattern_5.n_249-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_counts_pattern_6.n_178-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_counts_pattern_7.n_119-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_counts_pattern_8.n_77-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_counts_pattern_9.n_51-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJJ_ChIP_REST_SK-N-SH_ENCSR468KZB_counts_pattern_0.n_1535-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJJ_ChIP_REST_SK-N-SH_ENCSR468KZB_counts_pattern_10.n_50-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJJ_ChIP_REST_SK-N-SH_ENCSR468KZB_counts_pattern_11.n_30-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJJ_ChIP_REST_SK-N-SH_ENCSR468KZB_counts_pattern_12.n_23-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJJ_ChIP_REST_SK-N-SH_ENCSR468KZB_counts_pattern_1.n_665-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJJ_ChIP_REST_SK-N-SH_ENCSR468KZB_counts_pattern_2.n_373-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJJ_ChIP_REST_SK-N-SH_ENCSR468KZB_counts_pattern_3.n_264-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJJ_ChIP_REST_SK-N-SH_ENCSR468KZB_counts_pattern_4.n_218-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJJ_ChIP_REST_SK-N-SH_ENCSR468KZB_counts_pattern_5.n_148-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJJ_ChIP_REST_SK-N-SH_ENCSR468KZB_counts_pattern_6.n_145-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJJ_ChIP_REST_SK-N-SH_ENCSR468KZB_counts_pattern_7.n_136-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJJ_ChIP_REST_SK-N-SH_ENCSR468KZB_counts_pattern_8.n_92-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJJ_ChIP_REST_SK-N-SH_ENCSR468KZB_counts_pattern_9.n_68-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJL_ChIP_REST_HepG2_ENCSR596AXW_counts_pattern_0.n_1746-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJL_ChIP_REST_HepG2_ENCSR596AXW_counts_pattern_1.n_976-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJL_ChIP_REST_HepG2_ENCSR596AXW_counts_pattern_2.n_202-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJL_ChIP_REST_HepG2_ENCSR596AXW_counts_pattern_3.n_170-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJL_ChIP_REST_HepG2_ENCSR596AXW_counts_pattern_4.n_37-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJL_ChIP_REST_HepG2_ENCSR596AXW_counts_pattern_5.n_32-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJL_ChIP_REST_HepG2_ENCSR596AXW_counts_pattern_6.n_25-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJL_ChIP_REST_HepG2_ENCSR596AXW_counts_pattern_7.n_22-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJO_ChIP_REST_Panc1_ENCSR862SMK_counts_pattern_0.n_2142-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJO_ChIP_REST_Panc1_ENCSR862SMK_counts_pattern_10.n_34-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJO_ChIP_REST_Panc1_ENCSR862SMK_counts_pattern_11.n_29-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJO_ChIP_REST_Panc1_ENCSR862SMK_counts_pattern_12.n_21-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJO_ChIP_REST_Panc1_ENCSR862SMK_counts_pattern_1.n_1112-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJO_ChIP_REST_Panc1_ENCSR862SMK_counts_pattern_2.n_173-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJO_ChIP_REST_Panc1_ENCSR862SMK_counts_pattern_3.n_169-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJO_ChIP_REST_Panc1_ENCSR862SMK_counts_pattern_4.n_154-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJO_ChIP_REST_Panc1_ENCSR862SMK_counts_pattern_5.n_103-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJO_ChIP_REST_Panc1_ENCSR862SMK_counts_pattern_6.n_102-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJO_ChIP_REST_Panc1_ENCSR862SMK_counts_pattern_7.n_50-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJO_ChIP_REST_Panc1_ENCSR862SMK_counts_pattern_8.n_41-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJO_ChIP_REST_Panc1_ENCSR862SMK_counts_pattern_9.n_40-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJP_ChIP_REST_PFSK-1_ENCSR811WIG_counts_pattern_0.n_1540-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJP_ChIP_REST_PFSK-1_ENCSR811WIG_counts_pattern_10.n_63-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJP_ChIP_REST_PFSK-1_ENCSR811WIG_counts_pattern_11.n_52-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJP_ChIP_REST_PFSK-1_ENCSR811WIG_counts_pattern_12.n_51-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJP_ChIP_REST_PFSK-1_ENCSR811WIG_counts_pattern_13.n_50-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJP_ChIP_REST_PFSK-1_ENCSR811WIG_counts_pattern_14.n_32-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJP_ChIP_REST_PFSK-1_ENCSR811WIG_counts_pattern_15.n_32-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJP_ChIP_REST_PFSK-1_ENCSR811WIG_counts_pattern_16.n_28-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJP_ChIP_REST_PFSK-1_ENCSR811WIG_counts_pattern_17.n_27-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJP_ChIP_REST_PFSK-1_ENCSR811WIG_counts_pattern_18.n_25-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJP_ChIP_REST_PFSK-1_ENCSR811WIG_counts_pattern_1.n_1206-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJP_ChIP_REST_PFSK-1_ENCSR811WIG_counts_pattern_2.n_1110-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJP_ChIP_REST_PFSK-1_ENCSR811WIG_counts_pattern_3.n_394-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJP_ChIP_REST_PFSK-1_ENCSR811WIG_counts_pattern_4.n_162-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJP_ChIP_REST_PFSK-1_ENCSR811WIG_counts_pattern_5.n_110-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJP_ChIP_REST_PFSK-1_ENCSR811WIG_counts_pattern_6.n_94-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJP_ChIP_REST_PFSK-1_ENCSR811WIG_counts_pattern_7.n_90-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJP_ChIP_REST_PFSK-1_ENCSR811WIG_counts_pattern_8.n_75-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJP_ChIP_REST_PFSK-1_ENCSR811WIG_counts_pattern_9.n_69-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMN_ChIP_REST_HeLa-S3_ENCSR673YCJ_counts_pattern_0.n_2975-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMN_ChIP_REST_HeLa-S3_ENCSR673YCJ_counts_pattern_10.n_110-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMN_ChIP_REST_HeLa-S3_ENCSR673YCJ_counts_pattern_11.n_106-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMN_ChIP_REST_HeLa-S3_ENCSR673YCJ_counts_pattern_12.n_103-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMN_ChIP_REST_HeLa-S3_ENCSR673YCJ_counts_pattern_13.n_101-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMN_ChIP_REST_HeLa-S3_ENCSR673YCJ_counts_pattern_14.n_76-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMN_ChIP_REST_HeLa-S3_ENCSR673YCJ_counts_pattern_15.n_74-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMN_ChIP_REST_HeLa-S3_ENCSR673YCJ_counts_pattern_16.n_50-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMN_ChIP_REST_HeLa-S3_ENCSR673YCJ_counts_pattern_17.n_44-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMN_ChIP_REST_HeLa-S3_ENCSR673YCJ_counts_pattern_18.n_36-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMN_ChIP_REST_HeLa-S3_ENCSR673YCJ_counts_pattern_19.n_34-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMN_ChIP_REST_HeLa-S3_ENCSR673YCJ_counts_pattern_1.n_2754-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMN_ChIP_REST_HeLa-S3_ENCSR673YCJ_counts_pattern_20.n_32-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMN_ChIP_REST_HeLa-S3_ENCSR673YCJ_counts_pattern_21.n_20-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMN_ChIP_REST_HeLa-S3_ENCSR673YCJ_counts_pattern_2.n_2603-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMN_ChIP_REST_HeLa-S3_ENCSR673YCJ_counts_pattern_3.n_1209-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMN_ChIP_REST_HeLa-S3_ENCSR673YCJ_counts_pattern_4.n_1002-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMN_ChIP_REST_HeLa-S3_ENCSR673YCJ_counts_pattern_5.n_385-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMN_ChIP_REST_HeLa-S3_ENCSR673YCJ_counts_pattern_6.n_254-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMN_ChIP_REST_HeLa-S3_ENCSR673YCJ_counts_pattern_7.n_153-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMN_ChIP_REST_HeLa-S3_ENCSR673YCJ_counts_pattern_8.n_149-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMN_ChIP_REST_HeLa-S3_ENCSR673YCJ_counts_pattern_9.n_138-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_counts_pattern_0.n_7041-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_counts_pattern_10.n_88-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_counts_pattern_11.n_86-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_counts_pattern_12.n_77-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_counts_pattern_13.n_68-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_counts_pattern_14.n_28-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_counts_pattern_15.n_25-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_counts_pattern_16.n_20-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_counts_pattern_1.n_3329-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_counts_pattern_2.n_2525-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_counts_pattern_3.n_720-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_counts_pattern_4.n_344-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_counts_pattern_5.n_207-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_counts_pattern_6.n_168-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_counts_pattern_7.n_142-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_counts_pattern_8.n_121-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_counts_pattern_9.n_105-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_counts_pattern_0.n_2791-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_counts_pattern_10.n_50-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_counts_pattern_11.n_49-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_counts_pattern_12.n_33-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_counts_pattern_13.n_29-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_counts_pattern_14.n_24-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_counts_pattern_1.n_1170-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_counts_pattern_2.n_1125-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_counts_pattern_3.n_278-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_counts_pattern_4.n_237-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_counts_pattern_5.n_196-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_counts_pattern_6.n_153-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_counts_pattern_7.n_126-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_counts_pattern_8.n_87-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_counts_pattern_9.n_60-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOX_ChIP_REST_PFSK-1_ENCSR229LTB_counts_pattern_0.n_3850-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOX_ChIP_REST_PFSK-1_ENCSR229LTB_counts_pattern_10.n_99-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOX_ChIP_REST_PFSK-1_ENCSR229LTB_counts_pattern_11.n_87-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOX_ChIP_REST_PFSK-1_ENCSR229LTB_counts_pattern_12.n_61-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOX_ChIP_REST_PFSK-1_ENCSR229LTB_counts_pattern_13.n_41-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOX_ChIP_REST_PFSK-1_ENCSR229LTB_counts_pattern_14.n_35-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOX_ChIP_REST_PFSK-1_ENCSR229LTB_counts_pattern_15.n_31-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOX_ChIP_REST_PFSK-1_ENCSR229LTB_counts_pattern_16.n_28-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOX_ChIP_REST_PFSK-1_ENCSR229LTB_counts_pattern_1.n_3220-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOX_ChIP_REST_PFSK-1_ENCSR229LTB_counts_pattern_2.n_623-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOX_ChIP_REST_PFSK-1_ENCSR229LTB_counts_pattern_3.n_602-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOX_ChIP_REST_PFSK-1_ENCSR229LTB_counts_pattern_4.n_227-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOX_ChIP_REST_PFSK-1_ENCSR229LTB_counts_pattern_5.n_176-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOX_ChIP_REST_PFSK-1_ENCSR229LTB_counts_pattern_6.n_145-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOX_ChIP_REST_PFSK-1_ENCSR229LTB_counts_pattern_7.n_127-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOX_ChIP_REST_PFSK-1_ENCSR229LTB_counts_pattern_8.n_118-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOX_ChIP_REST_PFSK-1_ENCSR229LTB_counts_pattern_9.n_101-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOZ_ChIP_REST_SK-N-SH_ENCSR386QUI_counts_pattern_0.n_3143-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOZ_ChIP_REST_SK-N-SH_ENCSR386QUI_counts_pattern_1.n_2405-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOZ_ChIP_REST_SK-N-SH_ENCSR386QUI_counts_pattern_2.n_2104-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOZ_ChIP_REST_SK-N-SH_ENCSR386QUI_counts_pattern_3.n_1509-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOZ_ChIP_REST_SK-N-SH_ENCSR386QUI_counts_pattern_4.n_147-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOZ_ChIP_REST_SK-N-SH_ENCSR386QUI_counts_pattern_5.n_100-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOZ_ChIP_REST_SK-N-SH_ENCSR386QUI_counts_pattern_6.n_49-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOZ_ChIP_REST_SK-N-SH_ENCSR386QUI_counts_pattern_7.n_46-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOZ_ChIP_REST_SK-N-SH_ENCSR386QUI_counts_pattern_8.n_20-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BPK_ChIP_REST_Panc1_ENCSR765OBS_counts_pattern_0.n_2042-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BPK_ChIP_REST_Panc1_ENCSR765OBS_counts_pattern_1.n_1005-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BPK_ChIP_REST_Panc1_ENCSR765OBS_counts_pattern_2.n_439-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BPK_ChIP_REST_Panc1_ENCSR765OBS_counts_pattern_3.n_214-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BPK_ChIP_REST_Panc1_ENCSR765OBS_counts_pattern_4.n_175-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BPK_ChIP_REST_Panc1_ENCSR765OBS_counts_pattern_5.n_103-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BPK_ChIP_REST_Panc1_ENCSR765OBS_counts_pattern_6.n_92-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BPK_ChIP_REST_Panc1_ENCSR765OBS_counts_pattern_7.n_70-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BPK_ChIP_REST_Panc1_ENCSR765OBS_counts_pattern_8.n_46-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_counts_pattern_0.n_2583-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_counts_pattern_10.n_96-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_counts_pattern_11.n_86-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_counts_pattern_12.n_73-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_counts_pattern_13.n_71-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_counts_pattern_14.n_70-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_counts_pattern_15.n_44-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_counts_pattern_16.n_42-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_counts_pattern_17.n_35-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_counts_pattern_1.n_2421-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_counts_pattern_2.n_1200-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_counts_pattern_3.n_901-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_counts_pattern_4.n_272-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_counts_pattern_5.n_227-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_counts_pattern_6.n_213-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_counts_pattern_7.n_137-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_counts_pattern_8.n_121-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_counts_pattern_9.n_105-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_counts_pattern_0.n_2327-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_counts_pattern_10.n_60-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_counts_pattern_11.n_50-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_counts_pattern_12.n_49-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_counts_pattern_13.n_36-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_counts_pattern_14.n_36-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_counts_pattern_15.n_27-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_counts_pattern_16.n_24-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_counts_pattern_1.n_924-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_counts_pattern_2.n_391-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_counts_pattern_3.n_157-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_counts_pattern_4.n_147-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_counts_pattern_5.n_130-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_counts_pattern_6.n_108-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_counts_pattern_7.n_90-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_counts_pattern_8.n_80-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_counts_pattern_9.n_78-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BSP_ChIP_REST_MCF-7_ENCSR640PXF_counts_pattern_0.n_3305-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BSP_ChIP_REST_MCF-7_ENCSR640PXF_counts_pattern_10.n_44-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BSP_ChIP_REST_MCF-7_ENCSR640PXF_counts_pattern_11.n_28-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BSP_ChIP_REST_MCF-7_ENCSR640PXF_counts_pattern_12.n_26-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BSP_ChIP_REST_MCF-7_ENCSR640PXF_counts_pattern_13.n_25-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BSP_ChIP_REST_MCF-7_ENCSR640PXF_counts_pattern_1.n_2611-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BSP_ChIP_REST_MCF-7_ENCSR640PXF_counts_pattern_2.n_1331-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BSP_ChIP_REST_MCF-7_ENCSR640PXF_counts_pattern_3.n_724-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BSP_ChIP_REST_MCF-7_ENCSR640PXF_counts_pattern_4.n_590-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BSP_ChIP_REST_MCF-7_ENCSR640PXF_counts_pattern_5.n_226-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BSP_ChIP_REST_MCF-7_ENCSR640PXF_counts_pattern_6.n_197-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BSP_ChIP_REST_MCF-7_ENCSR640PXF_counts_pattern_7.n_134-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BSP_ChIP_REST_MCF-7_ENCSR640PXF_counts_pattern_8.n_121-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BSP_ChIP_REST_MCF-7_ENCSR640PXF_counts_pattern_9.n_86-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTF_ChIP_REST_HL-60_ENCSR900KSB_counts_pattern_0.n_3217-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTF_ChIP_REST_HL-60_ENCSR900KSB_counts_pattern_10.n_49-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTF_ChIP_REST_HL-60_ENCSR900KSB_counts_pattern_11.n_22-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTF_ChIP_REST_HL-60_ENCSR900KSB_counts_pattern_12.n_21-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTF_ChIP_REST_HL-60_ENCSR900KSB_counts_pattern_1.n_2434-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTF_ChIP_REST_HL-60_ENCSR900KSB_counts_pattern_2.n_787-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTF_ChIP_REST_HL-60_ENCSR900KSB_counts_pattern_3.n_222-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTF_ChIP_REST_HL-60_ENCSR900KSB_counts_pattern_4.n_192-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTF_ChIP_REST_HL-60_ENCSR900KSB_counts_pattern_5.n_140-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTF_ChIP_REST_HL-60_ENCSR900KSB_counts_pattern_6.n_117-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTF_ChIP_REST_HL-60_ENCSR900KSB_counts_pattern_7.n_95-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTF_ChIP_REST_HL-60_ENCSR900KSB_counts_pattern_8.n_83-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTF_ChIP_REST_HL-60_ENCSR900KSB_counts_pattern_9.n_70-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_counts_pattern_0.n_9177-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_counts_pattern_10.n_178-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_counts_pattern_11.n_161-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_counts_pattern_12.n_155-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_counts_pattern_13.n_153-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_counts_pattern_14.n_130-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_counts_pattern_15.n_116-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_counts_pattern_16.n_105-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_counts_pattern_17.n_101-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_counts_pattern_18.n_68-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_counts_pattern_19.n_61-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_counts_pattern_1.n_6083-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_counts_pattern_20.n_54-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_counts_pattern_21.n_53-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_counts_pattern_22.n_52-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_counts_pattern_23.n_52-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_counts_pattern_24.n_48-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_counts_pattern_25.n_45-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_counts_pattern_26.n_38-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_counts_pattern_2.n_1484-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_counts_pattern_3.n_831-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_counts_pattern_4.n_716-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_counts_pattern_5.n_637-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_counts_pattern_6.n_483-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_counts_pattern_7.n_462-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_counts_pattern_8.n_406-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_counts_pattern_9.n_202-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUP_ChIP_REST_Panc1_ENCSR132GIN_counts_pattern_0.n_2077-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUP_ChIP_REST_Panc1_ENCSR132GIN_counts_pattern_1.n_1956-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUP_ChIP_REST_Panc1_ENCSR132GIN_counts_pattern_2.n_353-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUP_ChIP_REST_Panc1_ENCSR132GIN_counts_pattern_3.n_159-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUP_ChIP_REST_Panc1_ENCSR132GIN_counts_pattern_4.n_137-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUP_ChIP_REST_Panc1_ENCSR132GIN_counts_pattern_5.n_49-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUP_ChIP_REST_Panc1_ENCSR132GIN_counts_pattern_6.n_41-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUP_ChIP_REST_Panc1_ENCSR132GIN_counts_pattern_7.n_27-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUP_ChIP_REST_Panc1_ENCSR132GIN_counts_pattern_8.n_22-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUP_ChIP_REST_Panc1_ENCSR132GIN_counts_pattern_9.n_20-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUU_ChIP_REST_Ishikawa_ENCSR174BCS_counts_pattern_0.n_3479-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUU_ChIP_REST_Ishikawa_ENCSR174BCS_counts_pattern_10.n_67-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUU_ChIP_REST_Ishikawa_ENCSR174BCS_counts_pattern_11.n_64-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUU_ChIP_REST_Ishikawa_ENCSR174BCS_counts_pattern_12.n_62-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUU_ChIP_REST_Ishikawa_ENCSR174BCS_counts_pattern_13.n_60-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUU_ChIP_REST_Ishikawa_ENCSR174BCS_counts_pattern_14.n_46-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUU_ChIP_REST_Ishikawa_ENCSR174BCS_counts_pattern_15.n_28-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUU_ChIP_REST_Ishikawa_ENCSR174BCS_counts_pattern_16.n_27-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUU_ChIP_REST_Ishikawa_ENCSR174BCS_counts_pattern_17.n_25-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUU_ChIP_REST_Ishikawa_ENCSR174BCS_counts_pattern_1.n_2634-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUU_ChIP_REST_Ishikawa_ENCSR174BCS_counts_pattern_2.n_1639-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUU_ChIP_REST_Ishikawa_ENCSR174BCS_counts_pattern_3.n_609-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUU_ChIP_REST_Ishikawa_ENCSR174BCS_counts_pattern_4.n_231-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUU_ChIP_REST_Ishikawa_ENCSR174BCS_counts_pattern_5.n_127-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUU_ChIP_REST_Ishikawa_ENCSR174BCS_counts_pattern_6.n_122-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUU_ChIP_REST_Ishikawa_ENCSR174BCS_counts_pattern_7.n_101-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUU_ChIP_REST_Ishikawa_ENCSR174BCS_counts_pattern_8.n_94-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUU_ChIP_REST_Ishikawa_ENCSR174BCS_counts_pattern_9.n_92-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BVI_ChIP_REST_HCT116_ENCSR148KXV_counts_pattern_0.n_2113-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BVI_ChIP_REST_HCT116_ENCSR148KXV_counts_pattern_1.n_694-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BVI_ChIP_REST_HCT116_ENCSR148KXV_counts_pattern_2.n_113-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BVI_ChIP_REST_HCT116_ENCSR148KXV_counts_pattern_3.n_100-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BVI_ChIP_REST_HCT116_ENCSR148KXV_counts_pattern_4.n_54-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BVI_ChIP_REST_HCT116_ENCSR148KXV_counts_pattern_5.n_48-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BVI_ChIP_REST_HCT116_ENCSR148KXV_counts_pattern_6.n_36-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR054JMQ_ChIP_REST_K562_ENCSR759WXZ_counts_pattern_0.n_1501-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR054JMQ_ChIP_REST_K562_ENCSR759WXZ_counts_pattern_10.n_23-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR054JMQ_ChIP_REST_K562_ENCSR759WXZ_counts_pattern_11.n_21-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR054JMQ_ChIP_REST_K562_ENCSR759WXZ_counts_pattern_12.n_21-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR054JMQ_ChIP_REST_K562_ENCSR759WXZ_counts_pattern_1.n_878-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR054JMQ_ChIP_REST_K562_ENCSR759WXZ_counts_pattern_2.n_281-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR054JMQ_ChIP_REST_K562_ENCSR759WXZ_counts_pattern_3.n_207-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR054JMQ_ChIP_REST_K562_ENCSR759WXZ_counts_pattern_4.n_185-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR054JMQ_ChIP_REST_K562_ENCSR759WXZ_counts_pattern_5.n_124-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR054JMQ_ChIP_REST_K562_ENCSR759WXZ_counts_pattern_6.n_52-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR054JMQ_ChIP_REST_K562_ENCSR759WXZ_counts_pattern_7.n_40-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR054JMQ_ChIP_REST_K562_ENCSR759WXZ_counts_pattern_8.n_37-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR054JMQ_ChIP_REST_K562_ENCSR759WXZ_counts_pattern_9.n_27-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_counts_pattern_0.n_14541-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_counts_pattern_10.n_163-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_counts_pattern_11.n_138-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_counts_pattern_12.n_133-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_counts_pattern_13.n_98-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_counts_pattern_14.n_92-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_counts_pattern_15.n_67-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_counts_pattern_16.n_61-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_counts_pattern_17.n_57-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_counts_pattern_18.n_54-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_counts_pattern_19.n_30-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_counts_pattern_1.n_3171-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_counts_pattern_2.n_1441-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_counts_pattern_3.n_1078-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_counts_pattern_4.n_555-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_counts_pattern_5.n_478-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_counts_pattern_6.n_260-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_counts_pattern_7.n_213-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_counts_pattern_8.n_195-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_counts_pattern_9.n_194-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR663WAR_ChIP_REST_H1_ENCSR296LFF_counts_pattern_0.n_2224-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR663WAR_ChIP_REST_H1_ENCSR296LFF_counts_pattern_10.n_76-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR663WAR_ChIP_REST_H1_ENCSR296LFF_counts_pattern_11.n_71-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR663WAR_ChIP_REST_H1_ENCSR296LFF_counts_pattern_12.n_57-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR663WAR_ChIP_REST_H1_ENCSR296LFF_counts_pattern_13.n_46-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR663WAR_ChIP_REST_H1_ENCSR296LFF_counts_pattern_14.n_46-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR663WAR_ChIP_REST_H1_ENCSR296LFF_counts_pattern_15.n_37-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR663WAR_ChIP_REST_H1_ENCSR296LFF_counts_pattern_16.n_25-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR663WAR_ChIP_REST_H1_ENCSR296LFF_counts_pattern_1.n_1217-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR663WAR_ChIP_REST_H1_ENCSR296LFF_counts_pattern_2.n_1102-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR663WAR_ChIP_REST_H1_ENCSR296LFF_counts_pattern_3.n_455-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR663WAR_ChIP_REST_H1_ENCSR296LFF_counts_pattern_4.n_296-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR663WAR_ChIP_REST_H1_ENCSR296LFF_counts_pattern_5.n_226-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR663WAR_ChIP_REST_H1_ENCSR296LFF_counts_pattern_6.n_208-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR663WAR_ChIP_REST_H1_ENCSR296LFF_counts_pattern_7.n_96-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR663WAR_ChIP_REST_H1_ENCSR296LFF_counts_pattern_8.n_88-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR663WAR_ChIP_REST_H1_ENCSR296LFF_counts_pattern_9.n_78-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_counts_pattern_0.n_6621-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_counts_pattern_10.n_158-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_counts_pattern_11.n_135-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_counts_pattern_12.n_73-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_counts_pattern_13.n_46-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_counts_pattern_14.n_42-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_counts_pattern_15.n_39-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_counts_pattern_1.n_2853-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_counts_pattern_2.n_2696-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_counts_pattern_3.n_1782-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_counts_pattern_4.n_1752-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_counts_pattern_5.n_1666-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_counts_pattern_6.n_916-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_counts_pattern_7.n_754-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_counts_pattern_8.n_298-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_counts_pattern_9.n_276-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR871KYB_ChIP_REST_GM23338_ENCSR543TOL_counts_pattern_0.n_2867-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR871KYB_ChIP_REST_GM23338_ENCSR543TOL_counts_pattern_10.n_42-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR871KYB_ChIP_REST_GM23338_ENCSR543TOL_counts_pattern_11.n_40-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR871KYB_ChIP_REST_GM23338_ENCSR543TOL_counts_pattern_12.n_35-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR871KYB_ChIP_REST_GM23338_ENCSR543TOL_counts_pattern_13.n_27-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR871KYB_ChIP_REST_GM23338_ENCSR543TOL_counts_pattern_1.n_1373-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR871KYB_ChIP_REST_GM23338_ENCSR543TOL_counts_pattern_2.n_450-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR871KYB_ChIP_REST_GM23338_ENCSR543TOL_counts_pattern_3.n_178-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR871KYB_ChIP_REST_GM23338_ENCSR543TOL_counts_pattern_4.n_154-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR871KYB_ChIP_REST_GM23338_ENCSR543TOL_counts_pattern_5.n_150-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR871KYB_ChIP_REST_GM23338_ENCSR543TOL_counts_pattern_6.n_136-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR871KYB_ChIP_REST_GM23338_ENCSR543TOL_counts_pattern_7.n_110-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR871KYB_ChIP_REST_GM23338_ENCSR543TOL_counts_pattern_8.n_101-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR871KYB_ChIP_REST_GM23338_ENCSR543TOL_counts_pattern_9.n_99-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR892DRK_ChIP_REST_A549_ENCSR584FHS_counts_pattern_0.n_2756-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR892DRK_ChIP_REST_A549_ENCSR584FHS_counts_pattern_10.n_48-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR892DRK_ChIP_REST_A549_ENCSR584FHS_counts_pattern_11.n_45-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR892DRK_ChIP_REST_A549_ENCSR584FHS_counts_pattern_12.n_35-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR892DRK_ChIP_REST_A549_ENCSR584FHS_counts_pattern_13.n_27-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR892DRK_ChIP_REST_A549_ENCSR584FHS_counts_pattern_1.n_2538-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR892DRK_ChIP_REST_A549_ENCSR584FHS_counts_pattern_2.n_1044-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR892DRK_ChIP_REST_A549_ENCSR584FHS_counts_pattern_3.n_883-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR892DRK_ChIP_REST_A549_ENCSR584FHS_counts_pattern_4.n_647-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR892DRK_ChIP_REST_A549_ENCSR584FHS_counts_pattern_5.n_285-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR892DRK_ChIP_REST_A549_ENCSR584FHS_counts_pattern_6.n_176-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR892DRK_ChIP_REST_A549_ENCSR584FHS_counts_pattern_7.n_114-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR892DRK_ChIP_REST_A549_ENCSR584FHS_counts_pattern_8.n_108-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR892DRK_ChIP_REST_A549_ENCSR584FHS_counts_pattern_9.n_56-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR893QWP_ChIP_REST_liver_ENCSR314BIS_counts_pattern_0.n_1890-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR893QWP_ChIP_REST_liver_ENCSR314BIS_counts_pattern_10.n_38-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR893QWP_ChIP_REST_liver_ENCSR314BIS_counts_pattern_1.n_1874-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR893QWP_ChIP_REST_liver_ENCSR314BIS_counts_pattern_2.n_1504-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR893QWP_ChIP_REST_liver_ENCSR314BIS_counts_pattern_3.n_1117-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR893QWP_ChIP_REST_liver_ENCSR314BIS_counts_pattern_4.n_1011-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR893QWP_ChIP_REST_liver_ENCSR314BIS_counts_pattern_5.n_258-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR893QWP_ChIP_REST_liver_ENCSR314BIS_counts_pattern_6.n_158-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR893QWP_ChIP_REST_liver_ENCSR314BIS_counts_pattern_7.n_138-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR893QWP_ChIP_REST_liver_ENCSR314BIS_counts_pattern_8.n_116-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR893QWP_ChIP_REST_liver_ENCSR314BIS_counts_pattern_9.n_94-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_counts_pattern_0.n_5637-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_counts_pattern_10.n_131-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_counts_pattern_11.n_120-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_counts_pattern_12.n_99-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_counts_pattern_13.n_72-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_counts_pattern_14.n_55-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_counts_pattern_15.n_41-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_counts_pattern_16.n_39-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_counts_pattern_17.n_29-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_counts_pattern_18.n_29-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_counts_pattern_1.n_4616-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_counts_pattern_2.n_3846-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_counts_pattern_3.n_863-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_counts_pattern_4.n_794-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_counts_pattern_5.n_431-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_counts_pattern_6.n_297-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_counts_pattern_7.n_228-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_counts_pattern_8.n_139-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/REST-201/pos_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_counts_pattern_9.n_137-vs-REST-201.alignment counts-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RLF-201/pos_patterns.ENCSR718SDE_ChIP_RLF_K562_ENCSR602TYB_counts_pattern_0.n_1491-vs-RLF-201.alignment counts-znf_b1h_alignment/RLF-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RLF-201/pos_patterns.ENCSR718SDE_ChIP_RLF_K562_ENCSR602TYB_counts_pattern_1.n_1282-vs-RLF-201.alignment counts-znf_b1h_alignment/RLF-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RLF-201/pos_patterns.ENCSR718SDE_ChIP_RLF_K562_ENCSR602TYB_counts_pattern_2.n_1259-vs-RLF-201.alignment counts-znf_b1h_alignment/RLF-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RLF-201/pos_patterns.ENCSR718SDE_ChIP_RLF_K562_ENCSR602TYB_counts_pattern_3.n_1228-vs-RLF-201.alignment counts-znf_b1h_alignment/RLF-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RLF-201/pos_patterns.ENCSR718SDE_ChIP_RLF_K562_ENCSR602TYB_counts_pattern_4.n_584-vs-RLF-201.alignment counts-znf_b1h_alignment/RLF-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RLF-201/pos_patterns.ENCSR718SDE_ChIP_RLF_K562_ENCSR602TYB_counts_pattern_5.n_185-vs-RLF-201.alignment counts-znf_b1h_alignment/RLF-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RLF-201/pos_patterns.ENCSR718SDE_ChIP_RLF_K562_ENCSR602TYB_counts_pattern_6.n_83-vs-RLF-201.alignment counts-znf_b1h_alignment/RLF-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RLF-201/pos_patterns.ENCSR718SDE_ChIP_RLF_K562_ENCSR602TYB_counts_pattern_7.n_40-vs-RLF-201.alignment counts-znf_b1h_alignment/RLF-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-201/neg_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_0.n_51-vs-RREB1-201.alignment counts-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-201/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_0.n_3724-vs-RREB1-201.alignment counts-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-201/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_10.n_188-vs-RREB1-201.alignment counts-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-201/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_11.n_149-vs-RREB1-201.alignment counts-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-201/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_12.n_82-vs-RREB1-201.alignment counts-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-201/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_13.n_53-vs-RREB1-201.alignment counts-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-201/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_14.n_37-vs-RREB1-201.alignment counts-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-201/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_15.n_29-vs-RREB1-201.alignment counts-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-201/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_16.n_26-vs-RREB1-201.alignment counts-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-201/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_1.n_3154-vs-RREB1-201.alignment counts-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-201/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_2.n_2139-vs-RREB1-201.alignment counts-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-201/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_3.n_1833-vs-RREB1-201.alignment counts-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-201/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_4.n_1434-vs-RREB1-201.alignment counts-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-201/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_5.n_1360-vs-RREB1-201.alignment counts-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-201/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_6.n_933-vs-RREB1-201.alignment counts-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-201/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_7.n_528-vs-RREB1-201.alignment counts-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-201/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_8.n_390-vs-RREB1-201.alignment counts-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-201/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_9.n_370-vs-RREB1-201.alignment counts-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-201/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_0.n_1150-vs-RREB1-201.alignment counts-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-201/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_10.n_48-vs-RREB1-201.alignment counts-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-201/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_11.n_28-vs-RREB1-201.alignment counts-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-201/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_12.n_27-vs-RREB1-201.alignment counts-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-201/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_13.n_24-vs-RREB1-201.alignment counts-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-201/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_14.n_22-vs-RREB1-201.alignment counts-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-201/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_15.n_21-vs-RREB1-201.alignment counts-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-201/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_1.n_763-vs-RREB1-201.alignment counts-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-201/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_2.n_418-vs-RREB1-201.alignment counts-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-201/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_3.n_241-vs-RREB1-201.alignment counts-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-201/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_4.n_206-vs-RREB1-201.alignment counts-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-201/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_5.n_164-vs-RREB1-201.alignment counts-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-201/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_6.n_158-vs-RREB1-201.alignment counts-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-201/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_7.n_95-vs-RREB1-201.alignment counts-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-201/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_8.n_55-vs-RREB1-201.alignment counts-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-201/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_9.n_50-vs-RREB1-201.alignment counts-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-203/neg_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_0.n_51-vs-RREB1-203.alignment counts-znf_b1h_alignment/RREB1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-203/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_0.n_3724-vs-RREB1-203.alignment counts-znf_b1h_alignment/RREB1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-203/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_10.n_188-vs-RREB1-203.alignment counts-znf_b1h_alignment/RREB1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-203/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_11.n_149-vs-RREB1-203.alignment counts-znf_b1h_alignment/RREB1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-203/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_12.n_82-vs-RREB1-203.alignment counts-znf_b1h_alignment/RREB1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-203/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_13.n_53-vs-RREB1-203.alignment counts-znf_b1h_alignment/RREB1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-203/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_14.n_37-vs-RREB1-203.alignment counts-znf_b1h_alignment/RREB1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-203/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_15.n_29-vs-RREB1-203.alignment counts-znf_b1h_alignment/RREB1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-203/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_16.n_26-vs-RREB1-203.alignment counts-znf_b1h_alignment/RREB1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-203/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_1.n_3154-vs-RREB1-203.alignment counts-znf_b1h_alignment/RREB1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-203/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_2.n_2139-vs-RREB1-203.alignment counts-znf_b1h_alignment/RREB1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-203/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_3.n_1833-vs-RREB1-203.alignment counts-znf_b1h_alignment/RREB1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-203/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_4.n_1434-vs-RREB1-203.alignment counts-znf_b1h_alignment/RREB1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-203/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_5.n_1360-vs-RREB1-203.alignment counts-znf_b1h_alignment/RREB1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-203/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_6.n_933-vs-RREB1-203.alignment counts-znf_b1h_alignment/RREB1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-203/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_7.n_528-vs-RREB1-203.alignment counts-znf_b1h_alignment/RREB1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-203/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_8.n_390-vs-RREB1-203.alignment counts-znf_b1h_alignment/RREB1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-203/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_9.n_370-vs-RREB1-203.alignment counts-znf_b1h_alignment/RREB1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-203/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_0.n_1150-vs-RREB1-203.alignment counts-znf_b1h_alignment/RREB1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-203/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_10.n_48-vs-RREB1-203.alignment counts-znf_b1h_alignment/RREB1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-203/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_11.n_28-vs-RREB1-203.alignment counts-znf_b1h_alignment/RREB1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-203/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_12.n_27-vs-RREB1-203.alignment counts-znf_b1h_alignment/RREB1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-203/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_13.n_24-vs-RREB1-203.alignment counts-znf_b1h_alignment/RREB1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-203/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_14.n_22-vs-RREB1-203.alignment counts-znf_b1h_alignment/RREB1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-203/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_15.n_21-vs-RREB1-203.alignment counts-znf_b1h_alignment/RREB1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-203/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_1.n_763-vs-RREB1-203.alignment counts-znf_b1h_alignment/RREB1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-203/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_2.n_418-vs-RREB1-203.alignment counts-znf_b1h_alignment/RREB1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-203/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_3.n_241-vs-RREB1-203.alignment counts-znf_b1h_alignment/RREB1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-203/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_4.n_206-vs-RREB1-203.alignment counts-znf_b1h_alignment/RREB1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-203/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_5.n_164-vs-RREB1-203.alignment counts-znf_b1h_alignment/RREB1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-203/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_6.n_158-vs-RREB1-203.alignment counts-znf_b1h_alignment/RREB1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-203/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_7.n_95-vs-RREB1-203.alignment counts-znf_b1h_alignment/RREB1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-203/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_8.n_55-vs-RREB1-203.alignment counts-znf_b1h_alignment/RREB1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-203/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_9.n_50-vs-RREB1-203.alignment counts-znf_b1h_alignment/RREB1-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-207/neg_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_0.n_51-vs-RREB1-207.alignment counts-znf_b1h_alignment/RREB1-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-207/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_0.n_3724-vs-RREB1-207.alignment counts-znf_b1h_alignment/RREB1-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-207/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_10.n_188-vs-RREB1-207.alignment counts-znf_b1h_alignment/RREB1-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-207/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_11.n_149-vs-RREB1-207.alignment counts-znf_b1h_alignment/RREB1-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-207/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_12.n_82-vs-RREB1-207.alignment counts-znf_b1h_alignment/RREB1-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-207/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_13.n_53-vs-RREB1-207.alignment counts-znf_b1h_alignment/RREB1-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-207/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_14.n_37-vs-RREB1-207.alignment counts-znf_b1h_alignment/RREB1-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-207/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_15.n_29-vs-RREB1-207.alignment counts-znf_b1h_alignment/RREB1-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-207/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_16.n_26-vs-RREB1-207.alignment counts-znf_b1h_alignment/RREB1-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-207/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_1.n_3154-vs-RREB1-207.alignment counts-znf_b1h_alignment/RREB1-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-207/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_2.n_2139-vs-RREB1-207.alignment counts-znf_b1h_alignment/RREB1-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-207/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_3.n_1833-vs-RREB1-207.alignment counts-znf_b1h_alignment/RREB1-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-207/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_4.n_1434-vs-RREB1-207.alignment counts-znf_b1h_alignment/RREB1-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-207/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_5.n_1360-vs-RREB1-207.alignment counts-znf_b1h_alignment/RREB1-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-207/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_6.n_933-vs-RREB1-207.alignment counts-znf_b1h_alignment/RREB1-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-207/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_7.n_528-vs-RREB1-207.alignment counts-znf_b1h_alignment/RREB1-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-207/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_8.n_390-vs-RREB1-207.alignment counts-znf_b1h_alignment/RREB1-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-207/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_9.n_370-vs-RREB1-207.alignment counts-znf_b1h_alignment/RREB1-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-207/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_0.n_1150-vs-RREB1-207.alignment counts-znf_b1h_alignment/RREB1-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-207/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_10.n_48-vs-RREB1-207.alignment counts-znf_b1h_alignment/RREB1-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-207/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_11.n_28-vs-RREB1-207.alignment counts-znf_b1h_alignment/RREB1-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-207/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_12.n_27-vs-RREB1-207.alignment counts-znf_b1h_alignment/RREB1-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-207/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_13.n_24-vs-RREB1-207.alignment counts-znf_b1h_alignment/RREB1-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-207/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_14.n_22-vs-RREB1-207.alignment counts-znf_b1h_alignment/RREB1-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-207/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_15.n_21-vs-RREB1-207.alignment counts-znf_b1h_alignment/RREB1-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-207/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_1.n_763-vs-RREB1-207.alignment counts-znf_b1h_alignment/RREB1-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-207/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_2.n_418-vs-RREB1-207.alignment counts-znf_b1h_alignment/RREB1-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-207/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_3.n_241-vs-RREB1-207.alignment counts-znf_b1h_alignment/RREB1-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-207/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_4.n_206-vs-RREB1-207.alignment counts-znf_b1h_alignment/RREB1-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-207/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_5.n_164-vs-RREB1-207.alignment counts-znf_b1h_alignment/RREB1-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-207/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_6.n_158-vs-RREB1-207.alignment counts-znf_b1h_alignment/RREB1-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-207/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_7.n_95-vs-RREB1-207.alignment counts-znf_b1h_alignment/RREB1-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-207/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_8.n_55-vs-RREB1-207.alignment counts-znf_b1h_alignment/RREB1-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-207/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_9.n_50-vs-RREB1-207.alignment counts-znf_b1h_alignment/RREB1-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-210/neg_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_0.n_51-vs-RREB1-210.alignment counts-znf_b1h_alignment/RREB1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-210/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_0.n_3724-vs-RREB1-210.alignment counts-znf_b1h_alignment/RREB1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-210/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_10.n_188-vs-RREB1-210.alignment counts-znf_b1h_alignment/RREB1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-210/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_11.n_149-vs-RREB1-210.alignment counts-znf_b1h_alignment/RREB1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-210/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_12.n_82-vs-RREB1-210.alignment counts-znf_b1h_alignment/RREB1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-210/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_13.n_53-vs-RREB1-210.alignment counts-znf_b1h_alignment/RREB1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-210/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_14.n_37-vs-RREB1-210.alignment counts-znf_b1h_alignment/RREB1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-210/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_15.n_29-vs-RREB1-210.alignment counts-znf_b1h_alignment/RREB1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-210/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_16.n_26-vs-RREB1-210.alignment counts-znf_b1h_alignment/RREB1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-210/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_1.n_3154-vs-RREB1-210.alignment counts-znf_b1h_alignment/RREB1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-210/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_2.n_2139-vs-RREB1-210.alignment counts-znf_b1h_alignment/RREB1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-210/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_3.n_1833-vs-RREB1-210.alignment counts-znf_b1h_alignment/RREB1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-210/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_4.n_1434-vs-RREB1-210.alignment counts-znf_b1h_alignment/RREB1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-210/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_5.n_1360-vs-RREB1-210.alignment counts-znf_b1h_alignment/RREB1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-210/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_6.n_933-vs-RREB1-210.alignment counts-znf_b1h_alignment/RREB1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-210/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_7.n_528-vs-RREB1-210.alignment counts-znf_b1h_alignment/RREB1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-210/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_8.n_390-vs-RREB1-210.alignment counts-znf_b1h_alignment/RREB1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-210/pos_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_counts_pattern_9.n_370-vs-RREB1-210.alignment counts-znf_b1h_alignment/RREB1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-210/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_0.n_1150-vs-RREB1-210.alignment counts-znf_b1h_alignment/RREB1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-210/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_10.n_48-vs-RREB1-210.alignment counts-znf_b1h_alignment/RREB1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-210/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_11.n_28-vs-RREB1-210.alignment counts-znf_b1h_alignment/RREB1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-210/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_12.n_27-vs-RREB1-210.alignment counts-znf_b1h_alignment/RREB1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-210/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_13.n_24-vs-RREB1-210.alignment counts-znf_b1h_alignment/RREB1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-210/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_14.n_22-vs-RREB1-210.alignment counts-znf_b1h_alignment/RREB1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-210/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_15.n_21-vs-RREB1-210.alignment counts-znf_b1h_alignment/RREB1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-210/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_1.n_763-vs-RREB1-210.alignment counts-znf_b1h_alignment/RREB1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-210/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_2.n_418-vs-RREB1-210.alignment counts-znf_b1h_alignment/RREB1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-210/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_3.n_241-vs-RREB1-210.alignment counts-znf_b1h_alignment/RREB1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-210/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_4.n_206-vs-RREB1-210.alignment counts-znf_b1h_alignment/RREB1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-210/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_5.n_164-vs-RREB1-210.alignment counts-znf_b1h_alignment/RREB1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-210/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_6.n_158-vs-RREB1-210.alignment counts-znf_b1h_alignment/RREB1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-210/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_7.n_95-vs-RREB1-210.alignment counts-znf_b1h_alignment/RREB1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-210/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_8.n_55-vs-RREB1-210.alignment counts-znf_b1h_alignment/RREB1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/RREB1-210/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_counts_pattern_9.n_50-vs-RREB1-210.alignment counts-znf_b1h_alignment/RREB1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-201/pos_patterns.ENCSR044FMM_ChIP_SALL2_HEK293_ENCSR497PXH_counts_pattern_0.n_525-vs-SALL2-201.alignment counts-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-201/pos_patterns.ENCSR044FMM_ChIP_SALL2_HEK293_ENCSR497PXH_counts_pattern_1.n_157-vs-SALL2-201.alignment counts-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-201/pos_patterns.ENCSR044FMM_ChIP_SALL2_HEK293_ENCSR497PXH_counts_pattern_2.n_65-vs-SALL2-201.alignment counts-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-201/pos_patterns.ENCSR044FMM_ChIP_SALL2_HEK293_ENCSR497PXH_counts_pattern_3.n_51-vs-SALL2-201.alignment counts-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-201/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_0.n_2551-vs-SALL2-201.alignment counts-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-201/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_10.n_456-vs-SALL2-201.alignment counts-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-201/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_11.n_327-vs-SALL2-201.alignment counts-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-201/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_12.n_291-vs-SALL2-201.alignment counts-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-201/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_13.n_271-vs-SALL2-201.alignment counts-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-201/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_14.n_252-vs-SALL2-201.alignment counts-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-201/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_15.n_195-vs-SALL2-201.alignment counts-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-201/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_16.n_180-vs-SALL2-201.alignment counts-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-201/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_17.n_154-vs-SALL2-201.alignment counts-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-201/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_18.n_135-vs-SALL2-201.alignment counts-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-201/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_19.n_105-vs-SALL2-201.alignment counts-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-201/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_1.n_2442-vs-SALL2-201.alignment counts-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-201/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_20.n_101-vs-SALL2-201.alignment counts-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-201/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_21.n_97-vs-SALL2-201.alignment counts-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-201/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_22.n_92-vs-SALL2-201.alignment counts-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-201/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_23.n_83-vs-SALL2-201.alignment counts-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-201/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_24.n_83-vs-SALL2-201.alignment counts-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-201/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_25.n_70-vs-SALL2-201.alignment counts-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-201/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_26.n_49-vs-SALL2-201.alignment counts-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-201/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_27.n_46-vs-SALL2-201.alignment counts-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-201/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_28.n_34-vs-SALL2-201.alignment counts-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-201/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_2.n_1344-vs-SALL2-201.alignment counts-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-201/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_3.n_1320-vs-SALL2-201.alignment counts-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-201/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_4.n_839-vs-SALL2-201.alignment counts-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-201/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_5.n_702-vs-SALL2-201.alignment counts-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-201/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_6.n_655-vs-SALL2-201.alignment counts-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-201/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_7.n_589-vs-SALL2-201.alignment counts-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-201/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_8.n_587-vs-SALL2-201.alignment counts-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-201/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_9.n_535-vs-SALL2-201.alignment counts-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-204/pos_patterns.ENCSR044FMM_ChIP_SALL2_HEK293_ENCSR497PXH_counts_pattern_0.n_525-vs-SALL2-204.alignment counts-znf_b1h_alignment/SALL2-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-204/pos_patterns.ENCSR044FMM_ChIP_SALL2_HEK293_ENCSR497PXH_counts_pattern_1.n_157-vs-SALL2-204.alignment counts-znf_b1h_alignment/SALL2-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-204/pos_patterns.ENCSR044FMM_ChIP_SALL2_HEK293_ENCSR497PXH_counts_pattern_2.n_65-vs-SALL2-204.alignment counts-znf_b1h_alignment/SALL2-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-204/pos_patterns.ENCSR044FMM_ChIP_SALL2_HEK293_ENCSR497PXH_counts_pattern_3.n_51-vs-SALL2-204.alignment counts-znf_b1h_alignment/SALL2-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-204/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_0.n_2551-vs-SALL2-204.alignment counts-znf_b1h_alignment/SALL2-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-204/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_10.n_456-vs-SALL2-204.alignment counts-znf_b1h_alignment/SALL2-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-204/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_11.n_327-vs-SALL2-204.alignment counts-znf_b1h_alignment/SALL2-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-204/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_12.n_291-vs-SALL2-204.alignment counts-znf_b1h_alignment/SALL2-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-204/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_13.n_271-vs-SALL2-204.alignment counts-znf_b1h_alignment/SALL2-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-204/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_14.n_252-vs-SALL2-204.alignment counts-znf_b1h_alignment/SALL2-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-204/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_15.n_195-vs-SALL2-204.alignment counts-znf_b1h_alignment/SALL2-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-204/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_16.n_180-vs-SALL2-204.alignment counts-znf_b1h_alignment/SALL2-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-204/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_17.n_154-vs-SALL2-204.alignment counts-znf_b1h_alignment/SALL2-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-204/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_18.n_135-vs-SALL2-204.alignment counts-znf_b1h_alignment/SALL2-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-204/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_19.n_105-vs-SALL2-204.alignment counts-znf_b1h_alignment/SALL2-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-204/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_1.n_2442-vs-SALL2-204.alignment counts-znf_b1h_alignment/SALL2-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-204/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_20.n_101-vs-SALL2-204.alignment counts-znf_b1h_alignment/SALL2-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-204/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_21.n_97-vs-SALL2-204.alignment counts-znf_b1h_alignment/SALL2-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-204/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_22.n_92-vs-SALL2-204.alignment counts-znf_b1h_alignment/SALL2-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-204/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_23.n_83-vs-SALL2-204.alignment counts-znf_b1h_alignment/SALL2-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-204/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_24.n_83-vs-SALL2-204.alignment counts-znf_b1h_alignment/SALL2-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-204/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_25.n_70-vs-SALL2-204.alignment counts-znf_b1h_alignment/SALL2-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-204/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_26.n_49-vs-SALL2-204.alignment counts-znf_b1h_alignment/SALL2-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-204/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_27.n_46-vs-SALL2-204.alignment counts-znf_b1h_alignment/SALL2-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-204/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_28.n_34-vs-SALL2-204.alignment counts-znf_b1h_alignment/SALL2-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-204/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_2.n_1344-vs-SALL2-204.alignment counts-znf_b1h_alignment/SALL2-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-204/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_3.n_1320-vs-SALL2-204.alignment counts-znf_b1h_alignment/SALL2-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-204/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_4.n_839-vs-SALL2-204.alignment counts-znf_b1h_alignment/SALL2-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-204/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_5.n_702-vs-SALL2-204.alignment counts-znf_b1h_alignment/SALL2-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-204/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_6.n_655-vs-SALL2-204.alignment counts-znf_b1h_alignment/SALL2-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-204/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_7.n_589-vs-SALL2-204.alignment counts-znf_b1h_alignment/SALL2-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-204/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_8.n_587-vs-SALL2-204.alignment counts-znf_b1h_alignment/SALL2-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SALL2-204/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_counts_pattern_9.n_535-vs-SALL2-204.alignment counts-znf_b1h_alignment/SALL2-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SCRT1-201/Hughes_GR_models_SCRT1_counts-neg.pattern_0.n_259-vs-SCRT1-201.alignment counts-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SCRT1-201/Hughes_GR_models_SCRT1_counts-neg.pattern_1.n_51-vs-SCRT1-201.alignment counts-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SCRT1-201/Hughes_GR_models_SCRT1_counts-neg.pattern_2.n_44-vs-SCRT1-201.alignment counts-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SCRT1-201/Hughes_GR_models_SCRT1_counts-neg.pattern_3.n_43-vs-SCRT1-201.alignment counts-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SCRT1-201/Hughes_GR_models_SCRT1_counts-pos.pattern_0.n_21588-vs-SCRT1-201.alignment counts-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SCRT1-201/Hughes_GR_models_SCRT1_counts-pos.pattern_1.n_638-vs-SCRT1-201.alignment counts-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SCRT1-201/Hughes_GR_models_SCRT1_counts-pos.pattern_2.n_508-vs-SCRT1-201.alignment counts-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SCRT1-201/Hughes_GR_models_SCRT1_counts-pos.pattern_3.n_189-vs-SCRT1-201.alignment counts-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SCRT1-201/Hughes_GR_models_SCRT1_counts-pos.pattern_4.n_117-vs-SCRT1-201.alignment counts-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SCRT1-201/Hughes_GR_models_SCRT1_counts-pos.pattern_5.n_62-vs-SCRT1-201.alignment counts-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SCRT1-201/Hughes_GR_models_SCRT1_counts-pos.pattern_6.n_59-vs-SCRT1-201.alignment counts-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SCRT1-201/Hughes_GR_models_SCRT1_counts-pos.pattern_7.n_31-vs-SCRT1-201.alignment counts-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SCRT1-201/pos_patterns.ENCSR605MGM_ChIP_SCRT1_HEK293_ENCSR372ZFV_counts_pattern_0.n_21282-vs-SCRT1-201.alignment counts-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SCRT1-201/pos_patterns.ENCSR605MGM_ChIP_SCRT1_HEK293_ENCSR372ZFV_counts_pattern_10.n_29-vs-SCRT1-201.alignment counts-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SCRT1-201/pos_patterns.ENCSR605MGM_ChIP_SCRT1_HEK293_ENCSR372ZFV_counts_pattern_1.n_602-vs-SCRT1-201.alignment counts-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SCRT1-201/pos_patterns.ENCSR605MGM_ChIP_SCRT1_HEK293_ENCSR372ZFV_counts_pattern_2.n_320-vs-SCRT1-201.alignment counts-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SCRT1-201/pos_patterns.ENCSR605MGM_ChIP_SCRT1_HEK293_ENCSR372ZFV_counts_pattern_3.n_279-vs-SCRT1-201.alignment counts-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SCRT1-201/pos_patterns.ENCSR605MGM_ChIP_SCRT1_HEK293_ENCSR372ZFV_counts_pattern_4.n_271-vs-SCRT1-201.alignment counts-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SCRT1-201/pos_patterns.ENCSR605MGM_ChIP_SCRT1_HEK293_ENCSR372ZFV_counts_pattern_5.n_154-vs-SCRT1-201.alignment counts-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SCRT1-201/pos_patterns.ENCSR605MGM_ChIP_SCRT1_HEK293_ENCSR372ZFV_counts_pattern_6.n_56-vs-SCRT1-201.alignment counts-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SCRT1-201/pos_patterns.ENCSR605MGM_ChIP_SCRT1_HEK293_ENCSR372ZFV_counts_pattern_7.n_49-vs-SCRT1-201.alignment counts-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SCRT1-201/pos_patterns.ENCSR605MGM_ChIP_SCRT1_HEK293_ENCSR372ZFV_counts_pattern_8.n_33-vs-SCRT1-201.alignment counts-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SCRT1-201/pos_patterns.ENCSR605MGM_ChIP_SCRT1_HEK293_ENCSR372ZFV_counts_pattern_9.n_32-vs-SCRT1-201.alignment counts-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SCRT2-201/pos_patterns.ENCSR338DGO_ChIP_SCRT2_HEK293_ENCSR305GED_counts_pattern_0.n_23219-vs-SCRT2-201.alignment counts-znf_b1h_alignment/SCRT2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SCRT2-201/pos_patterns.ENCSR338DGO_ChIP_SCRT2_HEK293_ENCSR305GED_counts_pattern_10.n_25-vs-SCRT2-201.alignment counts-znf_b1h_alignment/SCRT2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SCRT2-201/pos_patterns.ENCSR338DGO_ChIP_SCRT2_HEK293_ENCSR305GED_counts_pattern_1.n_1053-vs-SCRT2-201.alignment counts-znf_b1h_alignment/SCRT2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SCRT2-201/pos_patterns.ENCSR338DGO_ChIP_SCRT2_HEK293_ENCSR305GED_counts_pattern_2.n_659-vs-SCRT2-201.alignment counts-znf_b1h_alignment/SCRT2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SCRT2-201/pos_patterns.ENCSR338DGO_ChIP_SCRT2_HEK293_ENCSR305GED_counts_pattern_3.n_461-vs-SCRT2-201.alignment counts-znf_b1h_alignment/SCRT2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SCRT2-201/pos_patterns.ENCSR338DGO_ChIP_SCRT2_HEK293_ENCSR305GED_counts_pattern_4.n_418-vs-SCRT2-201.alignment counts-znf_b1h_alignment/SCRT2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SCRT2-201/pos_patterns.ENCSR338DGO_ChIP_SCRT2_HEK293_ENCSR305GED_counts_pattern_5.n_146-vs-SCRT2-201.alignment counts-znf_b1h_alignment/SCRT2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SCRT2-201/pos_patterns.ENCSR338DGO_ChIP_SCRT2_HEK293_ENCSR305GED_counts_pattern_6.n_133-vs-SCRT2-201.alignment counts-znf_b1h_alignment/SCRT2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SCRT2-201/pos_patterns.ENCSR338DGO_ChIP_SCRT2_HEK293_ENCSR305GED_counts_pattern_7.n_86-vs-SCRT2-201.alignment counts-znf_b1h_alignment/SCRT2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SCRT2-201/pos_patterns.ENCSR338DGO_ChIP_SCRT2_HEK293_ENCSR305GED_counts_pattern_8.n_70-vs-SCRT2-201.alignment counts-znf_b1h_alignment/SCRT2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SCRT2-201/pos_patterns.ENCSR338DGO_ChIP_SCRT2_HEK293_ENCSR305GED_counts_pattern_9.n_39-vs-SCRT2-201.alignment counts-znf_b1h_alignment/SCRT2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/Hughes_GR_models_SP1_counts-pos.pattern_0.n_6476-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/Hughes_GR_models_SP1_counts-pos.pattern_1.n_6469-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/Hughes_GR_models_SP1_counts-pos.pattern_2.n_1061-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/Hughes_GR_models_SP1_counts-pos.pattern_3.n_570-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/Hughes_GR_models_SP1_counts-pos.pattern_4.n_344-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/Hughes_GR_models_SP1_counts-pos.pattern_5.n_95-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/Hughes_GR_models_SP1_counts-pos.pattern_6.n_85-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BHK_ChIP_SP1_GM12878_ENCSR095LRJ_counts_pattern_0.n_4678-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BHK_ChIP_SP1_GM12878_ENCSR095LRJ_counts_pattern_1.n_2068-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BHK_ChIP_SP1_GM12878_ENCSR095LRJ_counts_pattern_2.n_1039-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BHK_ChIP_SP1_GM12878_ENCSR095LRJ_counts_pattern_3.n_839-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BHK_ChIP_SP1_GM12878_ENCSR095LRJ_counts_pattern_4.n_273-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BHK_ChIP_SP1_GM12878_ENCSR095LRJ_counts_pattern_5.n_209-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BHK_ChIP_SP1_GM12878_ENCSR095LRJ_counts_pattern_6.n_112-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BHK_ChIP_SP1_GM12878_ENCSR095LRJ_counts_pattern_7.n_103-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BHK_ChIP_SP1_GM12878_ENCSR095LRJ_counts_pattern_8.n_50-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BHK_ChIP_SP1_GM12878_ENCSR095LRJ_counts_pattern_9.n_33-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BIR_ChIP_SP1_H1_ENCSR872UCX_counts_pattern_0.n_4041-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BIR_ChIP_SP1_H1_ENCSR872UCX_counts_pattern_1.n_2748-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BIR_ChIP_SP1_H1_ENCSR872UCX_counts_pattern_2.n_2679-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BIR_ChIP_SP1_H1_ENCSR872UCX_counts_pattern_3.n_962-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BIR_ChIP_SP1_H1_ENCSR872UCX_counts_pattern_4.n_903-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BIR_ChIP_SP1_H1_ENCSR872UCX_counts_pattern_5.n_661-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BIR_ChIP_SP1_H1_ENCSR872UCX_counts_pattern_6.n_269-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BIR_ChIP_SP1_H1_ENCSR872UCX_counts_pattern_7.n_60-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BIR_ChIP_SP1_H1_ENCSR872UCX_counts_pattern_8.n_49-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BIR_ChIP_SP1_H1_ENCSR872UCX_counts_pattern_9.n_49-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BJX_ChIP_SP1_HepG2_ENCSR574YOJ_counts_pattern_0.n_9747-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BJX_ChIP_SP1_HepG2_ENCSR574YOJ_counts_pattern_10.n_227-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BJX_ChIP_SP1_HepG2_ENCSR574YOJ_counts_pattern_11.n_36-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BJX_ChIP_SP1_HepG2_ENCSR574YOJ_counts_pattern_1.n_3260-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BJX_ChIP_SP1_HepG2_ENCSR574YOJ_counts_pattern_2.n_2428-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BJX_ChIP_SP1_HepG2_ENCSR574YOJ_counts_pattern_3.n_2141-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BJX_ChIP_SP1_HepG2_ENCSR574YOJ_counts_pattern_4.n_2092-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BJX_ChIP_SP1_HepG2_ENCSR574YOJ_counts_pattern_5.n_1213-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BJX_ChIP_SP1_HepG2_ENCSR574YOJ_counts_pattern_6.n_894-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BJX_ChIP_SP1_HepG2_ENCSR574YOJ_counts_pattern_7.n_559-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BJX_ChIP_SP1_HepG2_ENCSR574YOJ_counts_pattern_8.n_558-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BJX_ChIP_SP1_HepG2_ENCSR574YOJ_counts_pattern_9.n_263-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BKO_ChIP_SP1_K562_ENCSR807ZPN_counts_pattern_0.n_4135-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BKO_ChIP_SP1_K562_ENCSR807ZPN_counts_pattern_1.n_399-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BKO_ChIP_SP1_K562_ENCSR807ZPN_counts_pattern_2.n_178-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BKO_ChIP_SP1_K562_ENCSR807ZPN_counts_pattern_3.n_90-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BKO_ChIP_SP1_K562_ENCSR807ZPN_counts_pattern_4.n_59-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BKO_ChIP_SP1_K562_ENCSR807ZPN_counts_pattern_5.n_48-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BKO_ChIP_SP1_K562_ENCSR807ZPN_counts_pattern_6.n_28-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BPE_ChIP_SP1_A549_ENCSR165NXF_counts_pattern_0.n_11675-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BPE_ChIP_SP1_A549_ENCSR165NXF_counts_pattern_10.n_618-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BPE_ChIP_SP1_A549_ENCSR165NXF_counts_pattern_11.n_204-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BPE_ChIP_SP1_A549_ENCSR165NXF_counts_pattern_12.n_142-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BPE_ChIP_SP1_A549_ENCSR165NXF_counts_pattern_13.n_61-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BPE_ChIP_SP1_A549_ENCSR165NXF_counts_pattern_14.n_59-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BPE_ChIP_SP1_A549_ENCSR165NXF_counts_pattern_15.n_55-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BPE_ChIP_SP1_A549_ENCSR165NXF_counts_pattern_16.n_46-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BPE_ChIP_SP1_A549_ENCSR165NXF_counts_pattern_17.n_25-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BPE_ChIP_SP1_A549_ENCSR165NXF_counts_pattern_18.n_23-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BPE_ChIP_SP1_A549_ENCSR165NXF_counts_pattern_19.n_21-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BPE_ChIP_SP1_A549_ENCSR165NXF_counts_pattern_1.n_2584-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BPE_ChIP_SP1_A549_ENCSR165NXF_counts_pattern_2.n_2361-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BPE_ChIP_SP1_A549_ENCSR165NXF_counts_pattern_3.n_1702-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BPE_ChIP_SP1_A549_ENCSR165NXF_counts_pattern_4.n_1564-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BPE_ChIP_SP1_A549_ENCSR165NXF_counts_pattern_5.n_1122-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BPE_ChIP_SP1_A549_ENCSR165NXF_counts_pattern_6.n_910-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BPE_ChIP_SP1_A549_ENCSR165NXF_counts_pattern_7.n_857-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BPE_ChIP_SP1_A549_ENCSR165NXF_counts_pattern_8.n_777-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BPE_ChIP_SP1_A549_ENCSR165NXF_counts_pattern_9.n_766-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BSF_ChIP_SP1_HCT116_ENCSR957HMT_counts_pattern_0.n_13403-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BSF_ChIP_SP1_HCT116_ENCSR957HMT_counts_pattern_10.n_23-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BSF_ChIP_SP1_HCT116_ENCSR957HMT_counts_pattern_1.n_2882-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BSF_ChIP_SP1_HCT116_ENCSR957HMT_counts_pattern_2.n_848-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BSF_ChIP_SP1_HCT116_ENCSR957HMT_counts_pattern_3.n_379-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BSF_ChIP_SP1_HCT116_ENCSR957HMT_counts_pattern_4.n_211-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BSF_ChIP_SP1_HCT116_ENCSR957HMT_counts_pattern_5.n_125-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BSF_ChIP_SP1_HCT116_ENCSR957HMT_counts_pattern_6.n_70-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BSF_ChIP_SP1_HCT116_ENCSR957HMT_counts_pattern_7.n_41-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BSF_ChIP_SP1_HCT116_ENCSR957HMT_counts_pattern_8.n_32-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR000BSF_ChIP_SP1_HCT116_ENCSR957HMT_counts_pattern_9.n_24-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR085IXF_ChIP_SP1_liver_ENCSR730HDS_counts_pattern_0.n_16432-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR085IXF_ChIP_SP1_liver_ENCSR730HDS_counts_pattern_10.n_117-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR085IXF_ChIP_SP1_liver_ENCSR730HDS_counts_pattern_11.n_117-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR085IXF_ChIP_SP1_liver_ENCSR730HDS_counts_pattern_12.n_80-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR085IXF_ChIP_SP1_liver_ENCSR730HDS_counts_pattern_13.n_74-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR085IXF_ChIP_SP1_liver_ENCSR730HDS_counts_pattern_14.n_48-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR085IXF_ChIP_SP1_liver_ENCSR730HDS_counts_pattern_15.n_36-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR085IXF_ChIP_SP1_liver_ENCSR730HDS_counts_pattern_16.n_34-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR085IXF_ChIP_SP1_liver_ENCSR730HDS_counts_pattern_17.n_32-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR085IXF_ChIP_SP1_liver_ENCSR730HDS_counts_pattern_18.n_28-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR085IXF_ChIP_SP1_liver_ENCSR730HDS_counts_pattern_19.n_24-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR085IXF_ChIP_SP1_liver_ENCSR730HDS_counts_pattern_1.n_10129-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR085IXF_ChIP_SP1_liver_ENCSR730HDS_counts_pattern_20.n_21-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR085IXF_ChIP_SP1_liver_ENCSR730HDS_counts_pattern_21.n_20-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR085IXF_ChIP_SP1_liver_ENCSR730HDS_counts_pattern_2.n_5538-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR085IXF_ChIP_SP1_liver_ENCSR730HDS_counts_pattern_3.n_5186-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR085IXF_ChIP_SP1_liver_ENCSR730HDS_counts_pattern_4.n_1493-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR085IXF_ChIP_SP1_liver_ENCSR730HDS_counts_pattern_5.n_446-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR085IXF_ChIP_SP1_liver_ENCSR730HDS_counts_pattern_6.n_401-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR085IXF_ChIP_SP1_liver_ENCSR730HDS_counts_pattern_7.n_299-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR085IXF_ChIP_SP1_liver_ENCSR730HDS_counts_pattern_8.n_212-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR085IXF_ChIP_SP1_liver_ENCSR730HDS_counts_pattern_9.n_157-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR334KIQ_ChIP_SP1_HepG2_ENCSR359WFD_counts_pattern_0.n_521-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR334KIQ_ChIP_SP1_HepG2_ENCSR359WFD_counts_pattern_1.n_323-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR334KIQ_ChIP_SP1_HepG2_ENCSR359WFD_counts_pattern_2.n_135-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR334KIQ_ChIP_SP1_HepG2_ENCSR359WFD_counts_pattern_3.n_119-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR334KIQ_ChIP_SP1_HepG2_ENCSR359WFD_counts_pattern_4.n_59-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR334KIQ_ChIP_SP1_HepG2_ENCSR359WFD_counts_pattern_5.n_58-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR372IML_ChIP_SP1_K562_ENCSR955QBD_counts_pattern_0.n_7353-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR372IML_ChIP_SP1_K562_ENCSR955QBD_counts_pattern_10.n_44-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR372IML_ChIP_SP1_K562_ENCSR955QBD_counts_pattern_11.n_41-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR372IML_ChIP_SP1_K562_ENCSR955QBD_counts_pattern_1.n_2467-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR372IML_ChIP_SP1_K562_ENCSR955QBD_counts_pattern_2.n_257-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR372IML_ChIP_SP1_K562_ENCSR955QBD_counts_pattern_3.n_138-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR372IML_ChIP_SP1_K562_ENCSR955QBD_counts_pattern_4.n_129-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR372IML_ChIP_SP1_K562_ENCSR955QBD_counts_pattern_5.n_128-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR372IML_ChIP_SP1_K562_ENCSR955QBD_counts_pattern_6.n_102-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR372IML_ChIP_SP1_K562_ENCSR955QBD_counts_pattern_7.n_86-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR372IML_ChIP_SP1_K562_ENCSR955QBD_counts_pattern_8.n_67-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR372IML_ChIP_SP1_K562_ENCSR955QBD_counts_pattern_9.n_53-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR386YIH_ChIP_SP1_liver_ENCSR764SPF_counts_pattern_0.n_18936-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR386YIH_ChIP_SP1_liver_ENCSR764SPF_counts_pattern_10.n_143-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR386YIH_ChIP_SP1_liver_ENCSR764SPF_counts_pattern_11.n_134-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR386YIH_ChIP_SP1_liver_ENCSR764SPF_counts_pattern_12.n_89-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR386YIH_ChIP_SP1_liver_ENCSR764SPF_counts_pattern_13.n_84-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR386YIH_ChIP_SP1_liver_ENCSR764SPF_counts_pattern_14.n_81-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR386YIH_ChIP_SP1_liver_ENCSR764SPF_counts_pattern_15.n_50-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR386YIH_ChIP_SP1_liver_ENCSR764SPF_counts_pattern_1.n_4981-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR386YIH_ChIP_SP1_liver_ENCSR764SPF_counts_pattern_2.n_4877-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR386YIH_ChIP_SP1_liver_ENCSR764SPF_counts_pattern_3.n_4457-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR386YIH_ChIP_SP1_liver_ENCSR764SPF_counts_pattern_4.n_1300-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR386YIH_ChIP_SP1_liver_ENCSR764SPF_counts_pattern_5.n_1084-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR386YIH_ChIP_SP1_liver_ENCSR764SPF_counts_pattern_6.n_997-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR386YIH_ChIP_SP1_liver_ENCSR764SPF_counts_pattern_7.n_804-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR386YIH_ChIP_SP1_liver_ENCSR764SPF_counts_pattern_8.n_404-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR386YIH_ChIP_SP1_liver_ENCSR764SPF_counts_pattern_9.n_372-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR460YAM_ChIP_SP1_HepG2_ENCSR981BPZ_counts_pattern_0.n_5373-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR460YAM_ChIP_SP1_HepG2_ENCSR981BPZ_counts_pattern_1.n_666-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR460YAM_ChIP_SP1_HepG2_ENCSR981BPZ_counts_pattern_2.n_225-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR460YAM_ChIP_SP1_HepG2_ENCSR981BPZ_counts_pattern_3.n_139-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR460YAM_ChIP_SP1_HepG2_ENCSR981BPZ_counts_pattern_4.n_136-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR460YAM_ChIP_SP1_HepG2_ENCSR981BPZ_counts_pattern_5.n_97-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR460YAM_ChIP_SP1_HepG2_ENCSR981BPZ_counts_pattern_6.n_34-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR583CGO_ChIP_SP1_WTC11_ENCSR786LMT_counts_pattern_0.n_7137-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR583CGO_ChIP_SP1_WTC11_ENCSR786LMT_counts_pattern_10.n_105-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR583CGO_ChIP_SP1_WTC11_ENCSR786LMT_counts_pattern_11.n_52-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR583CGO_ChIP_SP1_WTC11_ENCSR786LMT_counts_pattern_12.n_41-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR583CGO_ChIP_SP1_WTC11_ENCSR786LMT_counts_pattern_13.n_39-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR583CGO_ChIP_SP1_WTC11_ENCSR786LMT_counts_pattern_14.n_33-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR583CGO_ChIP_SP1_WTC11_ENCSR786LMT_counts_pattern_15.n_24-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR583CGO_ChIP_SP1_WTC11_ENCSR786LMT_counts_pattern_1.n_2039-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR583CGO_ChIP_SP1_WTC11_ENCSR786LMT_counts_pattern_2.n_429-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR583CGO_ChIP_SP1_WTC11_ENCSR786LMT_counts_pattern_3.n_353-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR583CGO_ChIP_SP1_WTC11_ENCSR786LMT_counts_pattern_4.n_320-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR583CGO_ChIP_SP1_WTC11_ENCSR786LMT_counts_pattern_5.n_300-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR583CGO_ChIP_SP1_WTC11_ENCSR786LMT_counts_pattern_6.n_242-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR583CGO_ChIP_SP1_WTC11_ENCSR786LMT_counts_pattern_7.n_208-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR583CGO_ChIP_SP1_WTC11_ENCSR786LMT_counts_pattern_8.n_181-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR583CGO_ChIP_SP1_WTC11_ENCSR786LMT_counts_pattern_9.n_167-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR729LGA_ChIP_SP1_MCF-7_ENCSR543HQM_counts_pattern_0.n_692-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR729LGA_ChIP_SP1_MCF-7_ENCSR543HQM_counts_pattern_1.n_521-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR729LGA_ChIP_SP1_MCF-7_ENCSR543HQM_counts_pattern_2.n_138-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR729LGA_ChIP_SP1_MCF-7_ENCSR543HQM_counts_pattern_3.n_83-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR729LGA_ChIP_SP1_MCF-7_ENCSR543HQM_counts_pattern_4.n_58-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR729LGA_ChIP_SP1_MCF-7_ENCSR543HQM_counts_pattern_5.n_53-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR906PEI_ChIP_SP1_HEK293T_ENCSR172ILE_counts_pattern_0.n_706-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR906PEI_ChIP_SP1_HEK293T_ENCSR172ILE_counts_pattern_1.n_42-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR991ELG_ChIP_SP1_K562_ENCSR790HBQ_counts_pattern_0.n_8871-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR991ELG_ChIP_SP1_K562_ENCSR790HBQ_counts_pattern_10.n_47-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR991ELG_ChIP_SP1_K562_ENCSR790HBQ_counts_pattern_11.n_40-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR991ELG_ChIP_SP1_K562_ENCSR790HBQ_counts_pattern_1.n_1499-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR991ELG_ChIP_SP1_K562_ENCSR790HBQ_counts_pattern_2.n_806-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR991ELG_ChIP_SP1_K562_ENCSR790HBQ_counts_pattern_3.n_250-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR991ELG_ChIP_SP1_K562_ENCSR790HBQ_counts_pattern_4.n_245-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR991ELG_ChIP_SP1_K562_ENCSR790HBQ_counts_pattern_5.n_117-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR991ELG_ChIP_SP1_K562_ENCSR790HBQ_counts_pattern_6.n_71-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR991ELG_ChIP_SP1_K562_ENCSR790HBQ_counts_pattern_7.n_68-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR991ELG_ChIP_SP1_K562_ENCSR790HBQ_counts_pattern_8.n_64-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR991ELG_ChIP_SP1_K562_ENCSR790HBQ_counts_pattern_9.n_58-vs-SP1-201.alignment counts-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/Hughes_GR_models_SP2_counts-pos.pattern_0.n_11326-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/Hughes_GR_models_SP2_counts-pos.pattern_1.n_1703-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/Hughes_GR_models_SP2_counts-pos.pattern_2.n_718-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/Hughes_GR_models_SP2_counts-pos.pattern_3.n_232-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/Hughes_GR_models_SP2_counts-pos.pattern_4.n_212-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/Hughes_GR_models_SP2_counts-pos.pattern_5.n_110-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/Hughes_GR_models_SP2_counts-pos.pattern_6.n_102-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/Hughes_GR_models_SP2_counts-pos.pattern_7.n_81-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/Hughes_GR_models_SP2_counts-pos.pattern_8.n_28-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/neg_patterns.ENCSR946RZN_ChIP_SP2_HepG2_ENCSR052HWR_counts_pattern_0.n_37-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR000BNL_ChIP_SP2_K562_ENCSR578OAK_counts_pattern_0.n_1903-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR000BNL_ChIP_SP2_K562_ENCSR578OAK_counts_pattern_1.n_344-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR000BNL_ChIP_SP2_K562_ENCSR578OAK_counts_pattern_2.n_153-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR000BNL_ChIP_SP2_K562_ENCSR578OAK_counts_pattern_3.n_36-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR000BNL_ChIP_SP2_K562_ENCSR578OAK_counts_pattern_4.n_32-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR000BOU_ChIP_SP2_HepG2_ENCSR280UXF_counts_pattern_0.n_416-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR000BOU_ChIP_SP2_HepG2_ENCSR280UXF_counts_pattern_1.n_109-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR000BOU_ChIP_SP2_HepG2_ENCSR280UXF_counts_pattern_2.n_84-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR000BOU_ChIP_SP2_HepG2_ENCSR280UXF_counts_pattern_3.n_71-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR000BOU_ChIP_SP2_HepG2_ENCSR280UXF_counts_pattern_4.n_57-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR000BOU_ChIP_SP2_HepG2_ENCSR280UXF_counts_pattern_5.n_51-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR000BOU_ChIP_SP2_HepG2_ENCSR280UXF_counts_pattern_6.n_51-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR000BOU_ChIP_SP2_HepG2_ENCSR280UXF_counts_pattern_7.n_37-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR000BOU_ChIP_SP2_HepG2_ENCSR280UXF_counts_pattern_8.n_35-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR000BOU_ChIP_SP2_HepG2_ENCSR280UXF_counts_pattern_9.n_23-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR000BQG_ChIP_SP2_H1_ENCSR530ZGY_counts_pattern_0.n_1266-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR000BQG_ChIP_SP2_H1_ENCSR530ZGY_counts_pattern_1.n_305-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR000BQG_ChIP_SP2_H1_ENCSR530ZGY_counts_pattern_2.n_150-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR000BQG_ChIP_SP2_H1_ENCSR530ZGY_counts_pattern_3.n_36-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR000BQG_ChIP_SP2_H1_ENCSR530ZGY_counts_pattern_4.n_23-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR807LQP_ChIP_SP2_HEK293_ENCSR154LJQ_counts_pattern_0.n_8725-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR807LQP_ChIP_SP2_HEK293_ENCSR154LJQ_counts_pattern_10.n_48-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR807LQP_ChIP_SP2_HEK293_ENCSR154LJQ_counts_pattern_11.n_42-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR807LQP_ChIP_SP2_HEK293_ENCSR154LJQ_counts_pattern_12.n_27-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR807LQP_ChIP_SP2_HEK293_ENCSR154LJQ_counts_pattern_1.n_4491-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR807LQP_ChIP_SP2_HEK293_ENCSR154LJQ_counts_pattern_2.n_2370-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR807LQP_ChIP_SP2_HEK293_ENCSR154LJQ_counts_pattern_3.n_322-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR807LQP_ChIP_SP2_HEK293_ENCSR154LJQ_counts_pattern_4.n_279-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR807LQP_ChIP_SP2_HEK293_ENCSR154LJQ_counts_pattern_5.n_240-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR807LQP_ChIP_SP2_HEK293_ENCSR154LJQ_counts_pattern_6.n_234-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR807LQP_ChIP_SP2_HEK293_ENCSR154LJQ_counts_pattern_7.n_171-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR807LQP_ChIP_SP2_HEK293_ENCSR154LJQ_counts_pattern_8.n_109-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR807LQP_ChIP_SP2_HEK293_ENCSR154LJQ_counts_pattern_9.n_97-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR946RZN_ChIP_SP2_HepG2_ENCSR052HWR_counts_pattern_0.n_5703-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR946RZN_ChIP_SP2_HepG2_ENCSR052HWR_counts_pattern_1.n_2607-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR946RZN_ChIP_SP2_HepG2_ENCSR052HWR_counts_pattern_2.n_1749-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR946RZN_ChIP_SP2_HepG2_ENCSR052HWR_counts_pattern_3.n_622-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR946RZN_ChIP_SP2_HepG2_ENCSR052HWR_counts_pattern_4.n_263-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR946RZN_ChIP_SP2_HepG2_ENCSR052HWR_counts_pattern_5.n_59-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR946RZN_ChIP_SP2_HepG2_ENCSR052HWR_counts_pattern_6.n_34-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR946RZN_ChIP_SP2_HepG2_ENCSR052HWR_counts_pattern_7.n_32-vs-SP2-201.alignment counts-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP3-201/pos_patterns.ENCSR141PZA_ChIP_SP3_HEK293_ENCSR640UGN_counts_pattern_0.n_13740-vs-SP3-201.alignment counts-znf_b1h_alignment/SP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP3-201/pos_patterns.ENCSR141PZA_ChIP_SP3_HEK293_ENCSR640UGN_counts_pattern_10.n_230-vs-SP3-201.alignment counts-znf_b1h_alignment/SP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP3-201/pos_patterns.ENCSR141PZA_ChIP_SP3_HEK293_ENCSR640UGN_counts_pattern_11.n_152-vs-SP3-201.alignment counts-znf_b1h_alignment/SP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP3-201/pos_patterns.ENCSR141PZA_ChIP_SP3_HEK293_ENCSR640UGN_counts_pattern_12.n_120-vs-SP3-201.alignment counts-znf_b1h_alignment/SP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP3-201/pos_patterns.ENCSR141PZA_ChIP_SP3_HEK293_ENCSR640UGN_counts_pattern_13.n_49-vs-SP3-201.alignment counts-znf_b1h_alignment/SP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP3-201/pos_patterns.ENCSR141PZA_ChIP_SP3_HEK293_ENCSR640UGN_counts_pattern_14.n_38-vs-SP3-201.alignment counts-znf_b1h_alignment/SP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP3-201/pos_patterns.ENCSR141PZA_ChIP_SP3_HEK293_ENCSR640UGN_counts_pattern_1.n_1333-vs-SP3-201.alignment counts-znf_b1h_alignment/SP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP3-201/pos_patterns.ENCSR141PZA_ChIP_SP3_HEK293_ENCSR640UGN_counts_pattern_2.n_1124-vs-SP3-201.alignment counts-znf_b1h_alignment/SP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP3-201/pos_patterns.ENCSR141PZA_ChIP_SP3_HEK293_ENCSR640UGN_counts_pattern_3.n_982-vs-SP3-201.alignment counts-znf_b1h_alignment/SP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP3-201/pos_patterns.ENCSR141PZA_ChIP_SP3_HEK293_ENCSR640UGN_counts_pattern_4.n_670-vs-SP3-201.alignment counts-znf_b1h_alignment/SP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP3-201/pos_patterns.ENCSR141PZA_ChIP_SP3_HEK293_ENCSR640UGN_counts_pattern_5.n_652-vs-SP3-201.alignment counts-znf_b1h_alignment/SP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP3-201/pos_patterns.ENCSR141PZA_ChIP_SP3_HEK293_ENCSR640UGN_counts_pattern_6.n_648-vs-SP3-201.alignment counts-znf_b1h_alignment/SP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP3-201/pos_patterns.ENCSR141PZA_ChIP_SP3_HEK293_ENCSR640UGN_counts_pattern_7.n_459-vs-SP3-201.alignment counts-znf_b1h_alignment/SP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP3-201/pos_patterns.ENCSR141PZA_ChIP_SP3_HEK293_ENCSR640UGN_counts_pattern_8.n_394-vs-SP3-201.alignment counts-znf_b1h_alignment/SP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP3-201/pos_patterns.ENCSR141PZA_ChIP_SP3_HEK293_ENCSR640UGN_counts_pattern_9.n_369-vs-SP3-201.alignment counts-znf_b1h_alignment/SP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP3-205/pos_patterns.ENCSR141PZA_ChIP_SP3_HEK293_ENCSR640UGN_counts_pattern_0.n_13740-vs-SP3-205.alignment counts-znf_b1h_alignment/SP3-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP3-205/pos_patterns.ENCSR141PZA_ChIP_SP3_HEK293_ENCSR640UGN_counts_pattern_10.n_230-vs-SP3-205.alignment counts-znf_b1h_alignment/SP3-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP3-205/pos_patterns.ENCSR141PZA_ChIP_SP3_HEK293_ENCSR640UGN_counts_pattern_11.n_152-vs-SP3-205.alignment counts-znf_b1h_alignment/SP3-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP3-205/pos_patterns.ENCSR141PZA_ChIP_SP3_HEK293_ENCSR640UGN_counts_pattern_12.n_120-vs-SP3-205.alignment counts-znf_b1h_alignment/SP3-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP3-205/pos_patterns.ENCSR141PZA_ChIP_SP3_HEK293_ENCSR640UGN_counts_pattern_13.n_49-vs-SP3-205.alignment counts-znf_b1h_alignment/SP3-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP3-205/pos_patterns.ENCSR141PZA_ChIP_SP3_HEK293_ENCSR640UGN_counts_pattern_14.n_38-vs-SP3-205.alignment counts-znf_b1h_alignment/SP3-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP3-205/pos_patterns.ENCSR141PZA_ChIP_SP3_HEK293_ENCSR640UGN_counts_pattern_1.n_1333-vs-SP3-205.alignment counts-znf_b1h_alignment/SP3-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP3-205/pos_patterns.ENCSR141PZA_ChIP_SP3_HEK293_ENCSR640UGN_counts_pattern_2.n_1124-vs-SP3-205.alignment counts-znf_b1h_alignment/SP3-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP3-205/pos_patterns.ENCSR141PZA_ChIP_SP3_HEK293_ENCSR640UGN_counts_pattern_3.n_982-vs-SP3-205.alignment counts-znf_b1h_alignment/SP3-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP3-205/pos_patterns.ENCSR141PZA_ChIP_SP3_HEK293_ENCSR640UGN_counts_pattern_4.n_670-vs-SP3-205.alignment counts-znf_b1h_alignment/SP3-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP3-205/pos_patterns.ENCSR141PZA_ChIP_SP3_HEK293_ENCSR640UGN_counts_pattern_5.n_652-vs-SP3-205.alignment counts-znf_b1h_alignment/SP3-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP3-205/pos_patterns.ENCSR141PZA_ChIP_SP3_HEK293_ENCSR640UGN_counts_pattern_6.n_648-vs-SP3-205.alignment counts-znf_b1h_alignment/SP3-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP3-205/pos_patterns.ENCSR141PZA_ChIP_SP3_HEK293_ENCSR640UGN_counts_pattern_7.n_459-vs-SP3-205.alignment counts-znf_b1h_alignment/SP3-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP3-205/pos_patterns.ENCSR141PZA_ChIP_SP3_HEK293_ENCSR640UGN_counts_pattern_8.n_394-vs-SP3-205.alignment counts-znf_b1h_alignment/SP3-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP3-205/pos_patterns.ENCSR141PZA_ChIP_SP3_HEK293_ENCSR640UGN_counts_pattern_9.n_369-vs-SP3-205.alignment counts-znf_b1h_alignment/SP3-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP4-201/Hughes_GR_models_SP4_counts-pos.pattern_0.n_7906-vs-SP4-201.alignment counts-znf_b1h_alignment/SP4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP4-201/Hughes_GR_models_SP4_counts-pos.pattern_10.n_184-vs-SP4-201.alignment counts-znf_b1h_alignment/SP4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP4-201/Hughes_GR_models_SP4_counts-pos.pattern_11.n_171-vs-SP4-201.alignment counts-znf_b1h_alignment/SP4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP4-201/Hughes_GR_models_SP4_counts-pos.pattern_12.n_168-vs-SP4-201.alignment counts-znf_b1h_alignment/SP4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP4-201/Hughes_GR_models_SP4_counts-pos.pattern_13.n_149-vs-SP4-201.alignment counts-znf_b1h_alignment/SP4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP4-201/Hughes_GR_models_SP4_counts-pos.pattern_14.n_130-vs-SP4-201.alignment counts-znf_b1h_alignment/SP4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP4-201/Hughes_GR_models_SP4_counts-pos.pattern_15.n_47-vs-SP4-201.alignment counts-znf_b1h_alignment/SP4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP4-201/Hughes_GR_models_SP4_counts-pos.pattern_16.n_43-vs-SP4-201.alignment counts-znf_b1h_alignment/SP4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP4-201/Hughes_GR_models_SP4_counts-pos.pattern_1.n_1085-vs-SP4-201.alignment counts-znf_b1h_alignment/SP4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP4-201/Hughes_GR_models_SP4_counts-pos.pattern_2.n_728-vs-SP4-201.alignment counts-znf_b1h_alignment/SP4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP4-201/Hughes_GR_models_SP4_counts-pos.pattern_3.n_544-vs-SP4-201.alignment counts-znf_b1h_alignment/SP4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP4-201/Hughes_GR_models_SP4_counts-pos.pattern_4.n_447-vs-SP4-201.alignment counts-znf_b1h_alignment/SP4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP4-201/Hughes_GR_models_SP4_counts-pos.pattern_5.n_288-vs-SP4-201.alignment counts-znf_b1h_alignment/SP4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP4-201/Hughes_GR_models_SP4_counts-pos.pattern_6.n_269-vs-SP4-201.alignment counts-znf_b1h_alignment/SP4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP4-201/Hughes_GR_models_SP4_counts-pos.pattern_7.n_235-vs-SP4-201.alignment counts-znf_b1h_alignment/SP4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP4-201/Hughes_GR_models_SP4_counts-pos.pattern_8.n_231-vs-SP4-201.alignment counts-znf_b1h_alignment/SP4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP4-201/Hughes_GR_models_SP4_counts-pos.pattern_9.n_217-vs-SP4-201.alignment counts-znf_b1h_alignment/SP4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP4-201/pos_patterns.ENCSR000BQV_ChIP_SP4_H1_ENCSR649EJS_counts_pattern_0.n_3978-vs-SP4-201.alignment counts-znf_b1h_alignment/SP4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP4-201/pos_patterns.ENCSR000BQV_ChIP_SP4_H1_ENCSR649EJS_counts_pattern_1.n_375-vs-SP4-201.alignment counts-znf_b1h_alignment/SP4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP4-201/pos_patterns.ENCSR000BQV_ChIP_SP4_H1_ENCSR649EJS_counts_pattern_2.n_116-vs-SP4-201.alignment counts-znf_b1h_alignment/SP4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP4-201/pos_patterns.ENCSR000BQV_ChIP_SP4_H1_ENCSR649EJS_counts_pattern_3.n_76-vs-SP4-201.alignment counts-znf_b1h_alignment/SP4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP4-201/pos_patterns.ENCSR000BQV_ChIP_SP4_H1_ENCSR649EJS_counts_pattern_4.n_43-vs-SP4-201.alignment counts-znf_b1h_alignment/SP4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP4-201/pos_patterns.ENCSR642PQK_ChIP_SP4_HepG2_ENCSR715EEU_counts_pattern_0.n_8983-vs-SP4-201.alignment counts-znf_b1h_alignment/SP4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP4-201/pos_patterns.ENCSR642PQK_ChIP_SP4_HepG2_ENCSR715EEU_counts_pattern_10.n_67-vs-SP4-201.alignment counts-znf_b1h_alignment/SP4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP4-201/pos_patterns.ENCSR642PQK_ChIP_SP4_HepG2_ENCSR715EEU_counts_pattern_11.n_64-vs-SP4-201.alignment counts-znf_b1h_alignment/SP4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP4-201/pos_patterns.ENCSR642PQK_ChIP_SP4_HepG2_ENCSR715EEU_counts_pattern_12.n_49-vs-SP4-201.alignment counts-znf_b1h_alignment/SP4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP4-201/pos_patterns.ENCSR642PQK_ChIP_SP4_HepG2_ENCSR715EEU_counts_pattern_13.n_49-vs-SP4-201.alignment counts-znf_b1h_alignment/SP4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP4-201/pos_patterns.ENCSR642PQK_ChIP_SP4_HepG2_ENCSR715EEU_counts_pattern_14.n_36-vs-SP4-201.alignment counts-znf_b1h_alignment/SP4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP4-201/pos_patterns.ENCSR642PQK_ChIP_SP4_HepG2_ENCSR715EEU_counts_pattern_15.n_34-vs-SP4-201.alignment counts-znf_b1h_alignment/SP4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP4-201/pos_patterns.ENCSR642PQK_ChIP_SP4_HepG2_ENCSR715EEU_counts_pattern_1.n_2322-vs-SP4-201.alignment counts-znf_b1h_alignment/SP4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP4-201/pos_patterns.ENCSR642PQK_ChIP_SP4_HepG2_ENCSR715EEU_counts_pattern_2.n_663-vs-SP4-201.alignment counts-znf_b1h_alignment/SP4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP4-201/pos_patterns.ENCSR642PQK_ChIP_SP4_HepG2_ENCSR715EEU_counts_pattern_3.n_296-vs-SP4-201.alignment counts-znf_b1h_alignment/SP4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP4-201/pos_patterns.ENCSR642PQK_ChIP_SP4_HepG2_ENCSR715EEU_counts_pattern_4.n_294-vs-SP4-201.alignment counts-znf_b1h_alignment/SP4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP4-201/pos_patterns.ENCSR642PQK_ChIP_SP4_HepG2_ENCSR715EEU_counts_pattern_5.n_275-vs-SP4-201.alignment counts-znf_b1h_alignment/SP4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP4-201/pos_patterns.ENCSR642PQK_ChIP_SP4_HepG2_ENCSR715EEU_counts_pattern_6.n_208-vs-SP4-201.alignment counts-znf_b1h_alignment/SP4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP4-201/pos_patterns.ENCSR642PQK_ChIP_SP4_HepG2_ENCSR715EEU_counts_pattern_7.n_206-vs-SP4-201.alignment counts-znf_b1h_alignment/SP4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP4-201/pos_patterns.ENCSR642PQK_ChIP_SP4_HepG2_ENCSR715EEU_counts_pattern_8.n_127-vs-SP4-201.alignment counts-znf_b1h_alignment/SP4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP4-201/pos_patterns.ENCSR642PQK_ChIP_SP4_HepG2_ENCSR715EEU_counts_pattern_9.n_90-vs-SP4-201.alignment counts-znf_b1h_alignment/SP4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP5-201/pos_patterns.ENCSR019NPF_ChIP_SP5_HepG2_ENCSR773LDV_counts_pattern_0.n_7316-vs-SP5-201.alignment counts-znf_b1h_alignment/SP5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP5-201/pos_patterns.ENCSR019NPF_ChIP_SP5_HepG2_ENCSR773LDV_counts_pattern_10.n_62-vs-SP5-201.alignment counts-znf_b1h_alignment/SP5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP5-201/pos_patterns.ENCSR019NPF_ChIP_SP5_HepG2_ENCSR773LDV_counts_pattern_11.n_29-vs-SP5-201.alignment counts-znf_b1h_alignment/SP5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP5-201/pos_patterns.ENCSR019NPF_ChIP_SP5_HepG2_ENCSR773LDV_counts_pattern_12.n_27-vs-SP5-201.alignment counts-znf_b1h_alignment/SP5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP5-201/pos_patterns.ENCSR019NPF_ChIP_SP5_HepG2_ENCSR773LDV_counts_pattern_1.n_2318-vs-SP5-201.alignment counts-znf_b1h_alignment/SP5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP5-201/pos_patterns.ENCSR019NPF_ChIP_SP5_HepG2_ENCSR773LDV_counts_pattern_2.n_1792-vs-SP5-201.alignment counts-znf_b1h_alignment/SP5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP5-201/pos_patterns.ENCSR019NPF_ChIP_SP5_HepG2_ENCSR773LDV_counts_pattern_3.n_1335-vs-SP5-201.alignment counts-znf_b1h_alignment/SP5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP5-201/pos_patterns.ENCSR019NPF_ChIP_SP5_HepG2_ENCSR773LDV_counts_pattern_4.n_1335-vs-SP5-201.alignment counts-znf_b1h_alignment/SP5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP5-201/pos_patterns.ENCSR019NPF_ChIP_SP5_HepG2_ENCSR773LDV_counts_pattern_5.n_643-vs-SP5-201.alignment counts-znf_b1h_alignment/SP5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP5-201/pos_patterns.ENCSR019NPF_ChIP_SP5_HepG2_ENCSR773LDV_counts_pattern_6.n_567-vs-SP5-201.alignment counts-znf_b1h_alignment/SP5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP5-201/pos_patterns.ENCSR019NPF_ChIP_SP5_HepG2_ENCSR773LDV_counts_pattern_7.n_114-vs-SP5-201.alignment counts-znf_b1h_alignment/SP5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP5-201/pos_patterns.ENCSR019NPF_ChIP_SP5_HepG2_ENCSR773LDV_counts_pattern_8.n_105-vs-SP5-201.alignment counts-znf_b1h_alignment/SP5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP5-201/pos_patterns.ENCSR019NPF_ChIP_SP5_HepG2_ENCSR773LDV_counts_pattern_9.n_68-vs-SP5-201.alignment counts-znf_b1h_alignment/SP5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP7-201/pos_patterns.ENCSR468IJT_ChIP_SP7_HEK293_ENCSR374VXB_counts_pattern_0.n_11943-vs-SP7-201.alignment counts-znf_b1h_alignment/SP7-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP7-201/pos_patterns.ENCSR468IJT_ChIP_SP7_HEK293_ENCSR374VXB_counts_pattern_1.n_7049-vs-SP7-201.alignment counts-znf_b1h_alignment/SP7-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP7-201/pos_patterns.ENCSR468IJT_ChIP_SP7_HEK293_ENCSR374VXB_counts_pattern_2.n_2988-vs-SP7-201.alignment counts-znf_b1h_alignment/SP7-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP7-201/pos_patterns.ENCSR468IJT_ChIP_SP7_HEK293_ENCSR374VXB_counts_pattern_3.n_2062-vs-SP7-201.alignment counts-znf_b1h_alignment/SP7-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP7-201/pos_patterns.ENCSR468IJT_ChIP_SP7_HEK293_ENCSR374VXB_counts_pattern_4.n_1036-vs-SP7-201.alignment counts-znf_b1h_alignment/SP7-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP7-201/pos_patterns.ENCSR468IJT_ChIP_SP7_HEK293_ENCSR374VXB_counts_pattern_5.n_307-vs-SP7-201.alignment counts-znf_b1h_alignment/SP7-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP7-201/pos_patterns.ENCSR468IJT_ChIP_SP7_HEK293_ENCSR374VXB_counts_pattern_6.n_297-vs-SP7-201.alignment counts-znf_b1h_alignment/SP7-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP7-201/pos_patterns.ENCSR468IJT_ChIP_SP7_HEK293_ENCSR374VXB_counts_pattern_7.n_122-vs-SP7-201.alignment counts-znf_b1h_alignment/SP7-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/SP7-201/pos_patterns.ENCSR468IJT_ChIP_SP7_HEK293_ENCSR374VXB_counts_pattern_8.n_20-vs-SP7-201.alignment counts-znf_b1h_alignment/SP7-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/TRERF1-201/pos_patterns.ENCSR547WSB_ChIP_TRERF1_WTC11_ENCSR616MVS_counts_pattern_0.n_349-vs-TRERF1-201.alignment counts-znf_b1h_alignment/TRERF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/TRERF1-202/pos_patterns.ENCSR547WSB_ChIP_TRERF1_WTC11_ENCSR616MVS_counts_pattern_0.n_349-vs-TRERF1-202.alignment counts-znf_b1h_alignment/TRERF1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/TSHZ1-201/pos_patterns.ENCSR217WRC_ChIP_TSHZ1_HEK293_ENCSR205ZKJ_counts_pattern_0.n_2384-vs-TSHZ1-201.alignment counts-znf_b1h_alignment/TSHZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/TSHZ1-201/pos_patterns.ENCSR217WRC_ChIP_TSHZ1_HEK293_ENCSR205ZKJ_counts_pattern_1.n_1612-vs-TSHZ1-201.alignment counts-znf_b1h_alignment/TSHZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/TSHZ1-201/pos_patterns.ENCSR217WRC_ChIP_TSHZ1_HEK293_ENCSR205ZKJ_counts_pattern_2.n_1467-vs-TSHZ1-201.alignment counts-znf_b1h_alignment/TSHZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/TSHZ1-201/pos_patterns.ENCSR217WRC_ChIP_TSHZ1_HEK293_ENCSR205ZKJ_counts_pattern_3.n_277-vs-TSHZ1-201.alignment counts-znf_b1h_alignment/TSHZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/TSHZ1-201/pos_patterns.ENCSR217WRC_ChIP_TSHZ1_HEK293_ENCSR205ZKJ_counts_pattern_4.n_155-vs-TSHZ1-201.alignment counts-znf_b1h_alignment/TSHZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/TSHZ1-201/pos_patterns.ENCSR217WRC_ChIP_TSHZ1_HEK293_ENCSR205ZKJ_counts_pattern_5.n_113-vs-TSHZ1-201.alignment counts-znf_b1h_alignment/TSHZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/TSHZ1-201/pos_patterns.ENCSR217WRC_ChIP_TSHZ1_HEK293_ENCSR205ZKJ_counts_pattern_6.n_71-vs-TSHZ1-201.alignment counts-znf_b1h_alignment/TSHZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/TSHZ1-201/pos_patterns.ENCSR217WRC_ChIP_TSHZ1_HEK293_ENCSR205ZKJ_counts_pattern_7.n_26-vs-TSHZ1-201.alignment counts-znf_b1h_alignment/TSHZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/TSHZ1-201/pos_patterns.ENCSR958JPH_ChIP_TSHZ1_K562_ENCSR256NWY_counts_pattern_0.n_1100-vs-TSHZ1-201.alignment counts-znf_b1h_alignment/TSHZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/TSHZ1-201/pos_patterns.ENCSR958JPH_ChIP_TSHZ1_K562_ENCSR256NWY_counts_pattern_10.n_20-vs-TSHZ1-201.alignment counts-znf_b1h_alignment/TSHZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/TSHZ1-201/pos_patterns.ENCSR958JPH_ChIP_TSHZ1_K562_ENCSR256NWY_counts_pattern_1.n_68-vs-TSHZ1-201.alignment counts-znf_b1h_alignment/TSHZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/TSHZ1-201/pos_patterns.ENCSR958JPH_ChIP_TSHZ1_K562_ENCSR256NWY_counts_pattern_2.n_56-vs-TSHZ1-201.alignment counts-znf_b1h_alignment/TSHZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/TSHZ1-201/pos_patterns.ENCSR958JPH_ChIP_TSHZ1_K562_ENCSR256NWY_counts_pattern_3.n_51-vs-TSHZ1-201.alignment counts-znf_b1h_alignment/TSHZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/TSHZ1-201/pos_patterns.ENCSR958JPH_ChIP_TSHZ1_K562_ENCSR256NWY_counts_pattern_4.n_48-vs-TSHZ1-201.alignment counts-znf_b1h_alignment/TSHZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/TSHZ1-201/pos_patterns.ENCSR958JPH_ChIP_TSHZ1_K562_ENCSR256NWY_counts_pattern_5.n_35-vs-TSHZ1-201.alignment counts-znf_b1h_alignment/TSHZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/TSHZ1-201/pos_patterns.ENCSR958JPH_ChIP_TSHZ1_K562_ENCSR256NWY_counts_pattern_6.n_28-vs-TSHZ1-201.alignment counts-znf_b1h_alignment/TSHZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/TSHZ1-201/pos_patterns.ENCSR958JPH_ChIP_TSHZ1_K562_ENCSR256NWY_counts_pattern_7.n_27-vs-TSHZ1-201.alignment counts-znf_b1h_alignment/TSHZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/TSHZ1-201/pos_patterns.ENCSR958JPH_ChIP_TSHZ1_K562_ENCSR256NWY_counts_pattern_8.n_25-vs-TSHZ1-201.alignment counts-znf_b1h_alignment/TSHZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/TSHZ1-201/pos_patterns.ENCSR958JPH_ChIP_TSHZ1_K562_ENCSR256NWY_counts_pattern_9.n_20-vs-TSHZ1-201.alignment counts-znf_b1h_alignment/TSHZ1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/Hughes_GR_models_YY1_counts-pos.pattern_0.n_10630-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/Hughes_GR_models_YY1_counts-pos.pattern_10.n_302-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/Hughes_GR_models_YY1_counts-pos.pattern_11.n_53-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/Hughes_GR_models_YY1_counts-pos.pattern_12.n_52-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/Hughes_GR_models_YY1_counts-pos.pattern_13.n_38-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/Hughes_GR_models_YY1_counts-pos.pattern_14.n_21-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/Hughes_GR_models_YY1_counts-pos.pattern_1.n_3757-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/Hughes_GR_models_YY1_counts-pos.pattern_2.n_1099-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/Hughes_GR_models_YY1_counts-pos.pattern_3.n_935-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/Hughes_GR_models_YY1_counts-pos.pattern_4.n_618-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/Hughes_GR_models_YY1_counts-pos.pattern_5.n_562-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/Hughes_GR_models_YY1_counts-pos.pattern_6.n_518-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/Hughes_GR_models_YY1_counts-pos.pattern_7.n_479-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/Hughes_GR_models_YY1_counts-pos.pattern_8.n_353-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/Hughes_GR_models_YY1_counts-pos.pattern_9.n_303-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/Hughes_NB_models_YY1_counts-pos.pattern_0.n_5863-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/Hughes_NB_models_YY1_counts-pos.pattern_1.n_531-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/Hughes_NB_models_YY1_counts-pos.pattern_2.n_124-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/Hughes_NB_models_YY1_counts-pos.pattern_3.n_62-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/Hughes_NB_models_YY1_counts-pos.pattern_4.n_55-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BKD_ChIP_YY1_H1_ENCSR123TMK_counts_pattern_0.n_13488-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BKD_ChIP_YY1_H1_ENCSR123TMK_counts_pattern_10.n_20-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BKD_ChIP_YY1_H1_ENCSR123TMK_counts_pattern_1.n_6115-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BKD_ChIP_YY1_H1_ENCSR123TMK_counts_pattern_2.n_410-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BKD_ChIP_YY1_H1_ENCSR123TMK_counts_pattern_3.n_368-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BKD_ChIP_YY1_H1_ENCSR123TMK_counts_pattern_4.n_248-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BKD_ChIP_YY1_H1_ENCSR123TMK_counts_pattern_5.n_132-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BKD_ChIP_YY1_H1_ENCSR123TMK_counts_pattern_6.n_65-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BKD_ChIP_YY1_H1_ENCSR123TMK_counts_pattern_7.n_51-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BKD_ChIP_YY1_H1_ENCSR123TMK_counts_pattern_8.n_50-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BKD_ChIP_YY1_H1_ENCSR123TMK_counts_pattern_9.n_24-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BKJ_ChIP_YY1_GM12891_ENCSR407QBH_counts_pattern_0.n_8816-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BKJ_ChIP_YY1_GM12891_ENCSR407QBH_counts_pattern_1.n_2402-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BKJ_ChIP_YY1_GM12891_ENCSR407QBH_counts_pattern_2.n_314-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BKJ_ChIP_YY1_GM12891_ENCSR407QBH_counts_pattern_3.n_235-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BKJ_ChIP_YY1_GM12891_ENCSR407QBH_counts_pattern_4.n_37-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BKJ_ChIP_YY1_GM12891_ENCSR407QBH_counts_pattern_5.n_27-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BKJ_ChIP_YY1_GM12891_ENCSR407QBH_counts_pattern_6.n_20-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BKU_ChIP_YY1_K562_ENCSR141YSY_counts_pattern_0.n_7790-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BKU_ChIP_YY1_K562_ENCSR141YSY_counts_pattern_1.n_1168-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BKU_ChIP_YY1_K562_ENCSR141YSY_counts_pattern_2.n_25-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BKU_ChIP_YY1_K562_ENCSR141YSY_counts_pattern_3.n_21-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BKU_ChIP_YY1_K562_ENCSR141YSY_counts_pattern_4.n_21-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BLT_ChIP_YY1_GM12892_ENCSR805DUE_counts_pattern_0.n_14869-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BLT_ChIP_YY1_GM12892_ENCSR805DUE_counts_pattern_1.n_1342-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BLT_ChIP_YY1_GM12892_ENCSR805DUE_counts_pattern_2.n_490-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BLT_ChIP_YY1_GM12892_ENCSR805DUE_counts_pattern_3.n_281-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BLT_ChIP_YY1_GM12892_ENCSR805DUE_counts_pattern_4.n_240-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BLT_ChIP_YY1_GM12892_ENCSR805DUE_counts_pattern_5.n_84-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BLT_ChIP_YY1_GM12892_ENCSR805DUE_counts_pattern_6.n_34-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BLT_ChIP_YY1_GM12892_ENCSR805DUE_counts_pattern_7.n_20-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BLZ_ChIP_YY1_SK-N-SH_ENCSR538CIU_counts_pattern_0.n_10340-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BLZ_ChIP_YY1_SK-N-SH_ENCSR538CIU_counts_pattern_1.n_1520-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BLZ_ChIP_YY1_SK-N-SH_ENCSR538CIU_counts_pattern_2.n_388-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BLZ_ChIP_YY1_SK-N-SH_ENCSR538CIU_counts_pattern_3.n_331-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BLZ_ChIP_YY1_SK-N-SH_ENCSR538CIU_counts_pattern_4.n_113-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BMH_ChIP_YY1_K562_ENCSR763WTY_counts_pattern_0.n_16228-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BMH_ChIP_YY1_K562_ENCSR763WTY_counts_pattern_1.n_257-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BNP_ChIP_YY1_GM12878_ENCSR466HDF_counts_pattern_10.n_37-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BNP_ChIP_YY1_GM12878_ENCSR466HDF_counts_pattern_1.n_10153-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BNP_ChIP_YY1_GM12878_ENCSR466HDF_counts_pattern_2.n_646-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BNP_ChIP_YY1_GM12878_ENCSR466HDF_counts_pattern_3.n_462-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BNP_ChIP_YY1_GM12878_ENCSR466HDF_counts_pattern_4.n_365-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BNP_ChIP_YY1_GM12878_ENCSR466HDF_counts_pattern_5.n_274-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BNP_ChIP_YY1_GM12878_ENCSR466HDF_counts_pattern_6.n_92-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BNP_ChIP_YY1_GM12878_ENCSR466HDF_counts_pattern_7.n_55-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BNP_ChIP_YY1_GM12878_ENCSR466HDF_counts_pattern_8.n_37-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BNP_ChIP_YY1_GM12878_ENCSR466HDF_counts_pattern_9.n_37-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BNT_ChIP_YY1_HepG2_ENCSR715ALH_counts_pattern_0.n_9452-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BNT_ChIP_YY1_HepG2_ENCSR715ALH_counts_pattern_10.n_30-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BNT_ChIP_YY1_HepG2_ENCSR715ALH_counts_pattern_11.n_26-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BNT_ChIP_YY1_HepG2_ENCSR715ALH_counts_pattern_12.n_25-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BNT_ChIP_YY1_HepG2_ENCSR715ALH_counts_pattern_1.n_2066-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BNT_ChIP_YY1_HepG2_ENCSR715ALH_counts_pattern_2.n_401-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BNT_ChIP_YY1_HepG2_ENCSR715ALH_counts_pattern_3.n_266-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BNT_ChIP_YY1_HepG2_ENCSR715ALH_counts_pattern_4.n_94-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BNT_ChIP_YY1_HepG2_ENCSR715ALH_counts_pattern_5.n_85-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BNT_ChIP_YY1_HepG2_ENCSR715ALH_counts_pattern_6.n_67-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BNT_ChIP_YY1_HepG2_ENCSR715ALH_counts_pattern_7.n_56-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BNT_ChIP_YY1_HepG2_ENCSR715ALH_counts_pattern_8.n_43-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BNT_ChIP_YY1_HepG2_ENCSR715ALH_counts_pattern_9.n_42-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BNX_ChIP_YY1_HCT116_ENCSR976XZG_counts_pattern_0.n_5327-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BNX_ChIP_YY1_HCT116_ENCSR976XZG_counts_pattern_1.n_3707-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BNX_ChIP_YY1_HCT116_ENCSR976XZG_counts_pattern_2.n_3404-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BNX_ChIP_YY1_HCT116_ENCSR976XZG_counts_pattern_3.n_312-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BNX_ChIP_YY1_HCT116_ENCSR976XZG_counts_pattern_4.n_203-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BNX_ChIP_YY1_HCT116_ENCSR976XZG_counts_pattern_5.n_57-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BNX_ChIP_YY1_HCT116_ENCSR976XZG_counts_pattern_6.n_35-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BNX_ChIP_YY1_HCT116_ENCSR976XZG_counts_pattern_7.n_31-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BNX_ChIP_YY1_HCT116_ENCSR976XZG_counts_pattern_8.n_26-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BPM_ChIP_YY1_A549_ENCSR623ODG_counts_pattern_0.n_7559-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BPM_ChIP_YY1_A549_ENCSR623ODG_counts_pattern_1.n_217-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BPM_ChIP_YY1_A549_ENCSR623ODG_counts_pattern_2.n_200-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BPM_ChIP_YY1_A549_ENCSR623ODG_counts_pattern_3.n_188-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BPM_ChIP_YY1_A549_ENCSR623ODG_counts_pattern_4.n_76-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BPM_ChIP_YY1_A549_ENCSR623ODG_counts_pattern_5.n_43-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BPM_ChIP_YY1_A549_ENCSR623ODG_counts_pattern_6.n_33-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BSM_ChIP_YY1_SK-N-SH_ENCSR098EIV_counts_pattern_0.n_7726-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BSM_ChIP_YY1_SK-N-SH_ENCSR098EIV_counts_pattern_1.n_1494-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BSM_ChIP_YY1_SK-N-SH_ENCSR098EIV_counts_pattern_2.n_348-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BSM_ChIP_YY1_SK-N-SH_ENCSR098EIV_counts_pattern_3.n_75-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BSM_ChIP_YY1_SK-N-SH_ENCSR098EIV_counts_pattern_4.n_71-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BSM_ChIP_YY1_SK-N-SH_ENCSR098EIV_counts_pattern_5.n_21-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BSY_ChIP_YY1_Ishikawa_ENCSR809DOC_counts_pattern_0.n_8717-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BSY_ChIP_YY1_Ishikawa_ENCSR809DOC_counts_pattern_1.n_376-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BSY_ChIP_YY1_Ishikawa_ENCSR809DOC_counts_pattern_2.n_152-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BSY_ChIP_YY1_Ishikawa_ENCSR809DOC_counts_pattern_3.n_149-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BSY_ChIP_YY1_Ishikawa_ENCSR809DOC_counts_pattern_4.n_85-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000EUM_ChIP_YY1_GM12878_ENCSR401RIZ_counts_pattern_0.n_2161-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000EWF_ChIP_YY1_K562_ENCSR911NSC_counts_pattern_0.n_5281-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000EXG_ChIP_YY1_NT2_D1_ENCSR918YXR_counts_pattern_0.n_4318-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000EXG_ChIP_YY1_NT2_D1_ENCSR918YXR_counts_pattern_1.n_68-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR382MOM_ChIP_YY1_liver_ENCSR628OOA_counts_pattern_0.n_8270-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR382MOM_ChIP_YY1_liver_ENCSR628OOA_counts_pattern_10.n_42-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR382MOM_ChIP_YY1_liver_ENCSR628OOA_counts_pattern_11.n_28-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR382MOM_ChIP_YY1_liver_ENCSR628OOA_counts_pattern_12.n_26-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR382MOM_ChIP_YY1_liver_ENCSR628OOA_counts_pattern_13.n_21-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR382MOM_ChIP_YY1_liver_ENCSR628OOA_counts_pattern_1.n_7317-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR382MOM_ChIP_YY1_liver_ENCSR628OOA_counts_pattern_2.n_7244-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR382MOM_ChIP_YY1_liver_ENCSR628OOA_counts_pattern_3.n_4297-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR382MOM_ChIP_YY1_liver_ENCSR628OOA_counts_pattern_4.n_3897-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR382MOM_ChIP_YY1_liver_ENCSR628OOA_counts_pattern_5.n_1285-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR382MOM_ChIP_YY1_liver_ENCSR628OOA_counts_pattern_6.n_151-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR382MOM_ChIP_YY1_liver_ENCSR628OOA_counts_pattern_7.n_141-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR382MOM_ChIP_YY1_liver_ENCSR628OOA_counts_pattern_8.n_138-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR382MOM_ChIP_YY1_liver_ENCSR628OOA_counts_pattern_9.n_130-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR859RAO_ChIP_YY1_HEK293_ENCSR972DQJ_counts_pattern_0.n_6328-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR859RAO_ChIP_YY1_HEK293_ENCSR972DQJ_counts_pattern_1.n_22-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR994YLZ_ChIP_YY1_liver_ENCSR998DCF_counts_pattern_0.n_10725-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR994YLZ_ChIP_YY1_liver_ENCSR998DCF_counts_pattern_1.n_2751-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR994YLZ_ChIP_YY1_liver_ENCSR998DCF_counts_pattern_2.n_2039-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR994YLZ_ChIP_YY1_liver_ENCSR998DCF_counts_pattern_3.n_595-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR994YLZ_ChIP_YY1_liver_ENCSR998DCF_counts_pattern_4.n_555-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR994YLZ_ChIP_YY1_liver_ENCSR998DCF_counts_pattern_5.n_199-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR994YLZ_ChIP_YY1_liver_ENCSR998DCF_counts_pattern_6.n_148-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR994YLZ_ChIP_YY1_liver_ENCSR998DCF_counts_pattern_7.n_53-vs-YY1-201.alignment counts-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY2-201/pos_patterns.ENCSR692HSE_ChIP_YY2_HEK293_ENCSR313BRF_counts_pattern_0.n_4896-vs-YY2-201.alignment counts-znf_b1h_alignment/YY2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY2-201/pos_patterns.ENCSR692HSE_ChIP_YY2_HEK293_ENCSR313BRF_counts_pattern_1.n_217-vs-YY2-201.alignment counts-znf_b1h_alignment/YY2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/YY2-201/pos_patterns.ENCSR692HSE_ChIP_YY2_HEK293_ENCSR313BRF_counts_pattern_2.n_21-vs-YY2-201.alignment counts-znf_b1h_alignment/YY2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/WT1-201/pos_patterns.ENCSR966PJJ_ChIP_WT1_HEK293_ENCSR129GSW_counts_pattern_0.n_7826-vs-WT1-201.alignment counts-znf_b1h_alignment/WT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/WT1-201/pos_patterns.ENCSR966PJJ_ChIP_WT1_HEK293_ENCSR129GSW_counts_pattern_10.n_160-vs-WT1-201.alignment counts-znf_b1h_alignment/WT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/WT1-201/pos_patterns.ENCSR966PJJ_ChIP_WT1_HEK293_ENCSR129GSW_counts_pattern_11.n_153-vs-WT1-201.alignment counts-znf_b1h_alignment/WT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/WT1-201/pos_patterns.ENCSR966PJJ_ChIP_WT1_HEK293_ENCSR129GSW_counts_pattern_12.n_143-vs-WT1-201.alignment counts-znf_b1h_alignment/WT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/WT1-201/pos_patterns.ENCSR966PJJ_ChIP_WT1_HEK293_ENCSR129GSW_counts_pattern_13.n_136-vs-WT1-201.alignment counts-znf_b1h_alignment/WT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/WT1-201/pos_patterns.ENCSR966PJJ_ChIP_WT1_HEK293_ENCSR129GSW_counts_pattern_14.n_113-vs-WT1-201.alignment counts-znf_b1h_alignment/WT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/WT1-201/pos_patterns.ENCSR966PJJ_ChIP_WT1_HEK293_ENCSR129GSW_counts_pattern_15.n_72-vs-WT1-201.alignment counts-znf_b1h_alignment/WT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/WT1-201/pos_patterns.ENCSR966PJJ_ChIP_WT1_HEK293_ENCSR129GSW_counts_pattern_16.n_70-vs-WT1-201.alignment counts-znf_b1h_alignment/WT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/WT1-201/pos_patterns.ENCSR966PJJ_ChIP_WT1_HEK293_ENCSR129GSW_counts_pattern_17.n_58-vs-WT1-201.alignment counts-znf_b1h_alignment/WT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/WT1-201/pos_patterns.ENCSR966PJJ_ChIP_WT1_HEK293_ENCSR129GSW_counts_pattern_18.n_32-vs-WT1-201.alignment counts-znf_b1h_alignment/WT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/WT1-201/pos_patterns.ENCSR966PJJ_ChIP_WT1_HEK293_ENCSR129GSW_counts_pattern_1.n_2590-vs-WT1-201.alignment counts-znf_b1h_alignment/WT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/WT1-201/pos_patterns.ENCSR966PJJ_ChIP_WT1_HEK293_ENCSR129GSW_counts_pattern_2.n_1439-vs-WT1-201.alignment counts-znf_b1h_alignment/WT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/WT1-201/pos_patterns.ENCSR966PJJ_ChIP_WT1_HEK293_ENCSR129GSW_counts_pattern_3.n_1355-vs-WT1-201.alignment counts-znf_b1h_alignment/WT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/WT1-201/pos_patterns.ENCSR966PJJ_ChIP_WT1_HEK293_ENCSR129GSW_counts_pattern_4.n_819-vs-WT1-201.alignment counts-znf_b1h_alignment/WT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/WT1-201/pos_patterns.ENCSR966PJJ_ChIP_WT1_HEK293_ENCSR129GSW_counts_pattern_5.n_340-vs-WT1-201.alignment counts-znf_b1h_alignment/WT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/WT1-201/pos_patterns.ENCSR966PJJ_ChIP_WT1_HEK293_ENCSR129GSW_counts_pattern_6.n_259-vs-WT1-201.alignment counts-znf_b1h_alignment/WT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/WT1-201/pos_patterns.ENCSR966PJJ_ChIP_WT1_HEK293_ENCSR129GSW_counts_pattern_7.n_229-vs-WT1-201.alignment counts-znf_b1h_alignment/WT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/WT1-201/pos_patterns.ENCSR966PJJ_ChIP_WT1_HEK293_ENCSR129GSW_counts_pattern_8.n_222-vs-WT1-201.alignment counts-znf_b1h_alignment/WT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/WT1-201/pos_patterns.ENCSR966PJJ_ChIP_WT1_HEK293_ENCSR129GSW_counts_pattern_9.n_172-vs-WT1-201.alignment counts-znf_b1h_alignment/WT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB10-201/pos_patterns.ENCSR004PLU_ChIP_ZBTB10_HEK293_ENCSR924UEM_counts_pattern_0.n_7915-vs-ZBTB10-201.alignment counts-znf_b1h_alignment/ZBTB10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB10-201/pos_patterns.ENCSR004PLU_ChIP_ZBTB10_HEK293_ENCSR924UEM_counts_pattern_1.n_690-vs-ZBTB10-201.alignment counts-znf_b1h_alignment/ZBTB10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB10-201/pos_patterns.ENCSR004PLU_ChIP_ZBTB10_HEK293_ENCSR924UEM_counts_pattern_2.n_668-vs-ZBTB10-201.alignment counts-znf_b1h_alignment/ZBTB10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB10-201/pos_patterns.ENCSR004PLU_ChIP_ZBTB10_HEK293_ENCSR924UEM_counts_pattern_3.n_567-vs-ZBTB10-201.alignment counts-znf_b1h_alignment/ZBTB10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB10-201/pos_patterns.ENCSR004PLU_ChIP_ZBTB10_HEK293_ENCSR924UEM_counts_pattern_4.n_399-vs-ZBTB10-201.alignment counts-znf_b1h_alignment/ZBTB10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB10-201/pos_patterns.ENCSR004PLU_ChIP_ZBTB10_HEK293_ENCSR924UEM_counts_pattern_5.n_336-vs-ZBTB10-201.alignment counts-znf_b1h_alignment/ZBTB10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB10-201/pos_patterns.ENCSR004PLU_ChIP_ZBTB10_HEK293_ENCSR924UEM_counts_pattern_6.n_133-vs-ZBTB10-201.alignment counts-znf_b1h_alignment/ZBTB10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB10-201/pos_patterns.ENCSR004PLU_ChIP_ZBTB10_HEK293_ENCSR924UEM_counts_pattern_7.n_78-vs-ZBTB10-201.alignment counts-znf_b1h_alignment/ZBTB10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB10-201/pos_patterns.ENCSR004PLU_ChIP_ZBTB10_HEK293_ENCSR924UEM_counts_pattern_8.n_60-vs-ZBTB10-201.alignment counts-znf_b1h_alignment/ZBTB10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB10-201/pos_patterns.ENCSR959COF_ChIP_ZBTB10_HepG2_ENCSR696CQP_counts_pattern_0.n_4724-vs-ZBTB10-201.alignment counts-znf_b1h_alignment/ZBTB10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB10-201/pos_patterns.ENCSR959COF_ChIP_ZBTB10_HepG2_ENCSR696CQP_counts_pattern_1.n_1059-vs-ZBTB10-201.alignment counts-znf_b1h_alignment/ZBTB10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB10-201/pos_patterns.ENCSR959COF_ChIP_ZBTB10_HepG2_ENCSR696CQP_counts_pattern_2.n_890-vs-ZBTB10-201.alignment counts-znf_b1h_alignment/ZBTB10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB10-201/pos_patterns.ENCSR959COF_ChIP_ZBTB10_HepG2_ENCSR696CQP_counts_pattern_3.n_277-vs-ZBTB10-201.alignment counts-znf_b1h_alignment/ZBTB10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB10-201/pos_patterns.ENCSR959COF_ChIP_ZBTB10_HepG2_ENCSR696CQP_counts_pattern_4.n_223-vs-ZBTB10-201.alignment counts-znf_b1h_alignment/ZBTB10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB10-201/pos_patterns.ENCSR959COF_ChIP_ZBTB10_HepG2_ENCSR696CQP_counts_pattern_5.n_87-vs-ZBTB10-201.alignment counts-znf_b1h_alignment/ZBTB10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB10-201/pos_patterns.ENCSR959COF_ChIP_ZBTB10_HepG2_ENCSR696CQP_counts_pattern_6.n_71-vs-ZBTB10-201.alignment counts-znf_b1h_alignment/ZBTB10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB10-201/pos_patterns.ENCSR959COF_ChIP_ZBTB10_HepG2_ENCSR696CQP_counts_pattern_7.n_41-vs-ZBTB10-201.alignment counts-znf_b1h_alignment/ZBTB10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB10-201/pos_patterns.ENCSR959COF_ChIP_ZBTB10_HepG2_ENCSR696CQP_counts_pattern_8.n_37-vs-ZBTB10-201.alignment counts-znf_b1h_alignment/ZBTB10-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB10-202/pos_patterns.ENCSR004PLU_ChIP_ZBTB10_HEK293_ENCSR924UEM_counts_pattern_0.n_7915-vs-ZBTB10-202.alignment counts-znf_b1h_alignment/ZBTB10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB10-202/pos_patterns.ENCSR004PLU_ChIP_ZBTB10_HEK293_ENCSR924UEM_counts_pattern_1.n_690-vs-ZBTB10-202.alignment counts-znf_b1h_alignment/ZBTB10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB10-202/pos_patterns.ENCSR004PLU_ChIP_ZBTB10_HEK293_ENCSR924UEM_counts_pattern_2.n_668-vs-ZBTB10-202.alignment counts-znf_b1h_alignment/ZBTB10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB10-202/pos_patterns.ENCSR004PLU_ChIP_ZBTB10_HEK293_ENCSR924UEM_counts_pattern_3.n_567-vs-ZBTB10-202.alignment counts-znf_b1h_alignment/ZBTB10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB10-202/pos_patterns.ENCSR004PLU_ChIP_ZBTB10_HEK293_ENCSR924UEM_counts_pattern_4.n_399-vs-ZBTB10-202.alignment counts-znf_b1h_alignment/ZBTB10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB10-202/pos_patterns.ENCSR004PLU_ChIP_ZBTB10_HEK293_ENCSR924UEM_counts_pattern_5.n_336-vs-ZBTB10-202.alignment counts-znf_b1h_alignment/ZBTB10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB10-202/pos_patterns.ENCSR004PLU_ChIP_ZBTB10_HEK293_ENCSR924UEM_counts_pattern_6.n_133-vs-ZBTB10-202.alignment counts-znf_b1h_alignment/ZBTB10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB10-202/pos_patterns.ENCSR004PLU_ChIP_ZBTB10_HEK293_ENCSR924UEM_counts_pattern_7.n_78-vs-ZBTB10-202.alignment counts-znf_b1h_alignment/ZBTB10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB10-202/pos_patterns.ENCSR004PLU_ChIP_ZBTB10_HEK293_ENCSR924UEM_counts_pattern_8.n_60-vs-ZBTB10-202.alignment counts-znf_b1h_alignment/ZBTB10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB10-202/pos_patterns.ENCSR959COF_ChIP_ZBTB10_HepG2_ENCSR696CQP_counts_pattern_0.n_4724-vs-ZBTB10-202.alignment counts-znf_b1h_alignment/ZBTB10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB10-202/pos_patterns.ENCSR959COF_ChIP_ZBTB10_HepG2_ENCSR696CQP_counts_pattern_1.n_1059-vs-ZBTB10-202.alignment counts-znf_b1h_alignment/ZBTB10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB10-202/pos_patterns.ENCSR959COF_ChIP_ZBTB10_HepG2_ENCSR696CQP_counts_pattern_2.n_890-vs-ZBTB10-202.alignment counts-znf_b1h_alignment/ZBTB10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB10-202/pos_patterns.ENCSR959COF_ChIP_ZBTB10_HepG2_ENCSR696CQP_counts_pattern_3.n_277-vs-ZBTB10-202.alignment counts-znf_b1h_alignment/ZBTB10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB10-202/pos_patterns.ENCSR959COF_ChIP_ZBTB10_HepG2_ENCSR696CQP_counts_pattern_4.n_223-vs-ZBTB10-202.alignment counts-znf_b1h_alignment/ZBTB10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB10-202/pos_patterns.ENCSR959COF_ChIP_ZBTB10_HepG2_ENCSR696CQP_counts_pattern_5.n_87-vs-ZBTB10-202.alignment counts-znf_b1h_alignment/ZBTB10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB10-202/pos_patterns.ENCSR959COF_ChIP_ZBTB10_HepG2_ENCSR696CQP_counts_pattern_6.n_71-vs-ZBTB10-202.alignment counts-znf_b1h_alignment/ZBTB10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB10-202/pos_patterns.ENCSR959COF_ChIP_ZBTB10_HepG2_ENCSR696CQP_counts_pattern_7.n_41-vs-ZBTB10-202.alignment counts-znf_b1h_alignment/ZBTB10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB10-202/pos_patterns.ENCSR959COF_ChIP_ZBTB10_HepG2_ENCSR696CQP_counts_pattern_8.n_37-vs-ZBTB10-202.alignment counts-znf_b1h_alignment/ZBTB10-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/neg_patterns.ENCSR468DVP_ChIP_ZBTB11_K562_ENCSR116AEC_counts_pattern_0.n_352-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/neg_patterns.ENCSR468DVP_ChIP_ZBTB11_K562_ENCSR116AEC_counts_pattern_10.n_22-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/neg_patterns.ENCSR468DVP_ChIP_ZBTB11_K562_ENCSR116AEC_counts_pattern_11.n_22-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/neg_patterns.ENCSR468DVP_ChIP_ZBTB11_K562_ENCSR116AEC_counts_pattern_12.n_20-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/neg_patterns.ENCSR468DVP_ChIP_ZBTB11_K562_ENCSR116AEC_counts_pattern_1.n_118-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/neg_patterns.ENCSR468DVP_ChIP_ZBTB11_K562_ENCSR116AEC_counts_pattern_2.n_116-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/neg_patterns.ENCSR468DVP_ChIP_ZBTB11_K562_ENCSR116AEC_counts_pattern_3.n_63-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/neg_patterns.ENCSR468DVP_ChIP_ZBTB11_K562_ENCSR116AEC_counts_pattern_4.n_40-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/neg_patterns.ENCSR468DVP_ChIP_ZBTB11_K562_ENCSR116AEC_counts_pattern_5.n_39-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/neg_patterns.ENCSR468DVP_ChIP_ZBTB11_K562_ENCSR116AEC_counts_pattern_6.n_35-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/neg_patterns.ENCSR468DVP_ChIP_ZBTB11_K562_ENCSR116AEC_counts_pattern_7.n_33-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/neg_patterns.ENCSR468DVP_ChIP_ZBTB11_K562_ENCSR116AEC_counts_pattern_8.n_29-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/neg_patterns.ENCSR468DVP_ChIP_ZBTB11_K562_ENCSR116AEC_counts_pattern_9.n_27-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR057DTZ_ChIP_ZBTB11_GM12878_ENCSR549XOW_counts_pattern_0.n_2408-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR057DTZ_ChIP_ZBTB11_GM12878_ENCSR549XOW_counts_pattern_1.n_135-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR057DTZ_ChIP_ZBTB11_GM12878_ENCSR549XOW_counts_pattern_2.n_56-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR057DTZ_ChIP_ZBTB11_GM12878_ENCSR549XOW_counts_pattern_3.n_56-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR057DTZ_ChIP_ZBTB11_GM12878_ENCSR549XOW_counts_pattern_4.n_55-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR057DTZ_ChIP_ZBTB11_GM12878_ENCSR549XOW_counts_pattern_5.n_47-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR057DTZ_ChIP_ZBTB11_GM12878_ENCSR549XOW_counts_pattern_6.n_28-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR057DTZ_ChIP_ZBTB11_GM12878_ENCSR549XOW_counts_pattern_7.n_24-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR155VDK_ChIP_ZBTB11_MCF-7_ENCSR336QZC_counts_pattern_0.n_1809-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR155VDK_ChIP_ZBTB11_MCF-7_ENCSR336QZC_counts_pattern_1.n_707-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR155VDK_ChIP_ZBTB11_MCF-7_ENCSR336QZC_counts_pattern_2.n_295-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR155VDK_ChIP_ZBTB11_MCF-7_ENCSR336QZC_counts_pattern_3.n_25-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR155VDK_ChIP_ZBTB11_MCF-7_ENCSR336QZC_counts_pattern_4.n_21-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR331GDC_ChIP_ZBTB11_K562_ENCSR135ESM_counts_pattern_0.n_6620-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR331GDC_ChIP_ZBTB11_K562_ENCSR135ESM_counts_pattern_1.n_1053-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR331GDC_ChIP_ZBTB11_K562_ENCSR135ESM_counts_pattern_2.n_318-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR331GDC_ChIP_ZBTB11_K562_ENCSR135ESM_counts_pattern_3.n_64-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR331GDC_ChIP_ZBTB11_K562_ENCSR135ESM_counts_pattern_4.n_47-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR468DVP_ChIP_ZBTB11_K562_ENCSR116AEC_counts_pattern_0.n_1688-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR468DVP_ChIP_ZBTB11_K562_ENCSR116AEC_counts_pattern_1.n_1203-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR468DVP_ChIP_ZBTB11_K562_ENCSR116AEC_counts_pattern_2.n_913-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR468DVP_ChIP_ZBTB11_K562_ENCSR116AEC_counts_pattern_3.n_545-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR468DVP_ChIP_ZBTB11_K562_ENCSR116AEC_counts_pattern_4.n_78-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR468DVP_ChIP_ZBTB11_K562_ENCSR116AEC_counts_pattern_5.n_36-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR706BJO_ChIP_ZBTB11_K562_ENCSR873OML_counts_pattern_0.n_14558-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR706BJO_ChIP_ZBTB11_K562_ENCSR873OML_counts_pattern_10.n_142-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR706BJO_ChIP_ZBTB11_K562_ENCSR873OML_counts_pattern_11.n_111-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR706BJO_ChIP_ZBTB11_K562_ENCSR873OML_counts_pattern_12.n_92-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR706BJO_ChIP_ZBTB11_K562_ENCSR873OML_counts_pattern_13.n_89-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR706BJO_ChIP_ZBTB11_K562_ENCSR873OML_counts_pattern_14.n_78-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR706BJO_ChIP_ZBTB11_K562_ENCSR873OML_counts_pattern_15.n_76-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR706BJO_ChIP_ZBTB11_K562_ENCSR873OML_counts_pattern_16.n_59-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR706BJO_ChIP_ZBTB11_K562_ENCSR873OML_counts_pattern_17.n_47-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR706BJO_ChIP_ZBTB11_K562_ENCSR873OML_counts_pattern_18.n_22-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR706BJO_ChIP_ZBTB11_K562_ENCSR873OML_counts_pattern_1.n_2610-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR706BJO_ChIP_ZBTB11_K562_ENCSR873OML_counts_pattern_2.n_568-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR706BJO_ChIP_ZBTB11_K562_ENCSR873OML_counts_pattern_3.n_407-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR706BJO_ChIP_ZBTB11_K562_ENCSR873OML_counts_pattern_4.n_321-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR706BJO_ChIP_ZBTB11_K562_ENCSR873OML_counts_pattern_5.n_299-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR706BJO_ChIP_ZBTB11_K562_ENCSR873OML_counts_pattern_6.n_257-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR706BJO_ChIP_ZBTB11_K562_ENCSR873OML_counts_pattern_7.n_247-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR706BJO_ChIP_ZBTB11_K562_ENCSR873OML_counts_pattern_8.n_197-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR706BJO_ChIP_ZBTB11_K562_ENCSR873OML_counts_pattern_9.n_166-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR882ZTS_ChIP_ZBTB11_HEK293_ENCSR475ZNU_counts_pattern_0.n_14692-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR882ZTS_ChIP_ZBTB11_HEK293_ENCSR475ZNU_counts_pattern_1.n_6229-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR882ZTS_ChIP_ZBTB11_HEK293_ENCSR475ZNU_counts_pattern_2.n_2387-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR882ZTS_ChIP_ZBTB11_HEK293_ENCSR475ZNU_counts_pattern_3.n_408-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR882ZTS_ChIP_ZBTB11_HEK293_ENCSR475ZNU_counts_pattern_4.n_161-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR882ZTS_ChIP_ZBTB11_HEK293_ENCSR475ZNU_counts_pattern_5.n_118-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR882ZTS_ChIP_ZBTB11_HEK293_ENCSR475ZNU_counts_pattern_6.n_84-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR882ZTS_ChIP_ZBTB11_HEK293_ENCSR475ZNU_counts_pattern_7.n_32-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR985OYK_ChIP_ZBTB11_K562_ENCSR327WKX_counts_pattern_0.n_3704-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR985OYK_ChIP_ZBTB11_K562_ENCSR327WKX_counts_pattern_1.n_226-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR985OYK_ChIP_ZBTB11_K562_ENCSR327WKX_counts_pattern_2.n_126-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR985OYK_ChIP_ZBTB11_K562_ENCSR327WKX_counts_pattern_3.n_88-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR985OYK_ChIP_ZBTB11_K562_ENCSR327WKX_counts_pattern_4.n_41-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-201/pos_patterns.ENCSR985OYK_ChIP_ZBTB11_K562_ENCSR327WKX_counts_pattern_5.n_28-vs-ZBTB11-201.alignment counts-znf_b1h_alignment/ZBTB11-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/neg_patterns.ENCSR468DVP_ChIP_ZBTB11_K562_ENCSR116AEC_counts_pattern_0.n_352-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/neg_patterns.ENCSR468DVP_ChIP_ZBTB11_K562_ENCSR116AEC_counts_pattern_10.n_22-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/neg_patterns.ENCSR468DVP_ChIP_ZBTB11_K562_ENCSR116AEC_counts_pattern_11.n_22-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/neg_patterns.ENCSR468DVP_ChIP_ZBTB11_K562_ENCSR116AEC_counts_pattern_12.n_20-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/neg_patterns.ENCSR468DVP_ChIP_ZBTB11_K562_ENCSR116AEC_counts_pattern_1.n_118-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/neg_patterns.ENCSR468DVP_ChIP_ZBTB11_K562_ENCSR116AEC_counts_pattern_2.n_116-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/neg_patterns.ENCSR468DVP_ChIP_ZBTB11_K562_ENCSR116AEC_counts_pattern_3.n_63-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/neg_patterns.ENCSR468DVP_ChIP_ZBTB11_K562_ENCSR116AEC_counts_pattern_4.n_40-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/neg_patterns.ENCSR468DVP_ChIP_ZBTB11_K562_ENCSR116AEC_counts_pattern_5.n_39-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/neg_patterns.ENCSR468DVP_ChIP_ZBTB11_K562_ENCSR116AEC_counts_pattern_6.n_35-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/neg_patterns.ENCSR468DVP_ChIP_ZBTB11_K562_ENCSR116AEC_counts_pattern_7.n_33-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/neg_patterns.ENCSR468DVP_ChIP_ZBTB11_K562_ENCSR116AEC_counts_pattern_8.n_29-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/neg_patterns.ENCSR468DVP_ChIP_ZBTB11_K562_ENCSR116AEC_counts_pattern_9.n_27-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR057DTZ_ChIP_ZBTB11_GM12878_ENCSR549XOW_counts_pattern_0.n_2408-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR057DTZ_ChIP_ZBTB11_GM12878_ENCSR549XOW_counts_pattern_1.n_135-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR057DTZ_ChIP_ZBTB11_GM12878_ENCSR549XOW_counts_pattern_2.n_56-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR057DTZ_ChIP_ZBTB11_GM12878_ENCSR549XOW_counts_pattern_3.n_56-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR057DTZ_ChIP_ZBTB11_GM12878_ENCSR549XOW_counts_pattern_4.n_55-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR057DTZ_ChIP_ZBTB11_GM12878_ENCSR549XOW_counts_pattern_5.n_47-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR057DTZ_ChIP_ZBTB11_GM12878_ENCSR549XOW_counts_pattern_6.n_28-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR057DTZ_ChIP_ZBTB11_GM12878_ENCSR549XOW_counts_pattern_7.n_24-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR155VDK_ChIP_ZBTB11_MCF-7_ENCSR336QZC_counts_pattern_0.n_1809-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR155VDK_ChIP_ZBTB11_MCF-7_ENCSR336QZC_counts_pattern_1.n_707-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR155VDK_ChIP_ZBTB11_MCF-7_ENCSR336QZC_counts_pattern_2.n_295-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR155VDK_ChIP_ZBTB11_MCF-7_ENCSR336QZC_counts_pattern_3.n_25-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR155VDK_ChIP_ZBTB11_MCF-7_ENCSR336QZC_counts_pattern_4.n_21-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR331GDC_ChIP_ZBTB11_K562_ENCSR135ESM_counts_pattern_0.n_6620-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR331GDC_ChIP_ZBTB11_K562_ENCSR135ESM_counts_pattern_1.n_1053-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR331GDC_ChIP_ZBTB11_K562_ENCSR135ESM_counts_pattern_2.n_318-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR331GDC_ChIP_ZBTB11_K562_ENCSR135ESM_counts_pattern_3.n_64-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR331GDC_ChIP_ZBTB11_K562_ENCSR135ESM_counts_pattern_4.n_47-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR468DVP_ChIP_ZBTB11_K562_ENCSR116AEC_counts_pattern_0.n_1688-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR468DVP_ChIP_ZBTB11_K562_ENCSR116AEC_counts_pattern_1.n_1203-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR468DVP_ChIP_ZBTB11_K562_ENCSR116AEC_counts_pattern_2.n_913-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR468DVP_ChIP_ZBTB11_K562_ENCSR116AEC_counts_pattern_3.n_545-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR468DVP_ChIP_ZBTB11_K562_ENCSR116AEC_counts_pattern_4.n_78-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR468DVP_ChIP_ZBTB11_K562_ENCSR116AEC_counts_pattern_5.n_36-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR706BJO_ChIP_ZBTB11_K562_ENCSR873OML_counts_pattern_0.n_14558-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR706BJO_ChIP_ZBTB11_K562_ENCSR873OML_counts_pattern_10.n_142-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR706BJO_ChIP_ZBTB11_K562_ENCSR873OML_counts_pattern_11.n_111-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR706BJO_ChIP_ZBTB11_K562_ENCSR873OML_counts_pattern_12.n_92-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR706BJO_ChIP_ZBTB11_K562_ENCSR873OML_counts_pattern_13.n_89-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR706BJO_ChIP_ZBTB11_K562_ENCSR873OML_counts_pattern_14.n_78-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR706BJO_ChIP_ZBTB11_K562_ENCSR873OML_counts_pattern_15.n_76-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR706BJO_ChIP_ZBTB11_K562_ENCSR873OML_counts_pattern_16.n_59-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR706BJO_ChIP_ZBTB11_K562_ENCSR873OML_counts_pattern_17.n_47-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR706BJO_ChIP_ZBTB11_K562_ENCSR873OML_counts_pattern_18.n_22-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR706BJO_ChIP_ZBTB11_K562_ENCSR873OML_counts_pattern_1.n_2610-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR706BJO_ChIP_ZBTB11_K562_ENCSR873OML_counts_pattern_2.n_568-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR706BJO_ChIP_ZBTB11_K562_ENCSR873OML_counts_pattern_3.n_407-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR706BJO_ChIP_ZBTB11_K562_ENCSR873OML_counts_pattern_4.n_321-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR706BJO_ChIP_ZBTB11_K562_ENCSR873OML_counts_pattern_5.n_299-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR706BJO_ChIP_ZBTB11_K562_ENCSR873OML_counts_pattern_6.n_257-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR706BJO_ChIP_ZBTB11_K562_ENCSR873OML_counts_pattern_7.n_247-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR706BJO_ChIP_ZBTB11_K562_ENCSR873OML_counts_pattern_8.n_197-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR706BJO_ChIP_ZBTB11_K562_ENCSR873OML_counts_pattern_9.n_166-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR882ZTS_ChIP_ZBTB11_HEK293_ENCSR475ZNU_counts_pattern_0.n_14692-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR882ZTS_ChIP_ZBTB11_HEK293_ENCSR475ZNU_counts_pattern_1.n_6229-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR882ZTS_ChIP_ZBTB11_HEK293_ENCSR475ZNU_counts_pattern_2.n_2387-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR882ZTS_ChIP_ZBTB11_HEK293_ENCSR475ZNU_counts_pattern_3.n_408-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR882ZTS_ChIP_ZBTB11_HEK293_ENCSR475ZNU_counts_pattern_4.n_161-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR882ZTS_ChIP_ZBTB11_HEK293_ENCSR475ZNU_counts_pattern_5.n_118-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR882ZTS_ChIP_ZBTB11_HEK293_ENCSR475ZNU_counts_pattern_6.n_84-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR882ZTS_ChIP_ZBTB11_HEK293_ENCSR475ZNU_counts_pattern_7.n_32-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR985OYK_ChIP_ZBTB11_K562_ENCSR327WKX_counts_pattern_0.n_3704-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR985OYK_ChIP_ZBTB11_K562_ENCSR327WKX_counts_pattern_1.n_226-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR985OYK_ChIP_ZBTB11_K562_ENCSR327WKX_counts_pattern_2.n_126-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR985OYK_ChIP_ZBTB11_K562_ENCSR327WKX_counts_pattern_3.n_88-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR985OYK_ChIP_ZBTB11_K562_ENCSR327WKX_counts_pattern_4.n_41-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB11-203/pos_patterns.ENCSR985OYK_ChIP_ZBTB11_K562_ENCSR327WKX_counts_pattern_5.n_28-vs-ZBTB11-203.alignment counts-znf_b1h_alignment/ZBTB11-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB12-201/Hughes_GR_models_ZBTB12_counts-neg.pattern_0.n_37-vs-ZBTB12-201.alignment counts-znf_b1h_alignment/ZBTB12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB12-201/Hughes_GR_models_ZBTB12_counts-neg.pattern_1.n_30-vs-ZBTB12-201.alignment counts-znf_b1h_alignment/ZBTB12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB12-201/Hughes_GR_models_ZBTB12_counts-neg.pattern_2.n_26-vs-ZBTB12-201.alignment counts-znf_b1h_alignment/ZBTB12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB12-201/Hughes_NB_models_ZBTB12_counts-pos.pattern_0.n_657-vs-ZBTB12-201.alignment counts-znf_b1h_alignment/ZBTB12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB12-201/pos_patterns.ENCSR172OSX_ChIP_ZBTB12_K562_ENCSR147MFQ_counts_pattern_0.n_5337-vs-ZBTB12-201.alignment counts-znf_b1h_alignment/ZBTB12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB12-201/pos_patterns.ENCSR172OSX_ChIP_ZBTB12_K562_ENCSR147MFQ_counts_pattern_10.n_143-vs-ZBTB12-201.alignment counts-znf_b1h_alignment/ZBTB12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB12-201/pos_patterns.ENCSR172OSX_ChIP_ZBTB12_K562_ENCSR147MFQ_counts_pattern_11.n_100-vs-ZBTB12-201.alignment counts-znf_b1h_alignment/ZBTB12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB12-201/pos_patterns.ENCSR172OSX_ChIP_ZBTB12_K562_ENCSR147MFQ_counts_pattern_12.n_81-vs-ZBTB12-201.alignment counts-znf_b1h_alignment/ZBTB12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB12-201/pos_patterns.ENCSR172OSX_ChIP_ZBTB12_K562_ENCSR147MFQ_counts_pattern_13.n_64-vs-ZBTB12-201.alignment counts-znf_b1h_alignment/ZBTB12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB12-201/pos_patterns.ENCSR172OSX_ChIP_ZBTB12_K562_ENCSR147MFQ_counts_pattern_14.n_42-vs-ZBTB12-201.alignment counts-znf_b1h_alignment/ZBTB12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB12-201/pos_patterns.ENCSR172OSX_ChIP_ZBTB12_K562_ENCSR147MFQ_counts_pattern_15.n_21-vs-ZBTB12-201.alignment counts-znf_b1h_alignment/ZBTB12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB12-201/pos_patterns.ENCSR172OSX_ChIP_ZBTB12_K562_ENCSR147MFQ_counts_pattern_1.n_735-vs-ZBTB12-201.alignment counts-znf_b1h_alignment/ZBTB12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB12-201/pos_patterns.ENCSR172OSX_ChIP_ZBTB12_K562_ENCSR147MFQ_counts_pattern_2.n_578-vs-ZBTB12-201.alignment counts-znf_b1h_alignment/ZBTB12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB12-201/pos_patterns.ENCSR172OSX_ChIP_ZBTB12_K562_ENCSR147MFQ_counts_pattern_3.n_425-vs-ZBTB12-201.alignment counts-znf_b1h_alignment/ZBTB12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB12-201/pos_patterns.ENCSR172OSX_ChIP_ZBTB12_K562_ENCSR147MFQ_counts_pattern_4.n_366-vs-ZBTB12-201.alignment counts-znf_b1h_alignment/ZBTB12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB12-201/pos_patterns.ENCSR172OSX_ChIP_ZBTB12_K562_ENCSR147MFQ_counts_pattern_5.n_303-vs-ZBTB12-201.alignment counts-znf_b1h_alignment/ZBTB12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB12-201/pos_patterns.ENCSR172OSX_ChIP_ZBTB12_K562_ENCSR147MFQ_counts_pattern_6.n_287-vs-ZBTB12-201.alignment counts-znf_b1h_alignment/ZBTB12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB12-201/pos_patterns.ENCSR172OSX_ChIP_ZBTB12_K562_ENCSR147MFQ_counts_pattern_7.n_199-vs-ZBTB12-201.alignment counts-znf_b1h_alignment/ZBTB12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB12-201/pos_patterns.ENCSR172OSX_ChIP_ZBTB12_K562_ENCSR147MFQ_counts_pattern_8.n_179-vs-ZBTB12-201.alignment counts-znf_b1h_alignment/ZBTB12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB12-201/pos_patterns.ENCSR172OSX_ChIP_ZBTB12_K562_ENCSR147MFQ_counts_pattern_9.n_171-vs-ZBTB12-201.alignment counts-znf_b1h_alignment/ZBTB12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB12-201/pos_patterns.ENCSR543KOA_ChIP_ZBTB12_HEK293_ENCSR598KIL_counts_pattern_0.n_4826-vs-ZBTB12-201.alignment counts-znf_b1h_alignment/ZBTB12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB12-201/pos_patterns.ENCSR543KOA_ChIP_ZBTB12_HEK293_ENCSR598KIL_counts_pattern_1.n_43-vs-ZBTB12-201.alignment counts-znf_b1h_alignment/ZBTB12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB12-201/pos_patterns.ENCSR543KOA_ChIP_ZBTB12_HEK293_ENCSR598KIL_counts_pattern_2.n_29-vs-ZBTB12-201.alignment counts-znf_b1h_alignment/ZBTB12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB12-201/pos_patterns.ENCSR543KOA_ChIP_ZBTB12_HEK293_ENCSR598KIL_counts_pattern_3.n_22-vs-ZBTB12-201.alignment counts-znf_b1h_alignment/ZBTB12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB12-201/pos_patterns.ENCSR543KOA_ChIP_ZBTB12_HEK293_ENCSR598KIL_counts_pattern_4.n_20-vs-ZBTB12-201.alignment counts-znf_b1h_alignment/ZBTB12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB14-201/Hughes_GR_models_ZBTB14_counts-pos.pattern_0.n_7107-vs-ZBTB14-201.alignment counts-znf_b1h_alignment/ZBTB14-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB14-201/Hughes_GR_models_ZBTB14_counts-pos.pattern_1.n_626-vs-ZBTB14-201.alignment counts-znf_b1h_alignment/ZBTB14-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB14-201/Hughes_GR_models_ZBTB14_counts-pos.pattern_2.n_48-vs-ZBTB14-201.alignment counts-znf_b1h_alignment/ZBTB14-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB14-201/pos_patterns.ENCSR532WFC_ChIP_ZBTB14_HepG2_ENCSR818NPV_counts_pattern_0.n_7836-vs-ZBTB14-201.alignment counts-znf_b1h_alignment/ZBTB14-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB14-201/pos_patterns.ENCSR532WFC_ChIP_ZBTB14_HepG2_ENCSR818NPV_counts_pattern_1.n_71-vs-ZBTB14-201.alignment counts-znf_b1h_alignment/ZBTB14-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB14-201/pos_patterns.ENCSR532WFC_ChIP_ZBTB14_HepG2_ENCSR818NPV_counts_pattern_2.n_42-vs-ZBTB14-201.alignment counts-znf_b1h_alignment/ZBTB14-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/neg_patterns.ENCSR026KKZ_ChIP_ZBTB17_K562_ENCSR881YJN_counts_pattern_0.n_33-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/neg_patterns.ENCSR026KKZ_ChIP_ZBTB17_K562_ENCSR881YJN_counts_pattern_1.n_26-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/neg_patterns.ENCSR026KKZ_ChIP_ZBTB17_K562_ENCSR881YJN_counts_pattern_2.n_23-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/neg_patterns.ENCSR026KKZ_ChIP_ZBTB17_K562_ENCSR881YJN_counts_pattern_3.n_21-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/pos_patterns.ENCSR026KKZ_ChIP_ZBTB17_K562_ENCSR881YJN_counts_pattern_0.n_1297-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/pos_patterns.ENCSR026KKZ_ChIP_ZBTB17_K562_ENCSR881YJN_counts_pattern_10.n_35-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/pos_patterns.ENCSR026KKZ_ChIP_ZBTB17_K562_ENCSR881YJN_counts_pattern_11.n_29-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/pos_patterns.ENCSR026KKZ_ChIP_ZBTB17_K562_ENCSR881YJN_counts_pattern_12.n_27-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/pos_patterns.ENCSR026KKZ_ChIP_ZBTB17_K562_ENCSR881YJN_counts_pattern_13.n_20-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/pos_patterns.ENCSR026KKZ_ChIP_ZBTB17_K562_ENCSR881YJN_counts_pattern_1.n_1227-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/pos_patterns.ENCSR026KKZ_ChIP_ZBTB17_K562_ENCSR881YJN_counts_pattern_2.n_1058-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/pos_patterns.ENCSR026KKZ_ChIP_ZBTB17_K562_ENCSR881YJN_counts_pattern_3.n_938-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/pos_patterns.ENCSR026KKZ_ChIP_ZBTB17_K562_ENCSR881YJN_counts_pattern_4.n_193-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/pos_patterns.ENCSR026KKZ_ChIP_ZBTB17_K562_ENCSR881YJN_counts_pattern_5.n_178-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/pos_patterns.ENCSR026KKZ_ChIP_ZBTB17_K562_ENCSR881YJN_counts_pattern_6.n_86-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/pos_patterns.ENCSR026KKZ_ChIP_ZBTB17_K562_ENCSR881YJN_counts_pattern_7.n_59-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/pos_patterns.ENCSR026KKZ_ChIP_ZBTB17_K562_ENCSR881YJN_counts_pattern_8.n_54-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/pos_patterns.ENCSR026KKZ_ChIP_ZBTB17_K562_ENCSR881YJN_counts_pattern_9.n_39-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/pos_patterns.ENCSR631WAA_ChIP_ZBTB17_HEK293_ENCSR667GBL_counts_pattern_0.n_10751-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/pos_patterns.ENCSR631WAA_ChIP_ZBTB17_HEK293_ENCSR667GBL_counts_pattern_10.n_802-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/pos_patterns.ENCSR631WAA_ChIP_ZBTB17_HEK293_ENCSR667GBL_counts_pattern_11.n_776-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/pos_patterns.ENCSR631WAA_ChIP_ZBTB17_HEK293_ENCSR667GBL_counts_pattern_12.n_651-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/pos_patterns.ENCSR631WAA_ChIP_ZBTB17_HEK293_ENCSR667GBL_counts_pattern_13.n_616-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/pos_patterns.ENCSR631WAA_ChIP_ZBTB17_HEK293_ENCSR667GBL_counts_pattern_14.n_468-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/pos_patterns.ENCSR631WAA_ChIP_ZBTB17_HEK293_ENCSR667GBL_counts_pattern_15.n_461-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/pos_patterns.ENCSR631WAA_ChIP_ZBTB17_HEK293_ENCSR667GBL_counts_pattern_16.n_435-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/pos_patterns.ENCSR631WAA_ChIP_ZBTB17_HEK293_ENCSR667GBL_counts_pattern_17.n_405-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/pos_patterns.ENCSR631WAA_ChIP_ZBTB17_HEK293_ENCSR667GBL_counts_pattern_18.n_213-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/pos_patterns.ENCSR631WAA_ChIP_ZBTB17_HEK293_ENCSR667GBL_counts_pattern_19.n_160-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/pos_patterns.ENCSR631WAA_ChIP_ZBTB17_HEK293_ENCSR667GBL_counts_pattern_1.n_3568-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/pos_patterns.ENCSR631WAA_ChIP_ZBTB17_HEK293_ENCSR667GBL_counts_pattern_20.n_120-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/pos_patterns.ENCSR631WAA_ChIP_ZBTB17_HEK293_ENCSR667GBL_counts_pattern_21.n_119-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/pos_patterns.ENCSR631WAA_ChIP_ZBTB17_HEK293_ENCSR667GBL_counts_pattern_22.n_107-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/pos_patterns.ENCSR631WAA_ChIP_ZBTB17_HEK293_ENCSR667GBL_counts_pattern_23.n_51-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/pos_patterns.ENCSR631WAA_ChIP_ZBTB17_HEK293_ENCSR667GBL_counts_pattern_24.n_32-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/pos_patterns.ENCSR631WAA_ChIP_ZBTB17_HEK293_ENCSR667GBL_counts_pattern_25.n_32-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/pos_patterns.ENCSR631WAA_ChIP_ZBTB17_HEK293_ENCSR667GBL_counts_pattern_26.n_30-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/pos_patterns.ENCSR631WAA_ChIP_ZBTB17_HEK293_ENCSR667GBL_counts_pattern_2.n_3349-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/pos_patterns.ENCSR631WAA_ChIP_ZBTB17_HEK293_ENCSR667GBL_counts_pattern_3.n_3314-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/pos_patterns.ENCSR631WAA_ChIP_ZBTB17_HEK293_ENCSR667GBL_counts_pattern_4.n_2416-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/pos_patterns.ENCSR631WAA_ChIP_ZBTB17_HEK293_ENCSR667GBL_counts_pattern_5.n_2117-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/pos_patterns.ENCSR631WAA_ChIP_ZBTB17_HEK293_ENCSR667GBL_counts_pattern_6.n_2089-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/pos_patterns.ENCSR631WAA_ChIP_ZBTB17_HEK293_ENCSR667GBL_counts_pattern_7.n_1564-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/pos_patterns.ENCSR631WAA_ChIP_ZBTB17_HEK293_ENCSR667GBL_counts_pattern_8.n_1105-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB17-201/pos_patterns.ENCSR631WAA_ChIP_ZBTB17_HEK293_ENCSR667GBL_counts_pattern_9.n_820-vs-ZBTB17-201.alignment counts-znf_b1h_alignment/ZBTB17-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB20-201/pos_patterns.ENCSR392TWV_ChIP_ZBTB20_HepG2_ENCSR718MVW_counts_pattern_0.n_3758-vs-ZBTB20-201.alignment counts-znf_b1h_alignment/ZBTB20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB20-201/pos_patterns.ENCSR392TWV_ChIP_ZBTB20_HepG2_ENCSR718MVW_counts_pattern_10.n_70-vs-ZBTB20-201.alignment counts-znf_b1h_alignment/ZBTB20-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB20-201/pos_patterns.ENCSR392TWV_ChIP_ZBTB20_HepG2_ENCSR718MVW_counts_pattern_1.n_2524-vs-ZBTB20-201.alignment counts-znf_b1h_alignment/ZBTB20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB20-201/pos_patterns.ENCSR392TWV_ChIP_ZBTB20_HepG2_ENCSR718MVW_counts_pattern_2.n_1458-vs-ZBTB20-201.alignment counts-znf_b1h_alignment/ZBTB20-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB20-201/pos_patterns.ENCSR392TWV_ChIP_ZBTB20_HepG2_ENCSR718MVW_counts_pattern_4.n_814-vs-ZBTB20-201.alignment counts-znf_b1h_alignment/ZBTB20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB20-201/pos_patterns.ENCSR392TWV_ChIP_ZBTB20_HepG2_ENCSR718MVW_counts_pattern_5.n_492-vs-ZBTB20-201.alignment counts-znf_b1h_alignment/ZBTB20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB20-201/pos_patterns.ENCSR392TWV_ChIP_ZBTB20_HepG2_ENCSR718MVW_counts_pattern_6.n_433-vs-ZBTB20-201.alignment counts-znf_b1h_alignment/ZBTB20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB20-201/pos_patterns.ENCSR392TWV_ChIP_ZBTB20_HepG2_ENCSR718MVW_counts_pattern_7.n_361-vs-ZBTB20-201.alignment counts-znf_b1h_alignment/ZBTB20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB20-201/pos_patterns.ENCSR392TWV_ChIP_ZBTB20_HepG2_ENCSR718MVW_counts_pattern_8.n_232-vs-ZBTB20-201.alignment counts-znf_b1h_alignment/ZBTB20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB20-201/pos_patterns.ENCSR392TWV_ChIP_ZBTB20_HepG2_ENCSR718MVW_counts_pattern_9.n_113-vs-ZBTB20-201.alignment counts-znf_b1h_alignment/ZBTB20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB20-201/pos_patterns.ENCSR460MBI_ChIP_ZBTB20_HEK293_ENCSR031BHK_counts_pattern_0.n_6176-vs-ZBTB20-201.alignment counts-znf_b1h_alignment/ZBTB20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB20-201/pos_patterns.ENCSR460MBI_ChIP_ZBTB20_HEK293_ENCSR031BHK_counts_pattern_1.n_5320-vs-ZBTB20-201.alignment counts-znf_b1h_alignment/ZBTB20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB20-201/pos_patterns.ENCSR460MBI_ChIP_ZBTB20_HEK293_ENCSR031BHK_counts_pattern_2.n_4847-vs-ZBTB20-201.alignment counts-znf_b1h_alignment/ZBTB20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB20-201/pos_patterns.ENCSR460MBI_ChIP_ZBTB20_HEK293_ENCSR031BHK_counts_pattern_3.n_4749-vs-ZBTB20-201.alignment counts-znf_b1h_alignment/ZBTB20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB20-201/pos_patterns.ENCSR460MBI_ChIP_ZBTB20_HEK293_ENCSR031BHK_counts_pattern_4.n_123-vs-ZBTB20-201.alignment counts-znf_b1h_alignment/ZBTB20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-201/pos_patterns.ENCSR321MSF_ChIP_ZBTB21_HEK293_ENCSR374BHO_counts_pattern_0.n_7067-vs-ZBTB21-201.alignment counts-znf_b1h_alignment/ZBTB21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-201/pos_patterns.ENCSR321MSF_ChIP_ZBTB21_HEK293_ENCSR374BHO_counts_pattern_10.n_27-vs-ZBTB21-201.alignment counts-znf_b1h_alignment/ZBTB21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-201/pos_patterns.ENCSR321MSF_ChIP_ZBTB21_HEK293_ENCSR374BHO_counts_pattern_1.n_5757-vs-ZBTB21-201.alignment counts-znf_b1h_alignment/ZBTB21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-201/pos_patterns.ENCSR321MSF_ChIP_ZBTB21_HEK293_ENCSR374BHO_counts_pattern_2.n_3678-vs-ZBTB21-201.alignment counts-znf_b1h_alignment/ZBTB21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-201/pos_patterns.ENCSR321MSF_ChIP_ZBTB21_HEK293_ENCSR374BHO_counts_pattern_3.n_2147-vs-ZBTB21-201.alignment counts-znf_b1h_alignment/ZBTB21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-201/pos_patterns.ENCSR321MSF_ChIP_ZBTB21_HEK293_ENCSR374BHO_counts_pattern_4.n_677-vs-ZBTB21-201.alignment counts-znf_b1h_alignment/ZBTB21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-201/pos_patterns.ENCSR321MSF_ChIP_ZBTB21_HEK293_ENCSR374BHO_counts_pattern_5.n_204-vs-ZBTB21-201.alignment counts-znf_b1h_alignment/ZBTB21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-201/pos_patterns.ENCSR321MSF_ChIP_ZBTB21_HEK293_ENCSR374BHO_counts_pattern_6.n_113-vs-ZBTB21-201.alignment counts-znf_b1h_alignment/ZBTB21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-201/pos_patterns.ENCSR321MSF_ChIP_ZBTB21_HEK293_ENCSR374BHO_counts_pattern_7.n_89-vs-ZBTB21-201.alignment counts-znf_b1h_alignment/ZBTB21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-201/pos_patterns.ENCSR321MSF_ChIP_ZBTB21_HEK293_ENCSR374BHO_counts_pattern_8.n_85-vs-ZBTB21-201.alignment counts-znf_b1h_alignment/ZBTB21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-201/pos_patterns.ENCSR321MSF_ChIP_ZBTB21_HEK293_ENCSR374BHO_counts_pattern_9.n_36-vs-ZBTB21-201.alignment counts-znf_b1h_alignment/ZBTB21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-201/pos_patterns.ENCSR549PAU_ChIP_ZBTB21_HepG2_ENCSR546ZRV_counts_pattern_0.n_3540-vs-ZBTB21-201.alignment counts-znf_b1h_alignment/ZBTB21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-201/pos_patterns.ENCSR549PAU_ChIP_ZBTB21_HepG2_ENCSR546ZRV_counts_pattern_1.n_2189-vs-ZBTB21-201.alignment counts-znf_b1h_alignment/ZBTB21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-201/pos_patterns.ENCSR549PAU_ChIP_ZBTB21_HepG2_ENCSR546ZRV_counts_pattern_2.n_780-vs-ZBTB21-201.alignment counts-znf_b1h_alignment/ZBTB21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-201/pos_patterns.ENCSR549PAU_ChIP_ZBTB21_HepG2_ENCSR546ZRV_counts_pattern_3.n_637-vs-ZBTB21-201.alignment counts-znf_b1h_alignment/ZBTB21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-201/pos_patterns.ENCSR549PAU_ChIP_ZBTB21_HepG2_ENCSR546ZRV_counts_pattern_4.n_390-vs-ZBTB21-201.alignment counts-znf_b1h_alignment/ZBTB21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-201/pos_patterns.ENCSR549PAU_ChIP_ZBTB21_HepG2_ENCSR546ZRV_counts_pattern_5.n_360-vs-ZBTB21-201.alignment counts-znf_b1h_alignment/ZBTB21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-201/pos_patterns.ENCSR549PAU_ChIP_ZBTB21_HepG2_ENCSR546ZRV_counts_pattern_6.n_313-vs-ZBTB21-201.alignment counts-znf_b1h_alignment/ZBTB21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-201/pos_patterns.ENCSR549PAU_ChIP_ZBTB21_HepG2_ENCSR546ZRV_counts_pattern_7.n_276-vs-ZBTB21-201.alignment counts-znf_b1h_alignment/ZBTB21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-201/pos_patterns.ENCSR549PAU_ChIP_ZBTB21_HepG2_ENCSR546ZRV_counts_pattern_8.n_84-vs-ZBTB21-201.alignment counts-znf_b1h_alignment/ZBTB21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-201/pos_patterns.ENCSR962BEI_ChIP_ZBTB21_WTC11_ENCSR118JRA_counts_pattern_0.n_1235-vs-ZBTB21-201.alignment counts-znf_b1h_alignment/ZBTB21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-201/pos_patterns.ENCSR962BEI_ChIP_ZBTB21_WTC11_ENCSR118JRA_counts_pattern_10.n_95-vs-ZBTB21-201.alignment counts-znf_b1h_alignment/ZBTB21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-201/pos_patterns.ENCSR962BEI_ChIP_ZBTB21_WTC11_ENCSR118JRA_counts_pattern_11.n_81-vs-ZBTB21-201.alignment counts-znf_b1h_alignment/ZBTB21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-201/pos_patterns.ENCSR962BEI_ChIP_ZBTB21_WTC11_ENCSR118JRA_counts_pattern_12.n_75-vs-ZBTB21-201.alignment counts-znf_b1h_alignment/ZBTB21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-201/pos_patterns.ENCSR962BEI_ChIP_ZBTB21_WTC11_ENCSR118JRA_counts_pattern_13.n_65-vs-ZBTB21-201.alignment counts-znf_b1h_alignment/ZBTB21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-201/pos_patterns.ENCSR962BEI_ChIP_ZBTB21_WTC11_ENCSR118JRA_counts_pattern_14.n_28-vs-ZBTB21-201.alignment counts-znf_b1h_alignment/ZBTB21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-201/pos_patterns.ENCSR962BEI_ChIP_ZBTB21_WTC11_ENCSR118JRA_counts_pattern_1.n_888-vs-ZBTB21-201.alignment counts-znf_b1h_alignment/ZBTB21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-201/pos_patterns.ENCSR962BEI_ChIP_ZBTB21_WTC11_ENCSR118JRA_counts_pattern_2.n_708-vs-ZBTB21-201.alignment counts-znf_b1h_alignment/ZBTB21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-201/pos_patterns.ENCSR962BEI_ChIP_ZBTB21_WTC11_ENCSR118JRA_counts_pattern_3.n_687-vs-ZBTB21-201.alignment counts-znf_b1h_alignment/ZBTB21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-201/pos_patterns.ENCSR962BEI_ChIP_ZBTB21_WTC11_ENCSR118JRA_counts_pattern_4.n_487-vs-ZBTB21-201.alignment counts-znf_b1h_alignment/ZBTB21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-201/pos_patterns.ENCSR962BEI_ChIP_ZBTB21_WTC11_ENCSR118JRA_counts_pattern_5.n_335-vs-ZBTB21-201.alignment counts-znf_b1h_alignment/ZBTB21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-201/pos_patterns.ENCSR962BEI_ChIP_ZBTB21_WTC11_ENCSR118JRA_counts_pattern_6.n_302-vs-ZBTB21-201.alignment counts-znf_b1h_alignment/ZBTB21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-201/pos_patterns.ENCSR962BEI_ChIP_ZBTB21_WTC11_ENCSR118JRA_counts_pattern_7.n_297-vs-ZBTB21-201.alignment counts-znf_b1h_alignment/ZBTB21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-201/pos_patterns.ENCSR962BEI_ChIP_ZBTB21_WTC11_ENCSR118JRA_counts_pattern_8.n_225-vs-ZBTB21-201.alignment counts-znf_b1h_alignment/ZBTB21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-201/pos_patterns.ENCSR962BEI_ChIP_ZBTB21_WTC11_ENCSR118JRA_counts_pattern_9.n_208-vs-ZBTB21-201.alignment counts-znf_b1h_alignment/ZBTB21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-204/pos_patterns.ENCSR321MSF_ChIP_ZBTB21_HEK293_ENCSR374BHO_counts_pattern_0.n_7067-vs-ZBTB21-204.alignment counts-znf_b1h_alignment/ZBTB21-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-204/pos_patterns.ENCSR321MSF_ChIP_ZBTB21_HEK293_ENCSR374BHO_counts_pattern_10.n_27-vs-ZBTB21-204.alignment counts-znf_b1h_alignment/ZBTB21-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-204/pos_patterns.ENCSR321MSF_ChIP_ZBTB21_HEK293_ENCSR374BHO_counts_pattern_1.n_5757-vs-ZBTB21-204.alignment counts-znf_b1h_alignment/ZBTB21-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-204/pos_patterns.ENCSR321MSF_ChIP_ZBTB21_HEK293_ENCSR374BHO_counts_pattern_2.n_3678-vs-ZBTB21-204.alignment counts-znf_b1h_alignment/ZBTB21-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-204/pos_patterns.ENCSR321MSF_ChIP_ZBTB21_HEK293_ENCSR374BHO_counts_pattern_3.n_2147-vs-ZBTB21-204.alignment counts-znf_b1h_alignment/ZBTB21-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-204/pos_patterns.ENCSR321MSF_ChIP_ZBTB21_HEK293_ENCSR374BHO_counts_pattern_4.n_677-vs-ZBTB21-204.alignment counts-znf_b1h_alignment/ZBTB21-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-204/pos_patterns.ENCSR321MSF_ChIP_ZBTB21_HEK293_ENCSR374BHO_counts_pattern_5.n_204-vs-ZBTB21-204.alignment counts-znf_b1h_alignment/ZBTB21-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-204/pos_patterns.ENCSR321MSF_ChIP_ZBTB21_HEK293_ENCSR374BHO_counts_pattern_6.n_113-vs-ZBTB21-204.alignment counts-znf_b1h_alignment/ZBTB21-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-204/pos_patterns.ENCSR321MSF_ChIP_ZBTB21_HEK293_ENCSR374BHO_counts_pattern_7.n_89-vs-ZBTB21-204.alignment counts-znf_b1h_alignment/ZBTB21-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-204/pos_patterns.ENCSR321MSF_ChIP_ZBTB21_HEK293_ENCSR374BHO_counts_pattern_8.n_85-vs-ZBTB21-204.alignment counts-znf_b1h_alignment/ZBTB21-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-204/pos_patterns.ENCSR321MSF_ChIP_ZBTB21_HEK293_ENCSR374BHO_counts_pattern_9.n_36-vs-ZBTB21-204.alignment counts-znf_b1h_alignment/ZBTB21-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-204/pos_patterns.ENCSR549PAU_ChIP_ZBTB21_HepG2_ENCSR546ZRV_counts_pattern_0.n_3540-vs-ZBTB21-204.alignment counts-znf_b1h_alignment/ZBTB21-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-204/pos_patterns.ENCSR549PAU_ChIP_ZBTB21_HepG2_ENCSR546ZRV_counts_pattern_1.n_2189-vs-ZBTB21-204.alignment counts-znf_b1h_alignment/ZBTB21-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-204/pos_patterns.ENCSR549PAU_ChIP_ZBTB21_HepG2_ENCSR546ZRV_counts_pattern_2.n_780-vs-ZBTB21-204.alignment counts-znf_b1h_alignment/ZBTB21-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-204/pos_patterns.ENCSR549PAU_ChIP_ZBTB21_HepG2_ENCSR546ZRV_counts_pattern_3.n_637-vs-ZBTB21-204.alignment counts-znf_b1h_alignment/ZBTB21-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-204/pos_patterns.ENCSR549PAU_ChIP_ZBTB21_HepG2_ENCSR546ZRV_counts_pattern_4.n_390-vs-ZBTB21-204.alignment counts-znf_b1h_alignment/ZBTB21-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-204/pos_patterns.ENCSR549PAU_ChIP_ZBTB21_HepG2_ENCSR546ZRV_counts_pattern_5.n_360-vs-ZBTB21-204.alignment counts-znf_b1h_alignment/ZBTB21-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-204/pos_patterns.ENCSR549PAU_ChIP_ZBTB21_HepG2_ENCSR546ZRV_counts_pattern_6.n_313-vs-ZBTB21-204.alignment counts-znf_b1h_alignment/ZBTB21-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-204/pos_patterns.ENCSR549PAU_ChIP_ZBTB21_HepG2_ENCSR546ZRV_counts_pattern_7.n_276-vs-ZBTB21-204.alignment counts-znf_b1h_alignment/ZBTB21-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-204/pos_patterns.ENCSR549PAU_ChIP_ZBTB21_HepG2_ENCSR546ZRV_counts_pattern_8.n_84-vs-ZBTB21-204.alignment counts-znf_b1h_alignment/ZBTB21-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-204/pos_patterns.ENCSR962BEI_ChIP_ZBTB21_WTC11_ENCSR118JRA_counts_pattern_0.n_1235-vs-ZBTB21-204.alignment counts-znf_b1h_alignment/ZBTB21-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-204/pos_patterns.ENCSR962BEI_ChIP_ZBTB21_WTC11_ENCSR118JRA_counts_pattern_10.n_95-vs-ZBTB21-204.alignment counts-znf_b1h_alignment/ZBTB21-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-204/pos_patterns.ENCSR962BEI_ChIP_ZBTB21_WTC11_ENCSR118JRA_counts_pattern_11.n_81-vs-ZBTB21-204.alignment counts-znf_b1h_alignment/ZBTB21-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-204/pos_patterns.ENCSR962BEI_ChIP_ZBTB21_WTC11_ENCSR118JRA_counts_pattern_12.n_75-vs-ZBTB21-204.alignment counts-znf_b1h_alignment/ZBTB21-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-204/pos_patterns.ENCSR962BEI_ChIP_ZBTB21_WTC11_ENCSR118JRA_counts_pattern_13.n_65-vs-ZBTB21-204.alignment counts-znf_b1h_alignment/ZBTB21-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-204/pos_patterns.ENCSR962BEI_ChIP_ZBTB21_WTC11_ENCSR118JRA_counts_pattern_14.n_28-vs-ZBTB21-204.alignment counts-znf_b1h_alignment/ZBTB21-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-204/pos_patterns.ENCSR962BEI_ChIP_ZBTB21_WTC11_ENCSR118JRA_counts_pattern_1.n_888-vs-ZBTB21-204.alignment counts-znf_b1h_alignment/ZBTB21-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-204/pos_patterns.ENCSR962BEI_ChIP_ZBTB21_WTC11_ENCSR118JRA_counts_pattern_2.n_708-vs-ZBTB21-204.alignment counts-znf_b1h_alignment/ZBTB21-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-204/pos_patterns.ENCSR962BEI_ChIP_ZBTB21_WTC11_ENCSR118JRA_counts_pattern_3.n_687-vs-ZBTB21-204.alignment counts-znf_b1h_alignment/ZBTB21-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-204/pos_patterns.ENCSR962BEI_ChIP_ZBTB21_WTC11_ENCSR118JRA_counts_pattern_4.n_487-vs-ZBTB21-204.alignment counts-znf_b1h_alignment/ZBTB21-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-204/pos_patterns.ENCSR962BEI_ChIP_ZBTB21_WTC11_ENCSR118JRA_counts_pattern_5.n_335-vs-ZBTB21-204.alignment counts-znf_b1h_alignment/ZBTB21-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-204/pos_patterns.ENCSR962BEI_ChIP_ZBTB21_WTC11_ENCSR118JRA_counts_pattern_6.n_302-vs-ZBTB21-204.alignment counts-znf_b1h_alignment/ZBTB21-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-204/pos_patterns.ENCSR962BEI_ChIP_ZBTB21_WTC11_ENCSR118JRA_counts_pattern_7.n_297-vs-ZBTB21-204.alignment counts-znf_b1h_alignment/ZBTB21-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-204/pos_patterns.ENCSR962BEI_ChIP_ZBTB21_WTC11_ENCSR118JRA_counts_pattern_8.n_225-vs-ZBTB21-204.alignment counts-znf_b1h_alignment/ZBTB21-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB21-204/pos_patterns.ENCSR962BEI_ChIP_ZBTB21_WTC11_ENCSR118JRA_counts_pattern_9.n_208-vs-ZBTB21-204.alignment counts-znf_b1h_alignment/ZBTB21-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB2-201/pos_patterns.ENCSR175MIA_ChIP_ZBTB2_HepG2_ENCSR356QWJ_counts_pattern_0.n_2640-vs-ZBTB2-201.alignment counts-znf_b1h_alignment/ZBTB2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB2-201/pos_patterns.ENCSR175MIA_ChIP_ZBTB2_HepG2_ENCSR356QWJ_counts_pattern_10.n_41-vs-ZBTB2-201.alignment counts-znf_b1h_alignment/ZBTB2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB2-201/pos_patterns.ENCSR175MIA_ChIP_ZBTB2_HepG2_ENCSR356QWJ_counts_pattern_11.n_31-vs-ZBTB2-201.alignment counts-znf_b1h_alignment/ZBTB2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB2-201/pos_patterns.ENCSR175MIA_ChIP_ZBTB2_HepG2_ENCSR356QWJ_counts_pattern_12.n_23-vs-ZBTB2-201.alignment counts-znf_b1h_alignment/ZBTB2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB2-201/pos_patterns.ENCSR175MIA_ChIP_ZBTB2_HepG2_ENCSR356QWJ_counts_pattern_1.n_2438-vs-ZBTB2-201.alignment counts-znf_b1h_alignment/ZBTB2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB2-201/pos_patterns.ENCSR175MIA_ChIP_ZBTB2_HepG2_ENCSR356QWJ_counts_pattern_2.n_1481-vs-ZBTB2-201.alignment counts-znf_b1h_alignment/ZBTB2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB2-201/pos_patterns.ENCSR175MIA_ChIP_ZBTB2_HepG2_ENCSR356QWJ_counts_pattern_3.n_1036-vs-ZBTB2-201.alignment counts-znf_b1h_alignment/ZBTB2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB2-201/pos_patterns.ENCSR175MIA_ChIP_ZBTB2_HepG2_ENCSR356QWJ_counts_pattern_4.n_330-vs-ZBTB2-201.alignment counts-znf_b1h_alignment/ZBTB2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB2-201/pos_patterns.ENCSR175MIA_ChIP_ZBTB2_HepG2_ENCSR356QWJ_counts_pattern_5.n_316-vs-ZBTB2-201.alignment counts-znf_b1h_alignment/ZBTB2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB2-201/pos_patterns.ENCSR175MIA_ChIP_ZBTB2_HepG2_ENCSR356QWJ_counts_pattern_6.n_140-vs-ZBTB2-201.alignment counts-znf_b1h_alignment/ZBTB2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB2-201/pos_patterns.ENCSR175MIA_ChIP_ZBTB2_HepG2_ENCSR356QWJ_counts_pattern_7.n_123-vs-ZBTB2-201.alignment counts-znf_b1h_alignment/ZBTB2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB2-201/pos_patterns.ENCSR175MIA_ChIP_ZBTB2_HepG2_ENCSR356QWJ_counts_pattern_8.n_87-vs-ZBTB2-201.alignment counts-znf_b1h_alignment/ZBTB2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB2-201/pos_patterns.ENCSR175MIA_ChIP_ZBTB2_HepG2_ENCSR356QWJ_counts_pattern_9.n_56-vs-ZBTB2-201.alignment counts-znf_b1h_alignment/ZBTB2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB2-201/pos_patterns.ENCSR230PTV_ChIP_ZBTB2_K562_ENCSR289WHI_counts_pattern_0.n_4170-vs-ZBTB2-201.alignment counts-znf_b1h_alignment/ZBTB2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB2-201/pos_patterns.ENCSR230PTV_ChIP_ZBTB2_K562_ENCSR289WHI_counts_pattern_1.n_1832-vs-ZBTB2-201.alignment counts-znf_b1h_alignment/ZBTB2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB2-201/pos_patterns.ENCSR230PTV_ChIP_ZBTB2_K562_ENCSR289WHI_counts_pattern_2.n_1141-vs-ZBTB2-201.alignment counts-znf_b1h_alignment/ZBTB2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB2-201/pos_patterns.ENCSR230PTV_ChIP_ZBTB2_K562_ENCSR289WHI_counts_pattern_3.n_641-vs-ZBTB2-201.alignment counts-znf_b1h_alignment/ZBTB2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB2-201/pos_patterns.ENCSR230PTV_ChIP_ZBTB2_K562_ENCSR289WHI_counts_pattern_4.n_441-vs-ZBTB2-201.alignment counts-znf_b1h_alignment/ZBTB2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB2-201/pos_patterns.ENCSR230PTV_ChIP_ZBTB2_K562_ENCSR289WHI_counts_pattern_5.n_307-vs-ZBTB2-201.alignment counts-znf_b1h_alignment/ZBTB2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB2-201/pos_patterns.ENCSR230PTV_ChIP_ZBTB2_K562_ENCSR289WHI_counts_pattern_6.n_173-vs-ZBTB2-201.alignment counts-znf_b1h_alignment/ZBTB2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB2-201/pos_patterns.ENCSR230PTV_ChIP_ZBTB2_K562_ENCSR289WHI_counts_pattern_7.n_109-vs-ZBTB2-201.alignment counts-znf_b1h_alignment/ZBTB2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB2-201/pos_patterns.ENCSR230PTV_ChIP_ZBTB2_K562_ENCSR289WHI_counts_pattern_8.n_65-vs-ZBTB2-201.alignment counts-znf_b1h_alignment/ZBTB2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB2-201/pos_patterns.ENCSR230PTV_ChIP_ZBTB2_K562_ENCSR289WHI_counts_pattern_9.n_37-vs-ZBTB2-201.alignment counts-znf_b1h_alignment/ZBTB2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB24-201/pos_patterns.ENCSR396XDF_ChIP_ZBTB24_HepG2_ENCSR790EDJ_counts_pattern_0.n_550-vs-ZBTB24-201.alignment counts-znf_b1h_alignment/ZBTB24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB24-201/pos_patterns.ENCSR396XDF_ChIP_ZBTB24_HepG2_ENCSR790EDJ_counts_pattern_1.n_63-vs-ZBTB24-201.alignment counts-znf_b1h_alignment/ZBTB24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB24-201/pos_patterns.ENCSR396XDF_ChIP_ZBTB24_HepG2_ENCSR790EDJ_counts_pattern_2.n_49-vs-ZBTB24-201.alignment counts-znf_b1h_alignment/ZBTB24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB25-201/pos_patterns.ENCSR485OYR_ChIP_ZBTB25_HepG2_ENCSR734ZTT_counts_pattern_0.n_4000-vs-ZBTB25-201.alignment counts-znf_b1h_alignment/ZBTB25-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB25-201/pos_patterns.ENCSR485OYR_ChIP_ZBTB25_HepG2_ENCSR734ZTT_counts_pattern_1.n_2683-vs-ZBTB25-201.alignment counts-znf_b1h_alignment/ZBTB25-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB25-201/pos_patterns.ENCSR485OYR_ChIP_ZBTB25_HepG2_ENCSR734ZTT_counts_pattern_2.n_1820-vs-ZBTB25-201.alignment counts-znf_b1h_alignment/ZBTB25-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB25-201/pos_patterns.ENCSR485OYR_ChIP_ZBTB25_HepG2_ENCSR734ZTT_counts_pattern_3.n_1620-vs-ZBTB25-201.alignment counts-znf_b1h_alignment/ZBTB25-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB25-201/pos_patterns.ENCSR485OYR_ChIP_ZBTB25_HepG2_ENCSR734ZTT_counts_pattern_4.n_1618-vs-ZBTB25-201.alignment counts-znf_b1h_alignment/ZBTB25-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB25-201/pos_patterns.ENCSR485OYR_ChIP_ZBTB25_HepG2_ENCSR734ZTT_counts_pattern_5.n_613-vs-ZBTB25-201.alignment counts-znf_b1h_alignment/ZBTB25-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB25-201/pos_patterns.ENCSR485OYR_ChIP_ZBTB25_HepG2_ENCSR734ZTT_counts_pattern_6.n_429-vs-ZBTB25-201.alignment counts-znf_b1h_alignment/ZBTB25-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB25-201/pos_patterns.ENCSR485OYR_ChIP_ZBTB25_HepG2_ENCSR734ZTT_counts_pattern_7.n_329-vs-ZBTB25-201.alignment counts-znf_b1h_alignment/ZBTB25-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB25-201/pos_patterns.ENCSR485OYR_ChIP_ZBTB25_HepG2_ENCSR734ZTT_counts_pattern_8.n_194-vs-ZBTB25-201.alignment counts-znf_b1h_alignment/ZBTB25-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB25-201/pos_patterns.ENCSR485OYR_ChIP_ZBTB25_HepG2_ENCSR734ZTT_counts_pattern_9.n_33-vs-ZBTB25-201.alignment counts-znf_b1h_alignment/ZBTB25-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB25-203/pos_patterns.ENCSR485OYR_ChIP_ZBTB25_HepG2_ENCSR734ZTT_counts_pattern_0.n_4000-vs-ZBTB25-203.alignment counts-znf_b1h_alignment/ZBTB25-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB25-203/pos_patterns.ENCSR485OYR_ChIP_ZBTB25_HepG2_ENCSR734ZTT_counts_pattern_1.n_2683-vs-ZBTB25-203.alignment counts-znf_b1h_alignment/ZBTB25-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB25-203/pos_patterns.ENCSR485OYR_ChIP_ZBTB25_HepG2_ENCSR734ZTT_counts_pattern_2.n_1820-vs-ZBTB25-203.alignment counts-znf_b1h_alignment/ZBTB25-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB25-203/pos_patterns.ENCSR485OYR_ChIP_ZBTB25_HepG2_ENCSR734ZTT_counts_pattern_3.n_1620-vs-ZBTB25-203.alignment counts-znf_b1h_alignment/ZBTB25-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB25-203/pos_patterns.ENCSR485OYR_ChIP_ZBTB25_HepG2_ENCSR734ZTT_counts_pattern_4.n_1618-vs-ZBTB25-203.alignment counts-znf_b1h_alignment/ZBTB25-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB25-203/pos_patterns.ENCSR485OYR_ChIP_ZBTB25_HepG2_ENCSR734ZTT_counts_pattern_5.n_613-vs-ZBTB25-203.alignment counts-znf_b1h_alignment/ZBTB25-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB25-203/pos_patterns.ENCSR485OYR_ChIP_ZBTB25_HepG2_ENCSR734ZTT_counts_pattern_6.n_429-vs-ZBTB25-203.alignment counts-znf_b1h_alignment/ZBTB25-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB25-203/pos_patterns.ENCSR485OYR_ChIP_ZBTB25_HepG2_ENCSR734ZTT_counts_pattern_7.n_329-vs-ZBTB25-203.alignment counts-znf_b1h_alignment/ZBTB25-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB25-203/pos_patterns.ENCSR485OYR_ChIP_ZBTB25_HepG2_ENCSR734ZTT_counts_pattern_8.n_194-vs-ZBTB25-203.alignment counts-znf_b1h_alignment/ZBTB25-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB25-203/pos_patterns.ENCSR485OYR_ChIP_ZBTB25_HepG2_ENCSR734ZTT_counts_pattern_9.n_33-vs-ZBTB25-203.alignment counts-znf_b1h_alignment/ZBTB25-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB26-201/Hughes_GR_models_ZBTB26_counts-pos.pattern_0.n_6840-vs-ZBTB26-201.alignment counts-znf_b1h_alignment/ZBTB26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB26-201/Hughes_GR_models_ZBTB26_counts-pos.pattern_1.n_482-vs-ZBTB26-201.alignment counts-znf_b1h_alignment/ZBTB26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB26-201/Hughes_GR_models_ZBTB26_counts-pos.pattern_2.n_56-vs-ZBTB26-201.alignment counts-znf_b1h_alignment/ZBTB26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB26-201/Hughes_GR_models_ZBTB26_counts-pos.pattern_3.n_53-vs-ZBTB26-201.alignment counts-znf_b1h_alignment/ZBTB26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB26-201/Hughes_GR_models_ZBTB26_counts-pos.pattern_4.n_39-vs-ZBTB26-201.alignment counts-znf_b1h_alignment/ZBTB26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB26-201/neg_patterns.ENCSR184SVO_ChIP_ZBTB26_HepG2_ENCSR326ECX_counts_pattern_0.n_44-vs-ZBTB26-201.alignment counts-znf_b1h_alignment/ZBTB26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB26-201/neg_patterns.ENCSR184SVO_ChIP_ZBTB26_HepG2_ENCSR326ECX_counts_pattern_1.n_30-vs-ZBTB26-201.alignment counts-znf_b1h_alignment/ZBTB26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB26-201/neg_patterns.ENCSR184SVO_ChIP_ZBTB26_HepG2_ENCSR326ECX_counts_pattern_2.n_26-vs-ZBTB26-201.alignment counts-znf_b1h_alignment/ZBTB26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB26-201/neg_patterns.ENCSR184SVO_ChIP_ZBTB26_HepG2_ENCSR326ECX_counts_pattern_3.n_23-vs-ZBTB26-201.alignment counts-znf_b1h_alignment/ZBTB26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB26-201/pos_patterns.ENCSR115HLM_ChIP_ZBTB26_K562_ENCSR214WEP_counts_pattern_0.n_1183-vs-ZBTB26-201.alignment counts-znf_b1h_alignment/ZBTB26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB26-201/pos_patterns.ENCSR115HLM_ChIP_ZBTB26_K562_ENCSR214WEP_counts_pattern_1.n_1127-vs-ZBTB26-201.alignment counts-znf_b1h_alignment/ZBTB26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB26-201/pos_patterns.ENCSR115HLM_ChIP_ZBTB26_K562_ENCSR214WEP_counts_pattern_2.n_791-vs-ZBTB26-201.alignment counts-znf_b1h_alignment/ZBTB26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB26-201/pos_patterns.ENCSR115HLM_ChIP_ZBTB26_K562_ENCSR214WEP_counts_pattern_3.n_373-vs-ZBTB26-201.alignment counts-znf_b1h_alignment/ZBTB26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB26-201/pos_patterns.ENCSR115HLM_ChIP_ZBTB26_K562_ENCSR214WEP_counts_pattern_4.n_335-vs-ZBTB26-201.alignment counts-znf_b1h_alignment/ZBTB26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB26-201/pos_patterns.ENCSR115HLM_ChIP_ZBTB26_K562_ENCSR214WEP_counts_pattern_5.n_289-vs-ZBTB26-201.alignment counts-znf_b1h_alignment/ZBTB26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB26-201/pos_patterns.ENCSR115HLM_ChIP_ZBTB26_K562_ENCSR214WEP_counts_pattern_6.n_143-vs-ZBTB26-201.alignment counts-znf_b1h_alignment/ZBTB26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB26-201/pos_patterns.ENCSR115HLM_ChIP_ZBTB26_K562_ENCSR214WEP_counts_pattern_7.n_120-vs-ZBTB26-201.alignment counts-znf_b1h_alignment/ZBTB26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB26-201/pos_patterns.ENCSR115HLM_ChIP_ZBTB26_K562_ENCSR214WEP_counts_pattern_8.n_28-vs-ZBTB26-201.alignment counts-znf_b1h_alignment/ZBTB26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB26-201/pos_patterns.ENCSR115HLM_ChIP_ZBTB26_K562_ENCSR214WEP_counts_pattern_9.n_23-vs-ZBTB26-201.alignment counts-znf_b1h_alignment/ZBTB26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB26-201/pos_patterns.ENCSR184SVO_ChIP_ZBTB26_HepG2_ENCSR326ECX_counts_pattern_0.n_3525-vs-ZBTB26-201.alignment counts-znf_b1h_alignment/ZBTB26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB26-201/pos_patterns.ENCSR184SVO_ChIP_ZBTB26_HepG2_ENCSR326ECX_counts_pattern_10.n_99-vs-ZBTB26-201.alignment counts-znf_b1h_alignment/ZBTB26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB26-201/pos_patterns.ENCSR184SVO_ChIP_ZBTB26_HepG2_ENCSR326ECX_counts_pattern_11.n_94-vs-ZBTB26-201.alignment counts-znf_b1h_alignment/ZBTB26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB26-201/pos_patterns.ENCSR184SVO_ChIP_ZBTB26_HepG2_ENCSR326ECX_counts_pattern_12.n_50-vs-ZBTB26-201.alignment counts-znf_b1h_alignment/ZBTB26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB26-201/pos_patterns.ENCSR184SVO_ChIP_ZBTB26_HepG2_ENCSR326ECX_counts_pattern_13.n_29-vs-ZBTB26-201.alignment counts-znf_b1h_alignment/ZBTB26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB26-201/pos_patterns.ENCSR184SVO_ChIP_ZBTB26_HepG2_ENCSR326ECX_counts_pattern_14.n_29-vs-ZBTB26-201.alignment counts-znf_b1h_alignment/ZBTB26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB26-201/pos_patterns.ENCSR184SVO_ChIP_ZBTB26_HepG2_ENCSR326ECX_counts_pattern_1.n_1613-vs-ZBTB26-201.alignment counts-znf_b1h_alignment/ZBTB26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB26-201/pos_patterns.ENCSR184SVO_ChIP_ZBTB26_HepG2_ENCSR326ECX_counts_pattern_2.n_1014-vs-ZBTB26-201.alignment counts-znf_b1h_alignment/ZBTB26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB26-201/pos_patterns.ENCSR184SVO_ChIP_ZBTB26_HepG2_ENCSR326ECX_counts_pattern_3.n_763-vs-ZBTB26-201.alignment counts-znf_b1h_alignment/ZBTB26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB26-201/pos_patterns.ENCSR184SVO_ChIP_ZBTB26_HepG2_ENCSR326ECX_counts_pattern_4.n_622-vs-ZBTB26-201.alignment counts-znf_b1h_alignment/ZBTB26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB26-201/pos_patterns.ENCSR184SVO_ChIP_ZBTB26_HepG2_ENCSR326ECX_counts_pattern_5.n_509-vs-ZBTB26-201.alignment counts-znf_b1h_alignment/ZBTB26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB26-201/pos_patterns.ENCSR184SVO_ChIP_ZBTB26_HepG2_ENCSR326ECX_counts_pattern_6.n_443-vs-ZBTB26-201.alignment counts-znf_b1h_alignment/ZBTB26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB26-201/pos_patterns.ENCSR184SVO_ChIP_ZBTB26_HepG2_ENCSR326ECX_counts_pattern_7.n_341-vs-ZBTB26-201.alignment counts-znf_b1h_alignment/ZBTB26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB26-201/pos_patterns.ENCSR184SVO_ChIP_ZBTB26_HepG2_ENCSR326ECX_counts_pattern_8.n_241-vs-ZBTB26-201.alignment counts-znf_b1h_alignment/ZBTB26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB26-201/pos_patterns.ENCSR184SVO_ChIP_ZBTB26_HepG2_ENCSR326ECX_counts_pattern_9.n_176-vs-ZBTB26-201.alignment counts-znf_b1h_alignment/ZBTB26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB26-201/pos_patterns.ENCSR229DYF_ChIP_ZBTB26_HEK293_ENCSR734DPC_counts_pattern_0.n_26678-vs-ZBTB26-201.alignment counts-znf_b1h_alignment/ZBTB26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB26-201/pos_patterns.ENCSR229DYF_ChIP_ZBTB26_HEK293_ENCSR734DPC_counts_pattern_1.n_277-vs-ZBTB26-201.alignment counts-znf_b1h_alignment/ZBTB26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB26-201/pos_patterns.ENCSR229DYF_ChIP_ZBTB26_HEK293_ENCSR734DPC_counts_pattern_2.n_204-vs-ZBTB26-201.alignment counts-znf_b1h_alignment/ZBTB26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB26-201/pos_patterns.ENCSR229DYF_ChIP_ZBTB26_HEK293_ENCSR734DPC_counts_pattern_3.n_129-vs-ZBTB26-201.alignment counts-znf_b1h_alignment/ZBTB26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB26-201/pos_patterns.ENCSR229DYF_ChIP_ZBTB26_HEK293_ENCSR734DPC_counts_pattern_4.n_71-vs-ZBTB26-201.alignment counts-znf_b1h_alignment/ZBTB26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB26-201/pos_patterns.ENCSR229DYF_ChIP_ZBTB26_HEK293_ENCSR734DPC_counts_pattern_5.n_55-vs-ZBTB26-201.alignment counts-znf_b1h_alignment/ZBTB26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB26-201/pos_patterns.ENCSR229DYF_ChIP_ZBTB26_HEK293_ENCSR734DPC_counts_pattern_6.n_29-vs-ZBTB26-201.alignment counts-znf_b1h_alignment/ZBTB26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB3-201/pos_patterns.ENCSR481AIK_ChIP_ZBTB3_HepG2_ENCSR171EVX_counts_pattern_0.n_1431-vs-ZBTB3-201.alignment counts-znf_b1h_alignment/ZBTB3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB3-201/pos_patterns.ENCSR481AIK_ChIP_ZBTB3_HepG2_ENCSR171EVX_counts_pattern_10.n_139-vs-ZBTB3-201.alignment counts-znf_b1h_alignment/ZBTB3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB3-201/pos_patterns.ENCSR481AIK_ChIP_ZBTB3_HepG2_ENCSR171EVX_counts_pattern_11.n_93-vs-ZBTB3-201.alignment counts-znf_b1h_alignment/ZBTB3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB3-201/pos_patterns.ENCSR481AIK_ChIP_ZBTB3_HepG2_ENCSR171EVX_counts_pattern_12.n_92-vs-ZBTB3-201.alignment counts-znf_b1h_alignment/ZBTB3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB3-201/pos_patterns.ENCSR481AIK_ChIP_ZBTB3_HepG2_ENCSR171EVX_counts_pattern_13.n_74-vs-ZBTB3-201.alignment counts-znf_b1h_alignment/ZBTB3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB3-201/pos_patterns.ENCSR481AIK_ChIP_ZBTB3_HepG2_ENCSR171EVX_counts_pattern_14.n_60-vs-ZBTB3-201.alignment counts-znf_b1h_alignment/ZBTB3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB3-201/pos_patterns.ENCSR481AIK_ChIP_ZBTB3_HepG2_ENCSR171EVX_counts_pattern_15.n_30-vs-ZBTB3-201.alignment counts-znf_b1h_alignment/ZBTB3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB3-201/pos_patterns.ENCSR481AIK_ChIP_ZBTB3_HepG2_ENCSR171EVX_counts_pattern_16.n_21-vs-ZBTB3-201.alignment counts-znf_b1h_alignment/ZBTB3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB3-201/pos_patterns.ENCSR481AIK_ChIP_ZBTB3_HepG2_ENCSR171EVX_counts_pattern_1.n_1068-vs-ZBTB3-201.alignment counts-znf_b1h_alignment/ZBTB3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB3-201/pos_patterns.ENCSR481AIK_ChIP_ZBTB3_HepG2_ENCSR171EVX_counts_pattern_2.n_1046-vs-ZBTB3-201.alignment counts-znf_b1h_alignment/ZBTB3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB3-201/pos_patterns.ENCSR481AIK_ChIP_ZBTB3_HepG2_ENCSR171EVX_counts_pattern_3.n_437-vs-ZBTB3-201.alignment counts-znf_b1h_alignment/ZBTB3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB3-201/pos_patterns.ENCSR481AIK_ChIP_ZBTB3_HepG2_ENCSR171EVX_counts_pattern_4.n_413-vs-ZBTB3-201.alignment counts-znf_b1h_alignment/ZBTB3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB3-201/pos_patterns.ENCSR481AIK_ChIP_ZBTB3_HepG2_ENCSR171EVX_counts_pattern_5.n_304-vs-ZBTB3-201.alignment counts-znf_b1h_alignment/ZBTB3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB3-201/pos_patterns.ENCSR481AIK_ChIP_ZBTB3_HepG2_ENCSR171EVX_counts_pattern_6.n_247-vs-ZBTB3-201.alignment counts-znf_b1h_alignment/ZBTB3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB3-201/pos_patterns.ENCSR481AIK_ChIP_ZBTB3_HepG2_ENCSR171EVX_counts_pattern_7.n_243-vs-ZBTB3-201.alignment counts-znf_b1h_alignment/ZBTB3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB3-201/pos_patterns.ENCSR481AIK_ChIP_ZBTB3_HepG2_ENCSR171EVX_counts_pattern_8.n_168-vs-ZBTB3-201.alignment counts-znf_b1h_alignment/ZBTB3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB3-201/pos_patterns.ENCSR481AIK_ChIP_ZBTB3_HepG2_ENCSR171EVX_counts_pattern_9.n_160-vs-ZBTB3-201.alignment counts-znf_b1h_alignment/ZBTB3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/neg_patterns.ENCSR421DAO_ChIP_ZBTB33_HepG2_ENCSR169EGG_counts_pattern_0.n_48-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/neg_patterns.ENCSR421DAO_ChIP_ZBTB33_HepG2_ENCSR169EGG_counts_pattern_1.n_40-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/neg_patterns.ENCSR421DAO_ChIP_ZBTB33_HepG2_ENCSR169EGG_counts_pattern_2.n_29-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/neg_patterns.ENCSR421DAO_ChIP_ZBTB33_HepG2_ENCSR169EGG_counts_pattern_3.n_26-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/neg_patterns.ENCSR421DAO_ChIP_ZBTB33_HepG2_ENCSR169EGG_counts_pattern_4.n_20-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BHC_ChIP_ZBTB33_GM12878_ENCSR996JFB_counts_pattern_0.n_1324-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BHC_ChIP_ZBTB33_GM12878_ENCSR996JFB_counts_pattern_1.n_253-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BHC_ChIP_ZBTB33_GM12878_ENCSR996JFB_counts_pattern_2.n_24-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BHR_ChIP_ZBTB33_HepG2_ENCSR936MXU_counts_pattern_0.n_1133-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BHR_ChIP_ZBTB33_HepG2_ENCSR936MXU_counts_pattern_1.n_43-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BHR_ChIP_ZBTB33_HepG2_ENCSR936MXU_counts_pattern_2.n_40-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BKF_ChIP_ZBTB33_K562_ENCSR933IYO_counts_pattern_0.n_2125-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BKF_ChIP_ZBTB33_K562_ENCSR933IYO_counts_pattern_1.n_74-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BKF_ChIP_ZBTB33_K562_ENCSR933IYO_counts_pattern_2.n_39-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BKF_ChIP_ZBTB33_K562_ENCSR933IYO_counts_pattern_3.n_22-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BNA_ChIP_ZBTB33_HepG2_ENCSR045NYB_counts_pattern_0.n_1623-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BNA_ChIP_ZBTB33_HepG2_ENCSR045NYB_counts_pattern_1.n_70-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BNA_ChIP_ZBTB33_HepG2_ENCSR045NYB_counts_pattern_2.n_29-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BNY_ChIP_ZBTB33_HCT116_ENCSR232OWT_counts_pattern_0.n_1785-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BNY_ChIP_ZBTB33_HCT116_ENCSR232OWT_counts_pattern_1.n_1784-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BPZ_ChIP_ZBTB33_A549_ENCSR783JAW_counts_pattern_0.n_2577-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BPZ_ChIP_ZBTB33_A549_ENCSR783JAW_counts_pattern_10.n_91-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BPZ_ChIP_ZBTB33_A549_ENCSR783JAW_counts_pattern_11.n_80-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BPZ_ChIP_ZBTB33_A549_ENCSR783JAW_counts_pattern_12.n_23-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BPZ_ChIP_ZBTB33_A549_ENCSR783JAW_counts_pattern_1.n_1965-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BPZ_ChIP_ZBTB33_A549_ENCSR783JAW_counts_pattern_2.n_550-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BPZ_ChIP_ZBTB33_A549_ENCSR783JAW_counts_pattern_3.n_247-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BPZ_ChIP_ZBTB33_A549_ENCSR783JAW_counts_pattern_4.n_221-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BPZ_ChIP_ZBTB33_A549_ENCSR783JAW_counts_pattern_5.n_167-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BPZ_ChIP_ZBTB33_A549_ENCSR783JAW_counts_pattern_6.n_129-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BPZ_ChIP_ZBTB33_A549_ENCSR783JAW_counts_pattern_7.n_115-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BPZ_ChIP_ZBTB33_A549_ENCSR783JAW_counts_pattern_8.n_114-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BPZ_ChIP_ZBTB33_A549_ENCSR783JAW_counts_pattern_9.n_104-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BTS_ChIP_ZBTB33_SK-N-SH_ENCSR546ZGT_counts_pattern_0.n_4063-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BTS_ChIP_ZBTB33_SK-N-SH_ENCSR546ZGT_counts_pattern_1.n_2233-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BTS_ChIP_ZBTB33_SK-N-SH_ENCSR546ZGT_counts_pattern_2.n_241-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BTS_ChIP_ZBTB33_SK-N-SH_ENCSR546ZGT_counts_pattern_3.n_196-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BTS_ChIP_ZBTB33_SK-N-SH_ENCSR546ZGT_counts_pattern_4.n_130-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BTS_ChIP_ZBTB33_SK-N-SH_ENCSR546ZGT_counts_pattern_5.n_78-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BTS_ChIP_ZBTB33_SK-N-SH_ENCSR546ZGT_counts_pattern_6.n_36-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BTS_ChIP_ZBTB33_SK-N-SH_ENCSR546ZGT_counts_pattern_7.n_22-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BTS_ChIP_ZBTB33_SK-N-SH_ENCSR546ZGT_counts_pattern_8.n_22-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR231YFE_ChIP_ZBTB33_MCF-7_ENCSR578HAP_counts_pattern_0.n_7363-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR231YFE_ChIP_ZBTB33_MCF-7_ENCSR578HAP_counts_pattern_1.n_844-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR231YFE_ChIP_ZBTB33_MCF-7_ENCSR578HAP_counts_pattern_2.n_444-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR231YFE_ChIP_ZBTB33_MCF-7_ENCSR578HAP_counts_pattern_3.n_294-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR231YFE_ChIP_ZBTB33_MCF-7_ENCSR578HAP_counts_pattern_4.n_185-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR231YFE_ChIP_ZBTB33_MCF-7_ENCSR578HAP_counts_pattern_5.n_166-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR231YFE_ChIP_ZBTB33_MCF-7_ENCSR578HAP_counts_pattern_6.n_84-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR231YFE_ChIP_ZBTB33_MCF-7_ENCSR578HAP_counts_pattern_7.n_44-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR345YWJ_ChIP_ZBTB33_liver_ENCSR900SAH_counts_pattern_0.n_2058-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR345YWJ_ChIP_ZBTB33_liver_ENCSR900SAH_counts_pattern_1.n_82-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR421DAO_ChIP_ZBTB33_HepG2_ENCSR169EGG_counts_pattern_0.n_16453-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR421DAO_ChIP_ZBTB33_HepG2_ENCSR169EGG_counts_pattern_10.n_522-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR421DAO_ChIP_ZBTB33_HepG2_ENCSR169EGG_counts_pattern_11.n_473-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR421DAO_ChIP_ZBTB33_HepG2_ENCSR169EGG_counts_pattern_12.n_428-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR421DAO_ChIP_ZBTB33_HepG2_ENCSR169EGG_counts_pattern_13.n_366-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR421DAO_ChIP_ZBTB33_HepG2_ENCSR169EGG_counts_pattern_14.n_337-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR421DAO_ChIP_ZBTB33_HepG2_ENCSR169EGG_counts_pattern_15.n_267-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR421DAO_ChIP_ZBTB33_HepG2_ENCSR169EGG_counts_pattern_16.n_222-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR421DAO_ChIP_ZBTB33_HepG2_ENCSR169EGG_counts_pattern_17.n_211-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR421DAO_ChIP_ZBTB33_HepG2_ENCSR169EGG_counts_pattern_18.n_182-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR421DAO_ChIP_ZBTB33_HepG2_ENCSR169EGG_counts_pattern_19.n_168-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR421DAO_ChIP_ZBTB33_HepG2_ENCSR169EGG_counts_pattern_1.n_3676-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR421DAO_ChIP_ZBTB33_HepG2_ENCSR169EGG_counts_pattern_20.n_162-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR421DAO_ChIP_ZBTB33_HepG2_ENCSR169EGG_counts_pattern_21.n_156-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR421DAO_ChIP_ZBTB33_HepG2_ENCSR169EGG_counts_pattern_22.n_104-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR421DAO_ChIP_ZBTB33_HepG2_ENCSR169EGG_counts_pattern_23.n_100-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR421DAO_ChIP_ZBTB33_HepG2_ENCSR169EGG_counts_pattern_24.n_99-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR421DAO_ChIP_ZBTB33_HepG2_ENCSR169EGG_counts_pattern_25.n_94-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR421DAO_ChIP_ZBTB33_HepG2_ENCSR169EGG_counts_pattern_26.n_75-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR421DAO_ChIP_ZBTB33_HepG2_ENCSR169EGG_counts_pattern_27.n_73-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR421DAO_ChIP_ZBTB33_HepG2_ENCSR169EGG_counts_pattern_28.n_27-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR421DAO_ChIP_ZBTB33_HepG2_ENCSR169EGG_counts_pattern_29.n_22-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR421DAO_ChIP_ZBTB33_HepG2_ENCSR169EGG_counts_pattern_2.n_1957-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR421DAO_ChIP_ZBTB33_HepG2_ENCSR169EGG_counts_pattern_3.n_1605-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR421DAO_ChIP_ZBTB33_HepG2_ENCSR169EGG_counts_pattern_4.n_1344-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR421DAO_ChIP_ZBTB33_HepG2_ENCSR169EGG_counts_pattern_5.n_1334-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR421DAO_ChIP_ZBTB33_HepG2_ENCSR169EGG_counts_pattern_6.n_1029-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR421DAO_ChIP_ZBTB33_HepG2_ENCSR169EGG_counts_pattern_7.n_889-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR421DAO_ChIP_ZBTB33_HepG2_ENCSR169EGG_counts_pattern_8.n_790-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR421DAO_ChIP_ZBTB33_HepG2_ENCSR169EGG_counts_pattern_9.n_554-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR516HUP_ChIP_ZBTB33_liver_ENCSR700BQI_counts_pattern_0.n_5157-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR516HUP_ChIP_ZBTB33_liver_ENCSR700BQI_counts_pattern_10.n_32-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR516HUP_ChIP_ZBTB33_liver_ENCSR700BQI_counts_pattern_11.n_31-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR516HUP_ChIP_ZBTB33_liver_ENCSR700BQI_counts_pattern_12.n_28-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR516HUP_ChIP_ZBTB33_liver_ENCSR700BQI_counts_pattern_1.n_4771-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR516HUP_ChIP_ZBTB33_liver_ENCSR700BQI_counts_pattern_2.n_1976-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR516HUP_ChIP_ZBTB33_liver_ENCSR700BQI_counts_pattern_3.n_1247-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR516HUP_ChIP_ZBTB33_liver_ENCSR700BQI_counts_pattern_4.n_938-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR516HUP_ChIP_ZBTB33_liver_ENCSR700BQI_counts_pattern_5.n_629-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR516HUP_ChIP_ZBTB33_liver_ENCSR700BQI_counts_pattern_6.n_438-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR516HUP_ChIP_ZBTB33_liver_ENCSR700BQI_counts_pattern_7.n_67-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR516HUP_ChIP_ZBTB33_liver_ENCSR700BQI_counts_pattern_8.n_49-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR516HUP_ChIP_ZBTB33_liver_ENCSR700BQI_counts_pattern_9.n_45-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR542FLV_ChIP_ZBTB33_GM12878_ENCSR272SPY_counts_pattern_0.n_6016-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR542FLV_ChIP_ZBTB33_GM12878_ENCSR272SPY_counts_pattern_10.n_40-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR542FLV_ChIP_ZBTB33_GM12878_ENCSR272SPY_counts_pattern_11.n_36-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR542FLV_ChIP_ZBTB33_GM12878_ENCSR272SPY_counts_pattern_1.n_886-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR542FLV_ChIP_ZBTB33_GM12878_ENCSR272SPY_counts_pattern_2.n_329-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR542FLV_ChIP_ZBTB33_GM12878_ENCSR272SPY_counts_pattern_3.n_295-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR542FLV_ChIP_ZBTB33_GM12878_ENCSR272SPY_counts_pattern_4.n_233-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR542FLV_ChIP_ZBTB33_GM12878_ENCSR272SPY_counts_pattern_5.n_219-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR542FLV_ChIP_ZBTB33_GM12878_ENCSR272SPY_counts_pattern_6.n_217-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR542FLV_ChIP_ZBTB33_GM12878_ENCSR272SPY_counts_pattern_7.n_186-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR542FLV_ChIP_ZBTB33_GM12878_ENCSR272SPY_counts_pattern_8.n_168-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR542FLV_ChIP_ZBTB33_GM12878_ENCSR272SPY_counts_pattern_9.n_124-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR876GXA_ChIP_ZBTB33_K562_ENCSR407NNG_counts_pattern_0.n_20641-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR876GXA_ChIP_ZBTB33_K562_ENCSR407NNG_counts_pattern_10.n_426-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR876GXA_ChIP_ZBTB33_K562_ENCSR407NNG_counts_pattern_11.n_252-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR876GXA_ChIP_ZBTB33_K562_ENCSR407NNG_counts_pattern_12.n_79-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR876GXA_ChIP_ZBTB33_K562_ENCSR407NNG_counts_pattern_13.n_73-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR876GXA_ChIP_ZBTB33_K562_ENCSR407NNG_counts_pattern_14.n_58-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR876GXA_ChIP_ZBTB33_K562_ENCSR407NNG_counts_pattern_15.n_46-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR876GXA_ChIP_ZBTB33_K562_ENCSR407NNG_counts_pattern_16.n_46-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR876GXA_ChIP_ZBTB33_K562_ENCSR407NNG_counts_pattern_17.n_45-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR876GXA_ChIP_ZBTB33_K562_ENCSR407NNG_counts_pattern_18.n_44-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR876GXA_ChIP_ZBTB33_K562_ENCSR407NNG_counts_pattern_19.n_35-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR876GXA_ChIP_ZBTB33_K562_ENCSR407NNG_counts_pattern_1.n_1626-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR876GXA_ChIP_ZBTB33_K562_ENCSR407NNG_counts_pattern_20.n_30-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR876GXA_ChIP_ZBTB33_K562_ENCSR407NNG_counts_pattern_21.n_30-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR876GXA_ChIP_ZBTB33_K562_ENCSR407NNG_counts_pattern_22.n_23-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR876GXA_ChIP_ZBTB33_K562_ENCSR407NNG_counts_pattern_23.n_21-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR876GXA_ChIP_ZBTB33_K562_ENCSR407NNG_counts_pattern_2.n_1500-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR876GXA_ChIP_ZBTB33_K562_ENCSR407NNG_counts_pattern_3.n_1199-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR876GXA_ChIP_ZBTB33_K562_ENCSR407NNG_counts_pattern_4.n_1162-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR876GXA_ChIP_ZBTB33_K562_ENCSR407NNG_counts_pattern_5.n_1060-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR876GXA_ChIP_ZBTB33_K562_ENCSR407NNG_counts_pattern_6.n_758-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR876GXA_ChIP_ZBTB33_K562_ENCSR407NNG_counts_pattern_7.n_747-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR876GXA_ChIP_ZBTB33_K562_ENCSR407NNG_counts_pattern_8.n_689-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR876GXA_ChIP_ZBTB33_K562_ENCSR407NNG_counts_pattern_9.n_597-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR943MQH_ChIP_ZBTB33_WTC11_ENCSR575OXS_counts_pattern_0.n_813-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR943MQH_ChIP_ZBTB33_WTC11_ENCSR575OXS_counts_pattern_10.n_61-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR943MQH_ChIP_ZBTB33_WTC11_ENCSR575OXS_counts_pattern_1.n_800-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR943MQH_ChIP_ZBTB33_WTC11_ENCSR575OXS_counts_pattern_2.n_624-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR943MQH_ChIP_ZBTB33_WTC11_ENCSR575OXS_counts_pattern_3.n_470-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR943MQH_ChIP_ZBTB33_WTC11_ENCSR575OXS_counts_pattern_4.n_469-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR943MQH_ChIP_ZBTB33_WTC11_ENCSR575OXS_counts_pattern_5.n_249-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR943MQH_ChIP_ZBTB33_WTC11_ENCSR575OXS_counts_pattern_6.n_227-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR943MQH_ChIP_ZBTB33_WTC11_ENCSR575OXS_counts_pattern_7.n_137-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR943MQH_ChIP_ZBTB33_WTC11_ENCSR575OXS_counts_pattern_8.n_135-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR943MQH_ChIP_ZBTB33_WTC11_ENCSR575OXS_counts_pattern_9.n_101-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR955LXM_ChIP_ZBTB33_K562_ENCSR886GAY_counts_pattern_0.n_16991-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR955LXM_ChIP_ZBTB33_K562_ENCSR886GAY_counts_pattern_10.n_536-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR955LXM_ChIP_ZBTB33_K562_ENCSR886GAY_counts_pattern_11.n_352-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR955LXM_ChIP_ZBTB33_K562_ENCSR886GAY_counts_pattern_12.n_289-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR955LXM_ChIP_ZBTB33_K562_ENCSR886GAY_counts_pattern_13.n_216-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR955LXM_ChIP_ZBTB33_K562_ENCSR886GAY_counts_pattern_14.n_203-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR955LXM_ChIP_ZBTB33_K562_ENCSR886GAY_counts_pattern_15.n_195-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR955LXM_ChIP_ZBTB33_K562_ENCSR886GAY_counts_pattern_16.n_163-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR955LXM_ChIP_ZBTB33_K562_ENCSR886GAY_counts_pattern_17.n_125-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR955LXM_ChIP_ZBTB33_K562_ENCSR886GAY_counts_pattern_18.n_123-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR955LXM_ChIP_ZBTB33_K562_ENCSR886GAY_counts_pattern_19.n_105-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR955LXM_ChIP_ZBTB33_K562_ENCSR886GAY_counts_pattern_1.n_1962-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR955LXM_ChIP_ZBTB33_K562_ENCSR886GAY_counts_pattern_20.n_60-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR955LXM_ChIP_ZBTB33_K562_ENCSR886GAY_counts_pattern_21.n_59-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR955LXM_ChIP_ZBTB33_K562_ENCSR886GAY_counts_pattern_22.n_52-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR955LXM_ChIP_ZBTB33_K562_ENCSR886GAY_counts_pattern_23.n_44-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR955LXM_ChIP_ZBTB33_K562_ENCSR886GAY_counts_pattern_24.n_40-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR955LXM_ChIP_ZBTB33_K562_ENCSR886GAY_counts_pattern_25.n_38-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR955LXM_ChIP_ZBTB33_K562_ENCSR886GAY_counts_pattern_26.n_35-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR955LXM_ChIP_ZBTB33_K562_ENCSR886GAY_counts_pattern_27.n_34-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR955LXM_ChIP_ZBTB33_K562_ENCSR886GAY_counts_pattern_28.n_26-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR955LXM_ChIP_ZBTB33_K562_ENCSR886GAY_counts_pattern_29.n_22-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR955LXM_ChIP_ZBTB33_K562_ENCSR886GAY_counts_pattern_2.n_1959-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR955LXM_ChIP_ZBTB33_K562_ENCSR886GAY_counts_pattern_3.n_1809-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR955LXM_ChIP_ZBTB33_K562_ENCSR886GAY_counts_pattern_4.n_1290-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR955LXM_ChIP_ZBTB33_K562_ENCSR886GAY_counts_pattern_5.n_1130-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR955LXM_ChIP_ZBTB33_K562_ENCSR886GAY_counts_pattern_6.n_953-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR955LXM_ChIP_ZBTB33_K562_ENCSR886GAY_counts_pattern_7.n_859-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR955LXM_ChIP_ZBTB33_K562_ENCSR886GAY_counts_pattern_8.n_553-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR955LXM_ChIP_ZBTB33_K562_ENCSR886GAY_counts_pattern_9.n_537-vs-ZBTB33-201.alignment counts-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB37-201/pos_patterns.ENCSR775YXE_ChIP_ZBTB37_HepG2_ENCSR002PIA_counts_pattern_0.n_1104-vs-ZBTB37-201.alignment counts-znf_b1h_alignment/ZBTB37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB37-201/pos_patterns.ENCSR775YXE_ChIP_ZBTB37_HepG2_ENCSR002PIA_counts_pattern_1.n_1071-vs-ZBTB37-201.alignment counts-znf_b1h_alignment/ZBTB37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB37-201/pos_patterns.ENCSR775YXE_ChIP_ZBTB37_HepG2_ENCSR002PIA_counts_pattern_2.n_978-vs-ZBTB37-201.alignment counts-znf_b1h_alignment/ZBTB37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB37-201/pos_patterns.ENCSR775YXE_ChIP_ZBTB37_HepG2_ENCSR002PIA_counts_pattern_3.n_962-vs-ZBTB37-201.alignment counts-znf_b1h_alignment/ZBTB37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB37-201/pos_patterns.ENCSR775YXE_ChIP_ZBTB37_HepG2_ENCSR002PIA_counts_pattern_4.n_643-vs-ZBTB37-201.alignment counts-znf_b1h_alignment/ZBTB37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB37-201/pos_patterns.ENCSR775YXE_ChIP_ZBTB37_HepG2_ENCSR002PIA_counts_pattern_5.n_479-vs-ZBTB37-201.alignment counts-znf_b1h_alignment/ZBTB37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB37-201/pos_patterns.ENCSR775YXE_ChIP_ZBTB37_HepG2_ENCSR002PIA_counts_pattern_6.n_226-vs-ZBTB37-201.alignment counts-znf_b1h_alignment/ZBTB37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB37-201/pos_patterns.ENCSR775YXE_ChIP_ZBTB37_HepG2_ENCSR002PIA_counts_pattern_7.n_208-vs-ZBTB37-201.alignment counts-znf_b1h_alignment/ZBTB37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB37-201/pos_patterns.ENCSR775YXE_ChIP_ZBTB37_HepG2_ENCSR002PIA_counts_pattern_8.n_55-vs-ZBTB37-201.alignment counts-znf_b1h_alignment/ZBTB37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB37-201/pos_patterns.ENCSR775YXE_ChIP_ZBTB37_HepG2_ENCSR002PIA_counts_pattern_9.n_32-vs-ZBTB37-201.alignment counts-znf_b1h_alignment/ZBTB37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB39-201/pos_patterns.ENCSR087NSZ_ChIP_ZBTB39_HepG2_ENCSR117FOJ_counts_pattern_0.n_1666-vs-ZBTB39-201.alignment counts-znf_b1h_alignment/ZBTB39-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB39-201/pos_patterns.ENCSR087NSZ_ChIP_ZBTB39_HepG2_ENCSR117FOJ_counts_pattern_1.n_1313-vs-ZBTB39-201.alignment counts-znf_b1h_alignment/ZBTB39-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB39-201/pos_patterns.ENCSR087NSZ_ChIP_ZBTB39_HepG2_ENCSR117FOJ_counts_pattern_2.n_1172-vs-ZBTB39-201.alignment counts-znf_b1h_alignment/ZBTB39-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB39-201/pos_patterns.ENCSR087NSZ_ChIP_ZBTB39_HepG2_ENCSR117FOJ_counts_pattern_3.n_804-vs-ZBTB39-201.alignment counts-znf_b1h_alignment/ZBTB39-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB39-201/pos_patterns.ENCSR087NSZ_ChIP_ZBTB39_HepG2_ENCSR117FOJ_counts_pattern_4.n_494-vs-ZBTB39-201.alignment counts-znf_b1h_alignment/ZBTB39-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB39-201/pos_patterns.ENCSR087NSZ_ChIP_ZBTB39_HepG2_ENCSR117FOJ_counts_pattern_5.n_351-vs-ZBTB39-201.alignment counts-znf_b1h_alignment/ZBTB39-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB39-201/pos_patterns.ENCSR087NSZ_ChIP_ZBTB39_HepG2_ENCSR117FOJ_counts_pattern_6.n_28-vs-ZBTB39-201.alignment counts-znf_b1h_alignment/ZBTB39-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB39-201/pos_patterns.ENCSR087NSZ_ChIP_ZBTB39_HepG2_ENCSR117FOJ_counts_pattern_7.n_28-vs-ZBTB39-201.alignment counts-znf_b1h_alignment/ZBTB39-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR158RYZ_ChIP_ZBTB40_K562_ENCSR512YWH_counts_pattern_0.n_1367-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR158RYZ_ChIP_ZBTB40_K562_ENCSR512YWH_counts_pattern_10.n_44-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR158RYZ_ChIP_ZBTB40_K562_ENCSR512YWH_counts_pattern_11.n_41-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR158RYZ_ChIP_ZBTB40_K562_ENCSR512YWH_counts_pattern_12.n_33-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR158RYZ_ChIP_ZBTB40_K562_ENCSR512YWH_counts_pattern_1.n_252-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR158RYZ_ChIP_ZBTB40_K562_ENCSR512YWH_counts_pattern_2.n_175-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR158RYZ_ChIP_ZBTB40_K562_ENCSR512YWH_counts_pattern_3.n_172-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR158RYZ_ChIP_ZBTB40_K562_ENCSR512YWH_counts_pattern_4.n_117-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR158RYZ_ChIP_ZBTB40_K562_ENCSR512YWH_counts_pattern_5.n_76-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR158RYZ_ChIP_ZBTB40_K562_ENCSR512YWH_counts_pattern_6.n_69-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR158RYZ_ChIP_ZBTB40_K562_ENCSR512YWH_counts_pattern_7.n_65-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR158RYZ_ChIP_ZBTB40_K562_ENCSR512YWH_counts_pattern_8.n_53-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR158RYZ_ChIP_ZBTB40_K562_ENCSR512YWH_counts_pattern_9.n_49-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_counts_pattern_0.n_314-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_counts_pattern_10.n_36-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_counts_pattern_11.n_29-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_counts_pattern_12.n_29-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_counts_pattern_13.n_27-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_counts_pattern_1.n_85-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_counts_pattern_2.n_82-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_counts_pattern_3.n_79-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_counts_pattern_4.n_76-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_counts_pattern_5.n_75-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_counts_pattern_6.n_69-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_counts_pattern_7.n_48-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_counts_pattern_8.n_41-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_counts_pattern_9.n_37-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR237VLT_ChIP_ZBTB40_K562_ENCSR087JVK_counts_pattern_0.n_337-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR237VLT_ChIP_ZBTB40_K562_ENCSR087JVK_counts_pattern_1.n_164-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR237VLT_ChIP_ZBTB40_K562_ENCSR087JVK_counts_pattern_2.n_55-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR237VLT_ChIP_ZBTB40_K562_ENCSR087JVK_counts_pattern_3.n_21-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR318LVG_ChIP_ZBTB40_MCF-7_ENCSR580KUK_counts_pattern_0.n_40-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR318LVG_ChIP_ZBTB40_MCF-7_ENCSR580KUK_counts_pattern_1.n_36-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR318LVG_ChIP_ZBTB40_MCF-7_ENCSR580KUK_counts_pattern_2.n_27-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR579YNY_ChIP_ZBTB40_K562_ENCSR629SAH_counts_pattern_0.n_224-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR579YNY_ChIP_ZBTB40_K562_ENCSR629SAH_counts_pattern_1.n_141-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR579YNY_ChIP_ZBTB40_K562_ENCSR629SAH_counts_pattern_2.n_110-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR579YNY_ChIP_ZBTB40_K562_ENCSR629SAH_counts_pattern_3.n_110-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR579YNY_ChIP_ZBTB40_K562_ENCSR629SAH_counts_pattern_4.n_74-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR579YNY_ChIP_ZBTB40_K562_ENCSR629SAH_counts_pattern_5.n_66-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR579YNY_ChIP_ZBTB40_K562_ENCSR629SAH_counts_pattern_6.n_62-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR579YNY_ChIP_ZBTB40_K562_ENCSR629SAH_counts_pattern_7.n_56-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR579YNY_ChIP_ZBTB40_K562_ENCSR629SAH_counts_pattern_8.n_39-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR579YNY_ChIP_ZBTB40_K562_ENCSR629SAH_counts_pattern_9.n_34-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR158RYZ_ChIP_ZBTB40_K562_ENCSR512YWH_counts_pattern_0.n_4682-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR158RYZ_ChIP_ZBTB40_K562_ENCSR512YWH_counts_pattern_10.n_112-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR158RYZ_ChIP_ZBTB40_K562_ENCSR512YWH_counts_pattern_11.n_96-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR158RYZ_ChIP_ZBTB40_K562_ENCSR512YWH_counts_pattern_12.n_65-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR158RYZ_ChIP_ZBTB40_K562_ENCSR512YWH_counts_pattern_13.n_44-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR158RYZ_ChIP_ZBTB40_K562_ENCSR512YWH_counts_pattern_14.n_43-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR158RYZ_ChIP_ZBTB40_K562_ENCSR512YWH_counts_pattern_15.n_42-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR158RYZ_ChIP_ZBTB40_K562_ENCSR512YWH_counts_pattern_16.n_30-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR158RYZ_ChIP_ZBTB40_K562_ENCSR512YWH_counts_pattern_1.n_4457-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR158RYZ_ChIP_ZBTB40_K562_ENCSR512YWH_counts_pattern_2.n_2190-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR158RYZ_ChIP_ZBTB40_K562_ENCSR512YWH_counts_pattern_3.n_1723-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR158RYZ_ChIP_ZBTB40_K562_ENCSR512YWH_counts_pattern_4.n_918-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR158RYZ_ChIP_ZBTB40_K562_ENCSR512YWH_counts_pattern_5.n_438-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR158RYZ_ChIP_ZBTB40_K562_ENCSR512YWH_counts_pattern_6.n_309-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR158RYZ_ChIP_ZBTB40_K562_ENCSR512YWH_counts_pattern_7.n_213-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR158RYZ_ChIP_ZBTB40_K562_ENCSR512YWH_counts_pattern_8.n_143-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR158RYZ_ChIP_ZBTB40_K562_ENCSR512YWH_counts_pattern_9.n_123-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR189YYK_ChIP_ZBTB40_GM12878_ENCSR823DBW_counts_pattern_0.n_10725-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR189YYK_ChIP_ZBTB40_GM12878_ENCSR823DBW_counts_pattern_10.n_130-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR189YYK_ChIP_ZBTB40_GM12878_ENCSR823DBW_counts_pattern_11.n_76-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR189YYK_ChIP_ZBTB40_GM12878_ENCSR823DBW_counts_pattern_12.n_58-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR189YYK_ChIP_ZBTB40_GM12878_ENCSR823DBW_counts_pattern_13.n_50-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR189YYK_ChIP_ZBTB40_GM12878_ENCSR823DBW_counts_pattern_14.n_24-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR189YYK_ChIP_ZBTB40_GM12878_ENCSR823DBW_counts_pattern_15.n_20-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR189YYK_ChIP_ZBTB40_GM12878_ENCSR823DBW_counts_pattern_1.n_4905-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR189YYK_ChIP_ZBTB40_GM12878_ENCSR823DBW_counts_pattern_2.n_728-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR189YYK_ChIP_ZBTB40_GM12878_ENCSR823DBW_counts_pattern_3.n_474-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR189YYK_ChIP_ZBTB40_GM12878_ENCSR823DBW_counts_pattern_4.n_382-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR189YYK_ChIP_ZBTB40_GM12878_ENCSR823DBW_counts_pattern_5.n_269-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR189YYK_ChIP_ZBTB40_GM12878_ENCSR823DBW_counts_pattern_6.n_250-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR189YYK_ChIP_ZBTB40_GM12878_ENCSR823DBW_counts_pattern_7.n_242-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR189YYK_ChIP_ZBTB40_GM12878_ENCSR823DBW_counts_pattern_8.n_230-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR189YYK_ChIP_ZBTB40_GM12878_ENCSR823DBW_counts_pattern_9.n_222-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_counts_pattern_0.n_2432-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_counts_pattern_10.n_181-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_counts_pattern_11.n_168-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_counts_pattern_12.n_145-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_counts_pattern_13.n_137-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_counts_pattern_14.n_131-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_counts_pattern_15.n_120-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_counts_pattern_16.n_80-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_counts_pattern_17.n_43-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_counts_pattern_18.n_36-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_counts_pattern_19.n_20-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_counts_pattern_1.n_1981-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_counts_pattern_2.n_994-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_counts_pattern_3.n_937-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_counts_pattern_4.n_778-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_counts_pattern_5.n_696-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_counts_pattern_6.n_299-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_counts_pattern_7.n_291-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_counts_pattern_8.n_281-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_counts_pattern_9.n_236-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR237VLT_ChIP_ZBTB40_K562_ENCSR087JVK_counts_pattern_0.n_11477-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR237VLT_ChIP_ZBTB40_K562_ENCSR087JVK_counts_pattern_10.n_24-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR237VLT_ChIP_ZBTB40_K562_ENCSR087JVK_counts_pattern_1.n_4848-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR237VLT_ChIP_ZBTB40_K562_ENCSR087JVK_counts_pattern_2.n_3041-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR237VLT_ChIP_ZBTB40_K562_ENCSR087JVK_counts_pattern_3.n_871-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR237VLT_ChIP_ZBTB40_K562_ENCSR087JVK_counts_pattern_4.n_549-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR237VLT_ChIP_ZBTB40_K562_ENCSR087JVK_counts_pattern_5.n_528-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR237VLT_ChIP_ZBTB40_K562_ENCSR087JVK_counts_pattern_6.n_306-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR237VLT_ChIP_ZBTB40_K562_ENCSR087JVK_counts_pattern_7.n_123-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR237VLT_ChIP_ZBTB40_K562_ENCSR087JVK_counts_pattern_8.n_34-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR237VLT_ChIP_ZBTB40_K562_ENCSR087JVK_counts_pattern_9.n_28-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR318LVG_ChIP_ZBTB40_MCF-7_ENCSR580KUK_counts_pattern_0.n_8245-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR318LVG_ChIP_ZBTB40_MCF-7_ENCSR580KUK_counts_pattern_1.n_6452-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR318LVG_ChIP_ZBTB40_MCF-7_ENCSR580KUK_counts_pattern_2.n_1045-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR318LVG_ChIP_ZBTB40_MCF-7_ENCSR580KUK_counts_pattern_3.n_641-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR318LVG_ChIP_ZBTB40_MCF-7_ENCSR580KUK_counts_pattern_4.n_625-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR318LVG_ChIP_ZBTB40_MCF-7_ENCSR580KUK_counts_pattern_5.n_354-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR318LVG_ChIP_ZBTB40_MCF-7_ENCSR580KUK_counts_pattern_6.n_271-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR318LVG_ChIP_ZBTB40_MCF-7_ENCSR580KUK_counts_pattern_7.n_62-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR525YFS_ChIP_ZBTB40_HepG2_ENCSR668FSC_counts_pattern_0.n_2808-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR525YFS_ChIP_ZBTB40_HepG2_ENCSR668FSC_counts_pattern_1.n_1134-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR525YFS_ChIP_ZBTB40_HepG2_ENCSR668FSC_counts_pattern_2.n_919-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR525YFS_ChIP_ZBTB40_HepG2_ENCSR668FSC_counts_pattern_3.n_651-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR525YFS_ChIP_ZBTB40_HepG2_ENCSR668FSC_counts_pattern_4.n_510-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR525YFS_ChIP_ZBTB40_HepG2_ENCSR668FSC_counts_pattern_5.n_431-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR525YFS_ChIP_ZBTB40_HepG2_ENCSR668FSC_counts_pattern_6.n_210-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR579YNY_ChIP_ZBTB40_K562_ENCSR629SAH_counts_pattern_0.n_2649-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR579YNY_ChIP_ZBTB40_K562_ENCSR629SAH_counts_pattern_1.n_365-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR579YNY_ChIP_ZBTB40_K562_ENCSR629SAH_counts_pattern_2.n_210-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR579YNY_ChIP_ZBTB40_K562_ENCSR629SAH_counts_pattern_3.n_125-vs-ZBTB40-201.alignment counts-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB4-201/neg_patterns.ENCSR479PRL_ChIP_ZBTB4_HepG2_ENCSR910NGU_counts_pattern_0.n_272-vs-ZBTB4-201.alignment counts-znf_b1h_alignment/ZBTB4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB4-201/neg_patterns.ENCSR479PRL_ChIP_ZBTB4_HepG2_ENCSR910NGU_counts_pattern_1.n_136-vs-ZBTB4-201.alignment counts-znf_b1h_alignment/ZBTB4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB4-201/neg_patterns.ENCSR479PRL_ChIP_ZBTB4_HepG2_ENCSR910NGU_counts_pattern_2.n_109-vs-ZBTB4-201.alignment counts-znf_b1h_alignment/ZBTB4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB4-201/neg_patterns.ENCSR479PRL_ChIP_ZBTB4_HepG2_ENCSR910NGU_counts_pattern_3.n_24-vs-ZBTB4-201.alignment counts-znf_b1h_alignment/ZBTB4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB4-201/neg_patterns.ENCSR479PRL_ChIP_ZBTB4_HepG2_ENCSR910NGU_counts_pattern_4.n_23-vs-ZBTB4-201.alignment counts-znf_b1h_alignment/ZBTB4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB4-201/neg_patterns.ENCSR479PRL_ChIP_ZBTB4_HepG2_ENCSR910NGU_counts_pattern_5.n_22-vs-ZBTB4-201.alignment counts-znf_b1h_alignment/ZBTB4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB4-201/neg_patterns.ENCSR479PRL_ChIP_ZBTB4_HepG2_ENCSR910NGU_counts_pattern_6.n_21-vs-ZBTB4-201.alignment counts-znf_b1h_alignment/ZBTB4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB4-201/neg_patterns.ENCSR479PRL_ChIP_ZBTB4_HepG2_ENCSR910NGU_counts_pattern_7.n_20-vs-ZBTB4-201.alignment counts-znf_b1h_alignment/ZBTB4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB4-201/pos_patterns.ENCSR479PRL_ChIP_ZBTB4_HepG2_ENCSR910NGU_counts_pattern_0.n_2586-vs-ZBTB4-201.alignment counts-znf_b1h_alignment/ZBTB4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB4-201/pos_patterns.ENCSR479PRL_ChIP_ZBTB4_HepG2_ENCSR910NGU_counts_pattern_10.n_204-vs-ZBTB4-201.alignment counts-znf_b1h_alignment/ZBTB4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB4-201/pos_patterns.ENCSR479PRL_ChIP_ZBTB4_HepG2_ENCSR910NGU_counts_pattern_11.n_186-vs-ZBTB4-201.alignment counts-znf_b1h_alignment/ZBTB4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB4-201/pos_patterns.ENCSR479PRL_ChIP_ZBTB4_HepG2_ENCSR910NGU_counts_pattern_12.n_115-vs-ZBTB4-201.alignment counts-znf_b1h_alignment/ZBTB4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB4-201/pos_patterns.ENCSR479PRL_ChIP_ZBTB4_HepG2_ENCSR910NGU_counts_pattern_13.n_114-vs-ZBTB4-201.alignment counts-znf_b1h_alignment/ZBTB4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB4-201/pos_patterns.ENCSR479PRL_ChIP_ZBTB4_HepG2_ENCSR910NGU_counts_pattern_14.n_97-vs-ZBTB4-201.alignment counts-znf_b1h_alignment/ZBTB4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB4-201/pos_patterns.ENCSR479PRL_ChIP_ZBTB4_HepG2_ENCSR910NGU_counts_pattern_15.n_73-vs-ZBTB4-201.alignment counts-znf_b1h_alignment/ZBTB4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB4-201/pos_patterns.ENCSR479PRL_ChIP_ZBTB4_HepG2_ENCSR910NGU_counts_pattern_16.n_27-vs-ZBTB4-201.alignment counts-znf_b1h_alignment/ZBTB4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB4-201/pos_patterns.ENCSR479PRL_ChIP_ZBTB4_HepG2_ENCSR910NGU_counts_pattern_1.n_1784-vs-ZBTB4-201.alignment counts-znf_b1h_alignment/ZBTB4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB4-201/pos_patterns.ENCSR479PRL_ChIP_ZBTB4_HepG2_ENCSR910NGU_counts_pattern_2.n_1552-vs-ZBTB4-201.alignment counts-znf_b1h_alignment/ZBTB4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB4-201/pos_patterns.ENCSR479PRL_ChIP_ZBTB4_HepG2_ENCSR910NGU_counts_pattern_3.n_1262-vs-ZBTB4-201.alignment counts-znf_b1h_alignment/ZBTB4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB4-201/pos_patterns.ENCSR479PRL_ChIP_ZBTB4_HepG2_ENCSR910NGU_counts_pattern_4.n_1016-vs-ZBTB4-201.alignment counts-znf_b1h_alignment/ZBTB4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB4-201/pos_patterns.ENCSR479PRL_ChIP_ZBTB4_HepG2_ENCSR910NGU_counts_pattern_5.n_478-vs-ZBTB4-201.alignment counts-znf_b1h_alignment/ZBTB4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB4-201/pos_patterns.ENCSR479PRL_ChIP_ZBTB4_HepG2_ENCSR910NGU_counts_pattern_6.n_366-vs-ZBTB4-201.alignment counts-znf_b1h_alignment/ZBTB4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB4-201/pos_patterns.ENCSR479PRL_ChIP_ZBTB4_HepG2_ENCSR910NGU_counts_pattern_7.n_360-vs-ZBTB4-201.alignment counts-znf_b1h_alignment/ZBTB4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB4-201/pos_patterns.ENCSR479PRL_ChIP_ZBTB4_HepG2_ENCSR910NGU_counts_pattern_8.n_331-vs-ZBTB4-201.alignment counts-znf_b1h_alignment/ZBTB4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB4-201/pos_patterns.ENCSR479PRL_ChIP_ZBTB4_HepG2_ENCSR910NGU_counts_pattern_9.n_259-vs-ZBTB4-201.alignment counts-znf_b1h_alignment/ZBTB4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB4-201/pos_patterns.ENCSR691IQB_ChIP_ZBTB4_GM12878_ENCSR361MOG_counts_pattern_0.n_591-vs-ZBTB4-201.alignment counts-znf_b1h_alignment/ZBTB4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB4-201/pos_patterns.ENCSR691IQB_ChIP_ZBTB4_GM12878_ENCSR361MOG_counts_pattern_1.n_178-vs-ZBTB4-201.alignment counts-znf_b1h_alignment/ZBTB4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB4-201/pos_patterns.ENCSR691IQB_ChIP_ZBTB4_GM12878_ENCSR361MOG_counts_pattern_2.n_47-vs-ZBTB4-201.alignment counts-znf_b1h_alignment/ZBTB4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB4-201/pos_patterns.ENCSR691IQB_ChIP_ZBTB4_GM12878_ENCSR361MOG_counts_pattern_3.n_27-vs-ZBTB4-201.alignment counts-znf_b1h_alignment/ZBTB4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB4-201/pos_patterns.ENCSR691IQB_ChIP_ZBTB4_GM12878_ENCSR361MOG_counts_pattern_4.n_26-vs-ZBTB4-201.alignment counts-znf_b1h_alignment/ZBTB4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB4-201/pos_patterns.ENCSR691IQB_ChIP_ZBTB4_GM12878_ENCSR361MOG_counts_pattern_5.n_21-vs-ZBTB4-201.alignment counts-znf_b1h_alignment/ZBTB4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB42-201/Hughes_GR_models_ZBTB42_counts-pos.pattern_0.n_6749-vs-ZBTB42-201.alignment counts-znf_b1h_alignment/ZBTB42-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB42-201/Hughes_GR_models_ZBTB42_counts-pos.pattern_1.n_265-vs-ZBTB42-201.alignment counts-znf_b1h_alignment/ZBTB42-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB42-201/Hughes_GR_models_ZBTB42_counts-pos.pattern_2.n_97-vs-ZBTB42-201.alignment counts-znf_b1h_alignment/ZBTB42-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB42-201/Hughes_GR_models_ZBTB42_counts-pos.pattern_3.n_94-vs-ZBTB42-201.alignment counts-znf_b1h_alignment/ZBTB42-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB42-201/Hughes_GR_models_ZBTB42_counts-pos.pattern_4.n_57-vs-ZBTB42-201.alignment counts-znf_b1h_alignment/ZBTB42-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB42-201/pos_patterns.ENCSR232AAR_ChIP_ZBTB42_HepG2_ENCSR701JFB_counts_pattern_0.n_1857-vs-ZBTB42-201.alignment counts-znf_b1h_alignment/ZBTB42-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB42-201/pos_patterns.ENCSR232AAR_ChIP_ZBTB42_HepG2_ENCSR701JFB_counts_pattern_1.n_1401-vs-ZBTB42-201.alignment counts-znf_b1h_alignment/ZBTB42-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB42-201/pos_patterns.ENCSR232AAR_ChIP_ZBTB42_HepG2_ENCSR701JFB_counts_pattern_2.n_1253-vs-ZBTB42-201.alignment counts-znf_b1h_alignment/ZBTB42-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB42-201/pos_patterns.ENCSR232AAR_ChIP_ZBTB42_HepG2_ENCSR701JFB_counts_pattern_3.n_1197-vs-ZBTB42-201.alignment counts-znf_b1h_alignment/ZBTB42-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB42-201/pos_patterns.ENCSR232AAR_ChIP_ZBTB42_HepG2_ENCSR701JFB_counts_pattern_4.n_298-vs-ZBTB42-201.alignment counts-znf_b1h_alignment/ZBTB42-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB42-201/pos_patterns.ENCSR232AAR_ChIP_ZBTB42_HepG2_ENCSR701JFB_counts_pattern_5.n_222-vs-ZBTB42-201.alignment counts-znf_b1h_alignment/ZBTB42-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB42-201/pos_patterns.ENCSR232AAR_ChIP_ZBTB42_HepG2_ENCSR701JFB_counts_pattern_6.n_177-vs-ZBTB42-201.alignment counts-znf_b1h_alignment/ZBTB42-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB42-201/pos_patterns.ENCSR232AAR_ChIP_ZBTB42_HepG2_ENCSR701JFB_counts_pattern_7.n_61-vs-ZBTB42-201.alignment counts-znf_b1h_alignment/ZBTB42-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB42-201/pos_patterns.ENCSR232AAR_ChIP_ZBTB42_HepG2_ENCSR701JFB_counts_pattern_8.n_35-vs-ZBTB42-201.alignment counts-znf_b1h_alignment/ZBTB42-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB42-201/pos_patterns.ENCSR232AAR_ChIP_ZBTB42_HepG2_ENCSR701JFB_counts_pattern_9.n_21-vs-ZBTB42-201.alignment counts-znf_b1h_alignment/ZBTB42-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR173USN_ChIP_ZBTB43_HepG2_ENCSR113OHG_counts_pattern_0.n_2865-vs-ZBTB43-201.alignment counts-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR173USN_ChIP_ZBTB43_HepG2_ENCSR113OHG_counts_pattern_10.n_108-vs-ZBTB43-201.alignment counts-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR173USN_ChIP_ZBTB43_HepG2_ENCSR113OHG_counts_pattern_11.n_86-vs-ZBTB43-201.alignment counts-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR173USN_ChIP_ZBTB43_HepG2_ENCSR113OHG_counts_pattern_12.n_20-vs-ZBTB43-201.alignment counts-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR173USN_ChIP_ZBTB43_HepG2_ENCSR113OHG_counts_pattern_1.n_1962-vs-ZBTB43-201.alignment counts-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR173USN_ChIP_ZBTB43_HepG2_ENCSR113OHG_counts_pattern_2.n_1856-vs-ZBTB43-201.alignment counts-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR173USN_ChIP_ZBTB43_HepG2_ENCSR113OHG_counts_pattern_3.n_1159-vs-ZBTB43-201.alignment counts-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR173USN_ChIP_ZBTB43_HepG2_ENCSR113OHG_counts_pattern_4.n_994-vs-ZBTB43-201.alignment counts-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR173USN_ChIP_ZBTB43_HepG2_ENCSR113OHG_counts_pattern_5.n_986-vs-ZBTB43-201.alignment counts-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR173USN_ChIP_ZBTB43_HepG2_ENCSR113OHG_counts_pattern_6.n_481-vs-ZBTB43-201.alignment counts-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR173USN_ChIP_ZBTB43_HepG2_ENCSR113OHG_counts_pattern_7.n_274-vs-ZBTB43-201.alignment counts-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR173USN_ChIP_ZBTB43_HepG2_ENCSR113OHG_counts_pattern_8.n_195-vs-ZBTB43-201.alignment counts-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR173USN_ChIP_ZBTB43_HepG2_ENCSR113OHG_counts_pattern_9.n_168-vs-ZBTB43-201.alignment counts-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR199PXS_ChIP_ZBTB43_WTC11_ENCSR294RFH_counts_pattern_0.n_1852-vs-ZBTB43-201.alignment counts-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR199PXS_ChIP_ZBTB43_WTC11_ENCSR294RFH_counts_pattern_1.n_1330-vs-ZBTB43-201.alignment counts-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR199PXS_ChIP_ZBTB43_WTC11_ENCSR294RFH_counts_pattern_2.n_890-vs-ZBTB43-201.alignment counts-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR199PXS_ChIP_ZBTB43_WTC11_ENCSR294RFH_counts_pattern_3.n_887-vs-ZBTB43-201.alignment counts-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR199PXS_ChIP_ZBTB43_WTC11_ENCSR294RFH_counts_pattern_4.n_345-vs-ZBTB43-201.alignment counts-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR199PXS_ChIP_ZBTB43_WTC11_ENCSR294RFH_counts_pattern_5.n_344-vs-ZBTB43-201.alignment counts-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR199PXS_ChIP_ZBTB43_WTC11_ENCSR294RFH_counts_pattern_6.n_140-vs-ZBTB43-201.alignment counts-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR199PXS_ChIP_ZBTB43_WTC11_ENCSR294RFH_counts_pattern_7.n_68-vs-ZBTB43-201.alignment counts-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR800KMQ_ChIP_ZBTB43_K562_ENCSR047XIO_counts_pattern_0.n_820-vs-ZBTB43-201.alignment counts-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR800KMQ_ChIP_ZBTB43_K562_ENCSR047XIO_counts_pattern_1.n_534-vs-ZBTB43-201.alignment counts-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR800KMQ_ChIP_ZBTB43_K562_ENCSR047XIO_counts_pattern_2.n_187-vs-ZBTB43-201.alignment counts-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR800KMQ_ChIP_ZBTB43_K562_ENCSR047XIO_counts_pattern_3.n_59-vs-ZBTB43-201.alignment counts-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR800KMQ_ChIP_ZBTB43_K562_ENCSR047XIO_counts_pattern_4.n_30-vs-ZBTB43-201.alignment counts-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-201/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_0.n_4979-vs-ZBTB44-201.alignment counts-znf_b1h_alignment/ZBTB44-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-201/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_10.n_194-vs-ZBTB44-201.alignment counts-znf_b1h_alignment/ZBTB44-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-201/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_11.n_149-vs-ZBTB44-201.alignment counts-znf_b1h_alignment/ZBTB44-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-201/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_12.n_121-vs-ZBTB44-201.alignment counts-znf_b1h_alignment/ZBTB44-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-201/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_13.n_98-vs-ZBTB44-201.alignment counts-znf_b1h_alignment/ZBTB44-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-201/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_14.n_91-vs-ZBTB44-201.alignment counts-znf_b1h_alignment/ZBTB44-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-201/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_15.n_88-vs-ZBTB44-201.alignment counts-znf_b1h_alignment/ZBTB44-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-201/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_16.n_80-vs-ZBTB44-201.alignment counts-znf_b1h_alignment/ZBTB44-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-201/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_17.n_78-vs-ZBTB44-201.alignment counts-znf_b1h_alignment/ZBTB44-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-201/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_18.n_78-vs-ZBTB44-201.alignment counts-znf_b1h_alignment/ZBTB44-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-201/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_19.n_27-vs-ZBTB44-201.alignment counts-znf_b1h_alignment/ZBTB44-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-201/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_1.n_1833-vs-ZBTB44-201.alignment counts-znf_b1h_alignment/ZBTB44-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-201/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_20.n_20-vs-ZBTB44-201.alignment counts-znf_b1h_alignment/ZBTB44-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-201/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_2.n_903-vs-ZBTB44-201.alignment counts-znf_b1h_alignment/ZBTB44-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-201/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_3.n_888-vs-ZBTB44-201.alignment counts-znf_b1h_alignment/ZBTB44-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-201/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_4.n_751-vs-ZBTB44-201.alignment counts-znf_b1h_alignment/ZBTB44-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-201/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_5.n_541-vs-ZBTB44-201.alignment counts-znf_b1h_alignment/ZBTB44-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-201/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_6.n_326-vs-ZBTB44-201.alignment counts-znf_b1h_alignment/ZBTB44-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-201/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_7.n_318-vs-ZBTB44-201.alignment counts-znf_b1h_alignment/ZBTB44-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-201/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_8.n_296-vs-ZBTB44-201.alignment counts-znf_b1h_alignment/ZBTB44-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-201/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_9.n_235-vs-ZBTB44-201.alignment counts-znf_b1h_alignment/ZBTB44-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-201/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_0.n_786-vs-ZBTB44-201.alignment counts-znf_b1h_alignment/ZBTB44-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-201/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_10.n_139-vs-ZBTB44-201.alignment counts-znf_b1h_alignment/ZBTB44-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-201/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_11.n_127-vs-ZBTB44-201.alignment counts-znf_b1h_alignment/ZBTB44-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-201/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_12.n_123-vs-ZBTB44-201.alignment counts-znf_b1h_alignment/ZBTB44-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-201/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_13.n_87-vs-ZBTB44-201.alignment counts-znf_b1h_alignment/ZBTB44-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-201/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_14.n_82-vs-ZBTB44-201.alignment counts-znf_b1h_alignment/ZBTB44-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-201/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_15.n_71-vs-ZBTB44-201.alignment counts-znf_b1h_alignment/ZBTB44-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-201/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_16.n_67-vs-ZBTB44-201.alignment counts-znf_b1h_alignment/ZBTB44-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-201/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_17.n_46-vs-ZBTB44-201.alignment counts-znf_b1h_alignment/ZBTB44-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-201/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_18.n_43-vs-ZBTB44-201.alignment counts-znf_b1h_alignment/ZBTB44-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-201/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_19.n_37-vs-ZBTB44-201.alignment counts-znf_b1h_alignment/ZBTB44-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-201/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_1.n_433-vs-ZBTB44-201.alignment counts-znf_b1h_alignment/ZBTB44-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-201/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_2.n_400-vs-ZBTB44-201.alignment counts-znf_b1h_alignment/ZBTB44-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-201/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_3.n_381-vs-ZBTB44-201.alignment counts-znf_b1h_alignment/ZBTB44-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-201/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_4.n_303-vs-ZBTB44-201.alignment counts-znf_b1h_alignment/ZBTB44-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-201/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_5.n_285-vs-ZBTB44-201.alignment counts-znf_b1h_alignment/ZBTB44-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-201/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_6.n_270-vs-ZBTB44-201.alignment counts-znf_b1h_alignment/ZBTB44-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-201/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_7.n_257-vs-ZBTB44-201.alignment counts-znf_b1h_alignment/ZBTB44-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-201/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_8.n_176-vs-ZBTB44-201.alignment counts-znf_b1h_alignment/ZBTB44-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-201/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_9.n_174-vs-ZBTB44-201.alignment counts-znf_b1h_alignment/ZBTB44-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-203/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_0.n_4979-vs-ZBTB44-203.alignment counts-znf_b1h_alignment/ZBTB44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-203/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_10.n_194-vs-ZBTB44-203.alignment counts-znf_b1h_alignment/ZBTB44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-203/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_11.n_149-vs-ZBTB44-203.alignment counts-znf_b1h_alignment/ZBTB44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-203/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_12.n_121-vs-ZBTB44-203.alignment counts-znf_b1h_alignment/ZBTB44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-203/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_13.n_98-vs-ZBTB44-203.alignment counts-znf_b1h_alignment/ZBTB44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-203/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_14.n_91-vs-ZBTB44-203.alignment counts-znf_b1h_alignment/ZBTB44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-203/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_15.n_88-vs-ZBTB44-203.alignment counts-znf_b1h_alignment/ZBTB44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-203/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_16.n_80-vs-ZBTB44-203.alignment counts-znf_b1h_alignment/ZBTB44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-203/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_17.n_78-vs-ZBTB44-203.alignment counts-znf_b1h_alignment/ZBTB44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-203/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_18.n_78-vs-ZBTB44-203.alignment counts-znf_b1h_alignment/ZBTB44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-203/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_19.n_27-vs-ZBTB44-203.alignment counts-znf_b1h_alignment/ZBTB44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-203/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_1.n_1833-vs-ZBTB44-203.alignment counts-znf_b1h_alignment/ZBTB44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-203/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_20.n_20-vs-ZBTB44-203.alignment counts-znf_b1h_alignment/ZBTB44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-203/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_2.n_903-vs-ZBTB44-203.alignment counts-znf_b1h_alignment/ZBTB44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-203/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_3.n_888-vs-ZBTB44-203.alignment counts-znf_b1h_alignment/ZBTB44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-203/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_4.n_751-vs-ZBTB44-203.alignment counts-znf_b1h_alignment/ZBTB44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-203/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_5.n_541-vs-ZBTB44-203.alignment counts-znf_b1h_alignment/ZBTB44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-203/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_6.n_326-vs-ZBTB44-203.alignment counts-znf_b1h_alignment/ZBTB44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-203/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_7.n_318-vs-ZBTB44-203.alignment counts-znf_b1h_alignment/ZBTB44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-203/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_8.n_296-vs-ZBTB44-203.alignment counts-znf_b1h_alignment/ZBTB44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-203/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_9.n_235-vs-ZBTB44-203.alignment counts-znf_b1h_alignment/ZBTB44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-203/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_0.n_786-vs-ZBTB44-203.alignment counts-znf_b1h_alignment/ZBTB44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-203/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_10.n_139-vs-ZBTB44-203.alignment counts-znf_b1h_alignment/ZBTB44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-203/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_11.n_127-vs-ZBTB44-203.alignment counts-znf_b1h_alignment/ZBTB44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-203/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_12.n_123-vs-ZBTB44-203.alignment counts-znf_b1h_alignment/ZBTB44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-203/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_13.n_87-vs-ZBTB44-203.alignment counts-znf_b1h_alignment/ZBTB44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-203/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_14.n_82-vs-ZBTB44-203.alignment counts-znf_b1h_alignment/ZBTB44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-203/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_15.n_71-vs-ZBTB44-203.alignment counts-znf_b1h_alignment/ZBTB44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-203/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_16.n_67-vs-ZBTB44-203.alignment counts-znf_b1h_alignment/ZBTB44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-203/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_17.n_46-vs-ZBTB44-203.alignment counts-znf_b1h_alignment/ZBTB44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-203/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_18.n_43-vs-ZBTB44-203.alignment counts-znf_b1h_alignment/ZBTB44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-203/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_19.n_37-vs-ZBTB44-203.alignment counts-znf_b1h_alignment/ZBTB44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-203/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_1.n_433-vs-ZBTB44-203.alignment counts-znf_b1h_alignment/ZBTB44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-203/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_2.n_400-vs-ZBTB44-203.alignment counts-znf_b1h_alignment/ZBTB44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-203/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_3.n_381-vs-ZBTB44-203.alignment counts-znf_b1h_alignment/ZBTB44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-203/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_4.n_303-vs-ZBTB44-203.alignment counts-znf_b1h_alignment/ZBTB44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-203/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_5.n_285-vs-ZBTB44-203.alignment counts-znf_b1h_alignment/ZBTB44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-203/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_6.n_270-vs-ZBTB44-203.alignment counts-znf_b1h_alignment/ZBTB44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-203/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_7.n_257-vs-ZBTB44-203.alignment counts-znf_b1h_alignment/ZBTB44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-203/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_8.n_176-vs-ZBTB44-203.alignment counts-znf_b1h_alignment/ZBTB44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-203/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_9.n_174-vs-ZBTB44-203.alignment counts-znf_b1h_alignment/ZBTB44-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-204/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_0.n_4979-vs-ZBTB44-204.alignment counts-znf_b1h_alignment/ZBTB44-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-204/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_10.n_194-vs-ZBTB44-204.alignment counts-znf_b1h_alignment/ZBTB44-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-204/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_11.n_149-vs-ZBTB44-204.alignment counts-znf_b1h_alignment/ZBTB44-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-204/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_12.n_121-vs-ZBTB44-204.alignment counts-znf_b1h_alignment/ZBTB44-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-204/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_13.n_98-vs-ZBTB44-204.alignment counts-znf_b1h_alignment/ZBTB44-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-204/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_14.n_91-vs-ZBTB44-204.alignment counts-znf_b1h_alignment/ZBTB44-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-204/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_15.n_88-vs-ZBTB44-204.alignment counts-znf_b1h_alignment/ZBTB44-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-204/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_16.n_80-vs-ZBTB44-204.alignment counts-znf_b1h_alignment/ZBTB44-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-204/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_17.n_78-vs-ZBTB44-204.alignment counts-znf_b1h_alignment/ZBTB44-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-204/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_18.n_78-vs-ZBTB44-204.alignment counts-znf_b1h_alignment/ZBTB44-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-204/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_19.n_27-vs-ZBTB44-204.alignment counts-znf_b1h_alignment/ZBTB44-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-204/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_1.n_1833-vs-ZBTB44-204.alignment counts-znf_b1h_alignment/ZBTB44-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-204/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_20.n_20-vs-ZBTB44-204.alignment counts-znf_b1h_alignment/ZBTB44-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-204/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_2.n_903-vs-ZBTB44-204.alignment counts-znf_b1h_alignment/ZBTB44-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-204/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_3.n_888-vs-ZBTB44-204.alignment counts-znf_b1h_alignment/ZBTB44-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-204/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_4.n_751-vs-ZBTB44-204.alignment counts-znf_b1h_alignment/ZBTB44-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-204/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_5.n_541-vs-ZBTB44-204.alignment counts-znf_b1h_alignment/ZBTB44-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-204/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_6.n_326-vs-ZBTB44-204.alignment counts-znf_b1h_alignment/ZBTB44-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-204/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_7.n_318-vs-ZBTB44-204.alignment counts-znf_b1h_alignment/ZBTB44-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-204/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_8.n_296-vs-ZBTB44-204.alignment counts-znf_b1h_alignment/ZBTB44-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-204/pos_patterns.ENCSR076STQ_ChIP_ZBTB44_HEK293_ENCSR015WPQ_counts_pattern_9.n_235-vs-ZBTB44-204.alignment counts-znf_b1h_alignment/ZBTB44-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-204/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_0.n_786-vs-ZBTB44-204.alignment counts-znf_b1h_alignment/ZBTB44-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-204/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_10.n_139-vs-ZBTB44-204.alignment counts-znf_b1h_alignment/ZBTB44-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-204/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_11.n_127-vs-ZBTB44-204.alignment counts-znf_b1h_alignment/ZBTB44-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-204/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_12.n_123-vs-ZBTB44-204.alignment counts-znf_b1h_alignment/ZBTB44-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-204/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_13.n_87-vs-ZBTB44-204.alignment counts-znf_b1h_alignment/ZBTB44-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-204/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_14.n_82-vs-ZBTB44-204.alignment counts-znf_b1h_alignment/ZBTB44-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-204/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_15.n_71-vs-ZBTB44-204.alignment counts-znf_b1h_alignment/ZBTB44-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-204/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_16.n_67-vs-ZBTB44-204.alignment counts-znf_b1h_alignment/ZBTB44-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-204/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_17.n_46-vs-ZBTB44-204.alignment counts-znf_b1h_alignment/ZBTB44-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-204/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_18.n_43-vs-ZBTB44-204.alignment counts-znf_b1h_alignment/ZBTB44-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-204/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_19.n_37-vs-ZBTB44-204.alignment counts-znf_b1h_alignment/ZBTB44-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-204/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_1.n_433-vs-ZBTB44-204.alignment counts-znf_b1h_alignment/ZBTB44-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-204/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_2.n_400-vs-ZBTB44-204.alignment counts-znf_b1h_alignment/ZBTB44-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-204/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_3.n_381-vs-ZBTB44-204.alignment counts-znf_b1h_alignment/ZBTB44-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-204/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_4.n_303-vs-ZBTB44-204.alignment counts-znf_b1h_alignment/ZBTB44-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-204/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_5.n_285-vs-ZBTB44-204.alignment counts-znf_b1h_alignment/ZBTB44-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-204/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_6.n_270-vs-ZBTB44-204.alignment counts-znf_b1h_alignment/ZBTB44-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-204/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_7.n_257-vs-ZBTB44-204.alignment counts-znf_b1h_alignment/ZBTB44-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-204/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_8.n_176-vs-ZBTB44-204.alignment counts-znf_b1h_alignment/ZBTB44-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB44-204/pos_patterns.ENCSR269MEF_ChIP_ZBTB44_HepG2_ENCSR516KAO_counts_pattern_9.n_174-vs-ZBTB44-204.alignment counts-znf_b1h_alignment/ZBTB44-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB46-201/neg_patterns.ENCSR931SYA_ChIP_ZBTB46_HepG2_ENCSR310FNL_counts_pattern_0.n_166-vs-ZBTB46-201.alignment counts-znf_b1h_alignment/ZBTB46-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB46-201/neg_patterns.ENCSR931SYA_ChIP_ZBTB46_HepG2_ENCSR310FNL_counts_pattern_1.n_31-vs-ZBTB46-201.alignment counts-znf_b1h_alignment/ZBTB46-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB46-201/neg_patterns.ENCSR931SYA_ChIP_ZBTB46_HepG2_ENCSR310FNL_counts_pattern_2.n_20-vs-ZBTB46-201.alignment counts-znf_b1h_alignment/ZBTB46-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB46-201/pos_patterns.ENCSR931SYA_ChIP_ZBTB46_HepG2_ENCSR310FNL_counts_pattern_0.n_2777-vs-ZBTB46-201.alignment counts-znf_b1h_alignment/ZBTB46-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB46-201/pos_patterns.ENCSR931SYA_ChIP_ZBTB46_HepG2_ENCSR310FNL_counts_pattern_1.n_728-vs-ZBTB46-201.alignment counts-znf_b1h_alignment/ZBTB46-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB46-201/pos_patterns.ENCSR931SYA_ChIP_ZBTB46_HepG2_ENCSR310FNL_counts_pattern_2.n_20-vs-ZBTB46-201.alignment counts-znf_b1h_alignment/ZBTB46-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB48-202/Hughes_GR_models_ZBTB48_counts-pos.pattern_0.n_13545-vs-ZBTB48-202.alignment counts-znf_b1h_alignment/ZBTB48-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB48-202/Hughes_GR_models_ZBTB48_counts-pos.pattern_1.n_2355-vs-ZBTB48-202.alignment counts-znf_b1h_alignment/ZBTB48-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB48-202/Hughes_GR_models_ZBTB48_counts-pos.pattern_2.n_732-vs-ZBTB48-202.alignment counts-znf_b1h_alignment/ZBTB48-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB48-202/Hughes_GR_models_ZBTB48_counts-pos.pattern_3.n_33-vs-ZBTB48-202.alignment counts-znf_b1h_alignment/ZBTB48-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB48-202/Hughes_GR_models_ZBTB48_counts-pos.pattern_4.n_24-vs-ZBTB48-202.alignment counts-znf_b1h_alignment/ZBTB48-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB48-202/pos_patterns.ENCSR781EQJ_ChIP_ZBTB48_HEK293_ENCSR798RSV_counts_pattern_0.n_13694-vs-ZBTB48-202.alignment counts-znf_b1h_alignment/ZBTB48-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB48-202/pos_patterns.ENCSR781EQJ_ChIP_ZBTB48_HEK293_ENCSR798RSV_counts_pattern_1.n_78-vs-ZBTB48-202.alignment counts-znf_b1h_alignment/ZBTB48-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB48-202/pos_patterns.ENCSR781EQJ_ChIP_ZBTB48_HEK293_ENCSR798RSV_counts_pattern_2.n_75-vs-ZBTB48-202.alignment counts-znf_b1h_alignment/ZBTB48-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB48-202/pos_patterns.ENCSR781EQJ_ChIP_ZBTB48_HEK293_ENCSR798RSV_counts_pattern_3.n_73-vs-ZBTB48-202.alignment counts-znf_b1h_alignment/ZBTB48-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB48-202/pos_patterns.ENCSR781EQJ_ChIP_ZBTB48_HEK293_ENCSR798RSV_counts_pattern_4.n_66-vs-ZBTB48-202.alignment counts-znf_b1h_alignment/ZBTB48-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB48-202/pos_patterns.ENCSR781EQJ_ChIP_ZBTB48_HEK293_ENCSR798RSV_counts_pattern_5.n_27-vs-ZBTB48-202.alignment counts-znf_b1h_alignment/ZBTB48-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB48-202/pos_patterns.ENCSR781EQJ_ChIP_ZBTB48_HEK293_ENCSR798RSV_counts_pattern_6.n_21-vs-ZBTB48-202.alignment counts-znf_b1h_alignment/ZBTB48-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB48-206/Hughes_GR_models_ZBTB48_counts-pos.pattern_0.n_13545-vs-ZBTB48-206.alignment counts-znf_b1h_alignment/ZBTB48-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB48-206/Hughes_GR_models_ZBTB48_counts-pos.pattern_1.n_2355-vs-ZBTB48-206.alignment counts-znf_b1h_alignment/ZBTB48-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB48-206/Hughes_GR_models_ZBTB48_counts-pos.pattern_2.n_732-vs-ZBTB48-206.alignment counts-znf_b1h_alignment/ZBTB48-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB48-206/Hughes_GR_models_ZBTB48_counts-pos.pattern_3.n_33-vs-ZBTB48-206.alignment counts-znf_b1h_alignment/ZBTB48-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB48-206/Hughes_GR_models_ZBTB48_counts-pos.pattern_4.n_24-vs-ZBTB48-206.alignment counts-znf_b1h_alignment/ZBTB48-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB48-206/pos_patterns.ENCSR781EQJ_ChIP_ZBTB48_HEK293_ENCSR798RSV_counts_pattern_0.n_13694-vs-ZBTB48-206.alignment counts-znf_b1h_alignment/ZBTB48-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB48-206/pos_patterns.ENCSR781EQJ_ChIP_ZBTB48_HEK293_ENCSR798RSV_counts_pattern_1.n_78-vs-ZBTB48-206.alignment counts-znf_b1h_alignment/ZBTB48-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB48-206/pos_patterns.ENCSR781EQJ_ChIP_ZBTB48_HEK293_ENCSR798RSV_counts_pattern_2.n_75-vs-ZBTB48-206.alignment counts-znf_b1h_alignment/ZBTB48-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB48-206/pos_patterns.ENCSR781EQJ_ChIP_ZBTB48_HEK293_ENCSR798RSV_counts_pattern_3.n_73-vs-ZBTB48-206.alignment counts-znf_b1h_alignment/ZBTB48-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB48-206/pos_patterns.ENCSR781EQJ_ChIP_ZBTB48_HEK293_ENCSR798RSV_counts_pattern_4.n_66-vs-ZBTB48-206.alignment counts-znf_b1h_alignment/ZBTB48-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB48-206/pos_patterns.ENCSR781EQJ_ChIP_ZBTB48_HEK293_ENCSR798RSV_counts_pattern_5.n_27-vs-ZBTB48-206.alignment counts-znf_b1h_alignment/ZBTB48-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB48-206/pos_patterns.ENCSR781EQJ_ChIP_ZBTB48_HEK293_ENCSR798RSV_counts_pattern_6.n_21-vs-ZBTB48-206.alignment counts-znf_b1h_alignment/ZBTB48-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB48-208/Hughes_GR_models_ZBTB48_counts-pos.pattern_0.n_13545-vs-ZBTB48-208.alignment counts-znf_b1h_alignment/ZBTB48-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB48-208/Hughes_GR_models_ZBTB48_counts-pos.pattern_1.n_2355-vs-ZBTB48-208.alignment counts-znf_b1h_alignment/ZBTB48-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB48-208/Hughes_GR_models_ZBTB48_counts-pos.pattern_2.n_732-vs-ZBTB48-208.alignment counts-znf_b1h_alignment/ZBTB48-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB48-208/Hughes_GR_models_ZBTB48_counts-pos.pattern_3.n_33-vs-ZBTB48-208.alignment counts-znf_b1h_alignment/ZBTB48-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB48-208/Hughes_GR_models_ZBTB48_counts-pos.pattern_4.n_24-vs-ZBTB48-208.alignment counts-znf_b1h_alignment/ZBTB48-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB48-208/pos_patterns.ENCSR781EQJ_ChIP_ZBTB48_HEK293_ENCSR798RSV_counts_pattern_0.n_13694-vs-ZBTB48-208.alignment counts-znf_b1h_alignment/ZBTB48-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB48-208/pos_patterns.ENCSR781EQJ_ChIP_ZBTB48_HEK293_ENCSR798RSV_counts_pattern_1.n_78-vs-ZBTB48-208.alignment counts-znf_b1h_alignment/ZBTB48-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB48-208/pos_patterns.ENCSR781EQJ_ChIP_ZBTB48_HEK293_ENCSR798RSV_counts_pattern_2.n_75-vs-ZBTB48-208.alignment counts-znf_b1h_alignment/ZBTB48-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB48-208/pos_patterns.ENCSR781EQJ_ChIP_ZBTB48_HEK293_ENCSR798RSV_counts_pattern_3.n_73-vs-ZBTB48-208.alignment counts-znf_b1h_alignment/ZBTB48-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB48-208/pos_patterns.ENCSR781EQJ_ChIP_ZBTB48_HEK293_ENCSR798RSV_counts_pattern_4.n_66-vs-ZBTB48-208.alignment counts-znf_b1h_alignment/ZBTB48-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB48-208/pos_patterns.ENCSR781EQJ_ChIP_ZBTB48_HEK293_ENCSR798RSV_counts_pattern_5.n_27-vs-ZBTB48-208.alignment counts-znf_b1h_alignment/ZBTB48-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB48-208/pos_patterns.ENCSR781EQJ_ChIP_ZBTB48_HEK293_ENCSR798RSV_counts_pattern_6.n_21-vs-ZBTB48-208.alignment counts-znf_b1h_alignment/ZBTB48-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/neg_patterns.ENCSR249VFB_ChIP_ZBTB49_K562_ENCSR409OIO_counts_pattern_0.n_35-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR249VFB_ChIP_ZBTB49_K562_ENCSR409OIO_counts_pattern_0.n_986-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR249VFB_ChIP_ZBTB49_K562_ENCSR409OIO_counts_pattern_10.n_71-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR249VFB_ChIP_ZBTB49_K562_ENCSR409OIO_counts_pattern_11.n_64-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR249VFB_ChIP_ZBTB49_K562_ENCSR409OIO_counts_pattern_12.n_52-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR249VFB_ChIP_ZBTB49_K562_ENCSR409OIO_counts_pattern_13.n_48-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR249VFB_ChIP_ZBTB49_K562_ENCSR409OIO_counts_pattern_14.n_38-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR249VFB_ChIP_ZBTB49_K562_ENCSR409OIO_counts_pattern_15.n_26-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR249VFB_ChIP_ZBTB49_K562_ENCSR409OIO_counts_pattern_1.n_373-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR249VFB_ChIP_ZBTB49_K562_ENCSR409OIO_counts_pattern_2.n_350-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR249VFB_ChIP_ZBTB49_K562_ENCSR409OIO_counts_pattern_3.n_194-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR249VFB_ChIP_ZBTB49_K562_ENCSR409OIO_counts_pattern_4.n_156-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR249VFB_ChIP_ZBTB49_K562_ENCSR409OIO_counts_pattern_5.n_140-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR249VFB_ChIP_ZBTB49_K562_ENCSR409OIO_counts_pattern_6.n_139-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR249VFB_ChIP_ZBTB49_K562_ENCSR409OIO_counts_pattern_7.n_118-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR249VFB_ChIP_ZBTB49_K562_ENCSR409OIO_counts_pattern_8.n_116-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR249VFB_ChIP_ZBTB49_K562_ENCSR409OIO_counts_pattern_9.n_85-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR803IYP_ChIP_ZBTB49_HepG2_ENCSR583ATC_counts_pattern_0.n_521-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR803IYP_ChIP_ZBTB49_HepG2_ENCSR583ATC_counts_pattern_10.n_78-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR803IYP_ChIP_ZBTB49_HepG2_ENCSR583ATC_counts_pattern_11.n_70-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR803IYP_ChIP_ZBTB49_HepG2_ENCSR583ATC_counts_pattern_12.n_63-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR803IYP_ChIP_ZBTB49_HepG2_ENCSR583ATC_counts_pattern_13.n_61-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR803IYP_ChIP_ZBTB49_HepG2_ENCSR583ATC_counts_pattern_14.n_60-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR803IYP_ChIP_ZBTB49_HepG2_ENCSR583ATC_counts_pattern_15.n_51-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR803IYP_ChIP_ZBTB49_HepG2_ENCSR583ATC_counts_pattern_16.n_51-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR803IYP_ChIP_ZBTB49_HepG2_ENCSR583ATC_counts_pattern_17.n_49-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR803IYP_ChIP_ZBTB49_HepG2_ENCSR583ATC_counts_pattern_18.n_45-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR803IYP_ChIP_ZBTB49_HepG2_ENCSR583ATC_counts_pattern_19.n_40-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR803IYP_ChIP_ZBTB49_HepG2_ENCSR583ATC_counts_pattern_1.n_441-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR803IYP_ChIP_ZBTB49_HepG2_ENCSR583ATC_counts_pattern_20.n_24-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR803IYP_ChIP_ZBTB49_HepG2_ENCSR583ATC_counts_pattern_21.n_22-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR803IYP_ChIP_ZBTB49_HepG2_ENCSR583ATC_counts_pattern_2.n_343-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR803IYP_ChIP_ZBTB49_HepG2_ENCSR583ATC_counts_pattern_3.n_295-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR803IYP_ChIP_ZBTB49_HepG2_ENCSR583ATC_counts_pattern_4.n_232-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR803IYP_ChIP_ZBTB49_HepG2_ENCSR583ATC_counts_pattern_5.n_147-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR803IYP_ChIP_ZBTB49_HepG2_ENCSR583ATC_counts_pattern_6.n_134-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR803IYP_ChIP_ZBTB49_HepG2_ENCSR583ATC_counts_pattern_7.n_113-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR803IYP_ChIP_ZBTB49_HepG2_ENCSR583ATC_counts_pattern_8.n_95-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR803IYP_ChIP_ZBTB49_HepG2_ENCSR583ATC_counts_pattern_9.n_90-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR924GRG_ChIP_ZBTB49_HEK293_ENCSR987MZP_counts_pattern_0.n_105-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR924GRG_ChIP_ZBTB49_HEK293_ENCSR987MZP_counts_pattern_10.n_35-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR924GRG_ChIP_ZBTB49_HEK293_ENCSR987MZP_counts_pattern_11.n_32-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR924GRG_ChIP_ZBTB49_HEK293_ENCSR987MZP_counts_pattern_12.n_32-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR924GRG_ChIP_ZBTB49_HEK293_ENCSR987MZP_counts_pattern_13.n_25-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR924GRG_ChIP_ZBTB49_HEK293_ENCSR987MZP_counts_pattern_14.n_22-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR924GRG_ChIP_ZBTB49_HEK293_ENCSR987MZP_counts_pattern_1.n_94-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR924GRG_ChIP_ZBTB49_HEK293_ENCSR987MZP_counts_pattern_2.n_61-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR924GRG_ChIP_ZBTB49_HEK293_ENCSR987MZP_counts_pattern_3.n_51-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR924GRG_ChIP_ZBTB49_HEK293_ENCSR987MZP_counts_pattern_4.n_46-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR924GRG_ChIP_ZBTB49_HEK293_ENCSR987MZP_counts_pattern_5.n_42-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR924GRG_ChIP_ZBTB49_HEK293_ENCSR987MZP_counts_pattern_6.n_37-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR924GRG_ChIP_ZBTB49_HEK293_ENCSR987MZP_counts_pattern_7.n_37-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR924GRG_ChIP_ZBTB49_HEK293_ENCSR987MZP_counts_pattern_8.n_37-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-201/pos_patterns.ENCSR924GRG_ChIP_ZBTB49_HEK293_ENCSR987MZP_counts_pattern_9.n_36-vs-ZBTB49-201.alignment counts-znf_b1h_alignment/ZBTB49-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/neg_patterns.ENCSR249VFB_ChIP_ZBTB49_K562_ENCSR409OIO_counts_pattern_0.n_35-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR249VFB_ChIP_ZBTB49_K562_ENCSR409OIO_counts_pattern_0.n_986-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR249VFB_ChIP_ZBTB49_K562_ENCSR409OIO_counts_pattern_10.n_71-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR249VFB_ChIP_ZBTB49_K562_ENCSR409OIO_counts_pattern_11.n_64-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR249VFB_ChIP_ZBTB49_K562_ENCSR409OIO_counts_pattern_12.n_52-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR249VFB_ChIP_ZBTB49_K562_ENCSR409OIO_counts_pattern_13.n_48-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR249VFB_ChIP_ZBTB49_K562_ENCSR409OIO_counts_pattern_14.n_38-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR249VFB_ChIP_ZBTB49_K562_ENCSR409OIO_counts_pattern_15.n_26-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR249VFB_ChIP_ZBTB49_K562_ENCSR409OIO_counts_pattern_1.n_373-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR249VFB_ChIP_ZBTB49_K562_ENCSR409OIO_counts_pattern_2.n_350-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR249VFB_ChIP_ZBTB49_K562_ENCSR409OIO_counts_pattern_3.n_194-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR249VFB_ChIP_ZBTB49_K562_ENCSR409OIO_counts_pattern_4.n_156-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR249VFB_ChIP_ZBTB49_K562_ENCSR409OIO_counts_pattern_5.n_140-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR249VFB_ChIP_ZBTB49_K562_ENCSR409OIO_counts_pattern_6.n_139-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR249VFB_ChIP_ZBTB49_K562_ENCSR409OIO_counts_pattern_7.n_118-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR249VFB_ChIP_ZBTB49_K562_ENCSR409OIO_counts_pattern_8.n_116-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR249VFB_ChIP_ZBTB49_K562_ENCSR409OIO_counts_pattern_9.n_85-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR803IYP_ChIP_ZBTB49_HepG2_ENCSR583ATC_counts_pattern_0.n_521-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR803IYP_ChIP_ZBTB49_HepG2_ENCSR583ATC_counts_pattern_10.n_78-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR803IYP_ChIP_ZBTB49_HepG2_ENCSR583ATC_counts_pattern_11.n_70-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR803IYP_ChIP_ZBTB49_HepG2_ENCSR583ATC_counts_pattern_12.n_63-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR803IYP_ChIP_ZBTB49_HepG2_ENCSR583ATC_counts_pattern_13.n_61-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR803IYP_ChIP_ZBTB49_HepG2_ENCSR583ATC_counts_pattern_14.n_60-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR803IYP_ChIP_ZBTB49_HepG2_ENCSR583ATC_counts_pattern_15.n_51-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR803IYP_ChIP_ZBTB49_HepG2_ENCSR583ATC_counts_pattern_16.n_51-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR803IYP_ChIP_ZBTB49_HepG2_ENCSR583ATC_counts_pattern_17.n_49-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR803IYP_ChIP_ZBTB49_HepG2_ENCSR583ATC_counts_pattern_18.n_45-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR803IYP_ChIP_ZBTB49_HepG2_ENCSR583ATC_counts_pattern_19.n_40-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR803IYP_ChIP_ZBTB49_HepG2_ENCSR583ATC_counts_pattern_1.n_441-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR803IYP_ChIP_ZBTB49_HepG2_ENCSR583ATC_counts_pattern_20.n_24-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR803IYP_ChIP_ZBTB49_HepG2_ENCSR583ATC_counts_pattern_21.n_22-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR803IYP_ChIP_ZBTB49_HepG2_ENCSR583ATC_counts_pattern_2.n_343-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR803IYP_ChIP_ZBTB49_HepG2_ENCSR583ATC_counts_pattern_3.n_295-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR803IYP_ChIP_ZBTB49_HepG2_ENCSR583ATC_counts_pattern_4.n_232-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR803IYP_ChIP_ZBTB49_HepG2_ENCSR583ATC_counts_pattern_5.n_147-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR803IYP_ChIP_ZBTB49_HepG2_ENCSR583ATC_counts_pattern_6.n_134-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR803IYP_ChIP_ZBTB49_HepG2_ENCSR583ATC_counts_pattern_7.n_113-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR803IYP_ChIP_ZBTB49_HepG2_ENCSR583ATC_counts_pattern_8.n_95-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR803IYP_ChIP_ZBTB49_HepG2_ENCSR583ATC_counts_pattern_9.n_90-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR924GRG_ChIP_ZBTB49_HEK293_ENCSR987MZP_counts_pattern_0.n_105-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR924GRG_ChIP_ZBTB49_HEK293_ENCSR987MZP_counts_pattern_10.n_35-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR924GRG_ChIP_ZBTB49_HEK293_ENCSR987MZP_counts_pattern_11.n_32-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR924GRG_ChIP_ZBTB49_HEK293_ENCSR987MZP_counts_pattern_12.n_32-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR924GRG_ChIP_ZBTB49_HEK293_ENCSR987MZP_counts_pattern_13.n_25-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR924GRG_ChIP_ZBTB49_HEK293_ENCSR987MZP_counts_pattern_14.n_22-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR924GRG_ChIP_ZBTB49_HEK293_ENCSR987MZP_counts_pattern_1.n_94-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR924GRG_ChIP_ZBTB49_HEK293_ENCSR987MZP_counts_pattern_2.n_61-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR924GRG_ChIP_ZBTB49_HEK293_ENCSR987MZP_counts_pattern_3.n_51-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR924GRG_ChIP_ZBTB49_HEK293_ENCSR987MZP_counts_pattern_4.n_46-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR924GRG_ChIP_ZBTB49_HEK293_ENCSR987MZP_counts_pattern_5.n_42-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR924GRG_ChIP_ZBTB49_HEK293_ENCSR987MZP_counts_pattern_6.n_37-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR924GRG_ChIP_ZBTB49_HEK293_ENCSR987MZP_counts_pattern_7.n_37-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR924GRG_ChIP_ZBTB49_HEK293_ENCSR987MZP_counts_pattern_8.n_37-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB49-206/pos_patterns.ENCSR924GRG_ChIP_ZBTB49_HEK293_ENCSR987MZP_counts_pattern_9.n_36-vs-ZBTB49-206.alignment counts-znf_b1h_alignment/ZBTB49-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR389PWB_ChIP_ZBTB5_K562_ENCSR473KQM_counts_pattern_0.n_803-vs-ZBTB5-201.alignment counts-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR389PWB_ChIP_ZBTB5_K562_ENCSR473KQM_counts_pattern_1.n_203-vs-ZBTB5-201.alignment counts-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR389PWB_ChIP_ZBTB5_K562_ENCSR473KQM_counts_pattern_2.n_150-vs-ZBTB5-201.alignment counts-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR389PWB_ChIP_ZBTB5_K562_ENCSR473KQM_counts_pattern_3.n_141-vs-ZBTB5-201.alignment counts-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR389PWB_ChIP_ZBTB5_K562_ENCSR473KQM_counts_pattern_4.n_75-vs-ZBTB5-201.alignment counts-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR389PWB_ChIP_ZBTB5_K562_ENCSR473KQM_counts_pattern_5.n_65-vs-ZBTB5-201.alignment counts-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR389PWB_ChIP_ZBTB5_K562_ENCSR473KQM_counts_pattern_6.n_60-vs-ZBTB5-201.alignment counts-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR389PWB_ChIP_ZBTB5_K562_ENCSR473KQM_counts_pattern_7.n_36-vs-ZBTB5-201.alignment counts-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR389PWB_ChIP_ZBTB5_K562_ENCSR473KQM_counts_pattern_8.n_20-vs-ZBTB5-201.alignment counts-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR786OQY_ChIP_ZBTB5_K562_ENCSR012UFW_counts_pattern_0.n_943-vs-ZBTB5-201.alignment counts-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR786OQY_ChIP_ZBTB5_K562_ENCSR012UFW_counts_pattern_10.n_32-vs-ZBTB5-201.alignment counts-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR786OQY_ChIP_ZBTB5_K562_ENCSR012UFW_counts_pattern_11.n_25-vs-ZBTB5-201.alignment counts-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR786OQY_ChIP_ZBTB5_K562_ENCSR012UFW_counts_pattern_1.n_206-vs-ZBTB5-201.alignment counts-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR786OQY_ChIP_ZBTB5_K562_ENCSR012UFW_counts_pattern_2.n_128-vs-ZBTB5-201.alignment counts-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR786OQY_ChIP_ZBTB5_K562_ENCSR012UFW_counts_pattern_3.n_109-vs-ZBTB5-201.alignment counts-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR786OQY_ChIP_ZBTB5_K562_ENCSR012UFW_counts_pattern_4.n_80-vs-ZBTB5-201.alignment counts-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR786OQY_ChIP_ZBTB5_K562_ENCSR012UFW_counts_pattern_5.n_50-vs-ZBTB5-201.alignment counts-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR786OQY_ChIP_ZBTB5_K562_ENCSR012UFW_counts_pattern_6.n_48-vs-ZBTB5-201.alignment counts-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR786OQY_ChIP_ZBTB5_K562_ENCSR012UFW_counts_pattern_7.n_48-vs-ZBTB5-201.alignment counts-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR786OQY_ChIP_ZBTB5_K562_ENCSR012UFW_counts_pattern_8.n_39-vs-ZBTB5-201.alignment counts-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR786OQY_ChIP_ZBTB5_K562_ENCSR012UFW_counts_pattern_9.n_34-vs-ZBTB5-201.alignment counts-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB6-201/pos_patterns.ENCSR619OUC_ChIP_ZBTB6_HEK293_ENCSR309MGH_counts_pattern_0.n_11024-vs-ZBTB6-201.alignment counts-znf_b1h_alignment/ZBTB6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB6-201/pos_patterns.ENCSR619OUC_ChIP_ZBTB6_HEK293_ENCSR309MGH_counts_pattern_1.n_410-vs-ZBTB6-201.alignment counts-znf_b1h_alignment/ZBTB6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB6-201/pos_patterns.ENCSR619OUC_ChIP_ZBTB6_HEK293_ENCSR309MGH_counts_pattern_2.n_153-vs-ZBTB6-201.alignment counts-znf_b1h_alignment/ZBTB6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB6-201/pos_patterns.ENCSR619OUC_ChIP_ZBTB6_HEK293_ENCSR309MGH_counts_pattern_3.n_86-vs-ZBTB6-201.alignment counts-znf_b1h_alignment/ZBTB6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR277BXW_ChIP_ZBTB7B_MCF-7_ENCSR025PEB_counts_pattern_0.n_845-vs-ZBTB7B-201.alignment counts-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR277BXW_ChIP_ZBTB7B_MCF-7_ENCSR025PEB_counts_pattern_10.n_41-vs-ZBTB7B-201.alignment counts-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR277BXW_ChIP_ZBTB7B_MCF-7_ENCSR025PEB_counts_pattern_11.n_31-vs-ZBTB7B-201.alignment counts-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR277BXW_ChIP_ZBTB7B_MCF-7_ENCSR025PEB_counts_pattern_12.n_27-vs-ZBTB7B-201.alignment counts-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR277BXW_ChIP_ZBTB7B_MCF-7_ENCSR025PEB_counts_pattern_13.n_22-vs-ZBTB7B-201.alignment counts-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR277BXW_ChIP_ZBTB7B_MCF-7_ENCSR025PEB_counts_pattern_14.n_21-vs-ZBTB7B-201.alignment counts-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR277BXW_ChIP_ZBTB7B_MCF-7_ENCSR025PEB_counts_pattern_1.n_321-vs-ZBTB7B-201.alignment counts-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR277BXW_ChIP_ZBTB7B_MCF-7_ENCSR025PEB_counts_pattern_2.n_221-vs-ZBTB7B-201.alignment counts-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR277BXW_ChIP_ZBTB7B_MCF-7_ENCSR025PEB_counts_pattern_3.n_221-vs-ZBTB7B-201.alignment counts-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR277BXW_ChIP_ZBTB7B_MCF-7_ENCSR025PEB_counts_pattern_4.n_145-vs-ZBTB7B-201.alignment counts-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR277BXW_ChIP_ZBTB7B_MCF-7_ENCSR025PEB_counts_pattern_5.n_92-vs-ZBTB7B-201.alignment counts-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR277BXW_ChIP_ZBTB7B_MCF-7_ENCSR025PEB_counts_pattern_6.n_91-vs-ZBTB7B-201.alignment counts-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR277BXW_ChIP_ZBTB7B_MCF-7_ENCSR025PEB_counts_pattern_7.n_90-vs-ZBTB7B-201.alignment counts-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR277BXW_ChIP_ZBTB7B_MCF-7_ENCSR025PEB_counts_pattern_8.n_71-vs-ZBTB7B-201.alignment counts-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR277BXW_ChIP_ZBTB7B_MCF-7_ENCSR025PEB_counts_pattern_9.n_47-vs-ZBTB7B-201.alignment counts-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR322ULL_ChIP_ZBTB7B_HepG2_ENCSR360FAJ_counts_pattern_0.n_6143-vs-ZBTB7B-201.alignment counts-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR322ULL_ChIP_ZBTB7B_HepG2_ENCSR360FAJ_counts_pattern_10.n_36-vs-ZBTB7B-201.alignment counts-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR322ULL_ChIP_ZBTB7B_HepG2_ENCSR360FAJ_counts_pattern_11.n_32-vs-ZBTB7B-201.alignment counts-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR322ULL_ChIP_ZBTB7B_HepG2_ENCSR360FAJ_counts_pattern_12.n_30-vs-ZBTB7B-201.alignment counts-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR322ULL_ChIP_ZBTB7B_HepG2_ENCSR360FAJ_counts_pattern_1.n_2932-vs-ZBTB7B-201.alignment counts-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR322ULL_ChIP_ZBTB7B_HepG2_ENCSR360FAJ_counts_pattern_2.n_2793-vs-ZBTB7B-201.alignment counts-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR322ULL_ChIP_ZBTB7B_HepG2_ENCSR360FAJ_counts_pattern_3.n_2468-vs-ZBTB7B-201.alignment counts-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR322ULL_ChIP_ZBTB7B_HepG2_ENCSR360FAJ_counts_pattern_4.n_1643-vs-ZBTB7B-201.alignment counts-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR322ULL_ChIP_ZBTB7B_HepG2_ENCSR360FAJ_counts_pattern_5.n_763-vs-ZBTB7B-201.alignment counts-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR322ULL_ChIP_ZBTB7B_HepG2_ENCSR360FAJ_counts_pattern_6.n_632-vs-ZBTB7B-201.alignment counts-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR322ULL_ChIP_ZBTB7B_HepG2_ENCSR360FAJ_counts_pattern_7.n_599-vs-ZBTB7B-201.alignment counts-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR322ULL_ChIP_ZBTB7B_HepG2_ENCSR360FAJ_counts_pattern_8.n_317-vs-ZBTB7B-201.alignment counts-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR322ULL_ChIP_ZBTB7B_HepG2_ENCSR360FAJ_counts_pattern_9.n_69-vs-ZBTB7B-201.alignment counts-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-201/pos_patterns.ENCSR283ZNI_ChIP_ZBTB8A_K562_ENCSR759EBE_counts_pattern_0.n_137-vs-ZBTB8A-201.alignment counts-znf_b1h_alignment/ZBTB8A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-201/pos_patterns.ENCSR283ZNI_ChIP_ZBTB8A_K562_ENCSR759EBE_counts_pattern_1.n_36-vs-ZBTB8A-201.alignment counts-znf_b1h_alignment/ZBTB8A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-201/pos_patterns.ENCSR283ZNI_ChIP_ZBTB8A_K562_ENCSR759EBE_counts_pattern_2.n_32-vs-ZBTB8A-201.alignment counts-znf_b1h_alignment/ZBTB8A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-201/pos_patterns.ENCSR283ZNI_ChIP_ZBTB8A_K562_ENCSR759EBE_counts_pattern_3.n_30-vs-ZBTB8A-201.alignment counts-znf_b1h_alignment/ZBTB8A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-201/pos_patterns.ENCSR283ZNI_ChIP_ZBTB8A_K562_ENCSR759EBE_counts_pattern_4.n_22-vs-ZBTB8A-201.alignment counts-znf_b1h_alignment/ZBTB8A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-201/pos_patterns.ENCSR283ZNI_ChIP_ZBTB8A_K562_ENCSR759EBE_counts_pattern_5.n_20-vs-ZBTB8A-201.alignment counts-znf_b1h_alignment/ZBTB8A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-201/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_0.n_6344-vs-ZBTB8A-201.alignment counts-znf_b1h_alignment/ZBTB8A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-201/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_10.n_305-vs-ZBTB8A-201.alignment counts-znf_b1h_alignment/ZBTB8A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-201/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_11.n_300-vs-ZBTB8A-201.alignment counts-znf_b1h_alignment/ZBTB8A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-201/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_12.n_296-vs-ZBTB8A-201.alignment counts-znf_b1h_alignment/ZBTB8A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-201/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_13.n_281-vs-ZBTB8A-201.alignment counts-znf_b1h_alignment/ZBTB8A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-201/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_14.n_201-vs-ZBTB8A-201.alignment counts-znf_b1h_alignment/ZBTB8A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-201/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_15.n_166-vs-ZBTB8A-201.alignment counts-znf_b1h_alignment/ZBTB8A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-201/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_16.n_161-vs-ZBTB8A-201.alignment counts-znf_b1h_alignment/ZBTB8A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-201/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_17.n_157-vs-ZBTB8A-201.alignment counts-znf_b1h_alignment/ZBTB8A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-201/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_18.n_142-vs-ZBTB8A-201.alignment counts-znf_b1h_alignment/ZBTB8A-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-201/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_1.n_5137-vs-ZBTB8A-201.alignment counts-znf_b1h_alignment/ZBTB8A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-201/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_20.n_111-vs-ZBTB8A-201.alignment counts-znf_b1h_alignment/ZBTB8A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-201/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_21.n_93-vs-ZBTB8A-201.alignment counts-znf_b1h_alignment/ZBTB8A-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-201/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_23.n_61-vs-ZBTB8A-201.alignment counts-znf_b1h_alignment/ZBTB8A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-201/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_24.n_52-vs-ZBTB8A-201.alignment counts-znf_b1h_alignment/ZBTB8A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-201/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_25.n_33-vs-ZBTB8A-201.alignment counts-znf_b1h_alignment/ZBTB8A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-201/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_26.n_28-vs-ZBTB8A-201.alignment counts-znf_b1h_alignment/ZBTB8A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-201/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_2.n_3523-vs-ZBTB8A-201.alignment counts-znf_b1h_alignment/ZBTB8A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-201/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_3.n_1089-vs-ZBTB8A-201.alignment counts-znf_b1h_alignment/ZBTB8A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-201/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_4.n_838-vs-ZBTB8A-201.alignment counts-znf_b1h_alignment/ZBTB8A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-201/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_5.n_677-vs-ZBTB8A-201.alignment counts-znf_b1h_alignment/ZBTB8A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-201/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_6.n_493-vs-ZBTB8A-201.alignment counts-znf_b1h_alignment/ZBTB8A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-201/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_7.n_441-vs-ZBTB8A-201.alignment counts-znf_b1h_alignment/ZBTB8A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-201/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_8.n_439-vs-ZBTB8A-201.alignment counts-znf_b1h_alignment/ZBTB8A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-201/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_9.n_317-vs-ZBTB8A-201.alignment counts-znf_b1h_alignment/ZBTB8A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-201/pos_patterns.ENCSR625XAV_ChIP_ZBTB8A_HepG2_ENCSR893JLL_counts_pattern_0.n_1005-vs-ZBTB8A-201.alignment counts-znf_b1h_alignment/ZBTB8A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-201/pos_patterns.ENCSR625XAV_ChIP_ZBTB8A_HepG2_ENCSR893JLL_counts_pattern_1.n_956-vs-ZBTB8A-201.alignment counts-znf_b1h_alignment/ZBTB8A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-201/pos_patterns.ENCSR625XAV_ChIP_ZBTB8A_HepG2_ENCSR893JLL_counts_pattern_2.n_913-vs-ZBTB8A-201.alignment counts-znf_b1h_alignment/ZBTB8A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-201/pos_patterns.ENCSR625XAV_ChIP_ZBTB8A_HepG2_ENCSR893JLL_counts_pattern_3.n_328-vs-ZBTB8A-201.alignment counts-znf_b1h_alignment/ZBTB8A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-201/pos_patterns.ENCSR625XAV_ChIP_ZBTB8A_HepG2_ENCSR893JLL_counts_pattern_4.n_219-vs-ZBTB8A-201.alignment counts-znf_b1h_alignment/ZBTB8A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-201/pos_patterns.ENCSR625XAV_ChIP_ZBTB8A_HepG2_ENCSR893JLL_counts_pattern_5.n_219-vs-ZBTB8A-201.alignment counts-znf_b1h_alignment/ZBTB8A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-201/pos_patterns.ENCSR625XAV_ChIP_ZBTB8A_HepG2_ENCSR893JLL_counts_pattern_6.n_113-vs-ZBTB8A-201.alignment counts-znf_b1h_alignment/ZBTB8A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-201/pos_patterns.ENCSR625XAV_ChIP_ZBTB8A_HepG2_ENCSR893JLL_counts_pattern_7.n_94-vs-ZBTB8A-201.alignment counts-znf_b1h_alignment/ZBTB8A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-201/pos_patterns.ENCSR625XAV_ChIP_ZBTB8A_HepG2_ENCSR893JLL_counts_pattern_8.n_33-vs-ZBTB8A-201.alignment counts-znf_b1h_alignment/ZBTB8A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-202/pos_patterns.ENCSR283ZNI_ChIP_ZBTB8A_K562_ENCSR759EBE_counts_pattern_0.n_137-vs-ZBTB8A-202.alignment counts-znf_b1h_alignment/ZBTB8A-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-202/pos_patterns.ENCSR283ZNI_ChIP_ZBTB8A_K562_ENCSR759EBE_counts_pattern_1.n_36-vs-ZBTB8A-202.alignment counts-znf_b1h_alignment/ZBTB8A-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-202/pos_patterns.ENCSR283ZNI_ChIP_ZBTB8A_K562_ENCSR759EBE_counts_pattern_2.n_32-vs-ZBTB8A-202.alignment counts-znf_b1h_alignment/ZBTB8A-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-202/pos_patterns.ENCSR283ZNI_ChIP_ZBTB8A_K562_ENCSR759EBE_counts_pattern_3.n_30-vs-ZBTB8A-202.alignment counts-znf_b1h_alignment/ZBTB8A-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-202/pos_patterns.ENCSR283ZNI_ChIP_ZBTB8A_K562_ENCSR759EBE_counts_pattern_4.n_22-vs-ZBTB8A-202.alignment counts-znf_b1h_alignment/ZBTB8A-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-202/pos_patterns.ENCSR283ZNI_ChIP_ZBTB8A_K562_ENCSR759EBE_counts_pattern_5.n_20-vs-ZBTB8A-202.alignment counts-znf_b1h_alignment/ZBTB8A-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-202/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_0.n_6344-vs-ZBTB8A-202.alignment counts-znf_b1h_alignment/ZBTB8A-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-202/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_10.n_305-vs-ZBTB8A-202.alignment counts-znf_b1h_alignment/ZBTB8A-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-202/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_11.n_300-vs-ZBTB8A-202.alignment counts-znf_b1h_alignment/ZBTB8A-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-202/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_12.n_296-vs-ZBTB8A-202.alignment counts-znf_b1h_alignment/ZBTB8A-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-202/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_13.n_281-vs-ZBTB8A-202.alignment counts-znf_b1h_alignment/ZBTB8A-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-202/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_14.n_201-vs-ZBTB8A-202.alignment counts-znf_b1h_alignment/ZBTB8A-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-202/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_15.n_166-vs-ZBTB8A-202.alignment counts-znf_b1h_alignment/ZBTB8A-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-202/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_16.n_161-vs-ZBTB8A-202.alignment counts-znf_b1h_alignment/ZBTB8A-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-202/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_17.n_157-vs-ZBTB8A-202.alignment counts-znf_b1h_alignment/ZBTB8A-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-202/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_18.n_142-vs-ZBTB8A-202.alignment counts-znf_b1h_alignment/ZBTB8A-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-202/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_19.n_137-vs-ZBTB8A-202.alignment counts-znf_b1h_alignment/ZBTB8A-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-202/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_1.n_5137-vs-ZBTB8A-202.alignment counts-znf_b1h_alignment/ZBTB8A-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-202/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_20.n_111-vs-ZBTB8A-202.alignment counts-znf_b1h_alignment/ZBTB8A-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-202/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_21.n_93-vs-ZBTB8A-202.alignment counts-znf_b1h_alignment/ZBTB8A-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-202/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_22.n_75-vs-ZBTB8A-202.alignment counts-znf_b1h_alignment/ZBTB8A-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-202/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_23.n_61-vs-ZBTB8A-202.alignment counts-znf_b1h_alignment/ZBTB8A-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-202/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_24.n_52-vs-ZBTB8A-202.alignment counts-znf_b1h_alignment/ZBTB8A-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-202/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_25.n_33-vs-ZBTB8A-202.alignment counts-znf_b1h_alignment/ZBTB8A-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-202/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_26.n_28-vs-ZBTB8A-202.alignment counts-znf_b1h_alignment/ZBTB8A-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-202/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_2.n_3523-vs-ZBTB8A-202.alignment counts-znf_b1h_alignment/ZBTB8A-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-202/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_3.n_1089-vs-ZBTB8A-202.alignment counts-znf_b1h_alignment/ZBTB8A-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-202/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_4.n_838-vs-ZBTB8A-202.alignment counts-znf_b1h_alignment/ZBTB8A-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-202/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_5.n_677-vs-ZBTB8A-202.alignment counts-znf_b1h_alignment/ZBTB8A-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-202/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_6.n_493-vs-ZBTB8A-202.alignment counts-znf_b1h_alignment/ZBTB8A-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-202/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_7.n_441-vs-ZBTB8A-202.alignment counts-znf_b1h_alignment/ZBTB8A-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-202/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_8.n_439-vs-ZBTB8A-202.alignment counts-znf_b1h_alignment/ZBTB8A-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-202/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_counts_pattern_9.n_317-vs-ZBTB8A-202.alignment counts-znf_b1h_alignment/ZBTB8A-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-202/pos_patterns.ENCSR625XAV_ChIP_ZBTB8A_HepG2_ENCSR893JLL_counts_pattern_0.n_1005-vs-ZBTB8A-202.alignment counts-znf_b1h_alignment/ZBTB8A-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-202/pos_patterns.ENCSR625XAV_ChIP_ZBTB8A_HepG2_ENCSR893JLL_counts_pattern_1.n_956-vs-ZBTB8A-202.alignment counts-znf_b1h_alignment/ZBTB8A-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-202/pos_patterns.ENCSR625XAV_ChIP_ZBTB8A_HepG2_ENCSR893JLL_counts_pattern_2.n_913-vs-ZBTB8A-202.alignment counts-znf_b1h_alignment/ZBTB8A-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-202/pos_patterns.ENCSR625XAV_ChIP_ZBTB8A_HepG2_ENCSR893JLL_counts_pattern_3.n_328-vs-ZBTB8A-202.alignment counts-znf_b1h_alignment/ZBTB8A-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-202/pos_patterns.ENCSR625XAV_ChIP_ZBTB8A_HepG2_ENCSR893JLL_counts_pattern_4.n_219-vs-ZBTB8A-202.alignment counts-znf_b1h_alignment/ZBTB8A-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-202/pos_patterns.ENCSR625XAV_ChIP_ZBTB8A_HepG2_ENCSR893JLL_counts_pattern_5.n_219-vs-ZBTB8A-202.alignment counts-znf_b1h_alignment/ZBTB8A-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-202/pos_patterns.ENCSR625XAV_ChIP_ZBTB8A_HepG2_ENCSR893JLL_counts_pattern_6.n_113-vs-ZBTB8A-202.alignment counts-znf_b1h_alignment/ZBTB8A-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-202/pos_patterns.ENCSR625XAV_ChIP_ZBTB8A_HepG2_ENCSR893JLL_counts_pattern_7.n_94-vs-ZBTB8A-202.alignment counts-znf_b1h_alignment/ZBTB8A-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB8A-202/pos_patterns.ENCSR625XAV_ChIP_ZBTB8A_HepG2_ENCSR893JLL_counts_pattern_8.n_33-vs-ZBTB8A-202.alignment counts-znf_b1h_alignment/ZBTB8A-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB9-201/neg_patterns.ENCSR536CBU_ChIP_ZBTB9_K562_ENCSR374HJH_counts_pattern_0.n_21-vs-ZBTB9-201.alignment counts-znf_b1h_alignment/ZBTB9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB9-201/pos_patterns.ENCSR536CBU_ChIP_ZBTB9_K562_ENCSR374HJH_counts_pattern_0.n_3887-vs-ZBTB9-201.alignment counts-znf_b1h_alignment/ZBTB9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB9-201/pos_patterns.ENCSR536CBU_ChIP_ZBTB9_K562_ENCSR374HJH_counts_pattern_1.n_1443-vs-ZBTB9-201.alignment counts-znf_b1h_alignment/ZBTB9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB9-201/pos_patterns.ENCSR536CBU_ChIP_ZBTB9_K562_ENCSR374HJH_counts_pattern_2.n_816-vs-ZBTB9-201.alignment counts-znf_b1h_alignment/ZBTB9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB9-201/pos_patterns.ENCSR536CBU_ChIP_ZBTB9_K562_ENCSR374HJH_counts_pattern_3.n_426-vs-ZBTB9-201.alignment counts-znf_b1h_alignment/ZBTB9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB9-201/pos_patterns.ENCSR536CBU_ChIP_ZBTB9_K562_ENCSR374HJH_counts_pattern_4.n_158-vs-ZBTB9-201.alignment counts-znf_b1h_alignment/ZBTB9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB9-201/pos_patterns.ENCSR536CBU_ChIP_ZBTB9_K562_ENCSR374HJH_counts_pattern_5.n_84-vs-ZBTB9-201.alignment counts-znf_b1h_alignment/ZBTB9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB9-201/pos_patterns.ENCSR536CBU_ChIP_ZBTB9_K562_ENCSR374HJH_counts_pattern_6.n_64-vs-ZBTB9-201.alignment counts-znf_b1h_alignment/ZBTB9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB9-201/pos_patterns.ENCSR536CBU_ChIP_ZBTB9_K562_ENCSR374HJH_counts_pattern_7.n_61-vs-ZBTB9-201.alignment counts-znf_b1h_alignment/ZBTB9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZBTB9-201/pos_patterns.ENCSR536CBU_ChIP_ZBTB9_K562_ENCSR374HJH_counts_pattern_8.n_55-vs-ZBTB9-201.alignment counts-znf_b1h_alignment/ZBTB9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZC3H8-201/pos_patterns.ENCSR143CEO_ChIP_ZC3H8_K562_ENCSR788NFP_counts_pattern_0.n_527-vs-ZC3H8-201.alignment counts-znf_b1h_alignment/ZC3H8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZC3H8-201/pos_patterns.ENCSR143CEO_ChIP_ZC3H8_K562_ENCSR788NFP_counts_pattern_10.n_25-vs-ZC3H8-201.alignment counts-znf_b1h_alignment/ZC3H8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZC3H8-201/pos_patterns.ENCSR143CEO_ChIP_ZC3H8_K562_ENCSR788NFP_counts_pattern_1.n_280-vs-ZC3H8-201.alignment counts-znf_b1h_alignment/ZC3H8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZC3H8-201/pos_patterns.ENCSR143CEO_ChIP_ZC3H8_K562_ENCSR788NFP_counts_pattern_2.n_93-vs-ZC3H8-201.alignment counts-znf_b1h_alignment/ZC3H8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZC3H8-201/pos_patterns.ENCSR143CEO_ChIP_ZC3H8_K562_ENCSR788NFP_counts_pattern_3.n_88-vs-ZC3H8-201.alignment counts-znf_b1h_alignment/ZC3H8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZC3H8-201/pos_patterns.ENCSR143CEO_ChIP_ZC3H8_K562_ENCSR788NFP_counts_pattern_4.n_77-vs-ZC3H8-201.alignment counts-znf_b1h_alignment/ZC3H8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZC3H8-201/pos_patterns.ENCSR143CEO_ChIP_ZC3H8_K562_ENCSR788NFP_counts_pattern_5.n_73-vs-ZC3H8-201.alignment counts-znf_b1h_alignment/ZC3H8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZC3H8-201/pos_patterns.ENCSR143CEO_ChIP_ZC3H8_K562_ENCSR788NFP_counts_pattern_6.n_55-vs-ZC3H8-201.alignment counts-znf_b1h_alignment/ZC3H8-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZC3H8-201/pos_patterns.ENCSR143CEO_ChIP_ZC3H8_K562_ENCSR788NFP_counts_pattern_8.n_42-vs-ZC3H8-201.alignment counts-znf_b1h_alignment/ZC3H8-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB1-201/pos_patterns.ENCSR909HMT_ChIP_ZEB1_HEK293_ENCSR424NLV_counts_pattern_3.n_431-vs-ZEB1-201.alignment counts-znf_b1h_alignment/ZEB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB1-201/pos_patterns.ENCSR909HMT_ChIP_ZEB1_HEK293_ENCSR424NLV_counts_pattern_4.n_245-vs-ZEB1-201.alignment counts-znf_b1h_alignment/ZEB1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB1-201/pos_patterns.ENCSR909HMT_ChIP_ZEB1_HEK293_ENCSR424NLV_counts_pattern_6.n_185-vs-ZEB1-201.alignment counts-znf_b1h_alignment/ZEB1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB1-201/pos_patterns.ENCSR909HMT_ChIP_ZEB1_HEK293_ENCSR424NLV_counts_pattern_9.n_103-vs-ZEB1-201.alignment counts-znf_b1h_alignment/ZEB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB1-206/pos_patterns.ENCSR000BND_ChIP_ZEB1_GM12878_ENCSR759DXD_counts_pattern_0.n_4593-vs-ZEB1-206.alignment counts-znf_b1h_alignment/ZEB1-206/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB1-206/pos_patterns.ENCSR000BND_ChIP_ZEB1_GM12878_ENCSR759DXD_counts_pattern_3.n_96-vs-ZEB1-206.alignment counts-znf_b1h_alignment/ZEB1-206/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB1-206/pos_patterns.ENCSR000BND_ChIP_ZEB1_GM12878_ENCSR759DXD_counts_pattern_7.n_71-vs-ZEB1-206.alignment counts-znf_b1h_alignment/ZEB1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB1-206/pos_patterns.ENCSR000BND_ChIP_ZEB1_GM12878_ENCSR759DXD_counts_pattern_8.n_69-vs-ZEB1-206.alignment counts-znf_b1h_alignment/ZEB1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB1-206/pos_patterns.ENCSR000BND_ChIP_ZEB1_GM12878_ENCSR759DXD_counts_pattern_9.n_66-vs-ZEB1-206.alignment counts-znf_b1h_alignment/ZEB1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB1-206/pos_patterns.ENCSR000BVN_ChIP_ZEB1_HepG2_ENCSR864UBB_counts_pattern_0.n_7455-vs-ZEB1-206.alignment counts-znf_b1h_alignment/ZEB1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB1-206/pos_patterns.ENCSR000BVN_ChIP_ZEB1_HepG2_ENCSR864UBB_counts_pattern_10.n_21-vs-ZEB1-206.alignment counts-znf_b1h_alignment/ZEB1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB1-206/pos_patterns.ENCSR000BVN_ChIP_ZEB1_HepG2_ENCSR864UBB_counts_pattern_1.n_1762-vs-ZEB1-206.alignment counts-znf_b1h_alignment/ZEB1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB1-206/pos_patterns.ENCSR000BVN_ChIP_ZEB1_HepG2_ENCSR864UBB_counts_pattern_2.n_1063-vs-ZEB1-206.alignment counts-znf_b1h_alignment/ZEB1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB1-206/pos_patterns.ENCSR000BVN_ChIP_ZEB1_HepG2_ENCSR864UBB_counts_pattern_3.n_616-vs-ZEB1-206.alignment counts-znf_b1h_alignment/ZEB1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB1-206/pos_patterns.ENCSR000BVN_ChIP_ZEB1_HepG2_ENCSR864UBB_counts_pattern_4.n_395-vs-ZEB1-206.alignment counts-znf_b1h_alignment/ZEB1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB1-206/pos_patterns.ENCSR000BVN_ChIP_ZEB1_HepG2_ENCSR864UBB_counts_pattern_5.n_373-vs-ZEB1-206.alignment counts-znf_b1h_alignment/ZEB1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB1-206/pos_patterns.ENCSR000BVN_ChIP_ZEB1_HepG2_ENCSR864UBB_counts_pattern_6.n_152-vs-ZEB1-206.alignment counts-znf_b1h_alignment/ZEB1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB1-206/pos_patterns.ENCSR000BVN_ChIP_ZEB1_HepG2_ENCSR864UBB_counts_pattern_7.n_44-vs-ZEB1-206.alignment counts-znf_b1h_alignment/ZEB1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB1-206/pos_patterns.ENCSR000BVN_ChIP_ZEB1_HepG2_ENCSR864UBB_counts_pattern_8.n_39-vs-ZEB1-206.alignment counts-znf_b1h_alignment/ZEB1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB1-206/pos_patterns.ENCSR000BVN_ChIP_ZEB1_HepG2_ENCSR864UBB_counts_pattern_9.n_35-vs-ZEB1-206.alignment counts-znf_b1h_alignment/ZEB1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB1-206/pos_patterns.ENCSR418KUS_ChIP_ZEB1_bipolar-neuron_ENCSR167ATD_counts_pattern_0.n_3098-vs-ZEB1-206.alignment counts-znf_b1h_alignment/ZEB1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB1-206/pos_patterns.ENCSR418KUS_ChIP_ZEB1_bipolar-neuron_ENCSR167ATD_counts_pattern_10.n_48-vs-ZEB1-206.alignment counts-znf_b1h_alignment/ZEB1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB1-206/pos_patterns.ENCSR418KUS_ChIP_ZEB1_bipolar-neuron_ENCSR167ATD_counts_pattern_11.n_44-vs-ZEB1-206.alignment counts-znf_b1h_alignment/ZEB1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB1-206/pos_patterns.ENCSR418KUS_ChIP_ZEB1_bipolar-neuron_ENCSR167ATD_counts_pattern_12.n_35-vs-ZEB1-206.alignment counts-znf_b1h_alignment/ZEB1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB1-206/pos_patterns.ENCSR418KUS_ChIP_ZEB1_bipolar-neuron_ENCSR167ATD_counts_pattern_13.n_35-vs-ZEB1-206.alignment counts-znf_b1h_alignment/ZEB1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB1-206/pos_patterns.ENCSR418KUS_ChIP_ZEB1_bipolar-neuron_ENCSR167ATD_counts_pattern_14.n_35-vs-ZEB1-206.alignment counts-znf_b1h_alignment/ZEB1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB1-206/pos_patterns.ENCSR418KUS_ChIP_ZEB1_bipolar-neuron_ENCSR167ATD_counts_pattern_15.n_34-vs-ZEB1-206.alignment counts-znf_b1h_alignment/ZEB1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB1-206/pos_patterns.ENCSR418KUS_ChIP_ZEB1_bipolar-neuron_ENCSR167ATD_counts_pattern_16.n_33-vs-ZEB1-206.alignment counts-znf_b1h_alignment/ZEB1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB1-206/pos_patterns.ENCSR418KUS_ChIP_ZEB1_bipolar-neuron_ENCSR167ATD_counts_pattern_1.n_151-vs-ZEB1-206.alignment counts-znf_b1h_alignment/ZEB1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB1-206/pos_patterns.ENCSR418KUS_ChIP_ZEB1_bipolar-neuron_ENCSR167ATD_counts_pattern_2.n_120-vs-ZEB1-206.alignment counts-znf_b1h_alignment/ZEB1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB1-206/pos_patterns.ENCSR418KUS_ChIP_ZEB1_bipolar-neuron_ENCSR167ATD_counts_pattern_3.n_114-vs-ZEB1-206.alignment counts-znf_b1h_alignment/ZEB1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB1-206/pos_patterns.ENCSR418KUS_ChIP_ZEB1_bipolar-neuron_ENCSR167ATD_counts_pattern_4.n_103-vs-ZEB1-206.alignment counts-znf_b1h_alignment/ZEB1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB1-206/pos_patterns.ENCSR418KUS_ChIP_ZEB1_bipolar-neuron_ENCSR167ATD_counts_pattern_5.n_92-vs-ZEB1-206.alignment counts-znf_b1h_alignment/ZEB1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB1-206/pos_patterns.ENCSR418KUS_ChIP_ZEB1_bipolar-neuron_ENCSR167ATD_counts_pattern_6.n_85-vs-ZEB1-206.alignment counts-znf_b1h_alignment/ZEB1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB1-206/pos_patterns.ENCSR418KUS_ChIP_ZEB1_bipolar-neuron_ENCSR167ATD_counts_pattern_7.n_66-vs-ZEB1-206.alignment counts-znf_b1h_alignment/ZEB1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB1-206/pos_patterns.ENCSR418KUS_ChIP_ZEB1_bipolar-neuron_ENCSR167ATD_counts_pattern_8.n_59-vs-ZEB1-206.alignment counts-znf_b1h_alignment/ZEB1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB1-206/pos_patterns.ENCSR418KUS_ChIP_ZEB1_bipolar-neuron_ENCSR167ATD_counts_pattern_9.n_53-vs-ZEB1-206.alignment counts-znf_b1h_alignment/ZEB1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB1-206/pos_patterns.ENCSR909HMT_ChIP_ZEB1_HEK293_ENCSR424NLV_counts_pattern_0.n_2301-vs-ZEB1-206.alignment counts-znf_b1h_alignment/ZEB1-206/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB1-206/pos_patterns.ENCSR909HMT_ChIP_ZEB1_HEK293_ENCSR424NLV_counts_pattern_11.n_93-vs-ZEB1-206.alignment counts-znf_b1h_alignment/ZEB1-206/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-201/pos_patterns.ENCSR322CFO_ChIP_ZEB2_K562_ENCSR981GUY_counts_pattern_3.n_249-vs-ZEB2-201.alignment counts-znf_b1h_alignment/ZEB2-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-201/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_17.n_168-vs-ZEB2-201.alignment counts-znf_b1h_alignment/ZEB2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-201/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_18.n_124-vs-ZEB2-201.alignment counts-znf_b1h_alignment/ZEB2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-201/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_19.n_120-vs-ZEB2-201.alignment counts-znf_b1h_alignment/ZEB2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-201/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_1.n_3222-vs-ZEB2-201.alignment counts-znf_b1h_alignment/ZEB2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-201/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_20.n_114-vs-ZEB2-201.alignment counts-znf_b1h_alignment/ZEB2-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-201/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_2.n_2985-vs-ZEB2-201.alignment counts-znf_b1h_alignment/ZEB2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-201/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_3.n_1873-vs-ZEB2-201.alignment counts-znf_b1h_alignment/ZEB2-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-201/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_6.n_688-vs-ZEB2-201.alignment counts-znf_b1h_alignment/ZEB2-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-201/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_9.n_387-vs-ZEB2-201.alignment counts-znf_b1h_alignment/ZEB2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR004GKA_ChIP_ZEB2_K562_ENCSR131HUW_counts_pattern_0.n_9743-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR004GKA_ChIP_ZEB2_K562_ENCSR131HUW_counts_pattern_1.n_4972-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR004GKA_ChIP_ZEB2_K562_ENCSR131HUW_counts_pattern_2.n_3787-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR004GKA_ChIP_ZEB2_K562_ENCSR131HUW_counts_pattern_3.n_1522-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR004GKA_ChIP_ZEB2_K562_ENCSR131HUW_counts_pattern_4.n_472-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR004GKA_ChIP_ZEB2_K562_ENCSR131HUW_counts_pattern_5.n_182-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR004GKA_ChIP_ZEB2_K562_ENCSR131HUW_counts_pattern_6.n_178-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR004GKA_ChIP_ZEB2_K562_ENCSR131HUW_counts_pattern_7.n_176-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR004GKA_ChIP_ZEB2_K562_ENCSR131HUW_counts_pattern_8.n_91-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR004GKA_ChIP_ZEB2_K562_ENCSR131HUW_counts_pattern_9.n_85-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR322CFO_ChIP_ZEB2_K562_ENCSR981GUY_counts_pattern_0.n_7255-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR322CFO_ChIP_ZEB2_K562_ENCSR981GUY_counts_pattern_10.n_63-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR322CFO_ChIP_ZEB2_K562_ENCSR981GUY_counts_pattern_11.n_41-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR322CFO_ChIP_ZEB2_K562_ENCSR981GUY_counts_pattern_12.n_33-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR322CFO_ChIP_ZEB2_K562_ENCSR981GUY_counts_pattern_13.n_33-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR322CFO_ChIP_ZEB2_K562_ENCSR981GUY_counts_pattern_14.n_20-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR322CFO_ChIP_ZEB2_K562_ENCSR981GUY_counts_pattern_1.n_2860-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR322CFO_ChIP_ZEB2_K562_ENCSR981GUY_counts_pattern_2.n_2332-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR322CFO_ChIP_ZEB2_K562_ENCSR981GUY_counts_pattern_3.n_249-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR322CFO_ChIP_ZEB2_K562_ENCSR981GUY_counts_pattern_4.n_143-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR322CFO_ChIP_ZEB2_K562_ENCSR981GUY_counts_pattern_5.n_138-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR322CFO_ChIP_ZEB2_K562_ENCSR981GUY_counts_pattern_6.n_111-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR322CFO_ChIP_ZEB2_K562_ENCSR981GUY_counts_pattern_7.n_97-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR322CFO_ChIP_ZEB2_K562_ENCSR981GUY_counts_pattern_8.n_87-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR322CFO_ChIP_ZEB2_K562_ENCSR981GUY_counts_pattern_9.n_63-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_0.n_5498-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_10.n_363-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_11.n_336-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_12.n_272-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_13.n_231-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_14.n_220-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_15.n_187-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_16.n_185-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_17.n_168-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_18.n_124-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_19.n_120-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_1.n_3222-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_20.n_114-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_21.n_78-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_22.n_76-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_23.n_75-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_24.n_65-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_25.n_61-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_26.n_45-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_27.n_37-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_2.n_2985-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_3.n_1873-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_4.n_1286-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_5.n_728-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_6.n_688-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_7.n_631-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_8.n_522-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-246/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_9.n_387-vs-ZEB2-246.alignment counts-znf_b1h_alignment/ZEB2-246/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR004GKA_ChIP_ZEB2_K562_ENCSR131HUW_counts_pattern_0.n_9743-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR004GKA_ChIP_ZEB2_K562_ENCSR131HUW_counts_pattern_10.n_40-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR004GKA_ChIP_ZEB2_K562_ENCSR131HUW_counts_pattern_11.n_25-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR004GKA_ChIP_ZEB2_K562_ENCSR131HUW_counts_pattern_1.n_4972-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR004GKA_ChIP_ZEB2_K562_ENCSR131HUW_counts_pattern_2.n_3787-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR004GKA_ChIP_ZEB2_K562_ENCSR131HUW_counts_pattern_3.n_1522-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR004GKA_ChIP_ZEB2_K562_ENCSR131HUW_counts_pattern_4.n_472-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR004GKA_ChIP_ZEB2_K562_ENCSR131HUW_counts_pattern_5.n_182-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR004GKA_ChIP_ZEB2_K562_ENCSR131HUW_counts_pattern_6.n_178-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR004GKA_ChIP_ZEB2_K562_ENCSR131HUW_counts_pattern_7.n_176-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR004GKA_ChIP_ZEB2_K562_ENCSR131HUW_counts_pattern_8.n_91-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR004GKA_ChIP_ZEB2_K562_ENCSR131HUW_counts_pattern_9.n_85-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR322CFO_ChIP_ZEB2_K562_ENCSR981GUY_counts_pattern_0.n_7255-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR322CFO_ChIP_ZEB2_K562_ENCSR981GUY_counts_pattern_10.n_63-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR322CFO_ChIP_ZEB2_K562_ENCSR981GUY_counts_pattern_11.n_41-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR322CFO_ChIP_ZEB2_K562_ENCSR981GUY_counts_pattern_12.n_33-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR322CFO_ChIP_ZEB2_K562_ENCSR981GUY_counts_pattern_13.n_33-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR322CFO_ChIP_ZEB2_K562_ENCSR981GUY_counts_pattern_14.n_20-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR322CFO_ChIP_ZEB2_K562_ENCSR981GUY_counts_pattern_1.n_2860-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR322CFO_ChIP_ZEB2_K562_ENCSR981GUY_counts_pattern_2.n_2332-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR322CFO_ChIP_ZEB2_K562_ENCSR981GUY_counts_pattern_3.n_249-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR322CFO_ChIP_ZEB2_K562_ENCSR981GUY_counts_pattern_4.n_143-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR322CFO_ChIP_ZEB2_K562_ENCSR981GUY_counts_pattern_5.n_138-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR322CFO_ChIP_ZEB2_K562_ENCSR981GUY_counts_pattern_6.n_111-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR322CFO_ChIP_ZEB2_K562_ENCSR981GUY_counts_pattern_7.n_97-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR322CFO_ChIP_ZEB2_K562_ENCSR981GUY_counts_pattern_8.n_87-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR322CFO_ChIP_ZEB2_K562_ENCSR981GUY_counts_pattern_9.n_63-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_0.n_5498-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_10.n_363-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_11.n_336-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_12.n_272-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_13.n_231-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_14.n_220-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_15.n_187-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_16.n_185-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_17.n_168-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_18.n_124-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_19.n_120-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_1.n_3222-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_20.n_114-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_21.n_78-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_22.n_76-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_23.n_75-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_24.n_65-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_25.n_61-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_26.n_45-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_27.n_37-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_2.n_2985-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_3.n_1873-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_4.n_1286-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_5.n_728-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_6.n_688-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_7.n_631-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_8.n_522-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZEB2-248/pos_patterns.ENCSR417VWF_ChIP_ZEB2_HEK293_ENCSR320EEO_counts_pattern_9.n_387-vs-ZEB2-248.alignment counts-znf_b1h_alignment/ZEB2-248/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFAT-201/pos_patterns.ENCSR409DYM_ChIP_ZFAT_HepG2_ENCSR616OXL_counts_pattern_0.n_600-vs-ZFAT-201.alignment counts-znf_b1h_alignment/ZFAT-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFAT-201/pos_patterns.ENCSR409DYM_ChIP_ZFAT_HepG2_ENCSR616OXL_counts_pattern_1.n_509-vs-ZFAT-201.alignment counts-znf_b1h_alignment/ZFAT-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFAT-201/pos_patterns.ENCSR409DYM_ChIP_ZFAT_HepG2_ENCSR616OXL_counts_pattern_2.n_223-vs-ZFAT-201.alignment counts-znf_b1h_alignment/ZFAT-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFAT-201/pos_patterns.ENCSR409DYM_ChIP_ZFAT_HepG2_ENCSR616OXL_counts_pattern_3.n_212-vs-ZFAT-201.alignment counts-znf_b1h_alignment/ZFAT-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFAT-201/pos_patterns.ENCSR409DYM_ChIP_ZFAT_HepG2_ENCSR616OXL_counts_pattern_4.n_164-vs-ZFAT-201.alignment counts-znf_b1h_alignment/ZFAT-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFAT-201/pos_patterns.ENCSR409DYM_ChIP_ZFAT_HepG2_ENCSR616OXL_counts_pattern_5.n_146-vs-ZFAT-201.alignment counts-znf_b1h_alignment/ZFAT-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFAT-201/pos_patterns.ENCSR409DYM_ChIP_ZFAT_HepG2_ENCSR616OXL_counts_pattern_6.n_123-vs-ZFAT-201.alignment counts-znf_b1h_alignment/ZFAT-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFAT-201/pos_patterns.ENCSR409DYM_ChIP_ZFAT_HepG2_ENCSR616OXL_counts_pattern_7.n_45-vs-ZFAT-201.alignment counts-znf_b1h_alignment/ZFAT-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFAT-201/pos_patterns.ENCSR409DYM_ChIP_ZFAT_HepG2_ENCSR616OXL_counts_pattern_8.n_43-vs-ZFAT-201.alignment counts-znf_b1h_alignment/ZFAT-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFAT-213/pos_patterns.ENCSR409DYM_ChIP_ZFAT_HepG2_ENCSR616OXL_counts_pattern_0.n_600-vs-ZFAT-213.alignment counts-znf_b1h_alignment/ZFAT-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFAT-213/pos_patterns.ENCSR409DYM_ChIP_ZFAT_HepG2_ENCSR616OXL_counts_pattern_1.n_509-vs-ZFAT-213.alignment counts-znf_b1h_alignment/ZFAT-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFAT-213/pos_patterns.ENCSR409DYM_ChIP_ZFAT_HepG2_ENCSR616OXL_counts_pattern_2.n_223-vs-ZFAT-213.alignment counts-znf_b1h_alignment/ZFAT-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFAT-213/pos_patterns.ENCSR409DYM_ChIP_ZFAT_HepG2_ENCSR616OXL_counts_pattern_3.n_212-vs-ZFAT-213.alignment counts-znf_b1h_alignment/ZFAT-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFAT-213/pos_patterns.ENCSR409DYM_ChIP_ZFAT_HepG2_ENCSR616OXL_counts_pattern_4.n_164-vs-ZFAT-213.alignment counts-znf_b1h_alignment/ZFAT-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFAT-213/pos_patterns.ENCSR409DYM_ChIP_ZFAT_HepG2_ENCSR616OXL_counts_pattern_5.n_146-vs-ZFAT-213.alignment counts-znf_b1h_alignment/ZFAT-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFAT-213/pos_patterns.ENCSR409DYM_ChIP_ZFAT_HepG2_ENCSR616OXL_counts_pattern_6.n_123-vs-ZFAT-213.alignment counts-znf_b1h_alignment/ZFAT-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFAT-213/pos_patterns.ENCSR409DYM_ChIP_ZFAT_HepG2_ENCSR616OXL_counts_pattern_7.n_45-vs-ZFAT-213.alignment counts-znf_b1h_alignment/ZFAT-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFAT-213/pos_patterns.ENCSR409DYM_ChIP_ZFAT_HepG2_ENCSR616OXL_counts_pattern_8.n_43-vs-ZFAT-213.alignment counts-znf_b1h_alignment/ZFAT-213/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFAT-215/pos_patterns.ENCSR409DYM_ChIP_ZFAT_HepG2_ENCSR616OXL_counts_pattern_0.n_600-vs-ZFAT-215.alignment counts-znf_b1h_alignment/ZFAT-215/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFAT-215/pos_patterns.ENCSR409DYM_ChIP_ZFAT_HepG2_ENCSR616OXL_counts_pattern_1.n_509-vs-ZFAT-215.alignment counts-znf_b1h_alignment/ZFAT-215/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFAT-215/pos_patterns.ENCSR409DYM_ChIP_ZFAT_HepG2_ENCSR616OXL_counts_pattern_2.n_223-vs-ZFAT-215.alignment counts-znf_b1h_alignment/ZFAT-215/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFAT-215/pos_patterns.ENCSR409DYM_ChIP_ZFAT_HepG2_ENCSR616OXL_counts_pattern_3.n_212-vs-ZFAT-215.alignment counts-znf_b1h_alignment/ZFAT-215/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFAT-215/pos_patterns.ENCSR409DYM_ChIP_ZFAT_HepG2_ENCSR616OXL_counts_pattern_4.n_164-vs-ZFAT-215.alignment counts-znf_b1h_alignment/ZFAT-215/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFAT-215/pos_patterns.ENCSR409DYM_ChIP_ZFAT_HepG2_ENCSR616OXL_counts_pattern_5.n_146-vs-ZFAT-215.alignment counts-znf_b1h_alignment/ZFAT-215/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFAT-215/pos_patterns.ENCSR409DYM_ChIP_ZFAT_HepG2_ENCSR616OXL_counts_pattern_6.n_123-vs-ZFAT-215.alignment counts-znf_b1h_alignment/ZFAT-215/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFAT-215/pos_patterns.ENCSR409DYM_ChIP_ZFAT_HepG2_ENCSR616OXL_counts_pattern_7.n_45-vs-ZFAT-215.alignment counts-znf_b1h_alignment/ZFAT-215/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFAT-215/pos_patterns.ENCSR409DYM_ChIP_ZFAT_HepG2_ENCSR616OXL_counts_pattern_8.n_43-vs-ZFAT-215.alignment counts-znf_b1h_alignment/ZFAT-215/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFAT-216/pos_patterns.ENCSR409DYM_ChIP_ZFAT_HepG2_ENCSR616OXL_counts_pattern_0.n_600-vs-ZFAT-216.alignment counts-znf_b1h_alignment/ZFAT-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFAT-216/pos_patterns.ENCSR409DYM_ChIP_ZFAT_HepG2_ENCSR616OXL_counts_pattern_1.n_509-vs-ZFAT-216.alignment counts-znf_b1h_alignment/ZFAT-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFAT-216/pos_patterns.ENCSR409DYM_ChIP_ZFAT_HepG2_ENCSR616OXL_counts_pattern_2.n_223-vs-ZFAT-216.alignment counts-znf_b1h_alignment/ZFAT-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFAT-216/pos_patterns.ENCSR409DYM_ChIP_ZFAT_HepG2_ENCSR616OXL_counts_pattern_3.n_212-vs-ZFAT-216.alignment counts-znf_b1h_alignment/ZFAT-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFAT-216/pos_patterns.ENCSR409DYM_ChIP_ZFAT_HepG2_ENCSR616OXL_counts_pattern_4.n_164-vs-ZFAT-216.alignment counts-znf_b1h_alignment/ZFAT-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFAT-216/pos_patterns.ENCSR409DYM_ChIP_ZFAT_HepG2_ENCSR616OXL_counts_pattern_5.n_146-vs-ZFAT-216.alignment counts-znf_b1h_alignment/ZFAT-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFAT-216/pos_patterns.ENCSR409DYM_ChIP_ZFAT_HepG2_ENCSR616OXL_counts_pattern_6.n_123-vs-ZFAT-216.alignment counts-znf_b1h_alignment/ZFAT-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFAT-216/pos_patterns.ENCSR409DYM_ChIP_ZFAT_HepG2_ENCSR616OXL_counts_pattern_7.n_45-vs-ZFAT-216.alignment counts-znf_b1h_alignment/ZFAT-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFAT-216/pos_patterns.ENCSR409DYM_ChIP_ZFAT_HepG2_ENCSR616OXL_counts_pattern_8.n_43-vs-ZFAT-216.alignment counts-znf_b1h_alignment/ZFAT-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFHX2-202/pos_patterns.ENCSR632SIM_ChIP_ZFHX2_HEK293_ENCSR547QPI_counts_pattern_0.n_15374-vs-ZFHX2-202.alignment counts-znf_b1h_alignment/ZFHX2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFHX2-202/pos_patterns.ENCSR632SIM_ChIP_ZFHX2_HEK293_ENCSR547QPI_counts_pattern_10.n_204-vs-ZFHX2-202.alignment counts-znf_b1h_alignment/ZFHX2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFHX2-202/pos_patterns.ENCSR632SIM_ChIP_ZFHX2_HEK293_ENCSR547QPI_counts_pattern_11.n_89-vs-ZFHX2-202.alignment counts-znf_b1h_alignment/ZFHX2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFHX2-202/pos_patterns.ENCSR632SIM_ChIP_ZFHX2_HEK293_ENCSR547QPI_counts_pattern_12.n_73-vs-ZFHX2-202.alignment counts-znf_b1h_alignment/ZFHX2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFHX2-202/pos_patterns.ENCSR632SIM_ChIP_ZFHX2_HEK293_ENCSR547QPI_counts_pattern_13.n_65-vs-ZFHX2-202.alignment counts-znf_b1h_alignment/ZFHX2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFHX2-202/pos_patterns.ENCSR632SIM_ChIP_ZFHX2_HEK293_ENCSR547QPI_counts_pattern_14.n_63-vs-ZFHX2-202.alignment counts-znf_b1h_alignment/ZFHX2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFHX2-202/pos_patterns.ENCSR632SIM_ChIP_ZFHX2_HEK293_ENCSR547QPI_counts_pattern_15.n_38-vs-ZFHX2-202.alignment counts-znf_b1h_alignment/ZFHX2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFHX2-202/pos_patterns.ENCSR632SIM_ChIP_ZFHX2_HEK293_ENCSR547QPI_counts_pattern_16.n_21-vs-ZFHX2-202.alignment counts-znf_b1h_alignment/ZFHX2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFHX2-202/pos_patterns.ENCSR632SIM_ChIP_ZFHX2_HEK293_ENCSR547QPI_counts_pattern_1.n_769-vs-ZFHX2-202.alignment counts-znf_b1h_alignment/ZFHX2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFHX2-202/pos_patterns.ENCSR632SIM_ChIP_ZFHX2_HEK293_ENCSR547QPI_counts_pattern_2.n_546-vs-ZFHX2-202.alignment counts-znf_b1h_alignment/ZFHX2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFHX2-202/pos_patterns.ENCSR632SIM_ChIP_ZFHX2_HEK293_ENCSR547QPI_counts_pattern_3.n_486-vs-ZFHX2-202.alignment counts-znf_b1h_alignment/ZFHX2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFHX2-202/pos_patterns.ENCSR632SIM_ChIP_ZFHX2_HEK293_ENCSR547QPI_counts_pattern_4.n_397-vs-ZFHX2-202.alignment counts-znf_b1h_alignment/ZFHX2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFHX2-202/pos_patterns.ENCSR632SIM_ChIP_ZFHX2_HEK293_ENCSR547QPI_counts_pattern_5.n_363-vs-ZFHX2-202.alignment counts-znf_b1h_alignment/ZFHX2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFHX2-202/pos_patterns.ENCSR632SIM_ChIP_ZFHX2_HEK293_ENCSR547QPI_counts_pattern_6.n_346-vs-ZFHX2-202.alignment counts-znf_b1h_alignment/ZFHX2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFHX2-202/pos_patterns.ENCSR632SIM_ChIP_ZFHX2_HEK293_ENCSR547QPI_counts_pattern_7.n_236-vs-ZFHX2-202.alignment counts-znf_b1h_alignment/ZFHX2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFHX2-202/pos_patterns.ENCSR632SIM_ChIP_ZFHX2_HEK293_ENCSR547QPI_counts_pattern_8.n_230-vs-ZFHX2-202.alignment counts-znf_b1h_alignment/ZFHX2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFHX2-202/pos_patterns.ENCSR632SIM_ChIP_ZFHX2_HEK293_ENCSR547QPI_counts_pattern_9.n_224-vs-ZFHX2-202.alignment counts-znf_b1h_alignment/ZFHX2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFHX3-201/pos_patterns.ENCSR879RGN_ChIP_ZFHX3_HepG2_ENCSR339CDB_counts_pattern_0.n_1823-vs-ZFHX3-201.alignment counts-znf_b1h_alignment/ZFHX3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFHX3-201/pos_patterns.ENCSR879RGN_ChIP_ZFHX3_HepG2_ENCSR339CDB_counts_pattern_1.n_1788-vs-ZFHX3-201.alignment counts-znf_b1h_alignment/ZFHX3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFHX3-201/pos_patterns.ENCSR879RGN_ChIP_ZFHX3_HepG2_ENCSR339CDB_counts_pattern_2.n_1221-vs-ZFHX3-201.alignment counts-znf_b1h_alignment/ZFHX3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFHX3-201/pos_patterns.ENCSR879RGN_ChIP_ZFHX3_HepG2_ENCSR339CDB_counts_pattern_3.n_1215-vs-ZFHX3-201.alignment counts-znf_b1h_alignment/ZFHX3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFHX3-201/pos_patterns.ENCSR879RGN_ChIP_ZFHX3_HepG2_ENCSR339CDB_counts_pattern_4.n_1110-vs-ZFHX3-201.alignment counts-znf_b1h_alignment/ZFHX3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFHX3-201/pos_patterns.ENCSR879RGN_ChIP_ZFHX3_HepG2_ENCSR339CDB_counts_pattern_5.n_169-vs-ZFHX3-201.alignment counts-znf_b1h_alignment/ZFHX3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFHX3-201/pos_patterns.ENCSR879RGN_ChIP_ZFHX3_HepG2_ENCSR339CDB_counts_pattern_6.n_60-vs-ZFHX3-201.alignment counts-znf_b1h_alignment/ZFHX3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFHX3-203/pos_patterns.ENCSR879RGN_ChIP_ZFHX3_HepG2_ENCSR339CDB_counts_pattern_0.n_1823-vs-ZFHX3-203.alignment counts-znf_b1h_alignment/ZFHX3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFHX3-203/pos_patterns.ENCSR879RGN_ChIP_ZFHX3_HepG2_ENCSR339CDB_counts_pattern_1.n_1788-vs-ZFHX3-203.alignment counts-znf_b1h_alignment/ZFHX3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFHX3-203/pos_patterns.ENCSR879RGN_ChIP_ZFHX3_HepG2_ENCSR339CDB_counts_pattern_2.n_1221-vs-ZFHX3-203.alignment counts-znf_b1h_alignment/ZFHX3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFHX3-203/pos_patterns.ENCSR879RGN_ChIP_ZFHX3_HepG2_ENCSR339CDB_counts_pattern_3.n_1215-vs-ZFHX3-203.alignment counts-znf_b1h_alignment/ZFHX3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFHX3-203/pos_patterns.ENCSR879RGN_ChIP_ZFHX3_HepG2_ENCSR339CDB_counts_pattern_4.n_1110-vs-ZFHX3-203.alignment counts-znf_b1h_alignment/ZFHX3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFHX3-203/pos_patterns.ENCSR879RGN_ChIP_ZFHX3_HepG2_ENCSR339CDB_counts_pattern_5.n_169-vs-ZFHX3-203.alignment counts-znf_b1h_alignment/ZFHX3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFHX3-203/pos_patterns.ENCSR879RGN_ChIP_ZFHX3_HepG2_ENCSR339CDB_counts_pattern_6.n_60-vs-ZFHX3-203.alignment counts-znf_b1h_alignment/ZFHX3-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP1-201/ChipExo_models_ZFP1_counts-pos.pattern_0.n_134-vs-ZFP1-201.alignment counts-znf_b1h_alignment/ZFP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP1-201/pos_patterns.ENCSR586DEH_ChIP_ZFP1_HepG2_ENCSR556WFV_counts_pattern_0.n_2361-vs-ZFP1-201.alignment counts-znf_b1h_alignment/ZFP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP1-201/pos_patterns.ENCSR586DEH_ChIP_ZFP1_HepG2_ENCSR556WFV_counts_pattern_1.n_1714-vs-ZFP1-201.alignment counts-znf_b1h_alignment/ZFP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP1-201/pos_patterns.ENCSR586DEH_ChIP_ZFP1_HepG2_ENCSR556WFV_counts_pattern_2.n_1447-vs-ZFP1-201.alignment counts-znf_b1h_alignment/ZFP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP1-201/pos_patterns.ENCSR586DEH_ChIP_ZFP1_HepG2_ENCSR556WFV_counts_pattern_3.n_859-vs-ZFP1-201.alignment counts-znf_b1h_alignment/ZFP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP1-201/pos_patterns.ENCSR586DEH_ChIP_ZFP1_HepG2_ENCSR556WFV_counts_pattern_4.n_693-vs-ZFP1-201.alignment counts-znf_b1h_alignment/ZFP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP1-201/pos_patterns.ENCSR586DEH_ChIP_ZFP1_HepG2_ENCSR556WFV_counts_pattern_5.n_187-vs-ZFP1-201.alignment counts-znf_b1h_alignment/ZFP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP1-201/pos_patterns.ENCSR586DEH_ChIP_ZFP1_HepG2_ENCSR556WFV_counts_pattern_6.n_131-vs-ZFP1-201.alignment counts-znf_b1h_alignment/ZFP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP1-201/pos_patterns.ENCSR586DEH_ChIP_ZFP1_HepG2_ENCSR556WFV_counts_pattern_7.n_124-vs-ZFP1-201.alignment counts-znf_b1h_alignment/ZFP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP1-201/pos_patterns.ENCSR586DEH_ChIP_ZFP1_HepG2_ENCSR556WFV_counts_pattern_8.n_94-vs-ZFP1-201.alignment counts-znf_b1h_alignment/ZFP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP1-201/pos_patterns.ENCSR617POJ_ChIP_ZFP1_K562_ENCSR848ZRL_counts_pattern_0.n_1495-vs-ZFP1-201.alignment counts-znf_b1h_alignment/ZFP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP1-201/pos_patterns.ENCSR617POJ_ChIP_ZFP1_K562_ENCSR848ZRL_counts_pattern_1.n_286-vs-ZFP1-201.alignment counts-znf_b1h_alignment/ZFP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP1-201/pos_patterns.ENCSR617POJ_ChIP_ZFP1_K562_ENCSR848ZRL_counts_pattern_2.n_271-vs-ZFP1-201.alignment counts-znf_b1h_alignment/ZFP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP1-201/pos_patterns.ENCSR617POJ_ChIP_ZFP1_K562_ENCSR848ZRL_counts_pattern_3.n_40-vs-ZFP1-201.alignment counts-znf_b1h_alignment/ZFP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP1-201/pos_patterns.ENCSR617POJ_ChIP_ZFP1_K562_ENCSR848ZRL_counts_pattern_4.n_34-vs-ZFP1-201.alignment counts-znf_b1h_alignment/ZFP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP1-201/pos_patterns.ENCSR617POJ_ChIP_ZFP1_K562_ENCSR848ZRL_counts_pattern_5.n_28-vs-ZFP1-201.alignment counts-znf_b1h_alignment/ZFP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP14-201/ChipExo_models_ZFP14_counts-pos.pattern_0.n_724-vs-ZFP14-201.alignment counts-znf_b1h_alignment/ZFP14-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP14-201/ChipExo_models_ZFP14_counts-pos.pattern_1.n_151-vs-ZFP14-201.alignment counts-znf_b1h_alignment/ZFP14-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP14-201/ChipExo_models_ZFP14_counts-pos.pattern_2.n_55-vs-ZFP14-201.alignment counts-znf_b1h_alignment/ZFP14-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP14-201/ChipExo_models_ZFP14_counts-pos.pattern_3.n_43-vs-ZFP14-201.alignment counts-znf_b1h_alignment/ZFP14-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP14-201/ChipExo_models_ZFP14_counts-pos.pattern_4.n_40-vs-ZFP14-201.alignment counts-znf_b1h_alignment/ZFP14-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP14-201/pos_patterns.ENCSR620DBD_ChIP_ZFP14_HepG2_ENCSR171EIQ_counts_pattern_0.n_554-vs-ZFP14-201.alignment counts-znf_b1h_alignment/ZFP14-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP14-201/pos_patterns.ENCSR620DBD_ChIP_ZFP14_HepG2_ENCSR171EIQ_counts_pattern_10.n_29-vs-ZFP14-201.alignment counts-znf_b1h_alignment/ZFP14-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP14-201/pos_patterns.ENCSR620DBD_ChIP_ZFP14_HepG2_ENCSR171EIQ_counts_pattern_11.n_28-vs-ZFP14-201.alignment counts-znf_b1h_alignment/ZFP14-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP14-201/pos_patterns.ENCSR620DBD_ChIP_ZFP14_HepG2_ENCSR171EIQ_counts_pattern_1.n_554-vs-ZFP14-201.alignment counts-znf_b1h_alignment/ZFP14-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP14-201/pos_patterns.ENCSR620DBD_ChIP_ZFP14_HepG2_ENCSR171EIQ_counts_pattern_2.n_425-vs-ZFP14-201.alignment counts-znf_b1h_alignment/ZFP14-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP14-201/pos_patterns.ENCSR620DBD_ChIP_ZFP14_HepG2_ENCSR171EIQ_counts_pattern_3.n_280-vs-ZFP14-201.alignment counts-znf_b1h_alignment/ZFP14-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP14-201/pos_patterns.ENCSR620DBD_ChIP_ZFP14_HepG2_ENCSR171EIQ_counts_pattern_4.n_175-vs-ZFP14-201.alignment counts-znf_b1h_alignment/ZFP14-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP14-201/pos_patterns.ENCSR620DBD_ChIP_ZFP14_HepG2_ENCSR171EIQ_counts_pattern_5.n_122-vs-ZFP14-201.alignment counts-znf_b1h_alignment/ZFP14-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP14-201/pos_patterns.ENCSR620DBD_ChIP_ZFP14_HepG2_ENCSR171EIQ_counts_pattern_6.n_87-vs-ZFP14-201.alignment counts-znf_b1h_alignment/ZFP14-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP14-201/pos_patterns.ENCSR620DBD_ChIP_ZFP14_HepG2_ENCSR171EIQ_counts_pattern_7.n_69-vs-ZFP14-201.alignment counts-znf_b1h_alignment/ZFP14-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP14-201/pos_patterns.ENCSR620DBD_ChIP_ZFP14_HepG2_ENCSR171EIQ_counts_pattern_8.n_61-vs-ZFP14-201.alignment counts-znf_b1h_alignment/ZFP14-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP14-201/pos_patterns.ENCSR620DBD_ChIP_ZFP14_HepG2_ENCSR171EIQ_counts_pattern_9.n_54-vs-ZFP14-201.alignment counts-znf_b1h_alignment/ZFP14-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP28-201/Hughes_GR_models_ZFP28_counts-pos.pattern_0.n_1503-vs-ZFP28-201.alignment counts-znf_b1h_alignment/ZFP28-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP28-201/Hughes_GR_models_ZFP28_counts-pos.pattern_1.n_1017-vs-ZFP28-201.alignment counts-znf_b1h_alignment/ZFP28-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP28-201/Hughes_GR_models_ZFP28_counts-pos.pattern_2.n_845-vs-ZFP28-201.alignment counts-znf_b1h_alignment/ZFP28-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP28-201/Hughes_GR_models_ZFP28_counts-pos.pattern_3.n_34-vs-ZFP28-201.alignment counts-znf_b1h_alignment/ZFP28-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP30-201/pos_patterns.ENCSR279OXE_ChIP_ZFP30_K562_ENCSR162KYA_counts_pattern_0.n_413-vs-ZFP30-201.alignment counts-znf_b1h_alignment/ZFP30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP30-201/pos_patterns.ENCSR279OXE_ChIP_ZFP30_K562_ENCSR162KYA_counts_pattern_1.n_197-vs-ZFP30-201.alignment counts-znf_b1h_alignment/ZFP30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP30-201/pos_patterns.ENCSR279OXE_ChIP_ZFP30_K562_ENCSR162KYA_counts_pattern_2.n_41-vs-ZFP30-201.alignment counts-znf_b1h_alignment/ZFP30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP30-201/pos_patterns.ENCSR279OXE_ChIP_ZFP30_K562_ENCSR162KYA_counts_pattern_3.n_26-vs-ZFP30-201.alignment counts-znf_b1h_alignment/ZFP30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP30-201/pos_patterns.ENCSR376QPI_ChIP_ZFP30_SK-N-SH_ENCSR611GYZ_counts_pattern_0.n_1462-vs-ZFP30-201.alignment counts-znf_b1h_alignment/ZFP30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP30-201/pos_patterns.ENCSR376QPI_ChIP_ZFP30_SK-N-SH_ENCSR611GYZ_counts_pattern_10.n_113-vs-ZFP30-201.alignment counts-znf_b1h_alignment/ZFP30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP30-201/pos_patterns.ENCSR376QPI_ChIP_ZFP30_SK-N-SH_ENCSR611GYZ_counts_pattern_11.n_90-vs-ZFP30-201.alignment counts-znf_b1h_alignment/ZFP30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP30-201/pos_patterns.ENCSR376QPI_ChIP_ZFP30_SK-N-SH_ENCSR611GYZ_counts_pattern_12.n_79-vs-ZFP30-201.alignment counts-znf_b1h_alignment/ZFP30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP30-201/pos_patterns.ENCSR376QPI_ChIP_ZFP30_SK-N-SH_ENCSR611GYZ_counts_pattern_13.n_71-vs-ZFP30-201.alignment counts-znf_b1h_alignment/ZFP30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP30-201/pos_patterns.ENCSR376QPI_ChIP_ZFP30_SK-N-SH_ENCSR611GYZ_counts_pattern_14.n_58-vs-ZFP30-201.alignment counts-znf_b1h_alignment/ZFP30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP30-201/pos_patterns.ENCSR376QPI_ChIP_ZFP30_SK-N-SH_ENCSR611GYZ_counts_pattern_15.n_28-vs-ZFP30-201.alignment counts-znf_b1h_alignment/ZFP30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP30-201/pos_patterns.ENCSR376QPI_ChIP_ZFP30_SK-N-SH_ENCSR611GYZ_counts_pattern_1.n_742-vs-ZFP30-201.alignment counts-znf_b1h_alignment/ZFP30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP30-201/pos_patterns.ENCSR376QPI_ChIP_ZFP30_SK-N-SH_ENCSR611GYZ_counts_pattern_2.n_648-vs-ZFP30-201.alignment counts-znf_b1h_alignment/ZFP30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP30-201/pos_patterns.ENCSR376QPI_ChIP_ZFP30_SK-N-SH_ENCSR611GYZ_counts_pattern_3.n_610-vs-ZFP30-201.alignment counts-znf_b1h_alignment/ZFP30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP30-201/pos_patterns.ENCSR376QPI_ChIP_ZFP30_SK-N-SH_ENCSR611GYZ_counts_pattern_4.n_237-vs-ZFP30-201.alignment counts-znf_b1h_alignment/ZFP30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP30-201/pos_patterns.ENCSR376QPI_ChIP_ZFP30_SK-N-SH_ENCSR611GYZ_counts_pattern_5.n_199-vs-ZFP30-201.alignment counts-znf_b1h_alignment/ZFP30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP30-201/pos_patterns.ENCSR376QPI_ChIP_ZFP30_SK-N-SH_ENCSR611GYZ_counts_pattern_6.n_187-vs-ZFP30-201.alignment counts-znf_b1h_alignment/ZFP30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP30-201/pos_patterns.ENCSR376QPI_ChIP_ZFP30_SK-N-SH_ENCSR611GYZ_counts_pattern_7.n_135-vs-ZFP30-201.alignment counts-znf_b1h_alignment/ZFP30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP30-201/pos_patterns.ENCSR376QPI_ChIP_ZFP30_SK-N-SH_ENCSR611GYZ_counts_pattern_8.n_132-vs-ZFP30-201.alignment counts-znf_b1h_alignment/ZFP30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP30-201/pos_patterns.ENCSR376QPI_ChIP_ZFP30_SK-N-SH_ENCSR611GYZ_counts_pattern_9.n_119-vs-ZFP30-201.alignment counts-znf_b1h_alignment/ZFP30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP3-201/Hughes_NB_models_ZFP3_counts-pos.pattern_0.n_1000-vs-ZFP3-201.alignment counts-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP3-201/neg_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_counts_pattern_0.n_67-vs-ZFP3-201.alignment counts-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP3-201/neg_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_counts_pattern_1.n_49-vs-ZFP3-201.alignment counts-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP3-201/neg_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_counts_pattern_2.n_28-vs-ZFP3-201.alignment counts-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP3-201/neg_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_counts_pattern_3.n_23-vs-ZFP3-201.alignment counts-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP3-201/neg_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_counts_pattern_4.n_20-vs-ZFP3-201.alignment counts-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR134QIE_ChIP_ZFP3_HEK293_ENCSR097ZPZ_counts_pattern_0.n_2628-vs-ZFP3-201.alignment counts-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR134QIE_ChIP_ZFP3_HEK293_ENCSR097ZPZ_counts_pattern_1.n_445-vs-ZFP3-201.alignment counts-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR134QIE_ChIP_ZFP3_HEK293_ENCSR097ZPZ_counts_pattern_2.n_361-vs-ZFP3-201.alignment counts-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR134QIE_ChIP_ZFP3_HEK293_ENCSR097ZPZ_counts_pattern_3.n_280-vs-ZFP3-201.alignment counts-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR134QIE_ChIP_ZFP3_HEK293_ENCSR097ZPZ_counts_pattern_4.n_86-vs-ZFP3-201.alignment counts-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR134QIE_ChIP_ZFP3_HEK293_ENCSR097ZPZ_counts_pattern_5.n_80-vs-ZFP3-201.alignment counts-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR134QIE_ChIP_ZFP3_HEK293_ENCSR097ZPZ_counts_pattern_6.n_72-vs-ZFP3-201.alignment counts-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR134QIE_ChIP_ZFP3_HEK293_ENCSR097ZPZ_counts_pattern_7.n_66-vs-ZFP3-201.alignment counts-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR134QIE_ChIP_ZFP3_HEK293_ENCSR097ZPZ_counts_pattern_8.n_32-vs-ZFP3-201.alignment counts-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_counts_pattern_0.n_4740-vs-ZFP3-201.alignment counts-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_counts_pattern_10.n_77-vs-ZFP3-201.alignment counts-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_counts_pattern_11.n_75-vs-ZFP3-201.alignment counts-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_counts_pattern_12.n_61-vs-ZFP3-201.alignment counts-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_counts_pattern_13.n_60-vs-ZFP3-201.alignment counts-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_counts_pattern_14.n_48-vs-ZFP3-201.alignment counts-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_counts_pattern_15.n_40-vs-ZFP3-201.alignment counts-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_counts_pattern_16.n_27-vs-ZFP3-201.alignment counts-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_counts_pattern_17.n_22-vs-ZFP3-201.alignment counts-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_counts_pattern_18.n_20-vs-ZFP3-201.alignment counts-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_counts_pattern_1.n_3405-vs-ZFP3-201.alignment counts-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_counts_pattern_2.n_1895-vs-ZFP3-201.alignment counts-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_counts_pattern_3.n_416-vs-ZFP3-201.alignment counts-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_counts_pattern_4.n_312-vs-ZFP3-201.alignment counts-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_counts_pattern_5.n_232-vs-ZFP3-201.alignment counts-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_counts_pattern_6.n_231-vs-ZFP3-201.alignment counts-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_counts_pattern_7.n_155-vs-ZFP3-201.alignment counts-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_counts_pattern_8.n_126-vs-ZFP3-201.alignment counts-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_counts_pattern_9.n_107-vs-ZFP3-201.alignment counts-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR365GRX_ChIP_ZFP37_HEK293_ENCSR068EXE_counts_pattern_0.n_2101-vs-ZFP37-201.alignment counts-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR365GRX_ChIP_ZFP37_HEK293_ENCSR068EXE_counts_pattern_1.n_1364-vs-ZFP37-201.alignment counts-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR365GRX_ChIP_ZFP37_HEK293_ENCSR068EXE_counts_pattern_2.n_1322-vs-ZFP37-201.alignment counts-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR365GRX_ChIP_ZFP37_HEK293_ENCSR068EXE_counts_pattern_3.n_1244-vs-ZFP37-201.alignment counts-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR365GRX_ChIP_ZFP37_HEK293_ENCSR068EXE_counts_pattern_4.n_327-vs-ZFP37-201.alignment counts-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR365GRX_ChIP_ZFP37_HEK293_ENCSR068EXE_counts_pattern_5.n_255-vs-ZFP37-201.alignment counts-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR365GRX_ChIP_ZFP37_HEK293_ENCSR068EXE_counts_pattern_6.n_151-vs-ZFP37-201.alignment counts-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR365GRX_ChIP_ZFP37_HEK293_ENCSR068EXE_counts_pattern_7.n_143-vs-ZFP37-201.alignment counts-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR365GRX_ChIP_ZFP37_HEK293_ENCSR068EXE_counts_pattern_8.n_123-vs-ZFP37-201.alignment counts-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR365GRX_ChIP_ZFP37_HEK293_ENCSR068EXE_counts_pattern_9.n_110-vs-ZFP37-201.alignment counts-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_counts_pattern_0.n_1857-vs-ZFP37-201.alignment counts-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_counts_pattern_10.n_174-vs-ZFP37-201.alignment counts-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_counts_pattern_11.n_173-vs-ZFP37-201.alignment counts-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_counts_pattern_12.n_171-vs-ZFP37-201.alignment counts-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_counts_pattern_13.n_164-vs-ZFP37-201.alignment counts-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_counts_pattern_14.n_156-vs-ZFP37-201.alignment counts-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_counts_pattern_15.n_147-vs-ZFP37-201.alignment counts-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_counts_pattern_16.n_147-vs-ZFP37-201.alignment counts-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_counts_pattern_17.n_146-vs-ZFP37-201.alignment counts-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_counts_pattern_18.n_140-vs-ZFP37-201.alignment counts-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_counts_pattern_19.n_136-vs-ZFP37-201.alignment counts-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_counts_pattern_1.n_674-vs-ZFP37-201.alignment counts-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_counts_pattern_20.n_117-vs-ZFP37-201.alignment counts-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_counts_pattern_21.n_116-vs-ZFP37-201.alignment counts-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_counts_pattern_22.n_104-vs-ZFP37-201.alignment counts-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_counts_pattern_23.n_103-vs-ZFP37-201.alignment counts-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_counts_pattern_24.n_90-vs-ZFP37-201.alignment counts-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_counts_pattern_25.n_89-vs-ZFP37-201.alignment counts-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_counts_pattern_26.n_84-vs-ZFP37-201.alignment counts-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_counts_pattern_27.n_64-vs-ZFP37-201.alignment counts-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_counts_pattern_28.n_57-vs-ZFP37-201.alignment counts-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_counts_pattern_29.n_48-vs-ZFP37-201.alignment counts-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_counts_pattern_2.n_600-vs-ZFP37-201.alignment counts-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_counts_pattern_30.n_40-vs-ZFP37-201.alignment counts-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_counts_pattern_31.n_35-vs-ZFP37-201.alignment counts-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_counts_pattern_32.n_33-vs-ZFP37-201.alignment counts-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_counts_pattern_33.n_23-vs-ZFP37-201.alignment counts-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_counts_pattern_3.n_530-vs-ZFP37-201.alignment counts-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_counts_pattern_4.n_387-vs-ZFP37-201.alignment counts-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_counts_pattern_5.n_260-vs-ZFP37-201.alignment counts-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_counts_pattern_6.n_246-vs-ZFP37-201.alignment counts-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_counts_pattern_7.n_193-vs-ZFP37-201.alignment counts-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_counts_pattern_8.n_190-vs-ZFP37-201.alignment counts-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_counts_pattern_9.n_185-vs-ZFP37-201.alignment counts-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP41-201/neg_patterns.ENCSR731UPJ_ChIP_ZFP41_HepG2_ENCSR399MFQ_counts_pattern_0.n_41-vs-ZFP41-201.alignment counts-znf_b1h_alignment/ZFP41-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP41-201/neg_patterns.ENCSR731UPJ_ChIP_ZFP41_HepG2_ENCSR399MFQ_counts_pattern_1.n_29-vs-ZFP41-201.alignment counts-znf_b1h_alignment/ZFP41-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP41-201/neg_patterns.ENCSR731UPJ_ChIP_ZFP41_HepG2_ENCSR399MFQ_counts_pattern_2.n_23-vs-ZFP41-201.alignment counts-znf_b1h_alignment/ZFP41-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP41-201/neg_patterns.ENCSR731UPJ_ChIP_ZFP41_HepG2_ENCSR399MFQ_counts_pattern_3.n_20-vs-ZFP41-201.alignment counts-znf_b1h_alignment/ZFP41-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP41-201/pos_patterns.ENCSR348ONY_ChIP_ZFP41_HEK293_ENCSR192ZFC_counts_pattern_0.n_118-vs-ZFP41-201.alignment counts-znf_b1h_alignment/ZFP41-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP41-201/pos_patterns.ENCSR348ONY_ChIP_ZFP41_HEK293_ENCSR192ZFC_counts_pattern_1.n_100-vs-ZFP41-201.alignment counts-znf_b1h_alignment/ZFP41-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP41-201/pos_patterns.ENCSR348ONY_ChIP_ZFP41_HEK293_ENCSR192ZFC_counts_pattern_2.n_40-vs-ZFP41-201.alignment counts-znf_b1h_alignment/ZFP41-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP41-201/pos_patterns.ENCSR348ONY_ChIP_ZFP41_HEK293_ENCSR192ZFC_counts_pattern_3.n_31-vs-ZFP41-201.alignment counts-znf_b1h_alignment/ZFP41-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP41-201/pos_patterns.ENCSR348ONY_ChIP_ZFP41_HEK293_ENCSR192ZFC_counts_pattern_4.n_27-vs-ZFP41-201.alignment counts-znf_b1h_alignment/ZFP41-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP41-201/pos_patterns.ENCSR348ONY_ChIP_ZFP41_HEK293_ENCSR192ZFC_counts_pattern_5.n_21-vs-ZFP41-201.alignment counts-znf_b1h_alignment/ZFP41-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP41-201/pos_patterns.ENCSR348ONY_ChIP_ZFP41_HEK293_ENCSR192ZFC_counts_pattern_6.n_20-vs-ZFP41-201.alignment counts-znf_b1h_alignment/ZFP41-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP41-201/pos_patterns.ENCSR731UPJ_ChIP_ZFP41_HepG2_ENCSR399MFQ_counts_pattern_0.n_4228-vs-ZFP41-201.alignment counts-znf_b1h_alignment/ZFP41-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP41-201/pos_patterns.ENCSR731UPJ_ChIP_ZFP41_HepG2_ENCSR399MFQ_counts_pattern_1.n_384-vs-ZFP41-201.alignment counts-znf_b1h_alignment/ZFP41-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP41-201/pos_patterns.ENCSR731UPJ_ChIP_ZFP41_HepG2_ENCSR399MFQ_counts_pattern_2.n_368-vs-ZFP41-201.alignment counts-znf_b1h_alignment/ZFP41-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP41-201/pos_patterns.ENCSR731UPJ_ChIP_ZFP41_HepG2_ENCSR399MFQ_counts_pattern_3.n_192-vs-ZFP41-201.alignment counts-znf_b1h_alignment/ZFP41-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP41-201/pos_patterns.ENCSR731UPJ_ChIP_ZFP41_HepG2_ENCSR399MFQ_counts_pattern_4.n_142-vs-ZFP41-201.alignment counts-znf_b1h_alignment/ZFP41-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP41-201/pos_patterns.ENCSR731UPJ_ChIP_ZFP41_HepG2_ENCSR399MFQ_counts_pattern_5.n_61-vs-ZFP41-201.alignment counts-znf_b1h_alignment/ZFP41-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP42-201/Hughes_GR_models_ZFP42_counts-pos.pattern_0.n_1842-vs-ZFP42-201.alignment counts-znf_b1h_alignment/ZFP42-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP62-201/neg_patterns.ENCSR495RMN_ChIP_ZFP62_HepG2_ENCSR181AXV_counts_pattern_0.n_21-vs-ZFP62-201.alignment counts-znf_b1h_alignment/ZFP62-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP62-201/pos_patterns.ENCSR495RMN_ChIP_ZFP62_HepG2_ENCSR181AXV_counts_pattern_0.n_220-vs-ZFP62-201.alignment counts-znf_b1h_alignment/ZFP62-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP62-201/pos_patterns.ENCSR495RMN_ChIP_ZFP62_HepG2_ENCSR181AXV_counts_pattern_10.n_48-vs-ZFP62-201.alignment counts-znf_b1h_alignment/ZFP62-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP62-201/pos_patterns.ENCSR495RMN_ChIP_ZFP62_HepG2_ENCSR181AXV_counts_pattern_11.n_42-vs-ZFP62-201.alignment counts-znf_b1h_alignment/ZFP62-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP62-201/pos_patterns.ENCSR495RMN_ChIP_ZFP62_HepG2_ENCSR181AXV_counts_pattern_12.n_41-vs-ZFP62-201.alignment counts-znf_b1h_alignment/ZFP62-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP62-201/pos_patterns.ENCSR495RMN_ChIP_ZFP62_HepG2_ENCSR181AXV_counts_pattern_13.n_41-vs-ZFP62-201.alignment counts-znf_b1h_alignment/ZFP62-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP62-201/pos_patterns.ENCSR495RMN_ChIP_ZFP62_HepG2_ENCSR181AXV_counts_pattern_14.n_37-vs-ZFP62-201.alignment counts-znf_b1h_alignment/ZFP62-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP62-201/pos_patterns.ENCSR495RMN_ChIP_ZFP62_HepG2_ENCSR181AXV_counts_pattern_15.n_28-vs-ZFP62-201.alignment counts-znf_b1h_alignment/ZFP62-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP62-201/pos_patterns.ENCSR495RMN_ChIP_ZFP62_HepG2_ENCSR181AXV_counts_pattern_16.n_25-vs-ZFP62-201.alignment counts-znf_b1h_alignment/ZFP62-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP62-201/pos_patterns.ENCSR495RMN_ChIP_ZFP62_HepG2_ENCSR181AXV_counts_pattern_17.n_25-vs-ZFP62-201.alignment counts-znf_b1h_alignment/ZFP62-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP62-201/pos_patterns.ENCSR495RMN_ChIP_ZFP62_HepG2_ENCSR181AXV_counts_pattern_18.n_24-vs-ZFP62-201.alignment counts-znf_b1h_alignment/ZFP62-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP62-201/pos_patterns.ENCSR495RMN_ChIP_ZFP62_HepG2_ENCSR181AXV_counts_pattern_19.n_24-vs-ZFP62-201.alignment counts-znf_b1h_alignment/ZFP62-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP62-201/pos_patterns.ENCSR495RMN_ChIP_ZFP62_HepG2_ENCSR181AXV_counts_pattern_1.n_109-vs-ZFP62-201.alignment counts-znf_b1h_alignment/ZFP62-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP62-201/pos_patterns.ENCSR495RMN_ChIP_ZFP62_HepG2_ENCSR181AXV_counts_pattern_20.n_23-vs-ZFP62-201.alignment counts-znf_b1h_alignment/ZFP62-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP62-201/pos_patterns.ENCSR495RMN_ChIP_ZFP62_HepG2_ENCSR181AXV_counts_pattern_2.n_70-vs-ZFP62-201.alignment counts-znf_b1h_alignment/ZFP62-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP62-201/pos_patterns.ENCSR495RMN_ChIP_ZFP62_HepG2_ENCSR181AXV_counts_pattern_3.n_66-vs-ZFP62-201.alignment counts-znf_b1h_alignment/ZFP62-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP62-201/pos_patterns.ENCSR495RMN_ChIP_ZFP62_HepG2_ENCSR181AXV_counts_pattern_4.n_64-vs-ZFP62-201.alignment counts-znf_b1h_alignment/ZFP62-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP62-201/pos_patterns.ENCSR495RMN_ChIP_ZFP62_HepG2_ENCSR181AXV_counts_pattern_5.n_62-vs-ZFP62-201.alignment counts-znf_b1h_alignment/ZFP62-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP62-201/pos_patterns.ENCSR495RMN_ChIP_ZFP62_HepG2_ENCSR181AXV_counts_pattern_6.n_56-vs-ZFP62-201.alignment counts-znf_b1h_alignment/ZFP62-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP62-201/pos_patterns.ENCSR495RMN_ChIP_ZFP62_HepG2_ENCSR181AXV_counts_pattern_7.n_53-vs-ZFP62-201.alignment counts-znf_b1h_alignment/ZFP62-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP62-201/pos_patterns.ENCSR495RMN_ChIP_ZFP62_HepG2_ENCSR181AXV_counts_pattern_8.n_50-vs-ZFP62-201.alignment counts-znf_b1h_alignment/ZFP62-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP62-201/pos_patterns.ENCSR495RMN_ChIP_ZFP62_HepG2_ENCSR181AXV_counts_pattern_9.n_48-vs-ZFP62-201.alignment counts-znf_b1h_alignment/ZFP62-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP64-201/Hughes_GR_models_ZFP64_counts-pos.pattern_0.n_9977-vs-ZFP64-201.alignment counts-znf_b1h_alignment/ZFP64-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP64-201/Hughes_GR_models_ZFP64_counts-pos.pattern_1.n_8744-vs-ZFP64-201.alignment counts-znf_b1h_alignment/ZFP64-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP64-201/Hughes_GR_models_ZFP64_counts-pos.pattern_2.n_521-vs-ZFP64-201.alignment counts-znf_b1h_alignment/ZFP64-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP64-201/Hughes_GR_models_ZFP64_counts-pos.pattern_3.n_366-vs-ZFP64-201.alignment counts-znf_b1h_alignment/ZFP64-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP64-201/Hughes_GR_models_ZFP64_counts-pos.pattern_4.n_27-vs-ZFP64-201.alignment counts-znf_b1h_alignment/ZFP64-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP64-201/Hughes_GR_models_ZFP64_counts-pos.pattern_5.n_25-vs-ZFP64-201.alignment counts-znf_b1h_alignment/ZFP64-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP64-201/neg_patterns.ENCSR487CPI_ChIP_ZFP64_HepG2_ENCSR232ABE_counts_pattern_0.n_24-vs-ZFP64-201.alignment counts-znf_b1h_alignment/ZFP64-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP64-201/neg_patterns.ENCSR487CPI_ChIP_ZFP64_HepG2_ENCSR232ABE_counts_pattern_1.n_22-vs-ZFP64-201.alignment counts-znf_b1h_alignment/ZFP64-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP64-201/pos_patterns.ENCSR487CPI_ChIP_ZFP64_HepG2_ENCSR232ABE_counts_pattern_0.n_6081-vs-ZFP64-201.alignment counts-znf_b1h_alignment/ZFP64-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP64-201/pos_patterns.ENCSR487CPI_ChIP_ZFP64_HepG2_ENCSR232ABE_counts_pattern_1.n_828-vs-ZFP64-201.alignment counts-znf_b1h_alignment/ZFP64-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP64-201/pos_patterns.ENCSR487CPI_ChIP_ZFP64_HepG2_ENCSR232ABE_counts_pattern_2.n_367-vs-ZFP64-201.alignment counts-znf_b1h_alignment/ZFP64-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP64-201/pos_patterns.ENCSR487CPI_ChIP_ZFP64_HepG2_ENCSR232ABE_counts_pattern_3.n_218-vs-ZFP64-201.alignment counts-znf_b1h_alignment/ZFP64-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP64-201/pos_patterns.ENCSR487CPI_ChIP_ZFP64_HepG2_ENCSR232ABE_counts_pattern_4.n_183-vs-ZFP64-201.alignment counts-znf_b1h_alignment/ZFP64-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP64-201/pos_patterns.ENCSR487CPI_ChIP_ZFP64_HepG2_ENCSR232ABE_counts_pattern_5.n_78-vs-ZFP64-201.alignment counts-znf_b1h_alignment/ZFP64-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP64-205/Hughes_GR_models_ZFP64_counts-pos.pattern_0.n_9977-vs-ZFP64-205.alignment counts-znf_b1h_alignment/ZFP64-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP64-205/Hughes_GR_models_ZFP64_counts-pos.pattern_1.n_8744-vs-ZFP64-205.alignment counts-znf_b1h_alignment/ZFP64-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP64-205/Hughes_GR_models_ZFP64_counts-pos.pattern_2.n_521-vs-ZFP64-205.alignment counts-znf_b1h_alignment/ZFP64-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP64-205/Hughes_GR_models_ZFP64_counts-pos.pattern_3.n_366-vs-ZFP64-205.alignment counts-znf_b1h_alignment/ZFP64-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP64-205/Hughes_GR_models_ZFP64_counts-pos.pattern_4.n_27-vs-ZFP64-205.alignment counts-znf_b1h_alignment/ZFP64-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP64-205/Hughes_GR_models_ZFP64_counts-pos.pattern_5.n_25-vs-ZFP64-205.alignment counts-znf_b1h_alignment/ZFP64-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP64-205/neg_patterns.ENCSR487CPI_ChIP_ZFP64_HepG2_ENCSR232ABE_counts_pattern_0.n_24-vs-ZFP64-205.alignment counts-znf_b1h_alignment/ZFP64-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP64-205/neg_patterns.ENCSR487CPI_ChIP_ZFP64_HepG2_ENCSR232ABE_counts_pattern_1.n_22-vs-ZFP64-205.alignment counts-znf_b1h_alignment/ZFP64-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP64-205/pos_patterns.ENCSR487CPI_ChIP_ZFP64_HepG2_ENCSR232ABE_counts_pattern_0.n_6081-vs-ZFP64-205.alignment counts-znf_b1h_alignment/ZFP64-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP64-205/pos_patterns.ENCSR487CPI_ChIP_ZFP64_HepG2_ENCSR232ABE_counts_pattern_1.n_828-vs-ZFP64-205.alignment counts-znf_b1h_alignment/ZFP64-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP64-205/pos_patterns.ENCSR487CPI_ChIP_ZFP64_HepG2_ENCSR232ABE_counts_pattern_2.n_367-vs-ZFP64-205.alignment counts-znf_b1h_alignment/ZFP64-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP64-205/pos_patterns.ENCSR487CPI_ChIP_ZFP64_HepG2_ENCSR232ABE_counts_pattern_3.n_218-vs-ZFP64-205.alignment counts-znf_b1h_alignment/ZFP64-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP64-205/pos_patterns.ENCSR487CPI_ChIP_ZFP64_HepG2_ENCSR232ABE_counts_pattern_4.n_183-vs-ZFP64-205.alignment counts-znf_b1h_alignment/ZFP64-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP64-205/pos_patterns.ENCSR487CPI_ChIP_ZFP64_HepG2_ENCSR232ABE_counts_pattern_5.n_78-vs-ZFP64-205.alignment counts-znf_b1h_alignment/ZFP64-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP69-201/ChipExo_models_ZFP69_counts-pos.pattern_0.n_1531-vs-ZFP69-201.alignment counts-znf_b1h_alignment/ZFP69-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP69B-201/ChipExo_models_ZFP69B_counts-pos.pattern_0.n_5083-vs-ZFP69B-201.alignment counts-znf_b1h_alignment/ZFP69B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP69B-201/pos_patterns.ENCSR381VYR_ChIP_ZFP69B_HEK293_ENCSR105YBR_counts_pattern_0.n_5951-vs-ZFP69B-201.alignment counts-znf_b1h_alignment/ZFP69B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP69B-201/pos_patterns.ENCSR381VYR_ChIP_ZFP69B_HEK293_ENCSR105YBR_counts_pattern_1.n_2035-vs-ZFP69B-201.alignment counts-znf_b1h_alignment/ZFP69B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP69B-201/pos_patterns.ENCSR381VYR_ChIP_ZFP69B_HEK293_ENCSR105YBR_counts_pattern_2.n_1772-vs-ZFP69B-201.alignment counts-znf_b1h_alignment/ZFP69B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP69B-201/pos_patterns.ENCSR381VYR_ChIP_ZFP69B_HEK293_ENCSR105YBR_counts_pattern_3.n_1372-vs-ZFP69B-201.alignment counts-znf_b1h_alignment/ZFP69B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP69B-201/pos_patterns.ENCSR381VYR_ChIP_ZFP69B_HEK293_ENCSR105YBR_counts_pattern_4.n_801-vs-ZFP69B-201.alignment counts-znf_b1h_alignment/ZFP69B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP69B-201/pos_patterns.ENCSR381VYR_ChIP_ZFP69B_HEK293_ENCSR105YBR_counts_pattern_5.n_298-vs-ZFP69B-201.alignment counts-znf_b1h_alignment/ZFP69B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP69B-201/pos_patterns.ENCSR381VYR_ChIP_ZFP69B_HEK293_ENCSR105YBR_counts_pattern_6.n_88-vs-ZFP69B-201.alignment counts-znf_b1h_alignment/ZFP69B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP69B-201/pos_patterns.ENCSR381VYR_ChIP_ZFP69B_HEK293_ENCSR105YBR_counts_pattern_7.n_34-vs-ZFP69B-201.alignment counts-znf_b1h_alignment/ZFP69B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP82-201/Hughes_GR_models_ZFP82_counts-pos.pattern_0.n_324-vs-ZFP82-201.alignment counts-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP82-201/Hughes_GR_models_ZFP82_counts-pos.pattern_1.n_64-vs-ZFP82-201.alignment counts-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP82-201/Hughes_GR_models_ZFP82_counts-pos.pattern_2.n_59-vs-ZFP82-201.alignment counts-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP82-201/Hughes_GR_models_ZFP82_counts-pos.pattern_3.n_44-vs-ZFP82-201.alignment counts-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP82-201/Hughes_GR_models_ZFP82_counts-pos.pattern_4.n_32-vs-ZFP82-201.alignment counts-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP82-201/Hughes_GR_models_ZFP82_counts-pos.pattern_5.n_32-vs-ZFP82-201.alignment counts-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP82-201/pos_patterns.ENCSR196FSX_ChIP_ZFP82_HepG2_ENCSR535QVS_counts_pattern_0.n_2248-vs-ZFP82-201.alignment counts-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP82-201/pos_patterns.ENCSR196FSX_ChIP_ZFP82_HepG2_ENCSR535QVS_counts_pattern_10.n_233-vs-ZFP82-201.alignment counts-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP82-201/pos_patterns.ENCSR196FSX_ChIP_ZFP82_HepG2_ENCSR535QVS_counts_pattern_11.n_225-vs-ZFP82-201.alignment counts-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP82-201/pos_patterns.ENCSR196FSX_ChIP_ZFP82_HepG2_ENCSR535QVS_counts_pattern_12.n_219-vs-ZFP82-201.alignment counts-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP82-201/pos_patterns.ENCSR196FSX_ChIP_ZFP82_HepG2_ENCSR535QVS_counts_pattern_13.n_215-vs-ZFP82-201.alignment counts-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP82-201/pos_patterns.ENCSR196FSX_ChIP_ZFP82_HepG2_ENCSR535QVS_counts_pattern_14.n_198-vs-ZFP82-201.alignment counts-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP82-201/pos_patterns.ENCSR196FSX_ChIP_ZFP82_HepG2_ENCSR535QVS_counts_pattern_15.n_181-vs-ZFP82-201.alignment counts-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP82-201/pos_patterns.ENCSR196FSX_ChIP_ZFP82_HepG2_ENCSR535QVS_counts_pattern_16.n_175-vs-ZFP82-201.alignment counts-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP82-201/pos_patterns.ENCSR196FSX_ChIP_ZFP82_HepG2_ENCSR535QVS_counts_pattern_17.n_167-vs-ZFP82-201.alignment counts-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP82-201/pos_patterns.ENCSR196FSX_ChIP_ZFP82_HepG2_ENCSR535QVS_counts_pattern_18.n_154-vs-ZFP82-201.alignment counts-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP82-201/pos_patterns.ENCSR196FSX_ChIP_ZFP82_HepG2_ENCSR535QVS_counts_pattern_19.n_112-vs-ZFP82-201.alignment counts-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP82-201/pos_patterns.ENCSR196FSX_ChIP_ZFP82_HepG2_ENCSR535QVS_counts_pattern_1.n_1781-vs-ZFP82-201.alignment counts-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP82-201/pos_patterns.ENCSR196FSX_ChIP_ZFP82_HepG2_ENCSR535QVS_counts_pattern_20.n_96-vs-ZFP82-201.alignment counts-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP82-201/pos_patterns.ENCSR196FSX_ChIP_ZFP82_HepG2_ENCSR535QVS_counts_pattern_21.n_92-vs-ZFP82-201.alignment counts-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP82-201/pos_patterns.ENCSR196FSX_ChIP_ZFP82_HepG2_ENCSR535QVS_counts_pattern_22.n_71-vs-ZFP82-201.alignment counts-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP82-201/pos_patterns.ENCSR196FSX_ChIP_ZFP82_HepG2_ENCSR535QVS_counts_pattern_23.n_70-vs-ZFP82-201.alignment counts-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP82-201/pos_patterns.ENCSR196FSX_ChIP_ZFP82_HepG2_ENCSR535QVS_counts_pattern_24.n_68-vs-ZFP82-201.alignment counts-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP82-201/pos_patterns.ENCSR196FSX_ChIP_ZFP82_HepG2_ENCSR535QVS_counts_pattern_25.n_68-vs-ZFP82-201.alignment counts-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP82-201/pos_patterns.ENCSR196FSX_ChIP_ZFP82_HepG2_ENCSR535QVS_counts_pattern_26.n_65-vs-ZFP82-201.alignment counts-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP82-201/pos_patterns.ENCSR196FSX_ChIP_ZFP82_HepG2_ENCSR535QVS_counts_pattern_27.n_62-vs-ZFP82-201.alignment counts-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP82-201/pos_patterns.ENCSR196FSX_ChIP_ZFP82_HepG2_ENCSR535QVS_counts_pattern_28.n_21-vs-ZFP82-201.alignment counts-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP82-201/pos_patterns.ENCSR196FSX_ChIP_ZFP82_HepG2_ENCSR535QVS_counts_pattern_2.n_743-vs-ZFP82-201.alignment counts-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP82-201/pos_patterns.ENCSR196FSX_ChIP_ZFP82_HepG2_ENCSR535QVS_counts_pattern_3.n_711-vs-ZFP82-201.alignment counts-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP82-201/pos_patterns.ENCSR196FSX_ChIP_ZFP82_HepG2_ENCSR535QVS_counts_pattern_4.n_528-vs-ZFP82-201.alignment counts-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP82-201/pos_patterns.ENCSR196FSX_ChIP_ZFP82_HepG2_ENCSR535QVS_counts_pattern_5.n_390-vs-ZFP82-201.alignment counts-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP82-201/pos_patterns.ENCSR196FSX_ChIP_ZFP82_HepG2_ENCSR535QVS_counts_pattern_6.n_383-vs-ZFP82-201.alignment counts-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP82-201/pos_patterns.ENCSR196FSX_ChIP_ZFP82_HepG2_ENCSR535QVS_counts_pattern_7.n_380-vs-ZFP82-201.alignment counts-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP82-201/pos_patterns.ENCSR196FSX_ChIP_ZFP82_HepG2_ENCSR535QVS_counts_pattern_8.n_339-vs-ZFP82-201.alignment counts-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP82-201/pos_patterns.ENCSR196FSX_ChIP_ZFP82_HepG2_ENCSR535QVS_counts_pattern_9.n_254-vs-ZFP82-201.alignment counts-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-201/ChipExo_models_ZFP90_counts-pos.pattern_0.n_386-vs-ZFP90-201.alignment counts-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-201/ChipExo_models_ZFP90_counts-pos.pattern_1.n_310-vs-ZFP90-201.alignment counts-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-201/ChipExo_models_ZFP90_counts-pos.pattern_2.n_75-vs-ZFP90-201.alignment counts-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-201/ChipExo_models_ZFP90_counts-pos.pattern_3.n_58-vs-ZFP90-201.alignment counts-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-201/ChipExo_models_ZFP90_counts-pos.pattern_4.n_43-vs-ZFP90-201.alignment counts-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-201/ChipExo_models_ZFP90_counts-pos.pattern_5.n_33-vs-ZFP90-201.alignment counts-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_0.n_2444-vs-ZFP90-201.alignment counts-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_10.n_377-vs-ZFP90-201.alignment counts-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_11.n_372-vs-ZFP90-201.alignment counts-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_12.n_341-vs-ZFP90-201.alignment counts-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_13.n_328-vs-ZFP90-201.alignment counts-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_14.n_303-vs-ZFP90-201.alignment counts-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_15.n_278-vs-ZFP90-201.alignment counts-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_16.n_254-vs-ZFP90-201.alignment counts-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_17.n_239-vs-ZFP90-201.alignment counts-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_18.n_201-vs-ZFP90-201.alignment counts-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_19.n_193-vs-ZFP90-201.alignment counts-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_1.n_1641-vs-ZFP90-201.alignment counts-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_20.n_177-vs-ZFP90-201.alignment counts-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_21.n_143-vs-ZFP90-201.alignment counts-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_22.n_133-vs-ZFP90-201.alignment counts-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_23.n_111-vs-ZFP90-201.alignment counts-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_24.n_109-vs-ZFP90-201.alignment counts-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_25.n_98-vs-ZFP90-201.alignment counts-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_26.n_96-vs-ZFP90-201.alignment counts-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_27.n_94-vs-ZFP90-201.alignment counts-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_28.n_68-vs-ZFP90-201.alignment counts-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_29.n_47-vs-ZFP90-201.alignment counts-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_2.n_1009-vs-ZFP90-201.alignment counts-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_30.n_35-vs-ZFP90-201.alignment counts-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_31.n_32-vs-ZFP90-201.alignment counts-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_32.n_30-vs-ZFP90-201.alignment counts-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_33.n_24-vs-ZFP90-201.alignment counts-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_3.n_781-vs-ZFP90-201.alignment counts-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_4.n_762-vs-ZFP90-201.alignment counts-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_5.n_710-vs-ZFP90-201.alignment counts-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_6.n_640-vs-ZFP90-201.alignment counts-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_7.n_486-vs-ZFP90-201.alignment counts-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_8.n_391-vs-ZFP90-201.alignment counts-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_9.n_379-vs-ZFP90-201.alignment counts-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-205/ChipExo_models_ZFP90_counts-pos.pattern_0.n_386-vs-ZFP90-205.alignment counts-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-205/ChipExo_models_ZFP90_counts-pos.pattern_1.n_310-vs-ZFP90-205.alignment counts-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-205/ChipExo_models_ZFP90_counts-pos.pattern_2.n_75-vs-ZFP90-205.alignment counts-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-205/ChipExo_models_ZFP90_counts-pos.pattern_3.n_58-vs-ZFP90-205.alignment counts-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-205/ChipExo_models_ZFP90_counts-pos.pattern_4.n_43-vs-ZFP90-205.alignment counts-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-205/ChipExo_models_ZFP90_counts-pos.pattern_5.n_33-vs-ZFP90-205.alignment counts-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-205/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_0.n_2444-vs-ZFP90-205.alignment counts-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-205/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_10.n_377-vs-ZFP90-205.alignment counts-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-205/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_11.n_372-vs-ZFP90-205.alignment counts-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-205/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_12.n_341-vs-ZFP90-205.alignment counts-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-205/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_13.n_328-vs-ZFP90-205.alignment counts-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-205/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_14.n_303-vs-ZFP90-205.alignment counts-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-205/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_15.n_278-vs-ZFP90-205.alignment counts-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-205/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_16.n_254-vs-ZFP90-205.alignment counts-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-205/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_17.n_239-vs-ZFP90-205.alignment counts-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-205/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_18.n_201-vs-ZFP90-205.alignment counts-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-205/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_19.n_193-vs-ZFP90-205.alignment counts-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-205/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_1.n_1641-vs-ZFP90-205.alignment counts-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-205/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_20.n_177-vs-ZFP90-205.alignment counts-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-205/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_21.n_143-vs-ZFP90-205.alignment counts-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-205/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_22.n_133-vs-ZFP90-205.alignment counts-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-205/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_23.n_111-vs-ZFP90-205.alignment counts-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-205/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_24.n_109-vs-ZFP90-205.alignment counts-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-205/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_25.n_98-vs-ZFP90-205.alignment counts-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-205/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_26.n_96-vs-ZFP90-205.alignment counts-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-205/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_27.n_94-vs-ZFP90-205.alignment counts-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-205/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_28.n_68-vs-ZFP90-205.alignment counts-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-205/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_29.n_47-vs-ZFP90-205.alignment counts-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-205/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_2.n_1009-vs-ZFP90-205.alignment counts-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-205/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_30.n_35-vs-ZFP90-205.alignment counts-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-205/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_31.n_32-vs-ZFP90-205.alignment counts-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-205/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_32.n_30-vs-ZFP90-205.alignment counts-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-205/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_33.n_24-vs-ZFP90-205.alignment counts-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-205/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_3.n_781-vs-ZFP90-205.alignment counts-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-205/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_4.n_762-vs-ZFP90-205.alignment counts-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-205/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_5.n_710-vs-ZFP90-205.alignment counts-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-205/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_6.n_640-vs-ZFP90-205.alignment counts-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-205/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_7.n_486-vs-ZFP90-205.alignment counts-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-205/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_8.n_391-vs-ZFP90-205.alignment counts-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP90-205/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_counts_pattern_9.n_379-vs-ZFP90-205.alignment counts-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/neg_patterns.ENCSR201DCF_ChIP_ZFP91_K562_ENCSR493AYF_counts_pattern_0.n_47-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/neg_patterns.ENCSR201DCF_ChIP_ZFP91_K562_ENCSR493AYF_counts_pattern_1.n_37-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/neg_patterns.ENCSR201DCF_ChIP_ZFP91_K562_ENCSR493AYF_counts_pattern_2.n_30-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/neg_patterns.ENCSR201DCF_ChIP_ZFP91_K562_ENCSR493AYF_counts_pattern_3.n_28-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/neg_patterns.ENCSR678KUJ_ChIP_ZFP91_HepG2_ENCSR551SZJ_counts_pattern_0.n_139-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/neg_patterns.ENCSR678KUJ_ChIP_ZFP91_HepG2_ENCSR551SZJ_counts_pattern_1.n_80-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/neg_patterns.ENCSR678KUJ_ChIP_ZFP91_HepG2_ENCSR551SZJ_counts_pattern_2.n_68-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/neg_patterns.ENCSR678KUJ_ChIP_ZFP91_HepG2_ENCSR551SZJ_counts_pattern_3.n_51-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/neg_patterns.ENCSR678KUJ_ChIP_ZFP91_HepG2_ENCSR551SZJ_counts_pattern_4.n_49-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/neg_patterns.ENCSR678KUJ_ChIP_ZFP91_HepG2_ENCSR551SZJ_counts_pattern_5.n_37-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/neg_patterns.ENCSR678KUJ_ChIP_ZFP91_HepG2_ENCSR551SZJ_counts_pattern_6.n_37-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/neg_patterns.ENCSR678KUJ_ChIP_ZFP91_HepG2_ENCSR551SZJ_counts_pattern_7.n_32-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/neg_patterns.ENCSR678KUJ_ChIP_ZFP91_HepG2_ENCSR551SZJ_counts_pattern_8.n_23-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/neg_patterns.ENCSR678KUJ_ChIP_ZFP91_HepG2_ENCSR551SZJ_counts_pattern_9.n_22-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/neg_patterns.ENCSR898XMH_ChIP_ZFP91_K562_ENCSR673ZFH_counts_pattern_0.n_37-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/neg_patterns.ENCSR898XMH_ChIP_ZFP91_K562_ENCSR673ZFH_counts_pattern_1.n_36-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/neg_patterns.ENCSR898XMH_ChIP_ZFP91_K562_ENCSR673ZFH_counts_pattern_2.n_34-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/neg_patterns.ENCSR898XMH_ChIP_ZFP91_K562_ENCSR673ZFH_counts_pattern_3.n_32-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/neg_patterns.ENCSR898XMH_ChIP_ZFP91_K562_ENCSR673ZFH_counts_pattern_4.n_30-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/neg_patterns.ENCSR898XMH_ChIP_ZFP91_K562_ENCSR673ZFH_counts_pattern_5.n_24-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/neg_patterns.ENCSR898XMH_ChIP_ZFP91_K562_ENCSR673ZFH_counts_pattern_6.n_23-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/neg_patterns.ENCSR898XMH_ChIP_ZFP91_K562_ENCSR673ZFH_counts_pattern_7.n_23-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR201DCF_ChIP_ZFP91_K562_ENCSR493AYF_counts_pattern_0.n_1956-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR201DCF_ChIP_ZFP91_K562_ENCSR493AYF_counts_pattern_1.n_40-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR201DCF_ChIP_ZFP91_K562_ENCSR493AYF_counts_pattern_2.n_29-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR678KUJ_ChIP_ZFP91_HepG2_ENCSR551SZJ_counts_pattern_0.n_4060-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR678KUJ_ChIP_ZFP91_HepG2_ENCSR551SZJ_counts_pattern_10.n_323-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR678KUJ_ChIP_ZFP91_HepG2_ENCSR551SZJ_counts_pattern_11.n_251-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR678KUJ_ChIP_ZFP91_HepG2_ENCSR551SZJ_counts_pattern_12.n_207-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR678KUJ_ChIP_ZFP91_HepG2_ENCSR551SZJ_counts_pattern_13.n_104-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR678KUJ_ChIP_ZFP91_HepG2_ENCSR551SZJ_counts_pattern_14.n_73-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR678KUJ_ChIP_ZFP91_HepG2_ENCSR551SZJ_counts_pattern_15.n_53-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR678KUJ_ChIP_ZFP91_HepG2_ENCSR551SZJ_counts_pattern_16.n_51-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR678KUJ_ChIP_ZFP91_HepG2_ENCSR551SZJ_counts_pattern_17.n_40-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR678KUJ_ChIP_ZFP91_HepG2_ENCSR551SZJ_counts_pattern_1.n_3931-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR678KUJ_ChIP_ZFP91_HepG2_ENCSR551SZJ_counts_pattern_2.n_3161-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR678KUJ_ChIP_ZFP91_HepG2_ENCSR551SZJ_counts_pattern_3.n_2885-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR678KUJ_ChIP_ZFP91_HepG2_ENCSR551SZJ_counts_pattern_4.n_2724-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR678KUJ_ChIP_ZFP91_HepG2_ENCSR551SZJ_counts_pattern_5.n_2420-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR678KUJ_ChIP_ZFP91_HepG2_ENCSR551SZJ_counts_pattern_6.n_1379-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR678KUJ_ChIP_ZFP91_HepG2_ENCSR551SZJ_counts_pattern_7.n_1096-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR678KUJ_ChIP_ZFP91_HepG2_ENCSR551SZJ_counts_pattern_8.n_780-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR678KUJ_ChIP_ZFP91_HepG2_ENCSR551SZJ_counts_pattern_9.n_425-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR898XMH_ChIP_ZFP91_K562_ENCSR673ZFH_counts_pattern_0.n_6562-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR898XMH_ChIP_ZFP91_K562_ENCSR673ZFH_counts_pattern_10.n_43-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR898XMH_ChIP_ZFP91_K562_ENCSR673ZFH_counts_pattern_11.n_30-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR898XMH_ChIP_ZFP91_K562_ENCSR673ZFH_counts_pattern_12.n_28-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR898XMH_ChIP_ZFP91_K562_ENCSR673ZFH_counts_pattern_1.n_2928-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR898XMH_ChIP_ZFP91_K562_ENCSR673ZFH_counts_pattern_2.n_1244-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR898XMH_ChIP_ZFP91_K562_ENCSR673ZFH_counts_pattern_3.n_382-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR898XMH_ChIP_ZFP91_K562_ENCSR673ZFH_counts_pattern_4.n_317-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR898XMH_ChIP_ZFP91_K562_ENCSR673ZFH_counts_pattern_5.n_287-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR898XMH_ChIP_ZFP91_K562_ENCSR673ZFH_counts_pattern_6.n_205-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR898XMH_ChIP_ZFP91_K562_ENCSR673ZFH_counts_pattern_7.n_193-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR898XMH_ChIP_ZFP91_K562_ENCSR673ZFH_counts_pattern_8.n_152-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR898XMH_ChIP_ZFP91_K562_ENCSR673ZFH_counts_pattern_9.n_80-vs-ZFP91-201.alignment counts-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFY-201/pos_patterns.ENCSR949OEV_ChIP_ZFY_HepG2_ENCSR132EJY_counts_pattern_0.n_18247-vs-ZFY-201.alignment counts-znf_b1h_alignment/ZFY-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFY-201/pos_patterns.ENCSR949OEV_ChIP_ZFY_HepG2_ENCSR132EJY_counts_pattern_10.n_111-vs-ZFY-201.alignment counts-znf_b1h_alignment/ZFY-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFY-201/pos_patterns.ENCSR949OEV_ChIP_ZFY_HepG2_ENCSR132EJY_counts_pattern_11.n_90-vs-ZFY-201.alignment counts-znf_b1h_alignment/ZFY-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFY-201/pos_patterns.ENCSR949OEV_ChIP_ZFY_HepG2_ENCSR132EJY_counts_pattern_12.n_57-vs-ZFY-201.alignment counts-znf_b1h_alignment/ZFY-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFY-201/pos_patterns.ENCSR949OEV_ChIP_ZFY_HepG2_ENCSR132EJY_counts_pattern_13.n_41-vs-ZFY-201.alignment counts-znf_b1h_alignment/ZFY-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFY-201/pos_patterns.ENCSR949OEV_ChIP_ZFY_HepG2_ENCSR132EJY_counts_pattern_14.n_26-vs-ZFY-201.alignment counts-znf_b1h_alignment/ZFY-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFY-201/pos_patterns.ENCSR949OEV_ChIP_ZFY_HepG2_ENCSR132EJY_counts_pattern_1.n_921-vs-ZFY-201.alignment counts-znf_b1h_alignment/ZFY-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFY-201/pos_patterns.ENCSR949OEV_ChIP_ZFY_HepG2_ENCSR132EJY_counts_pattern_2.n_787-vs-ZFY-201.alignment counts-znf_b1h_alignment/ZFY-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFY-201/pos_patterns.ENCSR949OEV_ChIP_ZFY_HepG2_ENCSR132EJY_counts_pattern_3.n_756-vs-ZFY-201.alignment counts-znf_b1h_alignment/ZFY-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFY-201/pos_patterns.ENCSR949OEV_ChIP_ZFY_HepG2_ENCSR132EJY_counts_pattern_4.n_711-vs-ZFY-201.alignment counts-znf_b1h_alignment/ZFY-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFY-201/pos_patterns.ENCSR949OEV_ChIP_ZFY_HepG2_ENCSR132EJY_counts_pattern_5.n_594-vs-ZFY-201.alignment counts-znf_b1h_alignment/ZFY-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFY-201/pos_patterns.ENCSR949OEV_ChIP_ZFY_HepG2_ENCSR132EJY_counts_pattern_6.n_321-vs-ZFY-201.alignment counts-znf_b1h_alignment/ZFY-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFY-201/pos_patterns.ENCSR949OEV_ChIP_ZFY_HepG2_ENCSR132EJY_counts_pattern_7.n_175-vs-ZFY-201.alignment counts-znf_b1h_alignment/ZFY-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFY-201/pos_patterns.ENCSR949OEV_ChIP_ZFY_HepG2_ENCSR132EJY_counts_pattern_8.n_112-vs-ZFY-201.alignment counts-znf_b1h_alignment/ZFY-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZFY-201/pos_patterns.ENCSR949OEV_ChIP_ZFY_HepG2_ENCSR132EJY_counts_pattern_9.n_111-vs-ZFY-201.alignment counts-znf_b1h_alignment/ZFY-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR557RVF_ChIP_ZHX1_K562_ENCSR483ZEI_counts_pattern_0.n_505-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR557RVF_ChIP_ZHX1_K562_ENCSR483ZEI_counts_pattern_10.n_53-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR557RVF_ChIP_ZHX1_K562_ENCSR483ZEI_counts_pattern_11.n_39-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR557RVF_ChIP_ZHX1_K562_ENCSR483ZEI_counts_pattern_12.n_29-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR557RVF_ChIP_ZHX1_K562_ENCSR483ZEI_counts_pattern_13.n_27-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR557RVF_ChIP_ZHX1_K562_ENCSR483ZEI_counts_pattern_14.n_21-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR557RVF_ChIP_ZHX1_K562_ENCSR483ZEI_counts_pattern_1.n_450-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR557RVF_ChIP_ZHX1_K562_ENCSR483ZEI_counts_pattern_2.n_438-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR557RVF_ChIP_ZHX1_K562_ENCSR483ZEI_counts_pattern_3.n_213-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR557RVF_ChIP_ZHX1_K562_ENCSR483ZEI_counts_pattern_4.n_196-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR557RVF_ChIP_ZHX1_K562_ENCSR483ZEI_counts_pattern_5.n_145-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR557RVF_ChIP_ZHX1_K562_ENCSR483ZEI_counts_pattern_6.n_127-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR557RVF_ChIP_ZHX1_K562_ENCSR483ZEI_counts_pattern_7.n_119-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR557RVF_ChIP_ZHX1_K562_ENCSR483ZEI_counts_pattern_8.n_66-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR557RVF_ChIP_ZHX1_K562_ENCSR483ZEI_counts_pattern_9.n_58-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR887MXT_ChIP_ZHX1_HeLa-S3_ENCSR813OAN_counts_pattern_0.n_1110-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR887MXT_ChIP_ZHX1_HeLa-S3_ENCSR813OAN_counts_pattern_10.n_41-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR887MXT_ChIP_ZHX1_HeLa-S3_ENCSR813OAN_counts_pattern_1.n_789-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR887MXT_ChIP_ZHX1_HeLa-S3_ENCSR813OAN_counts_pattern_2.n_717-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR887MXT_ChIP_ZHX1_HeLa-S3_ENCSR813OAN_counts_pattern_3.n_344-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR887MXT_ChIP_ZHX1_HeLa-S3_ENCSR813OAN_counts_pattern_4.n_181-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR887MXT_ChIP_ZHX1_HeLa-S3_ENCSR813OAN_counts_pattern_5.n_116-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR887MXT_ChIP_ZHX1_HeLa-S3_ENCSR813OAN_counts_pattern_6.n_99-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR887MXT_ChIP_ZHX1_HeLa-S3_ENCSR813OAN_counts_pattern_7.n_86-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR887MXT_ChIP_ZHX1_HeLa-S3_ENCSR813OAN_counts_pattern_8.n_68-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR887MXT_ChIP_ZHX1_HeLa-S3_ENCSR813OAN_counts_pattern_9.n_65-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR978DQT_ChIP_ZHX1_HepG2_ENCSR930QQH_counts_pattern_0.n_1803-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR978DQT_ChIP_ZHX1_HepG2_ENCSR930QQH_counts_pattern_10.n_303-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR978DQT_ChIP_ZHX1_HepG2_ENCSR930QQH_counts_pattern_11.n_278-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR978DQT_ChIP_ZHX1_HepG2_ENCSR930QQH_counts_pattern_12.n_257-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR978DQT_ChIP_ZHX1_HepG2_ENCSR930QQH_counts_pattern_13.n_245-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR978DQT_ChIP_ZHX1_HepG2_ENCSR930QQH_counts_pattern_14.n_195-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR978DQT_ChIP_ZHX1_HepG2_ENCSR930QQH_counts_pattern_15.n_184-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR978DQT_ChIP_ZHX1_HepG2_ENCSR930QQH_counts_pattern_16.n_152-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR978DQT_ChIP_ZHX1_HepG2_ENCSR930QQH_counts_pattern_17.n_148-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR978DQT_ChIP_ZHX1_HepG2_ENCSR930QQH_counts_pattern_18.n_83-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR978DQT_ChIP_ZHX1_HepG2_ENCSR930QQH_counts_pattern_19.n_80-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR978DQT_ChIP_ZHX1_HepG2_ENCSR930QQH_counts_pattern_1.n_1231-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR978DQT_ChIP_ZHX1_HepG2_ENCSR930QQH_counts_pattern_20.n_50-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR978DQT_ChIP_ZHX1_HepG2_ENCSR930QQH_counts_pattern_2.n_1139-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR978DQT_ChIP_ZHX1_HepG2_ENCSR930QQH_counts_pattern_3.n_919-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR978DQT_ChIP_ZHX1_HepG2_ENCSR930QQH_counts_pattern_4.n_625-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR978DQT_ChIP_ZHX1_HepG2_ENCSR930QQH_counts_pattern_5.n_510-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR978DQT_ChIP_ZHX1_HepG2_ENCSR930QQH_counts_pattern_6.n_383-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR978DQT_ChIP_ZHX1_HepG2_ENCSR930QQH_counts_pattern_7.n_376-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR978DQT_ChIP_ZHX1_HepG2_ENCSR930QQH_counts_pattern_8.n_353-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX1-201/pos_patterns.ENCSR978DQT_ChIP_ZHX1_HepG2_ENCSR930QQH_counts_pattern_9.n_341-vs-ZHX1-201.alignment counts-znf_b1h_alignment/ZHX1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX2-201/pos_patterns.ENCSR401VBM_ChIP_ZHX2_HepG2_ENCSR785ULR_counts_pattern_0.n_2200-vs-ZHX2-201.alignment counts-znf_b1h_alignment/ZHX2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX2-201/pos_patterns.ENCSR401VBM_ChIP_ZHX2_HepG2_ENCSR785ULR_counts_pattern_10.n_82-vs-ZHX2-201.alignment counts-znf_b1h_alignment/ZHX2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX2-201/pos_patterns.ENCSR401VBM_ChIP_ZHX2_HepG2_ENCSR785ULR_counts_pattern_11.n_50-vs-ZHX2-201.alignment counts-znf_b1h_alignment/ZHX2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX2-201/pos_patterns.ENCSR401VBM_ChIP_ZHX2_HepG2_ENCSR785ULR_counts_pattern_1.n_1140-vs-ZHX2-201.alignment counts-znf_b1h_alignment/ZHX2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX2-201/pos_patterns.ENCSR401VBM_ChIP_ZHX2_HepG2_ENCSR785ULR_counts_pattern_2.n_836-vs-ZHX2-201.alignment counts-znf_b1h_alignment/ZHX2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX2-201/pos_patterns.ENCSR401VBM_ChIP_ZHX2_HepG2_ENCSR785ULR_counts_pattern_3.n_289-vs-ZHX2-201.alignment counts-znf_b1h_alignment/ZHX2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX2-201/pos_patterns.ENCSR401VBM_ChIP_ZHX2_HepG2_ENCSR785ULR_counts_pattern_4.n_187-vs-ZHX2-201.alignment counts-znf_b1h_alignment/ZHX2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX2-201/pos_patterns.ENCSR401VBM_ChIP_ZHX2_HepG2_ENCSR785ULR_counts_pattern_5.n_168-vs-ZHX2-201.alignment counts-znf_b1h_alignment/ZHX2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX2-201/pos_patterns.ENCSR401VBM_ChIP_ZHX2_HepG2_ENCSR785ULR_counts_pattern_6.n_146-vs-ZHX2-201.alignment counts-znf_b1h_alignment/ZHX2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX2-201/pos_patterns.ENCSR401VBM_ChIP_ZHX2_HepG2_ENCSR785ULR_counts_pattern_7.n_121-vs-ZHX2-201.alignment counts-znf_b1h_alignment/ZHX2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX2-201/pos_patterns.ENCSR401VBM_ChIP_ZHX2_HepG2_ENCSR785ULR_counts_pattern_8.n_111-vs-ZHX2-201.alignment counts-znf_b1h_alignment/ZHX2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX2-201/pos_patterns.ENCSR401VBM_ChIP_ZHX2_HepG2_ENCSR785ULR_counts_pattern_9.n_104-vs-ZHX2-201.alignment counts-znf_b1h_alignment/ZHX2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX2-201/pos_patterns.ENCSR407BEZ_ChIP_ZHX2_HepG2_ENCSR003HGY_counts_pattern_0.n_2365-vs-ZHX2-201.alignment counts-znf_b1h_alignment/ZHX2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX2-201/pos_patterns.ENCSR407BEZ_ChIP_ZHX2_HepG2_ENCSR003HGY_counts_pattern_10.n_85-vs-ZHX2-201.alignment counts-znf_b1h_alignment/ZHX2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX2-201/pos_patterns.ENCSR407BEZ_ChIP_ZHX2_HepG2_ENCSR003HGY_counts_pattern_11.n_62-vs-ZHX2-201.alignment counts-znf_b1h_alignment/ZHX2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX2-201/pos_patterns.ENCSR407BEZ_ChIP_ZHX2_HepG2_ENCSR003HGY_counts_pattern_12.n_52-vs-ZHX2-201.alignment counts-znf_b1h_alignment/ZHX2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX2-201/pos_patterns.ENCSR407BEZ_ChIP_ZHX2_HepG2_ENCSR003HGY_counts_pattern_13.n_52-vs-ZHX2-201.alignment counts-znf_b1h_alignment/ZHX2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX2-201/pos_patterns.ENCSR407BEZ_ChIP_ZHX2_HepG2_ENCSR003HGY_counts_pattern_14.n_48-vs-ZHX2-201.alignment counts-znf_b1h_alignment/ZHX2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX2-201/pos_patterns.ENCSR407BEZ_ChIP_ZHX2_HepG2_ENCSR003HGY_counts_pattern_15.n_45-vs-ZHX2-201.alignment counts-znf_b1h_alignment/ZHX2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX2-201/pos_patterns.ENCSR407BEZ_ChIP_ZHX2_HepG2_ENCSR003HGY_counts_pattern_16.n_43-vs-ZHX2-201.alignment counts-znf_b1h_alignment/ZHX2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX2-201/pos_patterns.ENCSR407BEZ_ChIP_ZHX2_HepG2_ENCSR003HGY_counts_pattern_17.n_35-vs-ZHX2-201.alignment counts-znf_b1h_alignment/ZHX2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX2-201/pos_patterns.ENCSR407BEZ_ChIP_ZHX2_HepG2_ENCSR003HGY_counts_pattern_1.n_1686-vs-ZHX2-201.alignment counts-znf_b1h_alignment/ZHX2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX2-201/pos_patterns.ENCSR407BEZ_ChIP_ZHX2_HepG2_ENCSR003HGY_counts_pattern_2.n_745-vs-ZHX2-201.alignment counts-znf_b1h_alignment/ZHX2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX2-201/pos_patterns.ENCSR407BEZ_ChIP_ZHX2_HepG2_ENCSR003HGY_counts_pattern_3.n_197-vs-ZHX2-201.alignment counts-znf_b1h_alignment/ZHX2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX2-201/pos_patterns.ENCSR407BEZ_ChIP_ZHX2_HepG2_ENCSR003HGY_counts_pattern_4.n_163-vs-ZHX2-201.alignment counts-znf_b1h_alignment/ZHX2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX2-201/pos_patterns.ENCSR407BEZ_ChIP_ZHX2_HepG2_ENCSR003HGY_counts_pattern_5.n_159-vs-ZHX2-201.alignment counts-znf_b1h_alignment/ZHX2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX2-201/pos_patterns.ENCSR407BEZ_ChIP_ZHX2_HepG2_ENCSR003HGY_counts_pattern_6.n_152-vs-ZHX2-201.alignment counts-znf_b1h_alignment/ZHX2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX2-201/pos_patterns.ENCSR407BEZ_ChIP_ZHX2_HepG2_ENCSR003HGY_counts_pattern_7.n_117-vs-ZHX2-201.alignment counts-znf_b1h_alignment/ZHX2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX2-201/pos_patterns.ENCSR407BEZ_ChIP_ZHX2_HepG2_ENCSR003HGY_counts_pattern_8.n_112-vs-ZHX2-201.alignment counts-znf_b1h_alignment/ZHX2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX2-201/pos_patterns.ENCSR407BEZ_ChIP_ZHX2_HepG2_ENCSR003HGY_counts_pattern_9.n_97-vs-ZHX2-201.alignment counts-znf_b1h_alignment/ZHX2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX2-201/pos_patterns.ENCSR876UYH_ChIP_ZHX2_MCF-7_ENCSR508KFE_counts_pattern_0.n_1678-vs-ZHX2-201.alignment counts-znf_b1h_alignment/ZHX2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX2-201/pos_patterns.ENCSR876UYH_ChIP_ZHX2_MCF-7_ENCSR508KFE_counts_pattern_1.n_1420-vs-ZHX2-201.alignment counts-znf_b1h_alignment/ZHX2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX2-201/pos_patterns.ENCSR876UYH_ChIP_ZHX2_MCF-7_ENCSR508KFE_counts_pattern_2.n_1255-vs-ZHX2-201.alignment counts-znf_b1h_alignment/ZHX2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX2-201/pos_patterns.ENCSR876UYH_ChIP_ZHX2_MCF-7_ENCSR508KFE_counts_pattern_3.n_463-vs-ZHX2-201.alignment counts-znf_b1h_alignment/ZHX2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX2-201/pos_patterns.ENCSR876UYH_ChIP_ZHX2_MCF-7_ENCSR508KFE_counts_pattern_4.n_148-vs-ZHX2-201.alignment counts-znf_b1h_alignment/ZHX2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX2-201/pos_patterns.ENCSR876UYH_ChIP_ZHX2_MCF-7_ENCSR508KFE_counts_pattern_5.n_48-vs-ZHX2-201.alignment counts-znf_b1h_alignment/ZHX2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX2-201/pos_patterns.ENCSR876UYH_ChIP_ZHX2_MCF-7_ENCSR508KFE_counts_pattern_6.n_45-vs-ZHX2-201.alignment counts-znf_b1h_alignment/ZHX2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX3-201/pos_patterns.ENCSR367KYL_ChIP_ZHX3_HepG2_ENCSR129XQD_counts_pattern_0.n_1032-vs-ZHX3-201.alignment counts-znf_b1h_alignment/ZHX3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX3-201/pos_patterns.ENCSR367KYL_ChIP_ZHX3_HepG2_ENCSR129XQD_counts_pattern_10.n_187-vs-ZHX3-201.alignment counts-znf_b1h_alignment/ZHX3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX3-201/pos_patterns.ENCSR367KYL_ChIP_ZHX3_HepG2_ENCSR129XQD_counts_pattern_11.n_177-vs-ZHX3-201.alignment counts-znf_b1h_alignment/ZHX3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX3-201/pos_patterns.ENCSR367KYL_ChIP_ZHX3_HepG2_ENCSR129XQD_counts_pattern_12.n_129-vs-ZHX3-201.alignment counts-znf_b1h_alignment/ZHX3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX3-201/pos_patterns.ENCSR367KYL_ChIP_ZHX3_HepG2_ENCSR129XQD_counts_pattern_13.n_110-vs-ZHX3-201.alignment counts-znf_b1h_alignment/ZHX3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX3-201/pos_patterns.ENCSR367KYL_ChIP_ZHX3_HepG2_ENCSR129XQD_counts_pattern_14.n_34-vs-ZHX3-201.alignment counts-znf_b1h_alignment/ZHX3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX3-201/pos_patterns.ENCSR367KYL_ChIP_ZHX3_HepG2_ENCSR129XQD_counts_pattern_1.n_782-vs-ZHX3-201.alignment counts-znf_b1h_alignment/ZHX3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX3-201/pos_patterns.ENCSR367KYL_ChIP_ZHX3_HepG2_ENCSR129XQD_counts_pattern_2.n_597-vs-ZHX3-201.alignment counts-znf_b1h_alignment/ZHX3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX3-201/pos_patterns.ENCSR367KYL_ChIP_ZHX3_HepG2_ENCSR129XQD_counts_pattern_3.n_354-vs-ZHX3-201.alignment counts-znf_b1h_alignment/ZHX3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX3-201/pos_patterns.ENCSR367KYL_ChIP_ZHX3_HepG2_ENCSR129XQD_counts_pattern_4.n_335-vs-ZHX3-201.alignment counts-znf_b1h_alignment/ZHX3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX3-201/pos_patterns.ENCSR367KYL_ChIP_ZHX3_HepG2_ENCSR129XQD_counts_pattern_5.n_314-vs-ZHX3-201.alignment counts-znf_b1h_alignment/ZHX3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX3-201/pos_patterns.ENCSR367KYL_ChIP_ZHX3_HepG2_ENCSR129XQD_counts_pattern_6.n_289-vs-ZHX3-201.alignment counts-znf_b1h_alignment/ZHX3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX3-201/pos_patterns.ENCSR367KYL_ChIP_ZHX3_HepG2_ENCSR129XQD_counts_pattern_7.n_280-vs-ZHX3-201.alignment counts-znf_b1h_alignment/ZHX3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX3-201/pos_patterns.ENCSR367KYL_ChIP_ZHX3_HepG2_ENCSR129XQD_counts_pattern_8.n_272-vs-ZHX3-201.alignment counts-znf_b1h_alignment/ZHX3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZHX3-201/pos_patterns.ENCSR367KYL_ChIP_ZHX3_HepG2_ENCSR129XQD_counts_pattern_9.n_227-vs-ZHX3-201.alignment counts-znf_b1h_alignment/ZHX3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZIC2-201/Hughes_NB_models_ZIC2_counts-pos.pattern_0.n_1100-vs-ZIC2-201.alignment counts-znf_b1h_alignment/ZIC2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZIC2-201/Hughes_NB_models_ZIC2_counts-pos.pattern_1.n_557-vs-ZIC2-201.alignment counts-znf_b1h_alignment/ZIC2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZIC2-201/pos_patterns.ENCSR728MWW_ChIP_ZIC2_HEK293_ENCSR084MUM_counts_pattern_0.n_35799-vs-ZIC2-201.alignment counts-znf_b1h_alignment/ZIC2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZIC2-201/pos_patterns.ENCSR728MWW_ChIP_ZIC2_HEK293_ENCSR084MUM_counts_pattern_1.n_1085-vs-ZIC2-201.alignment counts-znf_b1h_alignment/ZIC2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZIC2-201/pos_patterns.ENCSR728MWW_ChIP_ZIC2_HEK293_ENCSR084MUM_counts_pattern_2.n_480-vs-ZIC2-201.alignment counts-znf_b1h_alignment/ZIC2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZIC2-201/pos_patterns.ENCSR728MWW_ChIP_ZIC2_HEK293_ENCSR084MUM_counts_pattern_3.n_51-vs-ZIC2-201.alignment counts-znf_b1h_alignment/ZIC2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZIC2-201/pos_patterns.ENCSR728MWW_ChIP_ZIC2_HEK293_ENCSR084MUM_counts_pattern_4.n_35-vs-ZIC2-201.alignment counts-znf_b1h_alignment/ZIC2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZIC2-201/pos_patterns.ENCSR728MWW_ChIP_ZIC2_HEK293_ENCSR084MUM_counts_pattern_5.n_20-vs-ZIC2-201.alignment counts-znf_b1h_alignment/ZIC2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZIK1-201/ChipExo_models_ZIK1_counts-pos.pattern_0.n_245-vs-ZIK1-201.alignment counts-znf_b1h_alignment/ZIK1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZIK1-201/ChipExo_models_ZIK1_counts-pos.pattern_1.n_37-vs-ZIK1-201.alignment counts-znf_b1h_alignment/ZIK1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZIK1-201/ChipExo_models_ZIK1_counts-pos.pattern_2.n_34-vs-ZIK1-201.alignment counts-znf_b1h_alignment/ZIK1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZIK1-201/pos_patterns.ENCSR862VDD_ChIP_ZIK1_HepG2_ENCSR604DQS_counts_pattern_0.n_1892-vs-ZIK1-201.alignment counts-znf_b1h_alignment/ZIK1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZIK1-201/pos_patterns.ENCSR862VDD_ChIP_ZIK1_HepG2_ENCSR604DQS_counts_pattern_10.n_204-vs-ZIK1-201.alignment counts-znf_b1h_alignment/ZIK1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZIK1-201/pos_patterns.ENCSR862VDD_ChIP_ZIK1_HepG2_ENCSR604DQS_counts_pattern_11.n_191-vs-ZIK1-201.alignment counts-znf_b1h_alignment/ZIK1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZIK1-201/pos_patterns.ENCSR862VDD_ChIP_ZIK1_HepG2_ENCSR604DQS_counts_pattern_12.n_189-vs-ZIK1-201.alignment counts-znf_b1h_alignment/ZIK1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZIK1-201/pos_patterns.ENCSR862VDD_ChIP_ZIK1_HepG2_ENCSR604DQS_counts_pattern_13.n_170-vs-ZIK1-201.alignment counts-znf_b1h_alignment/ZIK1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZIK1-201/pos_patterns.ENCSR862VDD_ChIP_ZIK1_HepG2_ENCSR604DQS_counts_pattern_14.n_103-vs-ZIK1-201.alignment counts-znf_b1h_alignment/ZIK1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZIK1-201/pos_patterns.ENCSR862VDD_ChIP_ZIK1_HepG2_ENCSR604DQS_counts_pattern_15.n_83-vs-ZIK1-201.alignment counts-znf_b1h_alignment/ZIK1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZIK1-201/pos_patterns.ENCSR862VDD_ChIP_ZIK1_HepG2_ENCSR604DQS_counts_pattern_16.n_81-vs-ZIK1-201.alignment counts-znf_b1h_alignment/ZIK1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZIK1-201/pos_patterns.ENCSR862VDD_ChIP_ZIK1_HepG2_ENCSR604DQS_counts_pattern_17.n_62-vs-ZIK1-201.alignment counts-znf_b1h_alignment/ZIK1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZIK1-201/pos_patterns.ENCSR862VDD_ChIP_ZIK1_HepG2_ENCSR604DQS_counts_pattern_18.n_31-vs-ZIK1-201.alignment counts-znf_b1h_alignment/ZIK1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZIK1-201/pos_patterns.ENCSR862VDD_ChIP_ZIK1_HepG2_ENCSR604DQS_counts_pattern_1.n_1465-vs-ZIK1-201.alignment counts-znf_b1h_alignment/ZIK1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZIK1-201/pos_patterns.ENCSR862VDD_ChIP_ZIK1_HepG2_ENCSR604DQS_counts_pattern_2.n_1409-vs-ZIK1-201.alignment counts-znf_b1h_alignment/ZIK1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZIK1-201/pos_patterns.ENCSR862VDD_ChIP_ZIK1_HepG2_ENCSR604DQS_counts_pattern_3.n_1406-vs-ZIK1-201.alignment counts-znf_b1h_alignment/ZIK1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZIK1-201/pos_patterns.ENCSR862VDD_ChIP_ZIK1_HepG2_ENCSR604DQS_counts_pattern_4.n_418-vs-ZIK1-201.alignment counts-znf_b1h_alignment/ZIK1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZIK1-201/pos_patterns.ENCSR862VDD_ChIP_ZIK1_HepG2_ENCSR604DQS_counts_pattern_5.n_412-vs-ZIK1-201.alignment counts-znf_b1h_alignment/ZIK1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZIK1-201/pos_patterns.ENCSR862VDD_ChIP_ZIK1_HepG2_ENCSR604DQS_counts_pattern_6.n_356-vs-ZIK1-201.alignment counts-znf_b1h_alignment/ZIK1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZIK1-201/pos_patterns.ENCSR862VDD_ChIP_ZIK1_HepG2_ENCSR604DQS_counts_pattern_7.n_263-vs-ZIK1-201.alignment counts-znf_b1h_alignment/ZIK1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZIK1-201/pos_patterns.ENCSR862VDD_ChIP_ZIK1_HepG2_ENCSR604DQS_counts_pattern_8.n_224-vs-ZIK1-201.alignment counts-znf_b1h_alignment/ZIK1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZIK1-201/pos_patterns.ENCSR862VDD_ChIP_ZIK1_HepG2_ENCSR604DQS_counts_pattern_9.n_212-vs-ZIK1-201.alignment counts-znf_b1h_alignment/ZIK1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZIM3-201/ChipExo_models_ZIM3_counts-pos.pattern_0.n_23485-vs-ZIM3-201.alignment counts-znf_b1h_alignment/ZIM3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZIM3-201/Hughes_GR_models_ZIM3_counts-neg.pattern_0.n_250-vs-ZIM3-201.alignment counts-znf_b1h_alignment/ZIM3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZIM3-201/Hughes_GR_models_ZIM3_counts-neg.pattern_1.n_95-vs-ZIM3-201.alignment counts-znf_b1h_alignment/ZIM3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZIM3-201/Hughes_GR_models_ZIM3_counts-neg.pattern_2.n_59-vs-ZIM3-201.alignment counts-znf_b1h_alignment/ZIM3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZIM3-201/Hughes_GR_models_ZIM3_counts-neg.pattern_3.n_56-vs-ZIM3-201.alignment counts-znf_b1h_alignment/ZIM3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZIM3-201/Hughes_GR_models_ZIM3_counts-neg.pattern_4.n_55-vs-ZIM3-201.alignment counts-znf_b1h_alignment/ZIM3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZIM3-201/Hughes_GR_models_ZIM3_counts-neg.pattern_5.n_27-vs-ZIM3-201.alignment counts-znf_b1h_alignment/ZIM3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZIM3-201/Hughes_GR_models_ZIM3_counts-neg.pattern_6.n_22-vs-ZIM3-201.alignment counts-znf_b1h_alignment/ZIM3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZIM3-201/Hughes_GR_models_ZIM3_counts-pos.pattern_0.n_14014-vs-ZIM3-201.alignment counts-znf_b1h_alignment/ZIM3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN1-201/pos_patterns.ENCSR000ECJ_ChIP_ZKSCAN1_HeLa-S3_ENCSR467JKG_counts_pattern_0.n_1896-vs-ZKSCAN1-201.alignment counts-znf_b1h_alignment/ZKSCAN1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN1-201/pos_patterns.ENCSR000ECJ_ChIP_ZKSCAN1_HeLa-S3_ENCSR467JKG_counts_pattern_1.n_175-vs-ZKSCAN1-201.alignment counts-znf_b1h_alignment/ZKSCAN1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN1-201/pos_patterns.ENCSR000ECJ_ChIP_ZKSCAN1_HeLa-S3_ENCSR467JKG_counts_pattern_2.n_120-vs-ZKSCAN1-201.alignment counts-znf_b1h_alignment/ZKSCAN1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN1-201/pos_patterns.ENCSR000ECJ_ChIP_ZKSCAN1_HeLa-S3_ENCSR467JKG_counts_pattern_3.n_33-vs-ZKSCAN1-201.alignment counts-znf_b1h_alignment/ZKSCAN1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN1-201/pos_patterns.ENCSR000ECJ_ChIP_ZKSCAN1_HeLa-S3_ENCSR467JKG_counts_pattern_4.n_30-vs-ZKSCAN1-201.alignment counts-znf_b1h_alignment/ZKSCAN1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN1-201/pos_patterns.ENCSR157CAU_ChIP_ZKSCAN1_HepG2_ENCSR865HSG_counts_pattern_0.n_4429-vs-ZKSCAN1-201.alignment counts-znf_b1h_alignment/ZKSCAN1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN1-201/pos_patterns.ENCSR157CAU_ChIP_ZKSCAN1_HepG2_ENCSR865HSG_counts_pattern_1.n_1116-vs-ZKSCAN1-201.alignment counts-znf_b1h_alignment/ZKSCAN1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN1-201/pos_patterns.ENCSR157CAU_ChIP_ZKSCAN1_HepG2_ENCSR865HSG_counts_pattern_2.n_236-vs-ZKSCAN1-201.alignment counts-znf_b1h_alignment/ZKSCAN1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN1-201/pos_patterns.ENCSR157CAU_ChIP_ZKSCAN1_HepG2_ENCSR865HSG_counts_pattern_3.n_141-vs-ZKSCAN1-201.alignment counts-znf_b1h_alignment/ZKSCAN1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN1-201/pos_patterns.ENCSR157CAU_ChIP_ZKSCAN1_HepG2_ENCSR865HSG_counts_pattern_4.n_65-vs-ZKSCAN1-201.alignment counts-znf_b1h_alignment/ZKSCAN1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN1-201/pos_patterns.ENCSR157CAU_ChIP_ZKSCAN1_HepG2_ENCSR865HSG_counts_pattern_5.n_34-vs-ZKSCAN1-201.alignment counts-znf_b1h_alignment/ZKSCAN1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN1-201/pos_patterns.ENCSR157CAU_ChIP_ZKSCAN1_HepG2_ENCSR865HSG_counts_pattern_6.n_28-vs-ZKSCAN1-201.alignment counts-znf_b1h_alignment/ZKSCAN1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN1-201/pos_patterns.ENCSR157CAU_ChIP_ZKSCAN1_HepG2_ENCSR865HSG_counts_pattern_7.n_22-vs-ZKSCAN1-201.alignment counts-znf_b1h_alignment/ZKSCAN1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN1-201/pos_patterns.ENCSR449UFF_ChIP_ZKSCAN1_MCF-7_ENCSR836IBM_counts_pattern_0.n_1164-vs-ZKSCAN1-201.alignment counts-znf_b1h_alignment/ZKSCAN1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN1-201/pos_patterns.ENCSR449UFF_ChIP_ZKSCAN1_MCF-7_ENCSR836IBM_counts_pattern_1.n_412-vs-ZKSCAN1-201.alignment counts-znf_b1h_alignment/ZKSCAN1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN1-201/pos_patterns.ENCSR449UFF_ChIP_ZKSCAN1_MCF-7_ENCSR836IBM_counts_pattern_2.n_287-vs-ZKSCAN1-201.alignment counts-znf_b1h_alignment/ZKSCAN1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN1-201/pos_patterns.ENCSR449UFF_ChIP_ZKSCAN1_MCF-7_ENCSR836IBM_counts_pattern_3.n_180-vs-ZKSCAN1-201.alignment counts-znf_b1h_alignment/ZKSCAN1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN1-201/pos_patterns.ENCSR449UFF_ChIP_ZKSCAN1_MCF-7_ENCSR836IBM_counts_pattern_4.n_48-vs-ZKSCAN1-201.alignment counts-znf_b1h_alignment/ZKSCAN1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN1-201/pos_patterns.ENCSR882ERE_ChIP_ZKSCAN1_K562_ENCSR392WCU_counts_pattern_0.n_6190-vs-ZKSCAN1-201.alignment counts-znf_b1h_alignment/ZKSCAN1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN1-201/pos_patterns.ENCSR882ERE_ChIP_ZKSCAN1_K562_ENCSR392WCU_counts_pattern_1.n_598-vs-ZKSCAN1-201.alignment counts-znf_b1h_alignment/ZKSCAN1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN1-201/pos_patterns.ENCSR882ERE_ChIP_ZKSCAN1_K562_ENCSR392WCU_counts_pattern_2.n_594-vs-ZKSCAN1-201.alignment counts-znf_b1h_alignment/ZKSCAN1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN1-201/pos_patterns.ENCSR882ERE_ChIP_ZKSCAN1_K562_ENCSR392WCU_counts_pattern_3.n_20-vs-ZKSCAN1-201.alignment counts-znf_b1h_alignment/ZKSCAN1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN2-201/ChipExo_models_ZKSCAN2_counts-neg.pattern_0.n_49-vs-ZKSCAN2-201.alignment counts-znf_b1h_alignment/ZKSCAN2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN2-201/ChipExo_models_ZKSCAN2_counts-neg.pattern_1.n_41-vs-ZKSCAN2-201.alignment counts-znf_b1h_alignment/ZKSCAN2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN2-201/ChipExo_models_ZKSCAN2_counts-neg.pattern_2.n_39-vs-ZKSCAN2-201.alignment counts-znf_b1h_alignment/ZKSCAN2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN2-201/ChipExo_models_ZKSCAN2_counts-pos.pattern_0.n_614-vs-ZKSCAN2-201.alignment counts-znf_b1h_alignment/ZKSCAN2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN2-201/ChipExo_models_ZKSCAN2_counts-pos.pattern_1.n_286-vs-ZKSCAN2-201.alignment counts-znf_b1h_alignment/ZKSCAN2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN2-201/ChipExo_models_ZKSCAN2_counts-pos.pattern_2.n_83-vs-ZKSCAN2-201.alignment counts-znf_b1h_alignment/ZKSCAN2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN2-201/ChipExo_models_ZKSCAN2_counts-pos.pattern_3.n_66-vs-ZKSCAN2-201.alignment counts-znf_b1h_alignment/ZKSCAN2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN2-201/ChipExo_models_ZKSCAN2_counts-pos.pattern_4.n_42-vs-ZKSCAN2-201.alignment counts-znf_b1h_alignment/ZKSCAN2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN2-201/ChipExo_models_ZKSCAN2_counts-pos.pattern_5.n_30-vs-ZKSCAN2-201.alignment counts-znf_b1h_alignment/ZKSCAN2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN2-201/ChipExo_models_ZKSCAN2_counts-pos.pattern_6.n_29-vs-ZKSCAN2-201.alignment counts-znf_b1h_alignment/ZKSCAN2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN3-201/ChipExo_models_ZKSCAN3_counts-pos.pattern_0.n_298-vs-ZKSCAN3-201.alignment counts-znf_b1h_alignment/ZKSCAN3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN3-201/ChipExo_models_ZKSCAN3_counts-pos.pattern_1.n_33-vs-ZKSCAN3-201.alignment counts-znf_b1h_alignment/ZKSCAN3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN3-201/pos_patterns.ENCSR199HGP_ChIP_ZKSCAN3_K562_ENCSR360QZV_counts_pattern_0.n_620-vs-ZKSCAN3-201.alignment counts-znf_b1h_alignment/ZKSCAN3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN3-201/pos_patterns.ENCSR199HGP_ChIP_ZKSCAN3_K562_ENCSR360QZV_counts_pattern_1.n_264-vs-ZKSCAN3-201.alignment counts-znf_b1h_alignment/ZKSCAN3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN3-201/pos_patterns.ENCSR199HGP_ChIP_ZKSCAN3_K562_ENCSR360QZV_counts_pattern_2.n_33-vs-ZKSCAN3-201.alignment counts-znf_b1h_alignment/ZKSCAN3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN5-201/ChipExo_models_ZKSCAN5_counts-pos.pattern_0.n_4858-vs-ZKSCAN5-201.alignment counts-znf_b1h_alignment/ZKSCAN5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN5-201/pos_patterns.ENCSR159BTO_ChIP_ZKSCAN5_HepG2_ENCSR899YIJ_counts_pattern_0.n_3128-vs-ZKSCAN5-201.alignment counts-znf_b1h_alignment/ZKSCAN5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN5-201/pos_patterns.ENCSR159BTO_ChIP_ZKSCAN5_HepG2_ENCSR899YIJ_counts_pattern_1.n_149-vs-ZKSCAN5-201.alignment counts-znf_b1h_alignment/ZKSCAN5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN5-201/pos_patterns.ENCSR159BTO_ChIP_ZKSCAN5_HepG2_ENCSR899YIJ_counts_pattern_2.n_133-vs-ZKSCAN5-201.alignment counts-znf_b1h_alignment/ZKSCAN5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN5-201/pos_patterns.ENCSR159BTO_ChIP_ZKSCAN5_HepG2_ENCSR899YIJ_counts_pattern_3.n_52-vs-ZKSCAN5-201.alignment counts-znf_b1h_alignment/ZKSCAN5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN5-204/ChipExo_models_ZKSCAN5_counts-pos.pattern_0.n_4858-vs-ZKSCAN5-204.alignment counts-znf_b1h_alignment/ZKSCAN5-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN5-204/pos_patterns.ENCSR159BTO_ChIP_ZKSCAN5_HepG2_ENCSR899YIJ_counts_pattern_0.n_3128-vs-ZKSCAN5-204.alignment counts-znf_b1h_alignment/ZKSCAN5-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN5-204/pos_patterns.ENCSR159BTO_ChIP_ZKSCAN5_HepG2_ENCSR899YIJ_counts_pattern_1.n_149-vs-ZKSCAN5-204.alignment counts-znf_b1h_alignment/ZKSCAN5-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN5-204/pos_patterns.ENCSR159BTO_ChIP_ZKSCAN5_HepG2_ENCSR899YIJ_counts_pattern_2.n_133-vs-ZKSCAN5-204.alignment counts-znf_b1h_alignment/ZKSCAN5-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN5-204/pos_patterns.ENCSR159BTO_ChIP_ZKSCAN5_HepG2_ENCSR899YIJ_counts_pattern_3.n_52-vs-ZKSCAN5-204.alignment counts-znf_b1h_alignment/ZKSCAN5-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/neg_patterns.ENCSR448UKK_ChIP_ZKSCAN8_K562_ENCSR648SBK_counts_pattern_0.n_24-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/neg_patterns.ENCSR448UKK_ChIP_ZKSCAN8_K562_ENCSR648SBK_counts_pattern_1.n_20-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR115QIT_ChIP_ZKSCAN8_WTC11_ENCSR847HKK_counts_pattern_0.n_1081-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR115QIT_ChIP_ZKSCAN8_WTC11_ENCSR847HKK_counts_pattern_1.n_418-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR115QIT_ChIP_ZKSCAN8_WTC11_ENCSR847HKK_counts_pattern_2.n_106-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR115QIT_ChIP_ZKSCAN8_WTC11_ENCSR847HKK_counts_pattern_3.n_68-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR115QIT_ChIP_ZKSCAN8_WTC11_ENCSR847HKK_counts_pattern_4.n_38-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR115QIT_ChIP_ZKSCAN8_WTC11_ENCSR847HKK_counts_pattern_5.n_29-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR448UKK_ChIP_ZKSCAN8_K562_ENCSR648SBK_counts_pattern_0.n_3782-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR448UKK_ChIP_ZKSCAN8_K562_ENCSR648SBK_counts_pattern_10.n_39-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR448UKK_ChIP_ZKSCAN8_K562_ENCSR648SBK_counts_pattern_11.n_29-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR448UKK_ChIP_ZKSCAN8_K562_ENCSR648SBK_counts_pattern_12.n_21-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR448UKK_ChIP_ZKSCAN8_K562_ENCSR648SBK_counts_pattern_13.n_21-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR448UKK_ChIP_ZKSCAN8_K562_ENCSR648SBK_counts_pattern_1.n_2605-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR448UKK_ChIP_ZKSCAN8_K562_ENCSR648SBK_counts_pattern_2.n_803-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR448UKK_ChIP_ZKSCAN8_K562_ENCSR648SBK_counts_pattern_3.n_242-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR448UKK_ChIP_ZKSCAN8_K562_ENCSR648SBK_counts_pattern_4.n_158-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR448UKK_ChIP_ZKSCAN8_K562_ENCSR648SBK_counts_pattern_5.n_94-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR448UKK_ChIP_ZKSCAN8_K562_ENCSR648SBK_counts_pattern_6.n_57-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR448UKK_ChIP_ZKSCAN8_K562_ENCSR648SBK_counts_pattern_7.n_51-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR448UKK_ChIP_ZKSCAN8_K562_ENCSR648SBK_counts_pattern_8.n_49-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR448UKK_ChIP_ZKSCAN8_K562_ENCSR648SBK_counts_pattern_9.n_44-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR755CRA_ChIP_ZKSCAN8_K562_ENCSR438CEM_counts_pattern_0.n_745-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR755CRA_ChIP_ZKSCAN8_K562_ENCSR438CEM_counts_pattern_10.n_20-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR755CRA_ChIP_ZKSCAN8_K562_ENCSR438CEM_counts_pattern_1.n_619-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR755CRA_ChIP_ZKSCAN8_K562_ENCSR438CEM_counts_pattern_2.n_459-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR755CRA_ChIP_ZKSCAN8_K562_ENCSR438CEM_counts_pattern_3.n_446-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR755CRA_ChIP_ZKSCAN8_K562_ENCSR438CEM_counts_pattern_4.n_303-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR755CRA_ChIP_ZKSCAN8_K562_ENCSR438CEM_counts_pattern_5.n_168-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR755CRA_ChIP_ZKSCAN8_K562_ENCSR438CEM_counts_pattern_6.n_139-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR755CRA_ChIP_ZKSCAN8_K562_ENCSR438CEM_counts_pattern_7.n_51-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR755CRA_ChIP_ZKSCAN8_K562_ENCSR438CEM_counts_pattern_8.n_30-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR755CRA_ChIP_ZKSCAN8_K562_ENCSR438CEM_counts_pattern_9.n_27-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR808FFI_ChIP_ZKSCAN8_HepG2_ENCSR318CNS_counts_pattern_0.n_2452-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR808FFI_ChIP_ZKSCAN8_HepG2_ENCSR318CNS_counts_pattern_10.n_188-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR808FFI_ChIP_ZKSCAN8_HepG2_ENCSR318CNS_counts_pattern_11.n_103-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR808FFI_ChIP_ZKSCAN8_HepG2_ENCSR318CNS_counts_pattern_12.n_85-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR808FFI_ChIP_ZKSCAN8_HepG2_ENCSR318CNS_counts_pattern_13.n_39-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR808FFI_ChIP_ZKSCAN8_HepG2_ENCSR318CNS_counts_pattern_1.n_2330-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR808FFI_ChIP_ZKSCAN8_HepG2_ENCSR318CNS_counts_pattern_2.n_1801-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR808FFI_ChIP_ZKSCAN8_HepG2_ENCSR318CNS_counts_pattern_3.n_1410-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR808FFI_ChIP_ZKSCAN8_HepG2_ENCSR318CNS_counts_pattern_4.n_981-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR808FFI_ChIP_ZKSCAN8_HepG2_ENCSR318CNS_counts_pattern_5.n_786-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR808FFI_ChIP_ZKSCAN8_HepG2_ENCSR318CNS_counts_pattern_6.n_640-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR808FFI_ChIP_ZKSCAN8_HepG2_ENCSR318CNS_counts_pattern_7.n_394-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR808FFI_ChIP_ZKSCAN8_HepG2_ENCSR318CNS_counts_pattern_8.n_284-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZKSCAN8-201/pos_patterns.ENCSR808FFI_ChIP_ZKSCAN8_HepG2_ENCSR318CNS_counts_pattern_9.n_190-vs-ZKSCAN8-201.alignment counts-znf_b1h_alignment/ZKSCAN8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMAT4-201/neg_patterns.ENCSR807VQT_ChIP_ZMAT4_WTC11_ENCSR279COI_counts_pattern_0.n_653-vs-ZMAT4-201.alignment counts-znf_b1h_alignment/ZMAT4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMAT4-201/neg_patterns.ENCSR807VQT_ChIP_ZMAT4_WTC11_ENCSR279COI_counts_pattern_1.n_610-vs-ZMAT4-201.alignment counts-znf_b1h_alignment/ZMAT4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMAT4-201/neg_patterns.ENCSR807VQT_ChIP_ZMAT4_WTC11_ENCSR279COI_counts_pattern_2.n_305-vs-ZMAT4-201.alignment counts-znf_b1h_alignment/ZMAT4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMAT4-201/neg_patterns.ENCSR807VQT_ChIP_ZMAT4_WTC11_ENCSR279COI_counts_pattern_3.n_96-vs-ZMAT4-201.alignment counts-znf_b1h_alignment/ZMAT4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMAT4-201/neg_patterns.ENCSR807VQT_ChIP_ZMAT4_WTC11_ENCSR279COI_counts_pattern_4.n_82-vs-ZMAT4-201.alignment counts-znf_b1h_alignment/ZMAT4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMAT4-201/neg_patterns.ENCSR807VQT_ChIP_ZMAT4_WTC11_ENCSR279COI_counts_pattern_5.n_46-vs-ZMAT4-201.alignment counts-znf_b1h_alignment/ZMAT4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMAT4-201/neg_patterns.ENCSR807VQT_ChIP_ZMAT4_WTC11_ENCSR279COI_counts_pattern_6.n_45-vs-ZMAT4-201.alignment counts-znf_b1h_alignment/ZMAT4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMAT4-201/neg_patterns.ENCSR807VQT_ChIP_ZMAT4_WTC11_ENCSR279COI_counts_pattern_7.n_33-vs-ZMAT4-201.alignment counts-znf_b1h_alignment/ZMAT4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMAT4-201/pos_patterns.ENCSR807VQT_ChIP_ZMAT4_WTC11_ENCSR279COI_counts_pattern_0.n_433-vs-ZMAT4-201.alignment counts-znf_b1h_alignment/ZMAT4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMAT4-201/pos_patterns.ENCSR807VQT_ChIP_ZMAT4_WTC11_ENCSR279COI_counts_pattern_1.n_111-vs-ZMAT4-201.alignment counts-znf_b1h_alignment/ZMAT4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMAT4-201/pos_patterns.ENCSR807VQT_ChIP_ZMAT4_WTC11_ENCSR279COI_counts_pattern_2.n_97-vs-ZMAT4-201.alignment counts-znf_b1h_alignment/ZMAT4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMAT4-201/pos_patterns.ENCSR807VQT_ChIP_ZMAT4_WTC11_ENCSR279COI_counts_pattern_3.n_85-vs-ZMAT4-201.alignment counts-znf_b1h_alignment/ZMAT4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMAT4-201/pos_patterns.ENCSR807VQT_ChIP_ZMAT4_WTC11_ENCSR279COI_counts_pattern_4.n_65-vs-ZMAT4-201.alignment counts-znf_b1h_alignment/ZMAT4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMAT4-201/pos_patterns.ENCSR807VQT_ChIP_ZMAT4_WTC11_ENCSR279COI_counts_pattern_5.n_56-vs-ZMAT4-201.alignment counts-znf_b1h_alignment/ZMAT4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMAT4-201/pos_patterns.ENCSR807VQT_ChIP_ZMAT4_WTC11_ENCSR279COI_counts_pattern_6.n_42-vs-ZMAT4-201.alignment counts-znf_b1h_alignment/ZMAT4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMAT4-201/pos_patterns.ENCSR807VQT_ChIP_ZMAT4_WTC11_ENCSR279COI_counts_pattern_7.n_38-vs-ZMAT4-201.alignment counts-znf_b1h_alignment/ZMAT4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMAT4-201/pos_patterns.ENCSR807VQT_ChIP_ZMAT4_WTC11_ENCSR279COI_counts_pattern_8.n_23-vs-ZMAT4-201.alignment counts-znf_b1h_alignment/ZMAT4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMAT4-202/neg_patterns.ENCSR807VQT_ChIP_ZMAT4_WTC11_ENCSR279COI_counts_pattern_0.n_653-vs-ZMAT4-202.alignment counts-znf_b1h_alignment/ZMAT4-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMAT4-202/neg_patterns.ENCSR807VQT_ChIP_ZMAT4_WTC11_ENCSR279COI_counts_pattern_1.n_610-vs-ZMAT4-202.alignment counts-znf_b1h_alignment/ZMAT4-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMAT4-202/neg_patterns.ENCSR807VQT_ChIP_ZMAT4_WTC11_ENCSR279COI_counts_pattern_2.n_305-vs-ZMAT4-202.alignment counts-znf_b1h_alignment/ZMAT4-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMAT4-202/neg_patterns.ENCSR807VQT_ChIP_ZMAT4_WTC11_ENCSR279COI_counts_pattern_3.n_96-vs-ZMAT4-202.alignment counts-znf_b1h_alignment/ZMAT4-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMAT4-202/neg_patterns.ENCSR807VQT_ChIP_ZMAT4_WTC11_ENCSR279COI_counts_pattern_4.n_82-vs-ZMAT4-202.alignment counts-znf_b1h_alignment/ZMAT4-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMAT4-202/neg_patterns.ENCSR807VQT_ChIP_ZMAT4_WTC11_ENCSR279COI_counts_pattern_5.n_46-vs-ZMAT4-202.alignment counts-znf_b1h_alignment/ZMAT4-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMAT4-202/neg_patterns.ENCSR807VQT_ChIP_ZMAT4_WTC11_ENCSR279COI_counts_pattern_6.n_45-vs-ZMAT4-202.alignment counts-znf_b1h_alignment/ZMAT4-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMAT4-202/neg_patterns.ENCSR807VQT_ChIP_ZMAT4_WTC11_ENCSR279COI_counts_pattern_7.n_33-vs-ZMAT4-202.alignment counts-znf_b1h_alignment/ZMAT4-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMAT4-202/pos_patterns.ENCSR807VQT_ChIP_ZMAT4_WTC11_ENCSR279COI_counts_pattern_0.n_433-vs-ZMAT4-202.alignment counts-znf_b1h_alignment/ZMAT4-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMAT4-202/pos_patterns.ENCSR807VQT_ChIP_ZMAT4_WTC11_ENCSR279COI_counts_pattern_1.n_111-vs-ZMAT4-202.alignment counts-znf_b1h_alignment/ZMAT4-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMAT4-202/pos_patterns.ENCSR807VQT_ChIP_ZMAT4_WTC11_ENCSR279COI_counts_pattern_2.n_97-vs-ZMAT4-202.alignment counts-znf_b1h_alignment/ZMAT4-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMAT4-202/pos_patterns.ENCSR807VQT_ChIP_ZMAT4_WTC11_ENCSR279COI_counts_pattern_3.n_85-vs-ZMAT4-202.alignment counts-znf_b1h_alignment/ZMAT4-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMAT4-202/pos_patterns.ENCSR807VQT_ChIP_ZMAT4_WTC11_ENCSR279COI_counts_pattern_4.n_65-vs-ZMAT4-202.alignment counts-znf_b1h_alignment/ZMAT4-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMAT4-202/pos_patterns.ENCSR807VQT_ChIP_ZMAT4_WTC11_ENCSR279COI_counts_pattern_5.n_56-vs-ZMAT4-202.alignment counts-znf_b1h_alignment/ZMAT4-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMAT4-202/pos_patterns.ENCSR807VQT_ChIP_ZMAT4_WTC11_ENCSR279COI_counts_pattern_6.n_42-vs-ZMAT4-202.alignment counts-znf_b1h_alignment/ZMAT4-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMAT4-202/pos_patterns.ENCSR807VQT_ChIP_ZMAT4_WTC11_ENCSR279COI_counts_pattern_7.n_38-vs-ZMAT4-202.alignment counts-znf_b1h_alignment/ZMAT4-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMAT4-202/pos_patterns.ENCSR807VQT_ChIP_ZMAT4_WTC11_ENCSR279COI_counts_pattern_8.n_23-vs-ZMAT4-202.alignment counts-znf_b1h_alignment/ZMAT4-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMYM2-201/pos_patterns.ENCSR066EWR_ChIP_ZMYM2_HepG2_ENCSR046XHG_counts_pattern_0.n_5644-vs-ZMYM2-201.alignment counts-znf_b1h_alignment/ZMYM2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMYM2-201/pos_patterns.ENCSR066EWR_ChIP_ZMYM2_HepG2_ENCSR046XHG_counts_pattern_10.n_264-vs-ZMYM2-201.alignment counts-znf_b1h_alignment/ZMYM2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMYM2-201/pos_patterns.ENCSR066EWR_ChIP_ZMYM2_HepG2_ENCSR046XHG_counts_pattern_11.n_247-vs-ZMYM2-201.alignment counts-znf_b1h_alignment/ZMYM2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMYM2-201/pos_patterns.ENCSR066EWR_ChIP_ZMYM2_HepG2_ENCSR046XHG_counts_pattern_12.n_198-vs-ZMYM2-201.alignment counts-znf_b1h_alignment/ZMYM2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMYM2-201/pos_patterns.ENCSR066EWR_ChIP_ZMYM2_HepG2_ENCSR046XHG_counts_pattern_13.n_173-vs-ZMYM2-201.alignment counts-znf_b1h_alignment/ZMYM2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMYM2-201/pos_patterns.ENCSR066EWR_ChIP_ZMYM2_HepG2_ENCSR046XHG_counts_pattern_14.n_138-vs-ZMYM2-201.alignment counts-znf_b1h_alignment/ZMYM2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMYM2-201/pos_patterns.ENCSR066EWR_ChIP_ZMYM2_HepG2_ENCSR046XHG_counts_pattern_15.n_36-vs-ZMYM2-201.alignment counts-znf_b1h_alignment/ZMYM2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMYM2-201/pos_patterns.ENCSR066EWR_ChIP_ZMYM2_HepG2_ENCSR046XHG_counts_pattern_16.n_23-vs-ZMYM2-201.alignment counts-znf_b1h_alignment/ZMYM2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMYM2-201/pos_patterns.ENCSR066EWR_ChIP_ZMYM2_HepG2_ENCSR046XHG_counts_pattern_1.n_2374-vs-ZMYM2-201.alignment counts-znf_b1h_alignment/ZMYM2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMYM2-201/pos_patterns.ENCSR066EWR_ChIP_ZMYM2_HepG2_ENCSR046XHG_counts_pattern_2.n_1951-vs-ZMYM2-201.alignment counts-znf_b1h_alignment/ZMYM2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMYM2-201/pos_patterns.ENCSR066EWR_ChIP_ZMYM2_HepG2_ENCSR046XHG_counts_pattern_3.n_1091-vs-ZMYM2-201.alignment counts-znf_b1h_alignment/ZMYM2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMYM2-201/pos_patterns.ENCSR066EWR_ChIP_ZMYM2_HepG2_ENCSR046XHG_counts_pattern_4.n_801-vs-ZMYM2-201.alignment counts-znf_b1h_alignment/ZMYM2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMYM2-201/pos_patterns.ENCSR066EWR_ChIP_ZMYM2_HepG2_ENCSR046XHG_counts_pattern_5.n_724-vs-ZMYM2-201.alignment counts-znf_b1h_alignment/ZMYM2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMYM2-201/pos_patterns.ENCSR066EWR_ChIP_ZMYM2_HepG2_ENCSR046XHG_counts_pattern_6.n_449-vs-ZMYM2-201.alignment counts-znf_b1h_alignment/ZMYM2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMYM2-201/pos_patterns.ENCSR066EWR_ChIP_ZMYM2_HepG2_ENCSR046XHG_counts_pattern_7.n_376-vs-ZMYM2-201.alignment counts-znf_b1h_alignment/ZMYM2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMYM2-201/pos_patterns.ENCSR066EWR_ChIP_ZMYM2_HepG2_ENCSR046XHG_counts_pattern_8.n_354-vs-ZMYM2-201.alignment counts-znf_b1h_alignment/ZMYM2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZMYM2-201/pos_patterns.ENCSR066EWR_ChIP_ZMYM2_HepG2_ENCSR046XHG_counts_pattern_9.n_332-vs-ZMYM2-201.alignment counts-znf_b1h_alignment/ZMYM2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN12-201/neg_patterns.ENCSR574YRZ_ChIP_ZSCAN12_HepG2_ENCSR249PYI_counts_pattern_0.n_29-vs-ZSCAN12-201.alignment counts-znf_b1h_alignment/ZSCAN12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN12-201/neg_patterns.ENCSR574YRZ_ChIP_ZSCAN12_HepG2_ENCSR249PYI_counts_pattern_1.n_23-vs-ZSCAN12-201.alignment counts-znf_b1h_alignment/ZSCAN12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN12-201/neg_patterns.ENCSR574YRZ_ChIP_ZSCAN12_HepG2_ENCSR249PYI_counts_pattern_2.n_21-vs-ZSCAN12-201.alignment counts-znf_b1h_alignment/ZSCAN12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN12-201/pos_patterns.ENCSR574YRZ_ChIP_ZSCAN12_HepG2_ENCSR249PYI_counts_pattern_0.n_1128-vs-ZSCAN12-201.alignment counts-znf_b1h_alignment/ZSCAN12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN12-201/pos_patterns.ENCSR574YRZ_ChIP_ZSCAN12_HepG2_ENCSR249PYI_counts_pattern_10.n_106-vs-ZSCAN12-201.alignment counts-znf_b1h_alignment/ZSCAN12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN12-201/pos_patterns.ENCSR574YRZ_ChIP_ZSCAN12_HepG2_ENCSR249PYI_counts_pattern_11.n_97-vs-ZSCAN12-201.alignment counts-znf_b1h_alignment/ZSCAN12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN12-201/pos_patterns.ENCSR574YRZ_ChIP_ZSCAN12_HepG2_ENCSR249PYI_counts_pattern_12.n_71-vs-ZSCAN12-201.alignment counts-znf_b1h_alignment/ZSCAN12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN12-201/pos_patterns.ENCSR574YRZ_ChIP_ZSCAN12_HepG2_ENCSR249PYI_counts_pattern_13.n_28-vs-ZSCAN12-201.alignment counts-znf_b1h_alignment/ZSCAN12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN12-201/pos_patterns.ENCSR574YRZ_ChIP_ZSCAN12_HepG2_ENCSR249PYI_counts_pattern_1.n_988-vs-ZSCAN12-201.alignment counts-znf_b1h_alignment/ZSCAN12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN12-201/pos_patterns.ENCSR574YRZ_ChIP_ZSCAN12_HepG2_ENCSR249PYI_counts_pattern_2.n_865-vs-ZSCAN12-201.alignment counts-znf_b1h_alignment/ZSCAN12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN12-201/pos_patterns.ENCSR574YRZ_ChIP_ZSCAN12_HepG2_ENCSR249PYI_counts_pattern_3.n_508-vs-ZSCAN12-201.alignment counts-znf_b1h_alignment/ZSCAN12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN12-201/pos_patterns.ENCSR574YRZ_ChIP_ZSCAN12_HepG2_ENCSR249PYI_counts_pattern_4.n_306-vs-ZSCAN12-201.alignment counts-znf_b1h_alignment/ZSCAN12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN12-201/pos_patterns.ENCSR574YRZ_ChIP_ZSCAN12_HepG2_ENCSR249PYI_counts_pattern_5.n_297-vs-ZSCAN12-201.alignment counts-znf_b1h_alignment/ZSCAN12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN12-201/pos_patterns.ENCSR574YRZ_ChIP_ZSCAN12_HepG2_ENCSR249PYI_counts_pattern_6.n_204-vs-ZSCAN12-201.alignment counts-znf_b1h_alignment/ZSCAN12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN12-201/pos_patterns.ENCSR574YRZ_ChIP_ZSCAN12_HepG2_ENCSR249PYI_counts_pattern_7.n_190-vs-ZSCAN12-201.alignment counts-znf_b1h_alignment/ZSCAN12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN12-201/pos_patterns.ENCSR574YRZ_ChIP_ZSCAN12_HepG2_ENCSR249PYI_counts_pattern_8.n_152-vs-ZSCAN12-201.alignment counts-znf_b1h_alignment/ZSCAN12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN12-201/pos_patterns.ENCSR574YRZ_ChIP_ZSCAN12_HepG2_ENCSR249PYI_counts_pattern_9.n_151-vs-ZSCAN12-201.alignment counts-znf_b1h_alignment/ZSCAN12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN16-201/Hughes_GR_models_ZSCAN16_counts-pos.pattern_0.n_9712-vs-ZSCAN16-201.alignment counts-znf_b1h_alignment/ZSCAN16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN16-201/Hughes_GR_models_ZSCAN16_counts-pos.pattern_1.n_3866-vs-ZSCAN16-201.alignment counts-znf_b1h_alignment/ZSCAN16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN16-201/Hughes_GR_models_ZSCAN16_counts-pos.pattern_2.n_1149-vs-ZSCAN16-201.alignment counts-znf_b1h_alignment/ZSCAN16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN16-201/Hughes_GR_models_ZSCAN16_counts-pos.pattern_3.n_632-vs-ZSCAN16-201.alignment counts-znf_b1h_alignment/ZSCAN16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN16-201/Hughes_GR_models_ZSCAN16_counts-pos.pattern_4.n_167-vs-ZSCAN16-201.alignment counts-znf_b1h_alignment/ZSCAN16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN16-201/Hughes_GR_models_ZSCAN16_counts-pos.pattern_5.n_73-vs-ZSCAN16-201.alignment counts-znf_b1h_alignment/ZSCAN16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN16-201/Hughes_GR_models_ZSCAN16_counts-pos.pattern_6.n_42-vs-ZSCAN16-201.alignment counts-znf_b1h_alignment/ZSCAN16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN16-201/Hughes_GR_models_ZSCAN16_counts-pos.pattern_7.n_26-vs-ZSCAN16-201.alignment counts-znf_b1h_alignment/ZSCAN16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN16-201/pos_patterns.ENCSR864VJE_ChIP_ZSCAN16_HEK293_ENCSR201ESU_counts_pattern_0.n_3148-vs-ZSCAN16-201.alignment counts-znf_b1h_alignment/ZSCAN16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN18-201/neg_patterns.ENCSR499FDW_ChIP_ZSCAN18_WTC11_ENCSR454ZVU_counts_pattern_0.n_119-vs-ZSCAN18-201.alignment counts-znf_b1h_alignment/ZSCAN18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN18-201/neg_patterns.ENCSR499FDW_ChIP_ZSCAN18_WTC11_ENCSR454ZVU_counts_pattern_1.n_48-vs-ZSCAN18-201.alignment counts-znf_b1h_alignment/ZSCAN18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN18-201/neg_patterns.ENCSR499FDW_ChIP_ZSCAN18_WTC11_ENCSR454ZVU_counts_pattern_2.n_26-vs-ZSCAN18-201.alignment counts-znf_b1h_alignment/ZSCAN18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN18-201/neg_patterns.ENCSR499FDW_ChIP_ZSCAN18_WTC11_ENCSR454ZVU_counts_pattern_3.n_23-vs-ZSCAN18-201.alignment counts-znf_b1h_alignment/ZSCAN18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN18-201/pos_patterns.ENCSR499FDW_ChIP_ZSCAN18_WTC11_ENCSR454ZVU_counts_pattern_0.n_267-vs-ZSCAN18-201.alignment counts-znf_b1h_alignment/ZSCAN18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN18-201/pos_patterns.ENCSR499FDW_ChIP_ZSCAN18_WTC11_ENCSR454ZVU_counts_pattern_1.n_102-vs-ZSCAN18-201.alignment counts-znf_b1h_alignment/ZSCAN18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN18-201/pos_patterns.ENCSR499FDW_ChIP_ZSCAN18_WTC11_ENCSR454ZVU_counts_pattern_2.n_86-vs-ZSCAN18-201.alignment counts-znf_b1h_alignment/ZSCAN18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN18-201/pos_patterns.ENCSR499FDW_ChIP_ZSCAN18_WTC11_ENCSR454ZVU_counts_pattern_3.n_73-vs-ZSCAN18-201.alignment counts-znf_b1h_alignment/ZSCAN18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN18-201/pos_patterns.ENCSR499FDW_ChIP_ZSCAN18_WTC11_ENCSR454ZVU_counts_pattern_4.n_59-vs-ZSCAN18-201.alignment counts-znf_b1h_alignment/ZSCAN18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN18-201/pos_patterns.ENCSR499FDW_ChIP_ZSCAN18_WTC11_ENCSR454ZVU_counts_pattern_5.n_38-vs-ZSCAN18-201.alignment counts-znf_b1h_alignment/ZSCAN18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN18-201/pos_patterns.ENCSR721QZV_ChIP_ZSCAN18_HEK293_ENCSR404KMD_counts_pattern_0.n_623-vs-ZSCAN18-201.alignment counts-znf_b1h_alignment/ZSCAN18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN18-201/pos_patterns.ENCSR721QZV_ChIP_ZSCAN18_HEK293_ENCSR404KMD_counts_pattern_1.n_505-vs-ZSCAN18-201.alignment counts-znf_b1h_alignment/ZSCAN18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN18-201/pos_patterns.ENCSR721QZV_ChIP_ZSCAN18_HEK293_ENCSR404KMD_counts_pattern_2.n_241-vs-ZSCAN18-201.alignment counts-znf_b1h_alignment/ZSCAN18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN18-201/pos_patterns.ENCSR721QZV_ChIP_ZSCAN18_HEK293_ENCSR404KMD_counts_pattern_3.n_154-vs-ZSCAN18-201.alignment counts-znf_b1h_alignment/ZSCAN18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN18-201/pos_patterns.ENCSR721QZV_ChIP_ZSCAN18_HEK293_ENCSR404KMD_counts_pattern_4.n_144-vs-ZSCAN18-201.alignment counts-znf_b1h_alignment/ZSCAN18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN18-201/pos_patterns.ENCSR721QZV_ChIP_ZSCAN18_HEK293_ENCSR404KMD_counts_pattern_5.n_86-vs-ZSCAN18-201.alignment counts-znf_b1h_alignment/ZSCAN18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN18-201/pos_patterns.ENCSR721QZV_ChIP_ZSCAN18_HEK293_ENCSR404KMD_counts_pattern_6.n_67-vs-ZSCAN18-201.alignment counts-znf_b1h_alignment/ZSCAN18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN18-201/pos_patterns.ENCSR721QZV_ChIP_ZSCAN18_HEK293_ENCSR404KMD_counts_pattern_7.n_66-vs-ZSCAN18-201.alignment counts-znf_b1h_alignment/ZSCAN18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN20-201/neg_patterns.ENCSR169JRW_ChIP_ZSCAN20_HepG2_ENCSR694JSJ_counts_pattern_0.n_31-vs-ZSCAN20-201.alignment counts-znf_b1h_alignment/ZSCAN20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN20-201/neg_patterns.ENCSR169JRW_ChIP_ZSCAN20_HepG2_ENCSR694JSJ_counts_pattern_1.n_26-vs-ZSCAN20-201.alignment counts-znf_b1h_alignment/ZSCAN20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN20-201/neg_patterns.ENCSR169JRW_ChIP_ZSCAN20_HepG2_ENCSR694JSJ_counts_pattern_2.n_26-vs-ZSCAN20-201.alignment counts-znf_b1h_alignment/ZSCAN20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN20-201/neg_patterns.ENCSR169JRW_ChIP_ZSCAN20_HepG2_ENCSR694JSJ_counts_pattern_3.n_25-vs-ZSCAN20-201.alignment counts-znf_b1h_alignment/ZSCAN20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN20-201/neg_patterns.ENCSR169JRW_ChIP_ZSCAN20_HepG2_ENCSR694JSJ_counts_pattern_4.n_24-vs-ZSCAN20-201.alignment counts-znf_b1h_alignment/ZSCAN20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN20-201/neg_patterns.ENCSR169JRW_ChIP_ZSCAN20_HepG2_ENCSR694JSJ_counts_pattern_5.n_23-vs-ZSCAN20-201.alignment counts-znf_b1h_alignment/ZSCAN20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN20-201/neg_patterns.ENCSR169JRW_ChIP_ZSCAN20_HepG2_ENCSR694JSJ_counts_pattern_6.n_22-vs-ZSCAN20-201.alignment counts-znf_b1h_alignment/ZSCAN20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN20-201/neg_patterns.ENCSR169JRW_ChIP_ZSCAN20_HepG2_ENCSR694JSJ_counts_pattern_7.n_21-vs-ZSCAN20-201.alignment counts-znf_b1h_alignment/ZSCAN20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN20-201/pos_patterns.ENCSR169JRW_ChIP_ZSCAN20_HepG2_ENCSR694JSJ_counts_pattern_0.n_2038-vs-ZSCAN20-201.alignment counts-znf_b1h_alignment/ZSCAN20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN20-201/pos_patterns.ENCSR169JRW_ChIP_ZSCAN20_HepG2_ENCSR694JSJ_counts_pattern_1.n_1469-vs-ZSCAN20-201.alignment counts-znf_b1h_alignment/ZSCAN20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN20-201/pos_patterns.ENCSR169JRW_ChIP_ZSCAN20_HepG2_ENCSR694JSJ_counts_pattern_2.n_1212-vs-ZSCAN20-201.alignment counts-znf_b1h_alignment/ZSCAN20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN20-201/pos_patterns.ENCSR169JRW_ChIP_ZSCAN20_HepG2_ENCSR694JSJ_counts_pattern_3.n_891-vs-ZSCAN20-201.alignment counts-znf_b1h_alignment/ZSCAN20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN20-201/pos_patterns.ENCSR169JRW_ChIP_ZSCAN20_HepG2_ENCSR694JSJ_counts_pattern_4.n_524-vs-ZSCAN20-201.alignment counts-znf_b1h_alignment/ZSCAN20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN20-201/pos_patterns.ENCSR169JRW_ChIP_ZSCAN20_HepG2_ENCSR694JSJ_counts_pattern_5.n_325-vs-ZSCAN20-201.alignment counts-znf_b1h_alignment/ZSCAN20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN20-201/pos_patterns.ENCSR169JRW_ChIP_ZSCAN20_HepG2_ENCSR694JSJ_counts_pattern_6.n_287-vs-ZSCAN20-201.alignment counts-znf_b1h_alignment/ZSCAN20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN20-201/pos_patterns.ENCSR169JRW_ChIP_ZSCAN20_HepG2_ENCSR694JSJ_counts_pattern_7.n_131-vs-ZSCAN20-201.alignment counts-znf_b1h_alignment/ZSCAN20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN20-201/pos_patterns.ENCSR169JRW_ChIP_ZSCAN20_HepG2_ENCSR694JSJ_counts_pattern_8.n_32-vs-ZSCAN20-201.alignment counts-znf_b1h_alignment/ZSCAN20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN20-201/pos_patterns.ENCSR548FLW_ChIP_ZSCAN20_A549_ENCSR651BLS_counts_pattern_0.n_604-vs-ZSCAN20-201.alignment counts-znf_b1h_alignment/ZSCAN20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN20-201/pos_patterns.ENCSR548FLW_ChIP_ZSCAN20_A549_ENCSR651BLS_counts_pattern_1.n_151-vs-ZSCAN20-201.alignment counts-znf_b1h_alignment/ZSCAN20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN20-201/pos_patterns.ENCSR548FLW_ChIP_ZSCAN20_A549_ENCSR651BLS_counts_pattern_2.n_143-vs-ZSCAN20-201.alignment counts-znf_b1h_alignment/ZSCAN20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN20-201/pos_patterns.ENCSR548FLW_ChIP_ZSCAN20_A549_ENCSR651BLS_counts_pattern_3.n_119-vs-ZSCAN20-201.alignment counts-znf_b1h_alignment/ZSCAN20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN20-201/pos_patterns.ENCSR548FLW_ChIP_ZSCAN20_A549_ENCSR651BLS_counts_pattern_4.n_76-vs-ZSCAN20-201.alignment counts-znf_b1h_alignment/ZSCAN20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN20-201/pos_patterns.ENCSR548FLW_ChIP_ZSCAN20_A549_ENCSR651BLS_counts_pattern_5.n_54-vs-ZSCAN20-201.alignment counts-znf_b1h_alignment/ZSCAN20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN20-201/pos_patterns.ENCSR548FLW_ChIP_ZSCAN20_A549_ENCSR651BLS_counts_pattern_6.n_48-vs-ZSCAN20-201.alignment counts-znf_b1h_alignment/ZSCAN20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN20-201/pos_patterns.ENCSR548FLW_ChIP_ZSCAN20_A549_ENCSR651BLS_counts_pattern_7.n_34-vs-ZSCAN20-201.alignment counts-znf_b1h_alignment/ZSCAN20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN20-201/pos_patterns.ENCSR548FLW_ChIP_ZSCAN20_A549_ENCSR651BLS_counts_pattern_8.n_26-vs-ZSCAN20-201.alignment counts-znf_b1h_alignment/ZSCAN20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN20-201/pos_patterns.ENCSR548FLW_ChIP_ZSCAN20_A549_ENCSR651BLS_counts_pattern_9.n_23-vs-ZSCAN20-201.alignment counts-znf_b1h_alignment/ZSCAN20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN21-201/pos_patterns.ENCSR210DDA_ChIP_ZSCAN21_HepG2_ENCSR873BKE_counts_pattern_0.n_2769-vs-ZSCAN21-201.alignment counts-znf_b1h_alignment/ZSCAN21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN21-201/pos_patterns.ENCSR210DDA_ChIP_ZSCAN21_HepG2_ENCSR873BKE_counts_pattern_10.n_99-vs-ZSCAN21-201.alignment counts-znf_b1h_alignment/ZSCAN21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN21-201/pos_patterns.ENCSR210DDA_ChIP_ZSCAN21_HepG2_ENCSR873BKE_counts_pattern_11.n_51-vs-ZSCAN21-201.alignment counts-znf_b1h_alignment/ZSCAN21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN21-201/pos_patterns.ENCSR210DDA_ChIP_ZSCAN21_HepG2_ENCSR873BKE_counts_pattern_12.n_40-vs-ZSCAN21-201.alignment counts-znf_b1h_alignment/ZSCAN21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN21-201/pos_patterns.ENCSR210DDA_ChIP_ZSCAN21_HepG2_ENCSR873BKE_counts_pattern_13.n_31-vs-ZSCAN21-201.alignment counts-znf_b1h_alignment/ZSCAN21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN21-201/pos_patterns.ENCSR210DDA_ChIP_ZSCAN21_HepG2_ENCSR873BKE_counts_pattern_1.n_2365-vs-ZSCAN21-201.alignment counts-znf_b1h_alignment/ZSCAN21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN21-201/pos_patterns.ENCSR210DDA_ChIP_ZSCAN21_HepG2_ENCSR873BKE_counts_pattern_2.n_2020-vs-ZSCAN21-201.alignment counts-znf_b1h_alignment/ZSCAN21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN21-201/pos_patterns.ENCSR210DDA_ChIP_ZSCAN21_HepG2_ENCSR873BKE_counts_pattern_3.n_1565-vs-ZSCAN21-201.alignment counts-znf_b1h_alignment/ZSCAN21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN21-201/pos_patterns.ENCSR210DDA_ChIP_ZSCAN21_HepG2_ENCSR873BKE_counts_pattern_4.n_1554-vs-ZSCAN21-201.alignment counts-znf_b1h_alignment/ZSCAN21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN21-201/pos_patterns.ENCSR210DDA_ChIP_ZSCAN21_HepG2_ENCSR873BKE_counts_pattern_5.n_1456-vs-ZSCAN21-201.alignment counts-znf_b1h_alignment/ZSCAN21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN21-201/pos_patterns.ENCSR210DDA_ChIP_ZSCAN21_HepG2_ENCSR873BKE_counts_pattern_6.n_1256-vs-ZSCAN21-201.alignment counts-znf_b1h_alignment/ZSCAN21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN21-201/pos_patterns.ENCSR210DDA_ChIP_ZSCAN21_HepG2_ENCSR873BKE_counts_pattern_7.n_526-vs-ZSCAN21-201.alignment counts-znf_b1h_alignment/ZSCAN21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN21-201/pos_patterns.ENCSR210DDA_ChIP_ZSCAN21_HepG2_ENCSR873BKE_counts_pattern_8.n_400-vs-ZSCAN21-201.alignment counts-znf_b1h_alignment/ZSCAN21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN21-201/pos_patterns.ENCSR210DDA_ChIP_ZSCAN21_HepG2_ENCSR873BKE_counts_pattern_9.n_211-vs-ZSCAN21-201.alignment counts-znf_b1h_alignment/ZSCAN21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN21-201/pos_patterns.ENCSR253CKN_ChIP_ZSCAN21_HEK293_ENCSR591HHL_counts_pattern_0.n_3109-vs-ZSCAN21-201.alignment counts-znf_b1h_alignment/ZSCAN21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN21-201/pos_patterns.ENCSR253CKN_ChIP_ZSCAN21_HEK293_ENCSR591HHL_counts_pattern_10.n_21-vs-ZSCAN21-201.alignment counts-znf_b1h_alignment/ZSCAN21-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN21-201/pos_patterns.ENCSR253CKN_ChIP_ZSCAN21_HEK293_ENCSR591HHL_counts_pattern_1.n_2363-vs-ZSCAN21-201.alignment counts-znf_b1h_alignment/ZSCAN21-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN21-201/pos_patterns.ENCSR253CKN_ChIP_ZSCAN21_HEK293_ENCSR591HHL_counts_pattern_3.n_1419-vs-ZSCAN21-201.alignment counts-znf_b1h_alignment/ZSCAN21-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN22-201/Hughes_GR_models_ZSCAN22_counts-pos.pattern_0.n_8662-vs-ZSCAN22-201.alignment counts-znf_b1h_alignment/ZSCAN22-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN22-201/pos_patterns.ENCSR050KWL_ChIP_ZSCAN22_HepG2_ENCSR880BAN_counts_pattern_1.n_269-vs-ZSCAN22-201.alignment counts-znf_b1h_alignment/ZSCAN22-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN22-201/pos_patterns.ENCSR050KWL_ChIP_ZSCAN22_HepG2_ENCSR880BAN_counts_pattern_2.n_263-vs-ZSCAN22-201.alignment counts-znf_b1h_alignment/ZSCAN22-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN22-201/pos_patterns.ENCSR050KWL_ChIP_ZSCAN22_HepG2_ENCSR880BAN_counts_pattern_3.n_261-vs-ZSCAN22-201.alignment counts-znf_b1h_alignment/ZSCAN22-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN22-201/pos_patterns.ENCSR050KWL_ChIP_ZSCAN22_HepG2_ENCSR880BAN_counts_pattern_4.n_142-vs-ZSCAN22-201.alignment counts-znf_b1h_alignment/ZSCAN22-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN22-201/pos_patterns.ENCSR050KWL_ChIP_ZSCAN22_HepG2_ENCSR880BAN_counts_pattern_5.n_29-vs-ZSCAN22-201.alignment counts-znf_b1h_alignment/ZSCAN22-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN23-201/pos_patterns.ENCSR705ASR_ChIP_ZSCAN23_HEK293_ENCSR706OQL_counts_pattern_0.n_1455-vs-ZSCAN23-201.alignment counts-znf_b1h_alignment/ZSCAN23-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN23-201/pos_patterns.ENCSR705ASR_ChIP_ZSCAN23_HEK293_ENCSR706OQL_counts_pattern_1.n_1322-vs-ZSCAN23-201.alignment counts-znf_b1h_alignment/ZSCAN23-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN23-201/pos_patterns.ENCSR705ASR_ChIP_ZSCAN23_HEK293_ENCSR706OQL_counts_pattern_2.n_248-vs-ZSCAN23-201.alignment counts-znf_b1h_alignment/ZSCAN23-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN23-201/pos_patterns.ENCSR705ASR_ChIP_ZSCAN23_HEK293_ENCSR706OQL_counts_pattern_3.n_220-vs-ZSCAN23-201.alignment counts-znf_b1h_alignment/ZSCAN23-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN23-201/pos_patterns.ENCSR705ASR_ChIP_ZSCAN23_HEK293_ENCSR706OQL_counts_pattern_4.n_186-vs-ZSCAN23-201.alignment counts-znf_b1h_alignment/ZSCAN23-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN23-201/pos_patterns.ENCSR705ASR_ChIP_ZSCAN23_HEK293_ENCSR706OQL_counts_pattern_6.n_83-vs-ZSCAN23-201.alignment counts-znf_b1h_alignment/ZSCAN23-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN23-201/pos_patterns.ENCSR705ASR_ChIP_ZSCAN23_HEK293_ENCSR706OQL_counts_pattern_7.n_68-vs-ZSCAN23-201.alignment counts-znf_b1h_alignment/ZSCAN23-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN23-201/pos_patterns.ENCSR705ASR_ChIP_ZSCAN23_HEK293_ENCSR706OQL_counts_pattern_8.n_53-vs-ZSCAN23-201.alignment counts-znf_b1h_alignment/ZSCAN23-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN25-202/pos_patterns.ENCSR037LQB_ChIP_ZSCAN25_HepG2_ENCSR773HKF_counts_pattern_0.n_4913-vs-ZSCAN25-202.alignment counts-znf_b1h_alignment/ZSCAN25-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN25-202/pos_patterns.ENCSR037LQB_ChIP_ZSCAN25_HepG2_ENCSR773HKF_counts_pattern_1.n_3110-vs-ZSCAN25-202.alignment counts-znf_b1h_alignment/ZSCAN25-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN25-202/pos_patterns.ENCSR037LQB_ChIP_ZSCAN25_HepG2_ENCSR773HKF_counts_pattern_2.n_1196-vs-ZSCAN25-202.alignment counts-znf_b1h_alignment/ZSCAN25-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN25-202/pos_patterns.ENCSR037LQB_ChIP_ZSCAN25_HepG2_ENCSR773HKF_counts_pattern_3.n_320-vs-ZSCAN25-202.alignment counts-znf_b1h_alignment/ZSCAN25-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN25-202/pos_patterns.ENCSR037LQB_ChIP_ZSCAN25_HepG2_ENCSR773HKF_counts_pattern_4.n_242-vs-ZSCAN25-202.alignment counts-znf_b1h_alignment/ZSCAN25-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN25-202/pos_patterns.ENCSR037LQB_ChIP_ZSCAN25_HepG2_ENCSR773HKF_counts_pattern_5.n_217-vs-ZSCAN25-202.alignment counts-znf_b1h_alignment/ZSCAN25-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN25-202/pos_patterns.ENCSR037LQB_ChIP_ZSCAN25_HepG2_ENCSR773HKF_counts_pattern_6.n_66-vs-ZSCAN25-202.alignment counts-znf_b1h_alignment/ZSCAN25-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN25-202/pos_patterns.ENCSR037LQB_ChIP_ZSCAN25_HepG2_ENCSR773HKF_counts_pattern_7.n_60-vs-ZSCAN25-202.alignment counts-znf_b1h_alignment/ZSCAN25-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN25-202/pos_patterns.ENCSR037LQB_ChIP_ZSCAN25_HepG2_ENCSR773HKF_counts_pattern_8.n_50-vs-ZSCAN25-202.alignment counts-znf_b1h_alignment/ZSCAN25-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN26-201/pos_patterns.ENCSR501NSC_ChIP_ZSCAN26_HEK293_ENCSR408NKD_counts_pattern_0.n_500-vs-ZSCAN26-201.alignment counts-znf_b1h_alignment/ZSCAN26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN26-201/pos_patterns.ENCSR501NSC_ChIP_ZSCAN26_HEK293_ENCSR408NKD_counts_pattern_1.n_128-vs-ZSCAN26-201.alignment counts-znf_b1h_alignment/ZSCAN26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN26-201/pos_patterns.ENCSR501NSC_ChIP_ZSCAN26_HEK293_ENCSR408NKD_counts_pattern_2.n_81-vs-ZSCAN26-201.alignment counts-znf_b1h_alignment/ZSCAN26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN26-201/pos_patterns.ENCSR501NSC_ChIP_ZSCAN26_HEK293_ENCSR408NKD_counts_pattern_3.n_78-vs-ZSCAN26-201.alignment counts-znf_b1h_alignment/ZSCAN26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN26-201/pos_patterns.ENCSR501NSC_ChIP_ZSCAN26_HEK293_ENCSR408NKD_counts_pattern_4.n_41-vs-ZSCAN26-201.alignment counts-znf_b1h_alignment/ZSCAN26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/Hughes_GR_models_ZSCAN29_counts-pos.pattern_0.n_38-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/Hughes_GR_models_ZSCAN29_counts-pos.pattern_1.n_34-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/Hughes_GR_models_ZSCAN29_counts-pos.pattern_2.n_23-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/Hughes_GR_models_ZSCAN29_counts-pos.pattern_3.n_22-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/neg_patterns.ENCSR175SZH_ChIP_ZSCAN29_K562_ENCSR451MPB_counts_pattern_0.n_35-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/neg_patterns.ENCSR175SZH_ChIP_ZSCAN29_K562_ENCSR451MPB_counts_pattern_1.n_23-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/pos_patterns.ENCSR175SZH_ChIP_ZSCAN29_K562_ENCSR451MPB_counts_pattern_0.n_6841-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/pos_patterns.ENCSR175SZH_ChIP_ZSCAN29_K562_ENCSR451MPB_counts_pattern_10.n_55-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/pos_patterns.ENCSR175SZH_ChIP_ZSCAN29_K562_ENCSR451MPB_counts_pattern_11.n_36-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/pos_patterns.ENCSR175SZH_ChIP_ZSCAN29_K562_ENCSR451MPB_counts_pattern_12.n_33-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/pos_patterns.ENCSR175SZH_ChIP_ZSCAN29_K562_ENCSR451MPB_counts_pattern_13.n_32-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/pos_patterns.ENCSR175SZH_ChIP_ZSCAN29_K562_ENCSR451MPB_counts_pattern_14.n_22-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/pos_patterns.ENCSR175SZH_ChIP_ZSCAN29_K562_ENCSR451MPB_counts_pattern_1.n_3335-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/pos_patterns.ENCSR175SZH_ChIP_ZSCAN29_K562_ENCSR451MPB_counts_pattern_2.n_440-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/pos_patterns.ENCSR175SZH_ChIP_ZSCAN29_K562_ENCSR451MPB_counts_pattern_3.n_164-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/pos_patterns.ENCSR175SZH_ChIP_ZSCAN29_K562_ENCSR451MPB_counts_pattern_4.n_163-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/pos_patterns.ENCSR175SZH_ChIP_ZSCAN29_K562_ENCSR451MPB_counts_pattern_5.n_154-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/pos_patterns.ENCSR175SZH_ChIP_ZSCAN29_K562_ENCSR451MPB_counts_pattern_6.n_122-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/pos_patterns.ENCSR175SZH_ChIP_ZSCAN29_K562_ENCSR451MPB_counts_pattern_7.n_118-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/pos_patterns.ENCSR175SZH_ChIP_ZSCAN29_K562_ENCSR451MPB_counts_pattern_8.n_114-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/pos_patterns.ENCSR175SZH_ChIP_ZSCAN29_K562_ENCSR451MPB_counts_pattern_9.n_103-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/pos_patterns.ENCSR412YGM_ChIP_ZSCAN29_GM12878_ENCSR268UNG_counts_pattern_0.n_1025-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/pos_patterns.ENCSR412YGM_ChIP_ZSCAN29_GM12878_ENCSR268UNG_counts_pattern_10.n_35-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/pos_patterns.ENCSR412YGM_ChIP_ZSCAN29_GM12878_ENCSR268UNG_counts_pattern_11.n_24-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/pos_patterns.ENCSR412YGM_ChIP_ZSCAN29_GM12878_ENCSR268UNG_counts_pattern_1.n_895-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/pos_patterns.ENCSR412YGM_ChIP_ZSCAN29_GM12878_ENCSR268UNG_counts_pattern_2.n_320-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/pos_patterns.ENCSR412YGM_ChIP_ZSCAN29_GM12878_ENCSR268UNG_counts_pattern_3.n_231-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/pos_patterns.ENCSR412YGM_ChIP_ZSCAN29_GM12878_ENCSR268UNG_counts_pattern_4.n_160-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/pos_patterns.ENCSR412YGM_ChIP_ZSCAN29_GM12878_ENCSR268UNG_counts_pattern_5.n_131-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/pos_patterns.ENCSR412YGM_ChIP_ZSCAN29_GM12878_ENCSR268UNG_counts_pattern_6.n_72-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/pos_patterns.ENCSR412YGM_ChIP_ZSCAN29_GM12878_ENCSR268UNG_counts_pattern_7.n_68-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/pos_patterns.ENCSR412YGM_ChIP_ZSCAN29_GM12878_ENCSR268UNG_counts_pattern_8.n_51-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/pos_patterns.ENCSR412YGM_ChIP_ZSCAN29_GM12878_ENCSR268UNG_counts_pattern_9.n_46-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/pos_patterns.ENCSR422VAG_ChIP_ZSCAN29_HepG2_ENCSR171VVK_counts_pattern_0.n_2479-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/pos_patterns.ENCSR422VAG_ChIP_ZSCAN29_HepG2_ENCSR171VVK_counts_pattern_10.n_101-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/pos_patterns.ENCSR422VAG_ChIP_ZSCAN29_HepG2_ENCSR171VVK_counts_pattern_11.n_81-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/pos_patterns.ENCSR422VAG_ChIP_ZSCAN29_HepG2_ENCSR171VVK_counts_pattern_12.n_73-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/pos_patterns.ENCSR422VAG_ChIP_ZSCAN29_HepG2_ENCSR171VVK_counts_pattern_13.n_43-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/pos_patterns.ENCSR422VAG_ChIP_ZSCAN29_HepG2_ENCSR171VVK_counts_pattern_1.n_2304-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/pos_patterns.ENCSR422VAG_ChIP_ZSCAN29_HepG2_ENCSR171VVK_counts_pattern_2.n_1372-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/pos_patterns.ENCSR422VAG_ChIP_ZSCAN29_HepG2_ENCSR171VVK_counts_pattern_3.n_1253-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/pos_patterns.ENCSR422VAG_ChIP_ZSCAN29_HepG2_ENCSR171VVK_counts_pattern_4.n_1019-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/pos_patterns.ENCSR422VAG_ChIP_ZSCAN29_HepG2_ENCSR171VVK_counts_pattern_5.n_719-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/pos_patterns.ENCSR422VAG_ChIP_ZSCAN29_HepG2_ENCSR171VVK_counts_pattern_6.n_426-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/pos_patterns.ENCSR422VAG_ChIP_ZSCAN29_HepG2_ENCSR171VVK_counts_pattern_7.n_386-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/pos_patterns.ENCSR422VAG_ChIP_ZSCAN29_HepG2_ENCSR171VVK_counts_pattern_8.n_216-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/pos_patterns.ENCSR422VAG_ChIP_ZSCAN29_HepG2_ENCSR171VVK_counts_pattern_9.n_113-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/pos_patterns.ENCSR635EXI_ChIP_ZSCAN29_K562_ENCSR926KQC_counts_pattern_0.n_2510-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/pos_patterns.ENCSR635EXI_ChIP_ZSCAN29_K562_ENCSR926KQC_counts_pattern_1.n_1313-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN29-202/pos_patterns.ENCSR635EXI_ChIP_ZSCAN29_K562_ENCSR926KQC_counts_pattern_2.n_41-vs-ZSCAN29-202.alignment counts-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/Hughes_GR_models_ZSCAN30_counts-pos.pattern_0.n_30-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/Hughes_GR_models_ZSCAN30_counts-pos.pattern_1.n_27-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/Hughes_GR_models_ZSCAN30_counts-pos.pattern_2.n_24-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/Hughes_GR_models_ZSCAN30_counts-pos.pattern_3.n_23-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/neg_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_counts_pattern_0.n_92-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/neg_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_counts_pattern_1.n_82-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/neg_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_counts_pattern_2.n_62-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/neg_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_counts_pattern_3.n_58-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/neg_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_counts_pattern_4.n_30-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/neg_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_counts_pattern_5.n_29-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/neg_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_counts_pattern_6.n_24-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR768VNZ_ChIP_ZSCAN30_HEK293_ENCSR210YNP_counts_pattern_0.n_5148-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR768VNZ_ChIP_ZSCAN30_HEK293_ENCSR210YNP_counts_pattern_10.n_263-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR768VNZ_ChIP_ZSCAN30_HEK293_ENCSR210YNP_counts_pattern_11.n_253-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR768VNZ_ChIP_ZSCAN30_HEK293_ENCSR210YNP_counts_pattern_12.n_241-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR768VNZ_ChIP_ZSCAN30_HEK293_ENCSR210YNP_counts_pattern_13.n_210-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR768VNZ_ChIP_ZSCAN30_HEK293_ENCSR210YNP_counts_pattern_14.n_56-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR768VNZ_ChIP_ZSCAN30_HEK293_ENCSR210YNP_counts_pattern_15.n_44-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR768VNZ_ChIP_ZSCAN30_HEK293_ENCSR210YNP_counts_pattern_16.n_26-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR768VNZ_ChIP_ZSCAN30_HEK293_ENCSR210YNP_counts_pattern_17.n_24-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR768VNZ_ChIP_ZSCAN30_HEK293_ENCSR210YNP_counts_pattern_1.n_2374-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR768VNZ_ChIP_ZSCAN30_HEK293_ENCSR210YNP_counts_pattern_2.n_1223-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR768VNZ_ChIP_ZSCAN30_HEK293_ENCSR210YNP_counts_pattern_3.n_1201-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR768VNZ_ChIP_ZSCAN30_HEK293_ENCSR210YNP_counts_pattern_4.n_1008-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR768VNZ_ChIP_ZSCAN30_HEK293_ENCSR210YNP_counts_pattern_5.n_658-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR768VNZ_ChIP_ZSCAN30_HEK293_ENCSR210YNP_counts_pattern_6.n_486-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR768VNZ_ChIP_ZSCAN30_HEK293_ENCSR210YNP_counts_pattern_7.n_343-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR768VNZ_ChIP_ZSCAN30_HEK293_ENCSR210YNP_counts_pattern_8.n_330-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR768VNZ_ChIP_ZSCAN30_HEK293_ENCSR210YNP_counts_pattern_9.n_280-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_counts_pattern_0.n_637-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_counts_pattern_10.n_207-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_counts_pattern_11.n_198-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_counts_pattern_12.n_195-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_counts_pattern_13.n_192-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_counts_pattern_14.n_172-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_counts_pattern_15.n_170-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_counts_pattern_16.n_159-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_counts_pattern_17.n_146-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_counts_pattern_18.n_140-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_counts_pattern_19.n_134-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_counts_pattern_1.n_606-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_counts_pattern_20.n_125-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_counts_pattern_21.n_105-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_counts_pattern_22.n_102-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_counts_pattern_23.n_102-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_counts_pattern_24.n_98-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_counts_pattern_25.n_75-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_counts_pattern_26.n_66-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_counts_pattern_27.n_56-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_counts_pattern_28.n_46-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_counts_pattern_29.n_41-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_counts_pattern_2.n_334-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_counts_pattern_3.n_284-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_counts_pattern_4.n_240-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_counts_pattern_5.n_240-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_counts_pattern_6.n_237-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_counts_pattern_7.n_234-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_counts_pattern_8.n_224-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_counts_pattern_9.n_224-vs-ZSCAN30-201.alignment counts-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN31-201/Hughes_GR_models_ZSCAN31_counts-pos.pattern_0.n_304-vs-ZSCAN31-201.alignment counts-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN31-201/Hughes_NB_models_ZSCAN31_counts-pos.pattern_0.n_754-vs-ZSCAN31-201.alignment counts-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_counts_pattern_0.n_2087-vs-ZSCAN31-201.alignment counts-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_counts_pattern_10.n_340-vs-ZSCAN31-201.alignment counts-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_counts_pattern_11.n_310-vs-ZSCAN31-201.alignment counts-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_counts_pattern_12.n_300-vs-ZSCAN31-201.alignment counts-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_counts_pattern_13.n_297-vs-ZSCAN31-201.alignment counts-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_counts_pattern_14.n_276-vs-ZSCAN31-201.alignment counts-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_counts_pattern_15.n_246-vs-ZSCAN31-201.alignment counts-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_counts_pattern_16.n_242-vs-ZSCAN31-201.alignment counts-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_counts_pattern_17.n_236-vs-ZSCAN31-201.alignment counts-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_counts_pattern_18.n_197-vs-ZSCAN31-201.alignment counts-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_counts_pattern_19.n_72-vs-ZSCAN31-201.alignment counts-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_counts_pattern_1.n_2006-vs-ZSCAN31-201.alignment counts-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_counts_pattern_20.n_67-vs-ZSCAN31-201.alignment counts-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_counts_pattern_21.n_57-vs-ZSCAN31-201.alignment counts-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_counts_pattern_22.n_48-vs-ZSCAN31-201.alignment counts-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_counts_pattern_23.n_47-vs-ZSCAN31-201.alignment counts-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_counts_pattern_24.n_43-vs-ZSCAN31-201.alignment counts-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_counts_pattern_25.n_37-vs-ZSCAN31-201.alignment counts-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_counts_pattern_2.n_1974-vs-ZSCAN31-201.alignment counts-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_counts_pattern_3.n_1691-vs-ZSCAN31-201.alignment counts-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_counts_pattern_4.n_1490-vs-ZSCAN31-201.alignment counts-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_counts_pattern_5.n_1436-vs-ZSCAN31-201.alignment counts-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_counts_pattern_6.n_549-vs-ZSCAN31-201.alignment counts-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_counts_pattern_7.n_466-vs-ZSCAN31-201.alignment counts-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_counts_pattern_8.n_461-vs-ZSCAN31-201.alignment counts-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_counts_pattern_9.n_415-vs-ZSCAN31-201.alignment counts-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN32-202/neg_patterns.ENCSR870YEN_ChIP_ZSCAN32_K562_ENCSR426PPK_counts_pattern_0.n_453-vs-ZSCAN32-202.alignment counts-znf_b1h_alignment/ZSCAN32-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN32-202/neg_patterns.ENCSR870YEN_ChIP_ZSCAN32_K562_ENCSR426PPK_counts_pattern_1.n_41-vs-ZSCAN32-202.alignment counts-znf_b1h_alignment/ZSCAN32-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN32-202/neg_patterns.ENCSR870YEN_ChIP_ZSCAN32_K562_ENCSR426PPK_counts_pattern_2.n_29-vs-ZSCAN32-202.alignment counts-znf_b1h_alignment/ZSCAN32-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN32-202/neg_patterns.ENCSR870YEN_ChIP_ZSCAN32_K562_ENCSR426PPK_counts_pattern_3.n_27-vs-ZSCAN32-202.alignment counts-znf_b1h_alignment/ZSCAN32-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN32-202/neg_patterns.ENCSR870YEN_ChIP_ZSCAN32_K562_ENCSR426PPK_counts_pattern_4.n_25-vs-ZSCAN32-202.alignment counts-znf_b1h_alignment/ZSCAN32-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN32-202/pos_patterns.ENCSR870YEN_ChIP_ZSCAN32_K562_ENCSR426PPK_counts_pattern_0.n_2158-vs-ZSCAN32-202.alignment counts-znf_b1h_alignment/ZSCAN32-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN32-202/pos_patterns.ENCSR870YEN_ChIP_ZSCAN32_K562_ENCSR426PPK_counts_pattern_1.n_463-vs-ZSCAN32-202.alignment counts-znf_b1h_alignment/ZSCAN32-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN32-202/pos_patterns.ENCSR870YEN_ChIP_ZSCAN32_K562_ENCSR426PPK_counts_pattern_2.n_59-vs-ZSCAN32-202.alignment counts-znf_b1h_alignment/ZSCAN32-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN32-202/pos_patterns.ENCSR870YEN_ChIP_ZSCAN32_K562_ENCSR426PPK_counts_pattern_3.n_43-vs-ZSCAN32-202.alignment counts-znf_b1h_alignment/ZSCAN32-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN32-202/pos_patterns.ENCSR870YEN_ChIP_ZSCAN32_K562_ENCSR426PPK_counts_pattern_4.n_38-vs-ZSCAN32-202.alignment counts-znf_b1h_alignment/ZSCAN32-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN32-202/pos_patterns.ENCSR870YEN_ChIP_ZSCAN32_K562_ENCSR426PPK_counts_pattern_5.n_21-vs-ZSCAN32-202.alignment counts-znf_b1h_alignment/ZSCAN32-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN4-201/pos_patterns.ENCSR211GNP_ChIP_ZSCAN4_HEK293_ENCSR931GRD_counts_pattern_0.n_20503-vs-ZSCAN4-201.alignment counts-znf_b1h_alignment/ZSCAN4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN4-201/pos_patterns.ENCSR211GNP_ChIP_ZSCAN4_HEK293_ENCSR931GRD_counts_pattern_10.n_26-vs-ZSCAN4-201.alignment counts-znf_b1h_alignment/ZSCAN4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN4-201/pos_patterns.ENCSR211GNP_ChIP_ZSCAN4_HEK293_ENCSR931GRD_counts_pattern_11.n_22-vs-ZSCAN4-201.alignment counts-znf_b1h_alignment/ZSCAN4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN4-201/pos_patterns.ENCSR211GNP_ChIP_ZSCAN4_HEK293_ENCSR931GRD_counts_pattern_1.n_1877-vs-ZSCAN4-201.alignment counts-znf_b1h_alignment/ZSCAN4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN4-201/pos_patterns.ENCSR211GNP_ChIP_ZSCAN4_HEK293_ENCSR931GRD_counts_pattern_2.n_674-vs-ZSCAN4-201.alignment counts-znf_b1h_alignment/ZSCAN4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN4-201/pos_patterns.ENCSR211GNP_ChIP_ZSCAN4_HEK293_ENCSR931GRD_counts_pattern_3.n_383-vs-ZSCAN4-201.alignment counts-znf_b1h_alignment/ZSCAN4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN4-201/pos_patterns.ENCSR211GNP_ChIP_ZSCAN4_HEK293_ENCSR931GRD_counts_pattern_4.n_228-vs-ZSCAN4-201.alignment counts-znf_b1h_alignment/ZSCAN4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN4-201/pos_patterns.ENCSR211GNP_ChIP_ZSCAN4_HEK293_ENCSR931GRD_counts_pattern_5.n_131-vs-ZSCAN4-201.alignment counts-znf_b1h_alignment/ZSCAN4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN4-201/pos_patterns.ENCSR211GNP_ChIP_ZSCAN4_HEK293_ENCSR931GRD_counts_pattern_6.n_109-vs-ZSCAN4-201.alignment counts-znf_b1h_alignment/ZSCAN4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN4-201/pos_patterns.ENCSR211GNP_ChIP_ZSCAN4_HEK293_ENCSR931GRD_counts_pattern_7.n_101-vs-ZSCAN4-201.alignment counts-znf_b1h_alignment/ZSCAN4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN4-201/pos_patterns.ENCSR211GNP_ChIP_ZSCAN4_HEK293_ENCSR931GRD_counts_pattern_8.n_95-vs-ZSCAN4-201.alignment counts-znf_b1h_alignment/ZSCAN4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN4-201/pos_patterns.ENCSR211GNP_ChIP_ZSCAN4_HEK293_ENCSR931GRD_counts_pattern_9.n_86-vs-ZSCAN4-201.alignment counts-znf_b1h_alignment/ZSCAN4-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN5A-201/pos_patterns.ENCSR216GKQ_ChIP_ZSCAN5A_HepG2_ENCSR354THL_counts_pattern_0.n_1972-vs-ZSCAN5A-201.alignment counts-znf_b1h_alignment/ZSCAN5A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN5A-201/pos_patterns.ENCSR216GKQ_ChIP_ZSCAN5A_HepG2_ENCSR354THL_counts_pattern_10.n_265-vs-ZSCAN5A-201.alignment counts-znf_b1h_alignment/ZSCAN5A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN5A-201/pos_patterns.ENCSR216GKQ_ChIP_ZSCAN5A_HepG2_ENCSR354THL_counts_pattern_11.n_233-vs-ZSCAN5A-201.alignment counts-znf_b1h_alignment/ZSCAN5A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN5A-201/pos_patterns.ENCSR216GKQ_ChIP_ZSCAN5A_HepG2_ENCSR354THL_counts_pattern_12.n_166-vs-ZSCAN5A-201.alignment counts-znf_b1h_alignment/ZSCAN5A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN5A-201/pos_patterns.ENCSR216GKQ_ChIP_ZSCAN5A_HepG2_ENCSR354THL_counts_pattern_13.n_116-vs-ZSCAN5A-201.alignment counts-znf_b1h_alignment/ZSCAN5A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN5A-201/pos_patterns.ENCSR216GKQ_ChIP_ZSCAN5A_HepG2_ENCSR354THL_counts_pattern_14.n_115-vs-ZSCAN5A-201.alignment counts-znf_b1h_alignment/ZSCAN5A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN5A-201/pos_patterns.ENCSR216GKQ_ChIP_ZSCAN5A_HepG2_ENCSR354THL_counts_pattern_15.n_104-vs-ZSCAN5A-201.alignment counts-znf_b1h_alignment/ZSCAN5A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN5A-201/pos_patterns.ENCSR216GKQ_ChIP_ZSCAN5A_HepG2_ENCSR354THL_counts_pattern_16.n_81-vs-ZSCAN5A-201.alignment counts-znf_b1h_alignment/ZSCAN5A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN5A-201/pos_patterns.ENCSR216GKQ_ChIP_ZSCAN5A_HepG2_ENCSR354THL_counts_pattern_17.n_43-vs-ZSCAN5A-201.alignment counts-znf_b1h_alignment/ZSCAN5A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN5A-201/pos_patterns.ENCSR216GKQ_ChIP_ZSCAN5A_HepG2_ENCSR354THL_counts_pattern_18.n_21-vs-ZSCAN5A-201.alignment counts-znf_b1h_alignment/ZSCAN5A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN5A-201/pos_patterns.ENCSR216GKQ_ChIP_ZSCAN5A_HepG2_ENCSR354THL_counts_pattern_1.n_1644-vs-ZSCAN5A-201.alignment counts-znf_b1h_alignment/ZSCAN5A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN5A-201/pos_patterns.ENCSR216GKQ_ChIP_ZSCAN5A_HepG2_ENCSR354THL_counts_pattern_2.n_1349-vs-ZSCAN5A-201.alignment counts-znf_b1h_alignment/ZSCAN5A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN5A-201/pos_patterns.ENCSR216GKQ_ChIP_ZSCAN5A_HepG2_ENCSR354THL_counts_pattern_3.n_707-vs-ZSCAN5A-201.alignment counts-znf_b1h_alignment/ZSCAN5A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN5A-201/pos_patterns.ENCSR216GKQ_ChIP_ZSCAN5A_HepG2_ENCSR354THL_counts_pattern_4.n_455-vs-ZSCAN5A-201.alignment counts-znf_b1h_alignment/ZSCAN5A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN5A-201/pos_patterns.ENCSR216GKQ_ChIP_ZSCAN5A_HepG2_ENCSR354THL_counts_pattern_5.n_440-vs-ZSCAN5A-201.alignment counts-znf_b1h_alignment/ZSCAN5A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN5A-201/pos_patterns.ENCSR216GKQ_ChIP_ZSCAN5A_HepG2_ENCSR354THL_counts_pattern_6.n_388-vs-ZSCAN5A-201.alignment counts-znf_b1h_alignment/ZSCAN5A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN5A-201/pos_patterns.ENCSR216GKQ_ChIP_ZSCAN5A_HepG2_ENCSR354THL_counts_pattern_7.n_386-vs-ZSCAN5A-201.alignment counts-znf_b1h_alignment/ZSCAN5A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN5A-201/pos_patterns.ENCSR216GKQ_ChIP_ZSCAN5A_HepG2_ENCSR354THL_counts_pattern_8.n_352-vs-ZSCAN5A-201.alignment counts-znf_b1h_alignment/ZSCAN5A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN5A-201/pos_patterns.ENCSR216GKQ_ChIP_ZSCAN5A_HepG2_ENCSR354THL_counts_pattern_9.n_270-vs-ZSCAN5A-201.alignment counts-znf_b1h_alignment/ZSCAN5A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN5A-201/pos_patterns.ENCSR357QJR_ChIP_ZSCAN5A_HEK293_ENCSR766IDI_counts_pattern_0.n_1836-vs-ZSCAN5A-201.alignment counts-znf_b1h_alignment/ZSCAN5A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN5A-201/pos_patterns.ENCSR357QJR_ChIP_ZSCAN5A_HEK293_ENCSR766IDI_counts_pattern_1.n_1261-vs-ZSCAN5A-201.alignment counts-znf_b1h_alignment/ZSCAN5A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN5A-201/pos_patterns.ENCSR357QJR_ChIP_ZSCAN5A_HEK293_ENCSR766IDI_counts_pattern_2.n_963-vs-ZSCAN5A-201.alignment counts-znf_b1h_alignment/ZSCAN5A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN5A-201/pos_patterns.ENCSR357QJR_ChIP_ZSCAN5A_HEK293_ENCSR766IDI_counts_pattern_3.n_788-vs-ZSCAN5A-201.alignment counts-znf_b1h_alignment/ZSCAN5A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN5A-201/pos_patterns.ENCSR357QJR_ChIP_ZSCAN5A_HEK293_ENCSR766IDI_counts_pattern_4.n_225-vs-ZSCAN5A-201.alignment counts-znf_b1h_alignment/ZSCAN5A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN5A-201/pos_patterns.ENCSR357QJR_ChIP_ZSCAN5A_HEK293_ENCSR766IDI_counts_pattern_5.n_132-vs-ZSCAN5A-201.alignment counts-znf_b1h_alignment/ZSCAN5A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN5A-201/pos_patterns.ENCSR357QJR_ChIP_ZSCAN5A_HEK293_ENCSR766IDI_counts_pattern_6.n_99-vs-ZSCAN5A-201.alignment counts-znf_b1h_alignment/ZSCAN5A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN5A-201/pos_patterns.ENCSR357QJR_ChIP_ZSCAN5A_HEK293_ENCSR766IDI_counts_pattern_7.n_47-vs-ZSCAN5A-201.alignment counts-znf_b1h_alignment/ZSCAN5A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN5C-202/Hughes_GR_models_ZSCAN5C_counts-pos.pattern_0.n_286-vs-ZSCAN5C-202.alignment counts-znf_b1h_alignment/ZSCAN5C-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN5C-202/Hughes_GR_models_ZSCAN5C_counts-pos.pattern_1.n_225-vs-ZSCAN5C-202.alignment counts-znf_b1h_alignment/ZSCAN5C-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN5C-202/Hughes_GR_models_ZSCAN5C_counts-pos.pattern_2.n_60-vs-ZSCAN5C-202.alignment counts-znf_b1h_alignment/ZSCAN5C-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN5C-202/Hughes_GR_models_ZSCAN5C_counts-pos.pattern_3.n_54-vs-ZSCAN5C-202.alignment counts-znf_b1h_alignment/ZSCAN5C-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN5C-202/Hughes_GR_models_ZSCAN5C_counts-pos.pattern_4.n_41-vs-ZSCAN5C-202.alignment counts-znf_b1h_alignment/ZSCAN5C-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN5C-202/pos_patterns.ENCSR731AGO_ChIP_ZSCAN5C_HEK293_ENCSR905ZVU_counts_pattern_0.n_6335-vs-ZSCAN5C-202.alignment counts-znf_b1h_alignment/ZSCAN5C-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN5C-202/pos_patterns.ENCSR731AGO_ChIP_ZSCAN5C_HEK293_ENCSR905ZVU_counts_pattern_1.n_1795-vs-ZSCAN5C-202.alignment counts-znf_b1h_alignment/ZSCAN5C-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN5C-202/pos_patterns.ENCSR731AGO_ChIP_ZSCAN5C_HEK293_ENCSR905ZVU_counts_pattern_2.n_1055-vs-ZSCAN5C-202.alignment counts-znf_b1h_alignment/ZSCAN5C-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN5C-202/pos_patterns.ENCSR731AGO_ChIP_ZSCAN5C_HEK293_ENCSR905ZVU_counts_pattern_3.n_419-vs-ZSCAN5C-202.alignment counts-znf_b1h_alignment/ZSCAN5C-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN5C-202/pos_patterns.ENCSR731AGO_ChIP_ZSCAN5C_HEK293_ENCSR905ZVU_counts_pattern_4.n_68-vs-ZSCAN5C-202.alignment counts-znf_b1h_alignment/ZSCAN5C-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN5C-202/pos_patterns.ENCSR731AGO_ChIP_ZSCAN5C_HEK293_ENCSR905ZVU_counts_pattern_5.n_25-vs-ZSCAN5C-202.alignment counts-znf_b1h_alignment/ZSCAN5C-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN9-201/pos_patterns.ENCSR712FAM_ChIP_ZSCAN9_HepG2_ENCSR755NSQ_counts_pattern_0.n_4298-vs-ZSCAN9-201.alignment counts-znf_b1h_alignment/ZSCAN9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN9-201/pos_patterns.ENCSR712FAM_ChIP_ZSCAN9_HepG2_ENCSR755NSQ_counts_pattern_10.n_32-vs-ZSCAN9-201.alignment counts-znf_b1h_alignment/ZSCAN9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN9-201/pos_patterns.ENCSR712FAM_ChIP_ZSCAN9_HepG2_ENCSR755NSQ_counts_pattern_1.n_2643-vs-ZSCAN9-201.alignment counts-znf_b1h_alignment/ZSCAN9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN9-201/pos_patterns.ENCSR712FAM_ChIP_ZSCAN9_HepG2_ENCSR755NSQ_counts_pattern_2.n_1790-vs-ZSCAN9-201.alignment counts-znf_b1h_alignment/ZSCAN9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN9-201/pos_patterns.ENCSR712FAM_ChIP_ZSCAN9_HepG2_ENCSR755NSQ_counts_pattern_3.n_1024-vs-ZSCAN9-201.alignment counts-znf_b1h_alignment/ZSCAN9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN9-201/pos_patterns.ENCSR712FAM_ChIP_ZSCAN9_HepG2_ENCSR755NSQ_counts_pattern_4.n_637-vs-ZSCAN9-201.alignment counts-znf_b1h_alignment/ZSCAN9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN9-201/pos_patterns.ENCSR712FAM_ChIP_ZSCAN9_HepG2_ENCSR755NSQ_counts_pattern_5.n_610-vs-ZSCAN9-201.alignment counts-znf_b1h_alignment/ZSCAN9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN9-201/pos_patterns.ENCSR712FAM_ChIP_ZSCAN9_HepG2_ENCSR755NSQ_counts_pattern_6.n_588-vs-ZSCAN9-201.alignment counts-znf_b1h_alignment/ZSCAN9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN9-201/pos_patterns.ENCSR712FAM_ChIP_ZSCAN9_HepG2_ENCSR755NSQ_counts_pattern_7.n_515-vs-ZSCAN9-201.alignment counts-znf_b1h_alignment/ZSCAN9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN9-201/pos_patterns.ENCSR712FAM_ChIP_ZSCAN9_HepG2_ENCSR755NSQ_counts_pattern_8.n_274-vs-ZSCAN9-201.alignment counts-znf_b1h_alignment/ZSCAN9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZSCAN9-201/pos_patterns.ENCSR712FAM_ChIP_ZSCAN9_HepG2_ENCSR755NSQ_counts_pattern_9.n_169-vs-ZSCAN9-201.alignment counts-znf_b1h_alignment/ZSCAN9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_counts_pattern_0.n_3521-vs-ZXDB-201.alignment counts-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_counts_pattern_10.n_325-vs-ZXDB-201.alignment counts-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_counts_pattern_11.n_317-vs-ZXDB-201.alignment counts-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_counts_pattern_12.n_279-vs-ZXDB-201.alignment counts-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_counts_pattern_13.n_270-vs-ZXDB-201.alignment counts-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_counts_pattern_14.n_205-vs-ZXDB-201.alignment counts-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_counts_pattern_15.n_194-vs-ZXDB-201.alignment counts-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_counts_pattern_16.n_149-vs-ZXDB-201.alignment counts-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_counts_pattern_17.n_107-vs-ZXDB-201.alignment counts-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_counts_pattern_18.n_64-vs-ZXDB-201.alignment counts-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_counts_pattern_19.n_58-vs-ZXDB-201.alignment counts-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_counts_pattern_1.n_2699-vs-ZXDB-201.alignment counts-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_counts_pattern_20.n_51-vs-ZXDB-201.alignment counts-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_counts_pattern_21.n_51-vs-ZXDB-201.alignment counts-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_counts_pattern_22.n_39-vs-ZXDB-201.alignment counts-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_counts_pattern_23.n_28-vs-ZXDB-201.alignment counts-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_counts_pattern_24.n_26-vs-ZXDB-201.alignment counts-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_counts_pattern_2.n_2306-vs-ZXDB-201.alignment counts-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_counts_pattern_3.n_2057-vs-ZXDB-201.alignment counts-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_counts_pattern_4.n_1951-vs-ZXDB-201.alignment counts-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_counts_pattern_5.n_1726-vs-ZXDB-201.alignment counts-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_counts_pattern_6.n_1594-vs-ZXDB-201.alignment counts-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_counts_pattern_7.n_1457-vs-ZXDB-201.alignment counts-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_counts_pattern_8.n_813-vs-ZXDB-201.alignment counts-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_counts_pattern_9.n_538-vs-ZXDB-201.alignment counts-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZXDC-202/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_counts_pattern_0.n_1712-vs-ZXDC-202.alignment counts-znf_b1h_alignment/ZXDC-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZXDC-202/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_counts_pattern_1.n_1531-vs-ZXDC-202.alignment counts-znf_b1h_alignment/ZXDC-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZXDC-202/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_counts_pattern_2.n_1214-vs-ZXDC-202.alignment counts-znf_b1h_alignment/ZXDC-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZXDC-202/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_counts_pattern_3.n_832-vs-ZXDC-202.alignment counts-znf_b1h_alignment/ZXDC-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZXDC-202/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_counts_pattern_4.n_204-vs-ZXDC-202.alignment counts-znf_b1h_alignment/ZXDC-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZXDC-202/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_counts_pattern_5.n_141-vs-ZXDC-202.alignment counts-znf_b1h_alignment/ZXDC-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZXDC-202/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_counts_pattern_6.n_20-vs-ZXDC-202.alignment counts-znf_b1h_alignment/ZXDC-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZXDC-204/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_counts_pattern_0.n_1712-vs-ZXDC-204.alignment counts-znf_b1h_alignment/ZXDC-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZXDC-204/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_counts_pattern_1.n_1531-vs-ZXDC-204.alignment counts-znf_b1h_alignment/ZXDC-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZXDC-204/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_counts_pattern_2.n_1214-vs-ZXDC-204.alignment counts-znf_b1h_alignment/ZXDC-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZXDC-204/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_counts_pattern_3.n_832-vs-ZXDC-204.alignment counts-znf_b1h_alignment/ZXDC-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZXDC-204/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_counts_pattern_4.n_204-vs-ZXDC-204.alignment counts-znf_b1h_alignment/ZXDC-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZXDC-204/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_counts_pattern_5.n_141-vs-ZXDC-204.alignment counts-znf_b1h_alignment/ZXDC-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py counts-znf_b1h_alignment/ZXDC-204/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_counts_pattern_6.n_20-vs-ZXDC-204.alignment counts-znf_b1h_alignment/ZXDC-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF100-201/ChipExo_models_ZNF100_profile-pos.pattern_0.n_3498-vs-ZNF100-201.alignment profile-znf_b1h_alignment/ZNF100-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF100-201/ChipExo_models_ZNF100_profile-pos.pattern_1.n_247-vs-ZNF100-201.alignment profile-znf_b1h_alignment/ZNF100-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF100-201/ChipExo_models_ZNF100_profile-pos.pattern_2.n_72-vs-ZNF100-201.alignment profile-znf_b1h_alignment/ZNF100-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF100-201/ChipExo_models_ZNF100_profile-pos.pattern_3.n_43-vs-ZNF100-201.alignment profile-znf_b1h_alignment/ZNF100-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF100-201/ChipExo_models_ZNF100_profile-pos.pattern_4.n_41-vs-ZNF100-201.alignment profile-znf_b1h_alignment/ZNF100-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF100-201/ChipExo_models_ZNF100_profile-pos.pattern_5.n_25-vs-ZNF100-201.alignment profile-znf_b1h_alignment/ZNF100-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF100-201/ChipExo_models_ZNF100_profile-pos.pattern_6.n_23-vs-ZNF100-201.alignment profile-znf_b1h_alignment/ZNF100-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF100-201/ChipExo_models_ZNF100_profile-pos.pattern_7.n_22-vs-ZNF100-201.alignment profile-znf_b1h_alignment/ZNF100-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF101-201/ChipExo_models_ZNF101_profile-pos.pattern_0.n_2356-vs-ZNF101-201.alignment profile-znf_b1h_alignment/ZNF101-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF101-201/ChipExo_models_ZNF101_profile-pos.pattern_1.n_63-vs-ZNF101-201.alignment profile-znf_b1h_alignment/ZNF101-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF101-201/ChipExo_models_ZNF101_profile-pos.pattern_2.n_21-vs-ZNF101-201.alignment profile-znf_b1h_alignment/ZNF101-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF101-201/pos_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_profile_pattern_0.n_664-vs-ZNF101-201.alignment profile-znf_b1h_alignment/ZNF101-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF101-201/pos_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_profile_pattern_10.n_83-vs-ZNF101-201.alignment profile-znf_b1h_alignment/ZNF101-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF101-201/pos_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_profile_pattern_11.n_73-vs-ZNF101-201.alignment profile-znf_b1h_alignment/ZNF101-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF101-201/pos_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_profile_pattern_12.n_72-vs-ZNF101-201.alignment profile-znf_b1h_alignment/ZNF101-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF101-201/pos_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_profile_pattern_13.n_64-vs-ZNF101-201.alignment profile-znf_b1h_alignment/ZNF101-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF101-201/pos_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_profile_pattern_14.n_50-vs-ZNF101-201.alignment profile-znf_b1h_alignment/ZNF101-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF101-201/pos_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_profile_pattern_15.n_48-vs-ZNF101-201.alignment profile-znf_b1h_alignment/ZNF101-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF101-201/pos_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_profile_pattern_16.n_43-vs-ZNF101-201.alignment profile-znf_b1h_alignment/ZNF101-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF101-201/pos_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_profile_pattern_17.n_25-vs-ZNF101-201.alignment profile-znf_b1h_alignment/ZNF101-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF101-201/pos_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_profile_pattern_1.n_468-vs-ZNF101-201.alignment profile-znf_b1h_alignment/ZNF101-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF101-201/pos_patterns.ENCSR519QYU_ChIP_ZNF101_HepG2_ENCSR909TXF_profile_pattern_2.n_354-vs-ZNF101-201.alignment profile-znf_b1h_alignment/ZNF101-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF112-201/pos_patterns.ENCSR751PNN_ChIP_ZNF112_HEK293_ENCSR680TYT_profile_pattern_4.n_26-vs-ZNF112-201.alignment profile-znf_b1h_alignment/ZNF112-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF114-201/ChipExo_models_ZNF114_profile-pos.pattern_0.n_111-vs-ZNF114-201.alignment profile-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF114-201/ChipExo_models_ZNF114_profile-pos.pattern_1.n_56-vs-ZNF114-201.alignment profile-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF114-201/ChipExo_models_ZNF114_profile-pos.pattern_2.n_46-vs-ZNF114-201.alignment profile-znf_b1h_alignment/ZNF114-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF114-201/ChipExo_models_ZNF114_profile-pos.pattern_5.n_20-vs-ZNF114-201.alignment profile-znf_b1h_alignment/ZNF114-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_profile_pattern_0.n_526-vs-ZNF114-201.alignment profile-znf_b1h_alignment/ZNF114-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_profile_pattern_11.n_54-vs-ZNF114-201.alignment profile-znf_b1h_alignment/ZNF114-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_profile_pattern_13.n_32-vs-ZNF114-201.alignment profile-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_profile_pattern_14.n_28-vs-ZNF114-201.alignment profile-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_profile_pattern_15.n_24-vs-ZNF114-201.alignment profile-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_profile_pattern_1.n_523-vs-ZNF114-201.alignment profile-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_profile_pattern_2.n_247-vs-ZNF114-201.alignment profile-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_profile_pattern_3.n_159-vs-ZNF114-201.alignment profile-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_profile_pattern_4.n_157-vs-ZNF114-201.alignment profile-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_profile_pattern_5.n_129-vs-ZNF114-201.alignment profile-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_profile_pattern_6.n_120-vs-ZNF114-201.alignment profile-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_profile_pattern_7.n_111-vs-ZNF114-201.alignment profile-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_profile_pattern_8.n_96-vs-ZNF114-201.alignment profile-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR555KFE_ChIP_ZNF114_GM23338_ENCSR504DWQ_profile_pattern_9.n_71-vs-ZNF114-201.alignment profile-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR985MYI_ChIP_ZNF114_HEK293_ENCSR862ZYU_profile_pattern_0.n_175-vs-ZNF114-201.alignment profile-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR985MYI_ChIP_ZNF114_HEK293_ENCSR862ZYU_profile_pattern_1.n_101-vs-ZNF114-201.alignment profile-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR985MYI_ChIP_ZNF114_HEK293_ENCSR862ZYU_profile_pattern_2.n_46-vs-ZNF114-201.alignment profile-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR985MYI_ChIP_ZNF114_HEK293_ENCSR862ZYU_profile_pattern_3.n_44-vs-ZNF114-201.alignment profile-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR985MYI_ChIP_ZNF114_HEK293_ENCSR862ZYU_profile_pattern_4.n_37-vs-ZNF114-201.alignment profile-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR985MYI_ChIP_ZNF114_HEK293_ENCSR862ZYU_profile_pattern_5.n_26-vs-ZNF114-201.alignment profile-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF114-201/pos_patterns.ENCSR985MYI_ChIP_ZNF114_HEK293_ENCSR862ZYU_profile_pattern_6.n_26-vs-ZNF114-201.alignment profile-znf_b1h_alignment/ZNF114-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/Hughes_GR_models_ZNF121_profile-neg.pattern_0.n_418-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/Hughes_GR_models_ZNF121_profile-neg.pattern_10.n_46-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/Hughes_GR_models_ZNF121_profile-neg.pattern_11.n_43-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/Hughes_GR_models_ZNF121_profile-neg.pattern_12.n_38-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/Hughes_GR_models_ZNF121_profile-neg.pattern_1.n_377-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/Hughes_GR_models_ZNF121_profile-neg.pattern_2.n_260-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/Hughes_GR_models_ZNF121_profile-neg.pattern_3.n_138-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/Hughes_GR_models_ZNF121_profile-neg.pattern_4.n_136-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/Hughes_GR_models_ZNF121_profile-neg.pattern_5.n_116-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/Hughes_GR_models_ZNF121_profile-neg.pattern_6.n_116-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/Hughes_GR_models_ZNF121_profile-neg.pattern_7.n_90-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/Hughes_GR_models_ZNF121_profile-neg.pattern_8.n_90-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/Hughes_GR_models_ZNF121_profile-neg.pattern_9.n_69-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/Hughes_GR_models_ZNF121_profile-pos.pattern_1.n_696-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/Hughes_GR_models_ZNF121_profile-pos.pattern_2.n_343-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/Hughes_GR_models_ZNF121_profile-pos.pattern_3.n_235-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/Hughes_GR_models_ZNF121_profile-pos.pattern_4.n_143-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/Hughes_GR_models_ZNF121_profile-pos.pattern_5.n_67-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/Hughes_GR_models_ZNF121_profile-pos.pattern_6.n_58-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/Hughes_GR_models_ZNF121_profile-pos.pattern_7.n_55-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/Hughes_GR_models_ZNF121_profile-pos.pattern_8.n_39-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/Hughes_GR_models_ZNF121_profile-pos.pattern_9.n_38-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_profile_pattern_0.n_2031-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_profile_pattern_10.n_106-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_profile_pattern_11.n_83-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_profile_pattern_12.n_59-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_profile_pattern_13.n_39-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_profile_pattern_1.n_533-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_profile_pattern_2.n_527-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_profile_pattern_3.n_379-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_profile_pattern_4.n_335-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_profile_pattern_5.n_299-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_profile_pattern_6.n_282-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_profile_pattern_7.n_168-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_profile_pattern_8.n_138-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_profile_pattern_9.n_133-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR224QDY_ChIP_ZNF121_HEK293_ENCSR370XXE_profile_pattern_0.n_1019-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR224QDY_ChIP_ZNF121_HEK293_ENCSR370XXE_profile_pattern_10.n_101-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR224QDY_ChIP_ZNF121_HEK293_ENCSR370XXE_profile_pattern_11.n_92-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR224QDY_ChIP_ZNF121_HEK293_ENCSR370XXE_profile_pattern_12.n_52-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR224QDY_ChIP_ZNF121_HEK293_ENCSR370XXE_profile_pattern_13.n_37-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR224QDY_ChIP_ZNF121_HEK293_ENCSR370XXE_profile_pattern_14.n_32-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR224QDY_ChIP_ZNF121_HEK293_ENCSR370XXE_profile_pattern_15.n_31-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR224QDY_ChIP_ZNF121_HEK293_ENCSR370XXE_profile_pattern_16.n_29-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR224QDY_ChIP_ZNF121_HEK293_ENCSR370XXE_profile_pattern_1.n_645-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR224QDY_ChIP_ZNF121_HEK293_ENCSR370XXE_profile_pattern_2.n_509-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR224QDY_ChIP_ZNF121_HEK293_ENCSR370XXE_profile_pattern_3.n_244-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR224QDY_ChIP_ZNF121_HEK293_ENCSR370XXE_profile_pattern_4.n_214-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR224QDY_ChIP_ZNF121_HEK293_ENCSR370XXE_profile_pattern_5.n_185-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR224QDY_ChIP_ZNF121_HEK293_ENCSR370XXE_profile_pattern_6.n_181-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR224QDY_ChIP_ZNF121_HEK293_ENCSR370XXE_profile_pattern_7.n_147-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR224QDY_ChIP_ZNF121_HEK293_ENCSR370XXE_profile_pattern_8.n_140-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR224QDY_ChIP_ZNF121_HEK293_ENCSR370XXE_profile_pattern_9.n_113-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR799URB_ChIP_ZNF121_K562_ENCSR391MTA_profile_pattern_0.n_1463-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR799URB_ChIP_ZNF121_K562_ENCSR391MTA_profile_pattern_1.n_301-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR799URB_ChIP_ZNF121_K562_ENCSR391MTA_profile_pattern_2.n_192-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR799URB_ChIP_ZNF121_K562_ENCSR391MTA_profile_pattern_3.n_154-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR799URB_ChIP_ZNF121_K562_ENCSR391MTA_profile_pattern_4.n_140-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR799URB_ChIP_ZNF121_K562_ENCSR391MTA_profile_pattern_5.n_127-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR799URB_ChIP_ZNF121_K562_ENCSR391MTA_profile_pattern_6.n_92-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR799URB_ChIP_ZNF121_K562_ENCSR391MTA_profile_pattern_7.n_25-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_profile_pattern_0.n_2480-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_profile_pattern_10.n_96-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_profile_pattern_11.n_73-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_profile_pattern_12.n_66-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_profile_pattern_13.n_42-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_profile_pattern_14.n_35-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_profile_pattern_15.n_28-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_profile_pattern_16.n_26-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_profile_pattern_17.n_25-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_profile_pattern_18.n_22-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_profile_pattern_1.n_2306-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_profile_pattern_2.n_724-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_profile_pattern_3.n_394-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_profile_pattern_4.n_364-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_profile_pattern_5.n_296-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_profile_pattern_6.n_219-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_profile_pattern_7.n_182-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_profile_pattern_8.n_135-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/neg_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_profile_pattern_9.n_111-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_profile_pattern_0.n_19729-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_profile_pattern_10.n_165-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_profile_pattern_11.n_159-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_profile_pattern_12.n_158-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_profile_pattern_13.n_153-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_profile_pattern_14.n_146-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_profile_pattern_15.n_129-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_profile_pattern_16.n_117-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_profile_pattern_17.n_113-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_profile_pattern_18.n_88-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_profile_pattern_19.n_72-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_profile_pattern_1.n_1003-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_profile_pattern_20.n_55-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_profile_pattern_21.n_54-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_profile_pattern_22.n_30-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_profile_pattern_23.n_22-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_profile_pattern_2.n_522-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_profile_pattern_3.n_451-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_profile_pattern_4.n_313-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_profile_pattern_5.n_248-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_profile_pattern_6.n_245-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_profile_pattern_7.n_238-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_profile_pattern_8.n_214-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR203PCF_ChIP_ZNF121_WTC11_ENCSR061EQE_profile_pattern_9.n_188-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR224QDY_ChIP_ZNF121_HEK293_ENCSR370XXE_profile_pattern_0.n_20594-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR224QDY_ChIP_ZNF121_HEK293_ENCSR370XXE_profile_pattern_1.n_751-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR224QDY_ChIP_ZNF121_HEK293_ENCSR370XXE_profile_pattern_2.n_602-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR224QDY_ChIP_ZNF121_HEK293_ENCSR370XXE_profile_pattern_3.n_490-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR224QDY_ChIP_ZNF121_HEK293_ENCSR370XXE_profile_pattern_4.n_224-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR224QDY_ChIP_ZNF121_HEK293_ENCSR370XXE_profile_pattern_5.n_88-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR224QDY_ChIP_ZNF121_HEK293_ENCSR370XXE_profile_pattern_6.n_24-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR799URB_ChIP_ZNF121_K562_ENCSR391MTA_profile_pattern_0.n_17962-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR799URB_ChIP_ZNF121_K562_ENCSR391MTA_profile_pattern_10.n_37-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR799URB_ChIP_ZNF121_K562_ENCSR391MTA_profile_pattern_11.n_34-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR799URB_ChIP_ZNF121_K562_ENCSR391MTA_profile_pattern_1.n_695-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR799URB_ChIP_ZNF121_K562_ENCSR391MTA_profile_pattern_2.n_684-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR799URB_ChIP_ZNF121_K562_ENCSR391MTA_profile_pattern_3.n_447-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR799URB_ChIP_ZNF121_K562_ENCSR391MTA_profile_pattern_4.n_189-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR799URB_ChIP_ZNF121_K562_ENCSR391MTA_profile_pattern_5.n_136-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR799URB_ChIP_ZNF121_K562_ENCSR391MTA_profile_pattern_6.n_116-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR799URB_ChIP_ZNF121_K562_ENCSR391MTA_profile_pattern_7.n_96-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR799URB_ChIP_ZNF121_K562_ENCSR391MTA_profile_pattern_8.n_79-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR799URB_ChIP_ZNF121_K562_ENCSR391MTA_profile_pattern_9.n_48-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_profile_pattern_0.n_16254-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_profile_pattern_10.n_149-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_profile_pattern_11.n_138-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_profile_pattern_12.n_74-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_profile_pattern_13.n_72-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_profile_pattern_14.n_52-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_profile_pattern_15.n_30-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_profile_pattern_1.n_960-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_profile_pattern_2.n_810-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_profile_pattern_3.n_612-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_profile_pattern_4.n_347-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF121-201/pos_patterns.ENCSR945QEW_ChIP_ZNF121_HepG2_ENCSR279WZH_profile_pattern_5.n_254-vs-ZNF121-201.alignment profile-znf_b1h_alignment/ZNF121-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR041YBR_ChIP_ZNF12_K562_ENCSR035AXW_profile_pattern_5.n_210-vs-ZNF12-201.alignment profile-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR041YBR_ChIP_ZNF12_K562_ENCSR035AXW_profile_pattern_6.n_187-vs-ZNF12-201.alignment profile-znf_b1h_alignment/ZNF12-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR041YBR_ChIP_ZNF12_K562_ENCSR035AXW_profile_pattern_8.n_115-vs-ZNF12-201.alignment profile-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR041YBR_ChIP_ZNF12_K562_ENCSR035AXW_profile_pattern_9.n_96-vs-ZNF12-201.alignment profile-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR711KBM_ChIP_ZNF12_HepG2_ENCSR835UBF_profile_pattern_0.n_4035-vs-ZNF12-201.alignment profile-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR711KBM_ChIP_ZNF12_HepG2_ENCSR835UBF_profile_pattern_10.n_416-vs-ZNF12-201.alignment profile-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR711KBM_ChIP_ZNF12_HepG2_ENCSR835UBF_profile_pattern_11.n_400-vs-ZNF12-201.alignment profile-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR711KBM_ChIP_ZNF12_HepG2_ENCSR835UBF_profile_pattern_12.n_377-vs-ZNF12-201.alignment profile-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR711KBM_ChIP_ZNF12_HepG2_ENCSR835UBF_profile_pattern_13.n_377-vs-ZNF12-201.alignment profile-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR711KBM_ChIP_ZNF12_HepG2_ENCSR835UBF_profile_pattern_14.n_351-vs-ZNF12-201.alignment profile-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR711KBM_ChIP_ZNF12_HepG2_ENCSR835UBF_profile_pattern_15.n_312-vs-ZNF12-201.alignment profile-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR711KBM_ChIP_ZNF12_HepG2_ENCSR835UBF_profile_pattern_16.n_260-vs-ZNF12-201.alignment profile-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR711KBM_ChIP_ZNF12_HepG2_ENCSR835UBF_profile_pattern_17.n_143-vs-ZNF12-201.alignment profile-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR711KBM_ChIP_ZNF12_HepG2_ENCSR835UBF_profile_pattern_18.n_132-vs-ZNF12-201.alignment profile-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR711KBM_ChIP_ZNF12_HepG2_ENCSR835UBF_profile_pattern_19.n_126-vs-ZNF12-201.alignment profile-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR711KBM_ChIP_ZNF12_HepG2_ENCSR835UBF_profile_pattern_1.n_2870-vs-ZNF12-201.alignment profile-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR711KBM_ChIP_ZNF12_HepG2_ENCSR835UBF_profile_pattern_20.n_122-vs-ZNF12-201.alignment profile-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR711KBM_ChIP_ZNF12_HepG2_ENCSR835UBF_profile_pattern_21.n_106-vs-ZNF12-201.alignment profile-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR711KBM_ChIP_ZNF12_HepG2_ENCSR835UBF_profile_pattern_22.n_103-vs-ZNF12-201.alignment profile-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR711KBM_ChIP_ZNF12_HepG2_ENCSR835UBF_profile_pattern_23.n_90-vs-ZNF12-201.alignment profile-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR711KBM_ChIP_ZNF12_HepG2_ENCSR835UBF_profile_pattern_24.n_52-vs-ZNF12-201.alignment profile-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR711KBM_ChIP_ZNF12_HepG2_ENCSR835UBF_profile_pattern_25.n_38-vs-ZNF12-201.alignment profile-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR711KBM_ChIP_ZNF12_HepG2_ENCSR835UBF_profile_pattern_26.n_26-vs-ZNF12-201.alignment profile-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR711KBM_ChIP_ZNF12_HepG2_ENCSR835UBF_profile_pattern_27.n_25-vs-ZNF12-201.alignment profile-znf_b1h_alignment/ZNF12-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR711KBM_ChIP_ZNF12_HepG2_ENCSR835UBF_profile_pattern_28.n_23-vs-ZNF12-201.alignment profile-znf_b1h_alignment/ZNF12-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF12-201/pos_patterns.ENCSR711KBM_ChIP_ZNF12_HepG2_ENCSR835UBF_profile_pattern_3.n_1878-vs-ZNF12-201.alignment profile-znf_b1h_alignment/ZNF12-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF124-201/pos_patterns.ENCSR124YFA_ChIP_ZNF124_K562_ENCSR532VCB_profile_pattern_9.n_43-vs-ZNF124-201.alignment profile-znf_b1h_alignment/ZNF124-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF124-201/pos_patterns.ENCSR357YPP_ChIP_ZNF124_HepG2_ENCSR242SMM_profile_pattern_0.n_2370-vs-ZNF124-201.alignment profile-znf_b1h_alignment/ZNF124-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF124-201/pos_patterns.ENCSR357YPP_ChIP_ZNF124_HepG2_ENCSR242SMM_profile_pattern_10.n_187-vs-ZNF124-201.alignment profile-znf_b1h_alignment/ZNF124-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF124-206/pos_patterns.ENCSR124YFA_ChIP_ZNF124_K562_ENCSR532VCB_profile_pattern_5.n_49-vs-ZNF124-206.alignment profile-znf_b1h_alignment/ZNF124-206/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF124-206/pos_patterns.ENCSR124YFA_ChIP_ZNF124_K562_ENCSR532VCB_profile_pattern_9.n_43-vs-ZNF124-206.alignment profile-znf_b1h_alignment/ZNF124-206/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF140-202/neg_patterns.ENCSR464KFG_ChIP_ZNF140_HEK293_ENCSR374NAK_profile_pattern_1.n_93-vs-ZNF140-202.alignment profile-znf_b1h_alignment/ZNF140-202/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF143-201/neg_patterns.ENCSR063FUV_ChIP_ZNF143_WTC11_ENCSR643MAZ_profile_pattern_14.n_33-vs-ZNF143-201.alignment profile-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF143-201/neg_patterns.ENCSR063FUV_ChIP_ZNF143_WTC11_ENCSR643MAZ_profile_pattern_15.n_20-vs-ZNF143-201.alignment profile-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF143-201/neg_patterns.ENCSR063FUV_ChIP_ZNF143_WTC11_ENCSR643MAZ_profile_pattern_1.n_307-vs-ZNF143-201.alignment profile-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF143-201/neg_patterns.ENCSR063FUV_ChIP_ZNF143_WTC11_ENCSR643MAZ_profile_pattern_2.n_155-vs-ZNF143-201.alignment profile-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF143-201/neg_patterns.ENCSR063FUV_ChIP_ZNF143_WTC11_ENCSR643MAZ_profile_pattern_3.n_119-vs-ZNF143-201.alignment profile-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF143-201/neg_patterns.ENCSR063FUV_ChIP_ZNF143_WTC11_ENCSR643MAZ_profile_pattern_4.n_112-vs-ZNF143-201.alignment profile-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF143-201/neg_patterns.ENCSR063FUV_ChIP_ZNF143_WTC11_ENCSR643MAZ_profile_pattern_5.n_110-vs-ZNF143-201.alignment profile-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF143-201/neg_patterns.ENCSR063FUV_ChIP_ZNF143_WTC11_ENCSR643MAZ_profile_pattern_6.n_108-vs-ZNF143-201.alignment profile-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF143-201/neg_patterns.ENCSR063FUV_ChIP_ZNF143_WTC11_ENCSR643MAZ_profile_pattern_7.n_80-vs-ZNF143-201.alignment profile-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF143-201/neg_patterns.ENCSR063FUV_ChIP_ZNF143_WTC11_ENCSR643MAZ_profile_pattern_8.n_77-vs-ZNF143-201.alignment profile-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF143-201/neg_patterns.ENCSR063FUV_ChIP_ZNF143_WTC11_ENCSR643MAZ_profile_pattern_9.n_60-vs-ZNF143-201.alignment profile-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF143-201/neg_patterns.ENCSR080UEM_ChIP_ZNF143_HepG2_ENCSR622AVH_profile_pattern_0.n_430-vs-ZNF143-201.alignment profile-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF143-201/neg_patterns.ENCSR080UEM_ChIP_ZNF143_HepG2_ENCSR622AVH_profile_pattern_1.n_403-vs-ZNF143-201.alignment profile-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF143-201/neg_patterns.ENCSR080UEM_ChIP_ZNF143_HepG2_ENCSR622AVH_profile_pattern_2.n_223-vs-ZNF143-201.alignment profile-znf_b1h_alignment/ZNF143-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF143-201/neg_patterns.ENCSR080UEM_ChIP_ZNF143_HepG2_ENCSR622AVH_profile_pattern_5.n_75-vs-ZNF143-201.alignment profile-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF143-201/neg_patterns.ENCSR080UEM_ChIP_ZNF143_HepG2_ENCSR622AVH_profile_pattern_6.n_49-vs-ZNF143-201.alignment profile-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF143-201/neg_patterns.ENCSR427WZJ_ChIP_ZNF143_K562_ENCSR694XKS_profile_pattern_0.n_104-vs-ZNF143-201.alignment profile-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF143-201/neg_patterns.ENCSR427WZJ_ChIP_ZNF143_K562_ENCSR694XKS_profile_pattern_1.n_72-vs-ZNF143-201.alignment profile-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF143-201/neg_patterns.ENCSR427WZJ_ChIP_ZNF143_K562_ENCSR694XKS_profile_pattern_2.n_69-vs-ZNF143-201.alignment profile-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF143-201/neg_patterns.ENCSR427WZJ_ChIP_ZNF143_K562_ENCSR694XKS_profile_pattern_3.n_59-vs-ZNF143-201.alignment profile-znf_b1h_alignment/ZNF143-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR936XTK_ChIP_ZNF143_GM12878_ENCSR226UUQ_profile_pattern_4.n_922-vs-ZNF143-201.alignment profile-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR936XTK_ChIP_ZNF143_GM12878_ENCSR226UUQ_profile_pattern_5.n_766-vs-ZNF143-201.alignment profile-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR936XTK_ChIP_ZNF143_GM12878_ENCSR226UUQ_profile_pattern_6.n_760-vs-ZNF143-201.alignment profile-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR936XTK_ChIP_ZNF143_GM12878_ENCSR226UUQ_profile_pattern_7.n_694-vs-ZNF143-201.alignment profile-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR936XTK_ChIP_ZNF143_GM12878_ENCSR226UUQ_profile_pattern_8.n_545-vs-ZNF143-201.alignment profile-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF143-201/pos_patterns.ENCSR936XTK_ChIP_ZNF143_GM12878_ENCSR226UUQ_profile_pattern_9.n_519-vs-ZNF143-201.alignment profile-znf_b1h_alignment/ZNF143-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/Hughes_GR_models_ZNF146_profile-pos.pattern_0.n_6705-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/Hughes_GR_models_ZNF146_profile-pos.pattern_2.n_31-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR689YFA_ChIP_ZNF146_HEK293_ENCSR026AKK_profile_pattern_0.n_179-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR689YFA_ChIP_ZNF146_HEK293_ENCSR026AKK_profile_pattern_1.n_95-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR689YFA_ChIP_ZNF146_HEK293_ENCSR026AKK_profile_pattern_3.n_45-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR689YFA_ChIP_ZNF146_HEK293_ENCSR026AKK_profile_pattern_4.n_44-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR689YFA_ChIP_ZNF146_HEK293_ENCSR026AKK_profile_pattern_5.n_38-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR689YFA_ChIP_ZNF146_HEK293_ENCSR026AKK_profile_pattern_6.n_31-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR689YFA_ChIP_ZNF146_HEK293_ENCSR026AKK_profile_pattern_7.n_30-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR713IFY_ChIP_ZNF146_K562_ENCSR132QOJ_profile_pattern_1.n_652-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR713IFY_ChIP_ZNF146_K562_ENCSR132QOJ_profile_pattern_2.n_179-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR713IFY_ChIP_ZNF146_K562_ENCSR132QOJ_profile_pattern_3.n_119-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR713IFY_ChIP_ZNF146_K562_ENCSR132QOJ_profile_pattern_4.n_65-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR713IFY_ChIP_ZNF146_K562_ENCSR132QOJ_profile_pattern_5.n_49-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR713IFY_ChIP_ZNF146_K562_ENCSR132QOJ_profile_pattern_6.n_23-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR713IFY_ChIP_ZNF146_K562_ENCSR132QOJ_profile_pattern_7.n_22-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR713IFY_ChIP_ZNF146_K562_ENCSR132QOJ_profile_pattern_8.n_20-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_0.n_6615-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_10.n_259-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_11.n_244-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_12.n_237-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_13.n_194-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_14.n_188-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_15.n_158-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_16.n_158-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_17.n_151-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_18.n_139-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_19.n_114-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_1.n_1787-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_20.n_85-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_21.n_70-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_22.n_70-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_23.n_68-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_24.n_63-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_25.n_61-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_26.n_55-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_27.n_46-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_28.n_44-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_29.n_37-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_2.n_1379-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_30.n_37-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_31.n_34-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_32.n_32-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_33.n_27-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_34.n_25-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_35.n_22-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_36.n_20-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_37.n_20-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/neg_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_38.n_20-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/pos_patterns.ENCSR713IFY_ChIP_ZNF146_K562_ENCSR132QOJ_profile_pattern_22.n_69-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/pos_patterns.ENCSR713IFY_ChIP_ZNF146_K562_ENCSR132QOJ_profile_pattern_23.n_60-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/pos_patterns.ENCSR713IFY_ChIP_ZNF146_K562_ENCSR132QOJ_profile_pattern_24.n_59-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/pos_patterns.ENCSR713IFY_ChIP_ZNF146_K562_ENCSR132QOJ_profile_pattern_25.n_51-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/pos_patterns.ENCSR713IFY_ChIP_ZNF146_K562_ENCSR132QOJ_profile_pattern_26.n_36-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/pos_patterns.ENCSR713IFY_ChIP_ZNF146_K562_ENCSR132QOJ_profile_pattern_27.n_35-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/pos_patterns.ENCSR713IFY_ChIP_ZNF146_K562_ENCSR132QOJ_profile_pattern_2.n_571-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/pos_patterns.ENCSR713IFY_ChIP_ZNF146_K562_ENCSR132QOJ_profile_pattern_3.n_459-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/pos_patterns.ENCSR713IFY_ChIP_ZNF146_K562_ENCSR132QOJ_profile_pattern_4.n_426-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/pos_patterns.ENCSR713IFY_ChIP_ZNF146_K562_ENCSR132QOJ_profile_pattern_5.n_357-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/pos_patterns.ENCSR713IFY_ChIP_ZNF146_K562_ENCSR132QOJ_profile_pattern_6.n_347-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/pos_patterns.ENCSR713IFY_ChIP_ZNF146_K562_ENCSR132QOJ_profile_pattern_7.n_327-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/pos_patterns.ENCSR713IFY_ChIP_ZNF146_K562_ENCSR132QOJ_profile_pattern_8.n_321-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/pos_patterns.ENCSR713IFY_ChIP_ZNF146_K562_ENCSR132QOJ_profile_pattern_9.n_285-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/pos_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_0.n_15515-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/pos_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_10.n_48-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/pos_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_11.n_47-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/pos_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_12.n_45-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/pos_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_13.n_40-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/pos_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_14.n_37-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/pos_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_15.n_31-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/pos_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_1.n_567-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/pos_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_2.n_391-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/pos_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_3.n_268-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/pos_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_4.n_235-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/pos_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_5.n_114-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/pos_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_6.n_109-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/pos_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_7.n_72-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/pos_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_8.n_67-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF146-201/pos_patterns.ENCSR957LTN_ChIP_ZNF146_HepG2_ENCSR960XYX_profile_pattern_9.n_51-vs-ZNF146-201.alignment profile-znf_b1h_alignment/ZNF146-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF148-201/neg_patterns.ENCSR018MSO_ChIP_ZNF148_K562_ENCSR954JSO_profile_pattern_1.n_222-vs-ZNF148-201.alignment profile-znf_b1h_alignment/ZNF148-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF157-201/neg_patterns.ENCSR564YYW_ChIP_ZNF157_HEK293_ENCSR213DSH_profile_pattern_10.n_32-vs-ZNF157-201.alignment profile-znf_b1h_alignment/ZNF157-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF157-201/neg_patterns.ENCSR564YYW_ChIP_ZNF157_HEK293_ENCSR213DSH_profile_pattern_11.n_32-vs-ZNF157-201.alignment profile-znf_b1h_alignment/ZNF157-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF157-201/neg_patterns.ENCSR564YYW_ChIP_ZNF157_HEK293_ENCSR213DSH_profile_pattern_12.n_31-vs-ZNF157-201.alignment profile-znf_b1h_alignment/ZNF157-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF157-201/neg_patterns.ENCSR564YYW_ChIP_ZNF157_HEK293_ENCSR213DSH_profile_pattern_13.n_26-vs-ZNF157-201.alignment profile-znf_b1h_alignment/ZNF157-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF157-201/neg_patterns.ENCSR564YYW_ChIP_ZNF157_HEK293_ENCSR213DSH_profile_pattern_14.n_24-vs-ZNF157-201.alignment profile-znf_b1h_alignment/ZNF157-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF157-201/neg_patterns.ENCSR564YYW_ChIP_ZNF157_HEK293_ENCSR213DSH_profile_pattern_15.n_24-vs-ZNF157-201.alignment profile-znf_b1h_alignment/ZNF157-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF157-201/neg_patterns.ENCSR564YYW_ChIP_ZNF157_HEK293_ENCSR213DSH_profile_pattern_16.n_21-vs-ZNF157-201.alignment profile-znf_b1h_alignment/ZNF157-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF157-201/neg_patterns.ENCSR564YYW_ChIP_ZNF157_HEK293_ENCSR213DSH_profile_pattern_1.n_196-vs-ZNF157-201.alignment profile-znf_b1h_alignment/ZNF157-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF157-201/neg_patterns.ENCSR564YYW_ChIP_ZNF157_HEK293_ENCSR213DSH_profile_pattern_2.n_87-vs-ZNF157-201.alignment profile-znf_b1h_alignment/ZNF157-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF157-201/neg_patterns.ENCSR564YYW_ChIP_ZNF157_HEK293_ENCSR213DSH_profile_pattern_3.n_66-vs-ZNF157-201.alignment profile-znf_b1h_alignment/ZNF157-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF157-201/neg_patterns.ENCSR564YYW_ChIP_ZNF157_HEK293_ENCSR213DSH_profile_pattern_4.n_59-vs-ZNF157-201.alignment profile-znf_b1h_alignment/ZNF157-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF157-201/neg_patterns.ENCSR564YYW_ChIP_ZNF157_HEK293_ENCSR213DSH_profile_pattern_5.n_48-vs-ZNF157-201.alignment profile-znf_b1h_alignment/ZNF157-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF157-201/neg_patterns.ENCSR564YYW_ChIP_ZNF157_HEK293_ENCSR213DSH_profile_pattern_6.n_43-vs-ZNF157-201.alignment profile-znf_b1h_alignment/ZNF157-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF157-201/neg_patterns.ENCSR564YYW_ChIP_ZNF157_HEK293_ENCSR213DSH_profile_pattern_7.n_37-vs-ZNF157-201.alignment profile-znf_b1h_alignment/ZNF157-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF157-201/neg_patterns.ENCSR564YYW_ChIP_ZNF157_HEK293_ENCSR213DSH_profile_pattern_8.n_36-vs-ZNF157-201.alignment profile-znf_b1h_alignment/ZNF157-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF157-201/neg_patterns.ENCSR564YYW_ChIP_ZNF157_HEK293_ENCSR213DSH_profile_pattern_9.n_33-vs-ZNF157-201.alignment profile-znf_b1h_alignment/ZNF157-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF157-201/pos_patterns.ENCSR564YYW_ChIP_ZNF157_HEK293_ENCSR213DSH_profile_pattern_0.n_1109-vs-ZNF157-201.alignment profile-znf_b1h_alignment/ZNF157-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF157-201/pos_patterns.ENCSR564YYW_ChIP_ZNF157_HEK293_ENCSR213DSH_profile_pattern_10.n_23-vs-ZNF157-201.alignment profile-znf_b1h_alignment/ZNF157-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF157-201/pos_patterns.ENCSR564YYW_ChIP_ZNF157_HEK293_ENCSR213DSH_profile_pattern_11.n_21-vs-ZNF157-201.alignment profile-znf_b1h_alignment/ZNF157-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF157-201/pos_patterns.ENCSR564YYW_ChIP_ZNF157_HEK293_ENCSR213DSH_profile_pattern_1.n_912-vs-ZNF157-201.alignment profile-znf_b1h_alignment/ZNF157-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF157-201/pos_patterns.ENCSR564YYW_ChIP_ZNF157_HEK293_ENCSR213DSH_profile_pattern_2.n_350-vs-ZNF157-201.alignment profile-znf_b1h_alignment/ZNF157-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF157-201/pos_patterns.ENCSR564YYW_ChIP_ZNF157_HEK293_ENCSR213DSH_profile_pattern_3.n_320-vs-ZNF157-201.alignment profile-znf_b1h_alignment/ZNF157-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF157-201/pos_patterns.ENCSR564YYW_ChIP_ZNF157_HEK293_ENCSR213DSH_profile_pattern_4.n_213-vs-ZNF157-201.alignment profile-znf_b1h_alignment/ZNF157-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF157-201/pos_patterns.ENCSR564YYW_ChIP_ZNF157_HEK293_ENCSR213DSH_profile_pattern_5.n_158-vs-ZNF157-201.alignment profile-znf_b1h_alignment/ZNF157-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF157-201/pos_patterns.ENCSR564YYW_ChIP_ZNF157_HEK293_ENCSR213DSH_profile_pattern_6.n_123-vs-ZNF157-201.alignment profile-znf_b1h_alignment/ZNF157-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF157-201/pos_patterns.ENCSR564YYW_ChIP_ZNF157_HEK293_ENCSR213DSH_profile_pattern_7.n_119-vs-ZNF157-201.alignment profile-znf_b1h_alignment/ZNF157-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF157-201/pos_patterns.ENCSR564YYW_ChIP_ZNF157_HEK293_ENCSR213DSH_profile_pattern_8.n_33-vs-ZNF157-201.alignment profile-znf_b1h_alignment/ZNF157-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF157-201/pos_patterns.ENCSR564YYW_ChIP_ZNF157_HEK293_ENCSR213DSH_profile_pattern_9.n_33-vs-ZNF157-201.alignment profile-znf_b1h_alignment/ZNF157-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF160-202/pos_patterns.ENCSR917SSX_ChIP_ZNF160_HepG2_ENCSR440MKI_profile_pattern_0.n_770-vs-ZNF160-202.alignment profile-znf_b1h_alignment/ZNF160-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF160-202/pos_patterns.ENCSR917SSX_ChIP_ZNF160_HepG2_ENCSR440MKI_profile_pattern_10.n_74-vs-ZNF160-202.alignment profile-znf_b1h_alignment/ZNF160-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF160-202/pos_patterns.ENCSR917SSX_ChIP_ZNF160_HepG2_ENCSR440MKI_profile_pattern_11.n_56-vs-ZNF160-202.alignment profile-znf_b1h_alignment/ZNF160-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF160-202/pos_patterns.ENCSR917SSX_ChIP_ZNF160_HepG2_ENCSR440MKI_profile_pattern_12.n_56-vs-ZNF160-202.alignment profile-znf_b1h_alignment/ZNF160-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF160-202/pos_patterns.ENCSR917SSX_ChIP_ZNF160_HepG2_ENCSR440MKI_profile_pattern_13.n_52-vs-ZNF160-202.alignment profile-znf_b1h_alignment/ZNF160-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF160-202/pos_patterns.ENCSR917SSX_ChIP_ZNF160_HepG2_ENCSR440MKI_profile_pattern_14.n_46-vs-ZNF160-202.alignment profile-znf_b1h_alignment/ZNF160-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF160-202/pos_patterns.ENCSR917SSX_ChIP_ZNF160_HepG2_ENCSR440MKI_profile_pattern_15.n_45-vs-ZNF160-202.alignment profile-znf_b1h_alignment/ZNF160-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF160-202/pos_patterns.ENCSR917SSX_ChIP_ZNF160_HepG2_ENCSR440MKI_profile_pattern_16.n_39-vs-ZNF160-202.alignment profile-znf_b1h_alignment/ZNF160-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF160-202/pos_patterns.ENCSR917SSX_ChIP_ZNF160_HepG2_ENCSR440MKI_profile_pattern_17.n_38-vs-ZNF160-202.alignment profile-znf_b1h_alignment/ZNF160-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF160-202/pos_patterns.ENCSR917SSX_ChIP_ZNF160_HepG2_ENCSR440MKI_profile_pattern_18.n_30-vs-ZNF160-202.alignment profile-znf_b1h_alignment/ZNF160-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF160-202/pos_patterns.ENCSR917SSX_ChIP_ZNF160_HepG2_ENCSR440MKI_profile_pattern_19.n_21-vs-ZNF160-202.alignment profile-znf_b1h_alignment/ZNF160-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF160-202/pos_patterns.ENCSR917SSX_ChIP_ZNF160_HepG2_ENCSR440MKI_profile_pattern_1.n_263-vs-ZNF160-202.alignment profile-znf_b1h_alignment/ZNF160-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF160-202/pos_patterns.ENCSR917SSX_ChIP_ZNF160_HepG2_ENCSR440MKI_profile_pattern_20.n_21-vs-ZNF160-202.alignment profile-znf_b1h_alignment/ZNF160-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF160-202/pos_patterns.ENCSR917SSX_ChIP_ZNF160_HepG2_ENCSR440MKI_profile_pattern_2.n_208-vs-ZNF160-202.alignment profile-znf_b1h_alignment/ZNF160-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF160-202/pos_patterns.ENCSR917SSX_ChIP_ZNF160_HepG2_ENCSR440MKI_profile_pattern_3.n_191-vs-ZNF160-202.alignment profile-znf_b1h_alignment/ZNF160-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF160-202/pos_patterns.ENCSR917SSX_ChIP_ZNF160_HepG2_ENCSR440MKI_profile_pattern_4.n_166-vs-ZNF160-202.alignment profile-znf_b1h_alignment/ZNF160-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF160-202/pos_patterns.ENCSR917SSX_ChIP_ZNF160_HepG2_ENCSR440MKI_profile_pattern_5.n_133-vs-ZNF160-202.alignment profile-znf_b1h_alignment/ZNF160-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF160-202/pos_patterns.ENCSR917SSX_ChIP_ZNF160_HepG2_ENCSR440MKI_profile_pattern_6.n_96-vs-ZNF160-202.alignment profile-znf_b1h_alignment/ZNF160-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF160-202/pos_patterns.ENCSR917SSX_ChIP_ZNF160_HepG2_ENCSR440MKI_profile_pattern_7.n_88-vs-ZNF160-202.alignment profile-znf_b1h_alignment/ZNF160-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF160-202/pos_patterns.ENCSR917SSX_ChIP_ZNF160_HepG2_ENCSR440MKI_profile_pattern_8.n_86-vs-ZNF160-202.alignment profile-znf_b1h_alignment/ZNF160-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF160-202/pos_patterns.ENCSR917SSX_ChIP_ZNF160_HepG2_ENCSR440MKI_profile_pattern_9.n_75-vs-ZNF160-202.alignment profile-znf_b1h_alignment/ZNF160-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF16-201/Hughes_GR_models_ZNF16_profile-pos.pattern_0.n_109-vs-ZNF16-201.alignment profile-znf_b1h_alignment/ZNF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF16-201/Hughes_GR_models_ZNF16_profile-pos.pattern_1.n_44-vs-ZNF16-201.alignment profile-znf_b1h_alignment/ZNF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF16-201/Hughes_GR_models_ZNF16_profile-pos.pattern_2.n_22-vs-ZNF16-201.alignment profile-znf_b1h_alignment/ZNF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF16-201/Hughes_NB_models_ZNF16_profile-pos.pattern_0.n_49-vs-ZNF16-201.alignment profile-znf_b1h_alignment/ZNF16-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF16-201/Hughes_NB_models_ZNF16_profile-pos.pattern_2.n_22-vs-ZNF16-201.alignment profile-znf_b1h_alignment/ZNF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF16-201/Hughes_NB_models_ZNF16_profile-pos.pattern_3.n_20-vs-ZNF16-201.alignment profile-znf_b1h_alignment/ZNF16-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF16-201/neg_patterns.ENCSR093HXE_ChIP_ZNF16_HEK293_ENCSR101YMY_profile_pattern_0.n_86-vs-ZNF16-201.alignment profile-znf_b1h_alignment/ZNF16-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF175-201/Hughes_GR_models_ZNF175_profile-pos.pattern_0.n_32-vs-ZNF175-201.alignment profile-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF175-201/Hughes_GR_models_ZNF175_profile-pos.pattern_1.n_24-vs-ZNF175-201.alignment profile-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF175-201/Hughes_GR_models_ZNF175_profile-pos.pattern_2.n_20-vs-ZNF175-201.alignment profile-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF175-201/neg_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_profile_pattern_0.n_255-vs-ZNF175-201.alignment profile-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF175-201/neg_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_profile_pattern_1.n_56-vs-ZNF175-201.alignment profile-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF175-201/neg_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_profile_pattern_2.n_43-vs-ZNF175-201.alignment profile-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF175-201/neg_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_profile_pattern_3.n_42-vs-ZNF175-201.alignment profile-znf_b1h_alignment/ZNF175-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_profile_pattern_14.n_185-vs-ZNF175-201.alignment profile-znf_b1h_alignment/ZNF175-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_profile_pattern_16.n_154-vs-ZNF175-201.alignment profile-znf_b1h_alignment/ZNF175-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_profile_pattern_18.n_115-vs-ZNF175-201.alignment profile-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_profile_pattern_19.n_77-vs-ZNF175-201.alignment profile-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_profile_pattern_1.n_1841-vs-ZNF175-201.alignment profile-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_profile_pattern_20.n_74-vs-ZNF175-201.alignment profile-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_profile_pattern_21.n_64-vs-ZNF175-201.alignment profile-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_profile_pattern_22.n_57-vs-ZNF175-201.alignment profile-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_profile_pattern_23.n_55-vs-ZNF175-201.alignment profile-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_profile_pattern_24.n_54-vs-ZNF175-201.alignment profile-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_profile_pattern_25.n_53-vs-ZNF175-201.alignment profile-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_profile_pattern_26.n_45-vs-ZNF175-201.alignment profile-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_profile_pattern_27.n_42-vs-ZNF175-201.alignment profile-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_profile_pattern_28.n_42-vs-ZNF175-201.alignment profile-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_profile_pattern_29.n_31-vs-ZNF175-201.alignment profile-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_profile_pattern_2.n_1774-vs-ZNF175-201.alignment profile-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_profile_pattern_30.n_24-vs-ZNF175-201.alignment profile-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_profile_pattern_31.n_23-vs-ZNF175-201.alignment profile-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_profile_pattern_32.n_22-vs-ZNF175-201.alignment profile-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_profile_pattern_3.n_1473-vs-ZNF175-201.alignment profile-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_profile_pattern_4.n_915-vs-ZNF175-201.alignment profile-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_profile_pattern_5.n_824-vs-ZNF175-201.alignment profile-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_profile_pattern_6.n_784-vs-ZNF175-201.alignment profile-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_profile_pattern_7.n_717-vs-ZNF175-201.alignment profile-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_profile_pattern_8.n_607-vs-ZNF175-201.alignment profile-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR011PEI_ChIP_ZNF175_K562_ENCSR983EKD_profile_pattern_9.n_366-vs-ZNF175-201.alignment profile-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR103GAK_ChIP_ZNF175_HEK293_ENCSR957YTI_profile_pattern_0.n_135-vs-ZNF175-201.alignment profile-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR103GAK_ChIP_ZNF175_HEK293_ENCSR957YTI_profile_pattern_1.n_27-vs-ZNF175-201.alignment profile-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF175-201/pos_patterns.ENCSR103GAK_ChIP_ZNF175_HEK293_ENCSR957YTI_profile_pattern_2.n_25-vs-ZNF175-201.alignment profile-znf_b1h_alignment/ZNF175-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF180-201/ChipExo_models_ZNF180_profile-pos.pattern_0.n_216-vs-ZNF180-201.alignment profile-znf_b1h_alignment/ZNF180-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF180-201/ChipExo_models_ZNF180_profile-pos.pattern_1.n_103-vs-ZNF180-201.alignment profile-znf_b1h_alignment/ZNF180-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF180-201/ChipExo_models_ZNF180_profile-pos.pattern_2.n_83-vs-ZNF180-201.alignment profile-znf_b1h_alignment/ZNF180-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF180-201/ChipExo_models_ZNF180_profile-pos.pattern_3.n_77-vs-ZNF180-201.alignment profile-znf_b1h_alignment/ZNF180-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF180-201/ChipExo_models_ZNF180_profile-pos.pattern_4.n_45-vs-ZNF180-201.alignment profile-znf_b1h_alignment/ZNF180-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF180-201/ChipExo_models_ZNF180_profile-pos.pattern_5.n_44-vs-ZNF180-201.alignment profile-znf_b1h_alignment/ZNF180-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF180-201/ChipExo_models_ZNF180_profile-pos.pattern_6.n_41-vs-ZNF180-201.alignment profile-znf_b1h_alignment/ZNF180-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF180-201/ChipExo_models_ZNF180_profile-pos.pattern_7.n_33-vs-ZNF180-201.alignment profile-znf_b1h_alignment/ZNF180-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF180-201/ChipExo_models_ZNF180_profile-pos.pattern_8.n_30-vs-ZNF180-201.alignment profile-znf_b1h_alignment/ZNF180-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF180-201/pos_patterns.ENCSR298DSB_ChIP_ZNF180_HepG2_ENCSR020JJT_profile_pattern_0.n_180-vs-ZNF180-201.alignment profile-znf_b1h_alignment/ZNF180-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF18-201/neg_patterns.ENCSR977HTH_ChIP_ZNF18_HEK293_ENCSR114LPS_profile_pattern_6.n_23-vs-ZNF18-201.alignment profile-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR553ZJQ_ChIP_ZNF18_HepG2_ENCSR672NTT_profile_pattern_0.n_2342-vs-ZNF18-201.alignment profile-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR553ZJQ_ChIP_ZNF18_HepG2_ENCSR672NTT_profile_pattern_10.n_250-vs-ZNF18-201.alignment profile-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR553ZJQ_ChIP_ZNF18_HepG2_ENCSR672NTT_profile_pattern_11.n_173-vs-ZNF18-201.alignment profile-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR553ZJQ_ChIP_ZNF18_HepG2_ENCSR672NTT_profile_pattern_12.n_167-vs-ZNF18-201.alignment profile-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR553ZJQ_ChIP_ZNF18_HepG2_ENCSR672NTT_profile_pattern_13.n_161-vs-ZNF18-201.alignment profile-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR553ZJQ_ChIP_ZNF18_HepG2_ENCSR672NTT_profile_pattern_14.n_158-vs-ZNF18-201.alignment profile-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR553ZJQ_ChIP_ZNF18_HepG2_ENCSR672NTT_profile_pattern_15.n_91-vs-ZNF18-201.alignment profile-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR553ZJQ_ChIP_ZNF18_HepG2_ENCSR672NTT_profile_pattern_16.n_86-vs-ZNF18-201.alignment profile-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR553ZJQ_ChIP_ZNF18_HepG2_ENCSR672NTT_profile_pattern_17.n_77-vs-ZNF18-201.alignment profile-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR553ZJQ_ChIP_ZNF18_HepG2_ENCSR672NTT_profile_pattern_18.n_64-vs-ZNF18-201.alignment profile-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR553ZJQ_ChIP_ZNF18_HepG2_ENCSR672NTT_profile_pattern_19.n_58-vs-ZNF18-201.alignment profile-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR553ZJQ_ChIP_ZNF18_HepG2_ENCSR672NTT_profile_pattern_1.n_1292-vs-ZNF18-201.alignment profile-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR553ZJQ_ChIP_ZNF18_HepG2_ENCSR672NTT_profile_pattern_20.n_33-vs-ZNF18-201.alignment profile-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR553ZJQ_ChIP_ZNF18_HepG2_ENCSR672NTT_profile_pattern_21.n_30-vs-ZNF18-201.alignment profile-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR553ZJQ_ChIP_ZNF18_HepG2_ENCSR672NTT_profile_pattern_22.n_29-vs-ZNF18-201.alignment profile-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR553ZJQ_ChIP_ZNF18_HepG2_ENCSR672NTT_profile_pattern_23.n_28-vs-ZNF18-201.alignment profile-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR553ZJQ_ChIP_ZNF18_HepG2_ENCSR672NTT_profile_pattern_24.n_23-vs-ZNF18-201.alignment profile-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR553ZJQ_ChIP_ZNF18_HepG2_ENCSR672NTT_profile_pattern_2.n_829-vs-ZNF18-201.alignment profile-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR553ZJQ_ChIP_ZNF18_HepG2_ENCSR672NTT_profile_pattern_3.n_646-vs-ZNF18-201.alignment profile-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR553ZJQ_ChIP_ZNF18_HepG2_ENCSR672NTT_profile_pattern_4.n_623-vs-ZNF18-201.alignment profile-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR553ZJQ_ChIP_ZNF18_HepG2_ENCSR672NTT_profile_pattern_5.n_422-vs-ZNF18-201.alignment profile-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR553ZJQ_ChIP_ZNF18_HepG2_ENCSR672NTT_profile_pattern_6.n_402-vs-ZNF18-201.alignment profile-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR553ZJQ_ChIP_ZNF18_HepG2_ENCSR672NTT_profile_pattern_7.n_384-vs-ZNF18-201.alignment profile-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR553ZJQ_ChIP_ZNF18_HepG2_ENCSR672NTT_profile_pattern_8.n_310-vs-ZNF18-201.alignment profile-znf_b1h_alignment/ZNF18-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR553ZJQ_ChIP_ZNF18_HepG2_ENCSR672NTT_profile_pattern_9.n_263-vs-ZNF18-201.alignment profile-znf_b1h_alignment/ZNF18-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF18-201/pos_patterns.ENCSR977HTH_ChIP_ZNF18_HEK293_ENCSR114LPS_profile_pattern_10.n_201-vs-ZNF18-201.alignment profile-znf_b1h_alignment/ZNF18-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF184-201/ChipExo_models_ZNF184_profile-pos.pattern_3.n_29-vs-ZNF184-201.alignment profile-znf_b1h_alignment/ZNF184-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR020UPN_ChIP_ZNF184_HEK293_ENCSR263RCM_profile_pattern_0.n_2923-vs-ZNF184-201.alignment profile-znf_b1h_alignment/ZNF184-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR020UPN_ChIP_ZNF184_HEK293_ENCSR263RCM_profile_pattern_11.n_35-vs-ZNF184-201.alignment profile-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR020UPN_ChIP_ZNF184_HEK293_ENCSR263RCM_profile_pattern_12.n_30-vs-ZNF184-201.alignment profile-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR020UPN_ChIP_ZNF184_HEK293_ENCSR263RCM_profile_pattern_13.n_28-vs-ZNF184-201.alignment profile-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR020UPN_ChIP_ZNF184_HEK293_ENCSR263RCM_profile_pattern_14.n_23-vs-ZNF184-201.alignment profile-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR020UPN_ChIP_ZNF184_HEK293_ENCSR263RCM_profile_pattern_15.n_21-vs-ZNF184-201.alignment profile-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR020UPN_ChIP_ZNF184_HEK293_ENCSR263RCM_profile_pattern_1.n_1686-vs-ZNF184-201.alignment profile-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR020UPN_ChIP_ZNF184_HEK293_ENCSR263RCM_profile_pattern_2.n_1351-vs-ZNF184-201.alignment profile-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR020UPN_ChIP_ZNF184_HEK293_ENCSR263RCM_profile_pattern_3.n_1162-vs-ZNF184-201.alignment profile-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR020UPN_ChIP_ZNF184_HEK293_ENCSR263RCM_profile_pattern_4.n_94-vs-ZNF184-201.alignment profile-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR020UPN_ChIP_ZNF184_HEK293_ENCSR263RCM_profile_pattern_5.n_93-vs-ZNF184-201.alignment profile-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR020UPN_ChIP_ZNF184_HEK293_ENCSR263RCM_profile_pattern_6.n_50-vs-ZNF184-201.alignment profile-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR020UPN_ChIP_ZNF184_HEK293_ENCSR263RCM_profile_pattern_7.n_50-vs-ZNF184-201.alignment profile-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR020UPN_ChIP_ZNF184_HEK293_ENCSR263RCM_profile_pattern_8.n_48-vs-ZNF184-201.alignment profile-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR020UPN_ChIP_ZNF184_HEK293_ENCSR263RCM_profile_pattern_9.n_46-vs-ZNF184-201.alignment profile-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR526HRN_ChIP_ZNF184_K562_ENCSR322UJZ_profile_pattern_0.n_526-vs-ZNF184-201.alignment profile-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR526HRN_ChIP_ZNF184_K562_ENCSR322UJZ_profile_pattern_1.n_136-vs-ZNF184-201.alignment profile-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR526HRN_ChIP_ZNF184_K562_ENCSR322UJZ_profile_pattern_2.n_92-vs-ZNF184-201.alignment profile-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR526HRN_ChIP_ZNF184_K562_ENCSR322UJZ_profile_pattern_3.n_90-vs-ZNF184-201.alignment profile-znf_b1h_alignment/ZNF184-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR526HRN_ChIP_ZNF184_K562_ENCSR322UJZ_profile_pattern_5.n_32-vs-ZNF184-201.alignment profile-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR526HRN_ChIP_ZNF184_K562_ENCSR322UJZ_profile_pattern_6.n_26-vs-ZNF184-201.alignment profile-znf_b1h_alignment/ZNF184-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR546IHU_ChIP_ZNF184_K562_ENCSR869HTL_profile_pattern_0.n_2000-vs-ZNF184-201.alignment profile-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR546IHU_ChIP_ZNF184_K562_ENCSR869HTL_profile_pattern_10.n_94-vs-ZNF184-201.alignment profile-znf_b1h_alignment/ZNF184-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR621ATC_ChIP_ZNF184_K562_ENCSR229FNP_profile_pattern_8.n_273-vs-ZNF184-201.alignment profile-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR621ATC_ChIP_ZNF184_K562_ENCSR229FNP_profile_pattern_9.n_258-vs-ZNF184-201.alignment profile-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR640STN_ChIP_ZNF184_WTC11_ENCSR901OTZ_profile_pattern_0.n_845-vs-ZNF184-201.alignment profile-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR640STN_ChIP_ZNF184_WTC11_ENCSR901OTZ_profile_pattern_10.n_23-vs-ZNF184-201.alignment profile-znf_b1h_alignment/ZNF184-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR640STN_ChIP_ZNF184_WTC11_ENCSR901OTZ_profile_pattern_2.n_521-vs-ZNF184-201.alignment profile-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR640STN_ChIP_ZNF184_WTC11_ENCSR901OTZ_profile_pattern_3.n_449-vs-ZNF184-201.alignment profile-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR640STN_ChIP_ZNF184_WTC11_ENCSR901OTZ_profile_pattern_4.n_345-vs-ZNF184-201.alignment profile-znf_b1h_alignment/ZNF184-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR640STN_ChIP_ZNF184_WTC11_ENCSR901OTZ_profile_pattern_6.n_117-vs-ZNF184-201.alignment profile-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR640STN_ChIP_ZNF184_WTC11_ENCSR901OTZ_profile_pattern_7.n_92-vs-ZNF184-201.alignment profile-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR640STN_ChIP_ZNF184_WTC11_ENCSR901OTZ_profile_pattern_8.n_75-vs-ZNF184-201.alignment profile-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF184-201/pos_patterns.ENCSR640STN_ChIP_ZNF184_WTC11_ENCSR901OTZ_profile_pattern_9.n_53-vs-ZNF184-201.alignment profile-znf_b1h_alignment/ZNF184-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF189-201/ChipExo_models_ZNF189_profile-pos.pattern_0.n_4271-vs-ZNF189-201.alignment profile-znf_b1h_alignment/ZNF189-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF189-201/ChipExo_models_ZNF189_profile-pos.pattern_1.n_592-vs-ZNF189-201.alignment profile-znf_b1h_alignment/ZNF189-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF189-201/pos_patterns.ENCSR163RYW_ChIP_ZNF189_HEK293_ENCSR177YND_profile_pattern_19.n_35-vs-ZNF189-201.alignment profile-znf_b1h_alignment/ZNF189-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF189-201/pos_patterns.ENCSR163RYW_ChIP_ZNF189_HEK293_ENCSR177YND_profile_pattern_20.n_35-vs-ZNF189-201.alignment profile-znf_b1h_alignment/ZNF189-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF189-201/pos_patterns.ENCSR163RYW_ChIP_ZNF189_HEK293_ENCSR177YND_profile_pattern_21.n_31-vs-ZNF189-201.alignment profile-znf_b1h_alignment/ZNF189-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF189-201/pos_patterns.ENCSR163RYW_ChIP_ZNF189_HEK293_ENCSR177YND_profile_pattern_22.n_28-vs-ZNF189-201.alignment profile-znf_b1h_alignment/ZNF189-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF189-201/pos_patterns.ENCSR163RYW_ChIP_ZNF189_HEK293_ENCSR177YND_profile_pattern_2.n_3057-vs-ZNF189-201.alignment profile-znf_b1h_alignment/ZNF189-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF189-201/pos_patterns.ENCSR163RYW_ChIP_ZNF189_HEK293_ENCSR177YND_profile_pattern_3.n_1831-vs-ZNF189-201.alignment profile-znf_b1h_alignment/ZNF189-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF189-201/pos_patterns.ENCSR163RYW_ChIP_ZNF189_HEK293_ENCSR177YND_profile_pattern_4.n_1717-vs-ZNF189-201.alignment profile-znf_b1h_alignment/ZNF189-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF189-201/pos_patterns.ENCSR163RYW_ChIP_ZNF189_HEK293_ENCSR177YND_profile_pattern_5.n_733-vs-ZNF189-201.alignment profile-znf_b1h_alignment/ZNF189-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF189-201/pos_patterns.ENCSR163RYW_ChIP_ZNF189_HEK293_ENCSR177YND_profile_pattern_6.n_707-vs-ZNF189-201.alignment profile-znf_b1h_alignment/ZNF189-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF189-201/pos_patterns.ENCSR163RYW_ChIP_ZNF189_HEK293_ENCSR177YND_profile_pattern_7.n_399-vs-ZNF189-201.alignment profile-znf_b1h_alignment/ZNF189-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF189-201/pos_patterns.ENCSR163RYW_ChIP_ZNF189_HEK293_ENCSR177YND_profile_pattern_8.n_386-vs-ZNF189-201.alignment profile-znf_b1h_alignment/ZNF189-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF189-201/pos_patterns.ENCSR163RYW_ChIP_ZNF189_HEK293_ENCSR177YND_profile_pattern_9.n_327-vs-ZNF189-201.alignment profile-znf_b1h_alignment/ZNF189-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF19-201/ChipExo_models_ZNF19_profile-pos.pattern_0.n_206-vs-ZNF19-201.alignment profile-znf_b1h_alignment/ZNF19-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF19-201/ChipExo_models_ZNF19_profile-pos.pattern_1.n_169-vs-ZNF19-201.alignment profile-znf_b1h_alignment/ZNF19-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF19-201/ChipExo_models_ZNF19_profile-pos.pattern_2.n_53-vs-ZNF19-201.alignment profile-znf_b1h_alignment/ZNF19-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF19-201/ChipExo_models_ZNF19_profile-pos.pattern_3.n_25-vs-ZNF19-201.alignment profile-znf_b1h_alignment/ZNF19-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF19-201/pos_patterns.ENCSR811JJM_ChIP_ZNF19_HEK293_ENCSR098YTO_profile_pattern_0.n_1220-vs-ZNF19-201.alignment profile-znf_b1h_alignment/ZNF19-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF19-201/pos_patterns.ENCSR811JJM_ChIP_ZNF19_HEK293_ENCSR098YTO_profile_pattern_1.n_321-vs-ZNF19-201.alignment profile-znf_b1h_alignment/ZNF19-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF19-201/pos_patterns.ENCSR811JJM_ChIP_ZNF19_HEK293_ENCSR098YTO_profile_pattern_2.n_112-vs-ZNF19-201.alignment profile-znf_b1h_alignment/ZNF19-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF197-202/ChipExo_models_ZNF197_profile-pos.pattern_0.n_177-vs-ZNF197-202.alignment profile-znf_b1h_alignment/ZNF197-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF197-202/ChipExo_models_ZNF197_profile-pos.pattern_1.n_60-vs-ZNF197-202.alignment profile-znf_b1h_alignment/ZNF197-202/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF197-202/ChipExo_models_ZNF197_profile-pos.pattern_3.n_50-vs-ZNF197-202.alignment profile-znf_b1h_alignment/ZNF197-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF197-202/ChipExo_models_ZNF197_profile-pos.pattern_4.n_49-vs-ZNF197-202.alignment profile-znf_b1h_alignment/ZNF197-202/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF197-202/ChipExo_models_ZNF197_profile-pos.pattern_6.n_39-vs-ZNF197-202.alignment profile-znf_b1h_alignment/ZNF197-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF197-202/ChipExo_models_ZNF197_profile-pos.pattern_7.n_31-vs-ZNF197-202.alignment profile-znf_b1h_alignment/ZNF197-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF197-202/ChipExo_models_ZNF197_profile-pos.pattern_8.n_26-vs-ZNF197-202.alignment profile-znf_b1h_alignment/ZNF197-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF197-202/ChipExo_models_ZNF197_profile-pos.pattern_9.n_25-vs-ZNF197-202.alignment profile-znf_b1h_alignment/ZNF197-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF197-202/neg_patterns.ENCSR580IAO_ChIP_ZNF197_K562_ENCSR964AWU_profile_pattern_0.n_53-vs-ZNF197-202.alignment profile-znf_b1h_alignment/ZNF197-202/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF197-202/neg_patterns.ENCSR580IAO_ChIP_ZNF197_K562_ENCSR964AWU_profile_pattern_2.n_23-vs-ZNF197-202.alignment profile-znf_b1h_alignment/ZNF197-202/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF200-201/Hughes_NB_models_ZNF200_profile-pos.pattern_9.n_23-vs-ZNF200-201.alignment profile-znf_b1h_alignment/ZNF200-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF20-201/pos_patterns.ENCSR720PDY_ChIP_ZNF20_HepG2_ENCSR794XBB_profile_pattern_11.n_39-vs-ZNF20-201.alignment profile-znf_b1h_alignment/ZNF20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF20-201/pos_patterns.ENCSR720PDY_ChIP_ZNF20_HepG2_ENCSR794XBB_profile_pattern_12.n_30-vs-ZNF20-201.alignment profile-znf_b1h_alignment/ZNF20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF20-201/pos_patterns.ENCSR720PDY_ChIP_ZNF20_HepG2_ENCSR794XBB_profile_pattern_13.n_27-vs-ZNF20-201.alignment profile-znf_b1h_alignment/ZNF20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF20-201/pos_patterns.ENCSR720PDY_ChIP_ZNF20_HepG2_ENCSR794XBB_profile_pattern_14.n_26-vs-ZNF20-201.alignment profile-znf_b1h_alignment/ZNF20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF20-201/pos_patterns.ENCSR720PDY_ChIP_ZNF20_HepG2_ENCSR794XBB_profile_pattern_1.n_242-vs-ZNF20-201.alignment profile-znf_b1h_alignment/ZNF20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF20-201/pos_patterns.ENCSR720PDY_ChIP_ZNF20_HepG2_ENCSR794XBB_profile_pattern_2.n_234-vs-ZNF20-201.alignment profile-znf_b1h_alignment/ZNF20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF20-201/pos_patterns.ENCSR720PDY_ChIP_ZNF20_HepG2_ENCSR794XBB_profile_pattern_3.n_152-vs-ZNF20-201.alignment profile-znf_b1h_alignment/ZNF20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF20-201/pos_patterns.ENCSR720PDY_ChIP_ZNF20_HepG2_ENCSR794XBB_profile_pattern_4.n_128-vs-ZNF20-201.alignment profile-znf_b1h_alignment/ZNF20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF20-201/pos_patterns.ENCSR720PDY_ChIP_ZNF20_HepG2_ENCSR794XBB_profile_pattern_5.n_87-vs-ZNF20-201.alignment profile-znf_b1h_alignment/ZNF20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF20-201/pos_patterns.ENCSR720PDY_ChIP_ZNF20_HepG2_ENCSR794XBB_profile_pattern_6.n_86-vs-ZNF20-201.alignment profile-znf_b1h_alignment/ZNF20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF20-201/pos_patterns.ENCSR720PDY_ChIP_ZNF20_HepG2_ENCSR794XBB_profile_pattern_7.n_74-vs-ZNF20-201.alignment profile-znf_b1h_alignment/ZNF20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF20-201/pos_patterns.ENCSR720PDY_ChIP_ZNF20_HepG2_ENCSR794XBB_profile_pattern_8.n_51-vs-ZNF20-201.alignment profile-znf_b1h_alignment/ZNF20-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF202-201/ChipExo_models_ZNF202_profile-pos.pattern_0.n_3374-vs-ZNF202-201.alignment profile-znf_b1h_alignment/ZNF202-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF202-201/neg_patterns.ENCSR996FYT_ChIP_ZNF202_HEK293_ENCSR639ETZ_profile_pattern_1.n_92-vs-ZNF202-201.alignment profile-znf_b1h_alignment/ZNF202-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF202-201/pos_patterns.ENCSR996FYT_ChIP_ZNF202_HEK293_ENCSR639ETZ_profile_pattern_12.n_50-vs-ZNF202-201.alignment profile-znf_b1h_alignment/ZNF202-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF205-201/pos_patterns.ENCSR157CEN_ChIP_ZNF205_HepG2_ENCSR574PLQ_profile_pattern_8.n_290-vs-ZNF205-201.alignment profile-znf_b1h_alignment/ZNF205-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF205-201/pos_patterns.ENCSR157CEN_ChIP_ZNF205_HepG2_ENCSR574PLQ_profile_pattern_9.n_258-vs-ZNF205-201.alignment profile-znf_b1h_alignment/ZNF205-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF212-201/pos_patterns.ENCSR002ZGC_ChIP_ZNF212_K562_ENCSR601LYN_profile_pattern_9.n_26-vs-ZNF212-201.alignment profile-znf_b1h_alignment/ZNF212-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF219-201/neg_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_profile_pattern_17.n_39-vs-ZNF219-201.alignment profile-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF219-201/neg_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_profile_pattern_18.n_36-vs-ZNF219-201.alignment profile-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF219-201/neg_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_profile_pattern_19.n_34-vs-ZNF219-201.alignment profile-znf_b1h_alignment/ZNF219-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF219-201/neg_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_profile_pattern_20.n_32-vs-ZNF219-201.alignment profile-znf_b1h_alignment/ZNF219-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF219-201/neg_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_profile_pattern_6.n_154-vs-ZNF219-201.alignment profile-znf_b1h_alignment/ZNF219-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF219-201/neg_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_profile_pattern_9.n_90-vs-ZNF219-201.alignment profile-znf_b1h_alignment/ZNF219-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_profile_pattern_11.n_663-vs-ZNF219-201.alignment profile-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_profile_pattern_12.n_647-vs-ZNF219-201.alignment profile-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_profile_pattern_13.n_424-vs-ZNF219-201.alignment profile-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_profile_pattern_14.n_379-vs-ZNF219-201.alignment profile-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_profile_pattern_15.n_361-vs-ZNF219-201.alignment profile-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_profile_pattern_16.n_319-vs-ZNF219-201.alignment profile-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_profile_pattern_17.n_286-vs-ZNF219-201.alignment profile-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_profile_pattern_18.n_271-vs-ZNF219-201.alignment profile-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_profile_pattern_19.n_205-vs-ZNF219-201.alignment profile-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_profile_pattern_1.n_5967-vs-ZNF219-201.alignment profile-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_profile_pattern_20.n_120-vs-ZNF219-201.alignment profile-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_profile_pattern_21.n_110-vs-ZNF219-201.alignment profile-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_profile_pattern_22.n_76-vs-ZNF219-201.alignment profile-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_profile_pattern_23.n_60-vs-ZNF219-201.alignment profile-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_profile_pattern_24.n_45-vs-ZNF219-201.alignment profile-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_profile_pattern_25.n_39-vs-ZNF219-201.alignment profile-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_profile_pattern_26.n_33-vs-ZNF219-201.alignment profile-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_profile_pattern_27.n_32-vs-ZNF219-201.alignment profile-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_profile_pattern_28.n_30-vs-ZNF219-201.alignment profile-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_profile_pattern_29.n_26-vs-ZNF219-201.alignment profile-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_profile_pattern_2.n_4301-vs-ZNF219-201.alignment profile-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_profile_pattern_30.n_25-vs-ZNF219-201.alignment profile-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_profile_pattern_31.n_24-vs-ZNF219-201.alignment profile-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_profile_pattern_32.n_22-vs-ZNF219-201.alignment profile-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_profile_pattern_33.n_20-vs-ZNF219-201.alignment profile-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_profile_pattern_3.n_4283-vs-ZNF219-201.alignment profile-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_profile_pattern_4.n_3346-vs-ZNF219-201.alignment profile-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_profile_pattern_5.n_2867-vs-ZNF219-201.alignment profile-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_profile_pattern_6.n_2052-vs-ZNF219-201.alignment profile-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_profile_pattern_7.n_841-vs-ZNF219-201.alignment profile-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_profile_pattern_8.n_827-vs-ZNF219-201.alignment profile-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF219-201/pos_patterns.ENCSR243BPI_ChIP_ZNF219_HepG2_ENCSR127BIS_profile_pattern_9.n_747-vs-ZNF219-201.alignment profile-znf_b1h_alignment/ZNF219-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF2-201/ChipExo_models_ZNF2_profile-pos.pattern_0.n_1907-vs-ZNF2-201.alignment profile-znf_b1h_alignment/ZNF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF2-201/ChipExo_models_ZNF2_profile-pos.pattern_1.n_1134-vs-ZNF2-201.alignment profile-znf_b1h_alignment/ZNF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF2-201/ChipExo_models_ZNF2_profile-pos.pattern_2.n_1081-vs-ZNF2-201.alignment profile-znf_b1h_alignment/ZNF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF2-201/ChipExo_models_ZNF2_profile-pos.pattern_3.n_130-vs-ZNF2-201.alignment profile-znf_b1h_alignment/ZNF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF2-201/ChipExo_models_ZNF2_profile-pos.pattern_4.n_67-vs-ZNF2-201.alignment profile-znf_b1h_alignment/ZNF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF2-201/ChipExo_models_ZNF2_profile-pos.pattern_5.n_29-vs-ZNF2-201.alignment profile-znf_b1h_alignment/ZNF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF2-201/ChipExo_models_ZNF2_profile-pos.pattern_6.n_24-vs-ZNF2-201.alignment profile-znf_b1h_alignment/ZNF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF2-201/ChipExo_models_ZNF2_profile-pos.pattern_7.n_21-vs-ZNF2-201.alignment profile-znf_b1h_alignment/ZNF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF2-201/neg_patterns.ENCSR011CKE_ChIP_ZNF2_HEK293_ENCSR686INM_profile_pattern_0.n_45-vs-ZNF2-201.alignment profile-znf_b1h_alignment/ZNF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF2-201/pos_patterns.ENCSR011CKE_ChIP_ZNF2_HEK293_ENCSR686INM_profile_pattern_0.n_6526-vs-ZNF2-201.alignment profile-znf_b1h_alignment/ZNF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF2-201/pos_patterns.ENCSR011CKE_ChIP_ZNF2_HEK293_ENCSR686INM_profile_pattern_10.n_94-vs-ZNF2-201.alignment profile-znf_b1h_alignment/ZNF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF2-201/pos_patterns.ENCSR011CKE_ChIP_ZNF2_HEK293_ENCSR686INM_profile_pattern_1.n_835-vs-ZNF2-201.alignment profile-znf_b1h_alignment/ZNF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF2-201/pos_patterns.ENCSR011CKE_ChIP_ZNF2_HEK293_ENCSR686INM_profile_pattern_2.n_694-vs-ZNF2-201.alignment profile-znf_b1h_alignment/ZNF2-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF2-201/pos_patterns.ENCSR011CKE_ChIP_ZNF2_HEK293_ENCSR686INM_profile_pattern_6.n_208-vs-ZNF2-201.alignment profile-znf_b1h_alignment/ZNF2-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF2-201/pos_patterns.ENCSR011CKE_ChIP_ZNF2_HEK293_ENCSR686INM_profile_pattern_8.n_150-vs-ZNF2-201.alignment profile-znf_b1h_alignment/ZNF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF2-201/pos_patterns.ENCSR011CKE_ChIP_ZNF2_HEK293_ENCSR686INM_profile_pattern_9.n_117-vs-ZNF2-201.alignment profile-znf_b1h_alignment/ZNF2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF221-201/neg_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_profile_pattern_0.n_83-vs-ZNF221-201.alignment profile-znf_b1h_alignment/ZNF221-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF221-201/neg_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_profile_pattern_2.n_46-vs-ZNF221-201.alignment profile-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF221-201/neg_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_profile_pattern_3.n_43-vs-ZNF221-201.alignment profile-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF221-201/neg_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_profile_pattern_4.n_38-vs-ZNF221-201.alignment profile-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF221-201/neg_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_profile_pattern_5.n_36-vs-ZNF221-201.alignment profile-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF221-201/neg_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_profile_pattern_6.n_31-vs-ZNF221-201.alignment profile-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF221-201/neg_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_profile_pattern_7.n_29-vs-ZNF221-201.alignment profile-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF221-201/neg_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_profile_pattern_8.n_25-vs-ZNF221-201.alignment profile-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF221-201/neg_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_profile_pattern_9.n_22-vs-ZNF221-201.alignment profile-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR194BBY_ChIP_ZNF221_HEK293_ENCSR607NLH_profile_pattern_0.n_155-vs-ZNF221-201.alignment profile-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR194BBY_ChIP_ZNF221_HEK293_ENCSR607NLH_profile_pattern_1.n_104-vs-ZNF221-201.alignment profile-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR194BBY_ChIP_ZNF221_HEK293_ENCSR607NLH_profile_pattern_2.n_95-vs-ZNF221-201.alignment profile-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR194BBY_ChIP_ZNF221_HEK293_ENCSR607NLH_profile_pattern_3.n_32-vs-ZNF221-201.alignment profile-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR194BBY_ChIP_ZNF221_HEK293_ENCSR607NLH_profile_pattern_4.n_29-vs-ZNF221-201.alignment profile-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR194BBY_ChIP_ZNF221_HEK293_ENCSR607NLH_profile_pattern_5.n_28-vs-ZNF221-201.alignment profile-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_profile_pattern_0.n_1741-vs-ZNF221-201.alignment profile-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_profile_pattern_10.n_445-vs-ZNF221-201.alignment profile-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_profile_pattern_11.n_429-vs-ZNF221-201.alignment profile-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_profile_pattern_12.n_423-vs-ZNF221-201.alignment profile-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_profile_pattern_13.n_422-vs-ZNF221-201.alignment profile-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_profile_pattern_14.n_352-vs-ZNF221-201.alignment profile-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_profile_pattern_15.n_330-vs-ZNF221-201.alignment profile-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_profile_pattern_16.n_188-vs-ZNF221-201.alignment profile-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_profile_pattern_17.n_145-vs-ZNF221-201.alignment profile-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_profile_pattern_18.n_131-vs-ZNF221-201.alignment profile-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_profile_pattern_19.n_122-vs-ZNF221-201.alignment profile-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_profile_pattern_1.n_1197-vs-ZNF221-201.alignment profile-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_profile_pattern_20.n_102-vs-ZNF221-201.alignment profile-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_profile_pattern_21.n_46-vs-ZNF221-201.alignment profile-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_profile_pattern_2.n_911-vs-ZNF221-201.alignment profile-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_profile_pattern_3.n_887-vs-ZNF221-201.alignment profile-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_profile_pattern_4.n_802-vs-ZNF221-201.alignment profile-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_profile_pattern_5.n_703-vs-ZNF221-201.alignment profile-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_profile_pattern_6.n_668-vs-ZNF221-201.alignment profile-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_profile_pattern_7.n_549-vs-ZNF221-201.alignment profile-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_profile_pattern_8.n_522-vs-ZNF221-201.alignment profile-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF221-201/pos_patterns.ENCSR347HAM_ChIP_ZNF221_HepG2_ENCSR696HVQ_profile_pattern_9.n_460-vs-ZNF221-201.alignment profile-znf_b1h_alignment/ZNF221-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF22-201/Hughes_GR_models_ZNF22_profile-neg.pattern_0.n_171-vs-ZNF22-201.alignment profile-znf_b1h_alignment/ZNF22-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF22-201/Hughes_GR_models_ZNF22_profile-neg.pattern_10.n_21-vs-ZNF22-201.alignment profile-znf_b1h_alignment/ZNF22-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF227-201/neg_patterns.ENCSR877UJB_ChIP_ZNF227_MCF-7_ENCSR077NMC_profile_pattern_0.n_37-vs-ZNF227-201.alignment profile-znf_b1h_alignment/ZNF227-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF23-201/pos_patterns.ENCSR679KXF_ChIP_ZNF23_HEK293_ENCSR340HRP_profile_pattern_2.n_144-vs-ZNF23-201.alignment profile-znf_b1h_alignment/ZNF23-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF23-201/pos_patterns.ENCSR679KXF_ChIP_ZNF23_HEK293_ENCSR340HRP_profile_pattern_3.n_77-vs-ZNF23-201.alignment profile-znf_b1h_alignment/ZNF23-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF23-201/pos_patterns.ENCSR898IDK_ChIP_ZNF23_K562_ENCSR283CIN_profile_pattern_9.n_47-vs-ZNF23-201.alignment profile-znf_b1h_alignment/ZNF23-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF232-201/neg_patterns.ENCSR034IND_ChIP_ZNF232_WTC11_ENCSR769EFJ_profile_pattern_0.n_36-vs-ZNF232-201.alignment profile-znf_b1h_alignment/ZNF232-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR034IND_ChIP_ZNF232_WTC11_ENCSR769EFJ_profile_pattern_0.n_1259-vs-ZNF232-201.alignment profile-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR034IND_ChIP_ZNF232_WTC11_ENCSR769EFJ_profile_pattern_10.n_191-vs-ZNF232-201.alignment profile-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR034IND_ChIP_ZNF232_WTC11_ENCSR769EFJ_profile_pattern_11.n_134-vs-ZNF232-201.alignment profile-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR034IND_ChIP_ZNF232_WTC11_ENCSR769EFJ_profile_pattern_12.n_118-vs-ZNF232-201.alignment profile-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR034IND_ChIP_ZNF232_WTC11_ENCSR769EFJ_profile_pattern_13.n_106-vs-ZNF232-201.alignment profile-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR034IND_ChIP_ZNF232_WTC11_ENCSR769EFJ_profile_pattern_14.n_66-vs-ZNF232-201.alignment profile-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR034IND_ChIP_ZNF232_WTC11_ENCSR769EFJ_profile_pattern_15.n_52-vs-ZNF232-201.alignment profile-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR034IND_ChIP_ZNF232_WTC11_ENCSR769EFJ_profile_pattern_16.n_30-vs-ZNF232-201.alignment profile-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR034IND_ChIP_ZNF232_WTC11_ENCSR769EFJ_profile_pattern_1.n_496-vs-ZNF232-201.alignment profile-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR034IND_ChIP_ZNF232_WTC11_ENCSR769EFJ_profile_pattern_2.n_492-vs-ZNF232-201.alignment profile-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR034IND_ChIP_ZNF232_WTC11_ENCSR769EFJ_profile_pattern_3.n_401-vs-ZNF232-201.alignment profile-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR034IND_ChIP_ZNF232_WTC11_ENCSR769EFJ_profile_pattern_4.n_395-vs-ZNF232-201.alignment profile-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR034IND_ChIP_ZNF232_WTC11_ENCSR769EFJ_profile_pattern_5.n_362-vs-ZNF232-201.alignment profile-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR034IND_ChIP_ZNF232_WTC11_ENCSR769EFJ_profile_pattern_6.n_337-vs-ZNF232-201.alignment profile-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR034IND_ChIP_ZNF232_WTC11_ENCSR769EFJ_profile_pattern_7.n_296-vs-ZNF232-201.alignment profile-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR034IND_ChIP_ZNF232_WTC11_ENCSR769EFJ_profile_pattern_8.n_252-vs-ZNF232-201.alignment profile-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR034IND_ChIP_ZNF232_WTC11_ENCSR769EFJ_profile_pattern_9.n_208-vs-ZNF232-201.alignment profile-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR360ECJ_ChIP_ZNF232_K562_ENCSR185CCX_profile_pattern_0.n_876-vs-ZNF232-201.alignment profile-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR360ECJ_ChIP_ZNF232_K562_ENCSR185CCX_profile_pattern_10.n_78-vs-ZNF232-201.alignment profile-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR360ECJ_ChIP_ZNF232_K562_ENCSR185CCX_profile_pattern_11.n_65-vs-ZNF232-201.alignment profile-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR360ECJ_ChIP_ZNF232_K562_ENCSR185CCX_profile_pattern_12.n_54-vs-ZNF232-201.alignment profile-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR360ECJ_ChIP_ZNF232_K562_ENCSR185CCX_profile_pattern_13.n_51-vs-ZNF232-201.alignment profile-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR360ECJ_ChIP_ZNF232_K562_ENCSR185CCX_profile_pattern_14.n_27-vs-ZNF232-201.alignment profile-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR360ECJ_ChIP_ZNF232_K562_ENCSR185CCX_profile_pattern_1.n_235-vs-ZNF232-201.alignment profile-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR360ECJ_ChIP_ZNF232_K562_ENCSR185CCX_profile_pattern_2.n_224-vs-ZNF232-201.alignment profile-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR360ECJ_ChIP_ZNF232_K562_ENCSR185CCX_profile_pattern_3.n_149-vs-ZNF232-201.alignment profile-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR360ECJ_ChIP_ZNF232_K562_ENCSR185CCX_profile_pattern_4.n_132-vs-ZNF232-201.alignment profile-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR360ECJ_ChIP_ZNF232_K562_ENCSR185CCX_profile_pattern_5.n_132-vs-ZNF232-201.alignment profile-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR360ECJ_ChIP_ZNF232_K562_ENCSR185CCX_profile_pattern_6.n_115-vs-ZNF232-201.alignment profile-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR360ECJ_ChIP_ZNF232_K562_ENCSR185CCX_profile_pattern_7.n_92-vs-ZNF232-201.alignment profile-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR360ECJ_ChIP_ZNF232_K562_ENCSR185CCX_profile_pattern_8.n_86-vs-ZNF232-201.alignment profile-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR360ECJ_ChIP_ZNF232_K562_ENCSR185CCX_profile_pattern_9.n_82-vs-ZNF232-201.alignment profile-znf_b1h_alignment/ZNF232-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF232-201/pos_patterns.ENCSR837GLU_ChIP_ZNF232_HepG2_ENCSR348QIE_profile_pattern_0.n_3075-vs-ZNF232-201.alignment profile-znf_b1h_alignment/ZNF232-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF234-201/pos_patterns.ENCSR800ASH_ChIP_ZNF234_HepG2_ENCSR359AAY_profile_pattern_20.n_37-vs-ZNF234-201.alignment profile-znf_b1h_alignment/ZNF234-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF234-201/pos_patterns.ENCSR800ASH_ChIP_ZNF234_HepG2_ENCSR359AAY_profile_pattern_21.n_37-vs-ZNF234-201.alignment profile-znf_b1h_alignment/ZNF234-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF234-201/pos_patterns.ENCSR800ASH_ChIP_ZNF234_HepG2_ENCSR359AAY_profile_pattern_22.n_35-vs-ZNF234-201.alignment profile-znf_b1h_alignment/ZNF234-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF234-201/pos_patterns.ENCSR800ASH_ChIP_ZNF234_HepG2_ENCSR359AAY_profile_pattern_23.n_33-vs-ZNF234-201.alignment profile-znf_b1h_alignment/ZNF234-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF234-201/pos_patterns.ENCSR800ASH_ChIP_ZNF234_HepG2_ENCSR359AAY_profile_pattern_24.n_25-vs-ZNF234-201.alignment profile-znf_b1h_alignment/ZNF234-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF234-201/pos_patterns.ENCSR800ASH_ChIP_ZNF234_HepG2_ENCSR359AAY_profile_pattern_25.n_21-vs-ZNF234-201.alignment profile-znf_b1h_alignment/ZNF234-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF234-201/pos_patterns.ENCSR800ASH_ChIP_ZNF234_HepG2_ENCSR359AAY_profile_pattern_2.n_106-vs-ZNF234-201.alignment profile-znf_b1h_alignment/ZNF234-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF234-201/pos_patterns.ENCSR800ASH_ChIP_ZNF234_HepG2_ENCSR359AAY_profile_pattern_3.n_89-vs-ZNF234-201.alignment profile-znf_b1h_alignment/ZNF234-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF234-201/pos_patterns.ENCSR800ASH_ChIP_ZNF234_HepG2_ENCSR359AAY_profile_pattern_4.n_84-vs-ZNF234-201.alignment profile-znf_b1h_alignment/ZNF234-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF234-201/pos_patterns.ENCSR800ASH_ChIP_ZNF234_HepG2_ENCSR359AAY_profile_pattern_5.n_82-vs-ZNF234-201.alignment profile-znf_b1h_alignment/ZNF234-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF234-201/pos_patterns.ENCSR800ASH_ChIP_ZNF234_HepG2_ENCSR359AAY_profile_pattern_6.n_75-vs-ZNF234-201.alignment profile-znf_b1h_alignment/ZNF234-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF234-201/pos_patterns.ENCSR800ASH_ChIP_ZNF234_HepG2_ENCSR359AAY_profile_pattern_7.n_75-vs-ZNF234-201.alignment profile-znf_b1h_alignment/ZNF234-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF234-201/pos_patterns.ENCSR800ASH_ChIP_ZNF234_HepG2_ENCSR359AAY_profile_pattern_8.n_73-vs-ZNF234-201.alignment profile-znf_b1h_alignment/ZNF234-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF234-201/pos_patterns.ENCSR800ASH_ChIP_ZNF234_HepG2_ENCSR359AAY_profile_pattern_9.n_73-vs-ZNF234-201.alignment profile-znf_b1h_alignment/ZNF234-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF235-201/ChipExo_models_ZNF235_profile-pos.pattern_0.n_115-vs-ZNF235-201.alignment profile-znf_b1h_alignment/ZNF235-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF235-201/ChipExo_models_ZNF235_profile-pos.pattern_1.n_41-vs-ZNF235-201.alignment profile-znf_b1h_alignment/ZNF235-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF235-201/ChipExo_models_ZNF235_profile-pos.pattern_2.n_21-vs-ZNF235-201.alignment profile-znf_b1h_alignment/ZNF235-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF235-201/neg_patterns.ENCSR924KZA_ChIP_ZNF235_HepG2_ENCSR999NDV_profile_pattern_0.n_23-vs-ZNF235-201.alignment profile-znf_b1h_alignment/ZNF235-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF235-201/pos_patterns.ENCSR924KZA_ChIP_ZNF235_HepG2_ENCSR999NDV_profile_pattern_0.n_971-vs-ZNF235-201.alignment profile-znf_b1h_alignment/ZNF235-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF235-201/pos_patterns.ENCSR924KZA_ChIP_ZNF235_HepG2_ENCSR999NDV_profile_pattern_10.n_157-vs-ZNF235-201.alignment profile-znf_b1h_alignment/ZNF235-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF235-201/pos_patterns.ENCSR924KZA_ChIP_ZNF235_HepG2_ENCSR999NDV_profile_pattern_11.n_138-vs-ZNF235-201.alignment profile-znf_b1h_alignment/ZNF235-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF235-201/pos_patterns.ENCSR924KZA_ChIP_ZNF235_HepG2_ENCSR999NDV_profile_pattern_12.n_109-vs-ZNF235-201.alignment profile-znf_b1h_alignment/ZNF235-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF235-201/pos_patterns.ENCSR924KZA_ChIP_ZNF235_HepG2_ENCSR999NDV_profile_pattern_13.n_94-vs-ZNF235-201.alignment profile-znf_b1h_alignment/ZNF235-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF235-201/pos_patterns.ENCSR924KZA_ChIP_ZNF235_HepG2_ENCSR999NDV_profile_pattern_14.n_71-vs-ZNF235-201.alignment profile-znf_b1h_alignment/ZNF235-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF235-201/pos_patterns.ENCSR924KZA_ChIP_ZNF235_HepG2_ENCSR999NDV_profile_pattern_15.n_36-vs-ZNF235-201.alignment profile-znf_b1h_alignment/ZNF235-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF235-201/pos_patterns.ENCSR924KZA_ChIP_ZNF235_HepG2_ENCSR999NDV_profile_pattern_16.n_35-vs-ZNF235-201.alignment profile-znf_b1h_alignment/ZNF235-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF235-201/pos_patterns.ENCSR924KZA_ChIP_ZNF235_HepG2_ENCSR999NDV_profile_pattern_1.n_830-vs-ZNF235-201.alignment profile-znf_b1h_alignment/ZNF235-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF235-201/pos_patterns.ENCSR924KZA_ChIP_ZNF235_HepG2_ENCSR999NDV_profile_pattern_3.n_576-vs-ZNF235-201.alignment profile-znf_b1h_alignment/ZNF235-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR072PWP_ChIP_ZNF24_GM12878_ENCSR696HRR_profile_pattern_3.n_319-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR072PWP_ChIP_ZNF24_GM12878_ENCSR696HRR_profile_pattern_4.n_219-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR117WTM_ChIP_ZNF24_K562_ENCSR536QWE_profile_pattern_0.n_459-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR117WTM_ChIP_ZNF24_K562_ENCSR536QWE_profile_pattern_1.n_265-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR117WTM_ChIP_ZNF24_K562_ENCSR536QWE_profile_pattern_2.n_121-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR117WTM_ChIP_ZNF24_K562_ENCSR536QWE_profile_pattern_3.n_91-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR117WTM_ChIP_ZNF24_K562_ENCSR536QWE_profile_pattern_4.n_74-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR117WTM_ChIP_ZNF24_K562_ENCSR536QWE_profile_pattern_5.n_63-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR117WTM_ChIP_ZNF24_K562_ENCSR536QWE_profile_pattern_6.n_56-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR362NWP_ChIP_ZNF24_HepG2_ENCSR179TNV_profile_pattern_0.n_959-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR362NWP_ChIP_ZNF24_HepG2_ENCSR179TNV_profile_pattern_1.n_337-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR362NWP_ChIP_ZNF24_HepG2_ENCSR179TNV_profile_pattern_2.n_155-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR362NWP_ChIP_ZNF24_HepG2_ENCSR179TNV_profile_pattern_3.n_131-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR362NWP_ChIP_ZNF24_HepG2_ENCSR179TNV_profile_pattern_4.n_104-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR362NWP_ChIP_ZNF24_HepG2_ENCSR179TNV_profile_pattern_5.n_82-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR362NWP_ChIP_ZNF24_HepG2_ENCSR179TNV_profile_pattern_6.n_49-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR362NWP_ChIP_ZNF24_HepG2_ENCSR179TNV_profile_pattern_7.n_25-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR385AHH_ChIP_ZNF24_K562_ENCSR803RKQ_profile_pattern_0.n_732-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR385AHH_ChIP_ZNF24_K562_ENCSR803RKQ_profile_pattern_10.n_53-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR385AHH_ChIP_ZNF24_K562_ENCSR803RKQ_profile_pattern_11.n_51-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR385AHH_ChIP_ZNF24_K562_ENCSR803RKQ_profile_pattern_12.n_26-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR385AHH_ChIP_ZNF24_K562_ENCSR803RKQ_profile_pattern_13.n_22-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR385AHH_ChIP_ZNF24_K562_ENCSR803RKQ_profile_pattern_1.n_271-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR385AHH_ChIP_ZNF24_K562_ENCSR803RKQ_profile_pattern_2.n_154-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR385AHH_ChIP_ZNF24_K562_ENCSR803RKQ_profile_pattern_3.n_134-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR385AHH_ChIP_ZNF24_K562_ENCSR803RKQ_profile_pattern_4.n_110-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR385AHH_ChIP_ZNF24_K562_ENCSR803RKQ_profile_pattern_5.n_105-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR385AHH_ChIP_ZNF24_K562_ENCSR803RKQ_profile_pattern_6.n_101-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR385AHH_ChIP_ZNF24_K562_ENCSR803RKQ_profile_pattern_7.n_90-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR385AHH_ChIP_ZNF24_K562_ENCSR803RKQ_profile_pattern_8.n_87-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR503VTG_ChIP_ZNF24_MCF-7_ENCSR910FKH_profile_pattern_0.n_794-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR791AGT_ChIP_ZNF24_HepG2_ENCSR109TRH_profile_pattern_2.n_67-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR984MDV_ChIP_ZNF24_HEK293_ENCSR012PCW_profile_pattern_3.n_36-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR984MDV_ChIP_ZNF24_HEK293_ENCSR012PCW_profile_pattern_4.n_25-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/neg_patterns.ENCSR984MDV_ChIP_ZNF24_HEK293_ENCSR012PCW_profile_pattern_5.n_20-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR072PWP_ChIP_ZNF24_GM12878_ENCSR696HRR_profile_pattern_0.n_5013-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR072PWP_ChIP_ZNF24_GM12878_ENCSR696HRR_profile_pattern_10.n_194-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR072PWP_ChIP_ZNF24_GM12878_ENCSR696HRR_profile_pattern_11.n_141-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR072PWP_ChIP_ZNF24_GM12878_ENCSR696HRR_profile_pattern_12.n_119-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR072PWP_ChIP_ZNF24_GM12878_ENCSR696HRR_profile_pattern_13.n_52-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR072PWP_ChIP_ZNF24_GM12878_ENCSR696HRR_profile_pattern_14.n_21-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR072PWP_ChIP_ZNF24_GM12878_ENCSR696HRR_profile_pattern_15.n_20-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR072PWP_ChIP_ZNF24_GM12878_ENCSR696HRR_profile_pattern_1.n_2970-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR072PWP_ChIP_ZNF24_GM12878_ENCSR696HRR_profile_pattern_2.n_2851-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR072PWP_ChIP_ZNF24_GM12878_ENCSR696HRR_profile_pattern_3.n_2421-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR072PWP_ChIP_ZNF24_GM12878_ENCSR696HRR_profile_pattern_4.n_1653-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR072PWP_ChIP_ZNF24_GM12878_ENCSR696HRR_profile_pattern_5.n_1651-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR072PWP_ChIP_ZNF24_GM12878_ENCSR696HRR_profile_pattern_6.n_872-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF24-201/pos_patterns.ENCSR072PWP_ChIP_ZNF24_GM12878_ENCSR696HRR_profile_pattern_7.n_623-vs-ZNF24-201.alignment profile-znf_b1h_alignment/ZNF24-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF251-201/pos_patterns.ENCSR605KVV_ChIP_ZNF251_HepG2_ENCSR452AEX_profile_pattern_3.n_137-vs-ZNF251-201.alignment profile-znf_b1h_alignment/ZNF251-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF251-201/pos_patterns.ENCSR605KVV_ChIP_ZNF251_HepG2_ENCSR452AEX_profile_pattern_4.n_133-vs-ZNF251-201.alignment profile-znf_b1h_alignment/ZNF251-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF251-201/pos_patterns.ENCSR605KVV_ChIP_ZNF251_HepG2_ENCSR452AEX_profile_pattern_7.n_96-vs-ZNF251-201.alignment profile-znf_b1h_alignment/ZNF251-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF251-201/pos_patterns.ENCSR605KVV_ChIP_ZNF251_HepG2_ENCSR452AEX_profile_pattern_8.n_57-vs-ZNF251-201.alignment profile-znf_b1h_alignment/ZNF251-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF251-201/pos_patterns.ENCSR605KVV_ChIP_ZNF251_HepG2_ENCSR452AEX_profile_pattern_9.n_49-vs-ZNF251-201.alignment profile-znf_b1h_alignment/ZNF251-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF25-201/ChipExo_models_ZNF25_profile-pos.pattern_0.n_46-vs-ZNF25-201.alignment profile-znf_b1h_alignment/ZNF25-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF25-201/ChipExo_models_ZNF25_profile-pos.pattern_1.n_32-vs-ZNF25-201.alignment profile-znf_b1h_alignment/ZNF25-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF25-201/neg_patterns.ENCSR384SQB_ChIP_ZNF25_HepG2_ENCSR662YFU_profile_pattern_0.n_30-vs-ZNF25-201.alignment profile-znf_b1h_alignment/ZNF25-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF25-201/neg_patterns.ENCSR384SQB_ChIP_ZNF25_HepG2_ENCSR662YFU_profile_pattern_1.n_25-vs-ZNF25-201.alignment profile-znf_b1h_alignment/ZNF25-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF25-201/neg_patterns.ENCSR384SQB_ChIP_ZNF25_HepG2_ENCSR662YFU_profile_pattern_2.n_24-vs-ZNF25-201.alignment profile-znf_b1h_alignment/ZNF25-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF25-201/neg_patterns.ENCSR384SQB_ChIP_ZNF25_HepG2_ENCSR662YFU_profile_pattern_3.n_23-vs-ZNF25-201.alignment profile-znf_b1h_alignment/ZNF25-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF25-201/pos_patterns.ENCSR384SQB_ChIP_ZNF25_HepG2_ENCSR662YFU_profile_pattern_0.n_474-vs-ZNF25-201.alignment profile-znf_b1h_alignment/ZNF25-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF25-201/pos_patterns.ENCSR384SQB_ChIP_ZNF25_HepG2_ENCSR662YFU_profile_pattern_10.n_74-vs-ZNF25-201.alignment profile-znf_b1h_alignment/ZNF25-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF25-201/pos_patterns.ENCSR384SQB_ChIP_ZNF25_HepG2_ENCSR662YFU_profile_pattern_11.n_66-vs-ZNF25-201.alignment profile-znf_b1h_alignment/ZNF25-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF25-201/pos_patterns.ENCSR384SQB_ChIP_ZNF25_HepG2_ENCSR662YFU_profile_pattern_13.n_51-vs-ZNF25-201.alignment profile-znf_b1h_alignment/ZNF25-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF25-201/pos_patterns.ENCSR384SQB_ChIP_ZNF25_HepG2_ENCSR662YFU_profile_pattern_14.n_47-vs-ZNF25-201.alignment profile-znf_b1h_alignment/ZNF25-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF25-201/pos_patterns.ENCSR384SQB_ChIP_ZNF25_HepG2_ENCSR662YFU_profile_pattern_15.n_41-vs-ZNF25-201.alignment profile-znf_b1h_alignment/ZNF25-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF25-201/pos_patterns.ENCSR384SQB_ChIP_ZNF25_HepG2_ENCSR662YFU_profile_pattern_16.n_38-vs-ZNF25-201.alignment profile-znf_b1h_alignment/ZNF25-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF25-201/pos_patterns.ENCSR384SQB_ChIP_ZNF25_HepG2_ENCSR662YFU_profile_pattern_17.n_23-vs-ZNF25-201.alignment profile-znf_b1h_alignment/ZNF25-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF25-201/pos_patterns.ENCSR384SQB_ChIP_ZNF25_HepG2_ENCSR662YFU_profile_pattern_18.n_20-vs-ZNF25-201.alignment profile-znf_b1h_alignment/ZNF25-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF253-201/pos_patterns.ENCSR569GKR_ChIP_ZNF253_HepG2_ENCSR454FFH_profile_pattern_4.n_241-vs-ZNF253-201.alignment profile-znf_b1h_alignment/ZNF253-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF253-205/pos_patterns.ENCSR271RRH_ChIP_ZNF253_K562_ENCSR017VUA_profile_pattern_3.n_64-vs-ZNF253-205.alignment profile-znf_b1h_alignment/ZNF253-205/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF253-205/pos_patterns.ENCSR569GKR_ChIP_ZNF253_HepG2_ENCSR454FFH_profile_pattern_7.n_174-vs-ZNF253-205.alignment profile-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF253-205/pos_patterns.ENCSR569GKR_ChIP_ZNF253_HepG2_ENCSR454FFH_profile_pattern_8.n_155-vs-ZNF253-205.alignment profile-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF253-205/pos_patterns.ENCSR569GKR_ChIP_ZNF253_HepG2_ENCSR454FFH_profile_pattern_9.n_146-vs-ZNF253-205.alignment profile-znf_b1h_alignment/ZNF253-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF254-202/ChipExo_models_ZNF254_profile-pos.pattern_0.n_425-vs-ZNF254-202.alignment profile-znf_b1h_alignment/ZNF254-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF254-202/ChipExo_models_ZNF254_profile-pos.pattern_1.n_48-vs-ZNF254-202.alignment profile-znf_b1h_alignment/ZNF254-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF256-201/pos_patterns.ENCSR563JME_ChIP_ZNF256_HepG2_ENCSR089SSF_profile_pattern_0.n_412-vs-ZNF256-201.alignment profile-znf_b1h_alignment/ZNF256-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF256-201/pos_patterns.ENCSR563JME_ChIP_ZNF256_HepG2_ENCSR089SSF_profile_pattern_10.n_184-vs-ZNF256-201.alignment profile-znf_b1h_alignment/ZNF256-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF256-201/pos_patterns.ENCSR563JME_ChIP_ZNF256_HepG2_ENCSR089SSF_profile_pattern_11.n_170-vs-ZNF256-201.alignment profile-znf_b1h_alignment/ZNF256-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF256-201/pos_patterns.ENCSR563JME_ChIP_ZNF256_HepG2_ENCSR089SSF_profile_pattern_12.n_120-vs-ZNF256-201.alignment profile-znf_b1h_alignment/ZNF256-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF256-201/pos_patterns.ENCSR563JME_ChIP_ZNF256_HepG2_ENCSR089SSF_profile_pattern_13.n_111-vs-ZNF256-201.alignment profile-znf_b1h_alignment/ZNF256-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF256-201/pos_patterns.ENCSR563JME_ChIP_ZNF256_HepG2_ENCSR089SSF_profile_pattern_14.n_100-vs-ZNF256-201.alignment profile-znf_b1h_alignment/ZNF256-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF256-201/pos_patterns.ENCSR563JME_ChIP_ZNF256_HepG2_ENCSR089SSF_profile_pattern_15.n_70-vs-ZNF256-201.alignment profile-znf_b1h_alignment/ZNF256-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF256-201/pos_patterns.ENCSR563JME_ChIP_ZNF256_HepG2_ENCSR089SSF_profile_pattern_16.n_40-vs-ZNF256-201.alignment profile-znf_b1h_alignment/ZNF256-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF256-201/pos_patterns.ENCSR563JME_ChIP_ZNF256_HepG2_ENCSR089SSF_profile_pattern_17.n_38-vs-ZNF256-201.alignment profile-znf_b1h_alignment/ZNF256-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF256-201/pos_patterns.ENCSR563JME_ChIP_ZNF256_HepG2_ENCSR089SSF_profile_pattern_18.n_24-vs-ZNF256-201.alignment profile-znf_b1h_alignment/ZNF256-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF256-201/pos_patterns.ENCSR563JME_ChIP_ZNF256_HepG2_ENCSR089SSF_profile_pattern_1.n_370-vs-ZNF256-201.alignment profile-znf_b1h_alignment/ZNF256-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF256-201/pos_patterns.ENCSR563JME_ChIP_ZNF256_HepG2_ENCSR089SSF_profile_pattern_2.n_360-vs-ZNF256-201.alignment profile-znf_b1h_alignment/ZNF256-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF256-201/pos_patterns.ENCSR563JME_ChIP_ZNF256_HepG2_ENCSR089SSF_profile_pattern_3.n_297-vs-ZNF256-201.alignment profile-znf_b1h_alignment/ZNF256-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF256-201/pos_patterns.ENCSR563JME_ChIP_ZNF256_HepG2_ENCSR089SSF_profile_pattern_4.n_256-vs-ZNF256-201.alignment profile-znf_b1h_alignment/ZNF256-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF256-201/pos_patterns.ENCSR563JME_ChIP_ZNF256_HepG2_ENCSR089SSF_profile_pattern_5.n_244-vs-ZNF256-201.alignment profile-znf_b1h_alignment/ZNF256-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF256-201/pos_patterns.ENCSR563JME_ChIP_ZNF256_HepG2_ENCSR089SSF_profile_pattern_6.n_221-vs-ZNF256-201.alignment profile-znf_b1h_alignment/ZNF256-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF256-201/pos_patterns.ENCSR563JME_ChIP_ZNF256_HepG2_ENCSR089SSF_profile_pattern_7.n_219-vs-ZNF256-201.alignment profile-znf_b1h_alignment/ZNF256-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF256-201/pos_patterns.ENCSR563JME_ChIP_ZNF256_HepG2_ENCSR089SSF_profile_pattern_8.n_218-vs-ZNF256-201.alignment profile-znf_b1h_alignment/ZNF256-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF256-201/pos_patterns.ENCSR563JME_ChIP_ZNF256_HepG2_ENCSR089SSF_profile_pattern_9.n_184-vs-ZNF256-201.alignment profile-znf_b1h_alignment/ZNF256-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF257-201/ChipExo_models_ZNF257_profile-pos.pattern_0.n_13784-vs-ZNF257-201.alignment profile-znf_b1h_alignment/ZNF257-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF257-201/ChipExo_models_ZNF257_profile-pos.pattern_10.n_122-vs-ZNF257-201.alignment profile-znf_b1h_alignment/ZNF257-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF257-201/ChipExo_models_ZNF257_profile-pos.pattern_11.n_49-vs-ZNF257-201.alignment profile-znf_b1h_alignment/ZNF257-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF257-201/ChipExo_models_ZNF257_profile-pos.pattern_13.n_29-vs-ZNF257-201.alignment profile-znf_b1h_alignment/ZNF257-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF260-202/pos_patterns.ENCSR024ZIS_ChIP_ZNF260_HepG2_ENCSR178UCW_profile_pattern_12.n_28-vs-ZNF260-202.alignment profile-znf_b1h_alignment/ZNF260-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF260-202/pos_patterns.ENCSR024ZIS_ChIP_ZNF260_HepG2_ENCSR178UCW_profile_pattern_13.n_25-vs-ZNF260-202.alignment profile-znf_b1h_alignment/ZNF260-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF260-202/pos_patterns.ENCSR024ZIS_ChIP_ZNF260_HepG2_ENCSR178UCW_profile_pattern_14.n_24-vs-ZNF260-202.alignment profile-znf_b1h_alignment/ZNF260-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF260-202/pos_patterns.ENCSR024ZIS_ChIP_ZNF260_HepG2_ENCSR178UCW_profile_pattern_15.n_20-vs-ZNF260-202.alignment profile-znf_b1h_alignment/ZNF260-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF260-202/pos_patterns.ENCSR024ZIS_ChIP_ZNF260_HepG2_ENCSR178UCW_profile_pattern_1.n_99-vs-ZNF260-202.alignment profile-znf_b1h_alignment/ZNF260-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF260-202/pos_patterns.ENCSR024ZIS_ChIP_ZNF260_HepG2_ENCSR178UCW_profile_pattern_2.n_70-vs-ZNF260-202.alignment profile-znf_b1h_alignment/ZNF260-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF260-202/pos_patterns.ENCSR024ZIS_ChIP_ZNF260_HepG2_ENCSR178UCW_profile_pattern_3.n_64-vs-ZNF260-202.alignment profile-znf_b1h_alignment/ZNF260-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF260-202/pos_patterns.ENCSR024ZIS_ChIP_ZNF260_HepG2_ENCSR178UCW_profile_pattern_4.n_63-vs-ZNF260-202.alignment profile-znf_b1h_alignment/ZNF260-202/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF260-202/pos_patterns.ENCSR024ZIS_ChIP_ZNF260_HepG2_ENCSR178UCW_profile_pattern_9.n_33-vs-ZNF260-202.alignment profile-znf_b1h_alignment/ZNF260-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF26-201/ChipExo_models_ZNF26_profile-pos.pattern_0.n_1677-vs-ZNF26-201.alignment profile-znf_b1h_alignment/ZNF26-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF26-201/neg_patterns.ENCSR028EGI_ChIP_ZNF26_HEK293_ENCSR065HJU_profile_pattern_3.n_34-vs-ZNF26-201.alignment profile-znf_b1h_alignment/ZNF26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF26-201/neg_patterns.ENCSR028EGI_ChIP_ZNF26_HEK293_ENCSR065HJU_profile_pattern_4.n_32-vs-ZNF26-201.alignment profile-znf_b1h_alignment/ZNF26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF26-201/neg_patterns.ENCSR028EGI_ChIP_ZNF26_HEK293_ENCSR065HJU_profile_pattern_5.n_30-vs-ZNF26-201.alignment profile-znf_b1h_alignment/ZNF26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF26-201/neg_patterns.ENCSR028EGI_ChIP_ZNF26_HEK293_ENCSR065HJU_profile_pattern_6.n_25-vs-ZNF26-201.alignment profile-znf_b1h_alignment/ZNF26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF26-201/neg_patterns.ENCSR028EGI_ChIP_ZNF26_HEK293_ENCSR065HJU_profile_pattern_7.n_21-vs-ZNF26-201.alignment profile-znf_b1h_alignment/ZNF26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF26-201/pos_patterns.ENCSR028EGI_ChIP_ZNF26_HEK293_ENCSR065HJU_profile_pattern_0.n_1534-vs-ZNF26-201.alignment profile-znf_b1h_alignment/ZNF26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF26-201/pos_patterns.ENCSR028EGI_ChIP_ZNF26_HEK293_ENCSR065HJU_profile_pattern_10.n_38-vs-ZNF26-201.alignment profile-znf_b1h_alignment/ZNF26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF26-201/pos_patterns.ENCSR028EGI_ChIP_ZNF26_HEK293_ENCSR065HJU_profile_pattern_11.n_23-vs-ZNF26-201.alignment profile-znf_b1h_alignment/ZNF26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF26-201/pos_patterns.ENCSR028EGI_ChIP_ZNF26_HEK293_ENCSR065HJU_profile_pattern_1.n_726-vs-ZNF26-201.alignment profile-znf_b1h_alignment/ZNF26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF26-201/pos_patterns.ENCSR028EGI_ChIP_ZNF26_HEK293_ENCSR065HJU_profile_pattern_2.n_291-vs-ZNF26-201.alignment profile-znf_b1h_alignment/ZNF26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF26-201/pos_patterns.ENCSR028EGI_ChIP_ZNF26_HEK293_ENCSR065HJU_profile_pattern_3.n_106-vs-ZNF26-201.alignment profile-znf_b1h_alignment/ZNF26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF26-201/pos_patterns.ENCSR028EGI_ChIP_ZNF26_HEK293_ENCSR065HJU_profile_pattern_4.n_68-vs-ZNF26-201.alignment profile-znf_b1h_alignment/ZNF26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF26-201/pos_patterns.ENCSR028EGI_ChIP_ZNF26_HEK293_ENCSR065HJU_profile_pattern_5.n_63-vs-ZNF26-201.alignment profile-znf_b1h_alignment/ZNF26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF26-201/pos_patterns.ENCSR028EGI_ChIP_ZNF26_HEK293_ENCSR065HJU_profile_pattern_6.n_58-vs-ZNF26-201.alignment profile-znf_b1h_alignment/ZNF26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF26-201/pos_patterns.ENCSR028EGI_ChIP_ZNF26_HEK293_ENCSR065HJU_profile_pattern_7.n_48-vs-ZNF26-201.alignment profile-znf_b1h_alignment/ZNF26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF26-201/pos_patterns.ENCSR028EGI_ChIP_ZNF26_HEK293_ENCSR065HJU_profile_pattern_8.n_46-vs-ZNF26-201.alignment profile-znf_b1h_alignment/ZNF26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF26-201/pos_patterns.ENCSR028EGI_ChIP_ZNF26_HEK293_ENCSR065HJU_profile_pattern_9.n_41-vs-ZNF26-201.alignment profile-znf_b1h_alignment/ZNF26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/ChipExo_models_ZNF263_profile-pos.pattern_0.n_5685-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/ChipExo_models_ZNF263_profile-pos.pattern_1.n_1846-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/ChipExo_models_ZNF263_profile-pos.pattern_2.n_570-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/ChipExo_models_ZNF263_profile-pos.pattern_3.n_565-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/ChipExo_models_ZNF263_profile-pos.pattern_4.n_527-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/ChipExo_models_ZNF263_profile-pos.pattern_5.n_256-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/ChipExo_models_ZNF263_profile-pos.pattern_6.n_222-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/ChipExo_models_ZNF263_profile-pos.pattern_7.n_149-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/ChipExo_models_ZNF263_profile-pos.pattern_8.n_40-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/ChipExo_models_ZNF263_profile-pos.pattern_9.n_32-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR000EVD_ChIP_ZNF263_HEK293_ENCSR143IUV_profile_pattern_0.n_1500-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR000EVD_ChIP_ZNF263_HEK293_ENCSR143IUV_profile_pattern_10.n_155-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR000EVD_ChIP_ZNF263_HEK293_ENCSR143IUV_profile_pattern_11.n_108-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR000EVD_ChIP_ZNF263_HEK293_ENCSR143IUV_profile_pattern_12.n_87-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR000EVD_ChIP_ZNF263_HEK293_ENCSR143IUV_profile_pattern_13.n_67-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR000EVD_ChIP_ZNF263_HEK293_ENCSR143IUV_profile_pattern_1.n_1084-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR000EVD_ChIP_ZNF263_HEK293_ENCSR143IUV_profile_pattern_2.n_509-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR000EVD_ChIP_ZNF263_HEK293_ENCSR143IUV_profile_pattern_3.n_409-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR000EVD_ChIP_ZNF263_HEK293_ENCSR143IUV_profile_pattern_4.n_370-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR000EVD_ChIP_ZNF263_HEK293_ENCSR143IUV_profile_pattern_5.n_303-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR000EVD_ChIP_ZNF263_HEK293_ENCSR143IUV_profile_pattern_6.n_269-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR000EVD_ChIP_ZNF263_HEK293_ENCSR143IUV_profile_pattern_7.n_227-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR000EVD_ChIP_ZNF263_HEK293_ENCSR143IUV_profile_pattern_8.n_214-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR000EVD_ChIP_ZNF263_HEK293_ENCSR143IUV_profile_pattern_9.n_155-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR000EWN_ChIP_ZNF263_K562_ENCSR229HUB_profile_pattern_0.n_230-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR000EWN_ChIP_ZNF263_K562_ENCSR229HUB_profile_pattern_1.n_83-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR000EWN_ChIP_ZNF263_K562_ENCSR229HUB_profile_pattern_2.n_35-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR000EWN_ChIP_ZNF263_K562_ENCSR229HUB_profile_pattern_3.n_23-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR156JWW_ChIP_ZNF263_WTC11_ENCSR162AVH_profile_pattern_0.n_62-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR156JWW_ChIP_ZNF263_WTC11_ENCSR162AVH_profile_pattern_1.n_49-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR156JWW_ChIP_ZNF263_WTC11_ENCSR162AVH_profile_pattern_2.n_46-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR156JWW_ChIP_ZNF263_WTC11_ENCSR162AVH_profile_pattern_3.n_44-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR156JWW_ChIP_ZNF263_WTC11_ENCSR162AVH_profile_pattern_4.n_38-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR313MMD_ChIP_ZNF263_HepG2_ENCSR197RBG_profile_pattern_0.n_1180-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR313MMD_ChIP_ZNF263_HepG2_ENCSR197RBG_profile_pattern_1.n_818-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR313MMD_ChIP_ZNF263_HepG2_ENCSR197RBG_profile_pattern_2.n_293-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR313MMD_ChIP_ZNF263_HepG2_ENCSR197RBG_profile_pattern_3.n_260-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR313MMD_ChIP_ZNF263_HepG2_ENCSR197RBG_profile_pattern_4.n_231-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR313MMD_ChIP_ZNF263_HepG2_ENCSR197RBG_profile_pattern_5.n_203-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR313MMD_ChIP_ZNF263_HepG2_ENCSR197RBG_profile_pattern_6.n_48-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR845GGY_ChIP_ZNF263_K562_ENCSR749YHO_profile_pattern_0.n_752-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR845GGY_ChIP_ZNF263_K562_ENCSR749YHO_profile_pattern_10.n_72-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR845GGY_ChIP_ZNF263_K562_ENCSR749YHO_profile_pattern_11.n_35-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR845GGY_ChIP_ZNF263_K562_ENCSR749YHO_profile_pattern_12.n_21-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR845GGY_ChIP_ZNF263_K562_ENCSR749YHO_profile_pattern_1.n_233-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR845GGY_ChIP_ZNF263_K562_ENCSR749YHO_profile_pattern_2.n_188-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR845GGY_ChIP_ZNF263_K562_ENCSR749YHO_profile_pattern_3.n_174-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR845GGY_ChIP_ZNF263_K562_ENCSR749YHO_profile_pattern_4.n_171-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR845GGY_ChIP_ZNF263_K562_ENCSR749YHO_profile_pattern_5.n_148-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR845GGY_ChIP_ZNF263_K562_ENCSR749YHO_profile_pattern_6.n_139-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR845GGY_ChIP_ZNF263_K562_ENCSR749YHO_profile_pattern_7.n_132-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR845GGY_ChIP_ZNF263_K562_ENCSR749YHO_profile_pattern_8.n_115-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/neg_patterns.ENCSR845GGY_ChIP_ZNF263_K562_ENCSR749YHO_profile_pattern_9.n_105-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR000EVD_ChIP_ZNF263_HEK293_ENCSR143IUV_profile_pattern_0.n_18390-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR000EVD_ChIP_ZNF263_HEK293_ENCSR143IUV_profile_pattern_1.n_3211-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR000EVD_ChIP_ZNF263_HEK293_ENCSR143IUV_profile_pattern_2.n_2806-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR000EVD_ChIP_ZNF263_HEK293_ENCSR143IUV_profile_pattern_3.n_1201-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR000EVD_ChIP_ZNF263_HEK293_ENCSR143IUV_profile_pattern_4.n_157-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR000EVD_ChIP_ZNF263_HEK293_ENCSR143IUV_profile_pattern_5.n_155-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR000EVD_ChIP_ZNF263_HEK293_ENCSR143IUV_profile_pattern_6.n_76-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR000EVD_ChIP_ZNF263_HEK293_ENCSR143IUV_profile_pattern_7.n_65-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR000EVD_ChIP_ZNF263_HEK293_ENCSR143IUV_profile_pattern_8.n_47-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR000EVD_ChIP_ZNF263_HEK293_ENCSR143IUV_profile_pattern_9.n_34-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR000EWN_ChIP_ZNF263_K562_ENCSR229HUB_profile_pattern_0.n_2826-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR000EWN_ChIP_ZNF263_K562_ENCSR229HUB_profile_pattern_10.n_49-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR000EWN_ChIP_ZNF263_K562_ENCSR229HUB_profile_pattern_11.n_42-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR000EWN_ChIP_ZNF263_K562_ENCSR229HUB_profile_pattern_12.n_22-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR000EWN_ChIP_ZNF263_K562_ENCSR229HUB_profile_pattern_1.n_693-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR000EWN_ChIP_ZNF263_K562_ENCSR229HUB_profile_pattern_2.n_401-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR000EWN_ChIP_ZNF263_K562_ENCSR229HUB_profile_pattern_3.n_286-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR000EWN_ChIP_ZNF263_K562_ENCSR229HUB_profile_pattern_4.n_275-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR000EWN_ChIP_ZNF263_K562_ENCSR229HUB_profile_pattern_5.n_233-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR000EWN_ChIP_ZNF263_K562_ENCSR229HUB_profile_pattern_6.n_136-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR000EWN_ChIP_ZNF263_K562_ENCSR229HUB_profile_pattern_7.n_118-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR000EWN_ChIP_ZNF263_K562_ENCSR229HUB_profile_pattern_8.n_84-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR000EWN_ChIP_ZNF263_K562_ENCSR229HUB_profile_pattern_9.n_60-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR156JWW_ChIP_ZNF263_WTC11_ENCSR162AVH_profile_pattern_0.n_3348-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR156JWW_ChIP_ZNF263_WTC11_ENCSR162AVH_profile_pattern_1.n_1480-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR156JWW_ChIP_ZNF263_WTC11_ENCSR162AVH_profile_pattern_2.n_308-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR156JWW_ChIP_ZNF263_WTC11_ENCSR162AVH_profile_pattern_3.n_224-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR156JWW_ChIP_ZNF263_WTC11_ENCSR162AVH_profile_pattern_4.n_117-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR156JWW_ChIP_ZNF263_WTC11_ENCSR162AVH_profile_pattern_5.n_56-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR156JWW_ChIP_ZNF263_WTC11_ENCSR162AVH_profile_pattern_6.n_56-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR156JWW_ChIP_ZNF263_WTC11_ENCSR162AVH_profile_pattern_7.n_53-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR156JWW_ChIP_ZNF263_WTC11_ENCSR162AVH_profile_pattern_8.n_34-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR156JWW_ChIP_ZNF263_WTC11_ENCSR162AVH_profile_pattern_9.n_29-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR313MMD_ChIP_ZNF263_HepG2_ENCSR197RBG_profile_pattern_0.n_11294-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR313MMD_ChIP_ZNF263_HepG2_ENCSR197RBG_profile_pattern_10.n_257-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR313MMD_ChIP_ZNF263_HepG2_ENCSR197RBG_profile_pattern_11.n_239-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR313MMD_ChIP_ZNF263_HepG2_ENCSR197RBG_profile_pattern_12.n_191-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR313MMD_ChIP_ZNF263_HepG2_ENCSR197RBG_profile_pattern_13.n_124-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR313MMD_ChIP_ZNF263_HepG2_ENCSR197RBG_profile_pattern_14.n_109-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR313MMD_ChIP_ZNF263_HepG2_ENCSR197RBG_profile_pattern_15.n_95-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR313MMD_ChIP_ZNF263_HepG2_ENCSR197RBG_profile_pattern_16.n_81-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR313MMD_ChIP_ZNF263_HepG2_ENCSR197RBG_profile_pattern_17.n_53-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR313MMD_ChIP_ZNF263_HepG2_ENCSR197RBG_profile_pattern_18.n_29-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR313MMD_ChIP_ZNF263_HepG2_ENCSR197RBG_profile_pattern_1.n_6535-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR313MMD_ChIP_ZNF263_HepG2_ENCSR197RBG_profile_pattern_2.n_3544-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR313MMD_ChIP_ZNF263_HepG2_ENCSR197RBG_profile_pattern_3.n_1503-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR313MMD_ChIP_ZNF263_HepG2_ENCSR197RBG_profile_pattern_4.n_1301-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR313MMD_ChIP_ZNF263_HepG2_ENCSR197RBG_profile_pattern_6.n_727-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR313MMD_ChIP_ZNF263_HepG2_ENCSR197RBG_profile_pattern_7.n_398-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR313MMD_ChIP_ZNF263_HepG2_ENCSR197RBG_profile_pattern_9.n_313-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR845GGY_ChIP_ZNF263_K562_ENCSR749YHO_profile_pattern_14.n_79-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR845GGY_ChIP_ZNF263_K562_ENCSR749YHO_profile_pattern_16.n_66-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR845GGY_ChIP_ZNF263_K562_ENCSR749YHO_profile_pattern_17.n_55-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR845GGY_ChIP_ZNF263_K562_ENCSR749YHO_profile_pattern_18.n_46-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR845GGY_ChIP_ZNF263_K562_ENCSR749YHO_profile_pattern_19.n_42-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR845GGY_ChIP_ZNF263_K562_ENCSR749YHO_profile_pattern_1.n_3704-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR845GGY_ChIP_ZNF263_K562_ENCSR749YHO_profile_pattern_2.n_1376-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR845GGY_ChIP_ZNF263_K562_ENCSR749YHO_profile_pattern_3.n_691-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR845GGY_ChIP_ZNF263_K562_ENCSR749YHO_profile_pattern_4.n_569-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR845GGY_ChIP_ZNF263_K562_ENCSR749YHO_profile_pattern_5.n_451-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR845GGY_ChIP_ZNF263_K562_ENCSR749YHO_profile_pattern_6.n_390-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR845GGY_ChIP_ZNF263_K562_ENCSR749YHO_profile_pattern_7.n_324-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR845GGY_ChIP_ZNF263_K562_ENCSR749YHO_profile_pattern_8.n_322-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF263-201/pos_patterns.ENCSR845GGY_ChIP_ZNF263_K562_ENCSR749YHO_profile_pattern_9.n_241-vs-ZNF263-201.alignment profile-znf_b1h_alignment/ZNF263-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF264-201/ChipExo_models_ZNF264_profile-pos.pattern_0.n_94-vs-ZNF264-201.alignment profile-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF264-201/ChipExo_models_ZNF264_profile-pos.pattern_1.n_52-vs-ZNF264-201.alignment profile-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF264-201/ChipExo_models_ZNF264_profile-pos.pattern_2.n_48-vs-ZNF264-201.alignment profile-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF264-201/ChipExo_models_ZNF264_profile-pos.pattern_3.n_42-vs-ZNF264-201.alignment profile-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF264-201/ChipExo_models_ZNF264_profile-pos.pattern_4.n_40-vs-ZNF264-201.alignment profile-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF264-201/ChipExo_models_ZNF264_profile-pos.pattern_5.n_32-vs-ZNF264-201.alignment profile-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF264-201/ChipExo_models_ZNF264_profile-pos.pattern_6.n_22-vs-ZNF264-201.alignment profile-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF264-201/Hughes_GR_models_ZNF264_profile-pos.pattern_0.n_219-vs-ZNF264-201.alignment profile-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF264-201/Hughes_GR_models_ZNF264_profile-pos.pattern_1.n_170-vs-ZNF264-201.alignment profile-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF264-201/Hughes_GR_models_ZNF264_profile-pos.pattern_2.n_111-vs-ZNF264-201.alignment profile-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF264-201/Hughes_GR_models_ZNF264_profile-pos.pattern_3.n_44-vs-ZNF264-201.alignment profile-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF264-201/Hughes_GR_models_ZNF264_profile-pos.pattern_4.n_20-vs-ZNF264-201.alignment profile-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF264-201/Hughes_NB_models_ZNF264_profile-pos.pattern_0.n_1636-vs-ZNF264-201.alignment profile-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF264-201/Hughes_NB_models_ZNF264_profile-pos.pattern_1.n_864-vs-ZNF264-201.alignment profile-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF264-201/Hughes_NB_models_ZNF264_profile-pos.pattern_2.n_422-vs-ZNF264-201.alignment profile-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF264-201/Hughes_NB_models_ZNF264_profile-pos.pattern_3.n_353-vs-ZNF264-201.alignment profile-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF264-201/Hughes_NB_models_ZNF264_profile-pos.pattern_4.n_106-vs-ZNF264-201.alignment profile-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF264-201/Hughes_NB_models_ZNF264_profile-pos.pattern_5.n_36-vs-ZNF264-201.alignment profile-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF264-201/neg_patterns.ENCSR248BVU_ChIP_ZNF264_HepG2_ENCSR020DMV_profile_pattern_0.n_89-vs-ZNF264-201.alignment profile-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF264-201/neg_patterns.ENCSR248BVU_ChIP_ZNF264_HepG2_ENCSR020DMV_profile_pattern_10.n_21-vs-ZNF264-201.alignment profile-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF264-201/neg_patterns.ENCSR248BVU_ChIP_ZNF264_HepG2_ENCSR020DMV_profile_pattern_1.n_75-vs-ZNF264-201.alignment profile-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF264-201/neg_patterns.ENCSR248BVU_ChIP_ZNF264_HepG2_ENCSR020DMV_profile_pattern_2.n_73-vs-ZNF264-201.alignment profile-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF264-201/neg_patterns.ENCSR248BVU_ChIP_ZNF264_HepG2_ENCSR020DMV_profile_pattern_3.n_72-vs-ZNF264-201.alignment profile-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF264-201/neg_patterns.ENCSR248BVU_ChIP_ZNF264_HepG2_ENCSR020DMV_profile_pattern_4.n_72-vs-ZNF264-201.alignment profile-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF264-201/neg_patterns.ENCSR248BVU_ChIP_ZNF264_HepG2_ENCSR020DMV_profile_pattern_5.n_49-vs-ZNF264-201.alignment profile-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF264-201/neg_patterns.ENCSR248BVU_ChIP_ZNF264_HepG2_ENCSR020DMV_profile_pattern_6.n_34-vs-ZNF264-201.alignment profile-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF264-201/neg_patterns.ENCSR248BVU_ChIP_ZNF264_HepG2_ENCSR020DMV_profile_pattern_7.n_28-vs-ZNF264-201.alignment profile-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF264-201/neg_patterns.ENCSR248BVU_ChIP_ZNF264_HepG2_ENCSR020DMV_profile_pattern_8.n_24-vs-ZNF264-201.alignment profile-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF264-201/neg_patterns.ENCSR248BVU_ChIP_ZNF264_HepG2_ENCSR020DMV_profile_pattern_9.n_22-vs-ZNF264-201.alignment profile-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF264-201/pos_patterns.ENCSR248BVU_ChIP_ZNF264_HepG2_ENCSR020DMV_profile_pattern_0.n_3918-vs-ZNF264-201.alignment profile-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF264-201/pos_patterns.ENCSR248BVU_ChIP_ZNF264_HepG2_ENCSR020DMV_profile_pattern_10.n_312-vs-ZNF264-201.alignment profile-znf_b1h_alignment/ZNF264-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF264-201/pos_patterns.ENCSR248BVU_ChIP_ZNF264_HepG2_ENCSR020DMV_profile_pattern_8.n_403-vs-ZNF264-201.alignment profile-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF264-201/pos_patterns.ENCSR248BVU_ChIP_ZNF264_HepG2_ENCSR020DMV_profile_pattern_9.n_337-vs-ZNF264-201.alignment profile-znf_b1h_alignment/ZNF264-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF266-202/ChipExo_models_ZNF266_profile-pos.pattern_0.n_1367-vs-ZNF266-202.alignment profile-znf_b1h_alignment/ZNF266-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF266-202/ChipExo_models_ZNF266_profile-pos.pattern_1.n_98-vs-ZNF266-202.alignment profile-znf_b1h_alignment/ZNF266-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF266-202/pos_patterns.ENCSR466VYP_ChIP_ZNF266_HEK293_ENCSR521XAG_profile_pattern_0.n_3351-vs-ZNF266-202.alignment profile-znf_b1h_alignment/ZNF266-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF266-202/pos_patterns.ENCSR466VYP_ChIP_ZNF266_HEK293_ENCSR521XAG_profile_pattern_10.n_23-vs-ZNF266-202.alignment profile-znf_b1h_alignment/ZNF266-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF266-202/pos_patterns.ENCSR466VYP_ChIP_ZNF266_HEK293_ENCSR521XAG_profile_pattern_1.n_685-vs-ZNF266-202.alignment profile-znf_b1h_alignment/ZNF266-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF266-202/pos_patterns.ENCSR466VYP_ChIP_ZNF266_HEK293_ENCSR521XAG_profile_pattern_2.n_679-vs-ZNF266-202.alignment profile-znf_b1h_alignment/ZNF266-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF266-202/pos_patterns.ENCSR466VYP_ChIP_ZNF266_HEK293_ENCSR521XAG_profile_pattern_3.n_443-vs-ZNF266-202.alignment profile-znf_b1h_alignment/ZNF266-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF266-202/pos_patterns.ENCSR466VYP_ChIP_ZNF266_HEK293_ENCSR521XAG_profile_pattern_4.n_254-vs-ZNF266-202.alignment profile-znf_b1h_alignment/ZNF266-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF266-202/pos_patterns.ENCSR466VYP_ChIP_ZNF266_HEK293_ENCSR521XAG_profile_pattern_5.n_76-vs-ZNF266-202.alignment profile-znf_b1h_alignment/ZNF266-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF266-202/pos_patterns.ENCSR466VYP_ChIP_ZNF266_HEK293_ENCSR521XAG_profile_pattern_6.n_70-vs-ZNF266-202.alignment profile-znf_b1h_alignment/ZNF266-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF266-202/pos_patterns.ENCSR466VYP_ChIP_ZNF266_HEK293_ENCSR521XAG_profile_pattern_7.n_66-vs-ZNF266-202.alignment profile-znf_b1h_alignment/ZNF266-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF266-202/pos_patterns.ENCSR466VYP_ChIP_ZNF266_HEK293_ENCSR521XAG_profile_pattern_8.n_46-vs-ZNF266-202.alignment profile-znf_b1h_alignment/ZNF266-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF266-202/pos_patterns.ENCSR466VYP_ChIP_ZNF266_HEK293_ENCSR521XAG_profile_pattern_9.n_37-vs-ZNF266-202.alignment profile-znf_b1h_alignment/ZNF266-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF267-201/ChipExo_models_ZNF267_profile-pos.pattern_0.n_810-vs-ZNF267-201.alignment profile-znf_b1h_alignment/ZNF267-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF267-201/ChipExo_models_ZNF267_profile-pos.pattern_1.n_94-vs-ZNF267-201.alignment profile-znf_b1h_alignment/ZNF267-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF267-201/ChipExo_models_ZNF267_profile-pos.pattern_2.n_70-vs-ZNF267-201.alignment profile-znf_b1h_alignment/ZNF267-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF267-201/ChipExo_models_ZNF267_profile-pos.pattern_3.n_66-vs-ZNF267-201.alignment profile-znf_b1h_alignment/ZNF267-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF267-201/ChipExo_models_ZNF267_profile-pos.pattern_4.n_61-vs-ZNF267-201.alignment profile-znf_b1h_alignment/ZNF267-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF267-201/ChipExo_models_ZNF267_profile-pos.pattern_5.n_28-vs-ZNF267-201.alignment profile-znf_b1h_alignment/ZNF267-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF267-206/ChipExo_models_ZNF267_profile-pos.pattern_0.n_810-vs-ZNF267-206.alignment profile-znf_b1h_alignment/ZNF267-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF267-206/ChipExo_models_ZNF267_profile-pos.pattern_1.n_94-vs-ZNF267-206.alignment profile-znf_b1h_alignment/ZNF267-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF267-206/ChipExo_models_ZNF267_profile-pos.pattern_2.n_70-vs-ZNF267-206.alignment profile-znf_b1h_alignment/ZNF267-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF267-206/ChipExo_models_ZNF267_profile-pos.pattern_3.n_66-vs-ZNF267-206.alignment profile-znf_b1h_alignment/ZNF267-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF267-206/ChipExo_models_ZNF267_profile-pos.pattern_4.n_61-vs-ZNF267-206.alignment profile-znf_b1h_alignment/ZNF267-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF267-206/ChipExo_models_ZNF267_profile-pos.pattern_5.n_28-vs-ZNF267-206.alignment profile-znf_b1h_alignment/ZNF267-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF273-201/ChipExo_models_ZNF273_profile-pos.pattern_0.n_4368-vs-ZNF273-201.alignment profile-znf_b1h_alignment/ZNF273-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF273-201/ChipExo_models_ZNF273_profile-pos.pattern_1.n_2011-vs-ZNF273-201.alignment profile-znf_b1h_alignment/ZNF273-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF273-201/ChipExo_models_ZNF273_profile-pos.pattern_2.n_1342-vs-ZNF273-201.alignment profile-znf_b1h_alignment/ZNF273-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF273-201/Hughes_NB_models_ZNF273_profile-pos.pattern_5.n_39-vs-ZNF273-201.alignment profile-znf_b1h_alignment/ZNF273-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/ChipExo_models_ZNF274_profile-pos.pattern_0.n_836-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/ChipExo_models_ZNF274_profile-pos.pattern_1.n_137-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/ChipExo_models_ZNF274_profile-pos.pattern_2.n_90-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/ChipExo_models_ZNF274_profile-pos.pattern_3.n_48-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/neg_patterns.ENCSR000EUN_ChIP_ZNF274_H1_ENCSR912JCS_profile_pattern_0.n_178-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/neg_patterns.ENCSR000EUN_ChIP_ZNF274_H1_ENCSR912JCS_profile_pattern_1.n_28-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/neg_patterns.ENCSR000EUN_ChIP_ZNF274_H1_ENCSR912JCS_profile_pattern_2.n_20-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/neg_patterns.ENCSR000EVG_ChIP_ZNF274_HeLa-S3_ENCSR280NEV_profile_pattern_0.n_72-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/neg_patterns.ENCSR000EVG_ChIP_ZNF274_HeLa-S3_ENCSR280NEV_profile_pattern_1.n_25-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/neg_patterns.ENCSR000EVG_ChIP_ZNF274_HeLa-S3_ENCSR280NEV_profile_pattern_2.n_24-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/neg_patterns.ENCSR000EVG_ChIP_ZNF274_HeLa-S3_ENCSR280NEV_profile_pattern_3.n_20-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/neg_patterns.ENCSR000EVR_ChIP_ZNF274_HepG2_ENCSR275IXE_profile_pattern_0.n_27-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/neg_patterns.ENCSR000EVX_ChIP_ZNF274_K562_ENCSR253FIG_profile_pattern_0.n_62-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/neg_patterns.ENCSR000EVX_ChIP_ZNF274_K562_ENCSR253FIG_profile_pattern_1.n_49-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/neg_patterns.ENCSR101FJM_ChIP_ZNF274_HCT116_ENCSR079PXR_profile_pattern_0.n_76-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/neg_patterns.ENCSR101FJM_ChIP_ZNF274_HCT116_ENCSR079PXR_profile_pattern_1.n_37-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/neg_patterns.ENCSR101FJM_ChIP_ZNF274_HCT116_ENCSR079PXR_profile_pattern_2.n_33-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/neg_patterns.ENCSR101FJM_ChIP_ZNF274_HCT116_ENCSR079PXR_profile_pattern_3.n_28-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/neg_patterns.ENCSR101FJM_ChIP_ZNF274_HCT116_ENCSR079PXR_profile_pattern_4.n_21-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/neg_patterns.ENCSR178QVJ_ChIP_ZNF274_HEK293_ENCSR804PIO_profile_pattern_0.n_47-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/neg_patterns.ENCSR178QVJ_ChIP_ZNF274_HEK293_ENCSR804PIO_profile_pattern_1.n_23-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/neg_patterns.ENCSR871VNN_ChIP_ZNF274_HepG2_ENCSR449NSD_profile_pattern_0.n_195-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/neg_patterns.ENCSR871VNN_ChIP_ZNF274_HepG2_ENCSR449NSD_profile_pattern_1.n_33-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/neg_patterns.ENCSR871VNN_ChIP_ZNF274_HepG2_ENCSR449NSD_profile_pattern_2.n_24-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EUI_ChIP_ZNF274_GM08714_ENCSR982WSU_profile_pattern_0.n_313-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EUI_ChIP_ZNF274_GM08714_ENCSR982WSU_profile_pattern_1.n_175-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EUI_ChIP_ZNF274_GM08714_ENCSR982WSU_profile_pattern_2.n_135-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EUI_ChIP_ZNF274_GM08714_ENCSR982WSU_profile_pattern_3.n_87-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EUI_ChIP_ZNF274_GM08714_ENCSR982WSU_profile_pattern_4.n_62-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EUI_ChIP_ZNF274_GM08714_ENCSR982WSU_profile_pattern_5.n_42-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EUI_ChIP_ZNF274_GM08714_ENCSR982WSU_profile_pattern_6.n_20-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EUK_ChIP_ZNF274_GM12878_ENCSR822JGM_profile_pattern_0.n_232-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EUK_ChIP_ZNF274_GM12878_ENCSR822JGM_profile_pattern_1.n_27-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EUN_ChIP_ZNF274_H1_ENCSR912JCS_profile_pattern_0.n_1721-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EUN_ChIP_ZNF274_H1_ENCSR912JCS_profile_pattern_1.n_65-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EVG_ChIP_ZNF274_HeLa-S3_ENCSR280NEV_profile_pattern_0.n_399-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EVG_ChIP_ZNF274_HeLa-S3_ENCSR280NEV_profile_pattern_1.n_219-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EVG_ChIP_ZNF274_HeLa-S3_ENCSR280NEV_profile_pattern_2.n_61-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EVG_ChIP_ZNF274_HeLa-S3_ENCSR280NEV_profile_pattern_3.n_45-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EVG_ChIP_ZNF274_HeLa-S3_ENCSR280NEV_profile_pattern_4.n_44-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EVR_ChIP_ZNF274_HepG2_ENCSR275IXE_profile_pattern_0.n_478-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EVR_ChIP_ZNF274_HepG2_ENCSR275IXE_profile_pattern_1.n_71-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EVR_ChIP_ZNF274_HepG2_ENCSR275IXE_profile_pattern_2.n_26-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EVX_ChIP_ZNF274_K562_ENCSR253FIG_profile_pattern_0.n_991-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EVX_ChIP_ZNF274_K562_ENCSR253FIG_profile_pattern_1.n_212-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EVX_ChIP_ZNF274_K562_ENCSR253FIG_profile_pattern_2.n_204-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EVX_ChIP_ZNF274_K562_ENCSR253FIG_profile_pattern_3.n_68-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EVX_ChIP_ZNF274_K562_ENCSR253FIG_profile_pattern_4.n_48-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EVX_ChIP_ZNF274_K562_ENCSR253FIG_profile_pattern_5.n_41-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EWE_ChIP_ZNF274_K562_ENCSR045QEV_profile_pattern_0.n_291-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EWE_ChIP_ZNF274_K562_ENCSR045QEV_profile_pattern_1.n_39-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EWY_ChIP_ZNF274_NT2_D1_ENCSR821NQF_profile_pattern_0.n_839-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EWY_ChIP_ZNF274_NT2_D1_ENCSR821NQF_profile_pattern_1.n_324-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EWY_ChIP_ZNF274_NT2_D1_ENCSR821NQF_profile_pattern_2.n_121-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EWY_ChIP_ZNF274_NT2_D1_ENCSR821NQF_profile_pattern_3.n_70-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EWY_ChIP_ZNF274_NT2_D1_ENCSR821NQF_profile_pattern_4.n_59-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000EWY_ChIP_ZNF274_NT2_D1_ENCSR821NQF_profile_pattern_5.n_51-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000FCI_ChIP_ZNF274_HEK293_ENCSR469PPH_profile_pattern_0.n_164-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000FCI_ChIP_ZNF274_HEK293_ENCSR469PPH_profile_pattern_1.n_68-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR000FCI_ChIP_ZNF274_HEK293_ENCSR469PPH_profile_pattern_2.n_43-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR871VNN_ChIP_ZNF274_HepG2_ENCSR449NSD_profile_pattern_14.n_59-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR871VNN_ChIP_ZNF274_HepG2_ENCSR449NSD_profile_pattern_1.n_1586-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR871VNN_ChIP_ZNF274_HepG2_ENCSR449NSD_profile_pattern_2.n_1554-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR871VNN_ChIP_ZNF274_HepG2_ENCSR449NSD_profile_pattern_3.n_1167-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR871VNN_ChIP_ZNF274_HepG2_ENCSR449NSD_profile_pattern_4.n_1072-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR871VNN_ChIP_ZNF274_HepG2_ENCSR449NSD_profile_pattern_5.n_500-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR871VNN_ChIP_ZNF274_HepG2_ENCSR449NSD_profile_pattern_6.n_387-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR871VNN_ChIP_ZNF274_HepG2_ENCSR449NSD_profile_pattern_7.n_325-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR871VNN_ChIP_ZNF274_HepG2_ENCSR449NSD_profile_pattern_8.n_244-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF274-201/pos_patterns.ENCSR871VNN_ChIP_ZNF274_HepG2_ENCSR449NSD_profile_pattern_9.n_236-vs-ZNF274-201.alignment profile-znf_b1h_alignment/ZNF274-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF275-201/neg_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_profile_pattern_0.n_57-vs-ZNF275-201.alignment profile-znf_b1h_alignment/ZNF275-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF275-201/neg_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_profile_pattern_1.n_57-vs-ZNF275-201.alignment profile-znf_b1h_alignment/ZNF275-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF275-201/neg_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_profile_pattern_2.n_55-vs-ZNF275-201.alignment profile-znf_b1h_alignment/ZNF275-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF275-201/neg_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_profile_pattern_3.n_32-vs-ZNF275-201.alignment profile-znf_b1h_alignment/ZNF275-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF275-201/neg_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_profile_pattern_4.n_22-vs-ZNF275-201.alignment profile-znf_b1h_alignment/ZNF275-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF275-201/neg_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_profile_pattern_5.n_20-vs-ZNF275-201.alignment profile-znf_b1h_alignment/ZNF275-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF275-201/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_profile_pattern_0.n_1999-vs-ZNF275-201.alignment profile-znf_b1h_alignment/ZNF275-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF275-201/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_profile_pattern_10.n_197-vs-ZNF275-201.alignment profile-znf_b1h_alignment/ZNF275-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF275-201/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_profile_pattern_11.n_157-vs-ZNF275-201.alignment profile-znf_b1h_alignment/ZNF275-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF275-201/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_profile_pattern_12.n_146-vs-ZNF275-201.alignment profile-znf_b1h_alignment/ZNF275-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF275-201/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_profile_pattern_13.n_127-vs-ZNF275-201.alignment profile-znf_b1h_alignment/ZNF275-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF275-201/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_profile_pattern_14.n_114-vs-ZNF275-201.alignment profile-znf_b1h_alignment/ZNF275-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF275-201/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_profile_pattern_15.n_66-vs-ZNF275-201.alignment profile-znf_b1h_alignment/ZNF275-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF275-201/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_profile_pattern_16.n_54-vs-ZNF275-201.alignment profile-znf_b1h_alignment/ZNF275-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF275-201/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_profile_pattern_17.n_50-vs-ZNF275-201.alignment profile-znf_b1h_alignment/ZNF275-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF275-201/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_profile_pattern_18.n_46-vs-ZNF275-201.alignment profile-znf_b1h_alignment/ZNF275-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF275-201/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_profile_pattern_19.n_43-vs-ZNF275-201.alignment profile-znf_b1h_alignment/ZNF275-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF275-201/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_profile_pattern_1.n_1384-vs-ZNF275-201.alignment profile-znf_b1h_alignment/ZNF275-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF275-201/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_profile_pattern_20.n_26-vs-ZNF275-201.alignment profile-znf_b1h_alignment/ZNF275-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF275-201/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_profile_pattern_21.n_21-vs-ZNF275-201.alignment profile-znf_b1h_alignment/ZNF275-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF275-201/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_profile_pattern_2.n_722-vs-ZNF275-201.alignment profile-znf_b1h_alignment/ZNF275-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF275-201/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_profile_pattern_3.n_410-vs-ZNF275-201.alignment profile-znf_b1h_alignment/ZNF275-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF275-201/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_profile_pattern_4.n_401-vs-ZNF275-201.alignment profile-znf_b1h_alignment/ZNF275-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF275-201/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_profile_pattern_6.n_277-vs-ZNF275-201.alignment profile-znf_b1h_alignment/ZNF275-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF275-202/pos_patterns.ENCSR590BHJ_ChIP_ZNF275_HepG2_ENCSR215LYW_profile_pattern_9.n_198-vs-ZNF275-202.alignment profile-znf_b1h_alignment/ZNF275-202/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF276-201/neg_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_profile_pattern_2.n_64-vs-ZNF276-201.alignment profile-znf_b1h_alignment/ZNF276-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF276-201/neg_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_profile_pattern_3.n_32-vs-ZNF276-201.alignment profile-znf_b1h_alignment/ZNF276-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF276-201/neg_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_profile_pattern_6.n_30-vs-ZNF276-201.alignment profile-znf_b1h_alignment/ZNF276-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF276-201/neg_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_profile_pattern_7.n_28-vs-ZNF276-201.alignment profile-znf_b1h_alignment/ZNF276-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF276-201/neg_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_profile_pattern_8.n_26-vs-ZNF276-201.alignment profile-znf_b1h_alignment/ZNF276-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF276-201/neg_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_profile_pattern_9.n_25-vs-ZNF276-201.alignment profile-znf_b1h_alignment/ZNF276-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF276-201/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_profile_pattern_0.n_3962-vs-ZNF276-201.alignment profile-znf_b1h_alignment/ZNF276-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF276-201/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_profile_pattern_1.n_1786-vs-ZNF276-201.alignment profile-znf_b1h_alignment/ZNF276-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF276-201/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_profile_pattern_2.n_521-vs-ZNF276-201.alignment profile-znf_b1h_alignment/ZNF276-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF276-204/neg_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_profile_pattern_0.n_67-vs-ZNF276-204.alignment profile-znf_b1h_alignment/ZNF276-204/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF276-206/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_profile_pattern_0.n_3962-vs-ZNF276-206.alignment profile-znf_b1h_alignment/ZNF276-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF276-206/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_profile_pattern_1.n_1786-vs-ZNF276-206.alignment profile-znf_b1h_alignment/ZNF276-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF276-206/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_profile_pattern_2.n_521-vs-ZNF276-206.alignment profile-znf_b1h_alignment/ZNF276-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF276-206/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_profile_pattern_3.n_226-vs-ZNF276-206.alignment profile-znf_b1h_alignment/ZNF276-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF276-206/pos_patterns.ENCSR076KLJ_ChIP_ZNF276_HepG2_ENCSR734DSY_profile_pattern_4.n_206-vs-ZNF276-206.alignment profile-znf_b1h_alignment/ZNF276-206/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF277-201/neg_patterns.ENCSR358PJI_ChIP_ZNF277_K562_ENCSR912JZA_profile_pattern_0.n_55-vs-ZNF277-201.alignment profile-znf_b1h_alignment/ZNF277-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF277-201/neg_patterns.ENCSR358PJI_ChIP_ZNF277_K562_ENCSR912JZA_profile_pattern_1.n_53-vs-ZNF277-201.alignment profile-znf_b1h_alignment/ZNF277-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF277-201/neg_patterns.ENCSR358PJI_ChIP_ZNF277_K562_ENCSR912JZA_profile_pattern_2.n_50-vs-ZNF277-201.alignment profile-znf_b1h_alignment/ZNF277-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF277-201/neg_patterns.ENCSR358PJI_ChIP_ZNF277_K562_ENCSR912JZA_profile_pattern_3.n_47-vs-ZNF277-201.alignment profile-znf_b1h_alignment/ZNF277-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF277-201/neg_patterns.ENCSR358PJI_ChIP_ZNF277_K562_ENCSR912JZA_profile_pattern_4.n_37-vs-ZNF277-201.alignment profile-znf_b1h_alignment/ZNF277-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF277-201/neg_patterns.ENCSR358PJI_ChIP_ZNF277_K562_ENCSR912JZA_profile_pattern_5.n_24-vs-ZNF277-201.alignment profile-znf_b1h_alignment/ZNF277-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF277-201/pos_patterns.ENCSR358PJI_ChIP_ZNF277_K562_ENCSR912JZA_profile_pattern_0.n_2151-vs-ZNF277-201.alignment profile-znf_b1h_alignment/ZNF277-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF277-201/pos_patterns.ENCSR358PJI_ChIP_ZNF277_K562_ENCSR912JZA_profile_pattern_10.n_29-vs-ZNF277-201.alignment profile-znf_b1h_alignment/ZNF277-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF277-201/pos_patterns.ENCSR358PJI_ChIP_ZNF277_K562_ENCSR912JZA_profile_pattern_11.n_27-vs-ZNF277-201.alignment profile-znf_b1h_alignment/ZNF277-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF277-201/pos_patterns.ENCSR358PJI_ChIP_ZNF277_K562_ENCSR912JZA_profile_pattern_1.n_139-vs-ZNF277-201.alignment profile-znf_b1h_alignment/ZNF277-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF277-201/pos_patterns.ENCSR358PJI_ChIP_ZNF277_K562_ENCSR912JZA_profile_pattern_2.n_135-vs-ZNF277-201.alignment profile-znf_b1h_alignment/ZNF277-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF277-201/pos_patterns.ENCSR358PJI_ChIP_ZNF277_K562_ENCSR912JZA_profile_pattern_3.n_95-vs-ZNF277-201.alignment profile-znf_b1h_alignment/ZNF277-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF277-201/pos_patterns.ENCSR358PJI_ChIP_ZNF277_K562_ENCSR912JZA_profile_pattern_4.n_91-vs-ZNF277-201.alignment profile-znf_b1h_alignment/ZNF277-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF277-201/pos_patterns.ENCSR358PJI_ChIP_ZNF277_K562_ENCSR912JZA_profile_pattern_5.n_72-vs-ZNF277-201.alignment profile-znf_b1h_alignment/ZNF277-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF277-201/pos_patterns.ENCSR358PJI_ChIP_ZNF277_K562_ENCSR912JZA_profile_pattern_6.n_61-vs-ZNF277-201.alignment profile-znf_b1h_alignment/ZNF277-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF277-201/pos_patterns.ENCSR358PJI_ChIP_ZNF277_K562_ENCSR912JZA_profile_pattern_7.n_54-vs-ZNF277-201.alignment profile-znf_b1h_alignment/ZNF277-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF277-201/pos_patterns.ENCSR358PJI_ChIP_ZNF277_K562_ENCSR912JZA_profile_pattern_8.n_50-vs-ZNF277-201.alignment profile-znf_b1h_alignment/ZNF277-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF277-201/pos_patterns.ENCSR358PJI_ChIP_ZNF277_K562_ENCSR912JZA_profile_pattern_9.n_47-vs-ZNF277-201.alignment profile-znf_b1h_alignment/ZNF277-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF277-202/neg_patterns.ENCSR358PJI_ChIP_ZNF277_K562_ENCSR912JZA_profile_pattern_0.n_55-vs-ZNF277-202.alignment profile-znf_b1h_alignment/ZNF277-202/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF277-202/neg_patterns.ENCSR358PJI_ChIP_ZNF277_K562_ENCSR912JZA_profile_pattern_2.n_50-vs-ZNF277-202.alignment profile-znf_b1h_alignment/ZNF277-202/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF281-201/neg_patterns.ENCSR403MJY_ChIP_ZNF281_HepG2_ENCSR712WOB_profile_pattern_1.n_39-vs-ZNF281-201.alignment profile-znf_b1h_alignment/ZNF281-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR032DGZ_ChIP_ZNF281_WTC11_ENCSR699TVO_profile_pattern_0.n_1902-vs-ZNF281-201.alignment profile-znf_b1h_alignment/ZNF281-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR032DGZ_ChIP_ZNF281_WTC11_ENCSR699TVO_profile_pattern_10.n_34-vs-ZNF281-201.alignment profile-znf_b1h_alignment/ZNF281-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR032DGZ_ChIP_ZNF281_WTC11_ENCSR699TVO_profile_pattern_11.n_30-vs-ZNF281-201.alignment profile-znf_b1h_alignment/ZNF281-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR032DGZ_ChIP_ZNF281_WTC11_ENCSR699TVO_profile_pattern_1.n_594-vs-ZNF281-201.alignment profile-znf_b1h_alignment/ZNF281-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR032DGZ_ChIP_ZNF281_WTC11_ENCSR699TVO_profile_pattern_2.n_390-vs-ZNF281-201.alignment profile-znf_b1h_alignment/ZNF281-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR032DGZ_ChIP_ZNF281_WTC11_ENCSR699TVO_profile_pattern_3.n_295-vs-ZNF281-201.alignment profile-znf_b1h_alignment/ZNF281-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR032DGZ_ChIP_ZNF281_WTC11_ENCSR699TVO_profile_pattern_4.n_226-vs-ZNF281-201.alignment profile-znf_b1h_alignment/ZNF281-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR032DGZ_ChIP_ZNF281_WTC11_ENCSR699TVO_profile_pattern_9.n_48-vs-ZNF281-201.alignment profile-znf_b1h_alignment/ZNF281-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR214EKV_ChIP_ZNF281_K562_ENCSR537AXI_profile_pattern_0.n_9749-vs-ZNF281-201.alignment profile-znf_b1h_alignment/ZNF281-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR214EKV_ChIP_ZNF281_K562_ENCSR537AXI_profile_pattern_10.n_127-vs-ZNF281-201.alignment profile-znf_b1h_alignment/ZNF281-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR214EKV_ChIP_ZNF281_K562_ENCSR537AXI_profile_pattern_11.n_124-vs-ZNF281-201.alignment profile-znf_b1h_alignment/ZNF281-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR214EKV_ChIP_ZNF281_K562_ENCSR537AXI_profile_pattern_13.n_94-vs-ZNF281-201.alignment profile-znf_b1h_alignment/ZNF281-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR214EKV_ChIP_ZNF281_K562_ENCSR537AXI_profile_pattern_15.n_81-vs-ZNF281-201.alignment profile-znf_b1h_alignment/ZNF281-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR214EKV_ChIP_ZNF281_K562_ENCSR537AXI_profile_pattern_16.n_77-vs-ZNF281-201.alignment profile-znf_b1h_alignment/ZNF281-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR214EKV_ChIP_ZNF281_K562_ENCSR537AXI_profile_pattern_19.n_59-vs-ZNF281-201.alignment profile-znf_b1h_alignment/ZNF281-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR214EKV_ChIP_ZNF281_K562_ENCSR537AXI_profile_pattern_5.n_528-vs-ZNF281-201.alignment profile-znf_b1h_alignment/ZNF281-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR214EKV_ChIP_ZNF281_K562_ENCSR537AXI_profile_pattern_6.n_454-vs-ZNF281-201.alignment profile-znf_b1h_alignment/ZNF281-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR214EKV_ChIP_ZNF281_K562_ENCSR537AXI_profile_pattern_7.n_330-vs-ZNF281-201.alignment profile-znf_b1h_alignment/ZNF281-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR214EKV_ChIP_ZNF281_K562_ENCSR537AXI_profile_pattern_8.n_235-vs-ZNF281-201.alignment profile-znf_b1h_alignment/ZNF281-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR214EKV_ChIP_ZNF281_K562_ENCSR537AXI_profile_pattern_9.n_214-vs-ZNF281-201.alignment profile-znf_b1h_alignment/ZNF281-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR403MJY_ChIP_ZNF281_HepG2_ENCSR712WOB_profile_pattern_0.n_8073-vs-ZNF281-201.alignment profile-znf_b1h_alignment/ZNF281-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR403MJY_ChIP_ZNF281_HepG2_ENCSR712WOB_profile_pattern_10.n_149-vs-ZNF281-201.alignment profile-znf_b1h_alignment/ZNF281-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR403MJY_ChIP_ZNF281_HepG2_ENCSR712WOB_profile_pattern_11.n_137-vs-ZNF281-201.alignment profile-znf_b1h_alignment/ZNF281-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR403MJY_ChIP_ZNF281_HepG2_ENCSR712WOB_profile_pattern_12.n_130-vs-ZNF281-201.alignment profile-znf_b1h_alignment/ZNF281-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR403MJY_ChIP_ZNF281_HepG2_ENCSR712WOB_profile_pattern_13.n_102-vs-ZNF281-201.alignment profile-znf_b1h_alignment/ZNF281-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR403MJY_ChIP_ZNF281_HepG2_ENCSR712WOB_profile_pattern_14.n_97-vs-ZNF281-201.alignment profile-znf_b1h_alignment/ZNF281-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR403MJY_ChIP_ZNF281_HepG2_ENCSR712WOB_profile_pattern_15.n_62-vs-ZNF281-201.alignment profile-znf_b1h_alignment/ZNF281-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR403MJY_ChIP_ZNF281_HepG2_ENCSR712WOB_profile_pattern_16.n_58-vs-ZNF281-201.alignment profile-znf_b1h_alignment/ZNF281-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR403MJY_ChIP_ZNF281_HepG2_ENCSR712WOB_profile_pattern_17.n_57-vs-ZNF281-201.alignment profile-znf_b1h_alignment/ZNF281-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR403MJY_ChIP_ZNF281_HepG2_ENCSR712WOB_profile_pattern_18.n_52-vs-ZNF281-201.alignment profile-znf_b1h_alignment/ZNF281-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR403MJY_ChIP_ZNF281_HepG2_ENCSR712WOB_profile_pattern_19.n_48-vs-ZNF281-201.alignment profile-znf_b1h_alignment/ZNF281-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR403MJY_ChIP_ZNF281_HepG2_ENCSR712WOB_profile_pattern_1.n_3620-vs-ZNF281-201.alignment profile-znf_b1h_alignment/ZNF281-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR403MJY_ChIP_ZNF281_HepG2_ENCSR712WOB_profile_pattern_20.n_47-vs-ZNF281-201.alignment profile-znf_b1h_alignment/ZNF281-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR403MJY_ChIP_ZNF281_HepG2_ENCSR712WOB_profile_pattern_21.n_22-vs-ZNF281-201.alignment profile-znf_b1h_alignment/ZNF281-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR403MJY_ChIP_ZNF281_HepG2_ENCSR712WOB_profile_pattern_2.n_2124-vs-ZNF281-201.alignment profile-znf_b1h_alignment/ZNF281-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR403MJY_ChIP_ZNF281_HepG2_ENCSR712WOB_profile_pattern_3.n_1528-vs-ZNF281-201.alignment profile-znf_b1h_alignment/ZNF281-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR403MJY_ChIP_ZNF281_HepG2_ENCSR712WOB_profile_pattern_4.n_1215-vs-ZNF281-201.alignment profile-znf_b1h_alignment/ZNF281-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR403MJY_ChIP_ZNF281_HepG2_ENCSR712WOB_profile_pattern_5.n_900-vs-ZNF281-201.alignment profile-znf_b1h_alignment/ZNF281-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR403MJY_ChIP_ZNF281_HepG2_ENCSR712WOB_profile_pattern_6.n_413-vs-ZNF281-201.alignment profile-znf_b1h_alignment/ZNF281-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR403MJY_ChIP_ZNF281_HepG2_ENCSR712WOB_profile_pattern_7.n_380-vs-ZNF281-201.alignment profile-znf_b1h_alignment/ZNF281-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR403MJY_ChIP_ZNF281_HepG2_ENCSR712WOB_profile_pattern_8.n_362-vs-ZNF281-201.alignment profile-znf_b1h_alignment/ZNF281-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF281-201/pos_patterns.ENCSR403MJY_ChIP_ZNF281_HepG2_ENCSR712WOB_profile_pattern_9.n_219-vs-ZNF281-201.alignment profile-znf_b1h_alignment/ZNF281-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF28-203/ChipExo_models_ZNF28_profile-pos.pattern_0.n_6504-vs-ZNF28-203.alignment profile-znf_b1h_alignment/ZNF28-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF28-203/ChipExo_models_ZNF28_profile-pos.pattern_1.n_3905-vs-ZNF28-203.alignment profile-znf_b1h_alignment/ZNF28-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF28-203/ChipExo_models_ZNF28_profile-pos.pattern_2.n_125-vs-ZNF28-203.alignment profile-znf_b1h_alignment/ZNF28-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF28-203/ChipExo_models_ZNF28_profile-pos.pattern_3.n_121-vs-ZNF28-203.alignment profile-znf_b1h_alignment/ZNF28-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF28-203/ChipExo_models_ZNF28_profile-pos.pattern_4.n_42-vs-ZNF28-203.alignment profile-znf_b1h_alignment/ZNF28-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF28-203/ChipExo_models_ZNF28_profile-pos.pattern_5.n_41-vs-ZNF28-203.alignment profile-znf_b1h_alignment/ZNF28-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF28-203/ChipExo_models_ZNF28_profile-pos.pattern_6.n_30-vs-ZNF28-203.alignment profile-znf_b1h_alignment/ZNF28-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF282-204/ChipExo_models_ZNF282_profile-pos.pattern_0.n_8320-vs-ZNF282-204.alignment profile-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF282-204/ChipExo_models_ZNF282_profile-pos.pattern_1.n_238-vs-ZNF282-204.alignment profile-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF282-204/ChipExo_models_ZNF282_profile-pos.pattern_2.n_211-vs-ZNF282-204.alignment profile-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF282-204/ChipExo_models_ZNF282_profile-pos.pattern_3.n_173-vs-ZNF282-204.alignment profile-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF282-204/ChipExo_models_ZNF282_profile-pos.pattern_4.n_144-vs-ZNF282-204.alignment profile-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF282-204/ChipExo_models_ZNF282_profile-pos.pattern_5.n_97-vs-ZNF282-204.alignment profile-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF282-204/ChipExo_models_ZNF282_profile-pos.pattern_6.n_88-vs-ZNF282-204.alignment profile-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF282-204/ChipExo_models_ZNF282_profile-pos.pattern_7.n_45-vs-ZNF282-204.alignment profile-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF282-204/ChipExo_models_ZNF282_profile-pos.pattern_8.n_37-vs-ZNF282-204.alignment profile-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF282-204/neg_patterns.ENCSR742TMU_ChIP_ZNF282_K562_ENCSR610PAH_profile_pattern_0.n_25-vs-ZNF282-204.alignment profile-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF282-204/neg_patterns.ENCSR742TMU_ChIP_ZNF282_K562_ENCSR610PAH_profile_pattern_1.n_21-vs-ZNF282-204.alignment profile-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF282-204/pos_patterns.ENCSR229KXQ_ChIP_ZNF282_K562_ENCSR536ZAW_profile_pattern_0.n_608-vs-ZNF282-204.alignment profile-znf_b1h_alignment/ZNF282-204/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF282-204/pos_patterns.ENCSR229KXQ_ChIP_ZNF282_K562_ENCSR536ZAW_profile_pattern_5.n_94-vs-ZNF282-204.alignment profile-znf_b1h_alignment/ZNF282-204/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF282-204/pos_patterns.ENCSR229KXQ_ChIP_ZNF282_K562_ENCSR536ZAW_profile_pattern_7.n_75-vs-ZNF282-204.alignment profile-znf_b1h_alignment/ZNF282-204/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF282-204/pos_patterns.ENCSR229KXQ_ChIP_ZNF282_K562_ENCSR536ZAW_profile_pattern_9.n_70-vs-ZNF282-204.alignment profile-znf_b1h_alignment/ZNF282-204/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF282-204/pos_patterns.ENCSR742TMU_ChIP_ZNF282_K562_ENCSR610PAH_profile_pattern_1.n_2266-vs-ZNF282-204.alignment profile-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF282-204/pos_patterns.ENCSR742TMU_ChIP_ZNF282_K562_ENCSR610PAH_profile_pattern_2.n_673-vs-ZNF282-204.alignment profile-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF282-204/pos_patterns.ENCSR742TMU_ChIP_ZNF282_K562_ENCSR610PAH_profile_pattern_3.n_648-vs-ZNF282-204.alignment profile-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF282-204/pos_patterns.ENCSR742TMU_ChIP_ZNF282_K562_ENCSR610PAH_profile_pattern_4.n_337-vs-ZNF282-204.alignment profile-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF282-204/pos_patterns.ENCSR742TMU_ChIP_ZNF282_K562_ENCSR610PAH_profile_pattern_5.n_279-vs-ZNF282-204.alignment profile-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF282-204/pos_patterns.ENCSR742TMU_ChIP_ZNF282_K562_ENCSR610PAH_profile_pattern_6.n_239-vs-ZNF282-204.alignment profile-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF282-204/pos_patterns.ENCSR742TMU_ChIP_ZNF282_K562_ENCSR610PAH_profile_pattern_7.n_92-vs-ZNF282-204.alignment profile-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF282-204/pos_patterns.ENCSR742TMU_ChIP_ZNF282_K562_ENCSR610PAH_profile_pattern_8.n_77-vs-ZNF282-204.alignment profile-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF282-204/pos_patterns.ENCSR742TMU_ChIP_ZNF282_K562_ENCSR610PAH_profile_pattern_9.n_69-vs-ZNF282-204.alignment profile-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF282-204/pos_patterns.ENCSR752NDX_ChIP_ZNF282_HepG2_ENCSR188GNN_profile_pattern_0.n_374-vs-ZNF282-204.alignment profile-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF282-204/pos_patterns.ENCSR752NDX_ChIP_ZNF282_HepG2_ENCSR188GNN_profile_pattern_1.n_166-vs-ZNF282-204.alignment profile-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF282-204/pos_patterns.ENCSR752NDX_ChIP_ZNF282_HepG2_ENCSR188GNN_profile_pattern_2.n_145-vs-ZNF282-204.alignment profile-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF282-204/pos_patterns.ENCSR752NDX_ChIP_ZNF282_HepG2_ENCSR188GNN_profile_pattern_3.n_93-vs-ZNF282-204.alignment profile-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF282-204/pos_patterns.ENCSR752NDX_ChIP_ZNF282_HepG2_ENCSR188GNN_profile_pattern_4.n_78-vs-ZNF282-204.alignment profile-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF282-204/pos_patterns.ENCSR752NDX_ChIP_ZNF282_HepG2_ENCSR188GNN_profile_pattern_5.n_53-vs-ZNF282-204.alignment profile-znf_b1h_alignment/ZNF282-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF283-201/ChipExo_models_ZNF283_profile-pos.pattern_0.n_1463-vs-ZNF283-201.alignment profile-znf_b1h_alignment/ZNF283-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF283-201/ChipExo_models_ZNF283_profile-pos.pattern_1.n_481-vs-ZNF283-201.alignment profile-znf_b1h_alignment/ZNF283-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF283-201/ChipExo_models_ZNF283_profile-pos.pattern_2.n_460-vs-ZNF283-201.alignment profile-znf_b1h_alignment/ZNF283-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF283-201/ChipExo_models_ZNF283_profile-pos.pattern_3.n_191-vs-ZNF283-201.alignment profile-znf_b1h_alignment/ZNF283-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF283-201/ChipExo_models_ZNF283_profile-pos.pattern_4.n_173-vs-ZNF283-201.alignment profile-znf_b1h_alignment/ZNF283-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF283-201/ChipExo_models_ZNF283_profile-pos.pattern_5.n_87-vs-ZNF283-201.alignment profile-znf_b1h_alignment/ZNF283-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF283-201/ChipExo_models_ZNF283_profile-pos.pattern_6.n_39-vs-ZNF283-201.alignment profile-znf_b1h_alignment/ZNF283-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF283-201/ChipExo_models_ZNF283_profile-pos.pattern_7.n_31-vs-ZNF283-201.alignment profile-znf_b1h_alignment/ZNF283-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF283-201/ChipExo_models_ZNF283_profile-pos.pattern_8.n_23-vs-ZNF283-201.alignment profile-znf_b1h_alignment/ZNF283-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF284-201/ChipExo_models_ZNF284_profile-pos.pattern_0.n_3814-vs-ZNF284-201.alignment profile-znf_b1h_alignment/ZNF284-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF284-201/ChipExo_models_ZNF284_profile-pos.pattern_1.n_302-vs-ZNF284-201.alignment profile-znf_b1h_alignment/ZNF284-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF284-201/ChipExo_models_ZNF284_profile-pos.pattern_2.n_203-vs-ZNF284-201.alignment profile-znf_b1h_alignment/ZNF284-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF284-201/ChipExo_models_ZNF284_profile-pos.pattern_3.n_67-vs-ZNF284-201.alignment profile-znf_b1h_alignment/ZNF284-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF284-201/ChipExo_models_ZNF284_profile-pos.pattern_4.n_63-vs-ZNF284-201.alignment profile-znf_b1h_alignment/ZNF284-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF284-201/ChipExo_models_ZNF284_profile-pos.pattern_5.n_23-vs-ZNF284-201.alignment profile-znf_b1h_alignment/ZNF284-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF287-201/ChipExo_models_ZNF287_profile-pos.pattern_0.n_501-vs-ZNF287-201.alignment profile-znf_b1h_alignment/ZNF287-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF287-201/ChipExo_models_ZNF287_profile-pos.pattern_2.n_128-vs-ZNF287-201.alignment profile-znf_b1h_alignment/ZNF287-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF287-201/ChipExo_models_ZNF287_profile-pos.pattern_3.n_60-vs-ZNF287-201.alignment profile-znf_b1h_alignment/ZNF287-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF287-201/ChipExo_models_ZNF287_profile-pos.pattern_4.n_58-vs-ZNF287-201.alignment profile-znf_b1h_alignment/ZNF287-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF287-201/ChipExo_models_ZNF287_profile-pos.pattern_5.n_29-vs-ZNF287-201.alignment profile-znf_b1h_alignment/ZNF287-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF287-201/ChipExo_models_ZNF287_profile-pos.pattern_6.n_24-vs-ZNF287-201.alignment profile-znf_b1h_alignment/ZNF287-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF292-201/neg_patterns.ENCSR228PGT_ChIP_ZNF292_HEK293_ENCSR861EFS_profile_pattern_0.n_62-vs-ZNF292-201.alignment profile-znf_b1h_alignment/ZNF292-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF292-201/neg_patterns.ENCSR228PGT_ChIP_ZNF292_HEK293_ENCSR861EFS_profile_pattern_1.n_59-vs-ZNF292-201.alignment profile-znf_b1h_alignment/ZNF292-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF292-201/neg_patterns.ENCSR228PGT_ChIP_ZNF292_HEK293_ENCSR861EFS_profile_pattern_3.n_48-vs-ZNF292-201.alignment profile-znf_b1h_alignment/ZNF292-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF292-201/neg_patterns.ENCSR228PGT_ChIP_ZNF292_HEK293_ENCSR861EFS_profile_pattern_4.n_44-vs-ZNF292-201.alignment profile-znf_b1h_alignment/ZNF292-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF292-201/neg_patterns.ENCSR853BYT_ChIP_ZNF292_HepG2_ENCSR582TRX_profile_pattern_0.n_58-vs-ZNF292-201.alignment profile-znf_b1h_alignment/ZNF292-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF292-201/pos_patterns.ENCSR228PGT_ChIP_ZNF292_HEK293_ENCSR861EFS_profile_pattern_4.n_27-vs-ZNF292-201.alignment profile-znf_b1h_alignment/ZNF292-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF292-201/pos_patterns.ENCSR853BYT_ChIP_ZNF292_HepG2_ENCSR582TRX_profile_pattern_10.n_224-vs-ZNF292-201.alignment profile-znf_b1h_alignment/ZNF292-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF292-201/pos_patterns.ENCSR853BYT_ChIP_ZNF292_HepG2_ENCSR582TRX_profile_pattern_11.n_193-vs-ZNF292-201.alignment profile-znf_b1h_alignment/ZNF292-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF292-201/pos_patterns.ENCSR853BYT_ChIP_ZNF292_HepG2_ENCSR582TRX_profile_pattern_12.n_186-vs-ZNF292-201.alignment profile-znf_b1h_alignment/ZNF292-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF292-201/pos_patterns.ENCSR853BYT_ChIP_ZNF292_HepG2_ENCSR582TRX_profile_pattern_13.n_174-vs-ZNF292-201.alignment profile-znf_b1h_alignment/ZNF292-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF292-201/pos_patterns.ENCSR853BYT_ChIP_ZNF292_HepG2_ENCSR582TRX_profile_pattern_14.n_146-vs-ZNF292-201.alignment profile-znf_b1h_alignment/ZNF292-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF292-201/pos_patterns.ENCSR853BYT_ChIP_ZNF292_HepG2_ENCSR582TRX_profile_pattern_15.n_141-vs-ZNF292-201.alignment profile-znf_b1h_alignment/ZNF292-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF292-201/pos_patterns.ENCSR853BYT_ChIP_ZNF292_HepG2_ENCSR582TRX_profile_pattern_16.n_83-vs-ZNF292-201.alignment profile-znf_b1h_alignment/ZNF292-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF292-201/pos_patterns.ENCSR853BYT_ChIP_ZNF292_HepG2_ENCSR582TRX_profile_pattern_17.n_75-vs-ZNF292-201.alignment profile-znf_b1h_alignment/ZNF292-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF292-201/pos_patterns.ENCSR853BYT_ChIP_ZNF292_HepG2_ENCSR582TRX_profile_pattern_18.n_59-vs-ZNF292-201.alignment profile-znf_b1h_alignment/ZNF292-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF292-201/pos_patterns.ENCSR853BYT_ChIP_ZNF292_HepG2_ENCSR582TRX_profile_pattern_19.n_57-vs-ZNF292-201.alignment profile-znf_b1h_alignment/ZNF292-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF292-201/pos_patterns.ENCSR853BYT_ChIP_ZNF292_HepG2_ENCSR582TRX_profile_pattern_1.n_3550-vs-ZNF292-201.alignment profile-znf_b1h_alignment/ZNF292-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF292-201/pos_patterns.ENCSR853BYT_ChIP_ZNF292_HepG2_ENCSR582TRX_profile_pattern_20.n_22-vs-ZNF292-201.alignment profile-znf_b1h_alignment/ZNF292-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF292-201/pos_patterns.ENCSR853BYT_ChIP_ZNF292_HepG2_ENCSR582TRX_profile_pattern_21.n_20-vs-ZNF292-201.alignment profile-znf_b1h_alignment/ZNF292-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF292-201/pos_patterns.ENCSR853BYT_ChIP_ZNF292_HepG2_ENCSR582TRX_profile_pattern_2.n_2969-vs-ZNF292-201.alignment profile-znf_b1h_alignment/ZNF292-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF292-201/pos_patterns.ENCSR853BYT_ChIP_ZNF292_HepG2_ENCSR582TRX_profile_pattern_3.n_1549-vs-ZNF292-201.alignment profile-znf_b1h_alignment/ZNF292-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF292-201/pos_patterns.ENCSR853BYT_ChIP_ZNF292_HepG2_ENCSR582TRX_profile_pattern_4.n_1431-vs-ZNF292-201.alignment profile-znf_b1h_alignment/ZNF292-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF292-201/pos_patterns.ENCSR853BYT_ChIP_ZNF292_HepG2_ENCSR582TRX_profile_pattern_5.n_958-vs-ZNF292-201.alignment profile-znf_b1h_alignment/ZNF292-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF292-201/pos_patterns.ENCSR853BYT_ChIP_ZNF292_HepG2_ENCSR582TRX_profile_pattern_6.n_336-vs-ZNF292-201.alignment profile-znf_b1h_alignment/ZNF292-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF292-201/pos_patterns.ENCSR853BYT_ChIP_ZNF292_HepG2_ENCSR582TRX_profile_pattern_7.n_257-vs-ZNF292-201.alignment profile-znf_b1h_alignment/ZNF292-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF292-201/pos_patterns.ENCSR853BYT_ChIP_ZNF292_HepG2_ENCSR582TRX_profile_pattern_8.n_250-vs-ZNF292-201.alignment profile-znf_b1h_alignment/ZNF292-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF292-201/pos_patterns.ENCSR853BYT_ChIP_ZNF292_HepG2_ENCSR582TRX_profile_pattern_9.n_234-vs-ZNF292-201.alignment profile-znf_b1h_alignment/ZNF292-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF296-201/neg_patterns.ENCSR862LJQ_ChIP_ZNF296_HepG2_ENCSR406XKS_profile_pattern_0.n_34-vs-ZNF296-201.alignment profile-znf_b1h_alignment/ZNF296-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF296-201/neg_patterns.ENCSR862LJQ_ChIP_ZNF296_HepG2_ENCSR406XKS_profile_pattern_1.n_29-vs-ZNF296-201.alignment profile-znf_b1h_alignment/ZNF296-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF296-201/neg_patterns.ENCSR862LJQ_ChIP_ZNF296_HepG2_ENCSR406XKS_profile_pattern_2.n_27-vs-ZNF296-201.alignment profile-znf_b1h_alignment/ZNF296-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF296-201/neg_patterns.ENCSR862LJQ_ChIP_ZNF296_HepG2_ENCSR406XKS_profile_pattern_3.n_26-vs-ZNF296-201.alignment profile-znf_b1h_alignment/ZNF296-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF296-201/pos_patterns.ENCSR862LJQ_ChIP_ZNF296_HepG2_ENCSR406XKS_profile_pattern_0.n_1623-vs-ZNF296-201.alignment profile-znf_b1h_alignment/ZNF296-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF296-201/pos_patterns.ENCSR862LJQ_ChIP_ZNF296_HepG2_ENCSR406XKS_profile_pattern_10.n_39-vs-ZNF296-201.alignment profile-znf_b1h_alignment/ZNF296-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF296-201/pos_patterns.ENCSR862LJQ_ChIP_ZNF296_HepG2_ENCSR406XKS_profile_pattern_11.n_38-vs-ZNF296-201.alignment profile-znf_b1h_alignment/ZNF296-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF296-201/pos_patterns.ENCSR862LJQ_ChIP_ZNF296_HepG2_ENCSR406XKS_profile_pattern_1.n_362-vs-ZNF296-201.alignment profile-znf_b1h_alignment/ZNF296-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF296-201/pos_patterns.ENCSR862LJQ_ChIP_ZNF296_HepG2_ENCSR406XKS_profile_pattern_2.n_228-vs-ZNF296-201.alignment profile-znf_b1h_alignment/ZNF296-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF296-201/pos_patterns.ENCSR862LJQ_ChIP_ZNF296_HepG2_ENCSR406XKS_profile_pattern_3.n_217-vs-ZNF296-201.alignment profile-znf_b1h_alignment/ZNF296-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF296-201/pos_patterns.ENCSR862LJQ_ChIP_ZNF296_HepG2_ENCSR406XKS_profile_pattern_4.n_209-vs-ZNF296-201.alignment profile-znf_b1h_alignment/ZNF296-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF296-201/pos_patterns.ENCSR862LJQ_ChIP_ZNF296_HepG2_ENCSR406XKS_profile_pattern_5.n_203-vs-ZNF296-201.alignment profile-znf_b1h_alignment/ZNF296-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF296-201/pos_patterns.ENCSR862LJQ_ChIP_ZNF296_HepG2_ENCSR406XKS_profile_pattern_6.n_179-vs-ZNF296-201.alignment profile-znf_b1h_alignment/ZNF296-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF296-201/pos_patterns.ENCSR862LJQ_ChIP_ZNF296_HepG2_ENCSR406XKS_profile_pattern_7.n_83-vs-ZNF296-201.alignment profile-znf_b1h_alignment/ZNF296-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF296-201/pos_patterns.ENCSR862LJQ_ChIP_ZNF296_HepG2_ENCSR406XKS_profile_pattern_8.n_65-vs-ZNF296-201.alignment profile-znf_b1h_alignment/ZNF296-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF296-201/pos_patterns.ENCSR862LJQ_ChIP_ZNF296_HepG2_ENCSR406XKS_profile_pattern_9.n_55-vs-ZNF296-201.alignment profile-znf_b1h_alignment/ZNF296-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF300-201/ChipExo_models_ZNF300_profile-pos.pattern_0.n_196-vs-ZNF300-201.alignment profile-znf_b1h_alignment/ZNF300-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF300-201/ChipExo_models_ZNF300_profile-pos.pattern_1.n_124-vs-ZNF300-201.alignment profile-znf_b1h_alignment/ZNF300-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF300-201/ChipExo_models_ZNF300_profile-pos.pattern_2.n_21-vs-ZNF300-201.alignment profile-znf_b1h_alignment/ZNF300-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF300-201/ChipExo_models_ZNF300_profile-pos.pattern_3.n_21-vs-ZNF300-201.alignment profile-znf_b1h_alignment/ZNF300-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF30-201/ChipExo_models_ZNF30_profile-pos.pattern_0.n_50-vs-ZNF30-201.alignment profile-znf_b1h_alignment/ZNF30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF30-201/ChipExo_models_ZNF30_profile-pos.pattern_1.n_27-vs-ZNF30-201.alignment profile-znf_b1h_alignment/ZNF30-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF311-203/neg_patterns.ENCSR388ZRV_ChIP_ZNF311_K562_ENCSR322JYC_profile_pattern_1.n_287-vs-ZNF311-203.alignment profile-znf_b1h_alignment/ZNF311-203/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF311-203/neg_patterns.ENCSR388ZRV_ChIP_ZNF311_K562_ENCSR322JYC_profile_pattern_5.n_84-vs-ZNF311-203.alignment profile-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF311-203/neg_patterns.ENCSR388ZRV_ChIP_ZNF311_K562_ENCSR322JYC_profile_pattern_6.n_81-vs-ZNF311-203.alignment profile-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF311-203/neg_patterns.ENCSR388ZRV_ChIP_ZNF311_K562_ENCSR322JYC_profile_pattern_7.n_72-vs-ZNF311-203.alignment profile-znf_b1h_alignment/ZNF311-203/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF311-203/neg_patterns.ENCSR388ZRV_ChIP_ZNF311_K562_ENCSR322JYC_profile_pattern_9.n_43-vs-ZNF311-203.alignment profile-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF311-203/pos_patterns.ENCSR096LSN_ChIP_ZNF311_HEK293_ENCSR071XCI_profile_pattern_0.n_339-vs-ZNF311-203.alignment profile-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF311-203/pos_patterns.ENCSR096LSN_ChIP_ZNF311_HEK293_ENCSR071XCI_profile_pattern_1.n_151-vs-ZNF311-203.alignment profile-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF311-203/pos_patterns.ENCSR096LSN_ChIP_ZNF311_HEK293_ENCSR071XCI_profile_pattern_2.n_109-vs-ZNF311-203.alignment profile-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF311-203/pos_patterns.ENCSR096LSN_ChIP_ZNF311_HEK293_ENCSR071XCI_profile_pattern_3.n_105-vs-ZNF311-203.alignment profile-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF311-203/pos_patterns.ENCSR096LSN_ChIP_ZNF311_HEK293_ENCSR071XCI_profile_pattern_4.n_56-vs-ZNF311-203.alignment profile-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF311-203/pos_patterns.ENCSR096LSN_ChIP_ZNF311_HEK293_ENCSR071XCI_profile_pattern_5.n_53-vs-ZNF311-203.alignment profile-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF311-203/pos_patterns.ENCSR388ZRV_ChIP_ZNF311_K562_ENCSR322JYC_profile_pattern_0.n_2639-vs-ZNF311-203.alignment profile-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF311-203/pos_patterns.ENCSR388ZRV_ChIP_ZNF311_K562_ENCSR322JYC_profile_pattern_10.n_106-vs-ZNF311-203.alignment profile-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF311-203/pos_patterns.ENCSR388ZRV_ChIP_ZNF311_K562_ENCSR322JYC_profile_pattern_11.n_105-vs-ZNF311-203.alignment profile-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF311-203/pos_patterns.ENCSR388ZRV_ChIP_ZNF311_K562_ENCSR322JYC_profile_pattern_12.n_87-vs-ZNF311-203.alignment profile-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF311-203/pos_patterns.ENCSR388ZRV_ChIP_ZNF311_K562_ENCSR322JYC_profile_pattern_13.n_83-vs-ZNF311-203.alignment profile-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF311-203/pos_patterns.ENCSR388ZRV_ChIP_ZNF311_K562_ENCSR322JYC_profile_pattern_14.n_78-vs-ZNF311-203.alignment profile-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF311-203/pos_patterns.ENCSR388ZRV_ChIP_ZNF311_K562_ENCSR322JYC_profile_pattern_15.n_52-vs-ZNF311-203.alignment profile-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF311-203/pos_patterns.ENCSR388ZRV_ChIP_ZNF311_K562_ENCSR322JYC_profile_pattern_16.n_24-vs-ZNF311-203.alignment profile-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF311-203/pos_patterns.ENCSR388ZRV_ChIP_ZNF311_K562_ENCSR322JYC_profile_pattern_17.n_23-vs-ZNF311-203.alignment profile-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF311-203/pos_patterns.ENCSR388ZRV_ChIP_ZNF311_K562_ENCSR322JYC_profile_pattern_1.n_1393-vs-ZNF311-203.alignment profile-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF311-203/pos_patterns.ENCSR388ZRV_ChIP_ZNF311_K562_ENCSR322JYC_profile_pattern_2.n_290-vs-ZNF311-203.alignment profile-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF311-203/pos_patterns.ENCSR388ZRV_ChIP_ZNF311_K562_ENCSR322JYC_profile_pattern_3.n_269-vs-ZNF311-203.alignment profile-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF311-203/pos_patterns.ENCSR388ZRV_ChIP_ZNF311_K562_ENCSR322JYC_profile_pattern_4.n_250-vs-ZNF311-203.alignment profile-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF311-203/pos_patterns.ENCSR388ZRV_ChIP_ZNF311_K562_ENCSR322JYC_profile_pattern_5.n_229-vs-ZNF311-203.alignment profile-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF311-203/pos_patterns.ENCSR388ZRV_ChIP_ZNF311_K562_ENCSR322JYC_profile_pattern_6.n_169-vs-ZNF311-203.alignment profile-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF311-203/pos_patterns.ENCSR388ZRV_ChIP_ZNF311_K562_ENCSR322JYC_profile_pattern_7.n_149-vs-ZNF311-203.alignment profile-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF311-203/pos_patterns.ENCSR388ZRV_ChIP_ZNF311_K562_ENCSR322JYC_profile_pattern_8.n_148-vs-ZNF311-203.alignment profile-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF311-203/pos_patterns.ENCSR388ZRV_ChIP_ZNF311_K562_ENCSR322JYC_profile_pattern_9.n_111-vs-ZNF311-203.alignment profile-znf_b1h_alignment/ZNF311-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF316-201/neg_patterns.ENCSR167KBO_ChIP_ZNF316_K562_ENCSR989MRU_profile_pattern_0.n_158-vs-ZNF316-201.alignment profile-znf_b1h_alignment/ZNF316-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/neg_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_profile_pattern_1.n_975-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/neg_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_profile_pattern_21.n_47-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/neg_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_profile_pattern_22.n_36-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/neg_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_profile_pattern_23.n_31-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/neg_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_profile_pattern_24.n_28-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/neg_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_profile_pattern_25.n_28-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/neg_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_profile_pattern_26.n_26-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/neg_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_profile_pattern_27.n_25-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/neg_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_profile_pattern_2.n_348-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/neg_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_profile_pattern_3.n_244-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/neg_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_profile_pattern_4.n_195-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/neg_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_profile_pattern_5.n_144-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/neg_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_profile_pattern_6.n_144-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/neg_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_profile_pattern_7.n_93-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/neg_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_profile_pattern_8.n_89-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/neg_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_profile_pattern_9.n_84-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/neg_patterns.ENCSR795KRU_ChIP_ZNF317_WTC11_ENCSR329FHN_profile_pattern_0.n_302-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/neg_patterns.ENCSR795KRU_ChIP_ZNF317_WTC11_ENCSR329FHN_profile_pattern_10.n_53-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/neg_patterns.ENCSR795KRU_ChIP_ZNF317_WTC11_ENCSR329FHN_profile_pattern_11.n_48-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/neg_patterns.ENCSR795KRU_ChIP_ZNF317_WTC11_ENCSR329FHN_profile_pattern_12.n_22-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/neg_patterns.ENCSR795KRU_ChIP_ZNF317_WTC11_ENCSR329FHN_profile_pattern_14.n_20-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_profile_pattern_14.n_77-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_profile_pattern_15.n_65-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_profile_pattern_16.n_63-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_profile_pattern_17.n_55-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_profile_pattern_18.n_52-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_profile_pattern_19.n_51-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_profile_pattern_1.n_2174-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_profile_pattern_20.n_48-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_profile_pattern_21.n_45-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_profile_pattern_22.n_42-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_profile_pattern_23.n_41-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_profile_pattern_24.n_39-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_profile_pattern_25.n_35-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_profile_pattern_26.n_21-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_profile_pattern_2.n_2128-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_profile_pattern_3.n_1388-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_profile_pattern_4.n_1118-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_profile_pattern_5.n_849-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_profile_pattern_6.n_650-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_profile_pattern_7.n_393-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_profile_pattern_8.n_371-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR016OHL_ChIP_ZNF317_HepG2_ENCSR164VUV_profile_pattern_9.n_259-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR795KRU_ChIP_ZNF317_WTC11_ENCSR329FHN_profile_pattern_0.n_3496-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR795KRU_ChIP_ZNF317_WTC11_ENCSR329FHN_profile_pattern_10.n_42-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR795KRU_ChIP_ZNF317_WTC11_ENCSR329FHN_profile_pattern_11.n_35-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF317-201/pos_patterns.ENCSR795KRU_ChIP_ZNF317_WTC11_ENCSR329FHN_profile_pattern_13.n_24-vs-ZNF317-201.alignment profile-znf_b1h_alignment/ZNF317-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF318-201/neg_patterns.ENCSR334HSW_ChIP_ZNF318_K562_ENCSR964MJN_profile_pattern_4.n_20-vs-ZNF318-201.alignment profile-znf_b1h_alignment/ZNF318-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF318-201/neg_patterns.ENCSR832PID_ChIP_ZNF318_HepG2_ENCSR911CCE_profile_pattern_0.n_96-vs-ZNF318-201.alignment profile-znf_b1h_alignment/ZNF318-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF318-201/neg_patterns.ENCSR832PID_ChIP_ZNF318_HepG2_ENCSR911CCE_profile_pattern_1.n_79-vs-ZNF318-201.alignment profile-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF318-201/neg_patterns.ENCSR832PID_ChIP_ZNF318_HepG2_ENCSR911CCE_profile_pattern_2.n_49-vs-ZNF318-201.alignment profile-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF318-201/neg_patterns.ENCSR832PID_ChIP_ZNF318_HepG2_ENCSR911CCE_profile_pattern_3.n_45-vs-ZNF318-201.alignment profile-znf_b1h_alignment/ZNF318-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF318-201/neg_patterns.ENCSR832PID_ChIP_ZNF318_HepG2_ENCSR911CCE_profile_pattern_5.n_27-vs-ZNF318-201.alignment profile-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF318-201/neg_patterns.ENCSR832PID_ChIP_ZNF318_HepG2_ENCSR911CCE_profile_pattern_6.n_23-vs-ZNF318-201.alignment profile-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF318-201/neg_patterns.ENCSR832PID_ChIP_ZNF318_HepG2_ENCSR911CCE_profile_pattern_7.n_24-vs-ZNF318-201.alignment profile-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF318-201/neg_patterns.ENCSR832PID_ChIP_ZNF318_HepG2_ENCSR911CCE_profile_pattern_8.n_23-vs-ZNF318-201.alignment profile-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF318-201/neg_patterns.ENCSR832PID_ChIP_ZNF318_HepG2_ENCSR911CCE_profile_pattern_9.n_20-vs-ZNF318-201.alignment profile-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR334HSW_ChIP_ZNF318_K562_ENCSR964MJN_profile_pattern_0.n_129-vs-ZNF318-201.alignment profile-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR334HSW_ChIP_ZNF318_K562_ENCSR964MJN_profile_pattern_1.n_124-vs-ZNF318-201.alignment profile-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR334HSW_ChIP_ZNF318_K562_ENCSR964MJN_profile_pattern_2.n_111-vs-ZNF318-201.alignment profile-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR334HSW_ChIP_ZNF318_K562_ENCSR964MJN_profile_pattern_3.n_93-vs-ZNF318-201.alignment profile-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR334HSW_ChIP_ZNF318_K562_ENCSR964MJN_profile_pattern_4.n_93-vs-ZNF318-201.alignment profile-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR334HSW_ChIP_ZNF318_K562_ENCSR964MJN_profile_pattern_5.n_85-vs-ZNF318-201.alignment profile-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR334HSW_ChIP_ZNF318_K562_ENCSR964MJN_profile_pattern_6.n_73-vs-ZNF318-201.alignment profile-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR334HSW_ChIP_ZNF318_K562_ENCSR964MJN_profile_pattern_7.n_65-vs-ZNF318-201.alignment profile-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR334HSW_ChIP_ZNF318_K562_ENCSR964MJN_profile_pattern_8.n_47-vs-ZNF318-201.alignment profile-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR352BJL_ChIP_ZNF318_K562_ENCSR621BIB_profile_pattern_0.n_2753-vs-ZNF318-201.alignment profile-znf_b1h_alignment/ZNF318-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR352BJL_ChIP_ZNF318_K562_ENCSR621BIB_profile_pattern_11.n_61-vs-ZNF318-201.alignment profile-znf_b1h_alignment/ZNF318-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF318-201/pos_patterns.ENCSR352BJL_ChIP_ZNF318_K562_ENCSR621BIB_profile_pattern_12.n_49-vs-ZNF318-201.alignment profile-znf_b1h_alignment/ZNF318-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF319-201/pos_patterns.ENCSR231PDA_ChIP_ZNF319_K562_ENCSR603UUT_profile_pattern_2.n_390-vs-ZNF319-201.alignment profile-znf_b1h_alignment/ZNF319-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF319-201/pos_patterns.ENCSR231PDA_ChIP_ZNF319_K562_ENCSR603UUT_profile_pattern_4.n_215-vs-ZNF319-201.alignment profile-znf_b1h_alignment/ZNF319-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR182QWU_ChIP_ZNF3_HepG2_ENCSR581SAI_profile_pattern_1.n_1102-vs-ZNF3-202.alignment profile-znf_b1h_alignment/ZNF3-202/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR182QWU_ChIP_ZNF3_HepG2_ENCSR581SAI_profile_pattern_6.n_276-vs-ZNF3-202.alignment profile-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR182QWU_ChIP_ZNF3_HepG2_ENCSR581SAI_profile_pattern_7.n_261-vs-ZNF3-202.alignment profile-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR182QWU_ChIP_ZNF3_HepG2_ENCSR581SAI_profile_pattern_8.n_178-vs-ZNF3-202.alignment profile-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR182QWU_ChIP_ZNF3_HepG2_ENCSR581SAI_profile_pattern_9.n_144-vs-ZNF3-202.alignment profile-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR195QFV_ChIP_ZNF3_K562_ENCSR943BMU_profile_pattern_0.n_284-vs-ZNF3-202.alignment profile-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR195QFV_ChIP_ZNF3_K562_ENCSR943BMU_profile_pattern_10.n_69-vs-ZNF3-202.alignment profile-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR195QFV_ChIP_ZNF3_K562_ENCSR943BMU_profile_pattern_11.n_62-vs-ZNF3-202.alignment profile-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR195QFV_ChIP_ZNF3_K562_ENCSR943BMU_profile_pattern_12.n_59-vs-ZNF3-202.alignment profile-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR195QFV_ChIP_ZNF3_K562_ENCSR943BMU_profile_pattern_13.n_57-vs-ZNF3-202.alignment profile-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR195QFV_ChIP_ZNF3_K562_ENCSR943BMU_profile_pattern_14.n_40-vs-ZNF3-202.alignment profile-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR195QFV_ChIP_ZNF3_K562_ENCSR943BMU_profile_pattern_15.n_20-vs-ZNF3-202.alignment profile-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR195QFV_ChIP_ZNF3_K562_ENCSR943BMU_profile_pattern_1.n_283-vs-ZNF3-202.alignment profile-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR195QFV_ChIP_ZNF3_K562_ENCSR943BMU_profile_pattern_2.n_189-vs-ZNF3-202.alignment profile-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR195QFV_ChIP_ZNF3_K562_ENCSR943BMU_profile_pattern_3.n_161-vs-ZNF3-202.alignment profile-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR195QFV_ChIP_ZNF3_K562_ENCSR943BMU_profile_pattern_4.n_143-vs-ZNF3-202.alignment profile-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR195QFV_ChIP_ZNF3_K562_ENCSR943BMU_profile_pattern_5.n_128-vs-ZNF3-202.alignment profile-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR195QFV_ChIP_ZNF3_K562_ENCSR943BMU_profile_pattern_6.n_119-vs-ZNF3-202.alignment profile-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR195QFV_ChIP_ZNF3_K562_ENCSR943BMU_profile_pattern_7.n_104-vs-ZNF3-202.alignment profile-znf_b1h_alignment/ZNF3-202/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR195QFV_ChIP_ZNF3_K562_ENCSR943BMU_profile_pattern_9.n_70-vs-ZNF3-202.alignment profile-znf_b1h_alignment/ZNF3-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR934RJP_ChIP_ZNF3_K562_ENCSR155QUT_profile_pattern_0.n_649-vs-ZNF3-202.alignment profile-znf_b1h_alignment/ZNF3-202/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF3-202/pos_patterns.ENCSR934RJP_ChIP_ZNF3_K562_ENCSR155QUT_profile_pattern_1.n_157-vs-ZNF3-202.alignment profile-znf_b1h_alignment/ZNF3-202/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF324-201/Hughes_GR_models_ZNF324_profile-pos.pattern_1.n_91-vs-ZNF324-201.alignment profile-znf_b1h_alignment/ZNF324-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF324-201/Hughes_GR_models_ZNF324_profile-pos.pattern_2.n_86-vs-ZNF324-201.alignment profile-znf_b1h_alignment/ZNF324-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF324-201/Hughes_GR_models_ZNF324_profile-pos.pattern_4.n_58-vs-ZNF324-201.alignment profile-znf_b1h_alignment/ZNF324-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF324-201/Hughes_GR_models_ZNF324_profile-pos.pattern_5.n_55-vs-ZNF324-201.alignment profile-znf_b1h_alignment/ZNF324-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF324-201/neg_patterns.ENCSR712KVZ_ChIP_ZNF324_K562_ENCSR861IYW_profile_pattern_0.n_758-vs-ZNF324-201.alignment profile-znf_b1h_alignment/ZNF324-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF324-201/neg_patterns.ENCSR712KVZ_ChIP_ZNF324_K562_ENCSR861IYW_profile_pattern_10.n_21-vs-ZNF324-201.alignment profile-znf_b1h_alignment/ZNF324-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF324-201/neg_patterns.ENCSR712KVZ_ChIP_ZNF324_K562_ENCSR861IYW_profile_pattern_1.n_539-vs-ZNF324-201.alignment profile-znf_b1h_alignment/ZNF324-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF324-201/neg_patterns.ENCSR712KVZ_ChIP_ZNF324_K562_ENCSR861IYW_profile_pattern_2.n_211-vs-ZNF324-201.alignment profile-znf_b1h_alignment/ZNF324-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF324-201/neg_patterns.ENCSR712KVZ_ChIP_ZNF324_K562_ENCSR861IYW_profile_pattern_3.n_151-vs-ZNF324-201.alignment profile-znf_b1h_alignment/ZNF324-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF324-201/neg_patterns.ENCSR768HOH_ChIP_ZNF324_HEK293_ENCSR245QAZ_profile_pattern_1.n_22-vs-ZNF324-201.alignment profile-znf_b1h_alignment/ZNF324-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF324-201/pos_patterns.ENCSR712KVZ_ChIP_ZNF324_K562_ENCSR861IYW_profile_pattern_10.n_150-vs-ZNF324-201.alignment profile-znf_b1h_alignment/ZNF324-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF324-201/pos_patterns.ENCSR712KVZ_ChIP_ZNF324_K562_ENCSR861IYW_profile_pattern_11.n_116-vs-ZNF324-201.alignment profile-znf_b1h_alignment/ZNF324-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF324-201/pos_patterns.ENCSR712KVZ_ChIP_ZNF324_K562_ENCSR861IYW_profile_pattern_12.n_112-vs-ZNF324-201.alignment profile-znf_b1h_alignment/ZNF324-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF324-201/pos_patterns.ENCSR712KVZ_ChIP_ZNF324_K562_ENCSR861IYW_profile_pattern_13.n_94-vs-ZNF324-201.alignment profile-znf_b1h_alignment/ZNF324-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF324-201/pos_patterns.ENCSR712KVZ_ChIP_ZNF324_K562_ENCSR861IYW_profile_pattern_14.n_59-vs-ZNF324-201.alignment profile-znf_b1h_alignment/ZNF324-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF324-201/pos_patterns.ENCSR712KVZ_ChIP_ZNF324_K562_ENCSR861IYW_profile_pattern_15.n_43-vs-ZNF324-201.alignment profile-znf_b1h_alignment/ZNF324-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF324-201/pos_patterns.ENCSR712KVZ_ChIP_ZNF324_K562_ENCSR861IYW_profile_pattern_1.n_488-vs-ZNF324-201.alignment profile-znf_b1h_alignment/ZNF324-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF324-201/pos_patterns.ENCSR712KVZ_ChIP_ZNF324_K562_ENCSR861IYW_profile_pattern_3.n_211-vs-ZNF324-201.alignment profile-znf_b1h_alignment/ZNF324-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF324-201/pos_patterns.ENCSR712KVZ_ChIP_ZNF324_K562_ENCSR861IYW_profile_pattern_6.n_206-vs-ZNF324-201.alignment profile-znf_b1h_alignment/ZNF324-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF324-201/pos_patterns.ENCSR768HOH_ChIP_ZNF324_HEK293_ENCSR245QAZ_profile_pattern_2.n_808-vs-ZNF324-201.alignment profile-znf_b1h_alignment/ZNF324-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF324-201/pos_patterns.ENCSR768HOH_ChIP_ZNF324_HEK293_ENCSR245QAZ_profile_pattern_3.n_644-vs-ZNF324-201.alignment profile-znf_b1h_alignment/ZNF324-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF324-201/pos_patterns.ENCSR768HOH_ChIP_ZNF324_HEK293_ENCSR245QAZ_profile_pattern_4.n_530-vs-ZNF324-201.alignment profile-znf_b1h_alignment/ZNF324-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF324-201/pos_patterns.ENCSR768HOH_ChIP_ZNF324_HEK293_ENCSR245QAZ_profile_pattern_5.n_298-vs-ZNF324-201.alignment profile-znf_b1h_alignment/ZNF324-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF324-201/pos_patterns.ENCSR768HOH_ChIP_ZNF324_HEK293_ENCSR245QAZ_profile_pattern_6.n_187-vs-ZNF324-201.alignment profile-znf_b1h_alignment/ZNF324-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF324-201/pos_patterns.ENCSR768HOH_ChIP_ZNF324_HEK293_ENCSR245QAZ_profile_pattern_7.n_136-vs-ZNF324-201.alignment profile-znf_b1h_alignment/ZNF324-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF324-201/pos_patterns.ENCSR768HOH_ChIP_ZNF324_HEK293_ENCSR245QAZ_profile_pattern_8.n_104-vs-ZNF324-201.alignment profile-znf_b1h_alignment/ZNF324-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF324-201/pos_patterns.ENCSR768HOH_ChIP_ZNF324_HEK293_ENCSR245QAZ_profile_pattern_9.n_27-vs-ZNF324-201.alignment profile-znf_b1h_alignment/ZNF324-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF329-201/Hughes_GR_models_ZNF329_profile-neg.pattern_0.n_34-vs-ZNF329-201.alignment profile-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF329-201/Hughes_GR_models_ZNF329_profile-neg.pattern_1.n_32-vs-ZNF329-201.alignment profile-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF329-201/Hughes_GR_models_ZNF329_profile-neg.pattern_2.n_30-vs-ZNF329-201.alignment profile-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF329-201/Hughes_GR_models_ZNF329_profile-neg.pattern_3.n_29-vs-ZNF329-201.alignment profile-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF329-201/Hughes_GR_models_ZNF329_profile-neg.pattern_4.n_29-vs-ZNF329-201.alignment profile-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF329-201/Hughes_GR_models_ZNF329_profile-neg.pattern_5.n_28-vs-ZNF329-201.alignment profile-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF329-201/Hughes_GR_models_ZNF329_profile-neg.pattern_6.n_23-vs-ZNF329-201.alignment profile-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF329-201/Hughes_GR_models_ZNF329_profile-pos.pattern_0.n_894-vs-ZNF329-201.alignment profile-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF329-201/Hughes_GR_models_ZNF329_profile-pos.pattern_1.n_55-vs-ZNF329-201.alignment profile-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF329-201/neg_patterns.ENCSR681KXT_ChIP_ZNF329_HepG2_ENCSR113XXA_profile_pattern_0.n_356-vs-ZNF329-201.alignment profile-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF329-201/neg_patterns.ENCSR681KXT_ChIP_ZNF329_HepG2_ENCSR113XXA_profile_pattern_1.n_246-vs-ZNF329-201.alignment profile-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF329-201/neg_patterns.ENCSR681KXT_ChIP_ZNF329_HepG2_ENCSR113XXA_profile_pattern_2.n_185-vs-ZNF329-201.alignment profile-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF329-201/neg_patterns.ENCSR681KXT_ChIP_ZNF329_HepG2_ENCSR113XXA_profile_pattern_3.n_162-vs-ZNF329-201.alignment profile-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF329-201/neg_patterns.ENCSR681KXT_ChIP_ZNF329_HepG2_ENCSR113XXA_profile_pattern_4.n_141-vs-ZNF329-201.alignment profile-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF329-201/neg_patterns.ENCSR681KXT_ChIP_ZNF329_HepG2_ENCSR113XXA_profile_pattern_5.n_125-vs-ZNF329-201.alignment profile-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF329-201/neg_patterns.ENCSR681KXT_ChIP_ZNF329_HepG2_ENCSR113XXA_profile_pattern_6.n_117-vs-ZNF329-201.alignment profile-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF329-201/neg_patterns.ENCSR681KXT_ChIP_ZNF329_HepG2_ENCSR113XXA_profile_pattern_7.n_80-vs-ZNF329-201.alignment profile-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF329-201/neg_patterns.ENCSR681KXT_ChIP_ZNF329_HepG2_ENCSR113XXA_profile_pattern_8.n_65-vs-ZNF329-201.alignment profile-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF329-201/pos_patterns.ENCSR681KXT_ChIP_ZNF329_HepG2_ENCSR113XXA_profile_pattern_0.n_1301-vs-ZNF329-201.alignment profile-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF329-201/pos_patterns.ENCSR681KXT_ChIP_ZNF329_HepG2_ENCSR113XXA_profile_pattern_10.n_140-vs-ZNF329-201.alignment profile-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF329-201/pos_patterns.ENCSR681KXT_ChIP_ZNF329_HepG2_ENCSR113XXA_profile_pattern_11.n_126-vs-ZNF329-201.alignment profile-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF329-201/pos_patterns.ENCSR681KXT_ChIP_ZNF329_HepG2_ENCSR113XXA_profile_pattern_12.n_116-vs-ZNF329-201.alignment profile-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF329-201/pos_patterns.ENCSR681KXT_ChIP_ZNF329_HepG2_ENCSR113XXA_profile_pattern_13.n_86-vs-ZNF329-201.alignment profile-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF329-201/pos_patterns.ENCSR681KXT_ChIP_ZNF329_HepG2_ENCSR113XXA_profile_pattern_14.n_63-vs-ZNF329-201.alignment profile-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF329-201/pos_patterns.ENCSR681KXT_ChIP_ZNF329_HepG2_ENCSR113XXA_profile_pattern_15.n_54-vs-ZNF329-201.alignment profile-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF329-201/pos_patterns.ENCSR681KXT_ChIP_ZNF329_HepG2_ENCSR113XXA_profile_pattern_16.n_26-vs-ZNF329-201.alignment profile-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF329-201/pos_patterns.ENCSR681KXT_ChIP_ZNF329_HepG2_ENCSR113XXA_profile_pattern_1.n_463-vs-ZNF329-201.alignment profile-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF329-201/pos_patterns.ENCSR681KXT_ChIP_ZNF329_HepG2_ENCSR113XXA_profile_pattern_2.n_458-vs-ZNF329-201.alignment profile-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF329-201/pos_patterns.ENCSR681KXT_ChIP_ZNF329_HepG2_ENCSR113XXA_profile_pattern_3.n_331-vs-ZNF329-201.alignment profile-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF329-201/pos_patterns.ENCSR681KXT_ChIP_ZNF329_HepG2_ENCSR113XXA_profile_pattern_4.n_319-vs-ZNF329-201.alignment profile-znf_b1h_alignment/ZNF329-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF329-201/pos_patterns.ENCSR681KXT_ChIP_ZNF329_HepG2_ENCSR113XXA_profile_pattern_5.n_251-vs-ZNF329-201.alignment profile-znf_b1h_alignment/ZNF329-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF331-201/neg_patterns.ENCSR369TCR_ChIP_ZNF331_HepG2_ENCSR536CRO_profile_pattern_17.n_27-vs-ZNF331-201.alignment profile-znf_b1h_alignment/ZNF331-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF331-201/neg_patterns.ENCSR369TCR_ChIP_ZNF331_HepG2_ENCSR536CRO_profile_pattern_7.n_52-vs-ZNF331-201.alignment profile-znf_b1h_alignment/ZNF331-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF331-201/neg_patterns.ENCSR860XVO_ChIP_ZNF331_MCF-7_ENCSR529AFD_profile_pattern_2.n_22-vs-ZNF331-201.alignment profile-znf_b1h_alignment/ZNF331-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF331-201/neg_patterns.ENCSR918LRB_ChIP_ZNF331_GM23338_ENCSR494MGN_profile_pattern_1.n_58-vs-ZNF331-201.alignment profile-znf_b1h_alignment/ZNF331-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF337-201/pos_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_profile_pattern_13.n_48-vs-ZNF337-201.alignment profile-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF337-201/pos_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_profile_pattern_14.n_47-vs-ZNF337-201.alignment profile-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF337-201/pos_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_profile_pattern_15.n_44-vs-ZNF337-201.alignment profile-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF337-201/pos_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_profile_pattern_1.n_729-vs-ZNF337-201.alignment profile-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF337-201/pos_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_profile_pattern_2.n_206-vs-ZNF337-201.alignment profile-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF337-201/pos_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_profile_pattern_3.n_169-vs-ZNF337-201.alignment profile-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF337-201/pos_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_profile_pattern_4.n_125-vs-ZNF337-201.alignment profile-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF337-201/pos_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_profile_pattern_5.n_117-vs-ZNF337-201.alignment profile-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF337-201/pos_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_profile_pattern_6.n_101-vs-ZNF337-201.alignment profile-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF337-201/pos_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_profile_pattern_7.n_100-vs-ZNF337-201.alignment profile-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF337-201/pos_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_profile_pattern_8.n_89-vs-ZNF337-201.alignment profile-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF337-201/pos_patterns.ENCSR759KXQ_ChIP_ZNF337_HepG2_ENCSR384ZXC_profile_pattern_9.n_77-vs-ZNF337-201.alignment profile-znf_b1h_alignment/ZNF337-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF33A-201/ChipExo_models_ZNF33A_profile-pos.pattern_0.n_865-vs-ZNF33A-201.alignment profile-znf_b1h_alignment/ZNF33A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF33A-201/ChipExo_models_ZNF33A_profile-pos.pattern_1.n_423-vs-ZNF33A-201.alignment profile-znf_b1h_alignment/ZNF33A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF33A-201/ChipExo_models_ZNF33A_profile-pos.pattern_2.n_91-vs-ZNF33A-201.alignment profile-znf_b1h_alignment/ZNF33A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF33A-201/ChipExo_models_ZNF33A_profile-pos.pattern_3.n_79-vs-ZNF33A-201.alignment profile-znf_b1h_alignment/ZNF33A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF33A-201/ChipExo_models_ZNF33A_profile-pos.pattern_4.n_35-vs-ZNF33A-201.alignment profile-znf_b1h_alignment/ZNF33A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF33A-201/ChipExo_models_ZNF33A_profile-pos.pattern_5.n_35-vs-ZNF33A-201.alignment profile-znf_b1h_alignment/ZNF33A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF33A-201/ChipExo_models_ZNF33A_profile-pos.pattern_6.n_26-vs-ZNF33A-201.alignment profile-znf_b1h_alignment/ZNF33A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF33A-201/neg_patterns.ENCSR110BYN_ChIP_ZNF33A_HepG2_ENCSR721ODG_profile_pattern_0.n_45-vs-ZNF33A-201.alignment profile-znf_b1h_alignment/ZNF33A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF33A-201/neg_patterns.ENCSR110BYN_ChIP_ZNF33A_HepG2_ENCSR721ODG_profile_pattern_1.n_29-vs-ZNF33A-201.alignment profile-znf_b1h_alignment/ZNF33A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF33A-201/neg_patterns.ENCSR110BYN_ChIP_ZNF33A_HepG2_ENCSR721ODG_profile_pattern_2.n_21-vs-ZNF33A-201.alignment profile-znf_b1h_alignment/ZNF33A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF33A-201/pos_patterns.ENCSR110BYN_ChIP_ZNF33A_HepG2_ENCSR721ODG_profile_pattern_0.n_858-vs-ZNF33A-201.alignment profile-znf_b1h_alignment/ZNF33A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF33A-201/pos_patterns.ENCSR110BYN_ChIP_ZNF33A_HepG2_ENCSR721ODG_profile_pattern_10.n_98-vs-ZNF33A-201.alignment profile-znf_b1h_alignment/ZNF33A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF33A-201/pos_patterns.ENCSR110BYN_ChIP_ZNF33A_HepG2_ENCSR721ODG_profile_pattern_11.n_95-vs-ZNF33A-201.alignment profile-znf_b1h_alignment/ZNF33A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF33A-201/pos_patterns.ENCSR110BYN_ChIP_ZNF33A_HepG2_ENCSR721ODG_profile_pattern_12.n_76-vs-ZNF33A-201.alignment profile-znf_b1h_alignment/ZNF33A-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF33A-203/pos_patterns.ENCSR110BYN_ChIP_ZNF33A_HepG2_ENCSR721ODG_profile_pattern_1.n_424-vs-ZNF33A-203.alignment profile-znf_b1h_alignment/ZNF33A-203/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF33B-201/ChipExo_models_ZNF33B_profile-pos.pattern_2.n_33-vs-ZNF33B-201.alignment profile-znf_b1h_alignment/ZNF33B-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF33B-201/pos_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_profile_pattern_1.n_1326-vs-ZNF33B-201.alignment profile-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF33B-201/pos_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_profile_pattern_2.n_1023-vs-ZNF33B-201.alignment profile-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF33B-201/pos_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_profile_pattern_3.n_811-vs-ZNF33B-201.alignment profile-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF33B-201/pos_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_profile_pattern_4.n_676-vs-ZNF33B-201.alignment profile-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF33B-201/pos_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_profile_pattern_5.n_397-vs-ZNF33B-201.alignment profile-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF33B-201/pos_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_profile_pattern_6.n_247-vs-ZNF33B-201.alignment profile-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF33B-201/pos_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_profile_pattern_7.n_223-vs-ZNF33B-201.alignment profile-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF33B-201/pos_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_profile_pattern_8.n_215-vs-ZNF33B-201.alignment profile-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF33B-201/pos_patterns.ENCSR052FXA_ChIP_ZNF33B_HepG2_ENCSR743RRV_profile_pattern_9.n_207-vs-ZNF33B-201.alignment profile-znf_b1h_alignment/ZNF33B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-203/Hughes_GR_models_ZNF341_profile-pos.pattern_0.n_6676-vs-ZNF341-203.alignment profile-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-203/Hughes_GR_models_ZNF341_profile-pos.pattern_10.n_25-vs-ZNF341-203.alignment profile-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-203/Hughes_GR_models_ZNF341_profile-pos.pattern_1.n_3309-vs-ZNF341-203.alignment profile-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-203/Hughes_GR_models_ZNF341_profile-pos.pattern_2.n_485-vs-ZNF341-203.alignment profile-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-203/Hughes_GR_models_ZNF341_profile-pos.pattern_3.n_143-vs-ZNF341-203.alignment profile-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-203/Hughes_GR_models_ZNF341_profile-pos.pattern_4.n_99-vs-ZNF341-203.alignment profile-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-203/Hughes_GR_models_ZNF341_profile-pos.pattern_5.n_82-vs-ZNF341-203.alignment profile-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-203/Hughes_GR_models_ZNF341_profile-pos.pattern_6.n_80-vs-ZNF341-203.alignment profile-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-203/Hughes_GR_models_ZNF341_profile-pos.pattern_7.n_76-vs-ZNF341-203.alignment profile-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-203/Hughes_GR_models_ZNF341_profile-pos.pattern_8.n_56-vs-ZNF341-203.alignment profile-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-203/Hughes_GR_models_ZNF341_profile-pos.pattern_9.n_33-vs-ZNF341-203.alignment profile-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-203/neg_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_0.n_54-vs-ZNF341-203.alignment profile-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-203/neg_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_1.n_37-vs-ZNF341-203.alignment profile-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-203/neg_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_2.n_27-vs-ZNF341-203.alignment profile-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_0.n_11193-vs-ZNF341-203.alignment profile-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_10.n_124-vs-ZNF341-203.alignment profile-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_11.n_104-vs-ZNF341-203.alignment profile-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_12.n_95-vs-ZNF341-203.alignment profile-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_13.n_72-vs-ZNF341-203.alignment profile-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_14.n_69-vs-ZNF341-203.alignment profile-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_15.n_66-vs-ZNF341-203.alignment profile-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_16.n_57-vs-ZNF341-203.alignment profile-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_17.n_36-vs-ZNF341-203.alignment profile-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_18.n_36-vs-ZNF341-203.alignment profile-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_19.n_35-vs-ZNF341-203.alignment profile-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_1.n_6543-vs-ZNF341-203.alignment profile-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_20.n_32-vs-ZNF341-203.alignment profile-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_21.n_30-vs-ZNF341-203.alignment profile-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_22.n_27-vs-ZNF341-203.alignment profile-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_23.n_25-vs-ZNF341-203.alignment profile-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_24.n_24-vs-ZNF341-203.alignment profile-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_2.n_1431-vs-ZNF341-203.alignment profile-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_3.n_1042-vs-ZNF341-203.alignment profile-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_4.n_389-vs-ZNF341-203.alignment profile-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_5.n_309-vs-ZNF341-203.alignment profile-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_6.n_241-vs-ZNF341-203.alignment profile-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_7.n_175-vs-ZNF341-203.alignment profile-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_8.n_172-vs-ZNF341-203.alignment profile-znf_b1h_alignment/ZNF341-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-203/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_9.n_129-vs-ZNF341-203.alignment profile-znf_b1h_alignment/ZNF341-203/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-204/Hughes_GR_models_ZNF341_profile-pos.pattern_10.n_25-vs-ZNF341-204.alignment profile-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-204/Hughes_GR_models_ZNF341_profile-pos.pattern_1.n_3309-vs-ZNF341-204.alignment profile-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-204/Hughes_GR_models_ZNF341_profile-pos.pattern_2.n_485-vs-ZNF341-204.alignment profile-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-204/Hughes_GR_models_ZNF341_profile-pos.pattern_3.n_143-vs-ZNF341-204.alignment profile-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-204/Hughes_GR_models_ZNF341_profile-pos.pattern_4.n_99-vs-ZNF341-204.alignment profile-znf_b1h_alignment/ZNF341-204/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-204/Hughes_GR_models_ZNF341_profile-pos.pattern_7.n_76-vs-ZNF341-204.alignment profile-znf_b1h_alignment/ZNF341-204/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-204/Hughes_GR_models_ZNF341_profile-pos.pattern_9.n_33-vs-ZNF341-204.alignment profile-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-204/neg_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_0.n_54-vs-ZNF341-204.alignment profile-znf_b1h_alignment/ZNF341-204/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-204/neg_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_2.n_27-vs-ZNF341-204.alignment profile-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_0.n_11193-vs-ZNF341-204.alignment profile-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_10.n_124-vs-ZNF341-204.alignment profile-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_11.n_104-vs-ZNF341-204.alignment profile-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_12.n_95-vs-ZNF341-204.alignment profile-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_13.n_72-vs-ZNF341-204.alignment profile-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_14.n_69-vs-ZNF341-204.alignment profile-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_15.n_66-vs-ZNF341-204.alignment profile-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_16.n_57-vs-ZNF341-204.alignment profile-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_17.n_36-vs-ZNF341-204.alignment profile-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_18.n_36-vs-ZNF341-204.alignment profile-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_19.n_35-vs-ZNF341-204.alignment profile-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_1.n_6543-vs-ZNF341-204.alignment profile-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_20.n_32-vs-ZNF341-204.alignment profile-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_21.n_30-vs-ZNF341-204.alignment profile-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_22.n_27-vs-ZNF341-204.alignment profile-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_23.n_25-vs-ZNF341-204.alignment profile-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_24.n_24-vs-ZNF341-204.alignment profile-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_2.n_1431-vs-ZNF341-204.alignment profile-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_3.n_1042-vs-ZNF341-204.alignment profile-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_4.n_389-vs-ZNF341-204.alignment profile-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_5.n_309-vs-ZNF341-204.alignment profile-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_6.n_241-vs-ZNF341-204.alignment profile-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_7.n_175-vs-ZNF341-204.alignment profile-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_8.n_172-vs-ZNF341-204.alignment profile-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF341-204/pos_patterns.ENCSR185FOY_ChIP_ZNF341_HEK293_ENCSR866NFF_profile_pattern_9.n_129-vs-ZNF341-204.alignment profile-znf_b1h_alignment/ZNF341-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF34-201/Hughes_GR_models_ZNF34_profile-pos.pattern_0.n_42-vs-ZNF34-201.alignment profile-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF34-201/Hughes_GR_models_ZNF34_profile-pos.pattern_1.n_33-vs-ZNF34-201.alignment profile-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF34-201/Hughes_GR_models_ZNF34_profile-pos.pattern_2.n_33-vs-ZNF34-201.alignment profile-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF34-201/Hughes_GR_models_ZNF34_profile-pos.pattern_3.n_32-vs-ZNF34-201.alignment profile-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF34-201/Hughes_GR_models_ZNF34_profile-pos.pattern_4.n_21-vs-ZNF34-201.alignment profile-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF34-201/Hughes_GR_models_ZNF34_profile-pos.pattern_5.n_20-vs-ZNF34-201.alignment profile-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF34-201/neg_patterns.ENCSR727PIC_ChIP_ZNF34_HEK293_ENCSR976JEH_profile_pattern_0.n_48-vs-ZNF34-201.alignment profile-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF34-201/neg_patterns.ENCSR904JEY_ChIP_ZNF34_HepG2_ENCSR737MQL_profile_pattern_0.n_30-vs-ZNF34-201.alignment profile-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF34-201/neg_patterns.ENCSR904JEY_ChIP_ZNF34_HepG2_ENCSR737MQL_profile_pattern_1.n_24-vs-ZNF34-201.alignment profile-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF34-201/neg_patterns.ENCSR904JEY_ChIP_ZNF34_HepG2_ENCSR737MQL_profile_pattern_2.n_22-vs-ZNF34-201.alignment profile-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF34-201/pos_patterns.ENCSR727PIC_ChIP_ZNF34_HEK293_ENCSR976JEH_profile_pattern_0.n_8266-vs-ZNF34-201.alignment profile-znf_b1h_alignment/ZNF34-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF34-201/pos_patterns.ENCSR727PIC_ChIP_ZNF34_HEK293_ENCSR976JEH_profile_pattern_1.n_391-vs-ZNF34-201.alignment profile-znf_b1h_alignment/ZNF34-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF34-201/pos_patterns.ENCSR904JEY_ChIP_ZNF34_HepG2_ENCSR737MQL_profile_pattern_0.n_1776-vs-ZNF34-201.alignment profile-znf_b1h_alignment/ZNF34-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF343-201/neg_patterns.ENCSR938VRO_ChIP_ZNF343_HepG2_ENCSR935PIN_profile_pattern_3.n_29-vs-ZNF343-201.alignment profile-znf_b1h_alignment/ZNF343-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF343-201/neg_patterns.ENCSR938VRO_ChIP_ZNF343_HepG2_ENCSR935PIN_profile_pattern_4.n_25-vs-ZNF343-201.alignment profile-znf_b1h_alignment/ZNF343-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF343-201/neg_patterns.ENCSR938VRO_ChIP_ZNF343_HepG2_ENCSR935PIN_profile_pattern_6.n_23-vs-ZNF343-201.alignment profile-znf_b1h_alignment/ZNF343-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF343-201/neg_patterns.ENCSR938VRO_ChIP_ZNF343_HepG2_ENCSR935PIN_profile_pattern_7.n_21-vs-ZNF343-201.alignment profile-znf_b1h_alignment/ZNF343-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF343-201/pos_patterns.ENCSR938VRO_ChIP_ZNF343_HepG2_ENCSR935PIN_profile_pattern_0.n_1978-vs-ZNF343-201.alignment profile-znf_b1h_alignment/ZNF343-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF343-201/pos_patterns.ENCSR938VRO_ChIP_ZNF343_HepG2_ENCSR935PIN_profile_pattern_10.n_176-vs-ZNF343-201.alignment profile-znf_b1h_alignment/ZNF343-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF343-201/pos_patterns.ENCSR938VRO_ChIP_ZNF343_HepG2_ENCSR935PIN_profile_pattern_11.n_149-vs-ZNF343-201.alignment profile-znf_b1h_alignment/ZNF343-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF343-201/pos_patterns.ENCSR938VRO_ChIP_ZNF343_HepG2_ENCSR935PIN_profile_pattern_12.n_141-vs-ZNF343-201.alignment profile-znf_b1h_alignment/ZNF343-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF343-201/pos_patterns.ENCSR938VRO_ChIP_ZNF343_HepG2_ENCSR935PIN_profile_pattern_13.n_60-vs-ZNF343-201.alignment profile-znf_b1h_alignment/ZNF343-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF343-201/pos_patterns.ENCSR938VRO_ChIP_ZNF343_HepG2_ENCSR935PIN_profile_pattern_1.n_1389-vs-ZNF343-201.alignment profile-znf_b1h_alignment/ZNF343-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF343-201/pos_patterns.ENCSR938VRO_ChIP_ZNF343_HepG2_ENCSR935PIN_profile_pattern_8.n_269-vs-ZNF343-201.alignment profile-znf_b1h_alignment/ZNF343-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF343-201/pos_patterns.ENCSR938VRO_ChIP_ZNF343_HepG2_ENCSR935PIN_profile_pattern_9.n_256-vs-ZNF343-201.alignment profile-znf_b1h_alignment/ZNF343-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF347-201/pos_patterns.ENCSR590FLL_ChIP_ZNF347_K562_ENCSR142MCA_profile_pattern_0.n_152-vs-ZNF347-201.alignment profile-znf_b1h_alignment/ZNF347-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF347-201/pos_patterns.ENCSR590FLL_ChIP_ZNF347_K562_ENCSR142MCA_profile_pattern_1.n_61-vs-ZNF347-201.alignment profile-znf_b1h_alignment/ZNF347-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF347-201/pos_patterns.ENCSR590FLL_ChIP_ZNF347_K562_ENCSR142MCA_profile_pattern_2.n_46-vs-ZNF347-201.alignment profile-znf_b1h_alignment/ZNF347-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF347-201/pos_patterns.ENCSR590FLL_ChIP_ZNF347_K562_ENCSR142MCA_profile_pattern_3.n_41-vs-ZNF347-201.alignment profile-znf_b1h_alignment/ZNF347-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF347-201/pos_patterns.ENCSR590FLL_ChIP_ZNF347_K562_ENCSR142MCA_profile_pattern_4.n_25-vs-ZNF347-201.alignment profile-znf_b1h_alignment/ZNF347-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF350-201/Hughes_GR_models_ZNF350_profile-pos.pattern_0.n_2038-vs-ZNF350-201.alignment profile-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF350-201/Hughes_GR_models_ZNF350_profile-pos.pattern_1.n_187-vs-ZNF350-201.alignment profile-znf_b1h_alignment/ZNF350-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_profile_pattern_10.n_294-vs-ZNF350-201.alignment profile-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_profile_pattern_11.n_256-vs-ZNF350-201.alignment profile-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_profile_pattern_12.n_251-vs-ZNF350-201.alignment profile-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_profile_pattern_13.n_227-vs-ZNF350-201.alignment profile-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_profile_pattern_14.n_158-vs-ZNF350-201.alignment profile-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_profile_pattern_15.n_143-vs-ZNF350-201.alignment profile-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_profile_pattern_16.n_131-vs-ZNF350-201.alignment profile-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_profile_pattern_17.n_108-vs-ZNF350-201.alignment profile-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_profile_pattern_18.n_106-vs-ZNF350-201.alignment profile-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_profile_pattern_19.n_98-vs-ZNF350-201.alignment profile-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_profile_pattern_1.n_2388-vs-ZNF350-201.alignment profile-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_profile_pattern_20.n_49-vs-ZNF350-201.alignment profile-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_profile_pattern_21.n_27-vs-ZNF350-201.alignment profile-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_profile_pattern_2.n_2315-vs-ZNF350-201.alignment profile-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_profile_pattern_3.n_1447-vs-ZNF350-201.alignment profile-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_profile_pattern_4.n_969-vs-ZNF350-201.alignment profile-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_profile_pattern_5.n_928-vs-ZNF350-201.alignment profile-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_profile_pattern_6.n_759-vs-ZNF350-201.alignment profile-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_profile_pattern_7.n_731-vs-ZNF350-201.alignment profile-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_profile_pattern_8.n_504-vs-ZNF350-201.alignment profile-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR842SRB_ChIP_ZNF350_HepG2_ENCSR424FUY_profile_pattern_9.n_457-vs-ZNF350-201.alignment profile-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR854ORP_ChIP_ZNF350_HEK293_ENCSR057YRV_profile_pattern_0.n_670-vs-ZNF350-201.alignment profile-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR854ORP_ChIP_ZNF350_HEK293_ENCSR057YRV_profile_pattern_1.n_618-vs-ZNF350-201.alignment profile-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR854ORP_ChIP_ZNF350_HEK293_ENCSR057YRV_profile_pattern_2.n_165-vs-ZNF350-201.alignment profile-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR854ORP_ChIP_ZNF350_HEK293_ENCSR057YRV_profile_pattern_3.n_55-vs-ZNF350-201.alignment profile-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR854ORP_ChIP_ZNF350_HEK293_ENCSR057YRV_profile_pattern_4.n_53-vs-ZNF350-201.alignment profile-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR854ORP_ChIP_ZNF350_HEK293_ENCSR057YRV_profile_pattern_5.n_46-vs-ZNF350-201.alignment profile-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR854ORP_ChIP_ZNF350_HEK293_ENCSR057YRV_profile_pattern_6.n_43-vs-ZNF350-201.alignment profile-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR854ORP_ChIP_ZNF350_HEK293_ENCSR057YRV_profile_pattern_7.n_42-vs-ZNF350-201.alignment profile-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR854ORP_ChIP_ZNF350_HEK293_ENCSR057YRV_profile_pattern_8.n_38-vs-ZNF350-201.alignment profile-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF350-201/pos_patterns.ENCSR854ORP_ChIP_ZNF350_HEK293_ENCSR057YRV_profile_pattern_9.n_32-vs-ZNF350-201.alignment profile-znf_b1h_alignment/ZNF350-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF35-201/Hughes_GR_models_ZNF35_profile-neg.pattern_0.n_354-vs-ZNF35-201.alignment profile-znf_b1h_alignment/ZNF35-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF35-201/Hughes_GR_models_ZNF35_profile-neg.pattern_10.n_48-vs-ZNF35-201.alignment profile-znf_b1h_alignment/ZNF35-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF35-201/Hughes_GR_models_ZNF35_profile-neg.pattern_11.n_46-vs-ZNF35-201.alignment profile-znf_b1h_alignment/ZNF35-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF35-201/Hughes_GR_models_ZNF35_profile-neg.pattern_13.n_43-vs-ZNF35-201.alignment profile-znf_b1h_alignment/ZNF35-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF35-201/Hughes_GR_models_ZNF35_profile-neg.pattern_14.n_42-vs-ZNF35-201.alignment profile-znf_b1h_alignment/ZNF35-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF354B-201/pos_patterns.ENCSR124QQJ_ChIP_ZNF354B_HepG2_ENCSR040RYM_profile_pattern_2.n_323-vs-ZNF354B-201.alignment profile-znf_b1h_alignment/ZNF354B-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF354C-201/pos_patterns.ENCSR506SSQ_ChIP_ZNF354C_K562_ENCSR664CJG_profile_pattern_15.n_56-vs-ZNF354C-201.alignment profile-znf_b1h_alignment/ZNF354C-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF37A-201/pos_patterns.ENCSR371LLY_ChIP_ZNF37A_HEK293_ENCSR668MDE_profile_pattern_0.n_460-vs-ZNF37A-201.alignment profile-znf_b1h_alignment/ZNF37A-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF37A-201/pos_patterns.ENCSR371LLY_ChIP_ZNF37A_HEK293_ENCSR668MDE_profile_pattern_2.n_151-vs-ZNF37A-201.alignment profile-znf_b1h_alignment/ZNF37A-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF37A-201/pos_patterns.ENCSR371LLY_ChIP_ZNF37A_HEK293_ENCSR668MDE_profile_pattern_6.n_81-vs-ZNF37A-201.alignment profile-znf_b1h_alignment/ZNF37A-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF382-201/ChipExo_models_ZNF382_profile-pos.pattern_0.n_8671-vs-ZNF382-201.alignment profile-znf_b1h_alignment/ZNF382-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF382-201/ChipExo_models_ZNF382_profile-pos.pattern_10.n_33-vs-ZNF382-201.alignment profile-znf_b1h_alignment/ZNF382-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF382-201/ChipExo_models_ZNF382_profile-pos.pattern_1.n_695-vs-ZNF382-201.alignment profile-znf_b1h_alignment/ZNF382-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF382-201/ChipExo_models_ZNF382_profile-pos.pattern_3.n_152-vs-ZNF382-201.alignment profile-znf_b1h_alignment/ZNF382-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF383-201/pos_patterns.ENCSR264LQX_ChIP_ZNF383_HepG2_ENCSR161OZI_profile_pattern_15.n_67-vs-ZNF383-201.alignment profile-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF383-201/pos_patterns.ENCSR264LQX_ChIP_ZNF383_HepG2_ENCSR161OZI_profile_pattern_16.n_61-vs-ZNF383-201.alignment profile-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF383-201/pos_patterns.ENCSR264LQX_ChIP_ZNF383_HepG2_ENCSR161OZI_profile_pattern_17.n_57-vs-ZNF383-201.alignment profile-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF383-201/pos_patterns.ENCSR264LQX_ChIP_ZNF383_HepG2_ENCSR161OZI_profile_pattern_18.n_52-vs-ZNF383-201.alignment profile-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF383-201/pos_patterns.ENCSR264LQX_ChIP_ZNF383_HepG2_ENCSR161OZI_profile_pattern_19.n_52-vs-ZNF383-201.alignment profile-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF383-201/pos_patterns.ENCSR264LQX_ChIP_ZNF383_HepG2_ENCSR161OZI_profile_pattern_1.n_737-vs-ZNF383-201.alignment profile-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF383-201/pos_patterns.ENCSR264LQX_ChIP_ZNF383_HepG2_ENCSR161OZI_profile_pattern_20.n_35-vs-ZNF383-201.alignment profile-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF383-201/pos_patterns.ENCSR264LQX_ChIP_ZNF383_HepG2_ENCSR161OZI_profile_pattern_21.n_32-vs-ZNF383-201.alignment profile-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF383-201/pos_patterns.ENCSR264LQX_ChIP_ZNF383_HepG2_ENCSR161OZI_profile_pattern_2.n_579-vs-ZNF383-201.alignment profile-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF383-201/pos_patterns.ENCSR264LQX_ChIP_ZNF383_HepG2_ENCSR161OZI_profile_pattern_3.n_484-vs-ZNF383-201.alignment profile-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF383-201/pos_patterns.ENCSR264LQX_ChIP_ZNF383_HepG2_ENCSR161OZI_profile_pattern_4.n_301-vs-ZNF383-201.alignment profile-znf_b1h_alignment/ZNF383-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF383-201/pos_patterns.ENCSR264LQX_ChIP_ZNF383_HepG2_ENCSR161OZI_profile_pattern_7.n_115-vs-ZNF383-201.alignment profile-znf_b1h_alignment/ZNF383-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF383-201/pos_patterns.ENCSR264LQX_ChIP_ZNF383_HepG2_ENCSR161OZI_profile_pattern_9.n_93-vs-ZNF383-201.alignment profile-znf_b1h_alignment/ZNF383-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/Hughes_GR_models_ZNF384_profile-neg.pattern_0.n_367-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/Hughes_GR_models_ZNF384_profile-neg.pattern_1.n_208-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/Hughes_GR_models_ZNF384_profile-neg.pattern_2.n_177-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/Hughes_GR_models_ZNF384_profile-neg.pattern_3.n_134-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/Hughes_GR_models_ZNF384_profile-neg.pattern_4.n_59-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/Hughes_GR_models_ZNF384_profile-neg.pattern_5.n_43-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/Hughes_GR_models_ZNF384_profile-neg.pattern_6.n_32-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/Hughes_GR_models_ZNF384_profile-pos.pattern_10.n_69-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/Hughes_GR_models_ZNF384_profile-pos.pattern_11.n_25-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/Hughes_GR_models_ZNF384_profile-pos.pattern_1.n_5462-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/Hughes_GR_models_ZNF384_profile-pos.pattern_2.n_4903-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/Hughes_GR_models_ZNF384_profile-pos.pattern_3.n_565-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/Hughes_GR_models_ZNF384_profile-pos.pattern_4.n_500-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/Hughes_GR_models_ZNF384_profile-pos.pattern_5.n_281-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/Hughes_GR_models_ZNF384_profile-pos.pattern_6.n_136-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/Hughes_GR_models_ZNF384_profile-pos.pattern_7.n_132-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/Hughes_GR_models_ZNF384_profile-pos.pattern_8.n_131-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/Hughes_GR_models_ZNF384_profile-pos.pattern_9.n_89-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_0.n_1037-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_10.n_92-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_11.n_89-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_12.n_87-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_13.n_77-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_14.n_73-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_15.n_64-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_16.n_63-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_17.n_46-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_18.n_40-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_19.n_30-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_1.n_313-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_20.n_30-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_21.n_25-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_22.n_21-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_2.n_283-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_3.n_253-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_4.n_149-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_5.n_137-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_6.n_136-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_7.n_127-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_8.n_122-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_9.n_94-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_0.n_868-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_10.n_69-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_11.n_69-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_12.n_69-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_13.n_58-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_14.n_51-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_15.n_44-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_16.n_43-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_17.n_41-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_18.n_30-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_19.n_25-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_1.n_772-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_2.n_483-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_3.n_305-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_4.n_290-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_5.n_248-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_6.n_141-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_7.n_109-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_8.n_102-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_9.n_85-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_0.n_629-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_10.n_90-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_11.n_88-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_12.n_65-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_13.n_61-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_14.n_51-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_15.n_35-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_16.n_35-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_17.n_30-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_18.n_29-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_1.n_504-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_2.n_332-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_3.n_302-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_4.n_211-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_5.n_137-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_6.n_135-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_7.n_120-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_8.n_116-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_9.n_109-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_profile_pattern_0.n_88-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_profile_pattern_1.n_79-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_profile_pattern_2.n_53-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_profile_pattern_3.n_42-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_profile_pattern_4.n_42-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_profile_pattern_5.n_35-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_profile_pattern_6.n_32-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_profile_pattern_7.n_26-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/neg_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_profile_pattern_8.n_26-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_0.n_7012-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_10.n_381-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_11.n_230-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_12.n_147-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_13.n_139-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_14.n_89-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_15.n_82-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_16.n_58-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_17.n_51-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_18.n_41-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_19.n_36-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_1.n_2441-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_20.n_32-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_21.n_22-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_22.n_22-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_2.n_2316-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_3.n_2213-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_4.n_990-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_5.n_800-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_6.n_774-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_7.n_755-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_8.n_691-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_9.n_680-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_0.n_8814-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_10.n_502-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_11.n_487-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_12.n_305-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_13.n_285-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_14.n_272-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_15.n_207-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_16.n_166-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_17.n_97-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_18.n_82-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_19.n_70-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_1.n_4331-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_20.n_48-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_21.n_35-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_22.n_25-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_2.n_2274-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_3.n_2031-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_4.n_1811-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_5.n_1564-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_6.n_789-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_7.n_720-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_8.n_578-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_9.n_560-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_0.n_7973-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_10.n_469-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_11.n_394-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_12.n_363-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_13.n_265-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_14.n_207-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_15.n_205-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_16.n_135-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_17.n_130-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_18.n_80-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_19.n_68-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_1.n_3418-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_20.n_61-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_21.n_59-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_22.n_58-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_23.n_58-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_24.n_56-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_25.n_33-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_26.n_32-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_27.n_31-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_28.n_30-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_29.n_28-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_2.n_2692-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_30.n_27-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_31.n_22-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_3.n_2541-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_4.n_1830-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_5.n_1261-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_6.n_1106-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_7.n_955-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_8.n_805-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_9.n_656-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_profile_pattern_0.n_9072-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_profile_pattern_10.n_38-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_profile_pattern_11.n_25-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_profile_pattern_1.n_3586-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_profile_pattern_2.n_2505-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_profile_pattern_3.n_810-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_profile_pattern_4.n_349-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_profile_pattern_5.n_244-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_profile_pattern_6.n_198-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_profile_pattern_7.n_94-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_profile_pattern_8.n_62-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-201/pos_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_profile_pattern_9.n_55-vs-ZNF384-201.alignment profile-znf_b1h_alignment/ZNF384-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/Hughes_GR_models_ZNF384_profile-neg.pattern_0.n_367-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/Hughes_GR_models_ZNF384_profile-neg.pattern_1.n_208-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/Hughes_GR_models_ZNF384_profile-neg.pattern_2.n_177-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/Hughes_GR_models_ZNF384_profile-neg.pattern_3.n_134-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/Hughes_GR_models_ZNF384_profile-neg.pattern_4.n_59-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/Hughes_GR_models_ZNF384_profile-neg.pattern_5.n_43-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/Hughes_GR_models_ZNF384_profile-neg.pattern_6.n_32-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/Hughes_GR_models_ZNF384_profile-pos.pattern_0.n_5524-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/Hughes_GR_models_ZNF384_profile-pos.pattern_10.n_69-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/Hughes_GR_models_ZNF384_profile-pos.pattern_11.n_25-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/Hughes_GR_models_ZNF384_profile-pos.pattern_1.n_5462-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/Hughes_GR_models_ZNF384_profile-pos.pattern_2.n_4903-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/Hughes_GR_models_ZNF384_profile-pos.pattern_3.n_565-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/Hughes_GR_models_ZNF384_profile-pos.pattern_4.n_500-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/Hughes_GR_models_ZNF384_profile-pos.pattern_5.n_281-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/Hughes_GR_models_ZNF384_profile-pos.pattern_6.n_136-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/Hughes_GR_models_ZNF384_profile-pos.pattern_7.n_132-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/Hughes_GR_models_ZNF384_profile-pos.pattern_8.n_131-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/Hughes_GR_models_ZNF384_profile-pos.pattern_9.n_89-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_0.n_1037-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_10.n_92-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_11.n_89-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_12.n_87-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_13.n_77-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_14.n_73-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_15.n_64-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_16.n_63-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_17.n_46-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_18.n_40-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_19.n_30-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_1.n_313-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_20.n_30-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_21.n_25-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_22.n_21-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR000DYP_ChIP_ZNF384_GM12878_ENCSR607ZHJ_profile_pattern_2.n_283-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_4.n_290-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_5.n_248-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_6.n_141-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_7.n_109-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_8.n_102-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_9.n_85-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_0.n_629-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_10.n_90-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_11.n_88-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_12.n_65-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_13.n_61-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_14.n_51-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_15.n_35-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_16.n_35-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_17.n_30-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_18.n_29-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_1.n_504-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_2.n_332-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_3.n_302-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_4.n_211-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_5.n_137-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_6.n_135-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_7.n_120-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_8.n_116-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_9.n_109-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_profile_pattern_0.n_88-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_profile_pattern_1.n_79-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_profile_pattern_2.n_53-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_profile_pattern_3.n_42-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_profile_pattern_4.n_42-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_profile_pattern_5.n_35-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_profile_pattern_6.n_32-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/neg_patterns.ENCSR882ICT_ChIP_ZNF384_HEK293T_ENCSR589ELT_profile_pattern_8.n_26-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_14.n_272-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_15.n_207-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_16.n_166-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_17.n_97-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_18.n_82-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_19.n_70-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_20.n_48-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_21.n_35-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_22.n_25-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_2.n_2274-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_3.n_2031-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_4.n_1811-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_5.n_1564-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_6.n_789-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_7.n_720-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_8.n_578-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR000EFP_ChIP_ZNF384_K562_ENCSR860AZD_profile_pattern_9.n_560-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_0.n_7973-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_10.n_469-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_11.n_394-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_12.n_363-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_13.n_265-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_14.n_207-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_15.n_205-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF384-203/pos_patterns.ENCSR101FJU_ChIP_ZNF384_HepG2_ENCSR186EZI_profile_pattern_16.n_135-vs-ZNF384-203.alignment profile-znf_b1h_alignment/ZNF384-203/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF395-201/pos_patterns.ENCSR462QZZ_ChIP_ZNF395_K562_ENCSR605ZPT_profile_pattern_17.n_183-vs-ZNF395-201.alignment profile-znf_b1h_alignment/ZNF395-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF395-201/pos_patterns.ENCSR462QZZ_ChIP_ZNF395_K562_ENCSR605ZPT_profile_pattern_18.n_168-vs-ZNF395-201.alignment profile-znf_b1h_alignment/ZNF395-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF395-201/pos_patterns.ENCSR462QZZ_ChIP_ZNF395_K562_ENCSR605ZPT_profile_pattern_19.n_167-vs-ZNF395-201.alignment profile-znf_b1h_alignment/ZNF395-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF395-201/pos_patterns.ENCSR462QZZ_ChIP_ZNF395_K562_ENCSR605ZPT_profile_pattern_1.n_2309-vs-ZNF395-201.alignment profile-znf_b1h_alignment/ZNF395-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF395-201/pos_patterns.ENCSR462QZZ_ChIP_ZNF395_K562_ENCSR605ZPT_profile_pattern_20.n_157-vs-ZNF395-201.alignment profile-znf_b1h_alignment/ZNF395-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF397-202/pos_patterns.ENCSR508EEX_ChIP_ZNF397_K562_ENCSR644KWQ_profile_pattern_1.n_473-vs-ZNF397-202.alignment profile-znf_b1h_alignment/ZNF397-202/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF397-202/pos_patterns.ENCSR508EEX_ChIP_ZNF397_K562_ENCSR644KWQ_profile_pattern_3.n_66-vs-ZNF397-202.alignment profile-znf_b1h_alignment/ZNF397-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF397-202/pos_patterns.ENCSR508EEX_ChIP_ZNF397_K562_ENCSR644KWQ_profile_pattern_4.n_60-vs-ZNF397-202.alignment profile-znf_b1h_alignment/ZNF397-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF397-202/pos_patterns.ENCSR508EEX_ChIP_ZNF397_K562_ENCSR644KWQ_profile_pattern_5.n_48-vs-ZNF397-202.alignment profile-znf_b1h_alignment/ZNF397-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF397-202/pos_patterns.ENCSR508EEX_ChIP_ZNF397_K562_ENCSR644KWQ_profile_pattern_6.n_41-vs-ZNF397-202.alignment profile-znf_b1h_alignment/ZNF397-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF397-202/pos_patterns.ENCSR508EEX_ChIP_ZNF397_K562_ENCSR644KWQ_profile_pattern_7.n_41-vs-ZNF397-202.alignment profile-znf_b1h_alignment/ZNF397-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF397-202/pos_patterns.ENCSR508EEX_ChIP_ZNF397_K562_ENCSR644KWQ_profile_pattern_8.n_39-vs-ZNF397-202.alignment profile-znf_b1h_alignment/ZNF397-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF397-202/pos_patterns.ENCSR508EEX_ChIP_ZNF397_K562_ENCSR644KWQ_profile_pattern_9.n_33-vs-ZNF397-202.alignment profile-znf_b1h_alignment/ZNF397-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF398-202/ChipExo_models_ZNF398_profile-pos.pattern_0.n_794-vs-ZNF398-202.alignment profile-znf_b1h_alignment/ZNF398-202/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF407-201/pos_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_profile_pattern_1.n_975-vs-ZNF407-201.alignment profile-znf_b1h_alignment/ZNF407-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF407-201/pos_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_profile_pattern_3.n_223-vs-ZNF407-201.alignment profile-znf_b1h_alignment/ZNF407-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF407-201/pos_patterns.ENCSR005WGY_ChIP_ZNF407_HepG2_ENCSR992ZAX_profile_pattern_9.n_26-vs-ZNF407-201.alignment profile-znf_b1h_alignment/ZNF407-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF407-201/pos_patterns.ENCSR011NOZ_ChIP_ZNF407_K562_ENCSR723BLF_profile_pattern_1.n_247-vs-ZNF407-201.alignment profile-znf_b1h_alignment/ZNF407-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF407-201/pos_patterns.ENCSR011NOZ_ChIP_ZNF407_K562_ENCSR723BLF_profile_pattern_2.n_137-vs-ZNF407-201.alignment profile-znf_b1h_alignment/ZNF407-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF407-201/pos_patterns.ENCSR011NOZ_ChIP_ZNF407_K562_ENCSR723BLF_profile_pattern_3.n_132-vs-ZNF407-201.alignment profile-znf_b1h_alignment/ZNF407-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF407-201/pos_patterns.ENCSR011NOZ_ChIP_ZNF407_K562_ENCSR723BLF_profile_pattern_4.n_120-vs-ZNF407-201.alignment profile-znf_b1h_alignment/ZNF407-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF414-202/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_profile_pattern_13.n_203-vs-ZNF414-202.alignment profile-znf_b1h_alignment/ZNF414-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF414-202/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_profile_pattern_14.n_198-vs-ZNF414-202.alignment profile-znf_b1h_alignment/ZNF414-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF414-202/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_profile_pattern_15.n_183-vs-ZNF414-202.alignment profile-znf_b1h_alignment/ZNF414-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF414-202/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_profile_pattern_16.n_159-vs-ZNF414-202.alignment profile-znf_b1h_alignment/ZNF414-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF414-202/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_profile_pattern_17.n_159-vs-ZNF414-202.alignment profile-znf_b1h_alignment/ZNF414-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF414-202/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_profile_pattern_18.n_145-vs-ZNF414-202.alignment profile-znf_b1h_alignment/ZNF414-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF414-202/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_profile_pattern_19.n_138-vs-ZNF414-202.alignment profile-znf_b1h_alignment/ZNF414-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF414-202/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_profile_pattern_1.n_1564-vs-ZNF414-202.alignment profile-znf_b1h_alignment/ZNF414-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF414-202/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_profile_pattern_20.n_95-vs-ZNF414-202.alignment profile-znf_b1h_alignment/ZNF414-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF414-202/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_profile_pattern_21.n_86-vs-ZNF414-202.alignment profile-znf_b1h_alignment/ZNF414-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF414-202/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_profile_pattern_22.n_78-vs-ZNF414-202.alignment profile-znf_b1h_alignment/ZNF414-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF414-202/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_profile_pattern_23.n_48-vs-ZNF414-202.alignment profile-znf_b1h_alignment/ZNF414-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF414-202/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_profile_pattern_24.n_36-vs-ZNF414-202.alignment profile-znf_b1h_alignment/ZNF414-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF414-202/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_profile_pattern_2.n_996-vs-ZNF414-202.alignment profile-znf_b1h_alignment/ZNF414-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF414-202/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_profile_pattern_3.n_726-vs-ZNF414-202.alignment profile-znf_b1h_alignment/ZNF414-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF414-202/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_profile_pattern_4.n_598-vs-ZNF414-202.alignment profile-znf_b1h_alignment/ZNF414-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF414-202/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_profile_pattern_5.n_578-vs-ZNF414-202.alignment profile-znf_b1h_alignment/ZNF414-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF414-202/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_profile_pattern_6.n_498-vs-ZNF414-202.alignment profile-znf_b1h_alignment/ZNF414-202/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF414-202/pos_patterns.ENCSR224NQI_ChIP_ZNF414_HepG2_ENCSR233SGM_profile_pattern_8.n_401-vs-ZNF414-202.alignment profile-znf_b1h_alignment/ZNF414-202/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF416-201/pos_patterns.ENCSR288NNJ_ChIP_ZNF416_WTC11_ENCSR094YJY_profile_pattern_1.n_249-vs-ZNF416-201.alignment profile-znf_b1h_alignment/ZNF416-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF423-201/pos_patterns.ENCSR413CVQ_ChIP_ZNF423_WTC11_ENCSR148KSW_profile_pattern_7.n_34-vs-ZNF423-201.alignment profile-znf_b1h_alignment/ZNF423-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF423-201/pos_patterns.ENCSR413CVQ_ChIP_ZNF423_WTC11_ENCSR148KSW_profile_pattern_8.n_26-vs-ZNF423-201.alignment profile-znf_b1h_alignment/ZNF423-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF423-201/pos_patterns.ENCSR477OJI_ChIP_ZNF423_HEK293_ENCSR286FWU_profile_pattern_0.n_4466-vs-ZNF423-201.alignment profile-znf_b1h_alignment/ZNF423-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF423-201/pos_patterns.ENCSR477OJI_ChIP_ZNF423_HEK293_ENCSR286FWU_profile_pattern_1.n_2054-vs-ZNF423-201.alignment profile-znf_b1h_alignment/ZNF423-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF423-201/pos_patterns.ENCSR477OJI_ChIP_ZNF423_HEK293_ENCSR286FWU_profile_pattern_2.n_111-vs-ZNF423-201.alignment profile-znf_b1h_alignment/ZNF423-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF423-201/pos_patterns.ENCSR477OJI_ChIP_ZNF423_HEK293_ENCSR286FWU_profile_pattern_3.n_110-vs-ZNF423-201.alignment profile-znf_b1h_alignment/ZNF423-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF423-201/pos_patterns.ENCSR477OJI_ChIP_ZNF423_HEK293_ENCSR286FWU_profile_pattern_4.n_66-vs-ZNF423-201.alignment profile-znf_b1h_alignment/ZNF423-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF423-201/pos_patterns.ENCSR477OJI_ChIP_ZNF423_HEK293_ENCSR286FWU_profile_pattern_5.n_57-vs-ZNF423-201.alignment profile-znf_b1h_alignment/ZNF423-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF423-201/pos_patterns.ENCSR477OJI_ChIP_ZNF423_HEK293_ENCSR286FWU_profile_pattern_6.n_57-vs-ZNF423-201.alignment profile-znf_b1h_alignment/ZNF423-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF423-201/pos_patterns.ENCSR477OJI_ChIP_ZNF423_HEK293_ENCSR286FWU_profile_pattern_7.n_48-vs-ZNF423-201.alignment profile-znf_b1h_alignment/ZNF423-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF423-201/pos_patterns.ENCSR477OJI_ChIP_ZNF423_HEK293_ENCSR286FWU_profile_pattern_8.n_33-vs-ZNF423-201.alignment profile-znf_b1h_alignment/ZNF423-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF423-201/pos_patterns.ENCSR477OJI_ChIP_ZNF423_HEK293_ENCSR286FWU_profile_pattern_9.n_23-vs-ZNF423-201.alignment profile-znf_b1h_alignment/ZNF423-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF423-202/pos_patterns.ENCSR413CVQ_ChIP_ZNF423_WTC11_ENCSR148KSW_profile_pattern_0.n_14589-vs-ZNF423-202.alignment profile-znf_b1h_alignment/ZNF423-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF423-202/pos_patterns.ENCSR413CVQ_ChIP_ZNF423_WTC11_ENCSR148KSW_profile_pattern_1.n_101-vs-ZNF423-202.alignment profile-znf_b1h_alignment/ZNF423-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF423-202/pos_patterns.ENCSR413CVQ_ChIP_ZNF423_WTC11_ENCSR148KSW_profile_pattern_2.n_84-vs-ZNF423-202.alignment profile-znf_b1h_alignment/ZNF423-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF423-202/pos_patterns.ENCSR413CVQ_ChIP_ZNF423_WTC11_ENCSR148KSW_profile_pattern_3.n_54-vs-ZNF423-202.alignment profile-znf_b1h_alignment/ZNF423-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF423-202/pos_patterns.ENCSR413CVQ_ChIP_ZNF423_WTC11_ENCSR148KSW_profile_pattern_4.n_40-vs-ZNF423-202.alignment profile-znf_b1h_alignment/ZNF423-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF423-202/pos_patterns.ENCSR413CVQ_ChIP_ZNF423_WTC11_ENCSR148KSW_profile_pattern_5.n_38-vs-ZNF423-202.alignment profile-znf_b1h_alignment/ZNF423-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF423-202/pos_patterns.ENCSR413CVQ_ChIP_ZNF423_WTC11_ENCSR148KSW_profile_pattern_6.n_34-vs-ZNF423-202.alignment profile-znf_b1h_alignment/ZNF423-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF423-202/pos_patterns.ENCSR413CVQ_ChIP_ZNF423_WTC11_ENCSR148KSW_profile_pattern_7.n_34-vs-ZNF423-202.alignment profile-znf_b1h_alignment/ZNF423-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF423-202/pos_patterns.ENCSR413CVQ_ChIP_ZNF423_WTC11_ENCSR148KSW_profile_pattern_8.n_26-vs-ZNF423-202.alignment profile-znf_b1h_alignment/ZNF423-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF423-202/pos_patterns.ENCSR477OJI_ChIP_ZNF423_HEK293_ENCSR286FWU_profile_pattern_0.n_4466-vs-ZNF423-202.alignment profile-znf_b1h_alignment/ZNF423-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF423-202/pos_patterns.ENCSR477OJI_ChIP_ZNF423_HEK293_ENCSR286FWU_profile_pattern_1.n_2054-vs-ZNF423-202.alignment profile-znf_b1h_alignment/ZNF423-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF423-202/pos_patterns.ENCSR477OJI_ChIP_ZNF423_HEK293_ENCSR286FWU_profile_pattern_2.n_111-vs-ZNF423-202.alignment profile-znf_b1h_alignment/ZNF423-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF423-202/pos_patterns.ENCSR477OJI_ChIP_ZNF423_HEK293_ENCSR286FWU_profile_pattern_3.n_110-vs-ZNF423-202.alignment profile-znf_b1h_alignment/ZNF423-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF423-202/pos_patterns.ENCSR477OJI_ChIP_ZNF423_HEK293_ENCSR286FWU_profile_pattern_4.n_66-vs-ZNF423-202.alignment profile-znf_b1h_alignment/ZNF423-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF423-202/pos_patterns.ENCSR477OJI_ChIP_ZNF423_HEK293_ENCSR286FWU_profile_pattern_5.n_57-vs-ZNF423-202.alignment profile-znf_b1h_alignment/ZNF423-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF423-202/pos_patterns.ENCSR477OJI_ChIP_ZNF423_HEK293_ENCSR286FWU_profile_pattern_6.n_57-vs-ZNF423-202.alignment profile-znf_b1h_alignment/ZNF423-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF423-202/pos_patterns.ENCSR477OJI_ChIP_ZNF423_HEK293_ENCSR286FWU_profile_pattern_7.n_48-vs-ZNF423-202.alignment profile-znf_b1h_alignment/ZNF423-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF423-202/pos_patterns.ENCSR477OJI_ChIP_ZNF423_HEK293_ENCSR286FWU_profile_pattern_8.n_33-vs-ZNF423-202.alignment profile-znf_b1h_alignment/ZNF423-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF423-202/pos_patterns.ENCSR477OJI_ChIP_ZNF423_HEK293_ENCSR286FWU_profile_pattern_9.n_23-vs-ZNF423-202.alignment profile-znf_b1h_alignment/ZNF423-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF425-201/ChipExo_models_ZNF425_profile-pos.pattern_0.n_1744-vs-ZNF425-201.alignment profile-znf_b1h_alignment/ZNF425-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF425-201/ChipExo_models_ZNF425_profile-pos.pattern_1.n_1456-vs-ZNF425-201.alignment profile-znf_b1h_alignment/ZNF425-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF425-201/ChipExo_models_ZNF425_profile-pos.pattern_2.n_160-vs-ZNF425-201.alignment profile-znf_b1h_alignment/ZNF425-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF425-201/ChipExo_models_ZNF425_profile-pos.pattern_3.n_152-vs-ZNF425-201.alignment profile-znf_b1h_alignment/ZNF425-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF425-201/ChipExo_models_ZNF425_profile-pos.pattern_4.n_116-vs-ZNF425-201.alignment profile-znf_b1h_alignment/ZNF425-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF425-201/ChipExo_models_ZNF425_profile-pos.pattern_5.n_83-vs-ZNF425-201.alignment profile-znf_b1h_alignment/ZNF425-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF425-201/neg_patterns.ENCSR717QWW_ChIP_ZNF425_WTC11_ENCSR893YXI_profile_pattern_0.n_125-vs-ZNF425-201.alignment profile-znf_b1h_alignment/ZNF425-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF425-201/neg_patterns.ENCSR717QWW_ChIP_ZNF425_WTC11_ENCSR893YXI_profile_pattern_1.n_71-vs-ZNF425-201.alignment profile-znf_b1h_alignment/ZNF425-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF425-201/neg_patterns.ENCSR717QWW_ChIP_ZNF425_WTC11_ENCSR893YXI_profile_pattern_2.n_33-vs-ZNF425-201.alignment profile-znf_b1h_alignment/ZNF425-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF425-201/neg_patterns.ENCSR717QWW_ChIP_ZNF425_WTC11_ENCSR893YXI_profile_pattern_3.n_30-vs-ZNF425-201.alignment profile-znf_b1h_alignment/ZNF425-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF425-201/neg_patterns.ENCSR717QWW_ChIP_ZNF425_WTC11_ENCSR893YXI_profile_pattern_4.n_29-vs-ZNF425-201.alignment profile-znf_b1h_alignment/ZNF425-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF425-201/neg_patterns.ENCSR717QWW_ChIP_ZNF425_WTC11_ENCSR893YXI_profile_pattern_5.n_26-vs-ZNF425-201.alignment profile-znf_b1h_alignment/ZNF425-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF425-201/pos_patterns.ENCSR717QWW_ChIP_ZNF425_WTC11_ENCSR893YXI_profile_pattern_0.n_115-vs-ZNF425-201.alignment profile-znf_b1h_alignment/ZNF425-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF425-201/pos_patterns.ENCSR717QWW_ChIP_ZNF425_WTC11_ENCSR893YXI_profile_pattern_10.n_20-vs-ZNF425-201.alignment profile-znf_b1h_alignment/ZNF425-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF425-201/pos_patterns.ENCSR717QWW_ChIP_ZNF425_WTC11_ENCSR893YXI_profile_pattern_1.n_109-vs-ZNF425-201.alignment profile-znf_b1h_alignment/ZNF425-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF425-201/pos_patterns.ENCSR717QWW_ChIP_ZNF425_WTC11_ENCSR893YXI_profile_pattern_2.n_60-vs-ZNF425-201.alignment profile-znf_b1h_alignment/ZNF425-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF425-201/pos_patterns.ENCSR717QWW_ChIP_ZNF425_WTC11_ENCSR893YXI_profile_pattern_3.n_56-vs-ZNF425-201.alignment profile-znf_b1h_alignment/ZNF425-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF425-201/pos_patterns.ENCSR717QWW_ChIP_ZNF425_WTC11_ENCSR893YXI_profile_pattern_4.n_54-vs-ZNF425-201.alignment profile-znf_b1h_alignment/ZNF425-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF425-201/pos_patterns.ENCSR717QWW_ChIP_ZNF425_WTC11_ENCSR893YXI_profile_pattern_5.n_54-vs-ZNF425-201.alignment profile-znf_b1h_alignment/ZNF425-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF425-201/pos_patterns.ENCSR717QWW_ChIP_ZNF425_WTC11_ENCSR893YXI_profile_pattern_6.n_52-vs-ZNF425-201.alignment profile-znf_b1h_alignment/ZNF425-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF425-201/pos_patterns.ENCSR717QWW_ChIP_ZNF425_WTC11_ENCSR893YXI_profile_pattern_7.n_49-vs-ZNF425-201.alignment profile-znf_b1h_alignment/ZNF425-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF425-201/pos_patterns.ENCSR717QWW_ChIP_ZNF425_WTC11_ENCSR893YXI_profile_pattern_8.n_46-vs-ZNF425-201.alignment profile-znf_b1h_alignment/ZNF425-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF425-201/pos_patterns.ENCSR717QWW_ChIP_ZNF425_WTC11_ENCSR893YXI_profile_pattern_9.n_28-vs-ZNF425-201.alignment profile-znf_b1h_alignment/ZNF425-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF426-201/neg_patterns.ENCSR224NFP_ChIP_ZNF426_HEK293_ENCSR841VYM_profile_pattern_0.n_710-vs-ZNF426-201.alignment profile-znf_b1h_alignment/ZNF426-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF426-201/neg_patterns.ENCSR224NFP_ChIP_ZNF426_HEK293_ENCSR841VYM_profile_pattern_1.n_27-vs-ZNF426-201.alignment profile-znf_b1h_alignment/ZNF426-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF426-201/neg_patterns.ENCSR224NFP_ChIP_ZNF426_HEK293_ENCSR841VYM_profile_pattern_2.n_24-vs-ZNF426-201.alignment profile-znf_b1h_alignment/ZNF426-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF426-201/pos_patterns.ENCSR224NFP_ChIP_ZNF426_HEK293_ENCSR841VYM_profile_pattern_0.n_9355-vs-ZNF426-201.alignment profile-znf_b1h_alignment/ZNF426-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF426-201/pos_patterns.ENCSR224NFP_ChIP_ZNF426_HEK293_ENCSR841VYM_profile_pattern_1.n_348-vs-ZNF426-201.alignment profile-znf_b1h_alignment/ZNF426-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF426-201/pos_patterns.ENCSR224NFP_ChIP_ZNF426_HEK293_ENCSR841VYM_profile_pattern_2.n_210-vs-ZNF426-201.alignment profile-znf_b1h_alignment/ZNF426-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF426-201/pos_patterns.ENCSR224NFP_ChIP_ZNF426_HEK293_ENCSR841VYM_profile_pattern_3.n_25-vs-ZNF426-201.alignment profile-znf_b1h_alignment/ZNF426-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF429-201/ChipExo_models_ZNF429_profile-pos.pattern_0.n_5862-vs-ZNF429-201.alignment profile-znf_b1h_alignment/ZNF429-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF429-201/ChipExo_models_ZNF429_profile-pos.pattern_10.n_41-vs-ZNF429-201.alignment profile-znf_b1h_alignment/ZNF429-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF429-201/ChipExo_models_ZNF429_profile-pos.pattern_11.n_36-vs-ZNF429-201.alignment profile-znf_b1h_alignment/ZNF429-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF429-201/ChipExo_models_ZNF429_profile-pos.pattern_12.n_31-vs-ZNF429-201.alignment profile-znf_b1h_alignment/ZNF429-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF429-201/ChipExo_models_ZNF429_profile-pos.pattern_1.n_802-vs-ZNF429-201.alignment profile-znf_b1h_alignment/ZNF429-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF429-201/ChipExo_models_ZNF429_profile-pos.pattern_2.n_381-vs-ZNF429-201.alignment profile-znf_b1h_alignment/ZNF429-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF429-201/ChipExo_models_ZNF429_profile-pos.pattern_3.n_345-vs-ZNF429-201.alignment profile-znf_b1h_alignment/ZNF429-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF429-201/ChipExo_models_ZNF429_profile-pos.pattern_4.n_254-vs-ZNF429-201.alignment profile-znf_b1h_alignment/ZNF429-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF429-201/ChipExo_models_ZNF429_profile-pos.pattern_5.n_225-vs-ZNF429-201.alignment profile-znf_b1h_alignment/ZNF429-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF429-201/ChipExo_models_ZNF429_profile-pos.pattern_6.n_125-vs-ZNF429-201.alignment profile-znf_b1h_alignment/ZNF429-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF429-201/ChipExo_models_ZNF429_profile-pos.pattern_7.n_92-vs-ZNF429-201.alignment profile-znf_b1h_alignment/ZNF429-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF429-201/ChipExo_models_ZNF429_profile-pos.pattern_8.n_59-vs-ZNF429-201.alignment profile-znf_b1h_alignment/ZNF429-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF429-201/ChipExo_models_ZNF429_profile-pos.pattern_9.n_44-vs-ZNF429-201.alignment profile-znf_b1h_alignment/ZNF429-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF430-201/ChipExo_models_ZNF430_profile-pos.pattern_0.n_795-vs-ZNF430-201.alignment profile-znf_b1h_alignment/ZNF430-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF430-201/ChipExo_models_ZNF430_profile-pos.pattern_1.n_95-vs-ZNF430-201.alignment profile-znf_b1h_alignment/ZNF430-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF430-201/ChipExo_models_ZNF430_profile-pos.pattern_2.n_86-vs-ZNF430-201.alignment profile-znf_b1h_alignment/ZNF430-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF430-201/ChipExo_models_ZNF430_profile-pos.pattern_3.n_62-vs-ZNF430-201.alignment profile-znf_b1h_alignment/ZNF430-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF430-201/ChipExo_models_ZNF430_profile-pos.pattern_4.n_48-vs-ZNF430-201.alignment profile-znf_b1h_alignment/ZNF430-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF430-201/ChipExo_models_ZNF430_profile-pos.pattern_5.n_31-vs-ZNF430-201.alignment profile-znf_b1h_alignment/ZNF430-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF430-201/neg_patterns.ENCSR618END_ChIP_ZNF430_HepG2_ENCSR278QPL_profile_pattern_0.n_175-vs-ZNF430-201.alignment profile-znf_b1h_alignment/ZNF430-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF430-201/neg_patterns.ENCSR618END_ChIP_ZNF430_HepG2_ENCSR278QPL_profile_pattern_1.n_118-vs-ZNF430-201.alignment profile-znf_b1h_alignment/ZNF430-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF430-201/neg_patterns.ENCSR618END_ChIP_ZNF430_HepG2_ENCSR278QPL_profile_pattern_2.n_88-vs-ZNF430-201.alignment profile-znf_b1h_alignment/ZNF430-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF430-201/neg_patterns.ENCSR618END_ChIP_ZNF430_HepG2_ENCSR278QPL_profile_pattern_3.n_82-vs-ZNF430-201.alignment profile-znf_b1h_alignment/ZNF430-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF430-201/neg_patterns.ENCSR618END_ChIP_ZNF430_HepG2_ENCSR278QPL_profile_pattern_4.n_49-vs-ZNF430-201.alignment profile-znf_b1h_alignment/ZNF430-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF430-201/neg_patterns.ENCSR618END_ChIP_ZNF430_HepG2_ENCSR278QPL_profile_pattern_5.n_41-vs-ZNF430-201.alignment profile-znf_b1h_alignment/ZNF430-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF430-201/neg_patterns.ENCSR618END_ChIP_ZNF430_HepG2_ENCSR278QPL_profile_pattern_6.n_31-vs-ZNF430-201.alignment profile-znf_b1h_alignment/ZNF430-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF430-201/neg_patterns.ENCSR618END_ChIP_ZNF430_HepG2_ENCSR278QPL_profile_pattern_7.n_27-vs-ZNF430-201.alignment profile-znf_b1h_alignment/ZNF430-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF430-201/neg_patterns.ENCSR618END_ChIP_ZNF430_HepG2_ENCSR278QPL_profile_pattern_8.n_23-vs-ZNF430-201.alignment profile-znf_b1h_alignment/ZNF430-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF430-201/neg_patterns.ENCSR618END_ChIP_ZNF430_HepG2_ENCSR278QPL_profile_pattern_9.n_20-vs-ZNF430-201.alignment profile-znf_b1h_alignment/ZNF430-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF430-201/pos_patterns.ENCSR618END_ChIP_ZNF430_HepG2_ENCSR278QPL_profile_pattern_0.n_2959-vs-ZNF430-201.alignment profile-znf_b1h_alignment/ZNF430-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF430-201/pos_patterns.ENCSR618END_ChIP_ZNF430_HepG2_ENCSR278QPL_profile_pattern_7.n_379-vs-ZNF430-201.alignment profile-znf_b1h_alignment/ZNF430-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF430-201/pos_patterns.ENCSR618END_ChIP_ZNF430_HepG2_ENCSR278QPL_profile_pattern_8.n_365-vs-ZNF430-201.alignment profile-znf_b1h_alignment/ZNF430-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF430-201/pos_patterns.ENCSR618END_ChIP_ZNF430_HepG2_ENCSR278QPL_profile_pattern_9.n_309-vs-ZNF430-201.alignment profile-znf_b1h_alignment/ZNF430-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF431-201/ChipExo_models_ZNF431_profile-pos.pattern_0.n_175-vs-ZNF431-201.alignment profile-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF431-201/ChipExo_models_ZNF431_profile-pos.pattern_1.n_77-vs-ZNF431-201.alignment profile-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF431-201/ChipExo_models_ZNF431_profile-pos.pattern_2.n_40-vs-ZNF431-201.alignment profile-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF431-201/ChipExo_models_ZNF431_profile-pos.pattern_3.n_36-vs-ZNF431-201.alignment profile-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF431-201/neg_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_profile_pattern_0.n_632-vs-ZNF431-201.alignment profile-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF431-201/neg_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_profile_pattern_10.n_63-vs-ZNF431-201.alignment profile-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF431-201/neg_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_profile_pattern_11.n_53-vs-ZNF431-201.alignment profile-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF431-201/neg_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_profile_pattern_12.n_47-vs-ZNF431-201.alignment profile-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF431-201/neg_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_profile_pattern_13.n_41-vs-ZNF431-201.alignment profile-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF431-201/neg_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_profile_pattern_14.n_40-vs-ZNF431-201.alignment profile-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF431-201/neg_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_profile_pattern_15.n_28-vs-ZNF431-201.alignment profile-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF431-201/neg_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_profile_pattern_16.n_27-vs-ZNF431-201.alignment profile-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF431-201/neg_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_profile_pattern_17.n_23-vs-ZNF431-201.alignment profile-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF431-201/neg_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_profile_pattern_18.n_22-vs-ZNF431-201.alignment profile-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF431-201/neg_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_profile_pattern_19.n_20-vs-ZNF431-201.alignment profile-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF431-201/neg_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_profile_pattern_1.n_393-vs-ZNF431-201.alignment profile-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF431-201/neg_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_profile_pattern_2.n_167-vs-ZNF431-201.alignment profile-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF431-201/neg_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_profile_pattern_3.n_147-vs-ZNF431-201.alignment profile-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF431-201/neg_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_profile_pattern_4.n_125-vs-ZNF431-201.alignment profile-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF431-201/neg_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_profile_pattern_5.n_92-vs-ZNF431-201.alignment profile-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF431-201/neg_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_profile_pattern_6.n_87-vs-ZNF431-201.alignment profile-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF431-201/neg_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_profile_pattern_7.n_79-vs-ZNF431-201.alignment profile-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF431-201/neg_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_profile_pattern_8.n_77-vs-ZNF431-201.alignment profile-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF431-201/neg_patterns.ENCSR204ALX_ChIP_ZNF431_HepG2_ENCSR178LPI_profile_pattern_9.n_64-vs-ZNF431-201.alignment profile-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF431-201/neg_patterns.ENCSR609ZLF_ChIP_ZNF431_K562_ENCSR671RWE_profile_pattern_0.n_1230-vs-ZNF431-201.alignment profile-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF431-201/neg_patterns.ENCSR609ZLF_ChIP_ZNF431_K562_ENCSR671RWE_profile_pattern_10.n_38-vs-ZNF431-201.alignment profile-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF431-201/neg_patterns.ENCSR609ZLF_ChIP_ZNF431_K562_ENCSR671RWE_profile_pattern_11.n_26-vs-ZNF431-201.alignment profile-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF431-201/neg_patterns.ENCSR609ZLF_ChIP_ZNF431_K562_ENCSR671RWE_profile_pattern_12.n_21-vs-ZNF431-201.alignment profile-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF431-201/neg_patterns.ENCSR609ZLF_ChIP_ZNF431_K562_ENCSR671RWE_profile_pattern_1.n_556-vs-ZNF431-201.alignment profile-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF431-201/neg_patterns.ENCSR609ZLF_ChIP_ZNF431_K562_ENCSR671RWE_profile_pattern_2.n_234-vs-ZNF431-201.alignment profile-znf_b1h_alignment/ZNF431-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF431-201/neg_patterns.ENCSR609ZLF_ChIP_ZNF431_K562_ENCSR671RWE_profile_pattern_3.n_228-vs-ZNF431-201.alignment profile-znf_b1h_alignment/ZNF431-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF431-201/neg_patterns.ENCSR609ZLF_ChIP_ZNF431_K562_ENCSR671RWE_profile_pattern_5.n_79-vs-ZNF431-201.alignment profile-znf_b1h_alignment/ZNF431-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF432-201/ChipExo_models_ZNF432_profile-pos.pattern_1.n_109-vs-ZNF432-201.alignment profile-znf_b1h_alignment/ZNF432-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF432-201/ChipExo_models_ZNF432_profile-pos.pattern_2.n_85-vs-ZNF432-201.alignment profile-znf_b1h_alignment/ZNF432-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF432-201/ChipExo_models_ZNF432_profile-pos.pattern_3.n_72-vs-ZNF432-201.alignment profile-znf_b1h_alignment/ZNF432-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF432-201/ChipExo_models_ZNF432_profile-pos.pattern_4.n_56-vs-ZNF432-201.alignment profile-znf_b1h_alignment/ZNF432-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF432-201/ChipExo_models_ZNF432_profile-pos.pattern_5.n_34-vs-ZNF432-201.alignment profile-znf_b1h_alignment/ZNF432-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF432-201/ChipExo_models_ZNF432_profile-pos.pattern_6.n_26-vs-ZNF432-201.alignment profile-znf_b1h_alignment/ZNF432-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF432-201/ChipExo_models_ZNF432_profile-pos.pattern_7.n_20-vs-ZNF432-201.alignment profile-znf_b1h_alignment/ZNF432-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF432-201/neg_patterns.ENCSR043VRG_ChIP_ZNF432_HepG2_ENCSR827PYQ_profile_pattern_0.n_51-vs-ZNF432-201.alignment profile-znf_b1h_alignment/ZNF432-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF432-201/neg_patterns.ENCSR043VRG_ChIP_ZNF432_HepG2_ENCSR827PYQ_profile_pattern_1.n_49-vs-ZNF432-201.alignment profile-znf_b1h_alignment/ZNF432-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF432-201/neg_patterns.ENCSR043VRG_ChIP_ZNF432_HepG2_ENCSR827PYQ_profile_pattern_2.n_47-vs-ZNF432-201.alignment profile-znf_b1h_alignment/ZNF432-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF432-201/neg_patterns.ENCSR043VRG_ChIP_ZNF432_HepG2_ENCSR827PYQ_profile_pattern_4.n_39-vs-ZNF432-201.alignment profile-znf_b1h_alignment/ZNF432-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF432-201/neg_patterns.ENCSR043VRG_ChIP_ZNF432_HepG2_ENCSR827PYQ_profile_pattern_5.n_36-vs-ZNF432-201.alignment profile-znf_b1h_alignment/ZNF432-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF432-201/neg_patterns.ENCSR043VRG_ChIP_ZNF432_HepG2_ENCSR827PYQ_profile_pattern_6.n_32-vs-ZNF432-201.alignment profile-znf_b1h_alignment/ZNF432-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF432-201/neg_patterns.ENCSR043VRG_ChIP_ZNF432_HepG2_ENCSR827PYQ_profile_pattern_7.n_30-vs-ZNF432-201.alignment profile-znf_b1h_alignment/ZNF432-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF432-201/pos_patterns.ENCSR043VRG_ChIP_ZNF432_HepG2_ENCSR827PYQ_profile_pattern_0.n_117-vs-ZNF432-201.alignment profile-znf_b1h_alignment/ZNF432-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF432-201/pos_patterns.ENCSR043VRG_ChIP_ZNF432_HepG2_ENCSR827PYQ_profile_pattern_10.n_35-vs-ZNF432-201.alignment profile-znf_b1h_alignment/ZNF432-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF432-201/pos_patterns.ENCSR043VRG_ChIP_ZNF432_HepG2_ENCSR827PYQ_profile_pattern_11.n_33-vs-ZNF432-201.alignment profile-znf_b1h_alignment/ZNF432-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF432-201/pos_patterns.ENCSR043VRG_ChIP_ZNF432_HepG2_ENCSR827PYQ_profile_pattern_12.n_21-vs-ZNF432-201.alignment profile-znf_b1h_alignment/ZNF432-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF432-201/pos_patterns.ENCSR043VRG_ChIP_ZNF432_HepG2_ENCSR827PYQ_profile_pattern_13.n_20-vs-ZNF432-201.alignment profile-znf_b1h_alignment/ZNF432-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF432-201/pos_patterns.ENCSR043VRG_ChIP_ZNF432_HepG2_ENCSR827PYQ_profile_pattern_1.n_90-vs-ZNF432-201.alignment profile-znf_b1h_alignment/ZNF432-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF432-201/pos_patterns.ENCSR043VRG_ChIP_ZNF432_HepG2_ENCSR827PYQ_profile_pattern_2.n_86-vs-ZNF432-201.alignment profile-znf_b1h_alignment/ZNF432-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF432-201/pos_patterns.ENCSR043VRG_ChIP_ZNF432_HepG2_ENCSR827PYQ_profile_pattern_3.n_81-vs-ZNF432-201.alignment profile-znf_b1h_alignment/ZNF432-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF432-201/pos_patterns.ENCSR043VRG_ChIP_ZNF432_HepG2_ENCSR827PYQ_profile_pattern_4.n_76-vs-ZNF432-201.alignment profile-znf_b1h_alignment/ZNF432-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF432-201/pos_patterns.ENCSR043VRG_ChIP_ZNF432_HepG2_ENCSR827PYQ_profile_pattern_5.n_62-vs-ZNF432-201.alignment profile-znf_b1h_alignment/ZNF432-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF432-201/pos_patterns.ENCSR043VRG_ChIP_ZNF432_HepG2_ENCSR827PYQ_profile_pattern_6.n_58-vs-ZNF432-201.alignment profile-znf_b1h_alignment/ZNF432-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF432-201/pos_patterns.ENCSR043VRG_ChIP_ZNF432_HepG2_ENCSR827PYQ_profile_pattern_7.n_54-vs-ZNF432-201.alignment profile-znf_b1h_alignment/ZNF432-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF432-201/pos_patterns.ENCSR043VRG_ChIP_ZNF432_HepG2_ENCSR827PYQ_profile_pattern_8.n_50-vs-ZNF432-201.alignment profile-znf_b1h_alignment/ZNF432-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF432-201/pos_patterns.ENCSR043VRG_ChIP_ZNF432_HepG2_ENCSR827PYQ_profile_pattern_9.n_40-vs-ZNF432-201.alignment profile-znf_b1h_alignment/ZNF432-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF433-201/ChipExo_models_ZNF433_profile-pos.pattern_0.n_684-vs-ZNF433-201.alignment profile-znf_b1h_alignment/ZNF433-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF433-201/ChipExo_models_ZNF433_profile-pos.pattern_1.n_259-vs-ZNF433-201.alignment profile-znf_b1h_alignment/ZNF433-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF433-201/ChipExo_models_ZNF433_profile-pos.pattern_2.n_122-vs-ZNF433-201.alignment profile-znf_b1h_alignment/ZNF433-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF433-201/ChipExo_models_ZNF433_profile-pos.pattern_3.n_36-vs-ZNF433-201.alignment profile-znf_b1h_alignment/ZNF433-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF433-201/pos_patterns.ENCSR586BRJ_ChIP_ZNF433_HEK293_ENCSR226ALT_profile_pattern_0.n_3099-vs-ZNF433-201.alignment profile-znf_b1h_alignment/ZNF433-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF433-201/pos_patterns.ENCSR586BRJ_ChIP_ZNF433_HEK293_ENCSR226ALT_profile_pattern_1.n_81-vs-ZNF433-201.alignment profile-znf_b1h_alignment/ZNF433-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF433-201/pos_patterns.ENCSR586BRJ_ChIP_ZNF433_HEK293_ENCSR226ALT_profile_pattern_2.n_60-vs-ZNF433-201.alignment profile-znf_b1h_alignment/ZNF433-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF436-201/Hughes_GR_models_ZNF436_profile-pos.pattern_0.n_3481-vs-ZNF436-201.alignment profile-znf_b1h_alignment/ZNF436-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF436-201/neg_patterns.ENCSR335SUD_ChIP_ZNF436_K562_ENCSR659IWQ_profile_pattern_0.n_245-vs-ZNF436-201.alignment profile-znf_b1h_alignment/ZNF436-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF436-201/neg_patterns.ENCSR335SUD_ChIP_ZNF436_K562_ENCSR659IWQ_profile_pattern_1.n_227-vs-ZNF436-201.alignment profile-znf_b1h_alignment/ZNF436-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF436-201/neg_patterns.ENCSR335SUD_ChIP_ZNF436_K562_ENCSR659IWQ_profile_pattern_2.n_196-vs-ZNF436-201.alignment profile-znf_b1h_alignment/ZNF436-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF436-201/neg_patterns.ENCSR335SUD_ChIP_ZNF436_K562_ENCSR659IWQ_profile_pattern_3.n_124-vs-ZNF436-201.alignment profile-znf_b1h_alignment/ZNF436-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF436-201/neg_patterns.ENCSR335SUD_ChIP_ZNF436_K562_ENCSR659IWQ_profile_pattern_4.n_80-vs-ZNF436-201.alignment profile-znf_b1h_alignment/ZNF436-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF436-201/neg_patterns.ENCSR335SUD_ChIP_ZNF436_K562_ENCSR659IWQ_profile_pattern_5.n_79-vs-ZNF436-201.alignment profile-znf_b1h_alignment/ZNF436-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF436-201/neg_patterns.ENCSR335SUD_ChIP_ZNF436_K562_ENCSR659IWQ_profile_pattern_6.n_46-vs-ZNF436-201.alignment profile-znf_b1h_alignment/ZNF436-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF436-201/neg_patterns.ENCSR335SUD_ChIP_ZNF436_K562_ENCSR659IWQ_profile_pattern_7.n_33-vs-ZNF436-201.alignment profile-znf_b1h_alignment/ZNF436-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF436-201/neg_patterns.ENCSR335SUD_ChIP_ZNF436_K562_ENCSR659IWQ_profile_pattern_8.n_30-vs-ZNF436-201.alignment profile-znf_b1h_alignment/ZNF436-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF436-201/pos_patterns.ENCSR335SUD_ChIP_ZNF436_K562_ENCSR659IWQ_profile_pattern_0.n_1168-vs-ZNF436-201.alignment profile-znf_b1h_alignment/ZNF436-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF436-201/pos_patterns.ENCSR335SUD_ChIP_ZNF436_K562_ENCSR659IWQ_profile_pattern_10.n_38-vs-ZNF436-201.alignment profile-znf_b1h_alignment/ZNF436-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF436-201/pos_patterns.ENCSR335SUD_ChIP_ZNF436_K562_ENCSR659IWQ_profile_pattern_11.n_35-vs-ZNF436-201.alignment profile-znf_b1h_alignment/ZNF436-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF436-201/pos_patterns.ENCSR335SUD_ChIP_ZNF436_K562_ENCSR659IWQ_profile_pattern_1.n_165-vs-ZNF436-201.alignment profile-znf_b1h_alignment/ZNF436-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF436-201/pos_patterns.ENCSR335SUD_ChIP_ZNF436_K562_ENCSR659IWQ_profile_pattern_2.n_139-vs-ZNF436-201.alignment profile-znf_b1h_alignment/ZNF436-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF436-201/pos_patterns.ENCSR335SUD_ChIP_ZNF436_K562_ENCSR659IWQ_profile_pattern_3.n_137-vs-ZNF436-201.alignment profile-znf_b1h_alignment/ZNF436-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF436-201/pos_patterns.ENCSR335SUD_ChIP_ZNF436_K562_ENCSR659IWQ_profile_pattern_4.n_132-vs-ZNF436-201.alignment profile-znf_b1h_alignment/ZNF436-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF436-201/pos_patterns.ENCSR335SUD_ChIP_ZNF436_K562_ENCSR659IWQ_profile_pattern_5.n_115-vs-ZNF436-201.alignment profile-znf_b1h_alignment/ZNF436-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF436-201/pos_patterns.ENCSR335SUD_ChIP_ZNF436_K562_ENCSR659IWQ_profile_pattern_6.n_90-vs-ZNF436-201.alignment profile-znf_b1h_alignment/ZNF436-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF436-201/pos_patterns.ENCSR335SUD_ChIP_ZNF436_K562_ENCSR659IWQ_profile_pattern_7.n_59-vs-ZNF436-201.alignment profile-znf_b1h_alignment/ZNF436-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF436-201/pos_patterns.ENCSR335SUD_ChIP_ZNF436_K562_ENCSR659IWQ_profile_pattern_8.n_47-vs-ZNF436-201.alignment profile-znf_b1h_alignment/ZNF436-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF436-201/pos_patterns.ENCSR335SUD_ChIP_ZNF436_K562_ENCSR659IWQ_profile_pattern_9.n_41-vs-ZNF436-201.alignment profile-znf_b1h_alignment/ZNF436-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF440-201/ChipExo_models_ZNF440_profile-pos.pattern_0.n_2353-vs-ZNF440-201.alignment profile-znf_b1h_alignment/ZNF440-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF444-201/pos_patterns.ENCSR038XIA_ChIP_ZNF444_MCF-7_ENCSR468ULA_profile_pattern_17.n_115-vs-ZNF444-201.alignment profile-znf_b1h_alignment/ZNF444-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF444-201/pos_patterns.ENCSR038XIA_ChIP_ZNF444_MCF-7_ENCSR468ULA_profile_pattern_18.n_108-vs-ZNF444-201.alignment profile-znf_b1h_alignment/ZNF444-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF444-201/pos_patterns.ENCSR038XIA_ChIP_ZNF444_MCF-7_ENCSR468ULA_profile_pattern_19.n_105-vs-ZNF444-201.alignment profile-znf_b1h_alignment/ZNF444-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF444-201/pos_patterns.ENCSR038XIA_ChIP_ZNF444_MCF-7_ENCSR468ULA_profile_pattern_1.n_2423-vs-ZNF444-201.alignment profile-znf_b1h_alignment/ZNF444-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF444-201/pos_patterns.ENCSR038XIA_ChIP_ZNF444_MCF-7_ENCSR468ULA_profile_pattern_20.n_92-vs-ZNF444-201.alignment profile-znf_b1h_alignment/ZNF444-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF444-201/pos_patterns.ENCSR164RIC_ChIP_ZNF444_K562_ENCSR779BUX_profile_pattern_6.n_46-vs-ZNF444-201.alignment profile-znf_b1h_alignment/ZNF444-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF445-201/ChipExo_models_ZNF445_profile-pos.pattern_0.n_523-vs-ZNF445-201.alignment profile-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF445-201/ChipExo_models_ZNF445_profile-pos.pattern_10.n_50-vs-ZNF445-201.alignment profile-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF445-201/ChipExo_models_ZNF445_profile-pos.pattern_11.n_45-vs-ZNF445-201.alignment profile-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF445-201/ChipExo_models_ZNF445_profile-pos.pattern_12.n_42-vs-ZNF445-201.alignment profile-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF445-201/ChipExo_models_ZNF445_profile-pos.pattern_13.n_35-vs-ZNF445-201.alignment profile-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF445-201/ChipExo_models_ZNF445_profile-pos.pattern_14.n_28-vs-ZNF445-201.alignment profile-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF445-201/ChipExo_models_ZNF445_profile-pos.pattern_15.n_23-vs-ZNF445-201.alignment profile-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF445-201/ChipExo_models_ZNF445_profile-pos.pattern_1.n_102-vs-ZNF445-201.alignment profile-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF445-201/ChipExo_models_ZNF445_profile-pos.pattern_2.n_99-vs-ZNF445-201.alignment profile-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF445-201/ChipExo_models_ZNF445_profile-pos.pattern_3.n_86-vs-ZNF445-201.alignment profile-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF445-201/ChipExo_models_ZNF445_profile-pos.pattern_4.n_85-vs-ZNF445-201.alignment profile-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF445-201/ChipExo_models_ZNF445_profile-pos.pattern_5.n_85-vs-ZNF445-201.alignment profile-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF445-201/ChipExo_models_ZNF445_profile-pos.pattern_6.n_73-vs-ZNF445-201.alignment profile-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF445-201/ChipExo_models_ZNF445_profile-pos.pattern_7.n_71-vs-ZNF445-201.alignment profile-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF445-201/ChipExo_models_ZNF445_profile-pos.pattern_8.n_69-vs-ZNF445-201.alignment profile-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF445-201/ChipExo_models_ZNF445_profile-pos.pattern_9.n_57-vs-ZNF445-201.alignment profile-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF445-201/neg_patterns.ENCSR883UGG_ChIP_ZNF445_K562_ENCSR082FMG_profile_pattern_0.n_175-vs-ZNF445-201.alignment profile-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF445-201/neg_patterns.ENCSR883UGG_ChIP_ZNF445_K562_ENCSR082FMG_profile_pattern_1.n_107-vs-ZNF445-201.alignment profile-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF445-201/neg_patterns.ENCSR883UGG_ChIP_ZNF445_K562_ENCSR082FMG_profile_pattern_2.n_63-vs-ZNF445-201.alignment profile-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF445-201/neg_patterns.ENCSR883UGG_ChIP_ZNF445_K562_ENCSR082FMG_profile_pattern_3.n_50-vs-ZNF445-201.alignment profile-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF445-201/neg_patterns.ENCSR883UGG_ChIP_ZNF445_K562_ENCSR082FMG_profile_pattern_4.n_29-vs-ZNF445-201.alignment profile-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF445-201/pos_patterns.ENCSR883UGG_ChIP_ZNF445_K562_ENCSR082FMG_profile_pattern_0.n_619-vs-ZNF445-201.alignment profile-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF445-201/pos_patterns.ENCSR883UGG_ChIP_ZNF445_K562_ENCSR082FMG_profile_pattern_10.n_65-vs-ZNF445-201.alignment profile-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF445-201/pos_patterns.ENCSR883UGG_ChIP_ZNF445_K562_ENCSR082FMG_profile_pattern_11.n_55-vs-ZNF445-201.alignment profile-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF445-201/pos_patterns.ENCSR883UGG_ChIP_ZNF445_K562_ENCSR082FMG_profile_pattern_12.n_54-vs-ZNF445-201.alignment profile-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF445-201/pos_patterns.ENCSR883UGG_ChIP_ZNF445_K562_ENCSR082FMG_profile_pattern_13.n_50-vs-ZNF445-201.alignment profile-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF445-201/pos_patterns.ENCSR883UGG_ChIP_ZNF445_K562_ENCSR082FMG_profile_pattern_14.n_47-vs-ZNF445-201.alignment profile-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF445-201/pos_patterns.ENCSR883UGG_ChIP_ZNF445_K562_ENCSR082FMG_profile_pattern_15.n_46-vs-ZNF445-201.alignment profile-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF445-201/pos_patterns.ENCSR883UGG_ChIP_ZNF445_K562_ENCSR082FMG_profile_pattern_16.n_46-vs-ZNF445-201.alignment profile-znf_b1h_alignment/ZNF445-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF445-201/pos_patterns.ENCSR883UGG_ChIP_ZNF445_K562_ENCSR082FMG_profile_pattern_17.n_43-vs-ZNF445-201.alignment profile-znf_b1h_alignment/ZNF445-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF445-201/pos_patterns.ENCSR883UGG_ChIP_ZNF445_K562_ENCSR082FMG_profile_pattern_19.n_36-vs-ZNF445-201.alignment profile-znf_b1h_alignment/ZNF445-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF449-201/neg_patterns.ENCSR738SLS_ChIP_ZNF449_HEK293_ENCSR809HTU_profile_pattern_2.n_29-vs-ZNF449-201.alignment profile-znf_b1h_alignment/ZNF449-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF449-201/pos_patterns.ENCSR659YWQ_ChIP_ZNF449_K562_ENCSR040FUU_profile_pattern_0.n_1247-vs-ZNF449-201.alignment profile-znf_b1h_alignment/ZNF449-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF449-201/pos_patterns.ENCSR659YWQ_ChIP_ZNF449_K562_ENCSR040FUU_profile_pattern_10.n_86-vs-ZNF449-201.alignment profile-znf_b1h_alignment/ZNF449-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF449-201/pos_patterns.ENCSR659YWQ_ChIP_ZNF449_K562_ENCSR040FUU_profile_pattern_12.n_79-vs-ZNF449-201.alignment profile-znf_b1h_alignment/ZNF449-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF449-201/pos_patterns.ENCSR659YWQ_ChIP_ZNF449_K562_ENCSR040FUU_profile_pattern_1.n_1162-vs-ZNF449-201.alignment profile-znf_b1h_alignment/ZNF449-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF449-201/pos_patterns.ENCSR659YWQ_ChIP_ZNF449_K562_ENCSR040FUU_profile_pattern_21.n_30-vs-ZNF449-201.alignment profile-znf_b1h_alignment/ZNF449-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF449-201/pos_patterns.ENCSR659YWQ_ChIP_ZNF449_K562_ENCSR040FUU_profile_pattern_22.n_24-vs-ZNF449-201.alignment profile-znf_b1h_alignment/ZNF449-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF449-201/pos_patterns.ENCSR659YWQ_ChIP_ZNF449_K562_ENCSR040FUU_profile_pattern_23.n_22-vs-ZNF449-201.alignment profile-znf_b1h_alignment/ZNF449-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF449-201/pos_patterns.ENCSR659YWQ_ChIP_ZNF449_K562_ENCSR040FUU_profile_pattern_24.n_21-vs-ZNF449-201.alignment profile-znf_b1h_alignment/ZNF449-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF449-201/pos_patterns.ENCSR659YWQ_ChIP_ZNF449_K562_ENCSR040FUU_profile_pattern_2.n_459-vs-ZNF449-201.alignment profile-znf_b1h_alignment/ZNF449-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF454-201/ChipExo_models_ZNF454_profile-pos.pattern_4.n_23-vs-ZNF454-201.alignment profile-znf_b1h_alignment/ZNF454-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF460-201/ChipExo_models_ZNF460_profile-pos.pattern_0.n_718-vs-ZNF460-201.alignment profile-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF460-201/ChipExo_models_ZNF460_profile-pos.pattern_1.n_276-vs-ZNF460-201.alignment profile-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF460-201/ChipExo_models_ZNF460_profile-pos.pattern_2.n_213-vs-ZNF460-201.alignment profile-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF460-201/ChipExo_models_ZNF460_profile-pos.pattern_3.n_90-vs-ZNF460-201.alignment profile-znf_b1h_alignment/ZNF460-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF460-201/ChipExo_models_ZNF460_profile-pos.pattern_5.n_58-vs-ZNF460-201.alignment profile-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF460-201/ChipExo_models_ZNF460_profile-pos.pattern_6.n_37-vs-ZNF460-201.alignment profile-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF460-201/ChipExo_models_ZNF460_profile-pos.pattern_7.n_24-vs-ZNF460-201.alignment profile-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF460-201/ChipExo_models_ZNF460_profile-pos.pattern_8.n_22-vs-ZNF460-201.alignment profile-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF460-201/ChipExo_models_ZNF460_profile-pos.pattern_9.n_20-vs-ZNF460-201.alignment profile-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF460-201/neg_patterns.ENCSR261UIH_ChIP_ZNF460_HepG2_ENCSR849AEI_profile_pattern_0.n_2647-vs-ZNF460-201.alignment profile-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF460-201/neg_patterns.ENCSR261UIH_ChIP_ZNF460_HepG2_ENCSR849AEI_profile_pattern_10.n_52-vs-ZNF460-201.alignment profile-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF460-201/neg_patterns.ENCSR261UIH_ChIP_ZNF460_HepG2_ENCSR849AEI_profile_pattern_1.n_709-vs-ZNF460-201.alignment profile-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF460-201/neg_patterns.ENCSR261UIH_ChIP_ZNF460_HepG2_ENCSR849AEI_profile_pattern_2.n_421-vs-ZNF460-201.alignment profile-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF460-201/neg_patterns.ENCSR261UIH_ChIP_ZNF460_HepG2_ENCSR849AEI_profile_pattern_3.n_395-vs-ZNF460-201.alignment profile-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF460-201/neg_patterns.ENCSR261UIH_ChIP_ZNF460_HepG2_ENCSR849AEI_profile_pattern_4.n_167-vs-ZNF460-201.alignment profile-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF460-201/neg_patterns.ENCSR261UIH_ChIP_ZNF460_HepG2_ENCSR849AEI_profile_pattern_5.n_126-vs-ZNF460-201.alignment profile-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF460-201/neg_patterns.ENCSR261UIH_ChIP_ZNF460_HepG2_ENCSR849AEI_profile_pattern_6.n_118-vs-ZNF460-201.alignment profile-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF460-201/neg_patterns.ENCSR261UIH_ChIP_ZNF460_HepG2_ENCSR849AEI_profile_pattern_7.n_103-vs-ZNF460-201.alignment profile-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF460-201/neg_patterns.ENCSR261UIH_ChIP_ZNF460_HepG2_ENCSR849AEI_profile_pattern_8.n_99-vs-ZNF460-201.alignment profile-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF460-201/neg_patterns.ENCSR261UIH_ChIP_ZNF460_HepG2_ENCSR849AEI_profile_pattern_9.n_87-vs-ZNF460-201.alignment profile-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF460-201/pos_patterns.ENCSR261UIH_ChIP_ZNF460_HepG2_ENCSR849AEI_profile_pattern_0.n_8998-vs-ZNF460-201.alignment profile-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF460-201/pos_patterns.ENCSR261UIH_ChIP_ZNF460_HepG2_ENCSR849AEI_profile_pattern_10.n_47-vs-ZNF460-201.alignment profile-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF460-201/pos_patterns.ENCSR261UIH_ChIP_ZNF460_HepG2_ENCSR849AEI_profile_pattern_11.n_35-vs-ZNF460-201.alignment profile-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF460-201/pos_patterns.ENCSR261UIH_ChIP_ZNF460_HepG2_ENCSR849AEI_profile_pattern_12.n_21-vs-ZNF460-201.alignment profile-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF460-201/pos_patterns.ENCSR261UIH_ChIP_ZNF460_HepG2_ENCSR849AEI_profile_pattern_1.n_8254-vs-ZNF460-201.alignment profile-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF460-201/pos_patterns.ENCSR261UIH_ChIP_ZNF460_HepG2_ENCSR849AEI_profile_pattern_2.n_1254-vs-ZNF460-201.alignment profile-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF460-201/pos_patterns.ENCSR261UIH_ChIP_ZNF460_HepG2_ENCSR849AEI_profile_pattern_3.n_631-vs-ZNF460-201.alignment profile-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF460-201/pos_patterns.ENCSR261UIH_ChIP_ZNF460_HepG2_ENCSR849AEI_profile_pattern_4.n_245-vs-ZNF460-201.alignment profile-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF460-201/pos_patterns.ENCSR261UIH_ChIP_ZNF460_HepG2_ENCSR849AEI_profile_pattern_5.n_198-vs-ZNF460-201.alignment profile-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF460-201/pos_patterns.ENCSR261UIH_ChIP_ZNF460_HepG2_ENCSR849AEI_profile_pattern_6.n_112-vs-ZNF460-201.alignment profile-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF460-201/pos_patterns.ENCSR261UIH_ChIP_ZNF460_HepG2_ENCSR849AEI_profile_pattern_7.n_102-vs-ZNF460-201.alignment profile-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF460-201/pos_patterns.ENCSR261UIH_ChIP_ZNF460_HepG2_ENCSR849AEI_profile_pattern_8.n_87-vs-ZNF460-201.alignment profile-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF460-201/pos_patterns.ENCSR261UIH_ChIP_ZNF460_HepG2_ENCSR849AEI_profile_pattern_9.n_68-vs-ZNF460-201.alignment profile-znf_b1h_alignment/ZNF460-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF462-201/pos_patterns.ENCSR334UWP_ChIP_ZNF462_GM23338_ENCSR340TQA_profile_pattern_0.n_3643-vs-ZNF462-201.alignment profile-znf_b1h_alignment/ZNF462-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF462-201/pos_patterns.ENCSR334UWP_ChIP_ZNF462_GM23338_ENCSR340TQA_profile_pattern_1.n_1788-vs-ZNF462-201.alignment profile-znf_b1h_alignment/ZNF462-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF462-201/pos_patterns.ENCSR334UWP_ChIP_ZNF462_GM23338_ENCSR340TQA_profile_pattern_2.n_1198-vs-ZNF462-201.alignment profile-znf_b1h_alignment/ZNF462-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF462-201/pos_patterns.ENCSR334UWP_ChIP_ZNF462_GM23338_ENCSR340TQA_profile_pattern_3.n_296-vs-ZNF462-201.alignment profile-znf_b1h_alignment/ZNF462-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF462-201/pos_patterns.ENCSR334UWP_ChIP_ZNF462_GM23338_ENCSR340TQA_profile_pattern_4.n_240-vs-ZNF462-201.alignment profile-znf_b1h_alignment/ZNF462-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF462-201/pos_patterns.ENCSR334UWP_ChIP_ZNF462_GM23338_ENCSR340TQA_profile_pattern_5.n_136-vs-ZNF462-201.alignment profile-znf_b1h_alignment/ZNF462-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF462-201/pos_patterns.ENCSR334UWP_ChIP_ZNF462_GM23338_ENCSR340TQA_profile_pattern_6.n_55-vs-ZNF462-201.alignment profile-znf_b1h_alignment/ZNF462-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF462-201/pos_patterns.ENCSR334UWP_ChIP_ZNF462_GM23338_ENCSR340TQA_profile_pattern_7.n_36-vs-ZNF462-201.alignment profile-znf_b1h_alignment/ZNF462-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF462-201/pos_patterns.ENCSR334UWP_ChIP_ZNF462_GM23338_ENCSR340TQA_profile_pattern_9.n_29-vs-ZNF462-201.alignment profile-znf_b1h_alignment/ZNF462-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF462-202/pos_patterns.ENCSR334UWP_ChIP_ZNF462_GM23338_ENCSR340TQA_profile_pattern_0.n_3643-vs-ZNF462-202.alignment profile-znf_b1h_alignment/ZNF462-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF462-202/pos_patterns.ENCSR334UWP_ChIP_ZNF462_GM23338_ENCSR340TQA_profile_pattern_10.n_20-vs-ZNF462-202.alignment profile-znf_b1h_alignment/ZNF462-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF462-202/pos_patterns.ENCSR334UWP_ChIP_ZNF462_GM23338_ENCSR340TQA_profile_pattern_1.n_1788-vs-ZNF462-202.alignment profile-znf_b1h_alignment/ZNF462-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF462-202/pos_patterns.ENCSR334UWP_ChIP_ZNF462_GM23338_ENCSR340TQA_profile_pattern_2.n_1198-vs-ZNF462-202.alignment profile-znf_b1h_alignment/ZNF462-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF462-202/pos_patterns.ENCSR334UWP_ChIP_ZNF462_GM23338_ENCSR340TQA_profile_pattern_3.n_296-vs-ZNF462-202.alignment profile-znf_b1h_alignment/ZNF462-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF462-202/pos_patterns.ENCSR334UWP_ChIP_ZNF462_GM23338_ENCSR340TQA_profile_pattern_4.n_240-vs-ZNF462-202.alignment profile-znf_b1h_alignment/ZNF462-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF462-202/pos_patterns.ENCSR334UWP_ChIP_ZNF462_GM23338_ENCSR340TQA_profile_pattern_5.n_136-vs-ZNF462-202.alignment profile-znf_b1h_alignment/ZNF462-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF462-202/pos_patterns.ENCSR334UWP_ChIP_ZNF462_GM23338_ENCSR340TQA_profile_pattern_6.n_55-vs-ZNF462-202.alignment profile-znf_b1h_alignment/ZNF462-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF462-202/pos_patterns.ENCSR334UWP_ChIP_ZNF462_GM23338_ENCSR340TQA_profile_pattern_7.n_36-vs-ZNF462-202.alignment profile-znf_b1h_alignment/ZNF462-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF462-202/pos_patterns.ENCSR334UWP_ChIP_ZNF462_GM23338_ENCSR340TQA_profile_pattern_8.n_36-vs-ZNF462-202.alignment profile-znf_b1h_alignment/ZNF462-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF462-202/pos_patterns.ENCSR334UWP_ChIP_ZNF462_GM23338_ENCSR340TQA_profile_pattern_9.n_29-vs-ZNF462-202.alignment profile-znf_b1h_alignment/ZNF462-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF467-201/Hughes_GR_models_ZNF467_profile-neg.pattern_0.n_47-vs-ZNF467-201.alignment profile-znf_b1h_alignment/ZNF467-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF467-201/Hughes_GR_models_ZNF467_profile-neg.pattern_1.n_42-vs-ZNF467-201.alignment profile-znf_b1h_alignment/ZNF467-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF467-201/Hughes_GR_models_ZNF467_profile-neg.pattern_2.n_26-vs-ZNF467-201.alignment profile-znf_b1h_alignment/ZNF467-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF467-201/Hughes_GR_models_ZNF467_profile-neg.pattern_3.n_21-vs-ZNF467-201.alignment profile-znf_b1h_alignment/ZNF467-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF467-201/Hughes_GR_models_ZNF467_profile-pos.pattern_0.n_13895-vs-ZNF467-201.alignment profile-znf_b1h_alignment/ZNF467-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF467-201/Hughes_GR_models_ZNF467_profile-pos.pattern_1.n_1311-vs-ZNF467-201.alignment profile-znf_b1h_alignment/ZNF467-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF467-201/Hughes_GR_models_ZNF467_profile-pos.pattern_2.n_138-vs-ZNF467-201.alignment profile-znf_b1h_alignment/ZNF467-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF467-201/Hughes_GR_models_ZNF467_profile-pos.pattern_3.n_129-vs-ZNF467-201.alignment profile-znf_b1h_alignment/ZNF467-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF467-201/Hughes_GR_models_ZNF467_profile-pos.pattern_4.n_24-vs-ZNF467-201.alignment profile-znf_b1h_alignment/ZNF467-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF467-201/Hughes_NB_models_ZNF467_profile-neg.pattern_0.n_70-vs-ZNF467-201.alignment profile-znf_b1h_alignment/ZNF467-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF467-201/Hughes_NB_models_ZNF467_profile-neg.pattern_1.n_65-vs-ZNF467-201.alignment profile-znf_b1h_alignment/ZNF467-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF467-201/Hughes_NB_models_ZNF467_profile-neg.pattern_2.n_59-vs-ZNF467-201.alignment profile-znf_b1h_alignment/ZNF467-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF467-201/Hughes_NB_models_ZNF467_profile-neg.pattern_3.n_52-vs-ZNF467-201.alignment profile-znf_b1h_alignment/ZNF467-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF467-201/Hughes_NB_models_ZNF467_profile-neg.pattern_4.n_20-vs-ZNF467-201.alignment profile-znf_b1h_alignment/ZNF467-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF467-201/Hughes_NB_models_ZNF467_profile-pos.pattern_0.n_18054-vs-ZNF467-201.alignment profile-znf_b1h_alignment/ZNF467-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF467-201/Hughes_NB_models_ZNF467_profile-pos.pattern_1.n_1082-vs-ZNF467-201.alignment profile-znf_b1h_alignment/ZNF467-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF467-201/Hughes_NB_models_ZNF467_profile-pos.pattern_2.n_518-vs-ZNF467-201.alignment profile-znf_b1h_alignment/ZNF467-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF467-201/Hughes_NB_models_ZNF467_profile-pos.pattern_3.n_329-vs-ZNF467-201.alignment profile-znf_b1h_alignment/ZNF467-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF467-201/Hughes_NB_models_ZNF467_profile-pos.pattern_4.n_126-vs-ZNF467-201.alignment profile-znf_b1h_alignment/ZNF467-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF467-201/Hughes_NB_models_ZNF467_profile-pos.pattern_5.n_70-vs-ZNF467-201.alignment profile-znf_b1h_alignment/ZNF467-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF468-201/ChipExo_models_ZNF468_profile-pos.pattern_0.n_6030-vs-ZNF468-201.alignment profile-znf_b1h_alignment/ZNF468-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF468-201/ChipExo_models_ZNF468_profile-pos.pattern_1.n_536-vs-ZNF468-201.alignment profile-znf_b1h_alignment/ZNF468-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF468-201/ChipExo_models_ZNF468_profile-pos.pattern_2.n_237-vs-ZNF468-201.alignment profile-znf_b1h_alignment/ZNF468-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF468-201/neg_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_profile_pattern_0.n_43-vs-ZNF468-201.alignment profile-znf_b1h_alignment/ZNF468-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF468-201/neg_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_profile_pattern_1.n_22-vs-ZNF468-201.alignment profile-znf_b1h_alignment/ZNF468-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF468-201/neg_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_profile_pattern_2.n_20-vs-ZNF468-201.alignment profile-znf_b1h_alignment/ZNF468-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF468-201/pos_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_profile_pattern_0.n_868-vs-ZNF468-201.alignment profile-znf_b1h_alignment/ZNF468-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF468-201/pos_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_profile_pattern_10.n_83-vs-ZNF468-201.alignment profile-znf_b1h_alignment/ZNF468-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF468-201/pos_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_profile_pattern_11.n_80-vs-ZNF468-201.alignment profile-znf_b1h_alignment/ZNF468-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF468-201/pos_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_profile_pattern_12.n_56-vs-ZNF468-201.alignment profile-znf_b1h_alignment/ZNF468-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF468-201/pos_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_profile_pattern_13.n_38-vs-ZNF468-201.alignment profile-znf_b1h_alignment/ZNF468-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF468-201/pos_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_profile_pattern_14.n_30-vs-ZNF468-201.alignment profile-znf_b1h_alignment/ZNF468-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF468-202/ChipExo_models_ZNF468_profile-pos.pattern_0.n_6030-vs-ZNF468-202.alignment profile-znf_b1h_alignment/ZNF468-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF468-202/ChipExo_models_ZNF468_profile-pos.pattern_1.n_536-vs-ZNF468-202.alignment profile-znf_b1h_alignment/ZNF468-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF468-202/ChipExo_models_ZNF468_profile-pos.pattern_2.n_237-vs-ZNF468-202.alignment profile-znf_b1h_alignment/ZNF468-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF468-202/neg_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_profile_pattern_0.n_43-vs-ZNF468-202.alignment profile-znf_b1h_alignment/ZNF468-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF468-202/neg_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_profile_pattern_1.n_22-vs-ZNF468-202.alignment profile-znf_b1h_alignment/ZNF468-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF468-202/neg_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_profile_pattern_2.n_20-vs-ZNF468-202.alignment profile-znf_b1h_alignment/ZNF468-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF468-202/pos_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_profile_pattern_0.n_868-vs-ZNF468-202.alignment profile-znf_b1h_alignment/ZNF468-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF468-202/pos_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_profile_pattern_10.n_83-vs-ZNF468-202.alignment profile-znf_b1h_alignment/ZNF468-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF468-202/pos_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_profile_pattern_11.n_80-vs-ZNF468-202.alignment profile-znf_b1h_alignment/ZNF468-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF468-202/pos_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_profile_pattern_12.n_56-vs-ZNF468-202.alignment profile-znf_b1h_alignment/ZNF468-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF468-202/pos_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_profile_pattern_13.n_38-vs-ZNF468-202.alignment profile-znf_b1h_alignment/ZNF468-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF468-202/pos_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_profile_pattern_14.n_30-vs-ZNF468-202.alignment profile-znf_b1h_alignment/ZNF468-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF468-202/pos_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_profile_pattern_15.n_29-vs-ZNF468-202.alignment profile-znf_b1h_alignment/ZNF468-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF468-202/pos_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_profile_pattern_16.n_26-vs-ZNF468-202.alignment profile-znf_b1h_alignment/ZNF468-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF468-202/pos_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_profile_pattern_1.n_424-vs-ZNF468-202.alignment profile-znf_b1h_alignment/ZNF468-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF468-202/pos_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_profile_pattern_2.n_354-vs-ZNF468-202.alignment profile-znf_b1h_alignment/ZNF468-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF468-202/pos_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_profile_pattern_3.n_349-vs-ZNF468-202.alignment profile-znf_b1h_alignment/ZNF468-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF468-202/pos_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_profile_pattern_4.n_224-vs-ZNF468-202.alignment profile-znf_b1h_alignment/ZNF468-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF468-202/pos_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_profile_pattern_5.n_164-vs-ZNF468-202.alignment profile-znf_b1h_alignment/ZNF468-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF468-202/pos_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_profile_pattern_6.n_153-vs-ZNF468-202.alignment profile-znf_b1h_alignment/ZNF468-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF468-202/pos_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_profile_pattern_7.n_141-vs-ZNF468-202.alignment profile-znf_b1h_alignment/ZNF468-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF468-202/pos_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_profile_pattern_8.n_140-vs-ZNF468-202.alignment profile-znf_b1h_alignment/ZNF468-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF468-202/pos_patterns.ENCSR613YQN_ChIP_ZNF468_HepG2_ENCSR968ZQL_profile_pattern_9.n_110-vs-ZNF468-202.alignment profile-znf_b1h_alignment/ZNF468-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF473-201/pos_patterns.ENCSR567XAM_ChIP_ZNF473_HEK293_ENCSR888YIG_profile_pattern_0.n_330-vs-ZNF473-201.alignment profile-znf_b1h_alignment/ZNF473-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF473-201/pos_patterns.ENCSR567XAM_ChIP_ZNF473_HEK293_ENCSR888YIG_profile_pattern_1.n_141-vs-ZNF473-201.alignment profile-znf_b1h_alignment/ZNF473-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF473-201/pos_patterns.ENCSR567XAM_ChIP_ZNF473_HEK293_ENCSR888YIG_profile_pattern_2.n_73-vs-ZNF473-201.alignment profile-znf_b1h_alignment/ZNF473-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF473-201/pos_patterns.ENCSR567XAM_ChIP_ZNF473_HEK293_ENCSR888YIG_profile_pattern_3.n_54-vs-ZNF473-201.alignment profile-znf_b1h_alignment/ZNF473-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF473-201/pos_patterns.ENCSR567XAM_ChIP_ZNF473_HEK293_ENCSR888YIG_profile_pattern_4.n_46-vs-ZNF473-201.alignment profile-znf_b1h_alignment/ZNF473-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF473-201/pos_patterns.ENCSR567XAM_ChIP_ZNF473_HEK293_ENCSR888YIG_profile_pattern_5.n_27-vs-ZNF473-201.alignment profile-znf_b1h_alignment/ZNF473-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF473-201/pos_patterns.ENCSR567XAM_ChIP_ZNF473_HEK293_ENCSR888YIG_profile_pattern_6.n_27-vs-ZNF473-201.alignment profile-znf_b1h_alignment/ZNF473-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF473-201/pos_patterns.ENCSR567XAM_ChIP_ZNF473_HEK293_ENCSR888YIG_profile_pattern_7.n_21-vs-ZNF473-201.alignment profile-znf_b1h_alignment/ZNF473-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF479-201/ChipExo_models_ZNF479_profile-pos.pattern_0.n_23764-vs-ZNF479-201.alignment profile-znf_b1h_alignment/ZNF479-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF479-201/ChipExo_models_ZNF479_profile-pos.pattern_1.n_2155-vs-ZNF479-201.alignment profile-znf_b1h_alignment/ZNF479-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF479-201/ChipExo_models_ZNF479_profile-pos.pattern_2.n_914-vs-ZNF479-201.alignment profile-znf_b1h_alignment/ZNF479-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF479-201/ChipExo_models_ZNF479_profile-pos.pattern_3.n_349-vs-ZNF479-201.alignment profile-znf_b1h_alignment/ZNF479-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF479-201/ChipExo_models_ZNF479_profile-pos.pattern_4.n_135-vs-ZNF479-201.alignment profile-znf_b1h_alignment/ZNF479-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF479-201/ChipExo_models_ZNF479_profile-pos.pattern_5.n_121-vs-ZNF479-201.alignment profile-znf_b1h_alignment/ZNF479-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF479-201/ChipExo_models_ZNF479_profile-pos.pattern_6.n_25-vs-ZNF479-201.alignment profile-znf_b1h_alignment/ZNF479-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF479-201/ChipExo_models_ZNF479_profile-pos.pattern_7.n_21-vs-ZNF479-201.alignment profile-znf_b1h_alignment/ZNF479-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF480-201/ChipExo_models_ZNF480_profile-pos.pattern_0.n_918-vs-ZNF480-201.alignment profile-znf_b1h_alignment/ZNF480-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF480-201/ChipExo_models_ZNF480_profile-pos.pattern_1.n_99-vs-ZNF480-201.alignment profile-znf_b1h_alignment/ZNF480-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF480-201/ChipExo_models_ZNF480_profile-pos.pattern_2.n_79-vs-ZNF480-201.alignment profile-znf_b1h_alignment/ZNF480-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF480-201/ChipExo_models_ZNF480_profile-pos.pattern_3.n_50-vs-ZNF480-201.alignment profile-znf_b1h_alignment/ZNF480-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF480-201/ChipExo_models_ZNF480_profile-pos.pattern_5.n_37-vs-ZNF480-201.alignment profile-znf_b1h_alignment/ZNF480-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF483-201/neg_patterns.ENCSR436PIH_ChIP_ZNF483_HepG2_ENCSR179JMM_profile_pattern_1.n_38-vs-ZNF483-201.alignment profile-znf_b1h_alignment/ZNF483-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF483-201/neg_patterns.ENCSR436PIH_ChIP_ZNF483_HepG2_ENCSR179JMM_profile_pattern_3.n_33-vs-ZNF483-201.alignment profile-znf_b1h_alignment/ZNF483-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF483-201/pos_patterns.ENCSR436PIH_ChIP_ZNF483_HepG2_ENCSR179JMM_profile_pattern_14.n_130-vs-ZNF483-201.alignment profile-znf_b1h_alignment/ZNF483-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF484-202/pos_patterns.ENCSR471VAY_ChIP_ZNF484_HepG2_ENCSR669ZKJ_profile_pattern_16.n_26-vs-ZNF484-202.alignment profile-znf_b1h_alignment/ZNF484-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF484-202/pos_patterns.ENCSR471VAY_ChIP_ZNF484_HepG2_ENCSR669ZKJ_profile_pattern_1.n_170-vs-ZNF484-202.alignment profile-znf_b1h_alignment/ZNF484-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF484-202/pos_patterns.ENCSR471VAY_ChIP_ZNF484_HepG2_ENCSR669ZKJ_profile_pattern_2.n_148-vs-ZNF484-202.alignment profile-znf_b1h_alignment/ZNF484-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF484-202/pos_patterns.ENCSR471VAY_ChIP_ZNF484_HepG2_ENCSR669ZKJ_profile_pattern_3.n_137-vs-ZNF484-202.alignment profile-znf_b1h_alignment/ZNF484-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF484-202/pos_patterns.ENCSR471VAY_ChIP_ZNF484_HepG2_ENCSR669ZKJ_profile_pattern_4.n_134-vs-ZNF484-202.alignment profile-znf_b1h_alignment/ZNF484-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF484-202/pos_patterns.ENCSR471VAY_ChIP_ZNF484_HepG2_ENCSR669ZKJ_profile_pattern_5.n_94-vs-ZNF484-202.alignment profile-znf_b1h_alignment/ZNF484-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF484-202/pos_patterns.ENCSR471VAY_ChIP_ZNF484_HepG2_ENCSR669ZKJ_profile_pattern_6.n_94-vs-ZNF484-202.alignment profile-znf_b1h_alignment/ZNF484-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF484-202/pos_patterns.ENCSR471VAY_ChIP_ZNF484_HepG2_ENCSR669ZKJ_profile_pattern_7.n_69-vs-ZNF484-202.alignment profile-znf_b1h_alignment/ZNF484-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF484-202/pos_patterns.ENCSR471VAY_ChIP_ZNF484_HepG2_ENCSR669ZKJ_profile_pattern_8.n_59-vs-ZNF484-202.alignment profile-znf_b1h_alignment/ZNF484-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF484-202/pos_patterns.ENCSR471VAY_ChIP_ZNF484_HepG2_ENCSR669ZKJ_profile_pattern_9.n_53-vs-ZNF484-202.alignment profile-znf_b1h_alignment/ZNF484-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF485-201/ChipExo_models_ZNF485_profile-neg.pattern_0.n_24-vs-ZNF485-201.alignment profile-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF485-201/ChipExo_models_ZNF485_profile-neg.pattern_1.n_20-vs-ZNF485-201.alignment profile-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF485-201/ChipExo_models_ZNF485_profile-pos.pattern_0.n_8288-vs-ZNF485-201.alignment profile-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF485-201/ChipExo_models_ZNF485_profile-pos.pattern_1.n_693-vs-ZNF485-201.alignment profile-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF485-201/ChipExo_models_ZNF485_profile-pos.pattern_2.n_415-vs-ZNF485-201.alignment profile-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF485-201/ChipExo_models_ZNF485_profile-pos.pattern_3.n_37-vs-ZNF485-201.alignment profile-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF485-201/neg_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_profile_pattern_0.n_132-vs-ZNF485-201.alignment profile-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF485-201/neg_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_profile_pattern_1.n_120-vs-ZNF485-201.alignment profile-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF485-201/neg_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_profile_pattern_2.n_41-vs-ZNF485-201.alignment profile-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF485-201/neg_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_profile_pattern_3.n_28-vs-ZNF485-201.alignment profile-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF485-201/neg_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_profile_pattern_4.n_23-vs-ZNF485-201.alignment profile-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF485-201/neg_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_profile_pattern_5.n_21-vs-ZNF485-201.alignment profile-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF485-201/neg_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_profile_pattern_6.n_20-vs-ZNF485-201.alignment profile-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF485-201/pos_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_profile_pattern_0.n_1102-vs-ZNF485-201.alignment profile-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF485-201/pos_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_profile_pattern_10.n_146-vs-ZNF485-201.alignment profile-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF485-201/pos_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_profile_pattern_11.n_117-vs-ZNF485-201.alignment profile-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF485-201/pos_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_profile_pattern_12.n_116-vs-ZNF485-201.alignment profile-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF485-201/pos_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_profile_pattern_13.n_95-vs-ZNF485-201.alignment profile-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF485-201/pos_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_profile_pattern_14.n_61-vs-ZNF485-201.alignment profile-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF485-201/pos_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_profile_pattern_15.n_58-vs-ZNF485-201.alignment profile-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF485-201/pos_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_profile_pattern_16.n_55-vs-ZNF485-201.alignment profile-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF485-201/pos_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_profile_pattern_17.n_31-vs-ZNF485-201.alignment profile-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF485-201/pos_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_profile_pattern_18.n_24-vs-ZNF485-201.alignment profile-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF485-201/pos_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_profile_pattern_19.n_24-vs-ZNF485-201.alignment profile-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF485-201/pos_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_profile_pattern_1.n_876-vs-ZNF485-201.alignment profile-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF485-201/pos_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_profile_pattern_2.n_374-vs-ZNF485-201.alignment profile-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF485-201/pos_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_profile_pattern_3.n_335-vs-ZNF485-201.alignment profile-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF485-201/pos_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_profile_pattern_4.n_292-vs-ZNF485-201.alignment profile-znf_b1h_alignment/ZNF485-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF485-201/pos_patterns.ENCSR574UJE_ChIP_ZNF485_HepG2_ENCSR267KKW_profile_pattern_5.n_265-vs-ZNF485-201.alignment profile-znf_b1h_alignment/ZNF485-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF488-201/pos_patterns.ENCSR363XBR_ChIP_ZNF488_HEK293_ENCSR253RDI_profile_pattern_18.n_34-vs-ZNF488-201.alignment profile-znf_b1h_alignment/ZNF488-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF488-201/pos_patterns.ENCSR363XBR_ChIP_ZNF488_HEK293_ENCSR253RDI_profile_pattern_19.n_27-vs-ZNF488-201.alignment profile-znf_b1h_alignment/ZNF488-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF488-201/pos_patterns.ENCSR363XBR_ChIP_ZNF488_HEK293_ENCSR253RDI_profile_pattern_1.n_422-vs-ZNF488-201.alignment profile-znf_b1h_alignment/ZNF488-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF488-201/pos_patterns.ENCSR363XBR_ChIP_ZNF488_HEK293_ENCSR253RDI_profile_pattern_2.n_383-vs-ZNF488-201.alignment profile-znf_b1h_alignment/ZNF488-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF488-201/pos_patterns.ENCSR363XBR_ChIP_ZNF488_HEK293_ENCSR253RDI_profile_pattern_3.n_217-vs-ZNF488-201.alignment profile-znf_b1h_alignment/ZNF488-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF488-201/pos_patterns.ENCSR363XBR_ChIP_ZNF488_HEK293_ENCSR253RDI_profile_pattern_4.n_211-vs-ZNF488-201.alignment profile-znf_b1h_alignment/ZNF488-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF488-201/pos_patterns.ENCSR363XBR_ChIP_ZNF488_HEK293_ENCSR253RDI_profile_pattern_5.n_137-vs-ZNF488-201.alignment profile-znf_b1h_alignment/ZNF488-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF488-201/pos_patterns.ENCSR363XBR_ChIP_ZNF488_HEK293_ENCSR253RDI_profile_pattern_6.n_136-vs-ZNF488-201.alignment profile-znf_b1h_alignment/ZNF488-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF488-201/pos_patterns.ENCSR363XBR_ChIP_ZNF488_HEK293_ENCSR253RDI_profile_pattern_7.n_128-vs-ZNF488-201.alignment profile-znf_b1h_alignment/ZNF488-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF488-201/pos_patterns.ENCSR363XBR_ChIP_ZNF488_HEK293_ENCSR253RDI_profile_pattern_8.n_93-vs-ZNF488-201.alignment profile-znf_b1h_alignment/ZNF488-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF488-201/pos_patterns.ENCSR363XBR_ChIP_ZNF488_HEK293_ENCSR253RDI_profile_pattern_9.n_87-vs-ZNF488-201.alignment profile-znf_b1h_alignment/ZNF488-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF490-201/Hughes_GR_models_ZNF490_profile-neg.pattern_0.n_99-vs-ZNF490-201.alignment profile-znf_b1h_alignment/ZNF490-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF490-201/Hughes_GR_models_ZNF490_profile-neg.pattern_1.n_91-vs-ZNF490-201.alignment profile-znf_b1h_alignment/ZNF490-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF490-201/Hughes_GR_models_ZNF490_profile-neg.pattern_2.n_88-vs-ZNF490-201.alignment profile-znf_b1h_alignment/ZNF490-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF490-201/Hughes_GR_models_ZNF490_profile-neg.pattern_3.n_26-vs-ZNF490-201.alignment profile-znf_b1h_alignment/ZNF490-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF490-201/Hughes_GR_models_ZNF490_profile-pos.pattern_0.n_11290-vs-ZNF490-201.alignment profile-znf_b1h_alignment/ZNF490-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF490-201/neg_patterns.ENCSR542PZA_ChIP_ZNF490_HepG2_ENCSR594HLF_profile_pattern_0.n_223-vs-ZNF490-201.alignment profile-znf_b1h_alignment/ZNF490-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF490-201/neg_patterns.ENCSR542PZA_ChIP_ZNF490_HepG2_ENCSR594HLF_profile_pattern_10.n_23-vs-ZNF490-201.alignment profile-znf_b1h_alignment/ZNF490-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF490-201/neg_patterns.ENCSR542PZA_ChIP_ZNF490_HepG2_ENCSR594HLF_profile_pattern_11.n_20-vs-ZNF490-201.alignment profile-znf_b1h_alignment/ZNF490-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF490-201/neg_patterns.ENCSR542PZA_ChIP_ZNF490_HepG2_ENCSR594HLF_profile_pattern_1.n_129-vs-ZNF490-201.alignment profile-znf_b1h_alignment/ZNF490-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF490-201/neg_patterns.ENCSR542PZA_ChIP_ZNF490_HepG2_ENCSR594HLF_profile_pattern_2.n_87-vs-ZNF490-201.alignment profile-znf_b1h_alignment/ZNF490-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF490-201/neg_patterns.ENCSR542PZA_ChIP_ZNF490_HepG2_ENCSR594HLF_profile_pattern_3.n_71-vs-ZNF490-201.alignment profile-znf_b1h_alignment/ZNF490-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF490-201/neg_patterns.ENCSR542PZA_ChIP_ZNF490_HepG2_ENCSR594HLF_profile_pattern_4.n_69-vs-ZNF490-201.alignment profile-znf_b1h_alignment/ZNF490-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF490-201/neg_patterns.ENCSR542PZA_ChIP_ZNF490_HepG2_ENCSR594HLF_profile_pattern_5.n_53-vs-ZNF490-201.alignment profile-znf_b1h_alignment/ZNF490-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF490-201/neg_patterns.ENCSR542PZA_ChIP_ZNF490_HepG2_ENCSR594HLF_profile_pattern_6.n_48-vs-ZNF490-201.alignment profile-znf_b1h_alignment/ZNF490-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF490-201/neg_patterns.ENCSR542PZA_ChIP_ZNF490_HepG2_ENCSR594HLF_profile_pattern_7.n_48-vs-ZNF490-201.alignment profile-znf_b1h_alignment/ZNF490-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF490-201/neg_patterns.ENCSR542PZA_ChIP_ZNF490_HepG2_ENCSR594HLF_profile_pattern_8.n_27-vs-ZNF490-201.alignment profile-znf_b1h_alignment/ZNF490-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF490-201/neg_patterns.ENCSR542PZA_ChIP_ZNF490_HepG2_ENCSR594HLF_profile_pattern_9.n_24-vs-ZNF490-201.alignment profile-znf_b1h_alignment/ZNF490-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF490-201/pos_patterns.ENCSR542PZA_ChIP_ZNF490_HepG2_ENCSR594HLF_profile_pattern_0.n_1629-vs-ZNF490-201.alignment profile-znf_b1h_alignment/ZNF490-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF490-201/pos_patterns.ENCSR542PZA_ChIP_ZNF490_HepG2_ENCSR594HLF_profile_pattern_1.n_171-vs-ZNF490-201.alignment profile-znf_b1h_alignment/ZNF490-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF490-201/pos_patterns.ENCSR542PZA_ChIP_ZNF490_HepG2_ENCSR594HLF_profile_pattern_3.n_88-vs-ZNF490-201.alignment profile-znf_b1h_alignment/ZNF490-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF501-201/neg_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_profile_pattern_13.n_26-vs-ZNF501-201.alignment profile-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF501-201/neg_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_profile_pattern_1.n_84-vs-ZNF501-201.alignment profile-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF501-201/neg_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_profile_pattern_2.n_56-vs-ZNF501-201.alignment profile-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF501-201/neg_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_profile_pattern_3.n_55-vs-ZNF501-201.alignment profile-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF501-201/neg_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_profile_pattern_4.n_53-vs-ZNF501-201.alignment profile-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF501-201/neg_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_profile_pattern_5.n_46-vs-ZNF501-201.alignment profile-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF501-201/neg_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_profile_pattern_6.n_45-vs-ZNF501-201.alignment profile-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF501-201/neg_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_profile_pattern_7.n_44-vs-ZNF501-201.alignment profile-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF501-201/neg_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_profile_pattern_8.n_42-vs-ZNF501-201.alignment profile-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF501-201/neg_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_profile_pattern_9.n_36-vs-ZNF501-201.alignment profile-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF501-201/neg_patterns.ENCSR461ZJT_ChIP_ZNF501_HEK293_ENCSR479YFJ_profile_pattern_0.n_40-vs-ZNF501-201.alignment profile-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF501-201/neg_patterns.ENCSR461ZJT_ChIP_ZNF501_HEK293_ENCSR479YFJ_profile_pattern_1.n_29-vs-ZNF501-201.alignment profile-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_profile_pattern_0.n_4245-vs-ZNF501-201.alignment profile-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_profile_pattern_10.n_318-vs-ZNF501-201.alignment profile-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_profile_pattern_11.n_298-vs-ZNF501-201.alignment profile-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_profile_pattern_12.n_278-vs-ZNF501-201.alignment profile-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_profile_pattern_13.n_250-vs-ZNF501-201.alignment profile-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_profile_pattern_14.n_248-vs-ZNF501-201.alignment profile-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_profile_pattern_15.n_214-vs-ZNF501-201.alignment profile-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_profile_pattern_16.n_186-vs-ZNF501-201.alignment profile-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_profile_pattern_17.n_183-vs-ZNF501-201.alignment profile-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_profile_pattern_18.n_160-vs-ZNF501-201.alignment profile-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_profile_pattern_19.n_128-vs-ZNF501-201.alignment profile-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_profile_pattern_1.n_3977-vs-ZNF501-201.alignment profile-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_profile_pattern_20.n_120-vs-ZNF501-201.alignment profile-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_profile_pattern_21.n_90-vs-ZNF501-201.alignment profile-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_profile_pattern_22.n_76-vs-ZNF501-201.alignment profile-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_profile_pattern_23.n_66-vs-ZNF501-201.alignment profile-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_profile_pattern_24.n_66-vs-ZNF501-201.alignment profile-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_profile_pattern_25.n_55-vs-ZNF501-201.alignment profile-znf_b1h_alignment/ZNF501-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_profile_pattern_26.n_40-vs-ZNF501-201.alignment profile-znf_b1h_alignment/ZNF501-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF501-201/pos_patterns.ENCSR227PHM_ChIP_ZNF501_HepG2_ENCSR531PLV_profile_pattern_2.n_1700-vs-ZNF501-201.alignment profile-znf_b1h_alignment/ZNF501-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF507-201/neg_patterns.ENCSR577KQD_ChIP_ZNF507_K562_ENCSR347XXG_profile_pattern_1.n_76-vs-ZNF507-201.alignment profile-znf_b1h_alignment/ZNF507-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF507-201/neg_patterns.ENCSR577KQD_ChIP_ZNF507_K562_ENCSR347XXG_profile_pattern_3.n_45-vs-ZNF507-201.alignment profile-znf_b1h_alignment/ZNF507-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF507-201/neg_patterns.ENCSR577KQD_ChIP_ZNF507_K562_ENCSR347XXG_profile_pattern_4.n_37-vs-ZNF507-201.alignment profile-znf_b1h_alignment/ZNF507-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF510-201/pos_patterns.ENCSR695SLS_ChIP_ZNF510_HepG2_ENCSR522HFZ_profile_pattern_12.n_107-vs-ZNF510-201.alignment profile-znf_b1h_alignment/ZNF510-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512-201/neg_patterns.ENCSR264SRY_ChIP_ZNF512_HepG2_ENCSR097ZVU_profile_pattern_5.n_53-vs-ZNF512-201.alignment profile-znf_b1h_alignment/ZNF512-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512-201/neg_patterns.ENCSR264SRY_ChIP_ZNF512_HepG2_ENCSR097ZVU_profile_pattern_7.n_38-vs-ZNF512-201.alignment profile-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512-201/neg_patterns.ENCSR264SRY_ChIP_ZNF512_HepG2_ENCSR097ZVU_profile_pattern_8.n_36-vs-ZNF512-201.alignment profile-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512-201/neg_patterns.ENCSR264SRY_ChIP_ZNF512_HepG2_ENCSR097ZVU_profile_pattern_9.n_29-vs-ZNF512-201.alignment profile-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512-201/neg_patterns.ENCSR591CCL_ChIP_ZNF512_K562_ENCSR877KXA_profile_pattern_0.n_72-vs-ZNF512-201.alignment profile-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512-201/neg_patterns.ENCSR591CCL_ChIP_ZNF512_K562_ENCSR877KXA_profile_pattern_1.n_72-vs-ZNF512-201.alignment profile-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512-201/neg_patterns.ENCSR591CCL_ChIP_ZNF512_K562_ENCSR877KXA_profile_pattern_2.n_34-vs-ZNF512-201.alignment profile-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512-201/neg_patterns.ENCSR696URR_ChIP_ZNF512_K562_ENCSR702IRU_profile_pattern_0.n_51-vs-ZNF512-201.alignment profile-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512-201/neg_patterns.ENCSR696URR_ChIP_ZNF512_K562_ENCSR702IRU_profile_pattern_1.n_41-vs-ZNF512-201.alignment profile-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512-201/neg_patterns.ENCSR696URR_ChIP_ZNF512_K562_ENCSR702IRU_profile_pattern_2.n_33-vs-ZNF512-201.alignment profile-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512-201/neg_patterns.ENCSR696URR_ChIP_ZNF512_K562_ENCSR702IRU_profile_pattern_3.n_30-vs-ZNF512-201.alignment profile-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512-201/neg_patterns.ENCSR696URR_ChIP_ZNF512_K562_ENCSR702IRU_profile_pattern_4.n_30-vs-ZNF512-201.alignment profile-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR264SRY_ChIP_ZNF512_HepG2_ENCSR097ZVU_profile_pattern_0.n_756-vs-ZNF512-201.alignment profile-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR264SRY_ChIP_ZNF512_HepG2_ENCSR097ZVU_profile_pattern_10.n_38-vs-ZNF512-201.alignment profile-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR264SRY_ChIP_ZNF512_HepG2_ENCSR097ZVU_profile_pattern_1.n_661-vs-ZNF512-201.alignment profile-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR264SRY_ChIP_ZNF512_HepG2_ENCSR097ZVU_profile_pattern_2.n_259-vs-ZNF512-201.alignment profile-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR264SRY_ChIP_ZNF512_HepG2_ENCSR097ZVU_profile_pattern_3.n_230-vs-ZNF512-201.alignment profile-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR264SRY_ChIP_ZNF512_HepG2_ENCSR097ZVU_profile_pattern_4.n_221-vs-ZNF512-201.alignment profile-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR264SRY_ChIP_ZNF512_HepG2_ENCSR097ZVU_profile_pattern_5.n_214-vs-ZNF512-201.alignment profile-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR264SRY_ChIP_ZNF512_HepG2_ENCSR097ZVU_profile_pattern_6.n_185-vs-ZNF512-201.alignment profile-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR264SRY_ChIP_ZNF512_HepG2_ENCSR097ZVU_profile_pattern_7.n_100-vs-ZNF512-201.alignment profile-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR264SRY_ChIP_ZNF512_HepG2_ENCSR097ZVU_profile_pattern_8.n_91-vs-ZNF512-201.alignment profile-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR264SRY_ChIP_ZNF512_HepG2_ENCSR097ZVU_profile_pattern_9.n_85-vs-ZNF512-201.alignment profile-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR591CCL_ChIP_ZNF512_K562_ENCSR877KXA_profile_pattern_0.n_12590-vs-ZNF512-201.alignment profile-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR591CCL_ChIP_ZNF512_K562_ENCSR877KXA_profile_pattern_1.n_1718-vs-ZNF512-201.alignment profile-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR634WRC_ChIP_ZNF512_WTC11_ENCSR391WIQ_profile_pattern_0.n_695-vs-ZNF512-201.alignment profile-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR634WRC_ChIP_ZNF512_WTC11_ENCSR391WIQ_profile_pattern_10.n_76-vs-ZNF512-201.alignment profile-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR634WRC_ChIP_ZNF512_WTC11_ENCSR391WIQ_profile_pattern_1.n_578-vs-ZNF512-201.alignment profile-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR634WRC_ChIP_ZNF512_WTC11_ENCSR391WIQ_profile_pattern_2.n_310-vs-ZNF512-201.alignment profile-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR634WRC_ChIP_ZNF512_WTC11_ENCSR391WIQ_profile_pattern_3.n_259-vs-ZNF512-201.alignment profile-znf_b1h_alignment/ZNF512-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR634WRC_ChIP_ZNF512_WTC11_ENCSR391WIQ_profile_pattern_4.n_193-vs-ZNF512-201.alignment profile-znf_b1h_alignment/ZNF512-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512-201/pos_patterns.ENCSR634WRC_ChIP_ZNF512_WTC11_ENCSR391WIQ_profile_pattern_6.n_132-vs-ZNF512-201.alignment profile-znf_b1h_alignment/ZNF512-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512B-201/neg_patterns.ENCSR555DCF_ChIP_ZNF512B_MCF-7_ENCSR977OKO_profile_pattern_1.n_88-vs-ZNF512B-201.alignment profile-znf_b1h_alignment/ZNF512B-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512B-201/neg_patterns.ENCSR555DCF_ChIP_ZNF512B_MCF-7_ENCSR977OKO_profile_pattern_3.n_66-vs-ZNF512B-201.alignment profile-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512B-201/neg_patterns.ENCSR555DCF_ChIP_ZNF512B_MCF-7_ENCSR977OKO_profile_pattern_4.n_52-vs-ZNF512B-201.alignment profile-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512B-201/neg_patterns.ENCSR555DCF_ChIP_ZNF512B_MCF-7_ENCSR977OKO_profile_pattern_5.n_33-vs-ZNF512B-201.alignment profile-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512B-201/neg_patterns.ENCSR555DCF_ChIP_ZNF512B_MCF-7_ENCSR977OKO_profile_pattern_6.n_23-vs-ZNF512B-201.alignment profile-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512B-201/neg_patterns.ENCSR761LRR_ChIP_ZNF512B_MCF-7_ENCSR741WHN_profile_pattern_0.n_268-vs-ZNF512B-201.alignment profile-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512B-201/neg_patterns.ENCSR761LRR_ChIP_ZNF512B_MCF-7_ENCSR741WHN_profile_pattern_1.n_263-vs-ZNF512B-201.alignment profile-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512B-201/neg_patterns.ENCSR761LRR_ChIP_ZNF512B_MCF-7_ENCSR741WHN_profile_pattern_2.n_66-vs-ZNF512B-201.alignment profile-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512B-201/neg_patterns.ENCSR761LRR_ChIP_ZNF512B_MCF-7_ENCSR741WHN_profile_pattern_3.n_47-vs-ZNF512B-201.alignment profile-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512B-201/neg_patterns.ENCSR761LRR_ChIP_ZNF512B_MCF-7_ENCSR741WHN_profile_pattern_4.n_28-vs-ZNF512B-201.alignment profile-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512B-201/neg_patterns.ENCSR761LRR_ChIP_ZNF512B_MCF-7_ENCSR741WHN_profile_pattern_5.n_25-vs-ZNF512B-201.alignment profile-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512B-201/neg_patterns.ENCSR801SNX_ChIP_ZNF512B_HepG2_ENCSR478GME_profile_pattern_0.n_45-vs-ZNF512B-201.alignment profile-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512B-201/neg_patterns.ENCSR801SNX_ChIP_ZNF512B_HepG2_ENCSR478GME_profile_pattern_1.n_45-vs-ZNF512B-201.alignment profile-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR555DCF_ChIP_ZNF512B_MCF-7_ENCSR977OKO_profile_pattern_0.n_643-vs-ZNF512B-201.alignment profile-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR555DCF_ChIP_ZNF512B_MCF-7_ENCSR977OKO_profile_pattern_10.n_79-vs-ZNF512B-201.alignment profile-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR555DCF_ChIP_ZNF512B_MCF-7_ENCSR977OKO_profile_pattern_11.n_69-vs-ZNF512B-201.alignment profile-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR555DCF_ChIP_ZNF512B_MCF-7_ENCSR977OKO_profile_pattern_12.n_35-vs-ZNF512B-201.alignment profile-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR555DCF_ChIP_ZNF512B_MCF-7_ENCSR977OKO_profile_pattern_13.n_34-vs-ZNF512B-201.alignment profile-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR555DCF_ChIP_ZNF512B_MCF-7_ENCSR977OKO_profile_pattern_14.n_21-vs-ZNF512B-201.alignment profile-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR555DCF_ChIP_ZNF512B_MCF-7_ENCSR977OKO_profile_pattern_1.n_397-vs-ZNF512B-201.alignment profile-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR555DCF_ChIP_ZNF512B_MCF-7_ENCSR977OKO_profile_pattern_2.n_359-vs-ZNF512B-201.alignment profile-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR555DCF_ChIP_ZNF512B_MCF-7_ENCSR977OKO_profile_pattern_3.n_326-vs-ZNF512B-201.alignment profile-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR555DCF_ChIP_ZNF512B_MCF-7_ENCSR977OKO_profile_pattern_4.n_235-vs-ZNF512B-201.alignment profile-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR555DCF_ChIP_ZNF512B_MCF-7_ENCSR977OKO_profile_pattern_5.n_162-vs-ZNF512B-201.alignment profile-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR555DCF_ChIP_ZNF512B_MCF-7_ENCSR977OKO_profile_pattern_6.n_143-vs-ZNF512B-201.alignment profile-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR555DCF_ChIP_ZNF512B_MCF-7_ENCSR977OKO_profile_pattern_7.n_127-vs-ZNF512B-201.alignment profile-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR555DCF_ChIP_ZNF512B_MCF-7_ENCSR977OKO_profile_pattern_8.n_115-vs-ZNF512B-201.alignment profile-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR555DCF_ChIP_ZNF512B_MCF-7_ENCSR977OKO_profile_pattern_9.n_81-vs-ZNF512B-201.alignment profile-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR761LRR_ChIP_ZNF512B_MCF-7_ENCSR741WHN_profile_pattern_0.n_1602-vs-ZNF512B-201.alignment profile-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR761LRR_ChIP_ZNF512B_MCF-7_ENCSR741WHN_profile_pattern_10.n_112-vs-ZNF512B-201.alignment profile-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR761LRR_ChIP_ZNF512B_MCF-7_ENCSR741WHN_profile_pattern_11.n_100-vs-ZNF512B-201.alignment profile-znf_b1h_alignment/ZNF512B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR761LRR_ChIP_ZNF512B_MCF-7_ENCSR741WHN_profile_pattern_12.n_91-vs-ZNF512B-201.alignment profile-znf_b1h_alignment/ZNF512B-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR761LRR_ChIP_ZNF512B_MCF-7_ENCSR741WHN_profile_pattern_14.n_50-vs-ZNF512B-201.alignment profile-znf_b1h_alignment/ZNF512B-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF512B-201/pos_patterns.ENCSR801SNX_ChIP_ZNF512B_HepG2_ENCSR478GME_profile_pattern_9.n_189-vs-ZNF512B-201.alignment profile-znf_b1h_alignment/ZNF512B-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF513-201/neg_patterns.ENCSR503DPC_ChIP_ZNF513_HEK293_ENCSR717PMC_profile_pattern_10.n_50-vs-ZNF513-201.alignment profile-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF513-201/neg_patterns.ENCSR503DPC_ChIP_ZNF513_HEK293_ENCSR717PMC_profile_pattern_11.n_35-vs-ZNF513-201.alignment profile-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF513-201/neg_patterns.ENCSR503DPC_ChIP_ZNF513_HEK293_ENCSR717PMC_profile_pattern_12.n_34-vs-ZNF513-201.alignment profile-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF513-201/neg_patterns.ENCSR503DPC_ChIP_ZNF513_HEK293_ENCSR717PMC_profile_pattern_13.n_20-vs-ZNF513-201.alignment profile-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF513-201/neg_patterns.ENCSR503DPC_ChIP_ZNF513_HEK293_ENCSR717PMC_profile_pattern_1.n_521-vs-ZNF513-201.alignment profile-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF513-201/neg_patterns.ENCSR503DPC_ChIP_ZNF513_HEK293_ENCSR717PMC_profile_pattern_2.n_342-vs-ZNF513-201.alignment profile-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF513-201/neg_patterns.ENCSR503DPC_ChIP_ZNF513_HEK293_ENCSR717PMC_profile_pattern_3.n_251-vs-ZNF513-201.alignment profile-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF513-201/neg_patterns.ENCSR503DPC_ChIP_ZNF513_HEK293_ENCSR717PMC_profile_pattern_4.n_180-vs-ZNF513-201.alignment profile-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF513-201/neg_patterns.ENCSR503DPC_ChIP_ZNF513_HEK293_ENCSR717PMC_profile_pattern_5.n_101-vs-ZNF513-201.alignment profile-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF513-201/neg_patterns.ENCSR503DPC_ChIP_ZNF513_HEK293_ENCSR717PMC_profile_pattern_6.n_95-vs-ZNF513-201.alignment profile-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF513-201/neg_patterns.ENCSR503DPC_ChIP_ZNF513_HEK293_ENCSR717PMC_profile_pattern_7.n_67-vs-ZNF513-201.alignment profile-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF513-201/neg_patterns.ENCSR503DPC_ChIP_ZNF513_HEK293_ENCSR717PMC_profile_pattern_8.n_53-vs-ZNF513-201.alignment profile-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF513-201/neg_patterns.ENCSR503DPC_ChIP_ZNF513_HEK293_ENCSR717PMC_profile_pattern_9.n_52-vs-ZNF513-201.alignment profile-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF513-201/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_profile_pattern_0.n_239-vs-ZNF513-201.alignment profile-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF513-201/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_profile_pattern_10.n_102-vs-ZNF513-201.alignment profile-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF513-201/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_profile_pattern_11.n_100-vs-ZNF513-201.alignment profile-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF513-201/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_profile_pattern_12.n_87-vs-ZNF513-201.alignment profile-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF513-201/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_profile_pattern_13.n_83-vs-ZNF513-201.alignment profile-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF513-201/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_profile_pattern_14.n_81-vs-ZNF513-201.alignment profile-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF513-201/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_profile_pattern_15.n_63-vs-ZNF513-201.alignment profile-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF513-201/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_profile_pattern_16.n_62-vs-ZNF513-201.alignment profile-znf_b1h_alignment/ZNF513-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF513-201/pos_patterns.ENCSR171KUL_ChIP_ZNF513_HepG2_ENCSR301XQM_profile_pattern_17.n_41-vs-ZNF513-201.alignment profile-znf_b1h_alignment/ZNF513-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF513-202/pos_patterns.ENCSR503DPC_ChIP_ZNF513_HEK293_ENCSR717PMC_profile_pattern_5.n_183-vs-ZNF513-202.alignment profile-znf_b1h_alignment/ZNF513-202/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF513-202/pos_patterns.ENCSR503DPC_ChIP_ZNF513_HEK293_ENCSR717PMC_profile_pattern_8.n_47-vs-ZNF513-202.alignment profile-znf_b1h_alignment/ZNF513-202/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF521-201/pos_patterns.ENCSR665KYH_ChIP_ZNF521_HEK293_ENCSR221LRI_profile_pattern_0.n_147-vs-ZNF521-201.alignment profile-znf_b1h_alignment/ZNF521-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF521-201/pos_patterns.ENCSR665KYH_ChIP_ZNF521_HEK293_ENCSR221LRI_profile_pattern_3.n_72-vs-ZNF521-201.alignment profile-znf_b1h_alignment/ZNF521-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF521-201/pos_patterns.ENCSR665KYH_ChIP_ZNF521_HEK293_ENCSR221LRI_profile_pattern_4.n_26-vs-ZNF521-201.alignment profile-znf_b1h_alignment/ZNF521-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF521-202/pos_patterns.ENCSR665KYH_ChIP_ZNF521_HEK293_ENCSR221LRI_profile_pattern_0.n_147-vs-ZNF521-202.alignment profile-znf_b1h_alignment/ZNF521-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF521-202/pos_patterns.ENCSR665KYH_ChIP_ZNF521_HEK293_ENCSR221LRI_profile_pattern_1.n_135-vs-ZNF521-202.alignment profile-znf_b1h_alignment/ZNF521-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF521-202/pos_patterns.ENCSR665KYH_ChIP_ZNF521_HEK293_ENCSR221LRI_profile_pattern_2.n_85-vs-ZNF521-202.alignment profile-znf_b1h_alignment/ZNF521-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF521-202/pos_patterns.ENCSR665KYH_ChIP_ZNF521_HEK293_ENCSR221LRI_profile_pattern_3.n_72-vs-ZNF521-202.alignment profile-znf_b1h_alignment/ZNF521-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF521-202/pos_patterns.ENCSR665KYH_ChIP_ZNF521_HEK293_ENCSR221LRI_profile_pattern_4.n_26-vs-ZNF521-202.alignment profile-znf_b1h_alignment/ZNF521-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF524-201/Hughes_GR_models_ZNF524_profile-pos.pattern_0.n_461-vs-ZNF524-201.alignment profile-znf_b1h_alignment/ZNF524-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF525-201/ChipExo_models_ZNF525_profile-pos.pattern_0.n_71-vs-ZNF525-201.alignment profile-znf_b1h_alignment/ZNF525-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF525-201/ChipExo_models_ZNF525_profile-pos.pattern_1.n_56-vs-ZNF525-201.alignment profile-znf_b1h_alignment/ZNF525-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF525-201/ChipExo_models_ZNF525_profile-pos.pattern_2.n_54-vs-ZNF525-201.alignment profile-znf_b1h_alignment/ZNF525-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF525-201/ChipExo_models_ZNF525_profile-pos.pattern_3.n_48-vs-ZNF525-201.alignment profile-znf_b1h_alignment/ZNF525-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF525-201/ChipExo_models_ZNF525_profile-pos.pattern_4.n_45-vs-ZNF525-201.alignment profile-znf_b1h_alignment/ZNF525-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF525-201/ChipExo_models_ZNF525_profile-pos.pattern_5.n_37-vs-ZNF525-201.alignment profile-znf_b1h_alignment/ZNF525-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF525-201/ChipExo_models_ZNF525_profile-pos.pattern_6.n_28-vs-ZNF525-201.alignment profile-znf_b1h_alignment/ZNF525-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF525-201/ChipExo_models_ZNF525_profile-pos.pattern_7.n_22-vs-ZNF525-201.alignment profile-znf_b1h_alignment/ZNF525-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF526-201/neg_patterns.ENCSR608XRC_ChIP_ZNF526_HepG2_ENCSR770ZUH_profile_pattern_0.n_48-vs-ZNF526-201.alignment profile-znf_b1h_alignment/ZNF526-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF526-201/neg_patterns.ENCSR608XRC_ChIP_ZNF526_HepG2_ENCSR770ZUH_profile_pattern_1.n_43-vs-ZNF526-201.alignment profile-znf_b1h_alignment/ZNF526-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF526-201/neg_patterns.ENCSR608XRC_ChIP_ZNF526_HepG2_ENCSR770ZUH_profile_pattern_2.n_39-vs-ZNF526-201.alignment profile-znf_b1h_alignment/ZNF526-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF526-201/pos_patterns.ENCSR608XRC_ChIP_ZNF526_HepG2_ENCSR770ZUH_profile_pattern_0.n_2143-vs-ZNF526-201.alignment profile-znf_b1h_alignment/ZNF526-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF526-201/pos_patterns.ENCSR608XRC_ChIP_ZNF526_HepG2_ENCSR770ZUH_profile_pattern_10.n_27-vs-ZNF526-201.alignment profile-znf_b1h_alignment/ZNF526-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF526-201/pos_patterns.ENCSR608XRC_ChIP_ZNF526_HepG2_ENCSR770ZUH_profile_pattern_11.n_26-vs-ZNF526-201.alignment profile-znf_b1h_alignment/ZNF526-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF526-201/pos_patterns.ENCSR608XRC_ChIP_ZNF526_HepG2_ENCSR770ZUH_profile_pattern_2.n_688-vs-ZNF526-201.alignment profile-znf_b1h_alignment/ZNF526-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF526-201/pos_patterns.ENCSR608XRC_ChIP_ZNF526_HepG2_ENCSR770ZUH_profile_pattern_3.n_340-vs-ZNF526-201.alignment profile-znf_b1h_alignment/ZNF526-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF526-201/pos_patterns.ENCSR608XRC_ChIP_ZNF526_HepG2_ENCSR770ZUH_profile_pattern_4.n_293-vs-ZNF526-201.alignment profile-znf_b1h_alignment/ZNF526-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF526-201/pos_patterns.ENCSR608XRC_ChIP_ZNF526_HepG2_ENCSR770ZUH_profile_pattern_5.n_167-vs-ZNF526-201.alignment profile-znf_b1h_alignment/ZNF526-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF526-201/pos_patterns.ENCSR608XRC_ChIP_ZNF526_HepG2_ENCSR770ZUH_profile_pattern_6.n_139-vs-ZNF526-201.alignment profile-znf_b1h_alignment/ZNF526-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF526-201/pos_patterns.ENCSR608XRC_ChIP_ZNF526_HepG2_ENCSR770ZUH_profile_pattern_7.n_115-vs-ZNF526-201.alignment profile-znf_b1h_alignment/ZNF526-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF526-201/pos_patterns.ENCSR608XRC_ChIP_ZNF526_HepG2_ENCSR770ZUH_profile_pattern_9.n_40-vs-ZNF526-201.alignment profile-znf_b1h_alignment/ZNF526-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF527-201/pos_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_profile_pattern_10.n_154-vs-ZNF527-201.alignment profile-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF527-201/pos_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_profile_pattern_11.n_142-vs-ZNF527-201.alignment profile-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF527-201/pos_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_profile_pattern_12.n_139-vs-ZNF527-201.alignment profile-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF527-201/pos_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_profile_pattern_13.n_132-vs-ZNF527-201.alignment profile-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF527-201/pos_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_profile_pattern_14.n_60-vs-ZNF527-201.alignment profile-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF527-201/pos_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_profile_pattern_15.n_57-vs-ZNF527-201.alignment profile-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF527-201/pos_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_profile_pattern_16.n_54-vs-ZNF527-201.alignment profile-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF527-201/pos_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_profile_pattern_17.n_53-vs-ZNF527-201.alignment profile-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF527-201/pos_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_profile_pattern_18.n_40-vs-ZNF527-201.alignment profile-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF527-201/pos_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_profile_pattern_19.n_37-vs-ZNF527-201.alignment profile-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF527-201/pos_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_profile_pattern_1.n_1129-vs-ZNF527-201.alignment profile-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF527-201/pos_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_profile_pattern_20.n_35-vs-ZNF527-201.alignment profile-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF527-201/pos_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_profile_pattern_2.n_877-vs-ZNF527-201.alignment profile-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF527-201/pos_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_profile_pattern_3.n_378-vs-ZNF527-201.alignment profile-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF527-201/pos_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_profile_pattern_4.n_251-vs-ZNF527-201.alignment profile-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF527-201/pos_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_profile_pattern_5.n_248-vs-ZNF527-201.alignment profile-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF527-201/pos_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_profile_pattern_6.n_232-vs-ZNF527-201.alignment profile-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF527-201/pos_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_profile_pattern_7.n_202-vs-ZNF527-201.alignment profile-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF527-201/pos_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_profile_pattern_8.n_189-vs-ZNF527-201.alignment profile-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF527-201/pos_patterns.ENCSR656RTA_ChIP_ZNF527_HepG2_ENCSR618XQA_profile_pattern_9.n_172-vs-ZNF527-201.alignment profile-znf_b1h_alignment/ZNF527-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF528-201/ChipExo_models_ZNF528_profile-pos.pattern_0.n_1022-vs-ZNF528-201.alignment profile-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF528-201/ChipExo_models_ZNF528_profile-pos.pattern_1.n_162-vs-ZNF528-201.alignment profile-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF528-201/ChipExo_models_ZNF528_profile-pos.pattern_2.n_121-vs-ZNF528-201.alignment profile-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF528-201/ChipExo_models_ZNF528_profile-pos.pattern_3.n_106-vs-ZNF528-201.alignment profile-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF528-201/ChipExo_models_ZNF528_profile-pos.pattern_4.n_85-vs-ZNF528-201.alignment profile-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF528-201/ChipExo_models_ZNF528_profile-pos.pattern_5.n_37-vs-ZNF528-201.alignment profile-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF528-201/Hughes_GR_models_ZNF528_profile-neg.pattern_0.n_41-vs-ZNF528-201.alignment profile-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF528-201/Hughes_GR_models_ZNF528_profile-neg.pattern_1.n_40-vs-ZNF528-201.alignment profile-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF528-201/Hughes_GR_models_ZNF528_profile-pos.pattern_0.n_1421-vs-ZNF528-201.alignment profile-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF528-201/Hughes_GR_models_ZNF528_profile-pos.pattern_1.n_346-vs-ZNF528-201.alignment profile-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF528-201/Hughes_GR_models_ZNF528_profile-pos.pattern_2.n_188-vs-ZNF528-201.alignment profile-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF528-201/Hughes_GR_models_ZNF528_profile-pos.pattern_3.n_99-vs-ZNF528-201.alignment profile-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF528-201/Hughes_GR_models_ZNF528_profile-pos.pattern_4.n_37-vs-ZNF528-201.alignment profile-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF528-201/Hughes_NB_models_ZNF528_profile-pos.pattern_0.n_4839-vs-ZNF528-201.alignment profile-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF528-201/Hughes_NB_models_ZNF528_profile-pos.pattern_1.n_894-vs-ZNF528-201.alignment profile-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF528-201/Hughes_NB_models_ZNF528_profile-pos.pattern_2.n_500-vs-ZNF528-201.alignment profile-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF528-201/Hughes_NB_models_ZNF528_profile-pos.pattern_3.n_350-vs-ZNF528-201.alignment profile-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF528-201/Hughes_NB_models_ZNF528_profile-pos.pattern_4.n_71-vs-ZNF528-201.alignment profile-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF528-201/Hughes_NB_models_ZNF528_profile-pos.pattern_5.n_60-vs-ZNF528-201.alignment profile-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF528-201/Hughes_NB_models_ZNF528_profile-pos.pattern_6.n_39-vs-ZNF528-201.alignment profile-znf_b1h_alignment/ZNF528-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF529-209/ChipExo_models_ZNF529_profile-neg.pattern_0.n_48-vs-ZNF529-209.alignment profile-znf_b1h_alignment/ZNF529-209/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF529-209/ChipExo_models_ZNF529_profile-neg.pattern_2.n_21-vs-ZNF529-209.alignment profile-znf_b1h_alignment/ZNF529-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF529-209/ChipExo_models_ZNF529_profile-pos.pattern_0.n_227-vs-ZNF529-209.alignment profile-znf_b1h_alignment/ZNF529-209/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF529-209/ChipExo_models_ZNF529_profile-pos.pattern_1.n_35-vs-ZNF529-209.alignment profile-znf_b1h_alignment/ZNF529-209/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF530-201/neg_patterns.ENCSR701RXW_ChIP_ZNF530_HEK293_ENCSR154RFY_profile_pattern_7.n_21-vs-ZNF530-201.alignment profile-znf_b1h_alignment/ZNF530-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF530-201/pos_patterns.ENCSR013DKM_ChIP_ZNF530_HepG2_ENCSR290MQH_profile_pattern_0.n_199-vs-ZNF530-201.alignment profile-znf_b1h_alignment/ZNF530-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF530-201/pos_patterns.ENCSR013DKM_ChIP_ZNF530_HepG2_ENCSR290MQH_profile_pattern_10.n_25-vs-ZNF530-201.alignment profile-znf_b1h_alignment/ZNF530-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF530-201/pos_patterns.ENCSR013DKM_ChIP_ZNF530_HepG2_ENCSR290MQH_profile_pattern_11.n_23-vs-ZNF530-201.alignment profile-znf_b1h_alignment/ZNF530-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF530-201/pos_patterns.ENCSR013DKM_ChIP_ZNF530_HepG2_ENCSR290MQH_profile_pattern_1.n_163-vs-ZNF530-201.alignment profile-znf_b1h_alignment/ZNF530-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF530-201/pos_patterns.ENCSR013DKM_ChIP_ZNF530_HepG2_ENCSR290MQH_profile_pattern_3.n_75-vs-ZNF530-201.alignment profile-znf_b1h_alignment/ZNF530-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF530-201/pos_patterns.ENCSR013DKM_ChIP_ZNF530_HepG2_ENCSR290MQH_profile_pattern_4.n_68-vs-ZNF530-201.alignment profile-znf_b1h_alignment/ZNF530-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF530-201/pos_patterns.ENCSR013DKM_ChIP_ZNF530_HepG2_ENCSR290MQH_profile_pattern_5.n_67-vs-ZNF530-201.alignment profile-znf_b1h_alignment/ZNF530-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF530-201/pos_patterns.ENCSR013DKM_ChIP_ZNF530_HepG2_ENCSR290MQH_profile_pattern_8.n_50-vs-ZNF530-201.alignment profile-znf_b1h_alignment/ZNF530-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF530-201/pos_patterns.ENCSR701RXW_ChIP_ZNF530_HEK293_ENCSR154RFY_profile_pattern_1.n_665-vs-ZNF530-201.alignment profile-znf_b1h_alignment/ZNF530-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF530-201/pos_patterns.ENCSR701RXW_ChIP_ZNF530_HEK293_ENCSR154RFY_profile_pattern_3.n_137-vs-ZNF530-201.alignment profile-znf_b1h_alignment/ZNF530-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF530-201/pos_patterns.ENCSR701RXW_ChIP_ZNF530_HEK293_ENCSR154RFY_profile_pattern_5.n_36-vs-ZNF530-201.alignment profile-znf_b1h_alignment/ZNF530-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF532-201/neg_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_profile_pattern_0.n_61-vs-ZNF532-201.alignment profile-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF532-201/neg_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_profile_pattern_1.n_52-vs-ZNF532-201.alignment profile-znf_b1h_alignment/ZNF532-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF532-201/neg_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_profile_pattern_3.n_47-vs-ZNF532-201.alignment profile-znf_b1h_alignment/ZNF532-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF532-201/pos_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_profile_pattern_0.n_383-vs-ZNF532-201.alignment profile-znf_b1h_alignment/ZNF532-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF532-201/pos_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_profile_pattern_11.n_94-vs-ZNF532-201.alignment profile-znf_b1h_alignment/ZNF532-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF532-201/pos_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_profile_pattern_14.n_41-vs-ZNF532-201.alignment profile-znf_b1h_alignment/ZNF532-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF532-201/pos_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_profile_pattern_3.n_159-vs-ZNF532-201.alignment profile-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF532-201/pos_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_profile_pattern_4.n_133-vs-ZNF532-201.alignment profile-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF532-201/pos_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_profile_pattern_5.n_132-vs-ZNF532-201.alignment profile-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF532-201/pos_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_profile_pattern_6.n_129-vs-ZNF532-201.alignment profile-znf_b1h_alignment/ZNF532-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF532-201/pos_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_profile_pattern_8.n_124-vs-ZNF532-201.alignment profile-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF532-201/pos_patterns.ENCSR444BFV_ChIP_ZNF532_WTC11_ENCSR409VOR_profile_pattern_9.n_119-vs-ZNF532-201.alignment profile-znf_b1h_alignment/ZNF532-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF534-202/ChipExo_models_ZNF534_profile-pos.pattern_0.n_13599-vs-ZNF534-202.alignment profile-znf_b1h_alignment/ZNF534-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF534-202/ChipExo_models_ZNF534_profile-pos.pattern_1.n_12600-vs-ZNF534-202.alignment profile-znf_b1h_alignment/ZNF534-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF534-202/ChipExo_models_ZNF534_profile-pos.pattern_2.n_1900-vs-ZNF534-202.alignment profile-znf_b1h_alignment/ZNF534-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF534-202/ChipExo_models_ZNF534_profile-pos.pattern_3.n_128-vs-ZNF534-202.alignment profile-znf_b1h_alignment/ZNF534-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF534-202/ChipExo_models_ZNF534_profile-pos.pattern_4.n_71-vs-ZNF534-202.alignment profile-znf_b1h_alignment/ZNF534-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF534-202/ChipExo_models_ZNF534_profile-pos.pattern_5.n_22-vs-ZNF534-202.alignment profile-znf_b1h_alignment/ZNF534-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF540-201/ChipExo_models_ZNF540_profile-pos.pattern_0.n_41-vs-ZNF540-201.alignment profile-znf_b1h_alignment/ZNF540-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF540-201/ChipExo_models_ZNF540_profile-pos.pattern_1.n_27-vs-ZNF540-201.alignment profile-znf_b1h_alignment/ZNF540-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF543-201/ChipExo_models_ZNF543_profile-pos.pattern_0.n_829-vs-ZNF543-201.alignment profile-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF543-201/ChipExo_models_ZNF543_profile-pos.pattern_1.n_123-vs-ZNF543-201.alignment profile-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF543-201/ChipExo_models_ZNF543_profile-pos.pattern_2.n_118-vs-ZNF543-201.alignment profile-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF543-201/ChipExo_models_ZNF543_profile-pos.pattern_3.n_108-vs-ZNF543-201.alignment profile-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF543-201/ChipExo_models_ZNF543_profile-pos.pattern_4.n_108-vs-ZNF543-201.alignment profile-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF543-201/ChipExo_models_ZNF543_profile-pos.pattern_5.n_92-vs-ZNF543-201.alignment profile-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF543-201/ChipExo_models_ZNF543_profile-pos.pattern_6.n_92-vs-ZNF543-201.alignment profile-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF543-201/ChipExo_models_ZNF543_profile-pos.pattern_7.n_63-vs-ZNF543-201.alignment profile-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF543-201/ChipExo_models_ZNF543_profile-pos.pattern_8.n_43-vs-ZNF543-201.alignment profile-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF543-201/ChipExo_models_ZNF543_profile-pos.pattern_9.n_20-vs-ZNF543-201.alignment profile-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF543-201/Hughes_GR_models_ZNF543_profile-neg.pattern_0.n_32-vs-ZNF543-201.alignment profile-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF543-201/Hughes_GR_models_ZNF543_profile-neg.pattern_1.n_31-vs-ZNF543-201.alignment profile-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF543-201/Hughes_GR_models_ZNF543_profile-neg.pattern_2.n_26-vs-ZNF543-201.alignment profile-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF543-201/Hughes_GR_models_ZNF543_profile-neg.pattern_3.n_23-vs-ZNF543-201.alignment profile-znf_b1h_alignment/ZNF543-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF543-201/Hughes_GR_models_ZNF543_profile-neg.pattern_4.n_21-vs-ZNF543-201.alignment profile-znf_b1h_alignment/ZNF543-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF543-201/Hughes_GR_models_ZNF543_profile-pos.pattern_0.n_32-vs-ZNF543-201.alignment profile-znf_b1h_alignment/ZNF543-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF543-201/Hughes_GR_models_ZNF543_profile-pos.pattern_4.n_23-vs-ZNF543-201.alignment profile-znf_b1h_alignment/ZNF543-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF543-201/neg_patterns.ENCSR584DEL_ChIP_ZNF543_HepG2_ENCSR077CRE_profile_pattern_1.n_48-vs-ZNF543-201.alignment profile-znf_b1h_alignment/ZNF543-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF543-201/neg_patterns.ENCSR584DEL_ChIP_ZNF543_HepG2_ENCSR077CRE_profile_pattern_3.n_46-vs-ZNF543-201.alignment profile-znf_b1h_alignment/ZNF543-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF544-201/neg_patterns.ENCSR167XFW_ChIP_ZNF544_HEK293_ENCSR503MUG_profile_pattern_4.n_22-vs-ZNF544-201.alignment profile-znf_b1h_alignment/ZNF544-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF544-201/neg_patterns.ENCSR167XFW_ChIP_ZNF544_HEK293_ENCSR503MUG_profile_pattern_5.n_20-vs-ZNF544-201.alignment profile-znf_b1h_alignment/ZNF544-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF544-201/pos_patterns.ENCSR167XFW_ChIP_ZNF544_HEK293_ENCSR503MUG_profile_pattern_0.n_552-vs-ZNF544-201.alignment profile-znf_b1h_alignment/ZNF544-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF544-201/pos_patterns.ENCSR167XFW_ChIP_ZNF544_HEK293_ENCSR503MUG_profile_pattern_1.n_391-vs-ZNF544-201.alignment profile-znf_b1h_alignment/ZNF544-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF544-201/pos_patterns.ENCSR167XFW_ChIP_ZNF544_HEK293_ENCSR503MUG_profile_pattern_2.n_259-vs-ZNF544-201.alignment profile-znf_b1h_alignment/ZNF544-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF544-201/pos_patterns.ENCSR167XFW_ChIP_ZNF544_HEK293_ENCSR503MUG_profile_pattern_3.n_70-vs-ZNF544-201.alignment profile-znf_b1h_alignment/ZNF544-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF544-201/pos_patterns.ENCSR167XFW_ChIP_ZNF544_HEK293_ENCSR503MUG_profile_pattern_4.n_33-vs-ZNF544-201.alignment profile-znf_b1h_alignment/ZNF544-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF546-201/pos_patterns.ENCSR782WWY_ChIP_ZNF546_HepG2_ENCSR420WEB_profile_pattern_10.n_115-vs-ZNF546-201.alignment profile-znf_b1h_alignment/ZNF546-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF546-201/pos_patterns.ENCSR782WWY_ChIP_ZNF546_HepG2_ENCSR420WEB_profile_pattern_11.n_108-vs-ZNF546-201.alignment profile-znf_b1h_alignment/ZNF546-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF546-201/pos_patterns.ENCSR782WWY_ChIP_ZNF546_HepG2_ENCSR420WEB_profile_pattern_12.n_92-vs-ZNF546-201.alignment profile-znf_b1h_alignment/ZNF546-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF546-201/pos_patterns.ENCSR782WWY_ChIP_ZNF546_HepG2_ENCSR420WEB_profile_pattern_13.n_84-vs-ZNF546-201.alignment profile-znf_b1h_alignment/ZNF546-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF546-201/pos_patterns.ENCSR782WWY_ChIP_ZNF546_HepG2_ENCSR420WEB_profile_pattern_14.n_83-vs-ZNF546-201.alignment profile-znf_b1h_alignment/ZNF546-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF546-201/pos_patterns.ENCSR782WWY_ChIP_ZNF546_HepG2_ENCSR420WEB_profile_pattern_15.n_59-vs-ZNF546-201.alignment profile-znf_b1h_alignment/ZNF546-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF546-201/pos_patterns.ENCSR782WWY_ChIP_ZNF546_HepG2_ENCSR420WEB_profile_pattern_17.n_32-vs-ZNF546-201.alignment profile-znf_b1h_alignment/ZNF546-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_profile_pattern_11.n_205-vs-ZNF547-201.alignment profile-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_profile_pattern_12.n_178-vs-ZNF547-201.alignment profile-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_profile_pattern_13.n_64-vs-ZNF547-201.alignment profile-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_profile_pattern_14.n_50-vs-ZNF547-201.alignment profile-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_profile_pattern_15.n_40-vs-ZNF547-201.alignment profile-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_profile_pattern_16.n_23-vs-ZNF547-201.alignment profile-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_profile_pattern_17.n_21-vs-ZNF547-201.alignment profile-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_profile_pattern_1.n_1713-vs-ZNF547-201.alignment profile-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_profile_pattern_2.n_1602-vs-ZNF547-201.alignment profile-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_profile_pattern_3.n_1591-vs-ZNF547-201.alignment profile-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_profile_pattern_4.n_1248-vs-ZNF547-201.alignment profile-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_profile_pattern_5.n_891-vs-ZNF547-201.alignment profile-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_profile_pattern_6.n_463-vs-ZNF547-201.alignment profile-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_profile_pattern_7.n_436-vs-ZNF547-201.alignment profile-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_profile_pattern_8.n_339-vs-ZNF547-201.alignment profile-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF547-201/pos_patterns.ENCSR964ZJC_ChIP_ZNF547_HepG2_ENCSR557JRW_profile_pattern_9.n_336-vs-ZNF547-201.alignment profile-znf_b1h_alignment/ZNF547-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF548-201/ChipExo_models_ZNF548_profile-pos.pattern_0.n_108-vs-ZNF548-201.alignment profile-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF548-201/ChipExo_models_ZNF548_profile-pos.pattern_1.n_108-vs-ZNF548-201.alignment profile-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF548-201/ChipExo_models_ZNF548_profile-pos.pattern_2.n_98-vs-ZNF548-201.alignment profile-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF548-201/ChipExo_models_ZNF548_profile-pos.pattern_3.n_48-vs-ZNF548-201.alignment profile-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF548-201/ChipExo_models_ZNF548_profile-pos.pattern_4.n_31-vs-ZNF548-201.alignment profile-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF548-201/ChipExo_models_ZNF548_profile-pos.pattern_5.n_26-vs-ZNF548-201.alignment profile-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF548-201/neg_patterns.ENCSR756UNW_ChIP_ZNF548_HepG2_ENCSR055QWT_profile_pattern_0.n_143-vs-ZNF548-201.alignment profile-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF548-201/neg_patterns.ENCSR756UNW_ChIP_ZNF548_HepG2_ENCSR055QWT_profile_pattern_1.n_100-vs-ZNF548-201.alignment profile-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF548-201/neg_patterns.ENCSR756UNW_ChIP_ZNF548_HepG2_ENCSR055QWT_profile_pattern_2.n_74-vs-ZNF548-201.alignment profile-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF548-201/neg_patterns.ENCSR756UNW_ChIP_ZNF548_HepG2_ENCSR055QWT_profile_pattern_3.n_39-vs-ZNF548-201.alignment profile-znf_b1h_alignment/ZNF548-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF548-201/neg_patterns.ENCSR756UNW_ChIP_ZNF548_HepG2_ENCSR055QWT_profile_pattern_5.n_25-vs-ZNF548-201.alignment profile-znf_b1h_alignment/ZNF548-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF548-201/pos_patterns.ENCSR756UNW_ChIP_ZNF548_HepG2_ENCSR055QWT_profile_pattern_3.n_383-vs-ZNF548-201.alignment profile-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF548-201/pos_patterns.ENCSR756UNW_ChIP_ZNF548_HepG2_ENCSR055QWT_profile_pattern_4.n_358-vs-ZNF548-201.alignment profile-znf_b1h_alignment/ZNF548-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF548-201/pos_patterns.ENCSR756UNW_ChIP_ZNF548_HepG2_ENCSR055QWT_profile_pattern_6.n_315-vs-ZNF548-201.alignment profile-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF548-201/pos_patterns.ENCSR756UNW_ChIP_ZNF548_HepG2_ENCSR055QWT_profile_pattern_7.n_305-vs-ZNF548-201.alignment profile-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF548-201/pos_patterns.ENCSR756UNW_ChIP_ZNF548_HepG2_ENCSR055QWT_profile_pattern_8.n_303-vs-ZNF548-201.alignment profile-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF548-201/pos_patterns.ENCSR756UNW_ChIP_ZNF548_HepG2_ENCSR055QWT_profile_pattern_9.n_303-vs-ZNF548-201.alignment profile-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF548-201/pos_patterns.ENCSR892ZTO_ChIP_ZNF548_HEK293_ENCSR293AOG_profile_pattern_0.n_1124-vs-ZNF548-201.alignment profile-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF548-201/pos_patterns.ENCSR892ZTO_ChIP_ZNF548_HEK293_ENCSR293AOG_profile_pattern_1.n_937-vs-ZNF548-201.alignment profile-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF548-201/pos_patterns.ENCSR892ZTO_ChIP_ZNF548_HEK293_ENCSR293AOG_profile_pattern_2.n_265-vs-ZNF548-201.alignment profile-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF548-201/pos_patterns.ENCSR892ZTO_ChIP_ZNF548_HEK293_ENCSR293AOG_profile_pattern_3.n_150-vs-ZNF548-201.alignment profile-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF548-201/pos_patterns.ENCSR892ZTO_ChIP_ZNF548_HEK293_ENCSR293AOG_profile_pattern_4.n_116-vs-ZNF548-201.alignment profile-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF548-201/pos_patterns.ENCSR892ZTO_ChIP_ZNF548_HEK293_ENCSR293AOG_profile_pattern_5.n_89-vs-ZNF548-201.alignment profile-znf_b1h_alignment/ZNF548-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF548-201/pos_patterns.ENCSR892ZTO_ChIP_ZNF548_HEK293_ENCSR293AOG_profile_pattern_7.n_72-vs-ZNF548-201.alignment profile-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF548-201/pos_patterns.ENCSR892ZTO_ChIP_ZNF548_HEK293_ENCSR293AOG_profile_pattern_8.n_27-vs-ZNF548-201.alignment profile-znf_b1h_alignment/ZNF548-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF548-201/pos_patterns.ENCSR892ZTO_ChIP_ZNF548_HEK293_ENCSR293AOG_profile_pattern_9.n_21-vs-ZNF548-201.alignment profile-znf_b1h_alignment/ZNF548-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF549-201/ChipExo_models_ZNF549_profile-pos.pattern_8.n_32-vs-ZNF549-201.alignment profile-znf_b1h_alignment/ZNF549-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF550-201/pos_patterns.ENCSR198BHH_ChIP_ZNF550_HepG2_ENCSR079FFV_profile_pattern_3.n_182-vs-ZNF550-201.alignment profile-znf_b1h_alignment/ZNF550-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF550-201/pos_patterns.ENCSR198BHH_ChIP_ZNF550_HepG2_ENCSR079FFV_profile_pattern_4.n_115-vs-ZNF550-201.alignment profile-znf_b1h_alignment/ZNF550-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF550-201/pos_patterns.ENCSR198BHH_ChIP_ZNF550_HepG2_ENCSR079FFV_profile_pattern_7.n_36-vs-ZNF550-201.alignment profile-znf_b1h_alignment/ZNF550-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF552-201/pos_patterns.ENCSR448RAP_ChIP_ZNF552_HepG2_ENCSR388KPL_profile_pattern_18.n_21-vs-ZNF552-201.alignment profile-znf_b1h_alignment/ZNF552-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF552-201/pos_patterns.ENCSR448RAP_ChIP_ZNF552_HepG2_ENCSR388KPL_profile_pattern_4.n_249-vs-ZNF552-201.alignment profile-znf_b1h_alignment/ZNF552-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF555-201/ChipExo_models_ZNF555_profile-pos.pattern_0.n_168-vs-ZNF555-201.alignment profile-znf_b1h_alignment/ZNF555-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF555-201/ChipExo_models_ZNF555_profile-pos.pattern_1.n_82-vs-ZNF555-201.alignment profile-znf_b1h_alignment/ZNF555-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF555-201/ChipExo_models_ZNF555_profile-pos.pattern_2.n_57-vs-ZNF555-201.alignment profile-znf_b1h_alignment/ZNF555-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF555-201/ChipExo_models_ZNF555_profile-pos.pattern_3.n_49-vs-ZNF555-201.alignment profile-znf_b1h_alignment/ZNF555-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF555-201/ChipExo_models_ZNF555_profile-pos.pattern_4.n_45-vs-ZNF555-201.alignment profile-znf_b1h_alignment/ZNF555-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF555-201/ChipExo_models_ZNF555_profile-pos.pattern_5.n_41-vs-ZNF555-201.alignment profile-znf_b1h_alignment/ZNF555-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF556-201/neg_patterns.ENCSR644WQN_ChIP_ZNF556_HepG2_ENCSR879SLJ_profile_pattern_6.n_30-vs-ZNF556-201.alignment profile-znf_b1h_alignment/ZNF556-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF556-201/pos_patterns.ENCSR644WQN_ChIP_ZNF556_HepG2_ENCSR879SLJ_profile_pattern_10.n_272-vs-ZNF556-201.alignment profile-znf_b1h_alignment/ZNF556-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF556-201/pos_patterns.ENCSR644WQN_ChIP_ZNF556_HepG2_ENCSR879SLJ_profile_pattern_11.n_257-vs-ZNF556-201.alignment profile-znf_b1h_alignment/ZNF556-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF556-201/pos_patterns.ENCSR644WQN_ChIP_ZNF556_HepG2_ENCSR879SLJ_profile_pattern_12.n_252-vs-ZNF556-201.alignment profile-znf_b1h_alignment/ZNF556-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF556-201/pos_patterns.ENCSR644WQN_ChIP_ZNF556_HepG2_ENCSR879SLJ_profile_pattern_13.n_245-vs-ZNF556-201.alignment profile-znf_b1h_alignment/ZNF556-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF556-201/pos_patterns.ENCSR644WQN_ChIP_ZNF556_HepG2_ENCSR879SLJ_profile_pattern_14.n_224-vs-ZNF556-201.alignment profile-znf_b1h_alignment/ZNF556-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF556-201/pos_patterns.ENCSR644WQN_ChIP_ZNF556_HepG2_ENCSR879SLJ_profile_pattern_15.n_157-vs-ZNF556-201.alignment profile-znf_b1h_alignment/ZNF556-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF556-201/pos_patterns.ENCSR644WQN_ChIP_ZNF556_HepG2_ENCSR879SLJ_profile_pattern_16.n_152-vs-ZNF556-201.alignment profile-znf_b1h_alignment/ZNF556-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF556-201/pos_patterns.ENCSR644WQN_ChIP_ZNF556_HepG2_ENCSR879SLJ_profile_pattern_17.n_141-vs-ZNF556-201.alignment profile-znf_b1h_alignment/ZNF556-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF556-201/pos_patterns.ENCSR644WQN_ChIP_ZNF556_HepG2_ENCSR879SLJ_profile_pattern_18.n_109-vs-ZNF556-201.alignment profile-znf_b1h_alignment/ZNF556-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF556-201/pos_patterns.ENCSR644WQN_ChIP_ZNF556_HepG2_ENCSR879SLJ_profile_pattern_19.n_88-vs-ZNF556-201.alignment profile-znf_b1h_alignment/ZNF556-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF556-201/pos_patterns.ENCSR644WQN_ChIP_ZNF556_HepG2_ENCSR879SLJ_profile_pattern_1.n_1975-vs-ZNF556-201.alignment profile-znf_b1h_alignment/ZNF556-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF556-201/pos_patterns.ENCSR644WQN_ChIP_ZNF556_HepG2_ENCSR879SLJ_profile_pattern_20.n_70-vs-ZNF556-201.alignment profile-znf_b1h_alignment/ZNF556-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF556-201/pos_patterns.ENCSR644WQN_ChIP_ZNF556_HepG2_ENCSR879SLJ_profile_pattern_21.n_38-vs-ZNF556-201.alignment profile-znf_b1h_alignment/ZNF556-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF556-201/pos_patterns.ENCSR644WQN_ChIP_ZNF556_HepG2_ENCSR879SLJ_profile_pattern_2.n_1595-vs-ZNF556-201.alignment profile-znf_b1h_alignment/ZNF556-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF556-201/pos_patterns.ENCSR644WQN_ChIP_ZNF556_HepG2_ENCSR879SLJ_profile_pattern_3.n_1119-vs-ZNF556-201.alignment profile-znf_b1h_alignment/ZNF556-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF556-201/pos_patterns.ENCSR644WQN_ChIP_ZNF556_HepG2_ENCSR879SLJ_profile_pattern_4.n_816-vs-ZNF556-201.alignment profile-znf_b1h_alignment/ZNF556-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF556-201/pos_patterns.ENCSR644WQN_ChIP_ZNF556_HepG2_ENCSR879SLJ_profile_pattern_5.n_775-vs-ZNF556-201.alignment profile-znf_b1h_alignment/ZNF556-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF556-201/pos_patterns.ENCSR644WQN_ChIP_ZNF556_HepG2_ENCSR879SLJ_profile_pattern_6.n_661-vs-ZNF556-201.alignment profile-znf_b1h_alignment/ZNF556-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF556-201/pos_patterns.ENCSR644WQN_ChIP_ZNF556_HepG2_ENCSR879SLJ_profile_pattern_7.n_392-vs-ZNF556-201.alignment profile-znf_b1h_alignment/ZNF556-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF556-201/pos_patterns.ENCSR644WQN_ChIP_ZNF556_HepG2_ENCSR879SLJ_profile_pattern_8.n_379-vs-ZNF556-201.alignment profile-znf_b1h_alignment/ZNF556-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF556-201/pos_patterns.ENCSR644WQN_ChIP_ZNF556_HepG2_ENCSR879SLJ_profile_pattern_9.n_333-vs-ZNF556-201.alignment profile-znf_b1h_alignment/ZNF556-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF557-201/ChipExo_models_ZNF557_profile-pos.pattern_0.n_102-vs-ZNF557-201.alignment profile-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF557-201/ChipExo_models_ZNF557_profile-pos.pattern_10.n_29-vs-ZNF557-201.alignment profile-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF557-201/ChipExo_models_ZNF557_profile-pos.pattern_11.n_29-vs-ZNF557-201.alignment profile-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF557-201/ChipExo_models_ZNF557_profile-pos.pattern_12.n_25-vs-ZNF557-201.alignment profile-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF557-201/ChipExo_models_ZNF557_profile-pos.pattern_13.n_25-vs-ZNF557-201.alignment profile-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF557-201/ChipExo_models_ZNF557_profile-pos.pattern_14.n_25-vs-ZNF557-201.alignment profile-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF557-201/ChipExo_models_ZNF557_profile-pos.pattern_15.n_21-vs-ZNF557-201.alignment profile-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF557-201/ChipExo_models_ZNF557_profile-pos.pattern_16.n_20-vs-ZNF557-201.alignment profile-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF557-201/ChipExo_models_ZNF557_profile-pos.pattern_17.n_20-vs-ZNF557-201.alignment profile-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF557-201/ChipExo_models_ZNF557_profile-pos.pattern_1.n_68-vs-ZNF557-201.alignment profile-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF557-201/ChipExo_models_ZNF557_profile-pos.pattern_2.n_57-vs-ZNF557-201.alignment profile-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF557-201/ChipExo_models_ZNF557_profile-pos.pattern_3.n_56-vs-ZNF557-201.alignment profile-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF557-201/ChipExo_models_ZNF557_profile-pos.pattern_4.n_52-vs-ZNF557-201.alignment profile-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF557-201/ChipExo_models_ZNF557_profile-pos.pattern_5.n_48-vs-ZNF557-201.alignment profile-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF557-201/ChipExo_models_ZNF557_profile-pos.pattern_6.n_47-vs-ZNF557-201.alignment profile-znf_b1h_alignment/ZNF557-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF557-201/ChipExo_models_ZNF557_profile-pos.pattern_8.n_36-vs-ZNF557-201.alignment profile-znf_b1h_alignment/ZNF557-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF557-201/ChipExo_models_ZNF557_profile-pos.pattern_9.n_35-vs-ZNF557-201.alignment profile-znf_b1h_alignment/ZNF557-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF558-201/ChipExo_models_ZNF558_profile-pos.pattern_0.n_325-vs-ZNF558-201.alignment profile-znf_b1h_alignment/ZNF558-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF558-201/ChipExo_models_ZNF558_profile-pos.pattern_4.n_51-vs-ZNF558-201.alignment profile-znf_b1h_alignment/ZNF558-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF558-201/ChipExo_models_ZNF558_profile-pos.pattern_8.n_29-vs-ZNF558-201.alignment profile-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF558-201/ChipExo_models_ZNF558_profile-pos.pattern_9.n_27-vs-ZNF558-201.alignment profile-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF558-201/neg_patterns.ENCSR154YWK_ChIP_ZNF558_HepG2_ENCSR566GRR_profile_pattern_0.n_23-vs-ZNF558-201.alignment profile-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF558-201/neg_patterns.ENCSR447ZTA_ChIP_ZNF558_HEK293_ENCSR660APU_profile_pattern_0.n_268-vs-ZNF558-201.alignment profile-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF558-201/neg_patterns.ENCSR447ZTA_ChIP_ZNF558_HEK293_ENCSR660APU_profile_pattern_10.n_60-vs-ZNF558-201.alignment profile-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF558-201/neg_patterns.ENCSR447ZTA_ChIP_ZNF558_HEK293_ENCSR660APU_profile_pattern_11.n_53-vs-ZNF558-201.alignment profile-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF558-201/neg_patterns.ENCSR447ZTA_ChIP_ZNF558_HEK293_ENCSR660APU_profile_pattern_12.n_47-vs-ZNF558-201.alignment profile-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF558-201/neg_patterns.ENCSR447ZTA_ChIP_ZNF558_HEK293_ENCSR660APU_profile_pattern_13.n_22-vs-ZNF558-201.alignment profile-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF558-201/neg_patterns.ENCSR447ZTA_ChIP_ZNF558_HEK293_ENCSR660APU_profile_pattern_14.n_21-vs-ZNF558-201.alignment profile-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF558-201/neg_patterns.ENCSR447ZTA_ChIP_ZNF558_HEK293_ENCSR660APU_profile_pattern_1.n_195-vs-ZNF558-201.alignment profile-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF558-201/neg_patterns.ENCSR447ZTA_ChIP_ZNF558_HEK293_ENCSR660APU_profile_pattern_2.n_131-vs-ZNF558-201.alignment profile-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF558-201/neg_patterns.ENCSR447ZTA_ChIP_ZNF558_HEK293_ENCSR660APU_profile_pattern_3.n_129-vs-ZNF558-201.alignment profile-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF558-201/neg_patterns.ENCSR447ZTA_ChIP_ZNF558_HEK293_ENCSR660APU_profile_pattern_4.n_119-vs-ZNF558-201.alignment profile-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF558-201/neg_patterns.ENCSR447ZTA_ChIP_ZNF558_HEK293_ENCSR660APU_profile_pattern_5.n_85-vs-ZNF558-201.alignment profile-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF558-201/neg_patterns.ENCSR447ZTA_ChIP_ZNF558_HEK293_ENCSR660APU_profile_pattern_6.n_73-vs-ZNF558-201.alignment profile-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF558-201/neg_patterns.ENCSR447ZTA_ChIP_ZNF558_HEK293_ENCSR660APU_profile_pattern_7.n_70-vs-ZNF558-201.alignment profile-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF558-201/neg_patterns.ENCSR447ZTA_ChIP_ZNF558_HEK293_ENCSR660APU_profile_pattern_8.n_66-vs-ZNF558-201.alignment profile-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF558-201/neg_patterns.ENCSR447ZTA_ChIP_ZNF558_HEK293_ENCSR660APU_profile_pattern_9.n_63-vs-ZNF558-201.alignment profile-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF558-201/pos_patterns.ENCSR154YWK_ChIP_ZNF558_HepG2_ENCSR566GRR_profile_pattern_0.n_1179-vs-ZNF558-201.alignment profile-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF558-201/pos_patterns.ENCSR154YWK_ChIP_ZNF558_HepG2_ENCSR566GRR_profile_pattern_10.n_162-vs-ZNF558-201.alignment profile-znf_b1h_alignment/ZNF558-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF558-201/pos_patterns.ENCSR154YWK_ChIP_ZNF558_HepG2_ENCSR566GRR_profile_pattern_11.n_147-vs-ZNF558-201.alignment profile-znf_b1h_alignment/ZNF558-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF558-201/pos_patterns.ENCSR154YWK_ChIP_ZNF558_HepG2_ENCSR566GRR_profile_pattern_13.n_119-vs-ZNF558-201.alignment profile-znf_b1h_alignment/ZNF558-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF560-201/neg_patterns.ENCSR538RDA_ChIP_ZNF560_HEK293_ENCSR425DDX_profile_pattern_8.n_71-vs-ZNF560-201.alignment profile-znf_b1h_alignment/ZNF560-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF560-201/pos_patterns.ENCSR538RDA_ChIP_ZNF560_HEK293_ENCSR425DDX_profile_pattern_0.n_2783-vs-ZNF560-201.alignment profile-znf_b1h_alignment/ZNF560-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF560-201/pos_patterns.ENCSR538RDA_ChIP_ZNF560_HEK293_ENCSR425DDX_profile_pattern_1.n_329-vs-ZNF560-201.alignment profile-znf_b1h_alignment/ZNF560-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF560-201/pos_patterns.ENCSR538RDA_ChIP_ZNF560_HEK293_ENCSR425DDX_profile_pattern_2.n_149-vs-ZNF560-201.alignment profile-znf_b1h_alignment/ZNF560-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF561-201/ChipExo_models_ZNF561_profile-pos.pattern_0.n_331-vs-ZNF561-201.alignment profile-znf_b1h_alignment/ZNF561-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF561-201/neg_patterns.ENCSR125ULS_ChIP_ZNF561_HEK293_ENCSR626JLM_profile_pattern_2.n_49-vs-ZNF561-201.alignment profile-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF561-201/neg_patterns.ENCSR125ULS_ChIP_ZNF561_HEK293_ENCSR626JLM_profile_pattern_3.n_31-vs-ZNF561-201.alignment profile-znf_b1h_alignment/ZNF561-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR125ULS_ChIP_ZNF561_HEK293_ENCSR626JLM_profile_pattern_10.n_118-vs-ZNF561-201.alignment profile-znf_b1h_alignment/ZNF561-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR125ULS_ChIP_ZNF561_HEK293_ENCSR626JLM_profile_pattern_14.n_60-vs-ZNF561-201.alignment profile-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR125ULS_ChIP_ZNF561_HEK293_ENCSR626JLM_profile_pattern_15.n_44-vs-ZNF561-201.alignment profile-znf_b1h_alignment/ZNF561-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR125ULS_ChIP_ZNF561_HEK293_ENCSR626JLM_profile_pattern_17.n_23-vs-ZNF561-201.alignment profile-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR125ULS_ChIP_ZNF561_HEK293_ENCSR626JLM_profile_pattern_1.n_1725-vs-ZNF561-201.alignment profile-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR125ULS_ChIP_ZNF561_HEK293_ENCSR626JLM_profile_pattern_2.n_1357-vs-ZNF561-201.alignment profile-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR125ULS_ChIP_ZNF561_HEK293_ENCSR626JLM_profile_pattern_3.n_1241-vs-ZNF561-201.alignment profile-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR125ULS_ChIP_ZNF561_HEK293_ENCSR626JLM_profile_pattern_4.n_835-vs-ZNF561-201.alignment profile-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR125ULS_ChIP_ZNF561_HEK293_ENCSR626JLM_profile_pattern_5.n_737-vs-ZNF561-201.alignment profile-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR125ULS_ChIP_ZNF561_HEK293_ENCSR626JLM_profile_pattern_6.n_347-vs-ZNF561-201.alignment profile-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR125ULS_ChIP_ZNF561_HEK293_ENCSR626JLM_profile_pattern_7.n_304-vs-ZNF561-201.alignment profile-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR125ULS_ChIP_ZNF561_HEK293_ENCSR626JLM_profile_pattern_8.n_170-vs-ZNF561-201.alignment profile-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR125ULS_ChIP_ZNF561_HEK293_ENCSR626JLM_profile_pattern_9.n_122-vs-ZNF561-201.alignment profile-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR350GZC_ChIP_ZNF561_K562_ENCSR329MRV_profile_pattern_0.n_215-vs-ZNF561-201.alignment profile-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR350GZC_ChIP_ZNF561_K562_ENCSR329MRV_profile_pattern_10.n_86-vs-ZNF561-201.alignment profile-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR350GZC_ChIP_ZNF561_K562_ENCSR329MRV_profile_pattern_11.n_80-vs-ZNF561-201.alignment profile-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR350GZC_ChIP_ZNF561_K562_ENCSR329MRV_profile_pattern_12.n_72-vs-ZNF561-201.alignment profile-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR350GZC_ChIP_ZNF561_K562_ENCSR329MRV_profile_pattern_13.n_69-vs-ZNF561-201.alignment profile-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR350GZC_ChIP_ZNF561_K562_ENCSR329MRV_profile_pattern_14.n_65-vs-ZNF561-201.alignment profile-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR350GZC_ChIP_ZNF561_K562_ENCSR329MRV_profile_pattern_15.n_60-vs-ZNF561-201.alignment profile-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR350GZC_ChIP_ZNF561_K562_ENCSR329MRV_profile_pattern_16.n_45-vs-ZNF561-201.alignment profile-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR350GZC_ChIP_ZNF561_K562_ENCSR329MRV_profile_pattern_17.n_44-vs-ZNF561-201.alignment profile-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR350GZC_ChIP_ZNF561_K562_ENCSR329MRV_profile_pattern_18.n_44-vs-ZNF561-201.alignment profile-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR350GZC_ChIP_ZNF561_K562_ENCSR329MRV_profile_pattern_19.n_36-vs-ZNF561-201.alignment profile-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR350GZC_ChIP_ZNF561_K562_ENCSR329MRV_profile_pattern_1.n_168-vs-ZNF561-201.alignment profile-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR350GZC_ChIP_ZNF561_K562_ENCSR329MRV_profile_pattern_20.n_33-vs-ZNF561-201.alignment profile-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR350GZC_ChIP_ZNF561_K562_ENCSR329MRV_profile_pattern_21.n_30-vs-ZNF561-201.alignment profile-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR350GZC_ChIP_ZNF561_K562_ENCSR329MRV_profile_pattern_22.n_29-vs-ZNF561-201.alignment profile-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR350GZC_ChIP_ZNF561_K562_ENCSR329MRV_profile_pattern_23.n_26-vs-ZNF561-201.alignment profile-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR350GZC_ChIP_ZNF561_K562_ENCSR329MRV_profile_pattern_24.n_25-vs-ZNF561-201.alignment profile-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR350GZC_ChIP_ZNF561_K562_ENCSR329MRV_profile_pattern_2.n_117-vs-ZNF561-201.alignment profile-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR350GZC_ChIP_ZNF561_K562_ENCSR329MRV_profile_pattern_3.n_113-vs-ZNF561-201.alignment profile-znf_b1h_alignment/ZNF561-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR350GZC_ChIP_ZNF561_K562_ENCSR329MRV_profile_pattern_4.n_113-vs-ZNF561-201.alignment profile-znf_b1h_alignment/ZNF561-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF561-201/pos_patterns.ENCSR350GZC_ChIP_ZNF561_K562_ENCSR329MRV_profile_pattern_6.n_110-vs-ZNF561-201.alignment profile-znf_b1h_alignment/ZNF561-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-201/Hughes_GR_models_ZNF563_profile-pos.pattern_4.n_152-vs-ZNF563-201.alignment profile-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-201/Hughes_GR_models_ZNF563_profile-pos.pattern_5.n_108-vs-ZNF563-201.alignment profile-znf_b1h_alignment/ZNF563-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-201/Hughes_GR_models_ZNF563_profile-pos.pattern_8.n_25-vs-ZNF563-201.alignment profile-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-201/Hughes_GR_models_ZNF563_profile-pos.pattern_9.n_20-vs-ZNF563-201.alignment profile-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-201/neg_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_0.n_131-vs-ZNF563-201.alignment profile-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-201/neg_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_1.n_109-vs-ZNF563-201.alignment profile-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-201/neg_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_2.n_64-vs-ZNF563-201.alignment profile-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-201/neg_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_3.n_51-vs-ZNF563-201.alignment profile-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-201/neg_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_4.n_42-vs-ZNF563-201.alignment profile-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-201/neg_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_5.n_38-vs-ZNF563-201.alignment profile-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-201/neg_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_6.n_29-vs-ZNF563-201.alignment profile-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-201/neg_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_7.n_29-vs-ZNF563-201.alignment profile-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-201/neg_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_8.n_25-vs-ZNF563-201.alignment profile-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-201/neg_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_9.n_21-vs-ZNF563-201.alignment profile-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-201/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_0.n_1871-vs-ZNF563-201.alignment profile-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-201/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_10.n_347-vs-ZNF563-201.alignment profile-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-201/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_11.n_329-vs-ZNF563-201.alignment profile-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-201/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_12.n_154-vs-ZNF563-201.alignment profile-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-201/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_13.n_102-vs-ZNF563-201.alignment profile-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-201/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_14.n_89-vs-ZNF563-201.alignment profile-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-201/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_15.n_78-vs-ZNF563-201.alignment profile-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-201/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_16.n_56-vs-ZNF563-201.alignment profile-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-201/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_17.n_30-vs-ZNF563-201.alignment profile-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-201/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_1.n_1681-vs-ZNF563-201.alignment profile-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-201/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_2.n_1536-vs-ZNF563-201.alignment profile-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-201/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_3.n_1348-vs-ZNF563-201.alignment profile-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-201/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_4.n_719-vs-ZNF563-201.alignment profile-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-201/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_5.n_697-vs-ZNF563-201.alignment profile-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-201/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_6.n_444-vs-ZNF563-201.alignment profile-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-201/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_7.n_372-vs-ZNF563-201.alignment profile-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-201/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_8.n_367-vs-ZNF563-201.alignment profile-znf_b1h_alignment/ZNF563-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-201/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_9.n_359-vs-ZNF563-201.alignment profile-znf_b1h_alignment/ZNF563-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-203/Hughes_GR_models_ZNF563_profile-pos.pattern_1.n_714-vs-ZNF563-203.alignment profile-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-203/Hughes_GR_models_ZNF563_profile-pos.pattern_2.n_416-vs-ZNF563-203.alignment profile-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-203/Hughes_GR_models_ZNF563_profile-pos.pattern_3.n_221-vs-ZNF563-203.alignment profile-znf_b1h_alignment/ZNF563-203/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-203/Hughes_GR_models_ZNF563_profile-pos.pattern_5.n_108-vs-ZNF563-203.alignment profile-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-203/Hughes_GR_models_ZNF563_profile-pos.pattern_6.n_88-vs-ZNF563-203.alignment profile-znf_b1h_alignment/ZNF563-203/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-203/Hughes_GR_models_ZNF563_profile-pos.pattern_8.n_25-vs-ZNF563-203.alignment profile-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-203/Hughes_GR_models_ZNF563_profile-pos.pattern_9.n_20-vs-ZNF563-203.alignment profile-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-203/neg_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_0.n_131-vs-ZNF563-203.alignment profile-znf_b1h_alignment/ZNF563-203/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-203/neg_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_2.n_64-vs-ZNF563-203.alignment profile-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-203/neg_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_3.n_51-vs-ZNF563-203.alignment profile-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-203/neg_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_4.n_42-vs-ZNF563-203.alignment profile-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-203/neg_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_5.n_38-vs-ZNF563-203.alignment profile-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-203/neg_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_6.n_29-vs-ZNF563-203.alignment profile-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-203/neg_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_7.n_29-vs-ZNF563-203.alignment profile-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-203/neg_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_8.n_25-vs-ZNF563-203.alignment profile-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-203/neg_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_9.n_21-vs-ZNF563-203.alignment profile-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-203/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_0.n_1871-vs-ZNF563-203.alignment profile-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-203/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_10.n_347-vs-ZNF563-203.alignment profile-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-203/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_11.n_329-vs-ZNF563-203.alignment profile-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-203/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_12.n_154-vs-ZNF563-203.alignment profile-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-203/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_13.n_102-vs-ZNF563-203.alignment profile-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-203/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_14.n_89-vs-ZNF563-203.alignment profile-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-203/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_15.n_78-vs-ZNF563-203.alignment profile-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-203/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_16.n_56-vs-ZNF563-203.alignment profile-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-203/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_17.n_30-vs-ZNF563-203.alignment profile-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-203/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_1.n_1681-vs-ZNF563-203.alignment profile-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-203/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_2.n_1536-vs-ZNF563-203.alignment profile-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-203/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_3.n_1348-vs-ZNF563-203.alignment profile-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-203/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_4.n_719-vs-ZNF563-203.alignment profile-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-203/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_5.n_697-vs-ZNF563-203.alignment profile-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-203/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_6.n_444-vs-ZNF563-203.alignment profile-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-203/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_7.n_372-vs-ZNF563-203.alignment profile-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-203/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_8.n_367-vs-ZNF563-203.alignment profile-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF563-203/pos_patterns.ENCSR977FRK_ChIP_ZNF563_HepG2_ENCSR799BHM_profile_pattern_9.n_359-vs-ZNF563-203.alignment profile-znf_b1h_alignment/ZNF563-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/ChipExo_models_ZNF564_profile-pos.pattern_0.n_471-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/ChipExo_models_ZNF564_profile-pos.pattern_1.n_23-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/neg_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_0.n_476-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/neg_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_10.n_82-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/neg_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_11.n_80-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/neg_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_12.n_76-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/neg_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_13.n_69-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/neg_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_14.n_68-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/neg_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_15.n_67-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/neg_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_16.n_53-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/neg_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_17.n_52-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/neg_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_18.n_52-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/neg_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_19.n_49-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/neg_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_1.n_435-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/neg_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_20.n_48-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/neg_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_21.n_41-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/neg_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_22.n_40-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/neg_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_23.n_27-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/neg_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_24.n_25-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/neg_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_25.n_23-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/neg_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_26.n_23-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/neg_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_27.n_21-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/neg_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_2.n_199-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/neg_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_3.n_193-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/neg_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_4.n_191-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/neg_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_5.n_136-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/neg_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_6.n_119-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/neg_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_7.n_113-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/neg_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_8.n_104-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/neg_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_9.n_103-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/pos_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_0.n_1829-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/pos_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_10.n_225-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/pos_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_11.n_217-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/pos_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_12.n_208-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/pos_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_13.n_181-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/pos_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_14.n_149-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/pos_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_15.n_142-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/pos_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_16.n_132-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/pos_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_17.n_131-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/pos_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_18.n_59-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/pos_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_19.n_57-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/pos_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_1.n_1787-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/pos_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_20.n_38-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/pos_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_21.n_37-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/pos_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_22.n_36-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/pos_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_23.n_28-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/pos_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_24.n_26-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/pos_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_25.n_21-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/pos_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_26.n_20-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/pos_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_2.n_673-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/pos_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_3.n_341-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/pos_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_4.n_323-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/pos_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_5.n_297-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/pos_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_6.n_278-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/pos_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_7.n_275-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/pos_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_8.n_246-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF564-201/pos_patterns.ENCSR397EOT_ChIP_ZNF564_HepG2_ENCSR846MFZ_profile_pattern_9.n_242-vs-ZNF564-201.alignment profile-znf_b1h_alignment/ZNF564-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF565-201/ChipExo_models_ZNF565_profile-pos.pattern_0.n_804-vs-ZNF565-201.alignment profile-znf_b1h_alignment/ZNF565-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF565-201/ChipExo_models_ZNF565_profile-pos.pattern_1.n_47-vs-ZNF565-201.alignment profile-znf_b1h_alignment/ZNF565-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF565-201/ChipExo_models_ZNF565_profile-pos.pattern_2.n_41-vs-ZNF565-201.alignment profile-znf_b1h_alignment/ZNF565-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF565-201/ChipExo_models_ZNF565_profile-pos.pattern_3.n_39-vs-ZNF565-201.alignment profile-znf_b1h_alignment/ZNF565-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF565-201/ChipExo_models_ZNF565_profile-pos.pattern_4.n_29-vs-ZNF565-201.alignment profile-znf_b1h_alignment/ZNF565-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF565-201/ChipExo_models_ZNF565_profile-pos.pattern_5.n_20-vs-ZNF565-201.alignment profile-znf_b1h_alignment/ZNF565-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF565-201/pos_patterns.ENCSR754ALX_ChIP_ZNF565_SK-N-SH_ENCSR545WAG_profile_pattern_0.n_437-vs-ZNF565-201.alignment profile-znf_b1h_alignment/ZNF565-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF565-201/pos_patterns.ENCSR754ALX_ChIP_ZNF565_SK-N-SH_ENCSR545WAG_profile_pattern_10.n_26-vs-ZNF565-201.alignment profile-znf_b1h_alignment/ZNF565-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF565-201/pos_patterns.ENCSR754ALX_ChIP_ZNF565_SK-N-SH_ENCSR545WAG_profile_pattern_11.n_21-vs-ZNF565-201.alignment profile-znf_b1h_alignment/ZNF565-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF565-201/pos_patterns.ENCSR754ALX_ChIP_ZNF565_SK-N-SH_ENCSR545WAG_profile_pattern_12.n_20-vs-ZNF565-201.alignment profile-znf_b1h_alignment/ZNF565-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF565-201/pos_patterns.ENCSR754ALX_ChIP_ZNF565_SK-N-SH_ENCSR545WAG_profile_pattern_1.n_213-vs-ZNF565-201.alignment profile-znf_b1h_alignment/ZNF565-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF565-201/pos_patterns.ENCSR754ALX_ChIP_ZNF565_SK-N-SH_ENCSR545WAG_profile_pattern_2.n_188-vs-ZNF565-201.alignment profile-znf_b1h_alignment/ZNF565-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF565-201/pos_patterns.ENCSR754ALX_ChIP_ZNF565_SK-N-SH_ENCSR545WAG_profile_pattern_3.n_171-vs-ZNF565-201.alignment profile-znf_b1h_alignment/ZNF565-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF565-201/pos_patterns.ENCSR754ALX_ChIP_ZNF565_SK-N-SH_ENCSR545WAG_profile_pattern_4.n_170-vs-ZNF565-201.alignment profile-znf_b1h_alignment/ZNF565-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF565-201/pos_patterns.ENCSR754ALX_ChIP_ZNF565_SK-N-SH_ENCSR545WAG_profile_pattern_5.n_117-vs-ZNF565-201.alignment profile-znf_b1h_alignment/ZNF565-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF565-201/pos_patterns.ENCSR754ALX_ChIP_ZNF565_SK-N-SH_ENCSR545WAG_profile_pattern_6.n_79-vs-ZNF565-201.alignment profile-znf_b1h_alignment/ZNF565-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF565-201/pos_patterns.ENCSR754ALX_ChIP_ZNF565_SK-N-SH_ENCSR545WAG_profile_pattern_7.n_77-vs-ZNF565-201.alignment profile-znf_b1h_alignment/ZNF565-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF565-201/pos_patterns.ENCSR754ALX_ChIP_ZNF565_SK-N-SH_ENCSR545WAG_profile_pattern_8.n_69-vs-ZNF565-201.alignment profile-znf_b1h_alignment/ZNF565-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF565-201/pos_patterns.ENCSR754ALX_ChIP_ZNF565_SK-N-SH_ENCSR545WAG_profile_pattern_9.n_49-vs-ZNF565-201.alignment profile-znf_b1h_alignment/ZNF565-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF566-201/ChipExo_models_ZNF566_profile-pos.pattern_0.n_455-vs-ZNF566-201.alignment profile-znf_b1h_alignment/ZNF566-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF566-201/ChipExo_models_ZNF566_profile-pos.pattern_1.n_52-vs-ZNF566-201.alignment profile-znf_b1h_alignment/ZNF566-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF566-201/ChipExo_models_ZNF566_profile-pos.pattern_2.n_50-vs-ZNF566-201.alignment profile-znf_b1h_alignment/ZNF566-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF566-201/ChipExo_models_ZNF566_profile-pos.pattern_3.n_43-vs-ZNF566-201.alignment profile-znf_b1h_alignment/ZNF566-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF566-201/ChipExo_models_ZNF566_profile-pos.pattern_4.n_41-vs-ZNF566-201.alignment profile-znf_b1h_alignment/ZNF566-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF566-201/ChipExo_models_ZNF566_profile-pos.pattern_5.n_32-vs-ZNF566-201.alignment profile-znf_b1h_alignment/ZNF566-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF567-201/ChipExo_models_ZNF567_profile-pos.pattern_0.n_954-vs-ZNF567-201.alignment profile-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF567-201/ChipExo_models_ZNF567_profile-pos.pattern_1.n_72-vs-ZNF567-201.alignment profile-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF567-201/ChipExo_models_ZNF567_profile-pos.pattern_2.n_67-vs-ZNF567-201.alignment profile-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF567-201/neg_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_profile_pattern_0.n_54-vs-ZNF567-201.alignment profile-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF567-201/neg_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_profile_pattern_1.n_48-vs-ZNF567-201.alignment profile-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF567-201/neg_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_profile_pattern_2.n_39-vs-ZNF567-201.alignment profile-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF567-201/neg_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_profile_pattern_3.n_24-vs-ZNF567-201.alignment profile-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF567-201/neg_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_profile_pattern_4.n_20-vs-ZNF567-201.alignment profile-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_profile_pattern_0.n_829-vs-ZNF567-201.alignment profile-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_profile_pattern_10.n_262-vs-ZNF567-201.alignment profile-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_profile_pattern_11.n_253-vs-ZNF567-201.alignment profile-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_profile_pattern_12.n_244-vs-ZNF567-201.alignment profile-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_profile_pattern_13.n_226-vs-ZNF567-201.alignment profile-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_profile_pattern_14.n_198-vs-ZNF567-201.alignment profile-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_profile_pattern_15.n_174-vs-ZNF567-201.alignment profile-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_profile_pattern_16.n_167-vs-ZNF567-201.alignment profile-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_profile_pattern_17.n_157-vs-ZNF567-201.alignment profile-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_profile_pattern_18.n_145-vs-ZNF567-201.alignment profile-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_profile_pattern_19.n_142-vs-ZNF567-201.alignment profile-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_profile_pattern_1.n_543-vs-ZNF567-201.alignment profile-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_profile_pattern_20.n_137-vs-ZNF567-201.alignment profile-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_profile_pattern_21.n_134-vs-ZNF567-201.alignment profile-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_profile_pattern_22.n_105-vs-ZNF567-201.alignment profile-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_profile_pattern_23.n_83-vs-ZNF567-201.alignment profile-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_profile_pattern_24.n_79-vs-ZNF567-201.alignment profile-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_profile_pattern_25.n_56-vs-ZNF567-201.alignment profile-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_profile_pattern_26.n_36-vs-ZNF567-201.alignment profile-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_profile_pattern_27.n_29-vs-ZNF567-201.alignment profile-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_profile_pattern_2.n_513-vs-ZNF567-201.alignment profile-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_profile_pattern_3.n_427-vs-ZNF567-201.alignment profile-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_profile_pattern_4.n_425-vs-ZNF567-201.alignment profile-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_profile_pattern_5.n_422-vs-ZNF567-201.alignment profile-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_profile_pattern_6.n_386-vs-ZNF567-201.alignment profile-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_profile_pattern_7.n_351-vs-ZNF567-201.alignment profile-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_profile_pattern_8.n_324-vs-ZNF567-201.alignment profile-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF567-201/pos_patterns.ENCSR231NMZ_ChIP_ZNF567_HepG2_ENCSR075GZS_profile_pattern_9.n_271-vs-ZNF567-201.alignment profile-znf_b1h_alignment/ZNF567-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF569-201/pos_patterns.ENCSR225SLE_ChIP_ZNF569_HepG2_ENCSR886VKM_profile_pattern_0.n_271-vs-ZNF569-201.alignment profile-znf_b1h_alignment/ZNF569-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF569-201/pos_patterns.ENCSR225SLE_ChIP_ZNF569_HepG2_ENCSR886VKM_profile_pattern_10.n_55-vs-ZNF569-201.alignment profile-znf_b1h_alignment/ZNF569-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF569-201/pos_patterns.ENCSR225SLE_ChIP_ZNF569_HepG2_ENCSR886VKM_profile_pattern_11.n_54-vs-ZNF569-201.alignment profile-znf_b1h_alignment/ZNF569-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF569-201/pos_patterns.ENCSR225SLE_ChIP_ZNF569_HepG2_ENCSR886VKM_profile_pattern_12.n_45-vs-ZNF569-201.alignment profile-znf_b1h_alignment/ZNF569-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF569-201/pos_patterns.ENCSR225SLE_ChIP_ZNF569_HepG2_ENCSR886VKM_profile_pattern_13.n_43-vs-ZNF569-201.alignment profile-znf_b1h_alignment/ZNF569-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF569-201/pos_patterns.ENCSR225SLE_ChIP_ZNF569_HepG2_ENCSR886VKM_profile_pattern_14.n_41-vs-ZNF569-201.alignment profile-znf_b1h_alignment/ZNF569-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF569-201/pos_patterns.ENCSR225SLE_ChIP_ZNF569_HepG2_ENCSR886VKM_profile_pattern_15.n_41-vs-ZNF569-201.alignment profile-znf_b1h_alignment/ZNF569-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF569-201/pos_patterns.ENCSR225SLE_ChIP_ZNF569_HepG2_ENCSR886VKM_profile_pattern_16.n_30-vs-ZNF569-201.alignment profile-znf_b1h_alignment/ZNF569-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF569-201/pos_patterns.ENCSR225SLE_ChIP_ZNF569_HepG2_ENCSR886VKM_profile_pattern_17.n_27-vs-ZNF569-201.alignment profile-znf_b1h_alignment/ZNF569-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF57-201/neg_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_profile_pattern_0.n_222-vs-ZNF57-201.alignment profile-znf_b1h_alignment/ZNF57-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF57-201/neg_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_profile_pattern_1.n_94-vs-ZNF57-201.alignment profile-znf_b1h_alignment/ZNF57-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF57-201/neg_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_profile_pattern_2.n_89-vs-ZNF57-201.alignment profile-znf_b1h_alignment/ZNF57-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF57-201/neg_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_profile_pattern_3.n_65-vs-ZNF57-201.alignment profile-znf_b1h_alignment/ZNF57-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF57-201/neg_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_profile_pattern_4.n_51-vs-ZNF57-201.alignment profile-znf_b1h_alignment/ZNF57-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF57-201/neg_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_profile_pattern_5.n_30-vs-ZNF57-201.alignment profile-znf_b1h_alignment/ZNF57-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF57-201/pos_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_profile_pattern_0.n_168-vs-ZNF57-201.alignment profile-znf_b1h_alignment/ZNF57-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF57-201/pos_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_profile_pattern_10.n_54-vs-ZNF57-201.alignment profile-znf_b1h_alignment/ZNF57-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF57-201/pos_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_profile_pattern_11.n_47-vs-ZNF57-201.alignment profile-znf_b1h_alignment/ZNF57-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF57-201/pos_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_profile_pattern_12.n_40-vs-ZNF57-201.alignment profile-znf_b1h_alignment/ZNF57-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF57-201/pos_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_profile_pattern_13.n_39-vs-ZNF57-201.alignment profile-znf_b1h_alignment/ZNF57-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF57-201/pos_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_profile_pattern_14.n_35-vs-ZNF57-201.alignment profile-znf_b1h_alignment/ZNF57-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF57-201/pos_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_profile_pattern_15.n_24-vs-ZNF57-201.alignment profile-znf_b1h_alignment/ZNF57-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF57-201/pos_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_profile_pattern_16.n_24-vs-ZNF57-201.alignment profile-znf_b1h_alignment/ZNF57-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF57-201/pos_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_profile_pattern_17.n_22-vs-ZNF57-201.alignment profile-znf_b1h_alignment/ZNF57-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF57-201/pos_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_profile_pattern_18.n_22-vs-ZNF57-201.alignment profile-znf_b1h_alignment/ZNF57-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF57-201/pos_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_profile_pattern_19.n_21-vs-ZNF57-201.alignment profile-znf_b1h_alignment/ZNF57-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF57-201/pos_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_profile_pattern_1.n_159-vs-ZNF57-201.alignment profile-znf_b1h_alignment/ZNF57-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF57-201/pos_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_profile_pattern_20.n_20-vs-ZNF57-201.alignment profile-znf_b1h_alignment/ZNF57-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF57-201/pos_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_profile_pattern_2.n_155-vs-ZNF57-201.alignment profile-znf_b1h_alignment/ZNF57-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF57-201/pos_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_profile_pattern_3.n_135-vs-ZNF57-201.alignment profile-znf_b1h_alignment/ZNF57-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF57-201/pos_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_profile_pattern_5.n_93-vs-ZNF57-201.alignment profile-znf_b1h_alignment/ZNF57-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF57-201/pos_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_profile_pattern_7.n_67-vs-ZNF57-201.alignment profile-znf_b1h_alignment/ZNF57-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF57-201/pos_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_profile_pattern_8.n_64-vs-ZNF57-201.alignment profile-znf_b1h_alignment/ZNF57-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF57-205/pos_patterns.ENCSR918EFA_ChIP_ZNF57_K562_ENCSR613JZT_profile_pattern_9.n_58-vs-ZNF57-205.alignment profile-znf_b1h_alignment/ZNF57-205/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF572-201/neg_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_profile_pattern_2.n_69-vs-ZNF572-201.alignment profile-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF572-201/neg_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_profile_pattern_3.n_68-vs-ZNF572-201.alignment profile-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF572-201/neg_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_profile_pattern_4.n_23-vs-ZNF572-201.alignment profile-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF572-201/neg_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_profile_pattern_5.n_22-vs-ZNF572-201.alignment profile-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF572-201/pos_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_profile_pattern_0.n_1866-vs-ZNF572-201.alignment profile-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF572-201/pos_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_profile_pattern_10.n_25-vs-ZNF572-201.alignment profile-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF572-201/pos_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_profile_pattern_1.n_1715-vs-ZNF572-201.alignment profile-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF572-201/pos_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_profile_pattern_2.n_884-vs-ZNF572-201.alignment profile-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF572-201/pos_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_profile_pattern_3.n_307-vs-ZNF572-201.alignment profile-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF572-201/pos_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_profile_pattern_4.n_294-vs-ZNF572-201.alignment profile-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF572-201/pos_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_profile_pattern_5.n_210-vs-ZNF572-201.alignment profile-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF572-201/pos_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_profile_pattern_6.n_194-vs-ZNF572-201.alignment profile-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF572-201/pos_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_profile_pattern_7.n_162-vs-ZNF572-201.alignment profile-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF572-201/pos_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_profile_pattern_8.n_155-vs-ZNF572-201.alignment profile-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF572-201/pos_patterns.ENCSR663CTC_ChIP_ZNF572_HepG2_ENCSR326LVP_profile_pattern_9.n_99-vs-ZNF572-201.alignment profile-znf_b1h_alignment/ZNF572-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF573-201/ChipExo_models_ZNF573_profile-pos.pattern_0.n_1358-vs-ZNF573-201.alignment profile-znf_b1h_alignment/ZNF573-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF573-201/ChipExo_models_ZNF573_profile-pos.pattern_2.n_30-vs-ZNF573-201.alignment profile-znf_b1h_alignment/ZNF573-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF573-201/ChipExo_models_ZNF573_profile-pos.pattern_3.n_27-vs-ZNF573-201.alignment profile-znf_b1h_alignment/ZNF573-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/Hughes_GR_models_ZNF574_profile-pos.pattern_0.n_862-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/Hughes_GR_models_ZNF574_profile-pos.pattern_1.n_837-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/Hughes_GR_models_ZNF574_profile-pos.pattern_3.n_352-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/Hughes_GR_models_ZNF574_profile-pos.pattern_4.n_271-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/Hughes_GR_models_ZNF574_profile-pos.pattern_5.n_33-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/Hughes_GR_models_ZNF574_profile-pos.pattern_6.n_32-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/Hughes_NB_models_ZNF574_profile-pos.pattern_0.n_715-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/Hughes_NB_models_ZNF574_profile-pos.pattern_1.n_619-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/Hughes_NB_models_ZNF574_profile-pos.pattern_2.n_325-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/Hughes_NB_models_ZNF574_profile-pos.pattern_3.n_283-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/Hughes_NB_models_ZNF574_profile-pos.pattern_4.n_195-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/Hughes_NB_models_ZNF574_profile-pos.pattern_5.n_172-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/Hughes_NB_models_ZNF574_profile-pos.pattern_6.n_43-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/Hughes_NB_models_ZNF574_profile-pos.pattern_7.n_20-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/neg_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_profile_pattern_0.n_133-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/neg_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_profile_pattern_10.n_24-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/neg_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_profile_pattern_11.n_23-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/neg_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_profile_pattern_12.n_22-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/neg_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_profile_pattern_13.n_22-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/neg_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_profile_pattern_14.n_20-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/neg_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_profile_pattern_15.n_20-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/neg_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_profile_pattern_16.n_20-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/neg_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_profile_pattern_17.n_20-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/neg_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_profile_pattern_1.n_58-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/neg_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_profile_pattern_2.n_34-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/neg_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_profile_pattern_3.n_33-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/neg_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_profile_pattern_4.n_32-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/neg_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_profile_pattern_5.n_32-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/neg_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_profile_pattern_6.n_28-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/neg_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_profile_pattern_7.n_26-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/neg_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_profile_pattern_8.n_26-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/neg_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_profile_pattern_9.n_24-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR402JAC_ChIP_ZNF574_MCF-7_ENCSR631TCZ_profile_pattern_0.n_540-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR402JAC_ChIP_ZNF574_MCF-7_ENCSR631TCZ_profile_pattern_10.n_84-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR402JAC_ChIP_ZNF574_MCF-7_ENCSR631TCZ_profile_pattern_11.n_84-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR402JAC_ChIP_ZNF574_MCF-7_ENCSR631TCZ_profile_pattern_12.n_78-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR402JAC_ChIP_ZNF574_MCF-7_ENCSR631TCZ_profile_pattern_13.n_72-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR402JAC_ChIP_ZNF574_MCF-7_ENCSR631TCZ_profile_pattern_14.n_63-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR402JAC_ChIP_ZNF574_MCF-7_ENCSR631TCZ_profile_pattern_15.n_57-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR402JAC_ChIP_ZNF574_MCF-7_ENCSR631TCZ_profile_pattern_16.n_56-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR402JAC_ChIP_ZNF574_MCF-7_ENCSR631TCZ_profile_pattern_17.n_53-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR402JAC_ChIP_ZNF574_MCF-7_ENCSR631TCZ_profile_pattern_18.n_53-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR402JAC_ChIP_ZNF574_MCF-7_ENCSR631TCZ_profile_pattern_19.n_50-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR402JAC_ChIP_ZNF574_MCF-7_ENCSR631TCZ_profile_pattern_1.n_304-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR402JAC_ChIP_ZNF574_MCF-7_ENCSR631TCZ_profile_pattern_20.n_48-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR402JAC_ChIP_ZNF574_MCF-7_ENCSR631TCZ_profile_pattern_21.n_31-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR402JAC_ChIP_ZNF574_MCF-7_ENCSR631TCZ_profile_pattern_22.n_28-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR402JAC_ChIP_ZNF574_MCF-7_ENCSR631TCZ_profile_pattern_2.n_211-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR402JAC_ChIP_ZNF574_MCF-7_ENCSR631TCZ_profile_pattern_3.n_209-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR402JAC_ChIP_ZNF574_MCF-7_ENCSR631TCZ_profile_pattern_4.n_146-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR402JAC_ChIP_ZNF574_MCF-7_ENCSR631TCZ_profile_pattern_5.n_129-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR402JAC_ChIP_ZNF574_MCF-7_ENCSR631TCZ_profile_pattern_6.n_128-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR402JAC_ChIP_ZNF574_MCF-7_ENCSR631TCZ_profile_pattern_7.n_116-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR402JAC_ChIP_ZNF574_MCF-7_ENCSR631TCZ_profile_pattern_8.n_111-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR402JAC_ChIP_ZNF574_MCF-7_ENCSR631TCZ_profile_pattern_9.n_98-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_profile_pattern_0.n_5506-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_profile_pattern_10.n_60-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_profile_pattern_11.n_51-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_profile_pattern_12.n_49-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_profile_pattern_13.n_42-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_profile_pattern_14.n_39-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_profile_pattern_15.n_35-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_profile_pattern_16.n_27-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_profile_pattern_17.n_24-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_profile_pattern_18.n_20-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_profile_pattern_1.n_3548-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_profile_pattern_2.n_2791-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF574-201/pos_patterns.ENCSR886YJI_ChIP_ZNF574_HepG2_ENCSR078RTA_profile_pattern_3.n_2529-vs-ZNF574-201.alignment profile-znf_b1h_alignment/ZNF574-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF576-201/pos_patterns.ENCSR253HUM_ChIP_ZNF576_HepG2_ENCSR204JXG_profile_pattern_0.n_515-vs-ZNF576-201.alignment profile-znf_b1h_alignment/ZNF576-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF576-201/pos_patterns.ENCSR253HUM_ChIP_ZNF576_HepG2_ENCSR204JXG_profile_pattern_11.n_73-vs-ZNF576-201.alignment profile-znf_b1h_alignment/ZNF576-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF576-201/pos_patterns.ENCSR253HUM_ChIP_ZNF576_HepG2_ENCSR204JXG_profile_pattern_12.n_69-vs-ZNF576-201.alignment profile-znf_b1h_alignment/ZNF576-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF576-201/pos_patterns.ENCSR253HUM_ChIP_ZNF576_HepG2_ENCSR204JXG_profile_pattern_13.n_68-vs-ZNF576-201.alignment profile-znf_b1h_alignment/ZNF576-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF576-201/pos_patterns.ENCSR253HUM_ChIP_ZNF576_HepG2_ENCSR204JXG_profile_pattern_14.n_66-vs-ZNF576-201.alignment profile-znf_b1h_alignment/ZNF576-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF576-201/pos_patterns.ENCSR253HUM_ChIP_ZNF576_HepG2_ENCSR204JXG_profile_pattern_15.n_57-vs-ZNF576-201.alignment profile-znf_b1h_alignment/ZNF576-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF576-201/pos_patterns.ENCSR253HUM_ChIP_ZNF576_HepG2_ENCSR204JXG_profile_pattern_16.n_42-vs-ZNF576-201.alignment profile-znf_b1h_alignment/ZNF576-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF576-201/pos_patterns.ENCSR253HUM_ChIP_ZNF576_HepG2_ENCSR204JXG_profile_pattern_17.n_23-vs-ZNF576-201.alignment profile-znf_b1h_alignment/ZNF576-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF576-201/pos_patterns.ENCSR253HUM_ChIP_ZNF576_HepG2_ENCSR204JXG_profile_pattern_1.n_475-vs-ZNF576-201.alignment profile-znf_b1h_alignment/ZNF576-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF576-201/pos_patterns.ENCSR253HUM_ChIP_ZNF576_HepG2_ENCSR204JXG_profile_pattern_2.n_347-vs-ZNF576-201.alignment profile-znf_b1h_alignment/ZNF576-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF576-201/pos_patterns.ENCSR253HUM_ChIP_ZNF576_HepG2_ENCSR204JXG_profile_pattern_3.n_165-vs-ZNF576-201.alignment profile-znf_b1h_alignment/ZNF576-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF576-201/pos_patterns.ENCSR253HUM_ChIP_ZNF576_HepG2_ENCSR204JXG_profile_pattern_4.n_160-vs-ZNF576-201.alignment profile-znf_b1h_alignment/ZNF576-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF576-201/pos_patterns.ENCSR253HUM_ChIP_ZNF576_HepG2_ENCSR204JXG_profile_pattern_5.n_138-vs-ZNF576-201.alignment profile-znf_b1h_alignment/ZNF576-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF576-201/pos_patterns.ENCSR253HUM_ChIP_ZNF576_HepG2_ENCSR204JXG_profile_pattern_6.n_112-vs-ZNF576-201.alignment profile-znf_b1h_alignment/ZNF576-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF576-201/pos_patterns.ENCSR253HUM_ChIP_ZNF576_HepG2_ENCSR204JXG_profile_pattern_7.n_104-vs-ZNF576-201.alignment profile-znf_b1h_alignment/ZNF576-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF576-201/pos_patterns.ENCSR253HUM_ChIP_ZNF576_HepG2_ENCSR204JXG_profile_pattern_8.n_101-vs-ZNF576-201.alignment profile-znf_b1h_alignment/ZNF576-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF576-201/pos_patterns.ENCSR253HUM_ChIP_ZNF576_HepG2_ENCSR204JXG_profile_pattern_9.n_81-vs-ZNF576-201.alignment profile-znf_b1h_alignment/ZNF576-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF577-201/pos_patterns.ENCSR436RQS_ChIP_ZNF577_HepG2_ENCSR522KLB_profile_pattern_0.n_593-vs-ZNF577-201.alignment profile-znf_b1h_alignment/ZNF577-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF577-201/pos_patterns.ENCSR436RQS_ChIP_ZNF577_HepG2_ENCSR522KLB_profile_pattern_10.n_40-vs-ZNF577-201.alignment profile-znf_b1h_alignment/ZNF577-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF577-201/pos_patterns.ENCSR436RQS_ChIP_ZNF577_HepG2_ENCSR522KLB_profile_pattern_11.n_21-vs-ZNF577-201.alignment profile-znf_b1h_alignment/ZNF577-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF577-201/pos_patterns.ENCSR436RQS_ChIP_ZNF577_HepG2_ENCSR522KLB_profile_pattern_1.n_192-vs-ZNF577-201.alignment profile-znf_b1h_alignment/ZNF577-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF577-201/pos_patterns.ENCSR436RQS_ChIP_ZNF577_HepG2_ENCSR522KLB_profile_pattern_2.n_141-vs-ZNF577-201.alignment profile-znf_b1h_alignment/ZNF577-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF577-201/pos_patterns.ENCSR436RQS_ChIP_ZNF577_HepG2_ENCSR522KLB_profile_pattern_3.n_134-vs-ZNF577-201.alignment profile-znf_b1h_alignment/ZNF577-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF577-201/pos_patterns.ENCSR436RQS_ChIP_ZNF577_HepG2_ENCSR522KLB_profile_pattern_4.n_111-vs-ZNF577-201.alignment profile-znf_b1h_alignment/ZNF577-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF577-201/pos_patterns.ENCSR436RQS_ChIP_ZNF577_HepG2_ENCSR522KLB_profile_pattern_5.n_104-vs-ZNF577-201.alignment profile-znf_b1h_alignment/ZNF577-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF577-201/pos_patterns.ENCSR436RQS_ChIP_ZNF577_HepG2_ENCSR522KLB_profile_pattern_6.n_79-vs-ZNF577-201.alignment profile-znf_b1h_alignment/ZNF577-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF577-201/pos_patterns.ENCSR436RQS_ChIP_ZNF577_HepG2_ENCSR522KLB_profile_pattern_7.n_60-vs-ZNF577-201.alignment profile-znf_b1h_alignment/ZNF577-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF577-201/pos_patterns.ENCSR436RQS_ChIP_ZNF577_HepG2_ENCSR522KLB_profile_pattern_8.n_52-vs-ZNF577-201.alignment profile-znf_b1h_alignment/ZNF577-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF577-201/pos_patterns.ENCSR436RQS_ChIP_ZNF577_HepG2_ENCSR522KLB_profile_pattern_9.n_49-vs-ZNF577-201.alignment profile-znf_b1h_alignment/ZNF577-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF580-201/neg_patterns.ENCSR173CTF_ChIP_ZNF580_HepG2_ENCSR480SUL_profile_pattern_0.n_248-vs-ZNF580-201.alignment profile-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF580-201/neg_patterns.ENCSR173CTF_ChIP_ZNF580_HepG2_ENCSR480SUL_profile_pattern_1.n_209-vs-ZNF580-201.alignment profile-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF580-201/neg_patterns.ENCSR173CTF_ChIP_ZNF580_HepG2_ENCSR480SUL_profile_pattern_2.n_119-vs-ZNF580-201.alignment profile-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF580-201/neg_patterns.ENCSR173CTF_ChIP_ZNF580_HepG2_ENCSR480SUL_profile_pattern_3.n_44-vs-ZNF580-201.alignment profile-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF580-201/neg_patterns.ENCSR173CTF_ChIP_ZNF580_HepG2_ENCSR480SUL_profile_pattern_4.n_42-vs-ZNF580-201.alignment profile-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF580-201/neg_patterns.ENCSR173CTF_ChIP_ZNF580_HepG2_ENCSR480SUL_profile_pattern_5.n_21-vs-ZNF580-201.alignment profile-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF580-201/neg_patterns.ENCSR173CTF_ChIP_ZNF580_HepG2_ENCSR480SUL_profile_pattern_6.n_20-vs-ZNF580-201.alignment profile-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF580-201/neg_patterns.ENCSR668HOP_ChIP_ZNF580_HEK293_ENCSR959CUQ_profile_pattern_0.n_48-vs-ZNF580-201.alignment profile-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF580-201/neg_patterns.ENCSR668HOP_ChIP_ZNF580_HEK293_ENCSR959CUQ_profile_pattern_1.n_39-vs-ZNF580-201.alignment profile-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF580-201/neg_patterns.ENCSR668HOP_ChIP_ZNF580_HEK293_ENCSR959CUQ_profile_pattern_2.n_37-vs-ZNF580-201.alignment profile-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF580-201/neg_patterns.ENCSR668HOP_ChIP_ZNF580_HEK293_ENCSR959CUQ_profile_pattern_3.n_27-vs-ZNF580-201.alignment profile-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF580-201/neg_patterns.ENCSR668HOP_ChIP_ZNF580_HEK293_ENCSR959CUQ_profile_pattern_4.n_26-vs-ZNF580-201.alignment profile-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR173CTF_ChIP_ZNF580_HepG2_ENCSR480SUL_profile_pattern_0.n_4080-vs-ZNF580-201.alignment profile-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR173CTF_ChIP_ZNF580_HepG2_ENCSR480SUL_profile_pattern_10.n_406-vs-ZNF580-201.alignment profile-znf_b1h_alignment/ZNF580-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR668HOP_ChIP_ZNF580_HEK293_ENCSR959CUQ_profile_pattern_19.n_95-vs-ZNF580-201.alignment profile-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR668HOP_ChIP_ZNF580_HEK293_ENCSR959CUQ_profile_pattern_1.n_1899-vs-ZNF580-201.alignment profile-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR668HOP_ChIP_ZNF580_HEK293_ENCSR959CUQ_profile_pattern_20.n_70-vs-ZNF580-201.alignment profile-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR668HOP_ChIP_ZNF580_HEK293_ENCSR959CUQ_profile_pattern_21.n_60-vs-ZNF580-201.alignment profile-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR668HOP_ChIP_ZNF580_HEK293_ENCSR959CUQ_profile_pattern_22.n_55-vs-ZNF580-201.alignment profile-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR668HOP_ChIP_ZNF580_HEK293_ENCSR959CUQ_profile_pattern_23.n_53-vs-ZNF580-201.alignment profile-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR668HOP_ChIP_ZNF580_HEK293_ENCSR959CUQ_profile_pattern_24.n_49-vs-ZNF580-201.alignment profile-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR668HOP_ChIP_ZNF580_HEK293_ENCSR959CUQ_profile_pattern_25.n_32-vs-ZNF580-201.alignment profile-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR668HOP_ChIP_ZNF580_HEK293_ENCSR959CUQ_profile_pattern_26.n_32-vs-ZNF580-201.alignment profile-znf_b1h_alignment/ZNF580-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR668HOP_ChIP_ZNF580_HEK293_ENCSR959CUQ_profile_pattern_28.n_26-vs-ZNF580-201.alignment profile-znf_b1h_alignment/ZNF580-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR668HOP_ChIP_ZNF580_HEK293_ENCSR959CUQ_profile_pattern_2.n_1322-vs-ZNF580-201.alignment profile-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR668HOP_ChIP_ZNF580_HEK293_ENCSR959CUQ_profile_pattern_30.n_25-vs-ZNF580-201.alignment profile-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR668HOP_ChIP_ZNF580_HEK293_ENCSR959CUQ_profile_pattern_31.n_23-vs-ZNF580-201.alignment profile-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR668HOP_ChIP_ZNF580_HEK293_ENCSR959CUQ_profile_pattern_3.n_1193-vs-ZNF580-201.alignment profile-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR668HOP_ChIP_ZNF580_HEK293_ENCSR959CUQ_profile_pattern_4.n_828-vs-ZNF580-201.alignment profile-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR668HOP_ChIP_ZNF580_HEK293_ENCSR959CUQ_profile_pattern_5.n_823-vs-ZNF580-201.alignment profile-znf_b1h_alignment/ZNF580-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF580-201/pos_patterns.ENCSR668HOP_ChIP_ZNF580_HEK293_ENCSR959CUQ_profile_pattern_6.n_551-vs-ZNF580-201.alignment profile-znf_b1h_alignment/ZNF580-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF583-201/pos_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_profile_pattern_10.n_210-vs-ZNF583-201.alignment profile-znf_b1h_alignment/ZNF583-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF583-201/pos_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_profile_pattern_12.n_184-vs-ZNF583-201.alignment profile-znf_b1h_alignment/ZNF583-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF583-207/pos_patterns.ENCSR775EQV_ChIP_ZNF583_K562_ENCSR030AIJ_profile_pattern_9.n_222-vs-ZNF583-207.alignment profile-znf_b1h_alignment/ZNF583-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/ChipExo_models_ZNF584_profile-pos.pattern_0.n_211-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/ChipExo_models_ZNF584_profile-pos.pattern_2.n_45-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/neg_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_profile_pattern_0.n_437-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/neg_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_profile_pattern_13.n_67-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/neg_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_profile_pattern_15.n_54-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/neg_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_profile_pattern_16.n_50-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/neg_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_profile_pattern_17.n_45-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/neg_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_profile_pattern_18.n_43-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/neg_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_profile_pattern_19.n_42-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/neg_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_profile_pattern_1.n_270-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/neg_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_profile_pattern_20.n_41-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/neg_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_profile_pattern_21.n_39-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/neg_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_profile_pattern_22.n_29-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/neg_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_profile_pattern_23.n_22-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/neg_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_profile_pattern_24.n_21-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/neg_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_profile_pattern_2.n_154-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/neg_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_profile_pattern_3.n_130-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/neg_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_profile_pattern_4.n_120-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/neg_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_profile_pattern_5.n_95-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/neg_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_profile_pattern_6.n_91-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/neg_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_profile_pattern_7.n_80-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/neg_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_profile_pattern_8.n_77-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/neg_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_profile_pattern_9.n_70-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/pos_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_profile_pattern_0.n_3679-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/pos_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_profile_pattern_10.n_296-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/pos_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_profile_pattern_11.n_232-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/pos_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_profile_pattern_12.n_218-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/pos_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_profile_pattern_13.n_179-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/pos_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_profile_pattern_14.n_177-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/pos_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_profile_pattern_15.n_174-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/pos_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_profile_pattern_16.n_125-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/pos_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_profile_pattern_17.n_115-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/pos_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_profile_pattern_18.n_111-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/pos_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_profile_pattern_19.n_95-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/pos_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_profile_pattern_1.n_1859-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/pos_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_profile_pattern_20.n_77-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/pos_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_profile_pattern_21.n_68-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/pos_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_profile_pattern_22.n_25-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/pos_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_profile_pattern_2.n_1274-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/pos_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_profile_pattern_3.n_1253-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/pos_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_profile_pattern_4.n_930-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/pos_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_profile_pattern_5.n_739-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/pos_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_profile_pattern_6.n_561-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/pos_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_profile_pattern_7.n_520-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/pos_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_profile_pattern_8.n_338-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF584-201/pos_patterns.ENCSR149ZBI_ChIP_ZNF584_K562_ENCSR384YJU_profile_pattern_9.n_323-vs-ZNF584-201.alignment profile-znf_b1h_alignment/ZNF584-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF585A-201/ChipExo_models_ZNF585A_profile-pos.pattern_0.n_2569-vs-ZNF585A-201.alignment profile-znf_b1h_alignment/ZNF585A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF585A-201/ChipExo_models_ZNF585A_profile-pos.pattern_1.n_223-vs-ZNF585A-201.alignment profile-znf_b1h_alignment/ZNF585A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF585A-201/ChipExo_models_ZNF585A_profile-pos.pattern_2.n_73-vs-ZNF585A-201.alignment profile-znf_b1h_alignment/ZNF585A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF585A-201/ChipExo_models_ZNF585A_profile-pos.pattern_3.n_68-vs-ZNF585A-201.alignment profile-znf_b1h_alignment/ZNF585A-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF585B-205/pos_patterns.ENCSR011XCI_ChIP_ZNF585B_HEK293_ENCSR206HFO_profile_pattern_0.n_5308-vs-ZNF585B-205.alignment profile-znf_b1h_alignment/ZNF585B-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF585B-205/pos_patterns.ENCSR011XCI_ChIP_ZNF585B_HEK293_ENCSR206HFO_profile_pattern_1.n_1021-vs-ZNF585B-205.alignment profile-znf_b1h_alignment/ZNF585B-205/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF586-201/neg_patterns.ENCSR236JZN_ChIP_ZNF586_K562_ENCSR577XPU_profile_pattern_5.n_30-vs-ZNF586-201.alignment profile-znf_b1h_alignment/ZNF586-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF586-201/neg_patterns.ENCSR236JZN_ChIP_ZNF586_K562_ENCSR577XPU_profile_pattern_7.n_29-vs-ZNF586-201.alignment profile-znf_b1h_alignment/ZNF586-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF586-201/neg_patterns.ENCSR236JZN_ChIP_ZNF586_K562_ENCSR577XPU_profile_pattern_9.n_27-vs-ZNF586-201.alignment profile-znf_b1h_alignment/ZNF586-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF586-201/pos_patterns.ENCSR236JZN_ChIP_ZNF586_K562_ENCSR577XPU_profile_pattern_0.n_396-vs-ZNF586-201.alignment profile-znf_b1h_alignment/ZNF586-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF586-201/pos_patterns.ENCSR236JZN_ChIP_ZNF586_K562_ENCSR577XPU_profile_pattern_10.n_44-vs-ZNF586-201.alignment profile-znf_b1h_alignment/ZNF586-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF586-201/pos_patterns.ENCSR236JZN_ChIP_ZNF586_K562_ENCSR577XPU_profile_pattern_11.n_38-vs-ZNF586-201.alignment profile-znf_b1h_alignment/ZNF586-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF586-201/pos_patterns.ENCSR236JZN_ChIP_ZNF586_K562_ENCSR577XPU_profile_pattern_12.n_29-vs-ZNF586-201.alignment profile-znf_b1h_alignment/ZNF586-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF586-201/pos_patterns.ENCSR236JZN_ChIP_ZNF586_K562_ENCSR577XPU_profile_pattern_13.n_21-vs-ZNF586-201.alignment profile-znf_b1h_alignment/ZNF586-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF586-201/pos_patterns.ENCSR236JZN_ChIP_ZNF586_K562_ENCSR577XPU_profile_pattern_1.n_144-vs-ZNF586-201.alignment profile-znf_b1h_alignment/ZNF586-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF586-201/pos_patterns.ENCSR236JZN_ChIP_ZNF586_K562_ENCSR577XPU_profile_pattern_2.n_123-vs-ZNF586-201.alignment profile-znf_b1h_alignment/ZNF586-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF586-201/pos_patterns.ENCSR236JZN_ChIP_ZNF586_K562_ENCSR577XPU_profile_pattern_3.n_98-vs-ZNF586-201.alignment profile-znf_b1h_alignment/ZNF586-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF586-201/pos_patterns.ENCSR236JZN_ChIP_ZNF586_K562_ENCSR577XPU_profile_pattern_4.n_85-vs-ZNF586-201.alignment profile-znf_b1h_alignment/ZNF586-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF586-201/pos_patterns.ENCSR236JZN_ChIP_ZNF586_K562_ENCSR577XPU_profile_pattern_5.n_78-vs-ZNF586-201.alignment profile-znf_b1h_alignment/ZNF586-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF586-201/pos_patterns.ENCSR236JZN_ChIP_ZNF586_K562_ENCSR577XPU_profile_pattern_6.n_75-vs-ZNF586-201.alignment profile-znf_b1h_alignment/ZNF586-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF586-201/pos_patterns.ENCSR236JZN_ChIP_ZNF586_K562_ENCSR577XPU_profile_pattern_7.n_70-vs-ZNF586-201.alignment profile-znf_b1h_alignment/ZNF586-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF586-201/pos_patterns.ENCSR236JZN_ChIP_ZNF586_K562_ENCSR577XPU_profile_pattern_8.n_59-vs-ZNF586-201.alignment profile-znf_b1h_alignment/ZNF586-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF586-201/pos_patterns.ENCSR236JZN_ChIP_ZNF586_K562_ENCSR577XPU_profile_pattern_9.n_47-vs-ZNF586-201.alignment profile-znf_b1h_alignment/ZNF586-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF587-201/ChipExo_models_ZNF587_profile-pos.pattern_0.n_517-vs-ZNF587-201.alignment profile-znf_b1h_alignment/ZNF587-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF587-201/ChipExo_models_ZNF587_profile-pos.pattern_1.n_41-vs-ZNF587-201.alignment profile-znf_b1h_alignment/ZNF587-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF587-201/ChipExo_models_ZNF587_profile-pos.pattern_2.n_21-vs-ZNF587-201.alignment profile-znf_b1h_alignment/ZNF587-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF589-201/neg_patterns.ENCSR603XLW_ChIP_ZNF589_K562_ENCSR441ZYV_profile_pattern_0.n_271-vs-ZNF589-201.alignment profile-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF589-201/neg_patterns.ENCSR603XLW_ChIP_ZNF589_K562_ENCSR441ZYV_profile_pattern_1.n_80-vs-ZNF589-201.alignment profile-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF589-201/neg_patterns.ENCSR603XLW_ChIP_ZNF589_K562_ENCSR441ZYV_profile_pattern_2.n_67-vs-ZNF589-201.alignment profile-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF589-201/neg_patterns.ENCSR603XLW_ChIP_ZNF589_K562_ENCSR441ZYV_profile_pattern_3.n_39-vs-ZNF589-201.alignment profile-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF589-201/neg_patterns.ENCSR603XLW_ChIP_ZNF589_K562_ENCSR441ZYV_profile_pattern_4.n_35-vs-ZNF589-201.alignment profile-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF589-201/neg_patterns.ENCSR603XLW_ChIP_ZNF589_K562_ENCSR441ZYV_profile_pattern_5.n_34-vs-ZNF589-201.alignment profile-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF589-201/neg_patterns.ENCSR603XLW_ChIP_ZNF589_K562_ENCSR441ZYV_profile_pattern_6.n_25-vs-ZNF589-201.alignment profile-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF589-201/neg_patterns.ENCSR603XLW_ChIP_ZNF589_K562_ENCSR441ZYV_profile_pattern_7.n_22-vs-ZNF589-201.alignment profile-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF589-201/neg_patterns.ENCSR603XLW_ChIP_ZNF589_K562_ENCSR441ZYV_profile_pattern_8.n_20-vs-ZNF589-201.alignment profile-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF589-201/neg_patterns.ENCSR827ZGB_ChIP_ZNF589_HepG2_ENCSR857FTR_profile_pattern_0.n_59-vs-ZNF589-201.alignment profile-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF589-201/neg_patterns.ENCSR827ZGB_ChIP_ZNF589_HepG2_ENCSR857FTR_profile_pattern_1.n_45-vs-ZNF589-201.alignment profile-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF589-201/neg_patterns.ENCSR827ZGB_ChIP_ZNF589_HepG2_ENCSR857FTR_profile_pattern_2.n_44-vs-ZNF589-201.alignment profile-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF589-201/neg_patterns.ENCSR827ZGB_ChIP_ZNF589_HepG2_ENCSR857FTR_profile_pattern_3.n_32-vs-ZNF589-201.alignment profile-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF589-201/neg_patterns.ENCSR827ZGB_ChIP_ZNF589_HepG2_ENCSR857FTR_profile_pattern_4.n_27-vs-ZNF589-201.alignment profile-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR603XLW_ChIP_ZNF589_K562_ENCSR441ZYV_profile_pattern_0.n_5908-vs-ZNF589-201.alignment profile-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR603XLW_ChIP_ZNF589_K562_ENCSR441ZYV_profile_pattern_10.n_295-vs-ZNF589-201.alignment profile-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR603XLW_ChIP_ZNF589_K562_ENCSR441ZYV_profile_pattern_11.n_179-vs-ZNF589-201.alignment profile-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR603XLW_ChIP_ZNF589_K562_ENCSR441ZYV_profile_pattern_12.n_171-vs-ZNF589-201.alignment profile-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR603XLW_ChIP_ZNF589_K562_ENCSR441ZYV_profile_pattern_13.n_157-vs-ZNF589-201.alignment profile-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR603XLW_ChIP_ZNF589_K562_ENCSR441ZYV_profile_pattern_14.n_147-vs-ZNF589-201.alignment profile-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR603XLW_ChIP_ZNF589_K562_ENCSR441ZYV_profile_pattern_15.n_142-vs-ZNF589-201.alignment profile-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR603XLW_ChIP_ZNF589_K562_ENCSR441ZYV_profile_pattern_16.n_141-vs-ZNF589-201.alignment profile-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR603XLW_ChIP_ZNF589_K562_ENCSR441ZYV_profile_pattern_17.n_132-vs-ZNF589-201.alignment profile-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR603XLW_ChIP_ZNF589_K562_ENCSR441ZYV_profile_pattern_18.n_131-vs-ZNF589-201.alignment profile-znf_b1h_alignment/ZNF589-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR603XLW_ChIP_ZNF589_K562_ENCSR441ZYV_profile_pattern_1.n_2066-vs-ZNF589-201.alignment profile-znf_b1h_alignment/ZNF589-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR603XLW_ChIP_ZNF589_K562_ENCSR441ZYV_profile_pattern_2.n_1492-vs-ZNF589-201.alignment profile-znf_b1h_alignment/ZNF589-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR603XLW_ChIP_ZNF589_K562_ENCSR441ZYV_profile_pattern_7.n_771-vs-ZNF589-201.alignment profile-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR603XLW_ChIP_ZNF589_K562_ENCSR441ZYV_profile_pattern_8.n_527-vs-ZNF589-201.alignment profile-znf_b1h_alignment/ZNF589-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR827ZGB_ChIP_ZNF589_HepG2_ENCSR857FTR_profile_pattern_10.n_175-vs-ZNF589-201.alignment profile-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR827ZGB_ChIP_ZNF589_HepG2_ENCSR857FTR_profile_pattern_11.n_126-vs-ZNF589-201.alignment profile-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR827ZGB_ChIP_ZNF589_HepG2_ENCSR857FTR_profile_pattern_12.n_100-vs-ZNF589-201.alignment profile-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR827ZGB_ChIP_ZNF589_HepG2_ENCSR857FTR_profile_pattern_13.n_68-vs-ZNF589-201.alignment profile-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR827ZGB_ChIP_ZNF589_HepG2_ENCSR857FTR_profile_pattern_14.n_67-vs-ZNF589-201.alignment profile-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR827ZGB_ChIP_ZNF589_HepG2_ENCSR857FTR_profile_pattern_15.n_35-vs-ZNF589-201.alignment profile-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR827ZGB_ChIP_ZNF589_HepG2_ENCSR857FTR_profile_pattern_1.n_916-vs-ZNF589-201.alignment profile-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR827ZGB_ChIP_ZNF589_HepG2_ENCSR857FTR_profile_pattern_2.n_850-vs-ZNF589-201.alignment profile-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR827ZGB_ChIP_ZNF589_HepG2_ENCSR857FTR_profile_pattern_3.n_561-vs-ZNF589-201.alignment profile-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR827ZGB_ChIP_ZNF589_HepG2_ENCSR857FTR_profile_pattern_4.n_465-vs-ZNF589-201.alignment profile-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR827ZGB_ChIP_ZNF589_HepG2_ENCSR857FTR_profile_pattern_5.n_402-vs-ZNF589-201.alignment profile-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR827ZGB_ChIP_ZNF589_HepG2_ENCSR857FTR_profile_pattern_6.n_350-vs-ZNF589-201.alignment profile-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR827ZGB_ChIP_ZNF589_HepG2_ENCSR857FTR_profile_pattern_7.n_331-vs-ZNF589-201.alignment profile-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR827ZGB_ChIP_ZNF589_HepG2_ENCSR857FTR_profile_pattern_8.n_319-vs-ZNF589-201.alignment profile-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF589-201/pos_patterns.ENCSR827ZGB_ChIP_ZNF589_HepG2_ENCSR857FTR_profile_pattern_9.n_293-vs-ZNF589-201.alignment profile-znf_b1h_alignment/ZNF589-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/neg_patterns.ENCSR173ZVL_ChIP_ZNF592_GM12878_ENCSR341OZX_profile_pattern_0.n_50-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/neg_patterns.ENCSR173ZVL_ChIP_ZNF592_GM12878_ENCSR341OZX_profile_pattern_1.n_42-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/neg_patterns.ENCSR249BHQ_ChIP_ZNF592_K562_ENCSR949XNE_profile_pattern_0.n_345-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/neg_patterns.ENCSR249BHQ_ChIP_ZNF592_K562_ENCSR949XNE_profile_pattern_10.n_37-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/neg_patterns.ENCSR249BHQ_ChIP_ZNF592_K562_ENCSR949XNE_profile_pattern_11.n_35-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/neg_patterns.ENCSR249BHQ_ChIP_ZNF592_K562_ENCSR949XNE_profile_pattern_12.n_22-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/neg_patterns.ENCSR249BHQ_ChIP_ZNF592_K562_ENCSR949XNE_profile_pattern_1.n_158-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/neg_patterns.ENCSR249BHQ_ChIP_ZNF592_K562_ENCSR949XNE_profile_pattern_2.n_96-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/neg_patterns.ENCSR249BHQ_ChIP_ZNF592_K562_ENCSR949XNE_profile_pattern_3.n_81-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/neg_patterns.ENCSR249BHQ_ChIP_ZNF592_K562_ENCSR949XNE_profile_pattern_4.n_77-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/neg_patterns.ENCSR249BHQ_ChIP_ZNF592_K562_ENCSR949XNE_profile_pattern_5.n_61-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/neg_patterns.ENCSR249BHQ_ChIP_ZNF592_K562_ENCSR949XNE_profile_pattern_6.n_59-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/neg_patterns.ENCSR249BHQ_ChIP_ZNF592_K562_ENCSR949XNE_profile_pattern_7.n_57-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/neg_patterns.ENCSR249BHQ_ChIP_ZNF592_K562_ENCSR949XNE_profile_pattern_8.n_49-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/neg_patterns.ENCSR249BHQ_ChIP_ZNF592_K562_ENCSR949XNE_profile_pattern_9.n_49-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/neg_patterns.ENCSR701AQS_ChIP_ZNF592_MCF-7_ENCSR644KWE_profile_pattern_0.n_41-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/neg_patterns.ENCSR701AQS_ChIP_ZNF592_MCF-7_ENCSR644KWE_profile_pattern_1.n_39-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/neg_patterns.ENCSR701AQS_ChIP_ZNF592_MCF-7_ENCSR644KWE_profile_pattern_2.n_31-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/neg_patterns.ENCSR701AQS_ChIP_ZNF592_MCF-7_ENCSR644KWE_profile_pattern_3.n_28-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/neg_patterns.ENCSR701AQS_ChIP_ZNF592_MCF-7_ENCSR644KWE_profile_pattern_4.n_24-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/neg_patterns.ENCSR701AQS_ChIP_ZNF592_MCF-7_ENCSR644KWE_profile_pattern_5.n_22-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR028NUR_ChIP_ZNF592_MCF-7_ENCSR216OCY_profile_pattern_0.n_53-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR028NUR_ChIP_ZNF592_MCF-7_ENCSR216OCY_profile_pattern_1.n_53-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR028NUR_ChIP_ZNF592_MCF-7_ENCSR216OCY_profile_pattern_2.n_48-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR249BHQ_ChIP_ZNF592_K562_ENCSR949XNE_profile_pattern_1.n_4806-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR249BHQ_ChIP_ZNF592_K562_ENCSR949XNE_profile_pattern_20.n_59-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR249BHQ_ChIP_ZNF592_K562_ENCSR949XNE_profile_pattern_21.n_55-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR249BHQ_ChIP_ZNF592_K562_ENCSR949XNE_profile_pattern_22.n_55-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR249BHQ_ChIP_ZNF592_K562_ENCSR949XNE_profile_pattern_23.n_54-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR249BHQ_ChIP_ZNF592_K562_ENCSR949XNE_profile_pattern_24.n_42-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR249BHQ_ChIP_ZNF592_K562_ENCSR949XNE_profile_pattern_26.n_26-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR249BHQ_ChIP_ZNF592_K562_ENCSR949XNE_profile_pattern_27.n_20-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR249BHQ_ChIP_ZNF592_K562_ENCSR949XNE_profile_pattern_2.n_4524-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR249BHQ_ChIP_ZNF592_K562_ENCSR949XNE_profile_pattern_3.n_3603-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR249BHQ_ChIP_ZNF592_K562_ENCSR949XNE_profile_pattern_4.n_3405-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR249BHQ_ChIP_ZNF592_K562_ENCSR949XNE_profile_pattern_5.n_1568-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR249BHQ_ChIP_ZNF592_K562_ENCSR949XNE_profile_pattern_6.n_906-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR249BHQ_ChIP_ZNF592_K562_ENCSR949XNE_profile_pattern_7.n_720-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR249BHQ_ChIP_ZNF592_K562_ENCSR949XNE_profile_pattern_8.n_418-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR249BHQ_ChIP_ZNF592_K562_ENCSR949XNE_profile_pattern_9.n_395-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR701AQS_ChIP_ZNF592_MCF-7_ENCSR644KWE_profile_pattern_0.n_1614-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR701AQS_ChIP_ZNF592_MCF-7_ENCSR644KWE_profile_pattern_10.n_24-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR701AQS_ChIP_ZNF592_MCF-7_ENCSR644KWE_profile_pattern_11.n_21-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR701AQS_ChIP_ZNF592_MCF-7_ENCSR644KWE_profile_pattern_1.n_631-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR701AQS_ChIP_ZNF592_MCF-7_ENCSR644KWE_profile_pattern_2.n_375-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR701AQS_ChIP_ZNF592_MCF-7_ENCSR644KWE_profile_pattern_3.n_187-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR701AQS_ChIP_ZNF592_MCF-7_ENCSR644KWE_profile_pattern_4.n_76-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR701AQS_ChIP_ZNF592_MCF-7_ENCSR644KWE_profile_pattern_5.n_72-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR701AQS_ChIP_ZNF592_MCF-7_ENCSR644KWE_profile_pattern_6.n_66-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF592-201/pos_patterns.ENCSR701AQS_ChIP_ZNF592_MCF-7_ENCSR644KWE_profile_pattern_8.n_41-vs-ZNF592-201.alignment profile-znf_b1h_alignment/ZNF592-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF596-201/pos_patterns.ENCSR344SBD_ChIP_ZNF596_HEK293_ENCSR630UCD_profile_pattern_13.n_64-vs-ZNF596-201.alignment profile-znf_b1h_alignment/ZNF596-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF596-201/pos_patterns.ENCSR344SBD_ChIP_ZNF596_HEK293_ENCSR630UCD_profile_pattern_14.n_40-vs-ZNF596-201.alignment profile-znf_b1h_alignment/ZNF596-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF596-201/pos_patterns.ENCSR344SBD_ChIP_ZNF596_HEK293_ENCSR630UCD_profile_pattern_1.n_1093-vs-ZNF596-201.alignment profile-znf_b1h_alignment/ZNF596-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF596-201/pos_patterns.ENCSR344SBD_ChIP_ZNF596_HEK293_ENCSR630UCD_profile_pattern_2.n_827-vs-ZNF596-201.alignment profile-znf_b1h_alignment/ZNF596-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF596-201/pos_patterns.ENCSR344SBD_ChIP_ZNF596_HEK293_ENCSR630UCD_profile_pattern_3.n_775-vs-ZNF596-201.alignment profile-znf_b1h_alignment/ZNF596-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF596-201/pos_patterns.ENCSR344SBD_ChIP_ZNF596_HEK293_ENCSR630UCD_profile_pattern_4.n_643-vs-ZNF596-201.alignment profile-znf_b1h_alignment/ZNF596-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF596-201/pos_patterns.ENCSR344SBD_ChIP_ZNF596_HEK293_ENCSR630UCD_profile_pattern_5.n_629-vs-ZNF596-201.alignment profile-znf_b1h_alignment/ZNF596-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF596-201/pos_patterns.ENCSR344SBD_ChIP_ZNF596_HEK293_ENCSR630UCD_profile_pattern_6.n_257-vs-ZNF596-201.alignment profile-znf_b1h_alignment/ZNF596-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF596-201/pos_patterns.ENCSR344SBD_ChIP_ZNF596_HEK293_ENCSR630UCD_profile_pattern_7.n_216-vs-ZNF596-201.alignment profile-znf_b1h_alignment/ZNF596-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF596-201/pos_patterns.ENCSR344SBD_ChIP_ZNF596_HEK293_ENCSR630UCD_profile_pattern_8.n_209-vs-ZNF596-201.alignment profile-znf_b1h_alignment/ZNF596-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF596-201/pos_patterns.ENCSR344SBD_ChIP_ZNF596_HEK293_ENCSR630UCD_profile_pattern_9.n_183-vs-ZNF596-201.alignment profile-znf_b1h_alignment/ZNF596-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF597-201/pos_patterns.ENCSR669PVF_ChIP_ZNF597_HepG2_ENCSR725ASL_profile_pattern_0.n_159-vs-ZNF597-201.alignment profile-znf_b1h_alignment/ZNF597-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF597-201/pos_patterns.ENCSR669PVF_ChIP_ZNF597_HepG2_ENCSR725ASL_profile_pattern_10.n_55-vs-ZNF597-201.alignment profile-znf_b1h_alignment/ZNF597-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF597-201/pos_patterns.ENCSR669PVF_ChIP_ZNF597_HepG2_ENCSR725ASL_profile_pattern_11.n_47-vs-ZNF597-201.alignment profile-znf_b1h_alignment/ZNF597-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF597-201/pos_patterns.ENCSR669PVF_ChIP_ZNF597_HepG2_ENCSR725ASL_profile_pattern_1.n_127-vs-ZNF597-201.alignment profile-znf_b1h_alignment/ZNF597-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF597-201/pos_patterns.ENCSR669PVF_ChIP_ZNF597_HepG2_ENCSR725ASL_profile_pattern_2.n_120-vs-ZNF597-201.alignment profile-znf_b1h_alignment/ZNF597-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF597-201/pos_patterns.ENCSR669PVF_ChIP_ZNF597_HepG2_ENCSR725ASL_profile_pattern_3.n_92-vs-ZNF597-201.alignment profile-znf_b1h_alignment/ZNF597-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF597-201/pos_patterns.ENCSR669PVF_ChIP_ZNF597_HepG2_ENCSR725ASL_profile_pattern_4.n_92-vs-ZNF597-201.alignment profile-znf_b1h_alignment/ZNF597-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF597-201/pos_patterns.ENCSR669PVF_ChIP_ZNF597_HepG2_ENCSR725ASL_profile_pattern_5.n_76-vs-ZNF597-201.alignment profile-znf_b1h_alignment/ZNF597-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF597-201/pos_patterns.ENCSR669PVF_ChIP_ZNF597_HepG2_ENCSR725ASL_profile_pattern_6.n_69-vs-ZNF597-201.alignment profile-znf_b1h_alignment/ZNF597-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF597-201/pos_patterns.ENCSR669PVF_ChIP_ZNF597_HepG2_ENCSR725ASL_profile_pattern_7.n_66-vs-ZNF597-201.alignment profile-znf_b1h_alignment/ZNF597-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF597-201/pos_patterns.ENCSR669PVF_ChIP_ZNF597_HepG2_ENCSR725ASL_profile_pattern_8.n_63-vs-ZNF597-201.alignment profile-znf_b1h_alignment/ZNF597-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF597-201/pos_patterns.ENCSR669PVF_ChIP_ZNF597_HepG2_ENCSR725ASL_profile_pattern_9.n_61-vs-ZNF597-201.alignment profile-znf_b1h_alignment/ZNF597-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF600-201/pos_patterns.ENCSR017QBI_ChIP_ZNF600_HEK293_ENCSR638UMJ_profile_pattern_0.n_18350-vs-ZNF600-201.alignment profile-znf_b1h_alignment/ZNF600-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF600-201/pos_patterns.ENCSR017QBI_ChIP_ZNF600_HEK293_ENCSR638UMJ_profile_pattern_10.n_46-vs-ZNF600-201.alignment profile-znf_b1h_alignment/ZNF600-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF600-201/pos_patterns.ENCSR017QBI_ChIP_ZNF600_HEK293_ENCSR638UMJ_profile_pattern_11.n_39-vs-ZNF600-201.alignment profile-znf_b1h_alignment/ZNF600-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF600-201/pos_patterns.ENCSR017QBI_ChIP_ZNF600_HEK293_ENCSR638UMJ_profile_pattern_13.n_27-vs-ZNF600-201.alignment profile-znf_b1h_alignment/ZNF600-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF605-202/pos_patterns.ENCSR903JFF_ChIP_ZNF605_HepG2_ENCSR924AMT_profile_pattern_15.n_53-vs-ZNF605-202.alignment profile-znf_b1h_alignment/ZNF605-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF605-202/pos_patterns.ENCSR903JFF_ChIP_ZNF605_HepG2_ENCSR924AMT_profile_pattern_16.n_50-vs-ZNF605-202.alignment profile-znf_b1h_alignment/ZNF605-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF605-202/pos_patterns.ENCSR903JFF_ChIP_ZNF605_HepG2_ENCSR924AMT_profile_pattern_17.n_43-vs-ZNF605-202.alignment profile-znf_b1h_alignment/ZNF605-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF605-202/pos_patterns.ENCSR903JFF_ChIP_ZNF605_HepG2_ENCSR924AMT_profile_pattern_18.n_43-vs-ZNF605-202.alignment profile-znf_b1h_alignment/ZNF605-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF605-202/pos_patterns.ENCSR903JFF_ChIP_ZNF605_HepG2_ENCSR924AMT_profile_pattern_19.n_43-vs-ZNF605-202.alignment profile-znf_b1h_alignment/ZNF605-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF605-202/pos_patterns.ENCSR903JFF_ChIP_ZNF605_HepG2_ENCSR924AMT_profile_pattern_1.n_1864-vs-ZNF605-202.alignment profile-znf_b1h_alignment/ZNF605-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF605-202/pos_patterns.ENCSR903JFF_ChIP_ZNF605_HepG2_ENCSR924AMT_profile_pattern_20.n_28-vs-ZNF605-202.alignment profile-znf_b1h_alignment/ZNF605-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF605-202/pos_patterns.ENCSR903JFF_ChIP_ZNF605_HepG2_ENCSR924AMT_profile_pattern_2.n_970-vs-ZNF605-202.alignment profile-znf_b1h_alignment/ZNF605-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF605-202/pos_patterns.ENCSR903JFF_ChIP_ZNF605_HepG2_ENCSR924AMT_profile_pattern_3.n_644-vs-ZNF605-202.alignment profile-znf_b1h_alignment/ZNF605-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF605-202/pos_patterns.ENCSR903JFF_ChIP_ZNF605_HepG2_ENCSR924AMT_profile_pattern_4.n_518-vs-ZNF605-202.alignment profile-znf_b1h_alignment/ZNF605-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF605-202/pos_patterns.ENCSR903JFF_ChIP_ZNF605_HepG2_ENCSR924AMT_profile_pattern_5.n_285-vs-ZNF605-202.alignment profile-znf_b1h_alignment/ZNF605-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF605-202/pos_patterns.ENCSR903JFF_ChIP_ZNF605_HepG2_ENCSR924AMT_profile_pattern_6.n_194-vs-ZNF605-202.alignment profile-znf_b1h_alignment/ZNF605-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF605-202/pos_patterns.ENCSR903JFF_ChIP_ZNF605_HepG2_ENCSR924AMT_profile_pattern_7.n_185-vs-ZNF605-202.alignment profile-znf_b1h_alignment/ZNF605-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF605-202/pos_patterns.ENCSR903JFF_ChIP_ZNF605_HepG2_ENCSR924AMT_profile_pattern_8.n_171-vs-ZNF605-202.alignment profile-znf_b1h_alignment/ZNF605-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF605-202/pos_patterns.ENCSR903JFF_ChIP_ZNF605_HepG2_ENCSR924AMT_profile_pattern_9.n_112-vs-ZNF605-202.alignment profile-znf_b1h_alignment/ZNF605-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF607-201/pos_patterns.ENCSR788SXN_ChIP_ZNF607_HepG2_ENCSR744BXT_profile_pattern_0.n_1883-vs-ZNF607-201.alignment profile-znf_b1h_alignment/ZNF607-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF607-201/pos_patterns.ENCSR788SXN_ChIP_ZNF607_HepG2_ENCSR744BXT_profile_pattern_10.n_123-vs-ZNF607-201.alignment profile-znf_b1h_alignment/ZNF607-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF607-201/pos_patterns.ENCSR788SXN_ChIP_ZNF607_HepG2_ENCSR744BXT_profile_pattern_11.n_62-vs-ZNF607-201.alignment profile-znf_b1h_alignment/ZNF607-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF607-201/pos_patterns.ENCSR788SXN_ChIP_ZNF607_HepG2_ENCSR744BXT_profile_pattern_12.n_52-vs-ZNF607-201.alignment profile-znf_b1h_alignment/ZNF607-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF607-201/pos_patterns.ENCSR788SXN_ChIP_ZNF607_HepG2_ENCSR744BXT_profile_pattern_13.n_27-vs-ZNF607-201.alignment profile-znf_b1h_alignment/ZNF607-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF607-201/pos_patterns.ENCSR788SXN_ChIP_ZNF607_HepG2_ENCSR744BXT_profile_pattern_14.n_25-vs-ZNF607-201.alignment profile-znf_b1h_alignment/ZNF607-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF607-201/pos_patterns.ENCSR788SXN_ChIP_ZNF607_HepG2_ENCSR744BXT_profile_pattern_1.n_1249-vs-ZNF607-201.alignment profile-znf_b1h_alignment/ZNF607-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF607-201/pos_patterns.ENCSR788SXN_ChIP_ZNF607_HepG2_ENCSR744BXT_profile_pattern_2.n_951-vs-ZNF607-201.alignment profile-znf_b1h_alignment/ZNF607-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF607-201/pos_patterns.ENCSR788SXN_ChIP_ZNF607_HepG2_ENCSR744BXT_profile_pattern_3.n_582-vs-ZNF607-201.alignment profile-znf_b1h_alignment/ZNF607-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF607-201/pos_patterns.ENCSR788SXN_ChIP_ZNF607_HepG2_ENCSR744BXT_profile_pattern_4.n_374-vs-ZNF607-201.alignment profile-znf_b1h_alignment/ZNF607-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF607-201/pos_patterns.ENCSR788SXN_ChIP_ZNF607_HepG2_ENCSR744BXT_profile_pattern_5.n_251-vs-ZNF607-201.alignment profile-znf_b1h_alignment/ZNF607-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF607-201/pos_patterns.ENCSR788SXN_ChIP_ZNF607_HepG2_ENCSR744BXT_profile_pattern_6.n_241-vs-ZNF607-201.alignment profile-znf_b1h_alignment/ZNF607-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF607-201/pos_patterns.ENCSR788SXN_ChIP_ZNF607_HepG2_ENCSR744BXT_profile_pattern_7.n_221-vs-ZNF607-201.alignment profile-znf_b1h_alignment/ZNF607-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF607-201/pos_patterns.ENCSR788SXN_ChIP_ZNF607_HepG2_ENCSR744BXT_profile_pattern_9.n_128-vs-ZNF607-201.alignment profile-znf_b1h_alignment/ZNF607-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF608-201/pos_patterns.ENCSR277VXX_ChIP_ZNF608_HepG2_ENCSR012EGF_profile_pattern_9.n_280-vs-ZNF608-201.alignment profile-znf_b1h_alignment/ZNF608-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF608-201/pos_patterns.ENCSR837YGS_ChIP_ZNF608_SK-N-SH_ENCSR283DHR_profile_pattern_12.n_21-vs-ZNF608-201.alignment profile-znf_b1h_alignment/ZNF608-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF608-201/pos_patterns.ENCSR837YGS_ChIP_ZNF608_SK-N-SH_ENCSR283DHR_profile_pattern_13.n_20-vs-ZNF608-201.alignment profile-znf_b1h_alignment/ZNF608-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF608-201/pos_patterns.ENCSR837YGS_ChIP_ZNF608_SK-N-SH_ENCSR283DHR_profile_pattern_1.n_150-vs-ZNF608-201.alignment profile-znf_b1h_alignment/ZNF608-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF608-201/pos_patterns.ENCSR837YGS_ChIP_ZNF608_SK-N-SH_ENCSR283DHR_profile_pattern_2.n_123-vs-ZNF608-201.alignment profile-znf_b1h_alignment/ZNF608-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF608-201/pos_patterns.ENCSR837YGS_ChIP_ZNF608_SK-N-SH_ENCSR283DHR_profile_pattern_3.n_114-vs-ZNF608-201.alignment profile-znf_b1h_alignment/ZNF608-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF608-201/pos_patterns.ENCSR837YGS_ChIP_ZNF608_SK-N-SH_ENCSR283DHR_profile_pattern_4.n_112-vs-ZNF608-201.alignment profile-znf_b1h_alignment/ZNF608-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF608-201/pos_patterns.ENCSR837YGS_ChIP_ZNF608_SK-N-SH_ENCSR283DHR_profile_pattern_5.n_108-vs-ZNF608-201.alignment profile-znf_b1h_alignment/ZNF608-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF608-201/pos_patterns.ENCSR837YGS_ChIP_ZNF608_SK-N-SH_ENCSR283DHR_profile_pattern_6.n_103-vs-ZNF608-201.alignment profile-znf_b1h_alignment/ZNF608-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF608-201/pos_patterns.ENCSR837YGS_ChIP_ZNF608_SK-N-SH_ENCSR283DHR_profile_pattern_7.n_84-vs-ZNF608-201.alignment profile-znf_b1h_alignment/ZNF608-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF608-201/pos_patterns.ENCSR837YGS_ChIP_ZNF608_SK-N-SH_ENCSR283DHR_profile_pattern_8.n_66-vs-ZNF608-201.alignment profile-znf_b1h_alignment/ZNF608-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF608-201/pos_patterns.ENCSR837YGS_ChIP_ZNF608_SK-N-SH_ENCSR283DHR_profile_pattern_9.n_57-vs-ZNF608-201.alignment profile-znf_b1h_alignment/ZNF608-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF609-201/neg_patterns.ENCSR407BPU_ChIP_ZNF609_HepG2_ENCSR257LLI_profile_pattern_0.n_1614-vs-ZNF609-201.alignment profile-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF609-201/neg_patterns.ENCSR407BPU_ChIP_ZNF609_HepG2_ENCSR257LLI_profile_pattern_10.n_70-vs-ZNF609-201.alignment profile-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF609-201/neg_patterns.ENCSR407BPU_ChIP_ZNF609_HepG2_ENCSR257LLI_profile_pattern_11.n_56-vs-ZNF609-201.alignment profile-znf_b1h_alignment/ZNF609-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF609-201/neg_patterns.ENCSR407BPU_ChIP_ZNF609_HepG2_ENCSR257LLI_profile_pattern_13.n_52-vs-ZNF609-201.alignment profile-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF609-201/neg_patterns.ENCSR407BPU_ChIP_ZNF609_HepG2_ENCSR257LLI_profile_pattern_14.n_50-vs-ZNF609-201.alignment profile-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF609-201/neg_patterns.ENCSR407BPU_ChIP_ZNF609_HepG2_ENCSR257LLI_profile_pattern_15.n_47-vs-ZNF609-201.alignment profile-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF609-201/neg_patterns.ENCSR407BPU_ChIP_ZNF609_HepG2_ENCSR257LLI_profile_pattern_16.n_46-vs-ZNF609-201.alignment profile-znf_b1h_alignment/ZNF609-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF609-201/neg_patterns.ENCSR407BPU_ChIP_ZNF609_HepG2_ENCSR257LLI_profile_pattern_18.n_45-vs-ZNF609-201.alignment profile-znf_b1h_alignment/ZNF609-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF609-201/neg_patterns.ENCSR407BPU_ChIP_ZNF609_HepG2_ENCSR257LLI_profile_pattern_19.n_39-vs-ZNF609-201.alignment profile-znf_b1h_alignment/ZNF609-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF614-201/neg_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_profile_pattern_14.n_22-vs-ZNF614-201.alignment profile-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF614-201/neg_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_profile_pattern_1.n_65-vs-ZNF614-201.alignment profile-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF614-201/neg_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_profile_pattern_2.n_56-vs-ZNF614-201.alignment profile-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF614-201/neg_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_profile_pattern_3.n_53-vs-ZNF614-201.alignment profile-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF614-201/neg_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_profile_pattern_4.n_49-vs-ZNF614-201.alignment profile-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF614-201/neg_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_profile_pattern_5.n_49-vs-ZNF614-201.alignment profile-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF614-201/neg_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_profile_pattern_6.n_36-vs-ZNF614-201.alignment profile-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF614-201/neg_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_profile_pattern_7.n_35-vs-ZNF614-201.alignment profile-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF614-201/neg_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_profile_pattern_8.n_32-vs-ZNF614-201.alignment profile-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF614-201/neg_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_profile_pattern_9.n_31-vs-ZNF614-201.alignment profile-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF614-201/pos_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_profile_pattern_0.n_4270-vs-ZNF614-201.alignment profile-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF614-201/pos_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_profile_pattern_10.n_312-vs-ZNF614-201.alignment profile-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF614-201/pos_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_profile_pattern_11.n_301-vs-ZNF614-201.alignment profile-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF614-201/pos_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_profile_pattern_12.n_290-vs-ZNF614-201.alignment profile-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF614-201/pos_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_profile_pattern_13.n_264-vs-ZNF614-201.alignment profile-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF614-201/pos_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_profile_pattern_14.n_227-vs-ZNF614-201.alignment profile-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF614-201/pos_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_profile_pattern_15.n_197-vs-ZNF614-201.alignment profile-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF614-201/pos_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_profile_pattern_16.n_195-vs-ZNF614-201.alignment profile-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF614-201/pos_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_profile_pattern_17.n_126-vs-ZNF614-201.alignment profile-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF614-201/pos_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_profile_pattern_18.n_107-vs-ZNF614-201.alignment profile-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF614-201/pos_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_profile_pattern_19.n_34-vs-ZNF614-201.alignment profile-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF614-201/pos_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_profile_pattern_1.n_3142-vs-ZNF614-201.alignment profile-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF614-201/pos_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_profile_pattern_20.n_30-vs-ZNF614-201.alignment profile-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF614-201/pos_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_profile_pattern_21.n_24-vs-ZNF614-201.alignment profile-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF614-201/pos_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_profile_pattern_2.n_1780-vs-ZNF614-201.alignment profile-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF614-201/pos_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_profile_pattern_3.n_1762-vs-ZNF614-201.alignment profile-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF614-201/pos_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_profile_pattern_4.n_1250-vs-ZNF614-201.alignment profile-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF614-201/pos_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_profile_pattern_5.n_757-vs-ZNF614-201.alignment profile-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF614-201/pos_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_profile_pattern_6.n_525-vs-ZNF614-201.alignment profile-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF614-201/pos_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_profile_pattern_7.n_364-vs-ZNF614-201.alignment profile-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF614-201/pos_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_profile_pattern_8.n_346-vs-ZNF614-201.alignment profile-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF614-201/pos_patterns.ENCSR011CIR_ChIP_ZNF614_HepG2_ENCSR949AKD_profile_pattern_9.n_317-vs-ZNF614-201.alignment profile-znf_b1h_alignment/ZNF614-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF615-201/ChipExo_models_ZNF615_profile-pos.pattern_0.n_70-vs-ZNF615-201.alignment profile-znf_b1h_alignment/ZNF615-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF615-201/ChipExo_models_ZNF615_profile-pos.pattern_1.n_36-vs-ZNF615-201.alignment profile-znf_b1h_alignment/ZNF615-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF615-201/pos_patterns.ENCSR286LPH_ChIP_ZNF615_HepG2_ENCSR031NXX_profile_pattern_0.n_749-vs-ZNF615-201.alignment profile-znf_b1h_alignment/ZNF615-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF615-201/pos_patterns.ENCSR286LPH_ChIP_ZNF615_HepG2_ENCSR031NXX_profile_pattern_10.n_31-vs-ZNF615-201.alignment profile-znf_b1h_alignment/ZNF615-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF615-201/pos_patterns.ENCSR286LPH_ChIP_ZNF615_HepG2_ENCSR031NXX_profile_pattern_1.n_342-vs-ZNF615-201.alignment profile-znf_b1h_alignment/ZNF615-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF615-201/pos_patterns.ENCSR286LPH_ChIP_ZNF615_HepG2_ENCSR031NXX_profile_pattern_2.n_264-vs-ZNF615-201.alignment profile-znf_b1h_alignment/ZNF615-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF615-201/pos_patterns.ENCSR286LPH_ChIP_ZNF615_HepG2_ENCSR031NXX_profile_pattern_3.n_142-vs-ZNF615-201.alignment profile-znf_b1h_alignment/ZNF615-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF615-201/pos_patterns.ENCSR286LPH_ChIP_ZNF615_HepG2_ENCSR031NXX_profile_pattern_4.n_74-vs-ZNF615-201.alignment profile-znf_b1h_alignment/ZNF615-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF615-201/pos_patterns.ENCSR286LPH_ChIP_ZNF615_HepG2_ENCSR031NXX_profile_pattern_5.n_54-vs-ZNF615-201.alignment profile-znf_b1h_alignment/ZNF615-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF615-201/pos_patterns.ENCSR286LPH_ChIP_ZNF615_HepG2_ENCSR031NXX_profile_pattern_6.n_53-vs-ZNF615-201.alignment profile-znf_b1h_alignment/ZNF615-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF615-201/pos_patterns.ENCSR286LPH_ChIP_ZNF615_HepG2_ENCSR031NXX_profile_pattern_7.n_52-vs-ZNF615-201.alignment profile-znf_b1h_alignment/ZNF615-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF615-201/pos_patterns.ENCSR286LPH_ChIP_ZNF615_HepG2_ENCSR031NXX_profile_pattern_8.n_52-vs-ZNF615-201.alignment profile-znf_b1h_alignment/ZNF615-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF615-201/pos_patterns.ENCSR286LPH_ChIP_ZNF615_HepG2_ENCSR031NXX_profile_pattern_9.n_38-vs-ZNF615-201.alignment profile-znf_b1h_alignment/ZNF615-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF616-204/ChipExo_models_ZNF616_profile-pos.pattern_0.n_405-vs-ZNF616-204.alignment profile-znf_b1h_alignment/ZNF616-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF616-204/ChipExo_models_ZNF616_profile-pos.pattern_1.n_76-vs-ZNF616-204.alignment profile-znf_b1h_alignment/ZNF616-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF616-204/ChipExo_models_ZNF616_profile-pos.pattern_2.n_71-vs-ZNF616-204.alignment profile-znf_b1h_alignment/ZNF616-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF616-204/ChipExo_models_ZNF616_profile-pos.pattern_3.n_56-vs-ZNF616-204.alignment profile-znf_b1h_alignment/ZNF616-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF616-204/ChipExo_models_ZNF616_profile-pos.pattern_4.n_38-vs-ZNF616-204.alignment profile-znf_b1h_alignment/ZNF616-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF616-204/ChipExo_models_ZNF616_profile-pos.pattern_5.n_34-vs-ZNF616-204.alignment profile-znf_b1h_alignment/ZNF616-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF616-204/ChipExo_models_ZNF616_profile-pos.pattern_6.n_25-vs-ZNF616-204.alignment profile-znf_b1h_alignment/ZNF616-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF616-204/pos_patterns.ENCSR654PQY_ChIP_ZNF616_HepG2_ENCSR555TGG_profile_pattern_0.n_970-vs-ZNF616-204.alignment profile-znf_b1h_alignment/ZNF616-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF616-204/pos_patterns.ENCSR654PQY_ChIP_ZNF616_HepG2_ENCSR555TGG_profile_pattern_10.n_61-vs-ZNF616-204.alignment profile-znf_b1h_alignment/ZNF616-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF616-204/pos_patterns.ENCSR654PQY_ChIP_ZNF616_HepG2_ENCSR555TGG_profile_pattern_11.n_59-vs-ZNF616-204.alignment profile-znf_b1h_alignment/ZNF616-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF616-204/pos_patterns.ENCSR654PQY_ChIP_ZNF616_HepG2_ENCSR555TGG_profile_pattern_12.n_55-vs-ZNF616-204.alignment profile-znf_b1h_alignment/ZNF616-204/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF616-204/pos_patterns.ENCSR654PQY_ChIP_ZNF616_HepG2_ENCSR555TGG_profile_pattern_14.n_45-vs-ZNF616-204.alignment profile-znf_b1h_alignment/ZNF616-204/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF619-201/pos_patterns.ENCSR613RDS_ChIP_ZNF619_HepG2_ENCSR516SXF_profile_pattern_13.n_50-vs-ZNF619-201.alignment profile-znf_b1h_alignment/ZNF619-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF619-201/pos_patterns.ENCSR613RDS_ChIP_ZNF619_HepG2_ENCSR516SXF_profile_pattern_14.n_39-vs-ZNF619-201.alignment profile-znf_b1h_alignment/ZNF619-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF619-201/pos_patterns.ENCSR613RDS_ChIP_ZNF619_HepG2_ENCSR516SXF_profile_pattern_15.n_39-vs-ZNF619-201.alignment profile-znf_b1h_alignment/ZNF619-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF619-201/pos_patterns.ENCSR613RDS_ChIP_ZNF619_HepG2_ENCSR516SXF_profile_pattern_16.n_33-vs-ZNF619-201.alignment profile-znf_b1h_alignment/ZNF619-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF619-201/pos_patterns.ENCSR613RDS_ChIP_ZNF619_HepG2_ENCSR516SXF_profile_pattern_17.n_23-vs-ZNF619-201.alignment profile-znf_b1h_alignment/ZNF619-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF619-201/pos_patterns.ENCSR613RDS_ChIP_ZNF619_HepG2_ENCSR516SXF_profile_pattern_18.n_22-vs-ZNF619-201.alignment profile-znf_b1h_alignment/ZNF619-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF619-201/pos_patterns.ENCSR613RDS_ChIP_ZNF619_HepG2_ENCSR516SXF_profile_pattern_1.n_1143-vs-ZNF619-201.alignment profile-znf_b1h_alignment/ZNF619-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF619-201/pos_patterns.ENCSR613RDS_ChIP_ZNF619_HepG2_ENCSR516SXF_profile_pattern_2.n_1009-vs-ZNF619-201.alignment profile-znf_b1h_alignment/ZNF619-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF619-201/pos_patterns.ENCSR613RDS_ChIP_ZNF619_HepG2_ENCSR516SXF_profile_pattern_3.n_759-vs-ZNF619-201.alignment profile-znf_b1h_alignment/ZNF619-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF619-201/pos_patterns.ENCSR613RDS_ChIP_ZNF619_HepG2_ENCSR516SXF_profile_pattern_4.n_464-vs-ZNF619-201.alignment profile-znf_b1h_alignment/ZNF619-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF619-201/pos_patterns.ENCSR613RDS_ChIP_ZNF619_HepG2_ENCSR516SXF_profile_pattern_5.n_347-vs-ZNF619-201.alignment profile-znf_b1h_alignment/ZNF619-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF619-201/pos_patterns.ENCSR613RDS_ChIP_ZNF619_HepG2_ENCSR516SXF_profile_pattern_6.n_316-vs-ZNF619-201.alignment profile-znf_b1h_alignment/ZNF619-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF619-201/pos_patterns.ENCSR613RDS_ChIP_ZNF619_HepG2_ENCSR516SXF_profile_pattern_7.n_294-vs-ZNF619-201.alignment profile-znf_b1h_alignment/ZNF619-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF619-201/pos_patterns.ENCSR613RDS_ChIP_ZNF619_HepG2_ENCSR516SXF_profile_pattern_8.n_290-vs-ZNF619-201.alignment profile-znf_b1h_alignment/ZNF619-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF619-201/pos_patterns.ENCSR613RDS_ChIP_ZNF619_HepG2_ENCSR516SXF_profile_pattern_9.n_280-vs-ZNF619-201.alignment profile-znf_b1h_alignment/ZNF619-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF620-201/ChipExo_models_ZNF620_profile-pos.pattern_0.n_42-vs-ZNF620-201.alignment profile-znf_b1h_alignment/ZNF620-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF620-201/ChipExo_models_ZNF620_profile-pos.pattern_1.n_26-vs-ZNF620-201.alignment profile-znf_b1h_alignment/ZNF620-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF621-202/ChipExo_models_ZNF621_profile-pos.pattern_0.n_98-vs-ZNF621-202.alignment profile-znf_b1h_alignment/ZNF621-202/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF621-202/neg_patterns.ENCSR858FAN_ChIP_ZNF621_HEK293_ENCSR710WKS_profile_pattern_1.n_33-vs-ZNF621-202.alignment profile-znf_b1h_alignment/ZNF621-202/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF624-201/pos_patterns.ENCSR878DES_ChIP_ZNF624_HEK293_ENCSR785YGG_profile_pattern_2.n_61-vs-ZNF624-201.alignment profile-znf_b1h_alignment/ZNF624-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF624-201/pos_patterns.ENCSR878DES_ChIP_ZNF624_HEK293_ENCSR785YGG_profile_pattern_3.n_32-vs-ZNF624-201.alignment profile-znf_b1h_alignment/ZNF624-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF626-204/ChipExo_models_ZNF626_profile-pos.pattern_0.n_78-vs-ZNF626-204.alignment profile-znf_b1h_alignment/ZNF626-204/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF626-204/ChipExo_models_ZNF626_profile-pos.pattern_2.n_58-vs-ZNF626-204.alignment profile-znf_b1h_alignment/ZNF626-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF626-204/ChipExo_models_ZNF626_profile-pos.pattern_3.n_48-vs-ZNF626-204.alignment profile-znf_b1h_alignment/ZNF626-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF626-204/ChipExo_models_ZNF626_profile-pos.pattern_4.n_21-vs-ZNF626-204.alignment profile-znf_b1h_alignment/ZNF626-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF626-204/pos_patterns.ENCSR588MQZ_ChIP_ZNF626_HEK293_ENCSR178IZT_profile_pattern_0.n_190-vs-ZNF626-204.alignment profile-znf_b1h_alignment/ZNF626-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF626-204/pos_patterns.ENCSR588MQZ_ChIP_ZNF626_HEK293_ENCSR178IZT_profile_pattern_10.n_34-vs-ZNF626-204.alignment profile-znf_b1h_alignment/ZNF626-204/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF626-204/pos_patterns.ENCSR588MQZ_ChIP_ZNF626_HEK293_ENCSR178IZT_profile_pattern_12.n_33-vs-ZNF626-204.alignment profile-znf_b1h_alignment/ZNF626-204/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF626-204/pos_patterns.ENCSR588MQZ_ChIP_ZNF626_HEK293_ENCSR178IZT_profile_pattern_14.n_31-vs-ZNF626-204.alignment profile-znf_b1h_alignment/ZNF626-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF626-204/pos_patterns.ENCSR588MQZ_ChIP_ZNF626_HEK293_ENCSR178IZT_profile_pattern_15.n_29-vs-ZNF626-204.alignment profile-znf_b1h_alignment/ZNF626-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF626-204/pos_patterns.ENCSR588MQZ_ChIP_ZNF626_HEK293_ENCSR178IZT_profile_pattern_16.n_27-vs-ZNF626-204.alignment profile-znf_b1h_alignment/ZNF626-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF626-204/pos_patterns.ENCSR588MQZ_ChIP_ZNF626_HEK293_ENCSR178IZT_profile_pattern_17.n_27-vs-ZNF626-204.alignment profile-znf_b1h_alignment/ZNF626-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF626-204/pos_patterns.ENCSR588MQZ_ChIP_ZNF626_HEK293_ENCSR178IZT_profile_pattern_18.n_22-vs-ZNF626-204.alignment profile-znf_b1h_alignment/ZNF626-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF626-204/pos_patterns.ENCSR588MQZ_ChIP_ZNF626_HEK293_ENCSR178IZT_profile_pattern_19.n_21-vs-ZNF626-204.alignment profile-znf_b1h_alignment/ZNF626-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF626-204/pos_patterns.ENCSR588MQZ_ChIP_ZNF626_HEK293_ENCSR178IZT_profile_pattern_1.n_177-vs-ZNF626-204.alignment profile-znf_b1h_alignment/ZNF626-204/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF626-204/pos_patterns.ENCSR588MQZ_ChIP_ZNF626_HEK293_ENCSR178IZT_profile_pattern_2.n_139-vs-ZNF626-204.alignment profile-znf_b1h_alignment/ZNF626-204/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF629-201/pos_patterns.ENCSR351NON_ChIP_ZNF629_HEK293_ENCSR205FSW_profile_pattern_7.n_125-vs-ZNF629-201.alignment profile-znf_b1h_alignment/ZNF629-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF629-201/pos_patterns.ENCSR351NON_ChIP_ZNF629_HEK293_ENCSR205FSW_profile_pattern_9.n_56-vs-ZNF629-201.alignment profile-znf_b1h_alignment/ZNF629-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF629-201/pos_patterns.ENCSR363ASY_ChIP_ZNF629_HepG2_ENCSR465FQP_profile_pattern_10.n_33-vs-ZNF629-201.alignment profile-znf_b1h_alignment/ZNF629-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF629-201/pos_patterns.ENCSR363ASY_ChIP_ZNF629_HepG2_ENCSR465FQP_profile_pattern_1.n_1196-vs-ZNF629-201.alignment profile-znf_b1h_alignment/ZNF629-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF629-201/pos_patterns.ENCSR363ASY_ChIP_ZNF629_HepG2_ENCSR465FQP_profile_pattern_2.n_612-vs-ZNF629-201.alignment profile-znf_b1h_alignment/ZNF629-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF629-201/pos_patterns.ENCSR363ASY_ChIP_ZNF629_HepG2_ENCSR465FQP_profile_pattern_3.n_125-vs-ZNF629-201.alignment profile-znf_b1h_alignment/ZNF629-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF629-201/pos_patterns.ENCSR363ASY_ChIP_ZNF629_HepG2_ENCSR465FQP_profile_pattern_4.n_112-vs-ZNF629-201.alignment profile-znf_b1h_alignment/ZNF629-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF629-201/pos_patterns.ENCSR363ASY_ChIP_ZNF629_HepG2_ENCSR465FQP_profile_pattern_5.n_102-vs-ZNF629-201.alignment profile-znf_b1h_alignment/ZNF629-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF629-201/pos_patterns.ENCSR363ASY_ChIP_ZNF629_HepG2_ENCSR465FQP_profile_pattern_6.n_70-vs-ZNF629-201.alignment profile-znf_b1h_alignment/ZNF629-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF629-201/pos_patterns.ENCSR363ASY_ChIP_ZNF629_HepG2_ENCSR465FQP_profile_pattern_7.n_68-vs-ZNF629-201.alignment profile-znf_b1h_alignment/ZNF629-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF629-201/pos_patterns.ENCSR363ASY_ChIP_ZNF629_HepG2_ENCSR465FQP_profile_pattern_8.n_53-vs-ZNF629-201.alignment profile-znf_b1h_alignment/ZNF629-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF629-201/pos_patterns.ENCSR363ASY_ChIP_ZNF629_HepG2_ENCSR465FQP_profile_pattern_9.n_34-vs-ZNF629-201.alignment profile-znf_b1h_alignment/ZNF629-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/neg_patterns.ENCSR080CST_ChIP_ZNF639_HEK293_ENCSR310ZJL_profile_pattern_0.n_114-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/neg_patterns.ENCSR080CST_ChIP_ZNF639_HEK293_ENCSR310ZJL_profile_pattern_1.n_63-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/neg_patterns.ENCSR080CST_ChIP_ZNF639_HEK293_ENCSR310ZJL_profile_pattern_2.n_37-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/neg_patterns.ENCSR080CST_ChIP_ZNF639_HEK293_ENCSR310ZJL_profile_pattern_3.n_25-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/neg_patterns.ENCSR080CST_ChIP_ZNF639_HEK293_ENCSR310ZJL_profile_pattern_4.n_25-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/neg_patterns.ENCSR497VFH_ChIP_ZNF639_K562_ENCSR276YPM_profile_pattern_0.n_291-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/neg_patterns.ENCSR497VFH_ChIP_ZNF639_K562_ENCSR276YPM_profile_pattern_1.n_219-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/neg_patterns.ENCSR497VFH_ChIP_ZNF639_K562_ENCSR276YPM_profile_pattern_2.n_111-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/neg_patterns.ENCSR497VFH_ChIP_ZNF639_K562_ENCSR276YPM_profile_pattern_3.n_90-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/neg_patterns.ENCSR497VFH_ChIP_ZNF639_K562_ENCSR276YPM_profile_pattern_4.n_89-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/neg_patterns.ENCSR497VFH_ChIP_ZNF639_K562_ENCSR276YPM_profile_pattern_5.n_47-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/neg_patterns.ENCSR497VFH_ChIP_ZNF639_K562_ENCSR276YPM_profile_pattern_6.n_31-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/neg_patterns.ENCSR497VFH_ChIP_ZNF639_K562_ENCSR276YPM_profile_pattern_7.n_28-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/neg_patterns.ENCSR497VFH_ChIP_ZNF639_K562_ENCSR276YPM_profile_pattern_8.n_27-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/neg_patterns.ENCSR845BCL_ChIP_ZNF639_K562_ENCSR144EUX_profile_pattern_0.n_57-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/neg_patterns.ENCSR845BCL_ChIP_ZNF639_K562_ENCSR144EUX_profile_pattern_1.n_51-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/neg_patterns.ENCSR845BCL_ChIP_ZNF639_K562_ENCSR144EUX_profile_pattern_2.n_43-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/neg_patterns.ENCSR845BCL_ChIP_ZNF639_K562_ENCSR144EUX_profile_pattern_3.n_27-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/neg_patterns.ENCSR845BCL_ChIP_ZNF639_K562_ENCSR144EUX_profile_pattern_5.n_21-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR497VFH_ChIP_ZNF639_K562_ENCSR276YPM_profile_pattern_0.n_654-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR497VFH_ChIP_ZNF639_K562_ENCSR276YPM_profile_pattern_11.n_150-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR497VFH_ChIP_ZNF639_K562_ENCSR276YPM_profile_pattern_12.n_139-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR497VFH_ChIP_ZNF639_K562_ENCSR276YPM_profile_pattern_13.n_115-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR497VFH_ChIP_ZNF639_K562_ENCSR276YPM_profile_pattern_14.n_107-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR497VFH_ChIP_ZNF639_K562_ENCSR276YPM_profile_pattern_15.n_78-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR497VFH_ChIP_ZNF639_K562_ENCSR276YPM_profile_pattern_16.n_63-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR497VFH_ChIP_ZNF639_K562_ENCSR276YPM_profile_pattern_17.n_48-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR497VFH_ChIP_ZNF639_K562_ENCSR276YPM_profile_pattern_18.n_32-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR497VFH_ChIP_ZNF639_K562_ENCSR276YPM_profile_pattern_19.n_22-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR497VFH_ChIP_ZNF639_K562_ENCSR276YPM_profile_pattern_1.n_649-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR497VFH_ChIP_ZNF639_K562_ENCSR276YPM_profile_pattern_2.n_632-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR497VFH_ChIP_ZNF639_K562_ENCSR276YPM_profile_pattern_3.n_411-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR497VFH_ChIP_ZNF639_K562_ENCSR276YPM_profile_pattern_4.n_316-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR497VFH_ChIP_ZNF639_K562_ENCSR276YPM_profile_pattern_5.n_287-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR497VFH_ChIP_ZNF639_K562_ENCSR276YPM_profile_pattern_6.n_264-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR497VFH_ChIP_ZNF639_K562_ENCSR276YPM_profile_pattern_7.n_223-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR497VFH_ChIP_ZNF639_K562_ENCSR276YPM_profile_pattern_8.n_197-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR497VFH_ChIP_ZNF639_K562_ENCSR276YPM_profile_pattern_9.n_173-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR665UFC_ChIP_ZNF639_HepG2_ENCSR246NJE_profile_pattern_0.n_2233-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR665UFC_ChIP_ZNF639_HepG2_ENCSR246NJE_profile_pattern_10.n_236-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR665UFC_ChIP_ZNF639_HepG2_ENCSR246NJE_profile_pattern_11.n_218-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR665UFC_ChIP_ZNF639_HepG2_ENCSR246NJE_profile_pattern_12.n_211-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR665UFC_ChIP_ZNF639_HepG2_ENCSR246NJE_profile_pattern_13.n_90-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR665UFC_ChIP_ZNF639_HepG2_ENCSR246NJE_profile_pattern_14.n_86-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR665UFC_ChIP_ZNF639_HepG2_ENCSR246NJE_profile_pattern_15.n_39-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR665UFC_ChIP_ZNF639_HepG2_ENCSR246NJE_profile_pattern_16.n_29-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR665UFC_ChIP_ZNF639_HepG2_ENCSR246NJE_profile_pattern_1.n_909-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR665UFC_ChIP_ZNF639_HepG2_ENCSR246NJE_profile_pattern_3.n_329-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR949NVY_ChIP_ZNF639_K562_ENCSR604XQT_profile_pattern_10.n_185-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR949NVY_ChIP_ZNF639_K562_ENCSR604XQT_profile_pattern_11.n_133-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR949NVY_ChIP_ZNF639_K562_ENCSR604XQT_profile_pattern_13.n_101-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR949NVY_ChIP_ZNF639_K562_ENCSR604XQT_profile_pattern_14.n_97-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR949NVY_ChIP_ZNF639_K562_ENCSR604XQT_profile_pattern_15.n_67-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR949NVY_ChIP_ZNF639_K562_ENCSR604XQT_profile_pattern_16.n_59-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR949NVY_ChIP_ZNF639_K562_ENCSR604XQT_profile_pattern_17.n_20-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR949NVY_ChIP_ZNF639_K562_ENCSR604XQT_profile_pattern_1.n_3623-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR949NVY_ChIP_ZNF639_K562_ENCSR604XQT_profile_pattern_2.n_1404-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR949NVY_ChIP_ZNF639_K562_ENCSR604XQT_profile_pattern_3.n_515-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR949NVY_ChIP_ZNF639_K562_ENCSR604XQT_profile_pattern_4.n_433-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR949NVY_ChIP_ZNF639_K562_ENCSR604XQT_profile_pattern_6.n_338-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR949NVY_ChIP_ZNF639_K562_ENCSR604XQT_profile_pattern_8.n_227-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF639-201/pos_patterns.ENCSR949NVY_ChIP_ZNF639_K562_ENCSR604XQT_profile_pattern_9.n_196-vs-ZNF639-201.alignment profile-znf_b1h_alignment/ZNF639-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF641-201/ChipExo_models_ZNF641_profile-pos.pattern_0.n_141-vs-ZNF641-201.alignment profile-znf_b1h_alignment/ZNF641-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF641-201/ChipExo_models_ZNF641_profile-pos.pattern_1.n_58-vs-ZNF641-201.alignment profile-znf_b1h_alignment/ZNF641-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF641-201/ChipExo_models_ZNF641_profile-pos.pattern_2.n_31-vs-ZNF641-201.alignment profile-znf_b1h_alignment/ZNF641-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF641-201/ChipExo_models_ZNF641_profile-pos.pattern_3.n_25-vs-ZNF641-201.alignment profile-znf_b1h_alignment/ZNF641-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/neg_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_0.n_254-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/neg_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_1.n_157-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/neg_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_3.n_75-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/neg_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_4.n_57-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/neg_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_5.n_47-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/neg_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_7.n_27-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/neg_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_2.n_97-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/neg_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_5.n_59-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/neg_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_8.n_38-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/neg_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_9.n_35-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_0.n_6960-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_10.n_226-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_11.n_223-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_12.n_215-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_13.n_159-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_14.n_83-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_15.n_65-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_16.n_59-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_17.n_55-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_18.n_43-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_19.n_29-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_1.n_3635-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_20.n_20-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_2.n_3575-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_3.n_1812-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_4.n_1659-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_5.n_1618-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_6.n_1091-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_7.n_832-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_8.n_378-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_9.n_319-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_0.n_5379-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_10.n_216-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_11.n_104-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_12.n_91-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_13.n_83-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_14.n_80-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_15.n_75-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_16.n_63-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_17.n_47-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_18.n_44-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_19.n_39-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_1.n_1195-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_20.n_38-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_21.n_26-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_22.n_21-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_23.n_21-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_24.n_21-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_2.n_1171-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_3.n_939-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_4.n_914-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_5.n_888-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_6.n_743-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_7.n_327-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-201/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_9.n_261-vs-ZNF644-201.alignment profile-znf_b1h_alignment/ZNF644-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/neg_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_0.n_254-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/neg_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_2.n_82-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/neg_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_4.n_57-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/neg_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_7.n_27-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/neg_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_8.n_26-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/neg_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_0.n_831-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/neg_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_10.n_33-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/neg_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_11.n_24-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/neg_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_1.n_249-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/neg_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_2.n_97-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/neg_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_3.n_80-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/neg_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_4.n_61-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/neg_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_5.n_59-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/neg_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_6.n_52-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/neg_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_7.n_43-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/neg_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_8.n_38-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/neg_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_9.n_35-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_0.n_6960-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_10.n_226-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_11.n_223-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_12.n_215-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_13.n_159-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_14.n_83-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_15.n_65-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_16.n_59-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_17.n_55-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_18.n_43-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_19.n_29-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_1.n_3635-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_20.n_20-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_2.n_3575-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_3.n_1812-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_4.n_1659-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_5.n_1618-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_6.n_1091-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_7.n_832-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_8.n_378-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR578CXC_ChIP_ZNF644_HepG2_ENCSR165NXA_profile_pattern_9.n_319-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_0.n_5379-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_10.n_216-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_11.n_104-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_12.n_91-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_13.n_83-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_14.n_80-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_15.n_75-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_16.n_63-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_17.n_47-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_18.n_44-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_19.n_39-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_7.n_327-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF644-212/pos_patterns.ENCSR729HVR_ChIP_ZNF644_K562_ENCSR438FZD_profile_pattern_9.n_261-vs-ZNF644-212.alignment profile-znf_b1h_alignment/ZNF644-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF646-201/neg_patterns.ENCSR488ZNK_ChIP_ZNF646_HepG2_ENCSR246WPX_profile_pattern_0.n_56-vs-ZNF646-201.alignment profile-znf_b1h_alignment/ZNF646-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF646-201/neg_patterns.ENCSR488ZNK_ChIP_ZNF646_HepG2_ENCSR246WPX_profile_pattern_1.n_35-vs-ZNF646-201.alignment profile-znf_b1h_alignment/ZNF646-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF646-201/neg_patterns.ENCSR488ZNK_ChIP_ZNF646_HepG2_ENCSR246WPX_profile_pattern_2.n_31-vs-ZNF646-201.alignment profile-znf_b1h_alignment/ZNF646-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF646-201/neg_patterns.ENCSR488ZNK_ChIP_ZNF646_HepG2_ENCSR246WPX_profile_pattern_3.n_20-vs-ZNF646-201.alignment profile-znf_b1h_alignment/ZNF646-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF646-201/pos_patterns.ENCSR488ZNK_ChIP_ZNF646_HepG2_ENCSR246WPX_profile_pattern_0.n_3157-vs-ZNF646-201.alignment profile-znf_b1h_alignment/ZNF646-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF646-201/pos_patterns.ENCSR488ZNK_ChIP_ZNF646_HepG2_ENCSR246WPX_profile_pattern_10.n_53-vs-ZNF646-201.alignment profile-znf_b1h_alignment/ZNF646-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF646-201/pos_patterns.ENCSR488ZNK_ChIP_ZNF646_HepG2_ENCSR246WPX_profile_pattern_11.n_52-vs-ZNF646-201.alignment profile-znf_b1h_alignment/ZNF646-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF646-201/pos_patterns.ENCSR488ZNK_ChIP_ZNF646_HepG2_ENCSR246WPX_profile_pattern_12.n_51-vs-ZNF646-201.alignment profile-znf_b1h_alignment/ZNF646-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF646-201/pos_patterns.ENCSR488ZNK_ChIP_ZNF646_HepG2_ENCSR246WPX_profile_pattern_13.n_48-vs-ZNF646-201.alignment profile-znf_b1h_alignment/ZNF646-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF646-201/pos_patterns.ENCSR488ZNK_ChIP_ZNF646_HepG2_ENCSR246WPX_profile_pattern_14.n_39-vs-ZNF646-201.alignment profile-znf_b1h_alignment/ZNF646-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF646-201/pos_patterns.ENCSR488ZNK_ChIP_ZNF646_HepG2_ENCSR246WPX_profile_pattern_15.n_30-vs-ZNF646-201.alignment profile-znf_b1h_alignment/ZNF646-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF646-201/pos_patterns.ENCSR488ZNK_ChIP_ZNF646_HepG2_ENCSR246WPX_profile_pattern_16.n_28-vs-ZNF646-201.alignment profile-znf_b1h_alignment/ZNF646-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF646-201/pos_patterns.ENCSR488ZNK_ChIP_ZNF646_HepG2_ENCSR246WPX_profile_pattern_17.n_28-vs-ZNF646-201.alignment profile-znf_b1h_alignment/ZNF646-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF646-201/pos_patterns.ENCSR488ZNK_ChIP_ZNF646_HepG2_ENCSR246WPX_profile_pattern_18.n_28-vs-ZNF646-201.alignment profile-znf_b1h_alignment/ZNF646-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF646-201/pos_patterns.ENCSR488ZNK_ChIP_ZNF646_HepG2_ENCSR246WPX_profile_pattern_19.n_25-vs-ZNF646-201.alignment profile-znf_b1h_alignment/ZNF646-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF646-201/pos_patterns.ENCSR488ZNK_ChIP_ZNF646_HepG2_ENCSR246WPX_profile_pattern_1.n_2145-vs-ZNF646-201.alignment profile-znf_b1h_alignment/ZNF646-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF646-201/pos_patterns.ENCSR488ZNK_ChIP_ZNF646_HepG2_ENCSR246WPX_profile_pattern_20.n_25-vs-ZNF646-201.alignment profile-znf_b1h_alignment/ZNF646-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF646-201/pos_patterns.ENCSR488ZNK_ChIP_ZNF646_HepG2_ENCSR246WPX_profile_pattern_21.n_23-vs-ZNF646-201.alignment profile-znf_b1h_alignment/ZNF646-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF646-201/pos_patterns.ENCSR488ZNK_ChIP_ZNF646_HepG2_ENCSR246WPX_profile_pattern_22.n_22-vs-ZNF646-201.alignment profile-znf_b1h_alignment/ZNF646-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF646-201/pos_patterns.ENCSR488ZNK_ChIP_ZNF646_HepG2_ENCSR246WPX_profile_pattern_2.n_323-vs-ZNF646-201.alignment profile-znf_b1h_alignment/ZNF646-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF646-201/pos_patterns.ENCSR488ZNK_ChIP_ZNF646_HepG2_ENCSR246WPX_profile_pattern_3.n_281-vs-ZNF646-201.alignment profile-znf_b1h_alignment/ZNF646-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF646-201/pos_patterns.ENCSR488ZNK_ChIP_ZNF646_HepG2_ENCSR246WPX_profile_pattern_4.n_267-vs-ZNF646-201.alignment profile-znf_b1h_alignment/ZNF646-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF646-201/pos_patterns.ENCSR488ZNK_ChIP_ZNF646_HepG2_ENCSR246WPX_profile_pattern_5.n_260-vs-ZNF646-201.alignment profile-znf_b1h_alignment/ZNF646-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF646-201/pos_patterns.ENCSR488ZNK_ChIP_ZNF646_HepG2_ENCSR246WPX_profile_pattern_6.n_238-vs-ZNF646-201.alignment profile-znf_b1h_alignment/ZNF646-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF646-201/pos_patterns.ENCSR488ZNK_ChIP_ZNF646_HepG2_ENCSR246WPX_profile_pattern_7.n_112-vs-ZNF646-201.alignment profile-znf_b1h_alignment/ZNF646-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF646-201/pos_patterns.ENCSR488ZNK_ChIP_ZNF646_HepG2_ENCSR246WPX_profile_pattern_8.n_73-vs-ZNF646-201.alignment profile-znf_b1h_alignment/ZNF646-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF646-201/pos_patterns.ENCSR488ZNK_ChIP_ZNF646_HepG2_ENCSR246WPX_profile_pattern_9.n_60-vs-ZNF646-201.alignment profile-znf_b1h_alignment/ZNF646-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF649-201/ChipExo_models_ZNF649_profile-pos.pattern_0.n_1068-vs-ZNF649-201.alignment profile-znf_b1h_alignment/ZNF649-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF649-201/ChipExo_models_ZNF649_profile-pos.pattern_1.n_259-vs-ZNF649-201.alignment profile-znf_b1h_alignment/ZNF649-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF649-201/ChipExo_models_ZNF649_profile-pos.pattern_2.n_142-vs-ZNF649-201.alignment profile-znf_b1h_alignment/ZNF649-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF649-201/ChipExo_models_ZNF649_profile-pos.pattern_3.n_21-vs-ZNF649-201.alignment profile-znf_b1h_alignment/ZNF649-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF649-201/ChipExo_models_ZNF649_profile-pos.pattern_4.n_20-vs-ZNF649-201.alignment profile-znf_b1h_alignment/ZNF649-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF649-207/ChipExo_models_ZNF649_profile-pos.pattern_0.n_1068-vs-ZNF649-207.alignment profile-znf_b1h_alignment/ZNF649-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF649-207/ChipExo_models_ZNF649_profile-pos.pattern_1.n_259-vs-ZNF649-207.alignment profile-znf_b1h_alignment/ZNF649-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF649-207/ChipExo_models_ZNF649_profile-pos.pattern_2.n_142-vs-ZNF649-207.alignment profile-znf_b1h_alignment/ZNF649-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF649-207/ChipExo_models_ZNF649_profile-pos.pattern_3.n_21-vs-ZNF649-207.alignment profile-znf_b1h_alignment/ZNF649-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF649-207/ChipExo_models_ZNF649_profile-pos.pattern_4.n_20-vs-ZNF649-207.alignment profile-znf_b1h_alignment/ZNF649-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF652-201/neg_patterns.ENCSR502GAX_ChIP_ZNF652_HepG2_ENCSR598EEN_profile_pattern_0.n_1240-vs-ZNF652-201.alignment profile-znf_b1h_alignment/ZNF652-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF652-201/neg_patterns.ENCSR502GAX_ChIP_ZNF652_HepG2_ENCSR598EEN_profile_pattern_11.n_49-vs-ZNF652-201.alignment profile-znf_b1h_alignment/ZNF652-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF654-201/pos_patterns.ENCSR504VDV_ChIP_ZNF654_HEK293_ENCSR464QSA_profile_pattern_12.n_52-vs-ZNF654-201.alignment profile-znf_b1h_alignment/ZNF654-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF654-201/pos_patterns.ENCSR504VDV_ChIP_ZNF654_HEK293_ENCSR464QSA_profile_pattern_1.n_3594-vs-ZNF654-201.alignment profile-znf_b1h_alignment/ZNF654-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF654-201/pos_patterns.ENCSR504VDV_ChIP_ZNF654_HEK293_ENCSR464QSA_profile_pattern_2.n_666-vs-ZNF654-201.alignment profile-znf_b1h_alignment/ZNF654-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF654-201/pos_patterns.ENCSR504VDV_ChIP_ZNF654_HEK293_ENCSR464QSA_profile_pattern_3.n_333-vs-ZNF654-201.alignment profile-znf_b1h_alignment/ZNF654-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF654-201/pos_patterns.ENCSR504VDV_ChIP_ZNF654_HEK293_ENCSR464QSA_profile_pattern_4.n_233-vs-ZNF654-201.alignment profile-znf_b1h_alignment/ZNF654-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF654-201/pos_patterns.ENCSR504VDV_ChIP_ZNF654_HEK293_ENCSR464QSA_profile_pattern_6.n_130-vs-ZNF654-201.alignment profile-znf_b1h_alignment/ZNF654-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF654-204/neg_patterns.ENCSR504VDV_ChIP_ZNF654_HEK293_ENCSR464QSA_profile_pattern_0.n_32-vs-ZNF654-204.alignment profile-znf_b1h_alignment/ZNF654-204/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF654-204/pos_patterns.ENCSR504VDV_ChIP_ZNF654_HEK293_ENCSR464QSA_profile_pattern_1.n_3594-vs-ZNF654-204.alignment profile-znf_b1h_alignment/ZNF654-204/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF660-201/pos_patterns.ENCSR283DOU_ChIP_ZNF660_HEK293_ENCSR216GEU_profile_pattern_2.n_2690-vs-ZNF660-201.alignment profile-znf_b1h_alignment/ZNF660-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF664-201/pos_patterns.ENCSR714LZQ_ChIP_ZNF664_HEK293_ENCSR782FWV_profile_pattern_2.n_2976-vs-ZNF664-201.alignment profile-znf_b1h_alignment/ZNF664-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF664-201/pos_patterns.ENCSR714LZQ_ChIP_ZNF664_HEK293_ENCSR782FWV_profile_pattern_5.n_80-vs-ZNF664-201.alignment profile-znf_b1h_alignment/ZNF664-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF667-201/ChipExo_models_ZNF667_profile-pos.pattern_0.n_140-vs-ZNF667-201.alignment profile-znf_b1h_alignment/ZNF667-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF667-201/ChipExo_models_ZNF667_profile-pos.pattern_1.n_65-vs-ZNF667-201.alignment profile-znf_b1h_alignment/ZNF667-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF667-201/ChipExo_models_ZNF667_profile-pos.pattern_2.n_28-vs-ZNF667-201.alignment profile-znf_b1h_alignment/ZNF667-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF667-201/ChipExo_models_ZNF667_profile-pos.pattern_3.n_22-vs-ZNF667-201.alignment profile-znf_b1h_alignment/ZNF667-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF667-201/Hughes_GR_models_ZNF667_profile-pos.pattern_0.n_89-vs-ZNF667-201.alignment profile-znf_b1h_alignment/ZNF667-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF667-201/Hughes_GR_models_ZNF667_profile-pos.pattern_1.n_38-vs-ZNF667-201.alignment profile-znf_b1h_alignment/ZNF667-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF667-201/Hughes_GR_models_ZNF667_profile-pos.pattern_2.n_24-vs-ZNF667-201.alignment profile-znf_b1h_alignment/ZNF667-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF667-201/Hughes_GR_models_ZNF667_profile-pos.pattern_3.n_21-vs-ZNF667-201.alignment profile-znf_b1h_alignment/ZNF667-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF668-201/neg_patterns.ENCSR682AAS_ChIP_ZNF668_K562_ENCSR699WOU_profile_pattern_1.n_253-vs-ZNF668-201.alignment profile-znf_b1h_alignment/ZNF668-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF668-201/neg_patterns.ENCSR682AAS_ChIP_ZNF668_K562_ENCSR699WOU_profile_pattern_2.n_209-vs-ZNF668-201.alignment profile-znf_b1h_alignment/ZNF668-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF668-201/neg_patterns.ENCSR682AAS_ChIP_ZNF668_K562_ENCSR699WOU_profile_pattern_4.n_177-vs-ZNF668-201.alignment profile-znf_b1h_alignment/ZNF668-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF674-201/pos_patterns.ENCSR171BKT_ChIP_ZNF674_HepG2_ENCSR909ILI_profile_pattern_4.n_287-vs-ZNF674-201.alignment profile-znf_b1h_alignment/ZNF674-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF674-201/pos_patterns.ENCSR171BKT_ChIP_ZNF674_HepG2_ENCSR909ILI_profile_pattern_6.n_187-vs-ZNF674-201.alignment profile-znf_b1h_alignment/ZNF674-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF674-201/pos_patterns.ENCSR171BKT_ChIP_ZNF674_HepG2_ENCSR909ILI_profile_pattern_8.n_120-vs-ZNF674-201.alignment profile-znf_b1h_alignment/ZNF674-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF674-201/pos_patterns.ENCSR171BKT_ChIP_ZNF674_HepG2_ENCSR909ILI_profile_pattern_9.n_95-vs-ZNF674-201.alignment profile-znf_b1h_alignment/ZNF674-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF675-201/ChipExo_models_ZNF675_profile-pos.pattern_0.n_4251-vs-ZNF675-201.alignment profile-znf_b1h_alignment/ZNF675-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF675-201/ChipExo_models_ZNF675_profile-pos.pattern_1.n_237-vs-ZNF675-201.alignment profile-znf_b1h_alignment/ZNF675-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF675-201/ChipExo_models_ZNF675_profile-pos.pattern_3.n_21-vs-ZNF675-201.alignment profile-znf_b1h_alignment/ZNF675-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF675-201/Hughes_NB_models_ZNF675_profile-neg.pattern_0.n_220-vs-ZNF675-201.alignment profile-znf_b1h_alignment/ZNF675-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF677-201/Hughes_GR_models_ZNF677_profile-pos.pattern_4.n_21-vs-ZNF677-201.alignment profile-znf_b1h_alignment/ZNF677-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF677-201/neg_patterns.ENCSR279KDC_ChIP_ZNF677_HEK293_ENCSR642ICI_profile_pattern_1.n_91-vs-ZNF677-201.alignment profile-znf_b1h_alignment/ZNF677-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF677-201/neg_patterns.ENCSR279KDC_ChIP_ZNF677_HEK293_ENCSR642ICI_profile_pattern_3.n_38-vs-ZNF677-201.alignment profile-znf_b1h_alignment/ZNF677-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF680-201/neg_patterns.ENCSR307CKC_ChIP_ZNF680_HEK293_ENCSR285CBS_profile_pattern_7.n_92-vs-ZNF680-201.alignment profile-znf_b1h_alignment/ZNF680-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF680-201/neg_patterns.ENCSR307CKC_ChIP_ZNF680_HEK293_ENCSR285CBS_profile_pattern_8.n_50-vs-ZNF680-201.alignment profile-znf_b1h_alignment/ZNF680-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF680-201/neg_patterns.ENCSR307CKC_ChIP_ZNF680_HEK293_ENCSR285CBS_profile_pattern_9.n_46-vs-ZNF680-201.alignment profile-znf_b1h_alignment/ZNF680-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF684-203/Hughes_NB_models_ZNF684_profile-pos.pattern_1.n_29-vs-ZNF684-203.alignment profile-znf_b1h_alignment/ZNF684-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF687-201/neg_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_profile_pattern_0.n_2804-vs-ZNF687-201.alignment profile-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF687-201/neg_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_profile_pattern_10.n_189-vs-ZNF687-201.alignment profile-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF687-201/neg_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_profile_pattern_11.n_156-vs-ZNF687-201.alignment profile-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF687-201/neg_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_profile_pattern_12.n_111-vs-ZNF687-201.alignment profile-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF687-201/neg_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_profile_pattern_13.n_59-vs-ZNF687-201.alignment profile-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF687-201/neg_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_profile_pattern_14.n_59-vs-ZNF687-201.alignment profile-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF687-201/neg_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_profile_pattern_15.n_20-vs-ZNF687-201.alignment profile-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF687-201/neg_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_profile_pattern_1.n_2221-vs-ZNF687-201.alignment profile-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF687-201/neg_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_profile_pattern_2.n_1431-vs-ZNF687-201.alignment profile-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF687-201/neg_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_profile_pattern_3.n_1210-vs-ZNF687-201.alignment profile-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF687-201/neg_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_profile_pattern_4.n_823-vs-ZNF687-201.alignment profile-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF687-201/neg_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_profile_pattern_5.n_618-vs-ZNF687-201.alignment profile-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF687-201/neg_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_profile_pattern_6.n_390-vs-ZNF687-201.alignment profile-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF687-201/neg_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_profile_pattern_7.n_287-vs-ZNF687-201.alignment profile-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF687-201/neg_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_profile_pattern_8.n_250-vs-ZNF687-201.alignment profile-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF687-201/neg_patterns.ENCSR647PSR_ChIP_ZNF687_HepG2_ENCSR650ZSP_profile_pattern_9.n_240-vs-ZNF687-201.alignment profile-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF687-201/neg_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_profile_pattern_0.n_33-vs-ZNF687-201.alignment profile-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF687-201/neg_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_profile_pattern_1.n_32-vs-ZNF687-201.alignment profile-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF687-201/neg_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_profile_pattern_2.n_31-vs-ZNF687-201.alignment profile-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF687-201/neg_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_profile_pattern_3.n_29-vs-ZNF687-201.alignment profile-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF687-201/neg_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_profile_pattern_4.n_28-vs-ZNF687-201.alignment profile-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF687-201/neg_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_profile_pattern_5.n_27-vs-ZNF687-201.alignment profile-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF687-201/neg_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_profile_pattern_6.n_24-vs-ZNF687-201.alignment profile-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF687-201/neg_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_profile_pattern_7.n_24-vs-ZNF687-201.alignment profile-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF687-201/neg_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_profile_pattern_8.n_21-vs-ZNF687-201.alignment profile-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF687-201/neg_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_profile_pattern_9.n_20-vs-ZNF687-201.alignment profile-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF687-201/neg_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_profile_pattern_0.n_53-vs-ZNF687-201.alignment profile-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF687-201/neg_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_profile_pattern_1.n_51-vs-ZNF687-201.alignment profile-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF687-201/neg_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_profile_pattern_2.n_45-vs-ZNF687-201.alignment profile-znf_b1h_alignment/ZNF687-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF687-201/neg_patterns.ENCSR899BKM_ChIP_ZNF687_MCF-7_ENCSR592RQD_profile_pattern_4.n_40-vs-ZNF687-201.alignment profile-znf_b1h_alignment/ZNF687-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_profile_pattern_14.n_481-vs-ZNF687-201.alignment profile-znf_b1h_alignment/ZNF687-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_profile_pattern_16.n_350-vs-ZNF687-201.alignment profile-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_profile_pattern_17.n_318-vs-ZNF687-201.alignment profile-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_profile_pattern_18.n_237-vs-ZNF687-201.alignment profile-znf_b1h_alignment/ZNF687-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_profile_pattern_19.n_127-vs-ZNF687-201.alignment profile-znf_b1h_alignment/ZNF687-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_profile_pattern_20.n_123-vs-ZNF687-201.alignment profile-znf_b1h_alignment/ZNF687-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_profile_pattern_24.n_65-vs-ZNF687-201.alignment profile-znf_b1h_alignment/ZNF687-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF687-201/pos_patterns.ENCSR859FDL_ChIP_ZNF687_GM12878_ENCSR941GFS_profile_pattern_29.n_33-vs-ZNF687-201.alignment profile-znf_b1h_alignment/ZNF687-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF691-201/pos_patterns.ENCSR130ZAR_ChIP_ZNF691_HepG2_ENCSR243YWR_profile_pattern_6.n_462-vs-ZNF691-201.alignment profile-znf_b1h_alignment/ZNF691-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF695-201/ChipExo_models_ZNF695_profile-pos.pattern_0.n_1394-vs-ZNF695-201.alignment profile-znf_b1h_alignment/ZNF695-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF695-201/ChipExo_models_ZNF695_profile-pos.pattern_2.n_802-vs-ZNF695-201.alignment profile-znf_b1h_alignment/ZNF695-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF695-201/ChipExo_models_ZNF695_profile-pos.pattern_4.n_174-vs-ZNF695-201.alignment profile-znf_b1h_alignment/ZNF695-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF695-201/ChipExo_models_ZNF695_profile-pos.pattern_6.n_116-vs-ZNF695-201.alignment profile-znf_b1h_alignment/ZNF695-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF695-201/ChipExo_models_ZNF695_profile-pos.pattern_7.n_96-vs-ZNF695-201.alignment profile-znf_b1h_alignment/ZNF695-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF695-201/ChipExo_models_ZNF695_profile-pos.pattern_8.n_64-vs-ZNF695-201.alignment profile-znf_b1h_alignment/ZNF695-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF695-201/ChipExo_models_ZNF695_profile-pos.pattern_9.n_62-vs-ZNF695-201.alignment profile-znf_b1h_alignment/ZNF695-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF695-201/neg_patterns.ENCSR187RGF_ChIP_ZNF695_K562_ENCSR363DCQ_profile_pattern_0.n_182-vs-ZNF695-201.alignment profile-znf_b1h_alignment/ZNF695-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF695-201/neg_patterns.ENCSR187RGF_ChIP_ZNF695_K562_ENCSR363DCQ_profile_pattern_10.n_24-vs-ZNF695-201.alignment profile-znf_b1h_alignment/ZNF695-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF695-201/neg_patterns.ENCSR187RGF_ChIP_ZNF695_K562_ENCSR363DCQ_profile_pattern_1.n_67-vs-ZNF695-201.alignment profile-znf_b1h_alignment/ZNF695-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF695-201/neg_patterns.ENCSR187RGF_ChIP_ZNF695_K562_ENCSR363DCQ_profile_pattern_2.n_54-vs-ZNF695-201.alignment profile-znf_b1h_alignment/ZNF695-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF695-201/neg_patterns.ENCSR187RGF_ChIP_ZNF695_K562_ENCSR363DCQ_profile_pattern_3.n_49-vs-ZNF695-201.alignment profile-znf_b1h_alignment/ZNF695-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF695-201/neg_patterns.ENCSR187RGF_ChIP_ZNF695_K562_ENCSR363DCQ_profile_pattern_5.n_39-vs-ZNF695-201.alignment profile-znf_b1h_alignment/ZNF695-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF695-201/neg_patterns.ENCSR187RGF_ChIP_ZNF695_K562_ENCSR363DCQ_profile_pattern_6.n_36-vs-ZNF695-201.alignment profile-znf_b1h_alignment/ZNF695-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF695-201/neg_patterns.ENCSR187RGF_ChIP_ZNF695_K562_ENCSR363DCQ_profile_pattern_7.n_28-vs-ZNF695-201.alignment profile-znf_b1h_alignment/ZNF695-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF695-201/neg_patterns.ENCSR187RGF_ChIP_ZNF695_K562_ENCSR363DCQ_profile_pattern_8.n_26-vs-ZNF695-201.alignment profile-znf_b1h_alignment/ZNF695-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF695-201/neg_patterns.ENCSR187RGF_ChIP_ZNF695_K562_ENCSR363DCQ_profile_pattern_9.n_25-vs-ZNF695-201.alignment profile-znf_b1h_alignment/ZNF695-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF695-201/pos_patterns.ENCSR187RGF_ChIP_ZNF695_K562_ENCSR363DCQ_profile_pattern_0.n_417-vs-ZNF695-201.alignment profile-znf_b1h_alignment/ZNF695-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF695-201/pos_patterns.ENCSR187RGF_ChIP_ZNF695_K562_ENCSR363DCQ_profile_pattern_10.n_20-vs-ZNF695-201.alignment profile-znf_b1h_alignment/ZNF695-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF695-201/pos_patterns.ENCSR187RGF_ChIP_ZNF695_K562_ENCSR363DCQ_profile_pattern_1.n_118-vs-ZNF695-201.alignment profile-znf_b1h_alignment/ZNF695-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF695-201/pos_patterns.ENCSR187RGF_ChIP_ZNF695_K562_ENCSR363DCQ_profile_pattern_2.n_77-vs-ZNF695-201.alignment profile-znf_b1h_alignment/ZNF695-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF695-201/pos_patterns.ENCSR187RGF_ChIP_ZNF695_K562_ENCSR363DCQ_profile_pattern_3.n_58-vs-ZNF695-201.alignment profile-znf_b1h_alignment/ZNF695-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF697-201/pos_patterns.ENCSR734WFB_ChIP_ZNF697_HepG2_ENCSR998VIY_profile_pattern_12.n_110-vs-ZNF697-201.alignment profile-znf_b1h_alignment/ZNF697-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF697-201/pos_patterns.ENCSR734WFB_ChIP_ZNF697_HepG2_ENCSR998VIY_profile_pattern_15.n_53-vs-ZNF697-201.alignment profile-znf_b1h_alignment/ZNF697-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF697-201/pos_patterns.ENCSR734WFB_ChIP_ZNF697_HepG2_ENCSR998VIY_profile_pattern_16.n_34-vs-ZNF697-201.alignment profile-znf_b1h_alignment/ZNF697-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF697-201/pos_patterns.ENCSR734WFB_ChIP_ZNF697_HepG2_ENCSR998VIY_profile_pattern_1.n_1406-vs-ZNF697-201.alignment profile-znf_b1h_alignment/ZNF697-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF697-201/pos_patterns.ENCSR734WFB_ChIP_ZNF697_HepG2_ENCSR998VIY_profile_pattern_2.n_1188-vs-ZNF697-201.alignment profile-znf_b1h_alignment/ZNF697-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF697-201/pos_patterns.ENCSR734WFB_ChIP_ZNF697_HepG2_ENCSR998VIY_profile_pattern_4.n_666-vs-ZNF697-201.alignment profile-znf_b1h_alignment/ZNF697-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF697-201/pos_patterns.ENCSR734WFB_ChIP_ZNF697_HepG2_ENCSR998VIY_profile_pattern_5.n_547-vs-ZNF697-201.alignment profile-znf_b1h_alignment/ZNF697-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF697-201/pos_patterns.ENCSR734WFB_ChIP_ZNF697_HepG2_ENCSR998VIY_profile_pattern_6.n_453-vs-ZNF697-201.alignment profile-znf_b1h_alignment/ZNF697-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF697-201/pos_patterns.ENCSR734WFB_ChIP_ZNF697_HepG2_ENCSR998VIY_profile_pattern_7.n_345-vs-ZNF697-201.alignment profile-znf_b1h_alignment/ZNF697-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF697-201/pos_patterns.ENCSR734WFB_ChIP_ZNF697_HepG2_ENCSR998VIY_profile_pattern_8.n_319-vs-ZNF697-201.alignment profile-znf_b1h_alignment/ZNF697-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF697-201/pos_patterns.ENCSR734WFB_ChIP_ZNF697_HepG2_ENCSR998VIY_profile_pattern_9.n_314-vs-ZNF697-201.alignment profile-znf_b1h_alignment/ZNF697-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF699-201/pos_patterns.ENCSR303SHG_ChIP_ZNF699_K562_ENCSR533DRR_profile_pattern_0.n_174-vs-ZNF699-201.alignment profile-znf_b1h_alignment/ZNF699-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF699-201/pos_patterns.ENCSR303SHG_ChIP_ZNF699_K562_ENCSR533DRR_profile_pattern_1.n_41-vs-ZNF699-201.alignment profile-znf_b1h_alignment/ZNF699-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF699-201/pos_patterns.ENCSR303SHG_ChIP_ZNF699_K562_ENCSR533DRR_profile_pattern_2.n_30-vs-ZNF699-201.alignment profile-znf_b1h_alignment/ZNF699-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF699-201/pos_patterns.ENCSR303SHG_ChIP_ZNF699_K562_ENCSR533DRR_profile_pattern_3.n_30-vs-ZNF699-201.alignment profile-znf_b1h_alignment/ZNF699-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF699-201/pos_patterns.ENCSR303SHG_ChIP_ZNF699_K562_ENCSR533DRR_profile_pattern_4.n_26-vs-ZNF699-201.alignment profile-znf_b1h_alignment/ZNF699-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF699-201/pos_patterns.ENCSR303SHG_ChIP_ZNF699_K562_ENCSR533DRR_profile_pattern_5.n_24-vs-ZNF699-201.alignment profile-znf_b1h_alignment/ZNF699-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF700-201/pos_patterns.ENCSR959BQO_ChIP_ZNF700_K562_ENCSR780OCG_profile_pattern_0.n_277-vs-ZNF700-201.alignment profile-znf_b1h_alignment/ZNF700-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF700-201/pos_patterns.ENCSR959BQO_ChIP_ZNF700_K562_ENCSR780OCG_profile_pattern_10.n_27-vs-ZNF700-201.alignment profile-znf_b1h_alignment/ZNF700-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF700-201/pos_patterns.ENCSR959BQO_ChIP_ZNF700_K562_ENCSR780OCG_profile_pattern_1.n_252-vs-ZNF700-201.alignment profile-znf_b1h_alignment/ZNF700-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF700-201/pos_patterns.ENCSR959BQO_ChIP_ZNF700_K562_ENCSR780OCG_profile_pattern_2.n_103-vs-ZNF700-201.alignment profile-znf_b1h_alignment/ZNF700-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF700-201/pos_patterns.ENCSR959BQO_ChIP_ZNF700_K562_ENCSR780OCG_profile_pattern_3.n_103-vs-ZNF700-201.alignment profile-znf_b1h_alignment/ZNF700-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF700-201/pos_patterns.ENCSR959BQO_ChIP_ZNF700_K562_ENCSR780OCG_profile_pattern_4.n_81-vs-ZNF700-201.alignment profile-znf_b1h_alignment/ZNF700-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF700-201/pos_patterns.ENCSR959BQO_ChIP_ZNF700_K562_ENCSR780OCG_profile_pattern_5.n_59-vs-ZNF700-201.alignment profile-znf_b1h_alignment/ZNF700-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF700-201/pos_patterns.ENCSR959BQO_ChIP_ZNF700_K562_ENCSR780OCG_profile_pattern_6.n_53-vs-ZNF700-201.alignment profile-znf_b1h_alignment/ZNF700-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF700-201/pos_patterns.ENCSR959BQO_ChIP_ZNF700_K562_ENCSR780OCG_profile_pattern_8.n_27-vs-ZNF700-201.alignment profile-znf_b1h_alignment/ZNF700-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF70-201/pos_patterns.ENCSR207GYC_ChIP_ZNF70_SK-N-SH_ENCSR954CQT_profile_pattern_6.n_139-vs-ZNF70-201.alignment profile-znf_b1h_alignment/ZNF70-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF70-201/pos_patterns.ENCSR207GYC_ChIP_ZNF70_SK-N-SH_ENCSR954CQT_profile_pattern_7.n_106-vs-ZNF70-201.alignment profile-znf_b1h_alignment/ZNF70-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF70-201/pos_patterns.ENCSR207GYC_ChIP_ZNF70_SK-N-SH_ENCSR954CQT_profile_pattern_9.n_85-vs-ZNF70-201.alignment profile-znf_b1h_alignment/ZNF70-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF704-201/neg_patterns.ENCSR523RGJ_ChIP_ZNF704_HepG2_ENCSR642AEQ_profile_pattern_0.n_29-vs-ZNF704-201.alignment profile-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR194KWL_ChIP_ZNF704_HEK293_ENCSR546QIV_profile_pattern_0.n_562-vs-ZNF704-201.alignment profile-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR194KWL_ChIP_ZNF704_HEK293_ENCSR546QIV_profile_pattern_1.n_224-vs-ZNF704-201.alignment profile-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR194KWL_ChIP_ZNF704_HEK293_ENCSR546QIV_profile_pattern_2.n_201-vs-ZNF704-201.alignment profile-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR194KWL_ChIP_ZNF704_HEK293_ENCSR546QIV_profile_pattern_3.n_87-vs-ZNF704-201.alignment profile-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR194KWL_ChIP_ZNF704_HEK293_ENCSR546QIV_profile_pattern_4.n_32-vs-ZNF704-201.alignment profile-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR523RGJ_ChIP_ZNF704_HepG2_ENCSR642AEQ_profile_pattern_0.n_1179-vs-ZNF704-201.alignment profile-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR523RGJ_ChIP_ZNF704_HepG2_ENCSR642AEQ_profile_pattern_10.n_179-vs-ZNF704-201.alignment profile-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR523RGJ_ChIP_ZNF704_HepG2_ENCSR642AEQ_profile_pattern_11.n_161-vs-ZNF704-201.alignment profile-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR523RGJ_ChIP_ZNF704_HepG2_ENCSR642AEQ_profile_pattern_12.n_154-vs-ZNF704-201.alignment profile-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR523RGJ_ChIP_ZNF704_HepG2_ENCSR642AEQ_profile_pattern_13.n_111-vs-ZNF704-201.alignment profile-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR523RGJ_ChIP_ZNF704_HepG2_ENCSR642AEQ_profile_pattern_14.n_104-vs-ZNF704-201.alignment profile-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR523RGJ_ChIP_ZNF704_HepG2_ENCSR642AEQ_profile_pattern_15.n_99-vs-ZNF704-201.alignment profile-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR523RGJ_ChIP_ZNF704_HepG2_ENCSR642AEQ_profile_pattern_16.n_91-vs-ZNF704-201.alignment profile-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR523RGJ_ChIP_ZNF704_HepG2_ENCSR642AEQ_profile_pattern_1.n_981-vs-ZNF704-201.alignment profile-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR523RGJ_ChIP_ZNF704_HepG2_ENCSR642AEQ_profile_pattern_2.n_792-vs-ZNF704-201.alignment profile-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR523RGJ_ChIP_ZNF704_HepG2_ENCSR642AEQ_profile_pattern_3.n_588-vs-ZNF704-201.alignment profile-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR523RGJ_ChIP_ZNF704_HepG2_ENCSR642AEQ_profile_pattern_4.n_530-vs-ZNF704-201.alignment profile-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR523RGJ_ChIP_ZNF704_HepG2_ENCSR642AEQ_profile_pattern_5.n_464-vs-ZNF704-201.alignment profile-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR523RGJ_ChIP_ZNF704_HepG2_ENCSR642AEQ_profile_pattern_6.n_335-vs-ZNF704-201.alignment profile-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR523RGJ_ChIP_ZNF704_HepG2_ENCSR642AEQ_profile_pattern_7.n_263-vs-ZNF704-201.alignment profile-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR523RGJ_ChIP_ZNF704_HepG2_ENCSR642AEQ_profile_pattern_8.n_260-vs-ZNF704-201.alignment profile-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF704-201/pos_patterns.ENCSR523RGJ_ChIP_ZNF704_HepG2_ENCSR642AEQ_profile_pattern_9.n_219-vs-ZNF704-201.alignment profile-znf_b1h_alignment/ZNF704-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF705G-201/ChipExo_models_ZNF705G_profile-pos.pattern_0.n_111-vs-ZNF705G-201.alignment profile-znf_b1h_alignment/ZNF705G-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF707-201/ChipExo_models_ZNF707_profile-pos.pattern_1.n_273-vs-ZNF707-201.alignment profile-znf_b1h_alignment/ZNF707-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR017XHZ_ChIP_ZNF707_HepG2_ENCSR043MDP_profile_pattern_14.n_83-vs-ZNF707-201.alignment profile-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR017XHZ_ChIP_ZNF707_HepG2_ENCSR043MDP_profile_pattern_15.n_63-vs-ZNF707-201.alignment profile-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR017XHZ_ChIP_ZNF707_HepG2_ENCSR043MDP_profile_pattern_16.n_52-vs-ZNF707-201.alignment profile-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR017XHZ_ChIP_ZNF707_HepG2_ENCSR043MDP_profile_pattern_17.n_48-vs-ZNF707-201.alignment profile-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR017XHZ_ChIP_ZNF707_HepG2_ENCSR043MDP_profile_pattern_18.n_45-vs-ZNF707-201.alignment profile-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR017XHZ_ChIP_ZNF707_HepG2_ENCSR043MDP_profile_pattern_19.n_40-vs-ZNF707-201.alignment profile-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR017XHZ_ChIP_ZNF707_HepG2_ENCSR043MDP_profile_pattern_1.n_343-vs-ZNF707-201.alignment profile-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR017XHZ_ChIP_ZNF707_HepG2_ENCSR043MDP_profile_pattern_20.n_22-vs-ZNF707-201.alignment profile-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR017XHZ_ChIP_ZNF707_HepG2_ENCSR043MDP_profile_pattern_2.n_230-vs-ZNF707-201.alignment profile-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR017XHZ_ChIP_ZNF707_HepG2_ENCSR043MDP_profile_pattern_3.n_203-vs-ZNF707-201.alignment profile-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR017XHZ_ChIP_ZNF707_HepG2_ENCSR043MDP_profile_pattern_4.n_175-vs-ZNF707-201.alignment profile-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR017XHZ_ChIP_ZNF707_HepG2_ENCSR043MDP_profile_pattern_5.n_148-vs-ZNF707-201.alignment profile-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR017XHZ_ChIP_ZNF707_HepG2_ENCSR043MDP_profile_pattern_6.n_137-vs-ZNF707-201.alignment profile-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR017XHZ_ChIP_ZNF707_HepG2_ENCSR043MDP_profile_pattern_7.n_121-vs-ZNF707-201.alignment profile-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR017XHZ_ChIP_ZNF707_HepG2_ENCSR043MDP_profile_pattern_8.n_115-vs-ZNF707-201.alignment profile-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR017XHZ_ChIP_ZNF707_HepG2_ENCSR043MDP_profile_pattern_9.n_108-vs-ZNF707-201.alignment profile-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR077TKJ_ChIP_ZNF707_K562_ENCSR000RSZ_profile_pattern_0.n_1069-vs-ZNF707-201.alignment profile-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR077TKJ_ChIP_ZNF707_K562_ENCSR000RSZ_profile_pattern_10.n_84-vs-ZNF707-201.alignment profile-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR077TKJ_ChIP_ZNF707_K562_ENCSR000RSZ_profile_pattern_11.n_73-vs-ZNF707-201.alignment profile-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR077TKJ_ChIP_ZNF707_K562_ENCSR000RSZ_profile_pattern_12.n_71-vs-ZNF707-201.alignment profile-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR077TKJ_ChIP_ZNF707_K562_ENCSR000RSZ_profile_pattern_13.n_67-vs-ZNF707-201.alignment profile-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR077TKJ_ChIP_ZNF707_K562_ENCSR000RSZ_profile_pattern_14.n_47-vs-ZNF707-201.alignment profile-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR077TKJ_ChIP_ZNF707_K562_ENCSR000RSZ_profile_pattern_15.n_39-vs-ZNF707-201.alignment profile-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR077TKJ_ChIP_ZNF707_K562_ENCSR000RSZ_profile_pattern_16.n_26-vs-ZNF707-201.alignment profile-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR077TKJ_ChIP_ZNF707_K562_ENCSR000RSZ_profile_pattern_1.n_614-vs-ZNF707-201.alignment profile-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR077TKJ_ChIP_ZNF707_K562_ENCSR000RSZ_profile_pattern_2.n_436-vs-ZNF707-201.alignment profile-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR077TKJ_ChIP_ZNF707_K562_ENCSR000RSZ_profile_pattern_3.n_139-vs-ZNF707-201.alignment profile-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR077TKJ_ChIP_ZNF707_K562_ENCSR000RSZ_profile_pattern_4.n_122-vs-ZNF707-201.alignment profile-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR077TKJ_ChIP_ZNF707_K562_ENCSR000RSZ_profile_pattern_5.n_114-vs-ZNF707-201.alignment profile-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR077TKJ_ChIP_ZNF707_K562_ENCSR000RSZ_profile_pattern_6.n_113-vs-ZNF707-201.alignment profile-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR077TKJ_ChIP_ZNF707_K562_ENCSR000RSZ_profile_pattern_7.n_91-vs-ZNF707-201.alignment profile-znf_b1h_alignment/ZNF707-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF707-201/pos_patterns.ENCSR077TKJ_ChIP_ZNF707_K562_ENCSR000RSZ_profile_pattern_8.n_87-vs-ZNF707-201.alignment profile-znf_b1h_alignment/ZNF707-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/neg_patterns.ENCSR553QMC_ChIP_ZNF7_HepG2_ENCSR132EAW_profile_pattern_0.n_279-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/neg_patterns.ENCSR553QMC_ChIP_ZNF7_HepG2_ENCSR132EAW_profile_pattern_2.n_199-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/neg_patterns.ENCSR553QMC_ChIP_ZNF7_HepG2_ENCSR132EAW_profile_pattern_3.n_71-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/neg_patterns.ENCSR553QMC_ChIP_ZNF7_HepG2_ENCSR132EAW_profile_pattern_4.n_61-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/neg_patterns.ENCSR553QMC_ChIP_ZNF7_HepG2_ENCSR132EAW_profile_pattern_5.n_46-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/neg_patterns.ENCSR553QMC_ChIP_ZNF7_HepG2_ENCSR132EAW_profile_pattern_6.n_43-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/neg_patterns.ENCSR553QMC_ChIP_ZNF7_HepG2_ENCSR132EAW_profile_pattern_7.n_41-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/neg_patterns.ENCSR553QMC_ChIP_ZNF7_HepG2_ENCSR132EAW_profile_pattern_8.n_31-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_profile_pattern_0.n_3989-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_profile_pattern_10.n_204-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_profile_pattern_11.n_200-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_profile_pattern_12.n_192-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_profile_pattern_13.n_172-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_profile_pattern_14.n_154-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_profile_pattern_15.n_124-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_profile_pattern_16.n_87-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_profile_pattern_17.n_72-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_profile_pattern_18.n_63-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_profile_pattern_19.n_59-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_profile_pattern_1.n_3175-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_profile_pattern_20.n_53-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_profile_pattern_21.n_45-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_profile_pattern_22.n_36-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_profile_pattern_23.n_31-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_profile_pattern_24.n_26-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_profile_pattern_25.n_24-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_profile_pattern_26.n_22-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_profile_pattern_2.n_1618-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_profile_pattern_3.n_443-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_profile_pattern_4.n_415-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_profile_pattern_5.n_338-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_profile_pattern_6.n_333-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_profile_pattern_7.n_324-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_profile_pattern_8.n_280-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR454SCH_ChIP_ZNF7_K562_ENCSR633VZO_profile_pattern_9.n_207-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR553QMC_ChIP_ZNF7_HepG2_ENCSR132EAW_profile_pattern_0.n_5310-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR553QMC_ChIP_ZNF7_HepG2_ENCSR132EAW_profile_pattern_10.n_143-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR553QMC_ChIP_ZNF7_HepG2_ENCSR132EAW_profile_pattern_13.n_95-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR553QMC_ChIP_ZNF7_HepG2_ENCSR132EAW_profile_pattern_14.n_90-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR553QMC_ChIP_ZNF7_HepG2_ENCSR132EAW_profile_pattern_15.n_85-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR553QMC_ChIP_ZNF7_HepG2_ENCSR132EAW_profile_pattern_16.n_70-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR553QMC_ChIP_ZNF7_HepG2_ENCSR132EAW_profile_pattern_17.n_47-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR553QMC_ChIP_ZNF7_HepG2_ENCSR132EAW_profile_pattern_18.n_40-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR553QMC_ChIP_ZNF7_HepG2_ENCSR132EAW_profile_pattern_19.n_24-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR553QMC_ChIP_ZNF7_HepG2_ENCSR132EAW_profile_pattern_1.n_718-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR553QMC_ChIP_ZNF7_HepG2_ENCSR132EAW_profile_pattern_20.n_24-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR553QMC_ChIP_ZNF7_HepG2_ENCSR132EAW_profile_pattern_2.n_618-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR553QMC_ChIP_ZNF7_HepG2_ENCSR132EAW_profile_pattern_3.n_388-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR553QMC_ChIP_ZNF7_HepG2_ENCSR132EAW_profile_pattern_4.n_371-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR553QMC_ChIP_ZNF7_HepG2_ENCSR132EAW_profile_pattern_5.n_298-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR553QMC_ChIP_ZNF7_HepG2_ENCSR132EAW_profile_pattern_6.n_193-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR553QMC_ChIP_ZNF7_HepG2_ENCSR132EAW_profile_pattern_7.n_172-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR553QMC_ChIP_ZNF7_HepG2_ENCSR132EAW_profile_pattern_8.n_163-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF7-202/pos_patterns.ENCSR553QMC_ChIP_ZNF7_HepG2_ENCSR132EAW_profile_pattern_9.n_145-vs-ZNF7-202.alignment profile-znf_b1h_alignment/ZNF7-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF730-202/ChipExo_models_ZNF730_profile-pos.pattern_0.n_167-vs-ZNF730-202.alignment profile-znf_b1h_alignment/ZNF730-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF730-202/ChipExo_models_ZNF730_profile-pos.pattern_10.n_20-vs-ZNF730-202.alignment profile-znf_b1h_alignment/ZNF730-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF730-202/ChipExo_models_ZNF730_profile-pos.pattern_1.n_148-vs-ZNF730-202.alignment profile-znf_b1h_alignment/ZNF730-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF730-202/ChipExo_models_ZNF730_profile-pos.pattern_2.n_112-vs-ZNF730-202.alignment profile-znf_b1h_alignment/ZNF730-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF730-202/ChipExo_models_ZNF730_profile-pos.pattern_3.n_89-vs-ZNF730-202.alignment profile-znf_b1h_alignment/ZNF730-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF730-202/ChipExo_models_ZNF730_profile-pos.pattern_4.n_84-vs-ZNF730-202.alignment profile-znf_b1h_alignment/ZNF730-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF730-202/ChipExo_models_ZNF730_profile-pos.pattern_5.n_65-vs-ZNF730-202.alignment profile-znf_b1h_alignment/ZNF730-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF730-202/ChipExo_models_ZNF730_profile-pos.pattern_6.n_43-vs-ZNF730-202.alignment profile-znf_b1h_alignment/ZNF730-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF730-202/ChipExo_models_ZNF730_profile-pos.pattern_7.n_40-vs-ZNF730-202.alignment profile-znf_b1h_alignment/ZNF730-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF730-202/ChipExo_models_ZNF730_profile-pos.pattern_8.n_39-vs-ZNF730-202.alignment profile-znf_b1h_alignment/ZNF730-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF730-202/ChipExo_models_ZNF730_profile-pos.pattern_9.n_39-vs-ZNF730-202.alignment profile-znf_b1h_alignment/ZNF730-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF736-201/ChipExo_models_ZNF736_profile-pos.pattern_0.n_6358-vs-ZNF736-201.alignment profile-znf_b1h_alignment/ZNF736-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF736-201/ChipExo_models_ZNF736_profile-pos.pattern_1.n_440-vs-ZNF736-201.alignment profile-znf_b1h_alignment/ZNF736-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF736-201/ChipExo_models_ZNF736_profile-pos.pattern_2.n_342-vs-ZNF736-201.alignment profile-znf_b1h_alignment/ZNF736-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF736-201/ChipExo_models_ZNF736_profile-pos.pattern_3.n_278-vs-ZNF736-201.alignment profile-znf_b1h_alignment/ZNF736-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF736-201/ChipExo_models_ZNF736_profile-pos.pattern_4.n_190-vs-ZNF736-201.alignment profile-znf_b1h_alignment/ZNF736-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF736-201/ChipExo_models_ZNF736_profile-pos.pattern_5.n_172-vs-ZNF736-201.alignment profile-znf_b1h_alignment/ZNF736-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF736-201/ChipExo_models_ZNF736_profile-pos.pattern_6.n_129-vs-ZNF736-201.alignment profile-znf_b1h_alignment/ZNF736-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF736-201/ChipExo_models_ZNF736_profile-pos.pattern_7.n_97-vs-ZNF736-201.alignment profile-znf_b1h_alignment/ZNF736-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF736-201/ChipExo_models_ZNF736_profile-pos.pattern_8.n_54-vs-ZNF736-201.alignment profile-znf_b1h_alignment/ZNF736-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF736-201/ChipExo_models_ZNF736_profile-pos.pattern_9.n_30-vs-ZNF736-201.alignment profile-znf_b1h_alignment/ZNF736-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF737-201/ChipExo_models_ZNF737_profile-pos.pattern_0.n_42-vs-ZNF737-201.alignment profile-znf_b1h_alignment/ZNF737-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF737-201/ChipExo_models_ZNF737_profile-pos.pattern_1.n_28-vs-ZNF737-201.alignment profile-znf_b1h_alignment/ZNF737-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF737-201/neg_patterns.ENCSR127IHN_ChIP_ZNF737_HepG2_ENCSR042DVQ_profile_pattern_0.n_58-vs-ZNF737-201.alignment profile-znf_b1h_alignment/ZNF737-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF737-201/neg_patterns.ENCSR127IHN_ChIP_ZNF737_HepG2_ENCSR042DVQ_profile_pattern_1.n_49-vs-ZNF737-201.alignment profile-znf_b1h_alignment/ZNF737-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF737-201/neg_patterns.ENCSR127IHN_ChIP_ZNF737_HepG2_ENCSR042DVQ_profile_pattern_2.n_48-vs-ZNF737-201.alignment profile-znf_b1h_alignment/ZNF737-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF737-201/neg_patterns.ENCSR127IHN_ChIP_ZNF737_HepG2_ENCSR042DVQ_profile_pattern_3.n_40-vs-ZNF737-201.alignment profile-znf_b1h_alignment/ZNF737-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF737-201/neg_patterns.ENCSR127IHN_ChIP_ZNF737_HepG2_ENCSR042DVQ_profile_pattern_4.n_32-vs-ZNF737-201.alignment profile-znf_b1h_alignment/ZNF737-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF737-201/neg_patterns.ENCSR127IHN_ChIP_ZNF737_HepG2_ENCSR042DVQ_profile_pattern_5.n_29-vs-ZNF737-201.alignment profile-znf_b1h_alignment/ZNF737-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF737-201/neg_patterns.ENCSR127IHN_ChIP_ZNF737_HepG2_ENCSR042DVQ_profile_pattern_6.n_27-vs-ZNF737-201.alignment profile-znf_b1h_alignment/ZNF737-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF737-201/neg_patterns.ENCSR127IHN_ChIP_ZNF737_HepG2_ENCSR042DVQ_profile_pattern_7.n_21-vs-ZNF737-201.alignment profile-znf_b1h_alignment/ZNF737-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF737-201/pos_patterns.ENCSR127IHN_ChIP_ZNF737_HepG2_ENCSR042DVQ_profile_pattern_0.n_295-vs-ZNF737-201.alignment profile-znf_b1h_alignment/ZNF737-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF737-201/pos_patterns.ENCSR127IHN_ChIP_ZNF737_HepG2_ENCSR042DVQ_profile_pattern_10.n_104-vs-ZNF737-201.alignment profile-znf_b1h_alignment/ZNF737-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF737-201/pos_patterns.ENCSR127IHN_ChIP_ZNF737_HepG2_ENCSR042DVQ_profile_pattern_11.n_82-vs-ZNF737-201.alignment profile-znf_b1h_alignment/ZNF737-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF737-201/pos_patterns.ENCSR127IHN_ChIP_ZNF737_HepG2_ENCSR042DVQ_profile_pattern_12.n_80-vs-ZNF737-201.alignment profile-znf_b1h_alignment/ZNF737-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF737-201/pos_patterns.ENCSR127IHN_ChIP_ZNF737_HepG2_ENCSR042DVQ_profile_pattern_13.n_77-vs-ZNF737-201.alignment profile-znf_b1h_alignment/ZNF737-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF740-201/neg_patterns.ENCSR532EMP_ChIP_ZNF740_K562_ENCSR182PVT_profile_pattern_7.n_88-vs-ZNF740-201.alignment profile-znf_b1h_alignment/ZNF740-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF740-201/neg_patterns.ENCSR532EMP_ChIP_ZNF740_K562_ENCSR182PVT_profile_pattern_8.n_79-vs-ZNF740-201.alignment profile-znf_b1h_alignment/ZNF740-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF740-201/neg_patterns.ENCSR532EMP_ChIP_ZNF740_K562_ENCSR182PVT_profile_pattern_9.n_70-vs-ZNF740-201.alignment profile-znf_b1h_alignment/ZNF740-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF740-201/neg_patterns.ENCSR755ZAY_ChIP_ZNF740_HepG2_ENCSR726XMS_profile_pattern_0.n_34-vs-ZNF740-201.alignment profile-znf_b1h_alignment/ZNF740-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF740-201/neg_patterns.ENCSR755ZAY_ChIP_ZNF740_HepG2_ENCSR726XMS_profile_pattern_1.n_22-vs-ZNF740-201.alignment profile-znf_b1h_alignment/ZNF740-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF740-201/pos_patterns.ENCSR427XYP_ChIP_ZNF740_K562_ENCSR563SSN_profile_pattern_0.n_3999-vs-ZNF740-201.alignment profile-znf_b1h_alignment/ZNF740-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF740-201/pos_patterns.ENCSR427XYP_ChIP_ZNF740_K562_ENCSR563SSN_profile_pattern_10.n_97-vs-ZNF740-201.alignment profile-znf_b1h_alignment/ZNF740-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF764-201/pos_patterns.ENCSR023OOE_ChIP_ZNF764_K562_ENCSR116QAW_profile_pattern_3.n_149-vs-ZNF764-201.alignment profile-znf_b1h_alignment/ZNF764-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF764-201/pos_patterns.ENCSR023OOE_ChIP_ZNF764_K562_ENCSR116QAW_profile_pattern_4.n_120-vs-ZNF764-201.alignment profile-znf_b1h_alignment/ZNF764-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF764-201/pos_patterns.ENCSR023OOE_ChIP_ZNF764_K562_ENCSR116QAW_profile_pattern_5.n_118-vs-ZNF764-201.alignment profile-znf_b1h_alignment/ZNF764-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF764-201/pos_patterns.ENCSR023OOE_ChIP_ZNF764_K562_ENCSR116QAW_profile_pattern_6.n_114-vs-ZNF764-201.alignment profile-znf_b1h_alignment/ZNF764-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF764-201/pos_patterns.ENCSR023OOE_ChIP_ZNF764_K562_ENCSR116QAW_profile_pattern_7.n_105-vs-ZNF764-201.alignment profile-znf_b1h_alignment/ZNF764-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF764-201/pos_patterns.ENCSR023OOE_ChIP_ZNF764_K562_ENCSR116QAW_profile_pattern_8.n_76-vs-ZNF764-201.alignment profile-znf_b1h_alignment/ZNF764-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF764-201/pos_patterns.ENCSR023OOE_ChIP_ZNF764_K562_ENCSR116QAW_profile_pattern_9.n_70-vs-ZNF764-201.alignment profile-znf_b1h_alignment/ZNF764-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF765-201/ChipExo_models_ZNF765_profile-neg.pattern_0.n_46-vs-ZNF765-201.alignment profile-znf_b1h_alignment/ZNF765-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF765-201/ChipExo_models_ZNF765_profile-neg.pattern_1.n_23-vs-ZNF765-201.alignment profile-znf_b1h_alignment/ZNF765-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF765-201/ChipExo_models_ZNF765_profile-neg.pattern_2.n_23-vs-ZNF765-201.alignment profile-znf_b1h_alignment/ZNF765-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF765-201/ChipExo_models_ZNF765_profile-pos.pattern_0.n_3531-vs-ZNF765-201.alignment profile-znf_b1h_alignment/ZNF765-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF765-201/ChipExo_models_ZNF765_profile-pos.pattern_1.n_95-vs-ZNF765-201.alignment profile-znf_b1h_alignment/ZNF765-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF765-201/ChipExo_models_ZNF765_profile-pos.pattern_2.n_82-vs-ZNF765-201.alignment profile-znf_b1h_alignment/ZNF765-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF765-201/ChipExo_models_ZNF765_profile-pos.pattern_3.n_69-vs-ZNF765-201.alignment profile-znf_b1h_alignment/ZNF765-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/ChipExo_models_ZNF766_profile-pos.pattern_0.n_9871-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/ChipExo_models_ZNF766_profile-pos.pattern_1.n_83-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/ChipExo_models_ZNF766_profile-pos.pattern_2.n_68-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/ChipExo_models_ZNF766_profile-pos.pattern_3.n_61-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/ChipExo_models_ZNF766_profile-pos.pattern_4.n_40-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/neg_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_profile_pattern_0.n_828-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/neg_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_profile_pattern_10.n_59-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/neg_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_profile_pattern_11.n_42-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/neg_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_profile_pattern_12.n_40-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/neg_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_profile_pattern_13.n_36-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/neg_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_profile_pattern_14.n_28-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/neg_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_profile_pattern_1.n_644-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/neg_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_profile_pattern_2.n_241-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/neg_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_profile_pattern_3.n_214-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/neg_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_profile_pattern_4.n_192-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/neg_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_profile_pattern_5.n_168-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/neg_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_profile_pattern_6.n_144-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/neg_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_profile_pattern_7.n_76-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/neg_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_profile_pattern_8.n_74-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/neg_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_profile_pattern_9.n_68-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/neg_patterns.ENCSR869RSW_ChIP_ZNF766_HepG2_ENCSR220OPP_profile_pattern_0.n_73-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/neg_patterns.ENCSR869RSW_ChIP_ZNF766_HepG2_ENCSR220OPP_profile_pattern_1.n_73-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/neg_patterns.ENCSR869RSW_ChIP_ZNF766_HepG2_ENCSR220OPP_profile_pattern_2.n_63-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/neg_patterns.ENCSR869RSW_ChIP_ZNF766_HepG2_ENCSR220OPP_profile_pattern_3.n_51-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/neg_patterns.ENCSR869RSW_ChIP_ZNF766_HepG2_ENCSR220OPP_profile_pattern_4.n_42-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/neg_patterns.ENCSR869RSW_ChIP_ZNF766_HepG2_ENCSR220OPP_profile_pattern_5.n_37-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/neg_patterns.ENCSR869RSW_ChIP_ZNF766_HepG2_ENCSR220OPP_profile_pattern_6.n_32-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/neg_patterns.ENCSR869RSW_ChIP_ZNF766_HepG2_ENCSR220OPP_profile_pattern_7.n_27-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/neg_patterns.ENCSR869RSW_ChIP_ZNF766_HepG2_ENCSR220OPP_profile_pattern_8.n_22-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_profile_pattern_0.n_8896-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_profile_pattern_10.n_671-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_profile_pattern_11.n_534-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_profile_pattern_12.n_529-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_profile_pattern_13.n_504-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_profile_pattern_14.n_416-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_profile_pattern_15.n_281-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_profile_pattern_16.n_275-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_profile_pattern_17.n_262-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_profile_pattern_18.n_228-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_profile_pattern_19.n_212-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_profile_pattern_1.n_5830-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_profile_pattern_20.n_209-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_profile_pattern_21.n_196-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR194IJN_ChIP_ZNF766_K562_ENCSR030UBN_profile_pattern_22.n_82-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR869RSW_ChIP_ZNF766_HepG2_ENCSR220OPP_profile_pattern_16.n_55-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR869RSW_ChIP_ZNF766_HepG2_ENCSR220OPP_profile_pattern_17.n_37-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR869RSW_ChIP_ZNF766_HepG2_ENCSR220OPP_profile_pattern_18.n_29-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR869RSW_ChIP_ZNF766_HepG2_ENCSR220OPP_profile_pattern_1.n_1206-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR869RSW_ChIP_ZNF766_HepG2_ENCSR220OPP_profile_pattern_2.n_950-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR869RSW_ChIP_ZNF766_HepG2_ENCSR220OPP_profile_pattern_3.n_511-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR869RSW_ChIP_ZNF766_HepG2_ENCSR220OPP_profile_pattern_4.n_378-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR869RSW_ChIP_ZNF766_HepG2_ENCSR220OPP_profile_pattern_5.n_296-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR869RSW_ChIP_ZNF766_HepG2_ENCSR220OPP_profile_pattern_6.n_291-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR869RSW_ChIP_ZNF766_HepG2_ENCSR220OPP_profile_pattern_7.n_243-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR869RSW_ChIP_ZNF766_HepG2_ENCSR220OPP_profile_pattern_8.n_219-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF766-201/pos_patterns.ENCSR869RSW_ChIP_ZNF766_HepG2_ENCSR220OPP_profile_pattern_9.n_206-vs-ZNF766-201.alignment profile-znf_b1h_alignment/ZNF766-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF768-201/Hughes_GR_models_ZNF768_profile-pos.pattern_0.n_1794-vs-ZNF768-201.alignment profile-znf_b1h_alignment/ZNF768-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF768-201/Hughes_GR_models_ZNF768_profile-pos.pattern_1.n_1678-vs-ZNF768-201.alignment profile-znf_b1h_alignment/ZNF768-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/Hughes_GR_models_ZNF770_profile-neg.pattern_0.n_47-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/Hughes_GR_models_ZNF770_profile-pos.pattern_0.n_10315-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/Hughes_GR_models_ZNF770_profile-pos.pattern_10.n_168-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/Hughes_GR_models_ZNF770_profile-pos.pattern_11.n_145-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/Hughes_GR_models_ZNF770_profile-pos.pattern_12.n_129-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/Hughes_GR_models_ZNF770_profile-pos.pattern_13.n_120-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/Hughes_GR_models_ZNF770_profile-pos.pattern_14.n_113-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/Hughes_GR_models_ZNF770_profile-pos.pattern_15.n_86-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/Hughes_GR_models_ZNF770_profile-pos.pattern_16.n_78-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/Hughes_GR_models_ZNF770_profile-pos.pattern_17.n_73-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/Hughes_GR_models_ZNF770_profile-pos.pattern_18.n_73-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/Hughes_GR_models_ZNF770_profile-pos.pattern_19.n_51-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/Hughes_GR_models_ZNF770_profile-pos.pattern_1.n_9037-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/Hughes_GR_models_ZNF770_profile-pos.pattern_21.n_41-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/Hughes_GR_models_ZNF770_profile-pos.pattern_2.n_1844-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/Hughes_GR_models_ZNF770_profile-pos.pattern_3.n_1345-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/Hughes_GR_models_ZNF770_profile-pos.pattern_4.n_369-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/Hughes_GR_models_ZNF770_profile-pos.pattern_6.n_228-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/neg_patterns.ENCSR242BGR_ChIP_ZNF770_HEK293_ENCSR055REJ_profile_pattern_7.n_216-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/neg_patterns.ENCSR242BGR_ChIP_ZNF770_HEK293_ENCSR055REJ_profile_pattern_9.n_201-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/neg_patterns.ENCSR510GKB_ChIP_ZNF770_HepG2_ENCSR032AHU_profile_pattern_0.n_4198-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/neg_patterns.ENCSR510GKB_ChIP_ZNF770_HepG2_ENCSR032AHU_profile_pattern_10.n_124-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/neg_patterns.ENCSR510GKB_ChIP_ZNF770_HepG2_ENCSR032AHU_profile_pattern_11.n_96-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/neg_patterns.ENCSR510GKB_ChIP_ZNF770_HepG2_ENCSR032AHU_profile_pattern_12.n_86-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/neg_patterns.ENCSR510GKB_ChIP_ZNF770_HepG2_ENCSR032AHU_profile_pattern_13.n_53-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/neg_patterns.ENCSR510GKB_ChIP_ZNF770_HepG2_ENCSR032AHU_profile_pattern_1.n_2013-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/neg_patterns.ENCSR510GKB_ChIP_ZNF770_HepG2_ENCSR032AHU_profile_pattern_2.n_1558-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/neg_patterns.ENCSR510GKB_ChIP_ZNF770_HepG2_ENCSR032AHU_profile_pattern_3.n_1366-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/neg_patterns.ENCSR510GKB_ChIP_ZNF770_HepG2_ENCSR032AHU_profile_pattern_4.n_486-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/neg_patterns.ENCSR510GKB_ChIP_ZNF770_HepG2_ENCSR032AHU_profile_pattern_5.n_404-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/neg_patterns.ENCSR510GKB_ChIP_ZNF770_HepG2_ENCSR032AHU_profile_pattern_6.n_404-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/neg_patterns.ENCSR510GKB_ChIP_ZNF770_HepG2_ENCSR032AHU_profile_pattern_7.n_390-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/neg_patterns.ENCSR510GKB_ChIP_ZNF770_HepG2_ENCSR032AHU_profile_pattern_8.n_356-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/neg_patterns.ENCSR510GKB_ChIP_ZNF770_HepG2_ENCSR032AHU_profile_pattern_9.n_329-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR242BGR_ChIP_ZNF770_HEK293_ENCSR055REJ_profile_pattern_0.n_10662-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR242BGR_ChIP_ZNF770_HEK293_ENCSR055REJ_profile_pattern_10.n_132-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR242BGR_ChIP_ZNF770_HEK293_ENCSR055REJ_profile_pattern_11.n_122-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR242BGR_ChIP_ZNF770_HEK293_ENCSR055REJ_profile_pattern_12.n_116-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR242BGR_ChIP_ZNF770_HEK293_ENCSR055REJ_profile_pattern_13.n_107-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR242BGR_ChIP_ZNF770_HEK293_ENCSR055REJ_profile_pattern_14.n_91-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR242BGR_ChIP_ZNF770_HEK293_ENCSR055REJ_profile_pattern_15.n_75-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR242BGR_ChIP_ZNF770_HEK293_ENCSR055REJ_profile_pattern_16.n_68-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR242BGR_ChIP_ZNF770_HEK293_ENCSR055REJ_profile_pattern_17.n_44-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR242BGR_ChIP_ZNF770_HEK293_ENCSR055REJ_profile_pattern_18.n_41-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR242BGR_ChIP_ZNF770_HEK293_ENCSR055REJ_profile_pattern_19.n_40-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR242BGR_ChIP_ZNF770_HEK293_ENCSR055REJ_profile_pattern_1.n_9723-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR242BGR_ChIP_ZNF770_HEK293_ENCSR055REJ_profile_pattern_20.n_34-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR242BGR_ChIP_ZNF770_HEK293_ENCSR055REJ_profile_pattern_21.n_32-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR242BGR_ChIP_ZNF770_HEK293_ENCSR055REJ_profile_pattern_22.n_27-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR242BGR_ChIP_ZNF770_HEK293_ENCSR055REJ_profile_pattern_23.n_23-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF770-201/pos_patterns.ENCSR242BGR_ChIP_ZNF770_HEK293_ENCSR055REJ_profile_pattern_3.n_1300-vs-ZNF770-201.alignment profile-znf_b1h_alignment/ZNF770-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF77-201/pos_patterns.ENCSR844MAB_ChIP_ZNF77_K562_ENCSR381SNK_profile_pattern_0.n_185-vs-ZNF77-201.alignment profile-znf_b1h_alignment/ZNF77-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF77-201/pos_patterns.ENCSR844MAB_ChIP_ZNF77_K562_ENCSR381SNK_profile_pattern_1.n_145-vs-ZNF77-201.alignment profile-znf_b1h_alignment/ZNF77-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF77-201/pos_patterns.ENCSR844MAB_ChIP_ZNF77_K562_ENCSR381SNK_profile_pattern_2.n_117-vs-ZNF77-201.alignment profile-znf_b1h_alignment/ZNF77-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF77-201/pos_patterns.ENCSR844MAB_ChIP_ZNF77_K562_ENCSR381SNK_profile_pattern_3.n_65-vs-ZNF77-201.alignment profile-znf_b1h_alignment/ZNF77-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF77-201/pos_patterns.ENCSR844MAB_ChIP_ZNF77_K562_ENCSR381SNK_profile_pattern_4.n_36-vs-ZNF77-201.alignment profile-znf_b1h_alignment/ZNF77-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF77-201/pos_patterns.ENCSR844MAB_ChIP_ZNF77_K562_ENCSR381SNK_profile_pattern_5.n_36-vs-ZNF77-201.alignment profile-znf_b1h_alignment/ZNF77-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF77-201/pos_patterns.ENCSR844MAB_ChIP_ZNF77_K562_ENCSR381SNK_profile_pattern_6.n_31-vs-ZNF77-201.alignment profile-znf_b1h_alignment/ZNF77-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF77-201/pos_patterns.ENCSR844MAB_ChIP_ZNF77_K562_ENCSR381SNK_profile_pattern_7.n_27-vs-ZNF77-201.alignment profile-znf_b1h_alignment/ZNF77-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF77-201/pos_patterns.ENCSR844MAB_ChIP_ZNF77_K562_ENCSR381SNK_profile_pattern_8.n_22-vs-ZNF77-201.alignment profile-znf_b1h_alignment/ZNF77-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF772-201/neg_patterns.ENCSR248WAU_ChIP_ZNF772_HepG2_ENCSR926XBA_profile_pattern_0.n_60-vs-ZNF772-201.alignment profile-znf_b1h_alignment/ZNF772-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF772-201/neg_patterns.ENCSR248WAU_ChIP_ZNF772_HepG2_ENCSR926XBA_profile_pattern_1.n_53-vs-ZNF772-201.alignment profile-znf_b1h_alignment/ZNF772-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF772-201/neg_patterns.ENCSR248WAU_ChIP_ZNF772_HepG2_ENCSR926XBA_profile_pattern_2.n_50-vs-ZNF772-201.alignment profile-znf_b1h_alignment/ZNF772-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF772-201/neg_patterns.ENCSR248WAU_ChIP_ZNF772_HepG2_ENCSR926XBA_profile_pattern_3.n_38-vs-ZNF772-201.alignment profile-znf_b1h_alignment/ZNF772-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF772-201/neg_patterns.ENCSR248WAU_ChIP_ZNF772_HepG2_ENCSR926XBA_profile_pattern_4.n_37-vs-ZNF772-201.alignment profile-znf_b1h_alignment/ZNF772-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF772-201/neg_patterns.ENCSR248WAU_ChIP_ZNF772_HepG2_ENCSR926XBA_profile_pattern_5.n_34-vs-ZNF772-201.alignment profile-znf_b1h_alignment/ZNF772-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF772-201/neg_patterns.ENCSR248WAU_ChIP_ZNF772_HepG2_ENCSR926XBA_profile_pattern_6.n_32-vs-ZNF772-201.alignment profile-znf_b1h_alignment/ZNF772-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF772-201/neg_patterns.ENCSR248WAU_ChIP_ZNF772_HepG2_ENCSR926XBA_profile_pattern_7.n_26-vs-ZNF772-201.alignment profile-znf_b1h_alignment/ZNF772-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF772-201/pos_patterns.ENCSR248WAU_ChIP_ZNF772_HepG2_ENCSR926XBA_profile_pattern_0.n_2473-vs-ZNF772-201.alignment profile-znf_b1h_alignment/ZNF772-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF772-201/pos_patterns.ENCSR248WAU_ChIP_ZNF772_HepG2_ENCSR926XBA_profile_pattern_10.n_383-vs-ZNF772-201.alignment profile-znf_b1h_alignment/ZNF772-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF772-201/pos_patterns.ENCSR248WAU_ChIP_ZNF772_HepG2_ENCSR926XBA_profile_pattern_12.n_352-vs-ZNF772-201.alignment profile-znf_b1h_alignment/ZNF772-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF772-201/pos_patterns.ENCSR248WAU_ChIP_ZNF772_HepG2_ENCSR926XBA_profile_pattern_13.n_312-vs-ZNF772-201.alignment profile-znf_b1h_alignment/ZNF772-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF772-201/pos_patterns.ENCSR248WAU_ChIP_ZNF772_HepG2_ENCSR926XBA_profile_pattern_16.n_175-vs-ZNF772-201.alignment profile-znf_b1h_alignment/ZNF772-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF773-201/pos_patterns.ENCSR029ARE_ChIP_ZNF773_HepG2_ENCSR349ZFV_profile_pattern_11.n_82-vs-ZNF773-201.alignment profile-znf_b1h_alignment/ZNF773-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF773-201/pos_patterns.ENCSR029ARE_ChIP_ZNF773_HepG2_ENCSR349ZFV_profile_pattern_13.n_44-vs-ZNF773-201.alignment profile-znf_b1h_alignment/ZNF773-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF773-201/pos_patterns.ENCSR029ARE_ChIP_ZNF773_HepG2_ENCSR349ZFV_profile_pattern_15.n_29-vs-ZNF773-201.alignment profile-znf_b1h_alignment/ZNF773-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF773-201/pos_patterns.ENCSR029ARE_ChIP_ZNF773_HepG2_ENCSR349ZFV_profile_pattern_16.n_21-vs-ZNF773-201.alignment profile-znf_b1h_alignment/ZNF773-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF773-201/pos_patterns.ENCSR029ARE_ChIP_ZNF773_HepG2_ENCSR349ZFV_profile_pattern_1.n_483-vs-ZNF773-201.alignment profile-znf_b1h_alignment/ZNF773-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF773-201/pos_patterns.ENCSR029ARE_ChIP_ZNF773_HepG2_ENCSR349ZFV_profile_pattern_2.n_455-vs-ZNF773-201.alignment profile-znf_b1h_alignment/ZNF773-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF773-201/pos_patterns.ENCSR029ARE_ChIP_ZNF773_HepG2_ENCSR349ZFV_profile_pattern_3.n_323-vs-ZNF773-201.alignment profile-znf_b1h_alignment/ZNF773-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF773-201/pos_patterns.ENCSR029ARE_ChIP_ZNF773_HepG2_ENCSR349ZFV_profile_pattern_4.n_283-vs-ZNF773-201.alignment profile-znf_b1h_alignment/ZNF773-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF773-201/pos_patterns.ENCSR029ARE_ChIP_ZNF773_HepG2_ENCSR349ZFV_profile_pattern_5.n_235-vs-ZNF773-201.alignment profile-znf_b1h_alignment/ZNF773-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF773-201/pos_patterns.ENCSR029ARE_ChIP_ZNF773_HepG2_ENCSR349ZFV_profile_pattern_6.n_232-vs-ZNF773-201.alignment profile-znf_b1h_alignment/ZNF773-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF773-201/pos_patterns.ENCSR029ARE_ChIP_ZNF773_HepG2_ENCSR349ZFV_profile_pattern_7.n_144-vs-ZNF773-201.alignment profile-znf_b1h_alignment/ZNF773-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF773-201/pos_patterns.ENCSR029ARE_ChIP_ZNF773_HepG2_ENCSR349ZFV_profile_pattern_8.n_143-vs-ZNF773-201.alignment profile-znf_b1h_alignment/ZNF773-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF773-201/pos_patterns.ENCSR029ARE_ChIP_ZNF773_HepG2_ENCSR349ZFV_profile_pattern_9.n_124-vs-ZNF773-201.alignment profile-znf_b1h_alignment/ZNF773-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF775-201/neg_patterns.ENCSR856QJP_ChIP_ZNF775_HepG2_ENCSR171FDR_profile_pattern_0.n_37-vs-ZNF775-201.alignment profile-znf_b1h_alignment/ZNF775-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF775-201/neg_patterns.ENCSR856QJP_ChIP_ZNF775_HepG2_ENCSR171FDR_profile_pattern_1.n_32-vs-ZNF775-201.alignment profile-znf_b1h_alignment/ZNF775-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF775-201/neg_patterns.ENCSR856QJP_ChIP_ZNF775_HepG2_ENCSR171FDR_profile_pattern_2.n_26-vs-ZNF775-201.alignment profile-znf_b1h_alignment/ZNF775-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF775-201/neg_patterns.ENCSR856QJP_ChIP_ZNF775_HepG2_ENCSR171FDR_profile_pattern_3.n_24-vs-ZNF775-201.alignment profile-znf_b1h_alignment/ZNF775-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF775-201/neg_patterns.ENCSR856QJP_ChIP_ZNF775_HepG2_ENCSR171FDR_profile_pattern_4.n_23-vs-ZNF775-201.alignment profile-znf_b1h_alignment/ZNF775-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF775-201/neg_patterns.ENCSR856QJP_ChIP_ZNF775_HepG2_ENCSR171FDR_profile_pattern_5.n_23-vs-ZNF775-201.alignment profile-znf_b1h_alignment/ZNF775-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF775-201/neg_patterns.ENCSR856QJP_ChIP_ZNF775_HepG2_ENCSR171FDR_profile_pattern_6.n_22-vs-ZNF775-201.alignment profile-znf_b1h_alignment/ZNF775-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF775-201/pos_patterns.ENCSR856QJP_ChIP_ZNF775_HepG2_ENCSR171FDR_profile_pattern_0.n_1125-vs-ZNF775-201.alignment profile-znf_b1h_alignment/ZNF775-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF775-201/pos_patterns.ENCSR856QJP_ChIP_ZNF775_HepG2_ENCSR171FDR_profile_pattern_10.n_137-vs-ZNF775-201.alignment profile-znf_b1h_alignment/ZNF775-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF775-201/pos_patterns.ENCSR856QJP_ChIP_ZNF775_HepG2_ENCSR171FDR_profile_pattern_11.n_132-vs-ZNF775-201.alignment profile-znf_b1h_alignment/ZNF775-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF775-201/pos_patterns.ENCSR856QJP_ChIP_ZNF775_HepG2_ENCSR171FDR_profile_pattern_12.n_107-vs-ZNF775-201.alignment profile-znf_b1h_alignment/ZNF775-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF775-201/pos_patterns.ENCSR856QJP_ChIP_ZNF775_HepG2_ENCSR171FDR_profile_pattern_13.n_107-vs-ZNF775-201.alignment profile-znf_b1h_alignment/ZNF775-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF775-201/pos_patterns.ENCSR856QJP_ChIP_ZNF775_HepG2_ENCSR171FDR_profile_pattern_14.n_86-vs-ZNF775-201.alignment profile-znf_b1h_alignment/ZNF775-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF775-201/pos_patterns.ENCSR856QJP_ChIP_ZNF775_HepG2_ENCSR171FDR_profile_pattern_15.n_74-vs-ZNF775-201.alignment profile-znf_b1h_alignment/ZNF775-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF775-201/pos_patterns.ENCSR856QJP_ChIP_ZNF775_HepG2_ENCSR171FDR_profile_pattern_16.n_66-vs-ZNF775-201.alignment profile-znf_b1h_alignment/ZNF775-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF775-201/pos_patterns.ENCSR856QJP_ChIP_ZNF775_HepG2_ENCSR171FDR_profile_pattern_17.n_58-vs-ZNF775-201.alignment profile-znf_b1h_alignment/ZNF775-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF775-201/pos_patterns.ENCSR856QJP_ChIP_ZNF775_HepG2_ENCSR171FDR_profile_pattern_18.n_46-vs-ZNF775-201.alignment profile-znf_b1h_alignment/ZNF775-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF775-201/pos_patterns.ENCSR856QJP_ChIP_ZNF775_HepG2_ENCSR171FDR_profile_pattern_19.n_29-vs-ZNF775-201.alignment profile-znf_b1h_alignment/ZNF775-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF775-201/pos_patterns.ENCSR856QJP_ChIP_ZNF775_HepG2_ENCSR171FDR_profile_pattern_1.n_685-vs-ZNF775-201.alignment profile-znf_b1h_alignment/ZNF775-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF775-201/pos_patterns.ENCSR856QJP_ChIP_ZNF775_HepG2_ENCSR171FDR_profile_pattern_20.n_23-vs-ZNF775-201.alignment profile-znf_b1h_alignment/ZNF775-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF775-201/pos_patterns.ENCSR856QJP_ChIP_ZNF775_HepG2_ENCSR171FDR_profile_pattern_21.n_22-vs-ZNF775-201.alignment profile-znf_b1h_alignment/ZNF775-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF775-201/pos_patterns.ENCSR856QJP_ChIP_ZNF775_HepG2_ENCSR171FDR_profile_pattern_2.n_289-vs-ZNF775-201.alignment profile-znf_b1h_alignment/ZNF775-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF775-201/pos_patterns.ENCSR856QJP_ChIP_ZNF775_HepG2_ENCSR171FDR_profile_pattern_3.n_270-vs-ZNF775-201.alignment profile-znf_b1h_alignment/ZNF775-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF775-201/pos_patterns.ENCSR856QJP_ChIP_ZNF775_HepG2_ENCSR171FDR_profile_pattern_4.n_233-vs-ZNF775-201.alignment profile-znf_b1h_alignment/ZNF775-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF775-201/pos_patterns.ENCSR856QJP_ChIP_ZNF775_HepG2_ENCSR171FDR_profile_pattern_7.n_180-vs-ZNF775-201.alignment profile-znf_b1h_alignment/ZNF775-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF775-201/pos_patterns.ENCSR856QJP_ChIP_ZNF775_HepG2_ENCSR171FDR_profile_pattern_9.n_150-vs-ZNF775-201.alignment profile-znf_b1h_alignment/ZNF775-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF776-201/ChipExo_models_ZNF776_profile-pos.pattern_0.n_378-vs-ZNF776-201.alignment profile-znf_b1h_alignment/ZNF776-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF776-201/pos_patterns.ENCSR274LVQ_ChIP_ZNF776_HEK293_ENCSR678WHB_profile_pattern_2.n_84-vs-ZNF776-201.alignment profile-znf_b1h_alignment/ZNF776-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF776-201/pos_patterns.ENCSR274LVQ_ChIP_ZNF776_HEK293_ENCSR678WHB_profile_pattern_3.n_77-vs-ZNF776-201.alignment profile-znf_b1h_alignment/ZNF776-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF776-201/pos_patterns.ENCSR274LVQ_ChIP_ZNF776_HEK293_ENCSR678WHB_profile_pattern_4.n_60-vs-ZNF776-201.alignment profile-znf_b1h_alignment/ZNF776-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF776-201/pos_patterns.ENCSR274LVQ_ChIP_ZNF776_HEK293_ENCSR678WHB_profile_pattern_5.n_60-vs-ZNF776-201.alignment profile-znf_b1h_alignment/ZNF776-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF776-201/pos_patterns.ENCSR274LVQ_ChIP_ZNF776_HEK293_ENCSR678WHB_profile_pattern_6.n_25-vs-ZNF776-201.alignment profile-znf_b1h_alignment/ZNF776-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF776-201/pos_patterns.ENCSR704ENT_ChIP_ZNF776_HepG2_ENCSR113NLK_profile_pattern_0.n_1668-vs-ZNF776-201.alignment profile-znf_b1h_alignment/ZNF776-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF776-201/pos_patterns.ENCSR704ENT_ChIP_ZNF776_HepG2_ENCSR113NLK_profile_pattern_10.n_66-vs-ZNF776-201.alignment profile-znf_b1h_alignment/ZNF776-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF776-201/pos_patterns.ENCSR704ENT_ChIP_ZNF776_HepG2_ENCSR113NLK_profile_pattern_11.n_65-vs-ZNF776-201.alignment profile-znf_b1h_alignment/ZNF776-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF776-201/pos_patterns.ENCSR704ENT_ChIP_ZNF776_HepG2_ENCSR113NLK_profile_pattern_12.n_34-vs-ZNF776-201.alignment profile-znf_b1h_alignment/ZNF776-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF776-201/pos_patterns.ENCSR704ENT_ChIP_ZNF776_HepG2_ENCSR113NLK_profile_pattern_13.n_25-vs-ZNF776-201.alignment profile-znf_b1h_alignment/ZNF776-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF776-201/pos_patterns.ENCSR704ENT_ChIP_ZNF776_HepG2_ENCSR113NLK_profile_pattern_1.n_1652-vs-ZNF776-201.alignment profile-znf_b1h_alignment/ZNF776-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF776-201/pos_patterns.ENCSR704ENT_ChIP_ZNF776_HepG2_ENCSR113NLK_profile_pattern_2.n_1474-vs-ZNF776-201.alignment profile-znf_b1h_alignment/ZNF776-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF776-201/pos_patterns.ENCSR704ENT_ChIP_ZNF776_HepG2_ENCSR113NLK_profile_pattern_3.n_1294-vs-ZNF776-201.alignment profile-znf_b1h_alignment/ZNF776-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF776-201/pos_patterns.ENCSR704ENT_ChIP_ZNF776_HepG2_ENCSR113NLK_profile_pattern_4.n_1162-vs-ZNF776-201.alignment profile-znf_b1h_alignment/ZNF776-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF776-201/pos_patterns.ENCSR704ENT_ChIP_ZNF776_HepG2_ENCSR113NLK_profile_pattern_5.n_485-vs-ZNF776-201.alignment profile-znf_b1h_alignment/ZNF776-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF776-201/pos_patterns.ENCSR704ENT_ChIP_ZNF776_HepG2_ENCSR113NLK_profile_pattern_6.n_432-vs-ZNF776-201.alignment profile-znf_b1h_alignment/ZNF776-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF776-201/pos_patterns.ENCSR704ENT_ChIP_ZNF776_HepG2_ENCSR113NLK_profile_pattern_7.n_179-vs-ZNF776-201.alignment profile-znf_b1h_alignment/ZNF776-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF776-201/pos_patterns.ENCSR704ENT_ChIP_ZNF776_HepG2_ENCSR113NLK_profile_pattern_8.n_111-vs-ZNF776-201.alignment profile-znf_b1h_alignment/ZNF776-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF776-201/pos_patterns.ENCSR704ENT_ChIP_ZNF776_HepG2_ENCSR113NLK_profile_pattern_9.n_75-vs-ZNF776-201.alignment profile-znf_b1h_alignment/ZNF776-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF777-201/ChipExo_models_ZNF777_profile-neg.pattern_0.n_51-vs-ZNF777-201.alignment profile-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF777-201/ChipExo_models_ZNF777_profile-neg.pattern_1.n_42-vs-ZNF777-201.alignment profile-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF777-201/ChipExo_models_ZNF777_profile-pos.pattern_0.n_343-vs-ZNF777-201.alignment profile-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF777-201/ChipExo_models_ZNF777_profile-pos.pattern_10.n_30-vs-ZNF777-201.alignment profile-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF777-201/ChipExo_models_ZNF777_profile-pos.pattern_11.n_30-vs-ZNF777-201.alignment profile-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF777-201/ChipExo_models_ZNF777_profile-pos.pattern_1.n_192-vs-ZNF777-201.alignment profile-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF777-201/ChipExo_models_ZNF777_profile-pos.pattern_2.n_134-vs-ZNF777-201.alignment profile-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF777-201/ChipExo_models_ZNF777_profile-pos.pattern_3.n_108-vs-ZNF777-201.alignment profile-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF777-201/ChipExo_models_ZNF777_profile-pos.pattern_4.n_87-vs-ZNF777-201.alignment profile-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF777-201/ChipExo_models_ZNF777_profile-pos.pattern_5.n_75-vs-ZNF777-201.alignment profile-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF777-201/ChipExo_models_ZNF777_profile-pos.pattern_6.n_74-vs-ZNF777-201.alignment profile-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF777-201/ChipExo_models_ZNF777_profile-pos.pattern_7.n_67-vs-ZNF777-201.alignment profile-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF777-201/ChipExo_models_ZNF777_profile-pos.pattern_8.n_62-vs-ZNF777-201.alignment profile-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF777-201/ChipExo_models_ZNF777_profile-pos.pattern_9.n_34-vs-ZNF777-201.alignment profile-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF777-201/neg_patterns.ENCSR068ZQR_ChIP_ZNF777_HepG2_ENCSR759UUU_profile_pattern_0.n_55-vs-ZNF777-201.alignment profile-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF777-201/neg_patterns.ENCSR068ZQR_ChIP_ZNF777_HepG2_ENCSR759UUU_profile_pattern_1.n_35-vs-ZNF777-201.alignment profile-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF777-201/neg_patterns.ENCSR068ZQR_ChIP_ZNF777_HepG2_ENCSR759UUU_profile_pattern_2.n_25-vs-ZNF777-201.alignment profile-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF777-201/neg_patterns.ENCSR068ZQR_ChIP_ZNF777_HepG2_ENCSR759UUU_profile_pattern_3.n_24-vs-ZNF777-201.alignment profile-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF777-201/neg_patterns.ENCSR295BIP_ChIP_ZNF777_HEK293_ENCSR166JMV_profile_pattern_0.n_23-vs-ZNF777-201.alignment profile-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF777-201/neg_patterns.ENCSR295BIP_ChIP_ZNF777_HEK293_ENCSR166JMV_profile_pattern_1.n_21-vs-ZNF777-201.alignment profile-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR068ZQR_ChIP_ZNF777_HepG2_ENCSR759UUU_profile_pattern_0.n_9004-vs-ZNF777-201.alignment profile-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR068ZQR_ChIP_ZNF777_HepG2_ENCSR759UUU_profile_pattern_10.n_51-vs-ZNF777-201.alignment profile-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR068ZQR_ChIP_ZNF777_HepG2_ENCSR759UUU_profile_pattern_11.n_48-vs-ZNF777-201.alignment profile-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR068ZQR_ChIP_ZNF777_HepG2_ENCSR759UUU_profile_pattern_12.n_33-vs-ZNF777-201.alignment profile-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR068ZQR_ChIP_ZNF777_HepG2_ENCSR759UUU_profile_pattern_13.n_24-vs-ZNF777-201.alignment profile-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR068ZQR_ChIP_ZNF777_HepG2_ENCSR759UUU_profile_pattern_1.n_1805-vs-ZNF777-201.alignment profile-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR068ZQR_ChIP_ZNF777_HepG2_ENCSR759UUU_profile_pattern_2.n_1308-vs-ZNF777-201.alignment profile-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR068ZQR_ChIP_ZNF777_HepG2_ENCSR759UUU_profile_pattern_3.n_395-vs-ZNF777-201.alignment profile-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR068ZQR_ChIP_ZNF777_HepG2_ENCSR759UUU_profile_pattern_4.n_299-vs-ZNF777-201.alignment profile-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR068ZQR_ChIP_ZNF777_HepG2_ENCSR759UUU_profile_pattern_5.n_249-vs-ZNF777-201.alignment profile-znf_b1h_alignment/ZNF777-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR068ZQR_ChIP_ZNF777_HepG2_ENCSR759UUU_profile_pattern_7.n_103-vs-ZNF777-201.alignment profile-znf_b1h_alignment/ZNF777-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR068ZQR_ChIP_ZNF777_HepG2_ENCSR759UUU_profile_pattern_9.n_91-vs-ZNF777-201.alignment profile-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR295BIP_ChIP_ZNF777_HEK293_ENCSR166JMV_profile_pattern_0.n_1742-vs-ZNF777-201.alignment profile-znf_b1h_alignment/ZNF777-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR295BIP_ChIP_ZNF777_HEK293_ENCSR166JMV_profile_pattern_2.n_266-vs-ZNF777-201.alignment profile-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR295BIP_ChIP_ZNF777_HEK293_ENCSR166JMV_profile_pattern_3.n_209-vs-ZNF777-201.alignment profile-znf_b1h_alignment/ZNF777-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR295BIP_ChIP_ZNF777_HEK293_ENCSR166JMV_profile_pattern_5.n_75-vs-ZNF777-201.alignment profile-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR295BIP_ChIP_ZNF777_HEK293_ENCSR166JMV_profile_pattern_6.n_62-vs-ZNF777-201.alignment profile-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR295BIP_ChIP_ZNF777_HEK293_ENCSR166JMV_profile_pattern_7.n_57-vs-ZNF777-201.alignment profile-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR295BIP_ChIP_ZNF777_HEK293_ENCSR166JMV_profile_pattern_8.n_53-vs-ZNF777-201.alignment profile-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF777-201/pos_patterns.ENCSR295BIP_ChIP_ZNF777_HEK293_ENCSR166JMV_profile_pattern_9.n_40-vs-ZNF777-201.alignment profile-znf_b1h_alignment/ZNF777-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF778-207/ChipExo_models_ZNF778_profile-pos.pattern_0.n_1988-vs-ZNF778-207.alignment profile-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF778-207/ChipExo_models_ZNF778_profile-pos.pattern_1.n_1021-vs-ZNF778-207.alignment profile-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF778-207/ChipExo_models_ZNF778_profile-pos.pattern_2.n_255-vs-ZNF778-207.alignment profile-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF778-207/ChipExo_models_ZNF778_profile-pos.pattern_3.n_125-vs-ZNF778-207.alignment profile-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF778-207/ChipExo_models_ZNF778_profile-pos.pattern_4.n_108-vs-ZNF778-207.alignment profile-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF778-207/ChipExo_models_ZNF778_profile-pos.pattern_5.n_104-vs-ZNF778-207.alignment profile-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF778-207/ChipExo_models_ZNF778_profile-pos.pattern_6.n_82-vs-ZNF778-207.alignment profile-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF778-207/ChipExo_models_ZNF778_profile-pos.pattern_7.n_35-vs-ZNF778-207.alignment profile-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF778-207/Hughes_GR_models_ZNF778_profile-pos.pattern_0.n_1698-vs-ZNF778-207.alignment profile-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF778-207/Hughes_GR_models_ZNF778_profile-pos.pattern_1.n_341-vs-ZNF778-207.alignment profile-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF778-207/Hughes_GR_models_ZNF778_profile-pos.pattern_2.n_197-vs-ZNF778-207.alignment profile-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF778-207/Hughes_GR_models_ZNF778_profile-pos.pattern_3.n_59-vs-ZNF778-207.alignment profile-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF778-207/neg_patterns.ENCSR141ELR_ChIP_ZNF778_HepG2_ENCSR717GXO_profile_pattern_0.n_39-vs-ZNF778-207.alignment profile-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF778-207/neg_patterns.ENCSR141ELR_ChIP_ZNF778_HepG2_ENCSR717GXO_profile_pattern_1.n_35-vs-ZNF778-207.alignment profile-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF778-207/neg_patterns.ENCSR141ELR_ChIP_ZNF778_HepG2_ENCSR717GXO_profile_pattern_2.n_34-vs-ZNF778-207.alignment profile-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF778-207/pos_patterns.ENCSR110JLQ_ChIP_ZNF778_K562_ENCSR938VFM_profile_pattern_0.n_43-vs-ZNF778-207.alignment profile-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF778-207/pos_patterns.ENCSR110JLQ_ChIP_ZNF778_K562_ENCSR938VFM_profile_pattern_1.n_37-vs-ZNF778-207.alignment profile-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF778-207/pos_patterns.ENCSR110JLQ_ChIP_ZNF778_K562_ENCSR938VFM_profile_pattern_2.n_30-vs-ZNF778-207.alignment profile-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF778-207/pos_patterns.ENCSR110JLQ_ChIP_ZNF778_K562_ENCSR938VFM_profile_pattern_3.n_28-vs-ZNF778-207.alignment profile-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF778-207/pos_patterns.ENCSR110JLQ_ChIP_ZNF778_K562_ENCSR938VFM_profile_pattern_4.n_23-vs-ZNF778-207.alignment profile-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF778-207/pos_patterns.ENCSR110JLQ_ChIP_ZNF778_K562_ENCSR938VFM_profile_pattern_5.n_23-vs-ZNF778-207.alignment profile-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF778-207/pos_patterns.ENCSR110JLQ_ChIP_ZNF778_K562_ENCSR938VFM_profile_pattern_6.n_22-vs-ZNF778-207.alignment profile-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF778-207/pos_patterns.ENCSR110JLQ_ChIP_ZNF778_K562_ENCSR938VFM_profile_pattern_7.n_22-vs-ZNF778-207.alignment profile-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF778-207/pos_patterns.ENCSR110JLQ_ChIP_ZNF778_K562_ENCSR938VFM_profile_pattern_8.n_22-vs-ZNF778-207.alignment profile-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF778-207/pos_patterns.ENCSR110JLQ_ChIP_ZNF778_K562_ENCSR938VFM_profile_pattern_9.n_21-vs-ZNF778-207.alignment profile-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF778-207/pos_patterns.ENCSR141ELR_ChIP_ZNF778_HepG2_ENCSR717GXO_profile_pattern_0.n_337-vs-ZNF778-207.alignment profile-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF778-207/pos_patterns.ENCSR141ELR_ChIP_ZNF778_HepG2_ENCSR717GXO_profile_pattern_10.n_48-vs-ZNF778-207.alignment profile-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF778-207/pos_patterns.ENCSR141ELR_ChIP_ZNF778_HepG2_ENCSR717GXO_profile_pattern_11.n_28-vs-ZNF778-207.alignment profile-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF778-207/pos_patterns.ENCSR141ELR_ChIP_ZNF778_HepG2_ENCSR717GXO_profile_pattern_12.n_23-vs-ZNF778-207.alignment profile-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF778-207/pos_patterns.ENCSR141ELR_ChIP_ZNF778_HepG2_ENCSR717GXO_profile_pattern_1.n_316-vs-ZNF778-207.alignment profile-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF778-207/pos_patterns.ENCSR141ELR_ChIP_ZNF778_HepG2_ENCSR717GXO_profile_pattern_2.n_191-vs-ZNF778-207.alignment profile-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF778-207/pos_patterns.ENCSR141ELR_ChIP_ZNF778_HepG2_ENCSR717GXO_profile_pattern_3.n_161-vs-ZNF778-207.alignment profile-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF778-207/pos_patterns.ENCSR141ELR_ChIP_ZNF778_HepG2_ENCSR717GXO_profile_pattern_4.n_157-vs-ZNF778-207.alignment profile-znf_b1h_alignment/ZNF778-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF778-207/pos_patterns.ENCSR141ELR_ChIP_ZNF778_HepG2_ENCSR717GXO_profile_pattern_5.n_144-vs-ZNF778-207.alignment profile-znf_b1h_alignment/ZNF778-207/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF778-207/pos_patterns.ENCSR141ELR_ChIP_ZNF778_HepG2_ENCSR717GXO_profile_pattern_7.n_134-vs-ZNF778-207.alignment profile-znf_b1h_alignment/ZNF778-207/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF780A-201/pos_patterns.ENCSR214PDW_ChIP_ZNF780A_K562_ENCSR260QGM_profile_pattern_2.n_33-vs-ZNF780A-201.alignment profile-znf_b1h_alignment/ZNF780A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF780A-201/pos_patterns.ENCSR214PDW_ChIP_ZNF780A_K562_ENCSR260QGM_profile_pattern_3.n_32-vs-ZNF780A-201.alignment profile-znf_b1h_alignment/ZNF780A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF780A-201/pos_patterns.ENCSR214PDW_ChIP_ZNF780A_K562_ENCSR260QGM_profile_pattern_4.n_28-vs-ZNF780A-201.alignment profile-znf_b1h_alignment/ZNF780A-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF781-201/neg_patterns.ENCSR517HGZ_ChIP_ZNF781_HepG2_ENCSR934MDH_profile_pattern_0.n_90-vs-ZNF781-201.alignment profile-znf_b1h_alignment/ZNF781-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF781-201/neg_patterns.ENCSR517HGZ_ChIP_ZNF781_HepG2_ENCSR934MDH_profile_pattern_1.n_87-vs-ZNF781-201.alignment profile-znf_b1h_alignment/ZNF781-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF781-201/neg_patterns.ENCSR517HGZ_ChIP_ZNF781_HepG2_ENCSR934MDH_profile_pattern_2.n_62-vs-ZNF781-201.alignment profile-znf_b1h_alignment/ZNF781-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF781-201/neg_patterns.ENCSR517HGZ_ChIP_ZNF781_HepG2_ENCSR934MDH_profile_pattern_3.n_56-vs-ZNF781-201.alignment profile-znf_b1h_alignment/ZNF781-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF781-201/neg_patterns.ENCSR517HGZ_ChIP_ZNF781_HepG2_ENCSR934MDH_profile_pattern_4.n_49-vs-ZNF781-201.alignment profile-znf_b1h_alignment/ZNF781-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF781-201/neg_patterns.ENCSR517HGZ_ChIP_ZNF781_HepG2_ENCSR934MDH_profile_pattern_5.n_42-vs-ZNF781-201.alignment profile-znf_b1h_alignment/ZNF781-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF781-201/neg_patterns.ENCSR517HGZ_ChIP_ZNF781_HepG2_ENCSR934MDH_profile_pattern_6.n_33-vs-ZNF781-201.alignment profile-znf_b1h_alignment/ZNF781-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF781-201/neg_patterns.ENCSR517HGZ_ChIP_ZNF781_HepG2_ENCSR934MDH_profile_pattern_7.n_24-vs-ZNF781-201.alignment profile-znf_b1h_alignment/ZNF781-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF781-201/neg_patterns.ENCSR517HGZ_ChIP_ZNF781_HepG2_ENCSR934MDH_profile_pattern_8.n_21-vs-ZNF781-201.alignment profile-znf_b1h_alignment/ZNF781-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF781-201/neg_patterns.ENCSR517HGZ_ChIP_ZNF781_HepG2_ENCSR934MDH_profile_pattern_9.n_20-vs-ZNF781-201.alignment profile-znf_b1h_alignment/ZNF781-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF781-201/pos_patterns.ENCSR517HGZ_ChIP_ZNF781_HepG2_ENCSR934MDH_profile_pattern_0.n_1256-vs-ZNF781-201.alignment profile-znf_b1h_alignment/ZNF781-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF781-201/pos_patterns.ENCSR517HGZ_ChIP_ZNF781_HepG2_ENCSR934MDH_profile_pattern_10.n_176-vs-ZNF781-201.alignment profile-znf_b1h_alignment/ZNF781-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF781-201/pos_patterns.ENCSR517HGZ_ChIP_ZNF781_HepG2_ENCSR934MDH_profile_pattern_11.n_103-vs-ZNF781-201.alignment profile-znf_b1h_alignment/ZNF781-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF781-201/pos_patterns.ENCSR517HGZ_ChIP_ZNF781_HepG2_ENCSR934MDH_profile_pattern_12.n_28-vs-ZNF781-201.alignment profile-znf_b1h_alignment/ZNF781-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF781-201/pos_patterns.ENCSR517HGZ_ChIP_ZNF781_HepG2_ENCSR934MDH_profile_pattern_1.n_1094-vs-ZNF781-201.alignment profile-znf_b1h_alignment/ZNF781-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF781-201/pos_patterns.ENCSR517HGZ_ChIP_ZNF781_HepG2_ENCSR934MDH_profile_pattern_2.n_921-vs-ZNF781-201.alignment profile-znf_b1h_alignment/ZNF781-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF781-201/pos_patterns.ENCSR517HGZ_ChIP_ZNF781_HepG2_ENCSR934MDH_profile_pattern_3.n_369-vs-ZNF781-201.alignment profile-znf_b1h_alignment/ZNF781-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF781-201/pos_patterns.ENCSR517HGZ_ChIP_ZNF781_HepG2_ENCSR934MDH_profile_pattern_4.n_358-vs-ZNF781-201.alignment profile-znf_b1h_alignment/ZNF781-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF781-201/pos_patterns.ENCSR517HGZ_ChIP_ZNF781_HepG2_ENCSR934MDH_profile_pattern_5.n_349-vs-ZNF781-201.alignment profile-znf_b1h_alignment/ZNF781-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF781-201/pos_patterns.ENCSR517HGZ_ChIP_ZNF781_HepG2_ENCSR934MDH_profile_pattern_6.n_269-vs-ZNF781-201.alignment profile-znf_b1h_alignment/ZNF781-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF781-201/pos_patterns.ENCSR517HGZ_ChIP_ZNF781_HepG2_ENCSR934MDH_profile_pattern_7.n_268-vs-ZNF781-201.alignment profile-znf_b1h_alignment/ZNF781-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF781-201/pos_patterns.ENCSR517HGZ_ChIP_ZNF781_HepG2_ENCSR934MDH_profile_pattern_8.n_241-vs-ZNF781-201.alignment profile-znf_b1h_alignment/ZNF781-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF781-201/pos_patterns.ENCSR517HGZ_ChIP_ZNF781_HepG2_ENCSR934MDH_profile_pattern_9.n_217-vs-ZNF781-201.alignment profile-znf_b1h_alignment/ZNF781-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF782-208/ChipExo_models_ZNF782_profile-pos.pattern_0.n_44-vs-ZNF782-208.alignment profile-znf_b1h_alignment/ZNF782-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF782-208/ChipExo_models_ZNF782_profile-pos.pattern_1.n_41-vs-ZNF782-208.alignment profile-znf_b1h_alignment/ZNF782-208/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF782-208/ChipExo_models_ZNF782_profile-pos.pattern_3.n_26-vs-ZNF782-208.alignment profile-znf_b1h_alignment/ZNF782-208/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF784-201/neg_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_profile_pattern_0.n_46-vs-ZNF784-201.alignment profile-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF784-201/neg_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_profile_pattern_1.n_38-vs-ZNF784-201.alignment profile-znf_b1h_alignment/ZNF784-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF784-201/neg_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_profile_pattern_4.n_25-vs-ZNF784-201.alignment profile-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF784-201/neg_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_profile_pattern_5.n_21-vs-ZNF784-201.alignment profile-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF784-201/neg_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_profile_pattern_6.n_20-vs-ZNF784-201.alignment profile-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF784-201/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_profile_pattern_0.n_2202-vs-ZNF784-201.alignment profile-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF784-201/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_profile_pattern_10.n_220-vs-ZNF784-201.alignment profile-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF784-201/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_profile_pattern_11.n_196-vs-ZNF784-201.alignment profile-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF784-201/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_profile_pattern_12.n_172-vs-ZNF784-201.alignment profile-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF784-201/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_profile_pattern_13.n_166-vs-ZNF784-201.alignment profile-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF784-201/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_profile_pattern_14.n_153-vs-ZNF784-201.alignment profile-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF784-201/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_profile_pattern_15.n_99-vs-ZNF784-201.alignment profile-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF784-201/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_profile_pattern_16.n_78-vs-ZNF784-201.alignment profile-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF784-201/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_profile_pattern_17.n_64-vs-ZNF784-201.alignment profile-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF784-201/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_profile_pattern_18.n_36-vs-ZNF784-201.alignment profile-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF784-201/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_profile_pattern_19.n_24-vs-ZNF784-201.alignment profile-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF784-201/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_profile_pattern_1.n_1583-vs-ZNF784-201.alignment profile-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF784-201/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_profile_pattern_20.n_21-vs-ZNF784-201.alignment profile-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF784-201/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_profile_pattern_2.n_1513-vs-ZNF784-201.alignment profile-znf_b1h_alignment/ZNF784-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF784-201/pos_patterns.ENCSR082QGT_ChIP_ZNF784_HepG2_ENCSR090KMA_profile_pattern_3.n_511-vs-ZNF784-201.alignment profile-znf_b1h_alignment/ZNF784-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF785-201/ChipExo_models_ZNF785_profile-pos.pattern_2.n_21-vs-ZNF785-201.alignment profile-znf_b1h_alignment/ZNF785-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF786-202/neg_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_profile_pattern_4.n_33-vs-ZNF786-202.alignment profile-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF786-202/neg_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_profile_pattern_5.n_32-vs-ZNF786-202.alignment profile-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF786-202/neg_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_profile_pattern_6.n_30-vs-ZNF786-202.alignment profile-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF786-202/pos_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_profile_pattern_0.n_1485-vs-ZNF786-202.alignment profile-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF786-202/pos_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_profile_pattern_10.n_129-vs-ZNF786-202.alignment profile-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF786-202/pos_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_profile_pattern_11.n_125-vs-ZNF786-202.alignment profile-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF786-202/pos_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_profile_pattern_12.n_107-vs-ZNF786-202.alignment profile-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF786-202/pos_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_profile_pattern_13.n_76-vs-ZNF786-202.alignment profile-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF786-202/pos_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_profile_pattern_14.n_64-vs-ZNF786-202.alignment profile-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF786-202/pos_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_profile_pattern_15.n_27-vs-ZNF786-202.alignment profile-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF786-202/pos_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_profile_pattern_1.n_1190-vs-ZNF786-202.alignment profile-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF786-202/pos_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_profile_pattern_2.n_1159-vs-ZNF786-202.alignment profile-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF786-202/pos_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_profile_pattern_3.n_408-vs-ZNF786-202.alignment profile-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF786-202/pos_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_profile_pattern_4.n_406-vs-ZNF786-202.alignment profile-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF786-202/pos_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_profile_pattern_5.n_333-vs-ZNF786-202.alignment profile-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF786-202/pos_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_profile_pattern_6.n_198-vs-ZNF786-202.alignment profile-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF786-202/pos_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_profile_pattern_7.n_192-vs-ZNF786-202.alignment profile-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF786-202/pos_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_profile_pattern_8.n_184-vs-ZNF786-202.alignment profile-znf_b1h_alignment/ZNF786-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF786-202/pos_patterns.ENCSR206BVQ_ChIP_ZNF786_HepG2_ENCSR574NBU_profile_pattern_9.n_180-vs-ZNF786-202.alignment profile-znf_b1h_alignment/ZNF786-202/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF789-201/ChipExo_models_ZNF789_profile-pos.pattern_1.n_49-vs-ZNF789-201.alignment profile-znf_b1h_alignment/ZNF789-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF789-201/ChipExo_models_ZNF789_profile-pos.pattern_2.n_29-vs-ZNF789-201.alignment profile-znf_b1h_alignment/ZNF789-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF790-201/ChipExo_models_ZNF790_profile-pos.pattern_0.n_51-vs-ZNF790-201.alignment profile-znf_b1h_alignment/ZNF790-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF790-201/ChipExo_models_ZNF790_profile-pos.pattern_1.n_26-vs-ZNF790-201.alignment profile-znf_b1h_alignment/ZNF790-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF790-201/ChipExo_models_ZNF790_profile-pos.pattern_2.n_22-vs-ZNF790-201.alignment profile-znf_b1h_alignment/ZNF790-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF790-201/ChipExo_models_ZNF790_profile-pos.pattern_3.n_22-vs-ZNF790-201.alignment profile-znf_b1h_alignment/ZNF790-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF790-201/pos_patterns.ENCSR117XJA_ChIP_ZNF790_HepG2_ENCSR194RBA_profile_pattern_0.n_528-vs-ZNF790-201.alignment profile-znf_b1h_alignment/ZNF790-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF792-201/neg_patterns.ENCSR396SOH_ChIP_ZNF792_HepG2_ENCSR111ZKX_profile_pattern_2.n_64-vs-ZNF792-201.alignment profile-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF792-201/neg_patterns.ENCSR396SOH_ChIP_ZNF792_HepG2_ENCSR111ZKX_profile_pattern_3.n_56-vs-ZNF792-201.alignment profile-znf_b1h_alignment/ZNF792-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF792-201/neg_patterns.ENCSR396SOH_ChIP_ZNF792_HepG2_ENCSR111ZKX_profile_pattern_5.n_47-vs-ZNF792-201.alignment profile-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF792-201/neg_patterns.ENCSR396SOH_ChIP_ZNF792_HepG2_ENCSR111ZKX_profile_pattern_6.n_47-vs-ZNF792-201.alignment profile-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF792-201/neg_patterns.ENCSR396SOH_ChIP_ZNF792_HepG2_ENCSR111ZKX_profile_pattern_7.n_44-vs-ZNF792-201.alignment profile-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF792-201/neg_patterns.ENCSR396SOH_ChIP_ZNF792_HepG2_ENCSR111ZKX_profile_pattern_8.n_43-vs-ZNF792-201.alignment profile-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF792-201/neg_patterns.ENCSR396SOH_ChIP_ZNF792_HepG2_ENCSR111ZKX_profile_pattern_9.n_39-vs-ZNF792-201.alignment profile-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF792-201/neg_patterns.ENCSR679STZ_ChIP_ZNF792_HEK293_ENCSR594DKD_profile_pattern_0.n_42-vs-ZNF792-201.alignment profile-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF792-201/neg_patterns.ENCSR679STZ_ChIP_ZNF792_HEK293_ENCSR594DKD_profile_pattern_1.n_34-vs-ZNF792-201.alignment profile-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF792-201/neg_patterns.ENCSR679STZ_ChIP_ZNF792_HEK293_ENCSR594DKD_profile_pattern_2.n_32-vs-ZNF792-201.alignment profile-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF792-201/neg_patterns.ENCSR679STZ_ChIP_ZNF792_HEK293_ENCSR594DKD_profile_pattern_3.n_30-vs-ZNF792-201.alignment profile-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF792-201/neg_patterns.ENCSR679STZ_ChIP_ZNF792_HEK293_ENCSR594DKD_profile_pattern_4.n_25-vs-ZNF792-201.alignment profile-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF792-201/pos_patterns.ENCSR396SOH_ChIP_ZNF792_HepG2_ENCSR111ZKX_profile_pattern_0.n_2919-vs-ZNF792-201.alignment profile-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF792-201/pos_patterns.ENCSR396SOH_ChIP_ZNF792_HepG2_ENCSR111ZKX_profile_pattern_10.n_377-vs-ZNF792-201.alignment profile-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF792-201/pos_patterns.ENCSR396SOH_ChIP_ZNF792_HepG2_ENCSR111ZKX_profile_pattern_11.n_361-vs-ZNF792-201.alignment profile-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF792-201/pos_patterns.ENCSR396SOH_ChIP_ZNF792_HepG2_ENCSR111ZKX_profile_pattern_12.n_346-vs-ZNF792-201.alignment profile-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF792-201/pos_patterns.ENCSR396SOH_ChIP_ZNF792_HepG2_ENCSR111ZKX_profile_pattern_13.n_268-vs-ZNF792-201.alignment profile-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF792-201/pos_patterns.ENCSR396SOH_ChIP_ZNF792_HepG2_ENCSR111ZKX_profile_pattern_14.n_250-vs-ZNF792-201.alignment profile-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF792-201/pos_patterns.ENCSR396SOH_ChIP_ZNF792_HepG2_ENCSR111ZKX_profile_pattern_15.n_236-vs-ZNF792-201.alignment profile-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF792-201/pos_patterns.ENCSR396SOH_ChIP_ZNF792_HepG2_ENCSR111ZKX_profile_pattern_16.n_179-vs-ZNF792-201.alignment profile-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF792-201/pos_patterns.ENCSR396SOH_ChIP_ZNF792_HepG2_ENCSR111ZKX_profile_pattern_17.n_139-vs-ZNF792-201.alignment profile-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF792-201/pos_patterns.ENCSR396SOH_ChIP_ZNF792_HepG2_ENCSR111ZKX_profile_pattern_18.n_118-vs-ZNF792-201.alignment profile-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF792-201/pos_patterns.ENCSR396SOH_ChIP_ZNF792_HepG2_ENCSR111ZKX_profile_pattern_19.n_77-vs-ZNF792-201.alignment profile-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF792-201/pos_patterns.ENCSR396SOH_ChIP_ZNF792_HepG2_ENCSR111ZKX_profile_pattern_1.n_2011-vs-ZNF792-201.alignment profile-znf_b1h_alignment/ZNF792-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF792-201/pos_patterns.ENCSR396SOH_ChIP_ZNF792_HepG2_ENCSR111ZKX_profile_pattern_20.n_65-vs-ZNF792-201.alignment profile-znf_b1h_alignment/ZNF792-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF792-201/pos_patterns.ENCSR396SOH_ChIP_ZNF792_HepG2_ENCSR111ZKX_profile_pattern_22.n_55-vs-ZNF792-201.alignment profile-znf_b1h_alignment/ZNF792-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF800-201/pos_patterns.ENCSR701WPG_ChIP_ZNF800_HepG2_ENCSR786LIM_profile_pattern_15.n_29-vs-ZNF800-201.alignment profile-znf_b1h_alignment/ZNF800-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF800-201/pos_patterns.ENCSR701WPG_ChIP_ZNF800_HepG2_ENCSR786LIM_profile_pattern_2.n_875-vs-ZNF800-201.alignment profile-znf_b1h_alignment/ZNF800-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF800-201/pos_patterns.ENCSR701WPG_ChIP_ZNF800_HepG2_ENCSR786LIM_profile_pattern_3.n_380-vs-ZNF800-201.alignment profile-znf_b1h_alignment/ZNF800-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF800-201/pos_patterns.ENCSR701WPG_ChIP_ZNF800_HepG2_ENCSR786LIM_profile_pattern_4.n_326-vs-ZNF800-201.alignment profile-znf_b1h_alignment/ZNF800-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF800-201/pos_patterns.ENCSR701WPG_ChIP_ZNF800_HepG2_ENCSR786LIM_profile_pattern_6.n_260-vs-ZNF800-201.alignment profile-znf_b1h_alignment/ZNF800-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF800-201/pos_patterns.ENCSR701WPG_ChIP_ZNF800_HepG2_ENCSR786LIM_profile_pattern_7.n_248-vs-ZNF800-201.alignment profile-znf_b1h_alignment/ZNF800-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF800-201/pos_patterns.ENCSR701WPG_ChIP_ZNF800_HepG2_ENCSR786LIM_profile_pattern_8.n_203-vs-ZNF800-201.alignment profile-znf_b1h_alignment/ZNF800-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF800-201/pos_patterns.ENCSR701WPG_ChIP_ZNF800_HepG2_ENCSR786LIM_profile_pattern_9.n_177-vs-ZNF800-201.alignment profile-znf_b1h_alignment/ZNF800-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF800-208/neg_patterns.ENCSR701WPG_ChIP_ZNF800_HepG2_ENCSR786LIM_profile_pattern_0.n_47-vs-ZNF800-208.alignment profile-znf_b1h_alignment/ZNF800-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF800-208/neg_patterns.ENCSR701WPG_ChIP_ZNF800_HepG2_ENCSR786LIM_profile_pattern_1.n_39-vs-ZNF800-208.alignment profile-znf_b1h_alignment/ZNF800-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF800-208/pos_patterns.ENCSR701WPG_ChIP_ZNF800_HepG2_ENCSR786LIM_profile_pattern_0.n_5678-vs-ZNF800-208.alignment profile-znf_b1h_alignment/ZNF800-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF800-208/pos_patterns.ENCSR701WPG_ChIP_ZNF800_HepG2_ENCSR786LIM_profile_pattern_10.n_117-vs-ZNF800-208.alignment profile-znf_b1h_alignment/ZNF800-208/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF800-208/pos_patterns.ENCSR701WPG_ChIP_ZNF800_HepG2_ENCSR786LIM_profile_pattern_1.n_1001-vs-ZNF800-208.alignment profile-znf_b1h_alignment/ZNF800-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF800-208/pos_patterns.ENCSR701WPG_ChIP_ZNF800_HepG2_ENCSR786LIM_profile_pattern_2.n_875-vs-ZNF800-208.alignment profile-znf_b1h_alignment/ZNF800-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF800-208/pos_patterns.ENCSR701WPG_ChIP_ZNF800_HepG2_ENCSR786LIM_profile_pattern_3.n_380-vs-ZNF800-208.alignment profile-znf_b1h_alignment/ZNF800-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF800-208/pos_patterns.ENCSR701WPG_ChIP_ZNF800_HepG2_ENCSR786LIM_profile_pattern_4.n_326-vs-ZNF800-208.alignment profile-znf_b1h_alignment/ZNF800-208/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF800-208/pos_patterns.ENCSR701WPG_ChIP_ZNF800_HepG2_ENCSR786LIM_profile_pattern_6.n_260-vs-ZNF800-208.alignment profile-znf_b1h_alignment/ZNF800-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF800-208/pos_patterns.ENCSR701WPG_ChIP_ZNF800_HepG2_ENCSR786LIM_profile_pattern_7.n_248-vs-ZNF800-208.alignment profile-znf_b1h_alignment/ZNF800-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF800-208/pos_patterns.ENCSR701WPG_ChIP_ZNF800_HepG2_ENCSR786LIM_profile_pattern_8.n_203-vs-ZNF800-208.alignment profile-znf_b1h_alignment/ZNF800-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF800-208/pos_patterns.ENCSR701WPG_ChIP_ZNF800_HepG2_ENCSR786LIM_profile_pattern_9.n_177-vs-ZNF800-208.alignment profile-znf_b1h_alignment/ZNF800-208/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF805-201/ChipExo_models_ZNF805_profile-pos.pattern_0.n_216-vs-ZNF805-201.alignment profile-znf_b1h_alignment/ZNF805-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF805-201/ChipExo_models_ZNF805_profile-pos.pattern_1.n_119-vs-ZNF805-201.alignment profile-znf_b1h_alignment/ZNF805-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF805-201/ChipExo_models_ZNF805_profile-pos.pattern_2.n_91-vs-ZNF805-201.alignment profile-znf_b1h_alignment/ZNF805-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF805-201/ChipExo_models_ZNF805_profile-pos.pattern_3.n_91-vs-ZNF805-201.alignment profile-znf_b1h_alignment/ZNF805-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF805-201/ChipExo_models_ZNF805_profile-pos.pattern_4.n_60-vs-ZNF805-201.alignment profile-znf_b1h_alignment/ZNF805-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF805-201/ChipExo_models_ZNF805_profile-pos.pattern_5.n_46-vs-ZNF805-201.alignment profile-znf_b1h_alignment/ZNF805-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF805-201/ChipExo_models_ZNF805_profile-pos.pattern_6.n_25-vs-ZNF805-201.alignment profile-znf_b1h_alignment/ZNF805-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF805-201/ChipExo_models_ZNF805_profile-pos.pattern_7.n_23-vs-ZNF805-201.alignment profile-znf_b1h_alignment/ZNF805-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF808-201/ChipExo_models_ZNF808_profile-pos.pattern_0.n_1666-vs-ZNF808-201.alignment profile-znf_b1h_alignment/ZNF808-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF808-201/ChipExo_models_ZNF808_profile-pos.pattern_1.n_654-vs-ZNF808-201.alignment profile-znf_b1h_alignment/ZNF808-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF808-201/ChipExo_models_ZNF808_profile-pos.pattern_2.n_85-vs-ZNF808-201.alignment profile-znf_b1h_alignment/ZNF808-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF808-201/ChipExo_models_ZNF808_profile-pos.pattern_3.n_48-vs-ZNF808-201.alignment profile-znf_b1h_alignment/ZNF808-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF808-201/ChipExo_models_ZNF808_profile-pos.pattern_4.n_24-vs-ZNF808-201.alignment profile-znf_b1h_alignment/ZNF808-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF81-202/ChipExo_models_ZNF81_profile-pos.pattern_0.n_1024-vs-ZNF81-202.alignment profile-znf_b1h_alignment/ZNF81-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF81-202/ChipExo_models_ZNF81_profile-pos.pattern_1.n_56-vs-ZNF81-202.alignment profile-znf_b1h_alignment/ZNF81-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF81-202/ChipExo_models_ZNF81_profile-pos.pattern_2.n_46-vs-ZNF81-202.alignment profile-znf_b1h_alignment/ZNF81-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF81-202/ChipExo_models_ZNF81_profile-pos.pattern_3.n_44-vs-ZNF81-202.alignment profile-znf_b1h_alignment/ZNF81-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF81-202/ChipExo_models_ZNF81_profile-pos.pattern_4.n_28-vs-ZNF81-202.alignment profile-znf_b1h_alignment/ZNF81-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF81-202/ChipExo_models_ZNF81_profile-pos.pattern_5.n_27-vs-ZNF81-202.alignment profile-znf_b1h_alignment/ZNF81-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF81-202/ChipExo_models_ZNF81_profile-pos.pattern_6.n_23-vs-ZNF81-202.alignment profile-znf_b1h_alignment/ZNF81-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF81-202/ChipExo_models_ZNF81_profile-pos.pattern_7.n_21-vs-ZNF81-202.alignment profile-znf_b1h_alignment/ZNF81-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF816-203/ChipExo_models_ZNF816_profile-pos.pattern_0.n_91-vs-ZNF816-203.alignment profile-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF816-203/ChipExo_models_ZNF816_profile-pos.pattern_1.n_43-vs-ZNF816-203.alignment profile-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF816-203/ChipExo_models_ZNF816_profile-pos.pattern_2.n_38-vs-ZNF816-203.alignment profile-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF816-203/ChipExo_models_ZNF816_profile-pos.pattern_3.n_37-vs-ZNF816-203.alignment profile-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF816-203/ChipExo_models_ZNF816_profile-pos.pattern_4.n_32-vs-ZNF816-203.alignment profile-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF816-203/ChipExo_models_ZNF816_profile-pos.pattern_5.n_27-vs-ZNF816-203.alignment profile-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF816-203/ChipExo_models_ZNF816_profile-pos.pattern_6.n_26-vs-ZNF816-203.alignment profile-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF816-203/ChipExo_models_ZNF816_profile-pos.pattern_7.n_23-vs-ZNF816-203.alignment profile-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF816-203/Hughes_GR_models_ZNF816_profile-pos.pattern_0.n_1565-vs-ZNF816-203.alignment profile-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF816-203/neg_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_profile_pattern_0.n_38-vs-ZNF816-203.alignment profile-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF816-203/neg_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_profile_pattern_1.n_33-vs-ZNF816-203.alignment profile-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF816-203/neg_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_profile_pattern_2.n_32-vs-ZNF816-203.alignment profile-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF816-203/neg_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_profile_pattern_3.n_31-vs-ZNF816-203.alignment profile-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF816-203/neg_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_profile_pattern_4.n_29-vs-ZNF816-203.alignment profile-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_profile_pattern_0.n_846-vs-ZNF816-203.alignment profile-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_profile_pattern_10.n_297-vs-ZNF816-203.alignment profile-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_profile_pattern_11.n_274-vs-ZNF816-203.alignment profile-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_profile_pattern_12.n_272-vs-ZNF816-203.alignment profile-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_profile_pattern_13.n_262-vs-ZNF816-203.alignment profile-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_profile_pattern_14.n_182-vs-ZNF816-203.alignment profile-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_profile_pattern_15.n_148-vs-ZNF816-203.alignment profile-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_profile_pattern_16.n_144-vs-ZNF816-203.alignment profile-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_profile_pattern_17.n_138-vs-ZNF816-203.alignment profile-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_profile_pattern_18.n_130-vs-ZNF816-203.alignment profile-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_profile_pattern_19.n_100-vs-ZNF816-203.alignment profile-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_profile_pattern_1.n_796-vs-ZNF816-203.alignment profile-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_profile_pattern_20.n_67-vs-ZNF816-203.alignment profile-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_profile_pattern_21.n_65-vs-ZNF816-203.alignment profile-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_profile_pattern_22.n_57-vs-ZNF816-203.alignment profile-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_profile_pattern_23.n_54-vs-ZNF816-203.alignment profile-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_profile_pattern_24.n_54-vs-ZNF816-203.alignment profile-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_profile_pattern_25.n_48-vs-ZNF816-203.alignment profile-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_profile_pattern_26.n_46-vs-ZNF816-203.alignment profile-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_profile_pattern_27.n_42-vs-ZNF816-203.alignment profile-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_profile_pattern_28.n_35-vs-ZNF816-203.alignment profile-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_profile_pattern_29.n_33-vs-ZNF816-203.alignment profile-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_profile_pattern_2.n_665-vs-ZNF816-203.alignment profile-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_profile_pattern_3.n_547-vs-ZNF816-203.alignment profile-znf_b1h_alignment/ZNF816-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_profile_pattern_4.n_495-vs-ZNF816-203.alignment profile-znf_b1h_alignment/ZNF816-203/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_profile_pattern_7.n_352-vs-ZNF816-203.alignment profile-znf_b1h_alignment/ZNF816-203/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF816-203/pos_patterns.ENCSR905BNO_ChIP_ZNF816_HepG2_ENCSR550FAZ_profile_pattern_9.n_338-vs-ZNF816-203.alignment profile-znf_b1h_alignment/ZNF816-203/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF8-201/neg_patterns.ENCSR785UCD_ChIP_ZNF8_MCF-7_ENCSR311BIU_profile_pattern_0.n_91-vs-ZNF8-201.alignment profile-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF8-201/neg_patterns.ENCSR785UCD_ChIP_ZNF8_MCF-7_ENCSR311BIU_profile_pattern_1.n_89-vs-ZNF8-201.alignment profile-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF8-201/neg_patterns.ENCSR785UCD_ChIP_ZNF8_MCF-7_ENCSR311BIU_profile_pattern_2.n_66-vs-ZNF8-201.alignment profile-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF8-201/neg_patterns.ENCSR785UCD_ChIP_ZNF8_MCF-7_ENCSR311BIU_profile_pattern_3.n_37-vs-ZNF8-201.alignment profile-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF8-201/neg_patterns.ENCSR785UCD_ChIP_ZNF8_MCF-7_ENCSR311BIU_profile_pattern_4.n_35-vs-ZNF8-201.alignment profile-znf_b1h_alignment/ZNF8-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF8-201/neg_patterns.ENCSR785UCD_ChIP_ZNF8_MCF-7_ENCSR311BIU_profile_pattern_6.n_30-vs-ZNF8-201.alignment profile-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF8-201/neg_patterns.ENCSR785UCD_ChIP_ZNF8_MCF-7_ENCSR311BIU_profile_pattern_7.n_28-vs-ZNF8-201.alignment profile-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF8-201/neg_patterns.ENCSR785UCD_ChIP_ZNF8_MCF-7_ENCSR311BIU_profile_pattern_8.n_27-vs-ZNF8-201.alignment profile-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR325QLX_ChIP_ZNF8_SK-N-SH_ENCSR812AAD_profile_pattern_0.n_7795-vs-ZNF8-201.alignment profile-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR325QLX_ChIP_ZNF8_SK-N-SH_ENCSR812AAD_profile_pattern_10.n_57-vs-ZNF8-201.alignment profile-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR325QLX_ChIP_ZNF8_SK-N-SH_ENCSR812AAD_profile_pattern_11.n_47-vs-ZNF8-201.alignment profile-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR325QLX_ChIP_ZNF8_SK-N-SH_ENCSR812AAD_profile_pattern_12.n_35-vs-ZNF8-201.alignment profile-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR325QLX_ChIP_ZNF8_SK-N-SH_ENCSR812AAD_profile_pattern_13.n_31-vs-ZNF8-201.alignment profile-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR325QLX_ChIP_ZNF8_SK-N-SH_ENCSR812AAD_profile_pattern_14.n_28-vs-ZNF8-201.alignment profile-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR325QLX_ChIP_ZNF8_SK-N-SH_ENCSR812AAD_profile_pattern_1.n_4615-vs-ZNF8-201.alignment profile-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR325QLX_ChIP_ZNF8_SK-N-SH_ENCSR812AAD_profile_pattern_2.n_639-vs-ZNF8-201.alignment profile-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR325QLX_ChIP_ZNF8_SK-N-SH_ENCSR812AAD_profile_pattern_3.n_539-vs-ZNF8-201.alignment profile-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR325QLX_ChIP_ZNF8_SK-N-SH_ENCSR812AAD_profile_pattern_4.n_202-vs-ZNF8-201.alignment profile-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR325QLX_ChIP_ZNF8_SK-N-SH_ENCSR812AAD_profile_pattern_5.n_185-vs-ZNF8-201.alignment profile-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR325QLX_ChIP_ZNF8_SK-N-SH_ENCSR812AAD_profile_pattern_6.n_138-vs-ZNF8-201.alignment profile-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR325QLX_ChIP_ZNF8_SK-N-SH_ENCSR812AAD_profile_pattern_7.n_131-vs-ZNF8-201.alignment profile-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR325QLX_ChIP_ZNF8_SK-N-SH_ENCSR812AAD_profile_pattern_8.n_128-vs-ZNF8-201.alignment profile-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR325QLX_ChIP_ZNF8_SK-N-SH_ENCSR812AAD_profile_pattern_9.n_107-vs-ZNF8-201.alignment profile-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR785UCD_ChIP_ZNF8_MCF-7_ENCSR311BIU_profile_pattern_0.n_273-vs-ZNF8-201.alignment profile-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR785UCD_ChIP_ZNF8_MCF-7_ENCSR311BIU_profile_pattern_10.n_29-vs-ZNF8-201.alignment profile-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR785UCD_ChIP_ZNF8_MCF-7_ENCSR311BIU_profile_pattern_11.n_28-vs-ZNF8-201.alignment profile-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR785UCD_ChIP_ZNF8_MCF-7_ENCSR311BIU_profile_pattern_12.n_27-vs-ZNF8-201.alignment profile-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR785UCD_ChIP_ZNF8_MCF-7_ENCSR311BIU_profile_pattern_13.n_26-vs-ZNF8-201.alignment profile-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR785UCD_ChIP_ZNF8_MCF-7_ENCSR311BIU_profile_pattern_1.n_169-vs-ZNF8-201.alignment profile-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR785UCD_ChIP_ZNF8_MCF-7_ENCSR311BIU_profile_pattern_2.n_108-vs-ZNF8-201.alignment profile-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR785UCD_ChIP_ZNF8_MCF-7_ENCSR311BIU_profile_pattern_3.n_91-vs-ZNF8-201.alignment profile-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR785UCD_ChIP_ZNF8_MCF-7_ENCSR311BIU_profile_pattern_4.n_69-vs-ZNF8-201.alignment profile-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR785UCD_ChIP_ZNF8_MCF-7_ENCSR311BIU_profile_pattern_5.n_47-vs-ZNF8-201.alignment profile-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR785UCD_ChIP_ZNF8_MCF-7_ENCSR311BIU_profile_pattern_6.n_37-vs-ZNF8-201.alignment profile-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR785UCD_ChIP_ZNF8_MCF-7_ENCSR311BIU_profile_pattern_7.n_32-vs-ZNF8-201.alignment profile-znf_b1h_alignment/ZNF8-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF8-201/pos_patterns.ENCSR785UCD_ChIP_ZNF8_MCF-7_ENCSR311BIU_profile_pattern_8.n_30-vs-ZNF8-201.alignment profile-znf_b1h_alignment/ZNF8-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF827-204/neg_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_profile_pattern_0.n_68-vs-ZNF827-204.alignment profile-znf_b1h_alignment/ZNF827-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF827-204/neg_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_profile_pattern_1.n_38-vs-ZNF827-204.alignment profile-znf_b1h_alignment/ZNF827-204/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF827-204/pos_patterns.ENCSR148FHD_ChIP_ZNF827_HepG2_ENCSR563RCZ_profile_pattern_16.n_20-vs-ZNF827-204.alignment profile-znf_b1h_alignment/ZNF827-204/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR257XVY_ChIP_ZNF83_K562_ENCSR832DWY_profile_pattern_18.n_71-vs-ZNF83-201.alignment profile-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR257XVY_ChIP_ZNF83_K562_ENCSR832DWY_profile_pattern_19.n_61-vs-ZNF83-201.alignment profile-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR257XVY_ChIP_ZNF83_K562_ENCSR832DWY_profile_pattern_1.n_916-vs-ZNF83-201.alignment profile-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR257XVY_ChIP_ZNF83_K562_ENCSR832DWY_profile_pattern_20.n_59-vs-ZNF83-201.alignment profile-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR257XVY_ChIP_ZNF83_K562_ENCSR832DWY_profile_pattern_21.n_51-vs-ZNF83-201.alignment profile-znf_b1h_alignment/ZNF83-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR257XVY_ChIP_ZNF83_K562_ENCSR832DWY_profile_pattern_25.n_36-vs-ZNF83-201.alignment profile-znf_b1h_alignment/ZNF83-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR257XVY_ChIP_ZNF83_K562_ENCSR832DWY_profile_pattern_27.n_32-vs-ZNF83-201.alignment profile-znf_b1h_alignment/ZNF83-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR257XVY_ChIP_ZNF83_K562_ENCSR832DWY_profile_pattern_29.n_23-vs-ZNF83-201.alignment profile-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR257XVY_ChIP_ZNF83_K562_ENCSR832DWY_profile_pattern_2.n_799-vs-ZNF83-201.alignment profile-znf_b1h_alignment/ZNF83-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR257XVY_ChIP_ZNF83_K562_ENCSR832DWY_profile_pattern_3.n_788-vs-ZNF83-201.alignment profile-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR257XVY_ChIP_ZNF83_K562_ENCSR832DWY_profile_pattern_4.n_735-vs-ZNF83-201.alignment profile-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR257XVY_ChIP_ZNF83_K562_ENCSR832DWY_profile_pattern_5.n_720-vs-ZNF83-201.alignment profile-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR257XVY_ChIP_ZNF83_K562_ENCSR832DWY_profile_pattern_6.n_529-vs-ZNF83-201.alignment profile-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR257XVY_ChIP_ZNF83_K562_ENCSR832DWY_profile_pattern_7.n_326-vs-ZNF83-201.alignment profile-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR257XVY_ChIP_ZNF83_K562_ENCSR832DWY_profile_pattern_8.n_314-vs-ZNF83-201.alignment profile-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR257XVY_ChIP_ZNF83_K562_ENCSR832DWY_profile_pattern_9.n_250-vs-ZNF83-201.alignment profile-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR263XFO_ChIP_ZNF83_HepG2_ENCSR806NGY_profile_pattern_0.n_697-vs-ZNF83-201.alignment profile-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR263XFO_ChIP_ZNF83_HepG2_ENCSR806NGY_profile_pattern_10.n_131-vs-ZNF83-201.alignment profile-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR263XFO_ChIP_ZNF83_HepG2_ENCSR806NGY_profile_pattern_11.n_122-vs-ZNF83-201.alignment profile-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR263XFO_ChIP_ZNF83_HepG2_ENCSR806NGY_profile_pattern_12.n_111-vs-ZNF83-201.alignment profile-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR263XFO_ChIP_ZNF83_HepG2_ENCSR806NGY_profile_pattern_13.n_111-vs-ZNF83-201.alignment profile-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR263XFO_ChIP_ZNF83_HepG2_ENCSR806NGY_profile_pattern_14.n_92-vs-ZNF83-201.alignment profile-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR263XFO_ChIP_ZNF83_HepG2_ENCSR806NGY_profile_pattern_15.n_78-vs-ZNF83-201.alignment profile-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR263XFO_ChIP_ZNF83_HepG2_ENCSR806NGY_profile_pattern_16.n_77-vs-ZNF83-201.alignment profile-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR263XFO_ChIP_ZNF83_HepG2_ENCSR806NGY_profile_pattern_17.n_56-vs-ZNF83-201.alignment profile-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR263XFO_ChIP_ZNF83_HepG2_ENCSR806NGY_profile_pattern_18.n_53-vs-ZNF83-201.alignment profile-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR263XFO_ChIP_ZNF83_HepG2_ENCSR806NGY_profile_pattern_19.n_46-vs-ZNF83-201.alignment profile-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR263XFO_ChIP_ZNF83_HepG2_ENCSR806NGY_profile_pattern_1.n_522-vs-ZNF83-201.alignment profile-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR263XFO_ChIP_ZNF83_HepG2_ENCSR806NGY_profile_pattern_20.n_26-vs-ZNF83-201.alignment profile-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR263XFO_ChIP_ZNF83_HepG2_ENCSR806NGY_profile_pattern_21.n_21-vs-ZNF83-201.alignment profile-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR263XFO_ChIP_ZNF83_HepG2_ENCSR806NGY_profile_pattern_2.n_303-vs-ZNF83-201.alignment profile-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR263XFO_ChIP_ZNF83_HepG2_ENCSR806NGY_profile_pattern_3.n_296-vs-ZNF83-201.alignment profile-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR263XFO_ChIP_ZNF83_HepG2_ENCSR806NGY_profile_pattern_4.n_223-vs-ZNF83-201.alignment profile-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR263XFO_ChIP_ZNF83_HepG2_ENCSR806NGY_profile_pattern_5.n_188-vs-ZNF83-201.alignment profile-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR263XFO_ChIP_ZNF83_HepG2_ENCSR806NGY_profile_pattern_6.n_186-vs-ZNF83-201.alignment profile-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR263XFO_ChIP_ZNF83_HepG2_ENCSR806NGY_profile_pattern_7.n_164-vs-ZNF83-201.alignment profile-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR263XFO_ChIP_ZNF83_HepG2_ENCSR806NGY_profile_pattern_8.n_143-vs-ZNF83-201.alignment profile-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF83-201/pos_patterns.ENCSR263XFO_ChIP_ZNF83_HepG2_ENCSR806NGY_profile_pattern_9.n_132-vs-ZNF83-201.alignment profile-znf_b1h_alignment/ZNF83-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF837-201/neg_patterns.ENCSR711UOA_ChIP_ZNF837_HEK293_ENCSR948EZY_profile_pattern_0.n_50-vs-ZNF837-201.alignment profile-znf_b1h_alignment/ZNF837-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF837-201/neg_patterns.ENCSR711UOA_ChIP_ZNF837_HEK293_ENCSR948EZY_profile_pattern_1.n_50-vs-ZNF837-201.alignment profile-znf_b1h_alignment/ZNF837-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF837-201/neg_patterns.ENCSR711UOA_ChIP_ZNF837_HEK293_ENCSR948EZY_profile_pattern_2.n_39-vs-ZNF837-201.alignment profile-znf_b1h_alignment/ZNF837-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF837-201/neg_patterns.ENCSR711UOA_ChIP_ZNF837_HEK293_ENCSR948EZY_profile_pattern_3.n_37-vs-ZNF837-201.alignment profile-znf_b1h_alignment/ZNF837-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF837-201/neg_patterns.ENCSR711UOA_ChIP_ZNF837_HEK293_ENCSR948EZY_profile_pattern_4.n_37-vs-ZNF837-201.alignment profile-znf_b1h_alignment/ZNF837-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF837-201/neg_patterns.ENCSR711UOA_ChIP_ZNF837_HEK293_ENCSR948EZY_profile_pattern_5.n_28-vs-ZNF837-201.alignment profile-znf_b1h_alignment/ZNF837-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF837-201/neg_patterns.ENCSR711UOA_ChIP_ZNF837_HEK293_ENCSR948EZY_profile_pattern_6.n_28-vs-ZNF837-201.alignment profile-znf_b1h_alignment/ZNF837-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF837-201/neg_patterns.ENCSR711UOA_ChIP_ZNF837_HEK293_ENCSR948EZY_profile_pattern_7.n_22-vs-ZNF837-201.alignment profile-znf_b1h_alignment/ZNF837-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF837-201/neg_patterns.ENCSR711UOA_ChIP_ZNF837_HEK293_ENCSR948EZY_profile_pattern_8.n_22-vs-ZNF837-201.alignment profile-znf_b1h_alignment/ZNF837-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF837-201/pos_patterns.ENCSR711UOA_ChIP_ZNF837_HEK293_ENCSR948EZY_profile_pattern_0.n_349-vs-ZNF837-201.alignment profile-znf_b1h_alignment/ZNF837-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF837-201/pos_patterns.ENCSR711UOA_ChIP_ZNF837_HEK293_ENCSR948EZY_profile_pattern_1.n_81-vs-ZNF837-201.alignment profile-znf_b1h_alignment/ZNF837-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF837-201/pos_patterns.ENCSR711UOA_ChIP_ZNF837_HEK293_ENCSR948EZY_profile_pattern_2.n_78-vs-ZNF837-201.alignment profile-znf_b1h_alignment/ZNF837-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF837-201/pos_patterns.ENCSR711UOA_ChIP_ZNF837_HEK293_ENCSR948EZY_profile_pattern_3.n_59-vs-ZNF837-201.alignment profile-znf_b1h_alignment/ZNF837-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF84-201/pos_patterns.ENCSR376UMR_ChIP_ZNF84_K562_ENCSR301TKB_profile_pattern_6.n_49-vs-ZNF84-201.alignment profile-znf_b1h_alignment/ZNF84-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF84-201/pos_patterns.ENCSR376UMR_ChIP_ZNF84_K562_ENCSR301TKB_profile_pattern_8.n_43-vs-ZNF84-201.alignment profile-znf_b1h_alignment/ZNF84-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF84-201/pos_patterns.ENCSR376UMR_ChIP_ZNF84_K562_ENCSR301TKB_profile_pattern_9.n_35-vs-ZNF84-201.alignment profile-znf_b1h_alignment/ZNF84-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-201/neg_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_0.n_797-vs-ZNF843-201.alignment profile-znf_b1h_alignment/ZNF843-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-201/neg_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_13.n_91-vs-ZNF843-201.alignment profile-znf_b1h_alignment/ZNF843-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-201/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_17.n_24-vs-ZNF843-201.alignment profile-znf_b1h_alignment/ZNF843-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-201/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_2.n_3252-vs-ZNF843-201.alignment profile-znf_b1h_alignment/ZNF843-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-201/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_5.n_2241-vs-ZNF843-201.alignment profile-znf_b1h_alignment/ZNF843-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-201/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_6.n_1508-vs-ZNF843-201.alignment profile-znf_b1h_alignment/ZNF843-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-201/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_7.n_503-vs-ZNF843-201.alignment profile-znf_b1h_alignment/ZNF843-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-201/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_8.n_318-vs-ZNF843-201.alignment profile-znf_b1h_alignment/ZNF843-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-201/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_9.n_223-vs-ZNF843-201.alignment profile-znf_b1h_alignment/ZNF843-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/neg_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_0.n_797-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/neg_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_10.n_131-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/neg_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_11.n_119-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/neg_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_12.n_98-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/neg_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_13.n_91-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/neg_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_14.n_88-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/neg_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_15.n_73-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/neg_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_16.n_73-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/neg_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_17.n_60-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/neg_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_18.n_60-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/neg_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_19.n_46-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/neg_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_1.n_787-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/neg_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_20.n_42-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/neg_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_21.n_38-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/neg_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_22.n_35-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/neg_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_23.n_34-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/neg_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_24.n_32-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/neg_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_25.n_28-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/neg_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_26.n_27-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/neg_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_2.n_625-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/neg_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_3.n_611-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/neg_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_4.n_321-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/neg_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_5.n_269-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/neg_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_6.n_243-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/neg_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_7.n_168-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/neg_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_8.n_148-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/neg_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_9.n_131-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_0.n_9810-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_10.n_83-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_11.n_72-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_12.n_60-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_13.n_54-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_14.n_46-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_15.n_36-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_16.n_28-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_17.n_24-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_1.n_3340-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_2.n_3252-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_3.n_2456-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_4.n_2273-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_5.n_2241-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_6.n_1508-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_7.n_503-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_8.n_318-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF843-202/pos_patterns.ENCSR502KPJ_ChIP_ZNF843_HEK293_ENCSR597JAK_profile_pattern_9.n_223-vs-ZNF843-202.alignment profile-znf_b1h_alignment/ZNF843-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF846-205/ChipExo_models_ZNF846_profile-pos.pattern_0.n_493-vs-ZNF846-205.alignment profile-znf_b1h_alignment/ZNF846-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF846-205/ChipExo_models_ZNF846_profile-pos.pattern_10.n_28-vs-ZNF846-205.alignment profile-znf_b1h_alignment/ZNF846-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF846-205/ChipExo_models_ZNF846_profile-pos.pattern_11.n_26-vs-ZNF846-205.alignment profile-znf_b1h_alignment/ZNF846-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF846-205/ChipExo_models_ZNF846_profile-pos.pattern_12.n_25-vs-ZNF846-205.alignment profile-znf_b1h_alignment/ZNF846-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF846-205/ChipExo_models_ZNF846_profile-pos.pattern_13.n_21-vs-ZNF846-205.alignment profile-znf_b1h_alignment/ZNF846-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF846-205/ChipExo_models_ZNF846_profile-pos.pattern_14.n_20-vs-ZNF846-205.alignment profile-znf_b1h_alignment/ZNF846-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF846-205/ChipExo_models_ZNF846_profile-pos.pattern_1.n_237-vs-ZNF846-205.alignment profile-znf_b1h_alignment/ZNF846-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF846-205/ChipExo_models_ZNF846_profile-pos.pattern_2.n_169-vs-ZNF846-205.alignment profile-znf_b1h_alignment/ZNF846-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF846-205/ChipExo_models_ZNF846_profile-pos.pattern_3.n_150-vs-ZNF846-205.alignment profile-znf_b1h_alignment/ZNF846-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF846-205/ChipExo_models_ZNF846_profile-pos.pattern_4.n_105-vs-ZNF846-205.alignment profile-znf_b1h_alignment/ZNF846-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF846-205/ChipExo_models_ZNF846_profile-pos.pattern_5.n_78-vs-ZNF846-205.alignment profile-znf_b1h_alignment/ZNF846-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF846-205/ChipExo_models_ZNF846_profile-pos.pattern_6.n_75-vs-ZNF846-205.alignment profile-znf_b1h_alignment/ZNF846-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF846-205/ChipExo_models_ZNF846_profile-pos.pattern_7.n_49-vs-ZNF846-205.alignment profile-znf_b1h_alignment/ZNF846-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF846-205/ChipExo_models_ZNF846_profile-pos.pattern_8.n_49-vs-ZNF846-205.alignment profile-znf_b1h_alignment/ZNF846-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF846-205/ChipExo_models_ZNF846_profile-pos.pattern_9.n_42-vs-ZNF846-205.alignment profile-znf_b1h_alignment/ZNF846-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF850-202/pos_patterns.ENCSR756CJS_ChIP_ZNF850_HepG2_ENCSR265DEM_profile_pattern_0.n_152-vs-ZNF850-202.alignment profile-znf_b1h_alignment/ZNF850-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF850-202/pos_patterns.ENCSR756CJS_ChIP_ZNF850_HepG2_ENCSR265DEM_profile_pattern_10.n_46-vs-ZNF850-202.alignment profile-znf_b1h_alignment/ZNF850-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF850-202/pos_patterns.ENCSR756CJS_ChIP_ZNF850_HepG2_ENCSR265DEM_profile_pattern_11.n_44-vs-ZNF850-202.alignment profile-znf_b1h_alignment/ZNF850-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF850-202/pos_patterns.ENCSR756CJS_ChIP_ZNF850_HepG2_ENCSR265DEM_profile_pattern_12.n_33-vs-ZNF850-202.alignment profile-znf_b1h_alignment/ZNF850-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF850-202/pos_patterns.ENCSR756CJS_ChIP_ZNF850_HepG2_ENCSR265DEM_profile_pattern_13.n_27-vs-ZNF850-202.alignment profile-znf_b1h_alignment/ZNF850-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF850-202/pos_patterns.ENCSR756CJS_ChIP_ZNF850_HepG2_ENCSR265DEM_profile_pattern_14.n_25-vs-ZNF850-202.alignment profile-znf_b1h_alignment/ZNF850-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF850-202/pos_patterns.ENCSR756CJS_ChIP_ZNF850_HepG2_ENCSR265DEM_profile_pattern_1.n_109-vs-ZNF850-202.alignment profile-znf_b1h_alignment/ZNF850-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF850-202/pos_patterns.ENCSR756CJS_ChIP_ZNF850_HepG2_ENCSR265DEM_profile_pattern_2.n_95-vs-ZNF850-202.alignment profile-znf_b1h_alignment/ZNF850-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF850-202/pos_patterns.ENCSR756CJS_ChIP_ZNF850_HepG2_ENCSR265DEM_profile_pattern_3.n_93-vs-ZNF850-202.alignment profile-znf_b1h_alignment/ZNF850-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF850-202/pos_patterns.ENCSR756CJS_ChIP_ZNF850_HepG2_ENCSR265DEM_profile_pattern_4.n_81-vs-ZNF850-202.alignment profile-znf_b1h_alignment/ZNF850-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF850-202/pos_patterns.ENCSR756CJS_ChIP_ZNF850_HepG2_ENCSR265DEM_profile_pattern_5.n_73-vs-ZNF850-202.alignment profile-znf_b1h_alignment/ZNF850-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF850-202/pos_patterns.ENCSR756CJS_ChIP_ZNF850_HepG2_ENCSR265DEM_profile_pattern_6.n_72-vs-ZNF850-202.alignment profile-znf_b1h_alignment/ZNF850-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF850-202/pos_patterns.ENCSR756CJS_ChIP_ZNF850_HepG2_ENCSR265DEM_profile_pattern_7.n_68-vs-ZNF850-202.alignment profile-znf_b1h_alignment/ZNF850-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF850-202/pos_patterns.ENCSR756CJS_ChIP_ZNF850_HepG2_ENCSR265DEM_profile_pattern_8.n_50-vs-ZNF850-202.alignment profile-znf_b1h_alignment/ZNF850-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF850-202/pos_patterns.ENCSR756CJS_ChIP_ZNF850_HepG2_ENCSR265DEM_profile_pattern_9.n_50-vs-ZNF850-202.alignment profile-znf_b1h_alignment/ZNF850-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF85-202/ChipExo_models_ZNF85_profile-pos.pattern_0.n_67-vs-ZNF85-202.alignment profile-znf_b1h_alignment/ZNF85-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF85-202/ChipExo_models_ZNF85_profile-pos.pattern_1.n_49-vs-ZNF85-202.alignment profile-znf_b1h_alignment/ZNF85-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF85-202/ChipExo_models_ZNF85_profile-pos.pattern_2.n_48-vs-ZNF85-202.alignment profile-znf_b1h_alignment/ZNF85-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF85-202/ChipExo_models_ZNF85_profile-pos.pattern_3.n_45-vs-ZNF85-202.alignment profile-znf_b1h_alignment/ZNF85-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF85-202/Hughes_GR_models_ZNF85_profile-pos.pattern_0.n_744-vs-ZNF85-202.alignment profile-znf_b1h_alignment/ZNF85-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF85-202/Hughes_GR_models_ZNF85_profile-pos.pattern_1.n_61-vs-ZNF85-202.alignment profile-znf_b1h_alignment/ZNF85-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF85-202/Hughes_GR_models_ZNF85_profile-pos.pattern_2.n_39-vs-ZNF85-202.alignment profile-znf_b1h_alignment/ZNF85-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF85-202/Hughes_GR_models_ZNF85_profile-pos.pattern_3.n_33-vs-ZNF85-202.alignment profile-znf_b1h_alignment/ZNF85-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF860-201/ChipExo_models_ZNF860_profile-pos.pattern_0.n_162-vs-ZNF860-201.alignment profile-znf_b1h_alignment/ZNF860-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF860-201/ChipExo_models_ZNF860_profile-pos.pattern_1.n_77-vs-ZNF860-201.alignment profile-znf_b1h_alignment/ZNF860-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF860-201/ChipExo_models_ZNF860_profile-pos.pattern_2.n_34-vs-ZNF860-201.alignment profile-znf_b1h_alignment/ZNF860-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF879-201/pos_patterns.ENCSR073OBD_ChIP_ZNF879_HepG2_ENCSR392GOG_profile_pattern_4.n_277-vs-ZNF879-201.alignment profile-znf_b1h_alignment/ZNF879-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF880-202/ChipExo_models_ZNF880_profile-pos.pattern_0.n_61-vs-ZNF880-202.alignment profile-znf_b1h_alignment/ZNF880-202/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF880-202/ChipExo_models_ZNF880_profile-pos.pattern_2.n_46-vs-ZNF880-202.alignment profile-znf_b1h_alignment/ZNF880-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF880-202/ChipExo_models_ZNF880_profile-pos.pattern_3.n_39-vs-ZNF880-202.alignment profile-znf_b1h_alignment/ZNF880-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF883-205/neg_patterns.ENCSR882YYL_ChIP_ZNF883_HepG2_ENCSR497EAM_profile_pattern_0.n_75-vs-ZNF883-205.alignment profile-znf_b1h_alignment/ZNF883-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF883-205/neg_patterns.ENCSR882YYL_ChIP_ZNF883_HepG2_ENCSR497EAM_profile_pattern_1.n_60-vs-ZNF883-205.alignment profile-znf_b1h_alignment/ZNF883-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF883-205/neg_patterns.ENCSR882YYL_ChIP_ZNF883_HepG2_ENCSR497EAM_profile_pattern_2.n_48-vs-ZNF883-205.alignment profile-znf_b1h_alignment/ZNF883-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF883-205/neg_patterns.ENCSR882YYL_ChIP_ZNF883_HepG2_ENCSR497EAM_profile_pattern_3.n_48-vs-ZNF883-205.alignment profile-znf_b1h_alignment/ZNF883-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF883-205/neg_patterns.ENCSR882YYL_ChIP_ZNF883_HepG2_ENCSR497EAM_profile_pattern_4.n_44-vs-ZNF883-205.alignment profile-znf_b1h_alignment/ZNF883-205/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF883-205/pos_patterns.ENCSR882YYL_ChIP_ZNF883_HepG2_ENCSR497EAM_profile_pattern_0.n_1929-vs-ZNF883-205.alignment profile-znf_b1h_alignment/ZNF883-205/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF883-205/pos_patterns.ENCSR882YYL_ChIP_ZNF883_HepG2_ENCSR497EAM_profile_pattern_11.n_101-vs-ZNF883-205.alignment profile-znf_b1h_alignment/ZNF883-205/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF883-205/pos_patterns.ENCSR882YYL_ChIP_ZNF883_HepG2_ENCSR497EAM_profile_pattern_13.n_50-vs-ZNF883-205.alignment profile-znf_b1h_alignment/ZNF883-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF883-205/pos_patterns.ENCSR882YYL_ChIP_ZNF883_HepG2_ENCSR497EAM_profile_pattern_14.n_23-vs-ZNF883-205.alignment profile-znf_b1h_alignment/ZNF883-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF883-205/pos_patterns.ENCSR882YYL_ChIP_ZNF883_HepG2_ENCSR497EAM_profile_pattern_1.n_1928-vs-ZNF883-205.alignment profile-znf_b1h_alignment/ZNF883-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF883-205/pos_patterns.ENCSR882YYL_ChIP_ZNF883_HepG2_ENCSR497EAM_profile_pattern_2.n_1505-vs-ZNF883-205.alignment profile-znf_b1h_alignment/ZNF883-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF883-205/pos_patterns.ENCSR882YYL_ChIP_ZNF883_HepG2_ENCSR497EAM_profile_pattern_3.n_1433-vs-ZNF883-205.alignment profile-znf_b1h_alignment/ZNF883-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF883-205/pos_patterns.ENCSR882YYL_ChIP_ZNF883_HepG2_ENCSR497EAM_profile_pattern_4.n_686-vs-ZNF883-205.alignment profile-znf_b1h_alignment/ZNF883-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZNF883-205/pos_patterns.ENCSR882YYL_ChIP_ZNF883_HepG2_ENCSR497EAM_profile_pattern_5.n_466-vs-ZNF883-205.alignment profile-znf_b1h_alignment/ZNF883-205/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/AEBP2-202/neg_patterns.ENCSR769JRS_ChIP_AEBP2_HEK293_ENCSR611QNQ_profile_pattern_0.n_29-vs-AEBP2-202.alignment profile-znf_b1h_alignment/AEBP2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/AEBP2-202/neg_patterns.ENCSR769JRS_ChIP_AEBP2_HEK293_ENCSR611QNQ_profile_pattern_1.n_25-vs-AEBP2-202.alignment profile-znf_b1h_alignment/AEBP2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/AEBP2-202/neg_patterns.ENCSR769JRS_ChIP_AEBP2_HEK293_ENCSR611QNQ_profile_pattern_2.n_24-vs-AEBP2-202.alignment profile-znf_b1h_alignment/AEBP2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/AEBP2-202/pos_patterns.ENCSR769JRS_ChIP_AEBP2_HEK293_ENCSR611QNQ_profile_pattern_0.n_1400-vs-AEBP2-202.alignment profile-znf_b1h_alignment/AEBP2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/AEBP2-202/pos_patterns.ENCSR769JRS_ChIP_AEBP2_HEK293_ENCSR611QNQ_profile_pattern_1.n_254-vs-AEBP2-202.alignment profile-znf_b1h_alignment/AEBP2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/AEBP2-202/pos_patterns.ENCSR769JRS_ChIP_AEBP2_HEK293_ENCSR611QNQ_profile_pattern_2.n_121-vs-AEBP2-202.alignment profile-znf_b1h_alignment/AEBP2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/AEBP2-202/pos_patterns.ENCSR769JRS_ChIP_AEBP2_HEK293_ENCSR611QNQ_profile_pattern_3.n_100-vs-AEBP2-202.alignment profile-znf_b1h_alignment/AEBP2-202/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/AEBP2-204/neg_patterns.ENCSR769JRS_ChIP_AEBP2_HEK293_ENCSR611QNQ_profile_pattern_2.n_24-vs-AEBP2-204.alignment profile-znf_b1h_alignment/AEBP2-204/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/AEBP2-204/pos_patterns.ENCSR769JRS_ChIP_AEBP2_HEK293_ENCSR611QNQ_profile_pattern_1.n_254-vs-AEBP2-204.alignment profile-znf_b1h_alignment/AEBP2-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/AEBP2-204/pos_patterns.ENCSR769JRS_ChIP_AEBP2_HEK293_ENCSR611QNQ_profile_pattern_2.n_121-vs-AEBP2-204.alignment profile-znf_b1h_alignment/AEBP2-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/AEBP2-204/pos_patterns.ENCSR769JRS_ChIP_AEBP2_HEK293_ENCSR611QNQ_profile_pattern_3.n_100-vs-AEBP2-204.alignment profile-znf_b1h_alignment/AEBP2-204/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_0.n_8047-vs-BCL6-201.alignment profile-znf_b1h_alignment/BCL6-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_12.n_504-vs-BCL6-201.alignment profile-znf_b1h_alignment/BCL6-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_24.n_41-vs-BCL6-201.alignment profile-znf_b1h_alignment/BCL6-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_26.n_39-vs-BCL6-201.alignment profile-znf_b1h_alignment/BCL6-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_29.n_34-vs-BCL6-201.alignment profile-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_2.n_4982-vs-BCL6-201.alignment profile-znf_b1h_alignment/BCL6-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_31.n_31-vs-BCL6-201.alignment profile-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_32.n_27-vs-BCL6-201.alignment profile-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_33.n_26-vs-BCL6-201.alignment profile-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_34.n_24-vs-BCL6-201.alignment profile-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_35.n_20-vs-BCL6-201.alignment profile-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_3.n_4338-vs-BCL6-201.alignment profile-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_4.n_2856-vs-BCL6-201.alignment profile-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_5.n_2009-vs-BCL6-201.alignment profile-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_6.n_1397-vs-BCL6-201.alignment profile-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_7.n_1105-vs-BCL6-201.alignment profile-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_8.n_986-vs-BCL6-201.alignment profile-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_9.n_749-vs-BCL6-201.alignment profile-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR802AHH_ChIP_BCL6_K562_ENCSR852ZEW_profile_pattern_0.n_1098-vs-BCL6-201.alignment profile-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR802AHH_ChIP_BCL6_K562_ENCSR852ZEW_profile_pattern_10.n_52-vs-BCL6-201.alignment profile-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR802AHH_ChIP_BCL6_K562_ENCSR852ZEW_profile_pattern_11.n_23-vs-BCL6-201.alignment profile-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR802AHH_ChIP_BCL6_K562_ENCSR852ZEW_profile_pattern_1.n_242-vs-BCL6-201.alignment profile-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR802AHH_ChIP_BCL6_K562_ENCSR852ZEW_profile_pattern_2.n_167-vs-BCL6-201.alignment profile-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR802AHH_ChIP_BCL6_K562_ENCSR852ZEW_profile_pattern_3.n_152-vs-BCL6-201.alignment profile-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR802AHH_ChIP_BCL6_K562_ENCSR852ZEW_profile_pattern_4.n_100-vs-BCL6-201.alignment profile-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR802AHH_ChIP_BCL6_K562_ENCSR852ZEW_profile_pattern_5.n_97-vs-BCL6-201.alignment profile-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR802AHH_ChIP_BCL6_K562_ENCSR852ZEW_profile_pattern_6.n_79-vs-BCL6-201.alignment profile-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR802AHH_ChIP_BCL6_K562_ENCSR852ZEW_profile_pattern_7.n_78-vs-BCL6-201.alignment profile-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR802AHH_ChIP_BCL6_K562_ENCSR852ZEW_profile_pattern_8.n_74-vs-BCL6-201.alignment profile-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-201/pos_patterns.ENCSR802AHH_ChIP_BCL6_K562_ENCSR852ZEW_profile_pattern_9.n_56-vs-BCL6-201.alignment profile-znf_b1h_alignment/BCL6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-206/neg_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_0.n_1072-vs-BCL6-206.alignment profile-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-206/neg_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_10.n_47-vs-BCL6-206.alignment profile-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-206/neg_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_11.n_43-vs-BCL6-206.alignment profile-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-206/neg_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_12.n_39-vs-BCL6-206.alignment profile-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-206/neg_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_13.n_25-vs-BCL6-206.alignment profile-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-206/neg_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_14.n_20-vs-BCL6-206.alignment profile-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-206/neg_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_15.n_20-vs-BCL6-206.alignment profile-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-206/neg_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_1.n_1005-vs-BCL6-206.alignment profile-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-206/neg_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_2.n_797-vs-BCL6-206.alignment profile-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-206/neg_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_3.n_797-vs-BCL6-206.alignment profile-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-206/neg_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_4.n_589-vs-BCL6-206.alignment profile-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-206/neg_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_5.n_115-vs-BCL6-206.alignment profile-znf_b1h_alignment/BCL6-206/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_16.n_177-vs-BCL6-206.alignment profile-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_17.n_157-vs-BCL6-206.alignment profile-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_18.n_157-vs-BCL6-206.alignment profile-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_19.n_130-vs-BCL6-206.alignment profile-znf_b1h_alignment/BCL6-206/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_20.n_122-vs-BCL6-206.alignment profile-znf_b1h_alignment/BCL6-206/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_22.n_46-vs-BCL6-206.alignment profile-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_23.n_45-vs-BCL6-206.alignment profile-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_24.n_41-vs-BCL6-206.alignment profile-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_25.n_40-vs-BCL6-206.alignment profile-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_26.n_39-vs-BCL6-206.alignment profile-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_27.n_39-vs-BCL6-206.alignment profile-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_28.n_37-vs-BCL6-206.alignment profile-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_29.n_34-vs-BCL6-206.alignment profile-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_2.n_4982-vs-BCL6-206.alignment profile-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_30.n_34-vs-BCL6-206.alignment profile-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_31.n_31-vs-BCL6-206.alignment profile-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_32.n_27-vs-BCL6-206.alignment profile-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_33.n_26-vs-BCL6-206.alignment profile-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_34.n_24-vs-BCL6-206.alignment profile-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_35.n_20-vs-BCL6-206.alignment profile-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_3.n_4338-vs-BCL6-206.alignment profile-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_4.n_2856-vs-BCL6-206.alignment profile-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_5.n_2009-vs-BCL6-206.alignment profile-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_6.n_1397-vs-BCL6-206.alignment profile-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_7.n_1105-vs-BCL6-206.alignment profile-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_8.n_986-vs-BCL6-206.alignment profile-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR759BDG_ChIP_BCL6_HepG2_ENCSR679ZPP_profile_pattern_9.n_749-vs-BCL6-206.alignment profile-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR802AHH_ChIP_BCL6_K562_ENCSR852ZEW_profile_pattern_0.n_1098-vs-BCL6-206.alignment profile-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR802AHH_ChIP_BCL6_K562_ENCSR852ZEW_profile_pattern_10.n_52-vs-BCL6-206.alignment profile-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR802AHH_ChIP_BCL6_K562_ENCSR852ZEW_profile_pattern_11.n_23-vs-BCL6-206.alignment profile-znf_b1h_alignment/BCL6-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR802AHH_ChIP_BCL6_K562_ENCSR852ZEW_profile_pattern_1.n_242-vs-BCL6-206.alignment profile-znf_b1h_alignment/BCL6-206/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/BCL6-206/pos_patterns.ENCSR802AHH_ChIP_BCL6_K562_ENCSR852ZEW_profile_pattern_3.n_152-vs-BCL6-206.alignment profile-znf_b1h_alignment/BCL6-206/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/DZIP1-206/pos_patterns.ENCSR895KNN_ChIP_DZIP1_HepG2_ENCSR060XJL_profile_pattern_1.n_757-vs-DZIP1-206.alignment profile-znf_b1h_alignment/DZIP1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/DZIP1-206/pos_patterns.ENCSR895KNN_ChIP_DZIP1_HepG2_ENCSR060XJL_profile_pattern_2.n_636-vs-DZIP1-206.alignment profile-znf_b1h_alignment/DZIP1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/DZIP1-206/pos_patterns.ENCSR895KNN_ChIP_DZIP1_HepG2_ENCSR060XJL_profile_pattern_3.n_461-vs-DZIP1-206.alignment profile-znf_b1h_alignment/DZIP1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/DZIP1-206/pos_patterns.ENCSR895KNN_ChIP_DZIP1_HepG2_ENCSR060XJL_profile_pattern_4.n_390-vs-DZIP1-206.alignment profile-znf_b1h_alignment/DZIP1-206/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/DZIP1-206/pos_patterns.ENCSR895KNN_ChIP_DZIP1_HepG2_ENCSR060XJL_profile_pattern_5.n_354-vs-DZIP1-206.alignment profile-znf_b1h_alignment/DZIP1-206/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/E4F1-201/neg_patterns.ENCSR003GUC_ChIP_E4F1_K562_ENCSR283UAU_profile_pattern_13.n_24-vs-E4F1-201.alignment profile-znf_b1h_alignment/E4F1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/E4F1-201/neg_patterns.ENCSR003GUC_ChIP_E4F1_K562_ENCSR283UAU_profile_pattern_14.n_22-vs-E4F1-201.alignment profile-znf_b1h_alignment/E4F1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/E4F1-201/neg_patterns.ENCSR003GUC_ChIP_E4F1_K562_ENCSR283UAU_profile_pattern_16.n_20-vs-E4F1-201.alignment profile-znf_b1h_alignment/E4F1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/FEZF1-202/neg_patterns.ENCSR827NWO_ChIP_FEZF1_HEK293_ENCSR722ZLL_profile_pattern_2.n_33-vs-FEZF1-202.alignment profile-znf_b1h_alignment/FEZF1-202/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/FEZF1-202/neg_patterns.ENCSR827NWO_ChIP_FEZF1_HEK293_ENCSR722ZLL_profile_pattern_5.n_21-vs-FEZF1-202.alignment profile-znf_b1h_alignment/FEZF1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/FEZF1-202/pos_patterns.ENCSR827NWO_ChIP_FEZF1_HEK293_ENCSR722ZLL_profile_pattern_0.n_9188-vs-FEZF1-202.alignment profile-znf_b1h_alignment/FEZF1-202/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/FEZF1-202/pos_patterns.ENCSR827NWO_ChIP_FEZF1_HEK293_ENCSR722ZLL_profile_pattern_11.n_231-vs-FEZF1-202.alignment profile-znf_b1h_alignment/FEZF1-202/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/FEZF1-202/pos_patterns.ENCSR827NWO_ChIP_FEZF1_HEK293_ENCSR722ZLL_profile_pattern_2.n_5644-vs-FEZF1-202.alignment profile-znf_b1h_alignment/FEZF1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/FEZF1-202/pos_patterns.ENCSR827NWO_ChIP_FEZF1_HEK293_ENCSR722ZLL_profile_pattern_3.n_3589-vs-FEZF1-202.alignment profile-znf_b1h_alignment/FEZF1-202/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1-201/neg_patterns.ENCSR849FVL_ChIP_GFI1_HepG2_ENCSR870DPI_profile_pattern_24.n_21-vs-GFI1-201.alignment profile-znf_b1h_alignment/GFI1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1-201/neg_patterns.ENCSR849FVL_ChIP_GFI1_HepG2_ENCSR870DPI_profile_pattern_2.n_646-vs-GFI1-201.alignment profile-znf_b1h_alignment/GFI1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1-201/neg_patterns.ENCSR849FVL_ChIP_GFI1_HepG2_ENCSR870DPI_profile_pattern_3.n_345-vs-GFI1-201.alignment profile-znf_b1h_alignment/GFI1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1-201/neg_patterns.ENCSR849FVL_ChIP_GFI1_HepG2_ENCSR870DPI_profile_pattern_4.n_154-vs-GFI1-201.alignment profile-znf_b1h_alignment/GFI1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1-201/neg_patterns.ENCSR849FVL_ChIP_GFI1_HepG2_ENCSR870DPI_profile_pattern_5.n_136-vs-GFI1-201.alignment profile-znf_b1h_alignment/GFI1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1-201/neg_patterns.ENCSR849FVL_ChIP_GFI1_HepG2_ENCSR870DPI_profile_pattern_6.n_90-vs-GFI1-201.alignment profile-znf_b1h_alignment/GFI1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1-201/neg_patterns.ENCSR849FVL_ChIP_GFI1_HepG2_ENCSR870DPI_profile_pattern_7.n_79-vs-GFI1-201.alignment profile-znf_b1h_alignment/GFI1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1-201/neg_patterns.ENCSR849FVL_ChIP_GFI1_HepG2_ENCSR870DPI_profile_pattern_8.n_79-vs-GFI1-201.alignment profile-znf_b1h_alignment/GFI1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1-201/neg_patterns.ENCSR849FVL_ChIP_GFI1_HepG2_ENCSR870DPI_profile_pattern_9.n_63-vs-GFI1-201.alignment profile-znf_b1h_alignment/GFI1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1-201/pos_patterns.ENCSR849FVL_ChIP_GFI1_HepG2_ENCSR870DPI_profile_pattern_0.n_7014-vs-GFI1-201.alignment profile-znf_b1h_alignment/GFI1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1-201/pos_patterns.ENCSR849FVL_ChIP_GFI1_HepG2_ENCSR870DPI_profile_pattern_10.n_330-vs-GFI1-201.alignment profile-znf_b1h_alignment/GFI1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1-201/pos_patterns.ENCSR849FVL_ChIP_GFI1_HepG2_ENCSR870DPI_profile_pattern_11.n_316-vs-GFI1-201.alignment profile-znf_b1h_alignment/GFI1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1-201/pos_patterns.ENCSR849FVL_ChIP_GFI1_HepG2_ENCSR870DPI_profile_pattern_12.n_283-vs-GFI1-201.alignment profile-znf_b1h_alignment/GFI1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1-201/pos_patterns.ENCSR849FVL_ChIP_GFI1_HepG2_ENCSR870DPI_profile_pattern_13.n_283-vs-GFI1-201.alignment profile-znf_b1h_alignment/GFI1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1-201/pos_patterns.ENCSR849FVL_ChIP_GFI1_HepG2_ENCSR870DPI_profile_pattern_14.n_199-vs-GFI1-201.alignment profile-znf_b1h_alignment/GFI1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1-201/pos_patterns.ENCSR849FVL_ChIP_GFI1_HepG2_ENCSR870DPI_profile_pattern_15.n_180-vs-GFI1-201.alignment profile-znf_b1h_alignment/GFI1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1-201/pos_patterns.ENCSR849FVL_ChIP_GFI1_HepG2_ENCSR870DPI_profile_pattern_16.n_119-vs-GFI1-201.alignment profile-znf_b1h_alignment/GFI1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1-201/pos_patterns.ENCSR849FVL_ChIP_GFI1_HepG2_ENCSR870DPI_profile_pattern_17.n_101-vs-GFI1-201.alignment profile-znf_b1h_alignment/GFI1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1-201/pos_patterns.ENCSR849FVL_ChIP_GFI1_HepG2_ENCSR870DPI_profile_pattern_18.n_88-vs-GFI1-201.alignment profile-znf_b1h_alignment/GFI1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1-201/pos_patterns.ENCSR849FVL_ChIP_GFI1_HepG2_ENCSR870DPI_profile_pattern_19.n_61-vs-GFI1-201.alignment profile-znf_b1h_alignment/GFI1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1-201/pos_patterns.ENCSR849FVL_ChIP_GFI1_HepG2_ENCSR870DPI_profile_pattern_1.n_4825-vs-GFI1-201.alignment profile-znf_b1h_alignment/GFI1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1-201/pos_patterns.ENCSR849FVL_ChIP_GFI1_HepG2_ENCSR870DPI_profile_pattern_20.n_60-vs-GFI1-201.alignment profile-znf_b1h_alignment/GFI1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1-201/pos_patterns.ENCSR849FVL_ChIP_GFI1_HepG2_ENCSR870DPI_profile_pattern_21.n_56-vs-GFI1-201.alignment profile-znf_b1h_alignment/GFI1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1-201/pos_patterns.ENCSR849FVL_ChIP_GFI1_HepG2_ENCSR870DPI_profile_pattern_22.n_56-vs-GFI1-201.alignment profile-znf_b1h_alignment/GFI1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1-201/pos_patterns.ENCSR849FVL_ChIP_GFI1_HepG2_ENCSR870DPI_profile_pattern_23.n_44-vs-GFI1-201.alignment profile-znf_b1h_alignment/GFI1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1-201/pos_patterns.ENCSR849FVL_ChIP_GFI1_HepG2_ENCSR870DPI_profile_pattern_24.n_28-vs-GFI1-201.alignment profile-znf_b1h_alignment/GFI1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1-201/pos_patterns.ENCSR849FVL_ChIP_GFI1_HepG2_ENCSR870DPI_profile_pattern_25.n_23-vs-GFI1-201.alignment profile-znf_b1h_alignment/GFI1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1-201/pos_patterns.ENCSR849FVL_ChIP_GFI1_HepG2_ENCSR870DPI_profile_pattern_26.n_20-vs-GFI1-201.alignment profile-znf_b1h_alignment/GFI1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1-201/pos_patterns.ENCSR849FVL_ChIP_GFI1_HepG2_ENCSR870DPI_profile_pattern_2.n_3514-vs-GFI1-201.alignment profile-znf_b1h_alignment/GFI1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1-201/pos_patterns.ENCSR849FVL_ChIP_GFI1_HepG2_ENCSR870DPI_profile_pattern_3.n_3492-vs-GFI1-201.alignment profile-znf_b1h_alignment/GFI1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1-201/pos_patterns.ENCSR849FVL_ChIP_GFI1_HepG2_ENCSR870DPI_profile_pattern_5.n_1098-vs-GFI1-201.alignment profile-znf_b1h_alignment/GFI1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1B-203/neg_patterns.ENCSR445PDR_ChIP_GFI1B_HEK293_ENCSR026EBR_profile_pattern_0.n_36-vs-GFI1B-203.alignment profile-znf_b1h_alignment/GFI1B-203/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1B-203/pos_patterns.ENCSR445PDR_ChIP_GFI1B_HEK293_ENCSR026EBR_profile_pattern_1.n_1212-vs-GFI1B-203.alignment profile-znf_b1h_alignment/GFI1B-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1B-203/pos_patterns.ENCSR445PDR_ChIP_GFI1B_HEK293_ENCSR026EBR_profile_pattern_2.n_955-vs-GFI1B-203.alignment profile-znf_b1h_alignment/GFI1B-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1B-203/pos_patterns.ENCSR445PDR_ChIP_GFI1B_HEK293_ENCSR026EBR_profile_pattern_3.n_511-vs-GFI1B-203.alignment profile-znf_b1h_alignment/GFI1B-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1B-203/pos_patterns.ENCSR445PDR_ChIP_GFI1B_HEK293_ENCSR026EBR_profile_pattern_4.n_381-vs-GFI1B-203.alignment profile-znf_b1h_alignment/GFI1B-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1B-203/pos_patterns.ENCSR445PDR_ChIP_GFI1B_HEK293_ENCSR026EBR_profile_pattern_5.n_371-vs-GFI1B-203.alignment profile-znf_b1h_alignment/GFI1B-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1B-203/pos_patterns.ENCSR445PDR_ChIP_GFI1B_HEK293_ENCSR026EBR_profile_pattern_6.n_360-vs-GFI1B-203.alignment profile-znf_b1h_alignment/GFI1B-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1B-203/pos_patterns.ENCSR445PDR_ChIP_GFI1B_HEK293_ENCSR026EBR_profile_pattern_7.n_206-vs-GFI1B-203.alignment profile-znf_b1h_alignment/GFI1B-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1B-203/pos_patterns.ENCSR445PDR_ChIP_GFI1B_HEK293_ENCSR026EBR_profile_pattern_8.n_115-vs-GFI1B-203.alignment profile-znf_b1h_alignment/GFI1B-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1B-203/pos_patterns.ENCSR445PDR_ChIP_GFI1B_HEK293_ENCSR026EBR_profile_pattern_9.n_86-vs-GFI1B-203.alignment profile-znf_b1h_alignment/GFI1B-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1B-207/neg_patterns.ENCSR445PDR_ChIP_GFI1B_HEK293_ENCSR026EBR_profile_pattern_0.n_36-vs-GFI1B-207.alignment profile-znf_b1h_alignment/GFI1B-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1B-207/neg_patterns.ENCSR445PDR_ChIP_GFI1B_HEK293_ENCSR026EBR_profile_pattern_1.n_30-vs-GFI1B-207.alignment profile-znf_b1h_alignment/GFI1B-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1B-207/neg_patterns.ENCSR445PDR_ChIP_GFI1B_HEK293_ENCSR026EBR_profile_pattern_2.n_27-vs-GFI1B-207.alignment profile-znf_b1h_alignment/GFI1B-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1B-207/neg_patterns.ENCSR445PDR_ChIP_GFI1B_HEK293_ENCSR026EBR_profile_pattern_3.n_26-vs-GFI1B-207.alignment profile-znf_b1h_alignment/GFI1B-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1B-207/neg_patterns.ENCSR445PDR_ChIP_GFI1B_HEK293_ENCSR026EBR_profile_pattern_4.n_25-vs-GFI1B-207.alignment profile-znf_b1h_alignment/GFI1B-207/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1B-207/pos_patterns.ENCSR445PDR_ChIP_GFI1B_HEK293_ENCSR026EBR_profile_pattern_1.n_1212-vs-GFI1B-207.alignment profile-znf_b1h_alignment/GFI1B-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1B-207/pos_patterns.ENCSR445PDR_ChIP_GFI1B_HEK293_ENCSR026EBR_profile_pattern_2.n_955-vs-GFI1B-207.alignment profile-znf_b1h_alignment/GFI1B-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1B-207/pos_patterns.ENCSR445PDR_ChIP_GFI1B_HEK293_ENCSR026EBR_profile_pattern_3.n_511-vs-GFI1B-207.alignment profile-znf_b1h_alignment/GFI1B-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1B-207/pos_patterns.ENCSR445PDR_ChIP_GFI1B_HEK293_ENCSR026EBR_profile_pattern_4.n_381-vs-GFI1B-207.alignment profile-znf_b1h_alignment/GFI1B-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1B-207/pos_patterns.ENCSR445PDR_ChIP_GFI1B_HEK293_ENCSR026EBR_profile_pattern_5.n_371-vs-GFI1B-207.alignment profile-znf_b1h_alignment/GFI1B-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1B-207/pos_patterns.ENCSR445PDR_ChIP_GFI1B_HEK293_ENCSR026EBR_profile_pattern_6.n_360-vs-GFI1B-207.alignment profile-znf_b1h_alignment/GFI1B-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1B-207/pos_patterns.ENCSR445PDR_ChIP_GFI1B_HEK293_ENCSR026EBR_profile_pattern_7.n_206-vs-GFI1B-207.alignment profile-znf_b1h_alignment/GFI1B-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1B-207/pos_patterns.ENCSR445PDR_ChIP_GFI1B_HEK293_ENCSR026EBR_profile_pattern_8.n_115-vs-GFI1B-207.alignment profile-znf_b1h_alignment/GFI1B-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GFI1B-207/pos_patterns.ENCSR445PDR_ChIP_GFI1B_HEK293_ENCSR026EBR_profile_pattern_9.n_86-vs-GFI1B-207.alignment profile-znf_b1h_alignment/GFI1B-207/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/GLI2-201/pos_patterns.ENCSR978EQY_ChIP_GLI2_HEK293_ENCSR731COQ_profile_pattern_0.n_1296-vs-GLI2-201.alignment profile-znf_b1h_alignment/GLI2-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HIC1-201/pos_patterns.ENCSR803GYT_ChIP_HIC1_HEK293_ENCSR970AAN_profile_pattern_9.n_249-vs-HIC1-201.alignment profile-znf_b1h_alignment/HIC1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-201/neg_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_profile_pattern_1.n_49-vs-HINFP-201.alignment profile-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-201/neg_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_profile_pattern_2.n_39-vs-HINFP-201.alignment profile-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-201/neg_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_profile_pattern_3.n_34-vs-HINFP-201.alignment profile-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-201/neg_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_profile_pattern_4.n_28-vs-HINFP-201.alignment profile-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-201/neg_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_profile_pattern_5.n_22-vs-HINFP-201.alignment profile-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_profile_pattern_0.n_2875-vs-HINFP-201.alignment profile-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_profile_pattern_10.n_97-vs-HINFP-201.alignment profile-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_profile_pattern_11.n_71-vs-HINFP-201.alignment profile-znf_b1h_alignment/HINFP-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_profile_pattern_13.n_25-vs-HINFP-201.alignment profile-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_profile_pattern_1.n_1412-vs-HINFP-201.alignment profile-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_profile_pattern_2.n_1081-vs-HINFP-201.alignment profile-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_profile_pattern_3.n_483-vs-HINFP-201.alignment profile-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_profile_pattern_4.n_317-vs-HINFP-201.alignment profile-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_profile_pattern_5.n_138-vs-HINFP-201.alignment profile-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_profile_pattern_6.n_120-vs-HINFP-201.alignment profile-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_profile_pattern_7.n_115-vs-HINFP-201.alignment profile-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_profile_pattern_8.n_99-vs-HINFP-201.alignment profile-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_profile_pattern_9.n_97-vs-HINFP-201.alignment profile-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_profile_pattern_0.n_2425-vs-HINFP-201.alignment profile-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_profile_pattern_10.n_139-vs-HINFP-201.alignment profile-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_profile_pattern_11.n_139-vs-HINFP-201.alignment profile-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_profile_pattern_12.n_69-vs-HINFP-201.alignment profile-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_profile_pattern_13.n_26-vs-HINFP-201.alignment profile-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_profile_pattern_14.n_24-vs-HINFP-201.alignment profile-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_profile_pattern_15.n_20-vs-HINFP-201.alignment profile-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_profile_pattern_1.n_2089-vs-HINFP-201.alignment profile-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_profile_pattern_2.n_988-vs-HINFP-201.alignment profile-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_profile_pattern_3.n_826-vs-HINFP-201.alignment profile-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_profile_pattern_4.n_386-vs-HINFP-201.alignment profile-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_profile_pattern_5.n_334-vs-HINFP-201.alignment profile-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_profile_pattern_6.n_249-vs-HINFP-201.alignment profile-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_profile_pattern_7.n_231-vs-HINFP-201.alignment profile-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_profile_pattern_8.n_161-vs-HINFP-201.alignment profile-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-201/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_profile_pattern_9.n_143-vs-HINFP-201.alignment profile-znf_b1h_alignment/HINFP-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/neg_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_profile_pattern_0.n_915-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/neg_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_profile_pattern_1.n_360-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/neg_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_profile_pattern_2.n_233-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/neg_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_profile_pattern_3.n_211-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/neg_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_profile_pattern_4.n_117-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/neg_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_profile_pattern_5.n_113-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/neg_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_profile_pattern_6.n_58-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/neg_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_profile_pattern_7.n_41-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/neg_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_profile_pattern_8.n_31-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/neg_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_profile_pattern_9.n_24-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/neg_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_profile_pattern_0.n_66-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/neg_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_profile_pattern_1.n_49-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/neg_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_profile_pattern_2.n_39-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/neg_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_profile_pattern_3.n_34-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/neg_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_profile_pattern_4.n_28-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/neg_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_profile_pattern_5.n_22-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_profile_pattern_0.n_2875-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_profile_pattern_10.n_97-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_profile_pattern_11.n_71-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_profile_pattern_12.n_28-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_profile_pattern_13.n_25-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_profile_pattern_1.n_1412-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_profile_pattern_2.n_1081-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_profile_pattern_3.n_483-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_profile_pattern_4.n_317-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_profile_pattern_5.n_138-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_profile_pattern_6.n_120-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_profile_pattern_7.n_115-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_profile_pattern_8.n_99-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR619GFP_ChIP_HINFP_K562_ENCSR727YCU_profile_pattern_9.n_97-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_profile_pattern_0.n_2425-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_profile_pattern_10.n_139-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_profile_pattern_11.n_139-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_profile_pattern_12.n_69-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_profile_pattern_13.n_26-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_profile_pattern_14.n_24-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_profile_pattern_15.n_20-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_profile_pattern_1.n_2089-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_profile_pattern_2.n_988-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_profile_pattern_3.n_826-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_profile_pattern_4.n_386-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_profile_pattern_5.n_334-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_profile_pattern_6.n_249-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_profile_pattern_7.n_231-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_profile_pattern_8.n_161-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HINFP-205/pos_patterns.ENCSR621PAN_ChIP_HINFP_HepG2_ENCSR326BKK_profile_pattern_9.n_143-vs-HINFP-205.alignment profile-znf_b1h_alignment/HINFP-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HIVEP1-201/neg_patterns.ENCSR697WMX_ChIP_HIVEP1_HepG2_ENCSR272FZX_profile_pattern_0.n_79-vs-HIVEP1-201.alignment profile-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HIVEP1-201/neg_patterns.ENCSR697WMX_ChIP_HIVEP1_HepG2_ENCSR272FZX_profile_pattern_1.n_64-vs-HIVEP1-201.alignment profile-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HIVEP1-201/neg_patterns.ENCSR697WMX_ChIP_HIVEP1_HepG2_ENCSR272FZX_profile_pattern_2.n_43-vs-HIVEP1-201.alignment profile-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HIVEP1-201/neg_patterns.ENCSR697WMX_ChIP_HIVEP1_HepG2_ENCSR272FZX_profile_pattern_3.n_32-vs-HIVEP1-201.alignment profile-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HIVEP1-201/neg_patterns.ENCSR697WMX_ChIP_HIVEP1_HepG2_ENCSR272FZX_profile_pattern_4.n_30-vs-HIVEP1-201.alignment profile-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HIVEP1-201/neg_patterns.ENCSR697WMX_ChIP_HIVEP1_HepG2_ENCSR272FZX_profile_pattern_5.n_27-vs-HIVEP1-201.alignment profile-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HIVEP1-201/neg_patterns.ENCSR697WMX_ChIP_HIVEP1_HepG2_ENCSR272FZX_profile_pattern_6.n_24-vs-HIVEP1-201.alignment profile-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HIVEP1-201/neg_patterns.ENCSR947PJZ_ChIP_HIVEP1_K562_ENCSR034TCM_profile_pattern_0.n_451-vs-HIVEP1-201.alignment profile-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HIVEP1-201/neg_patterns.ENCSR947PJZ_ChIP_HIVEP1_K562_ENCSR034TCM_profile_pattern_10.n_43-vs-HIVEP1-201.alignment profile-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HIVEP1-201/neg_patterns.ENCSR947PJZ_ChIP_HIVEP1_K562_ENCSR034TCM_profile_pattern_11.n_31-vs-HIVEP1-201.alignment profile-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HIVEP1-201/neg_patterns.ENCSR947PJZ_ChIP_HIVEP1_K562_ENCSR034TCM_profile_pattern_12.n_30-vs-HIVEP1-201.alignment profile-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HIVEP1-201/neg_patterns.ENCSR947PJZ_ChIP_HIVEP1_K562_ENCSR034TCM_profile_pattern_13.n_29-vs-HIVEP1-201.alignment profile-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HIVEP1-201/neg_patterns.ENCSR947PJZ_ChIP_HIVEP1_K562_ENCSR034TCM_profile_pattern_14.n_24-vs-HIVEP1-201.alignment profile-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HIVEP1-201/neg_patterns.ENCSR947PJZ_ChIP_HIVEP1_K562_ENCSR034TCM_profile_pattern_1.n_109-vs-HIVEP1-201.alignment profile-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HIVEP1-201/neg_patterns.ENCSR947PJZ_ChIP_HIVEP1_K562_ENCSR034TCM_profile_pattern_2.n_98-vs-HIVEP1-201.alignment profile-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HIVEP1-201/neg_patterns.ENCSR947PJZ_ChIP_HIVEP1_K562_ENCSR034TCM_profile_pattern_3.n_83-vs-HIVEP1-201.alignment profile-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HIVEP1-201/neg_patterns.ENCSR947PJZ_ChIP_HIVEP1_K562_ENCSR034TCM_profile_pattern_4.n_72-vs-HIVEP1-201.alignment profile-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HIVEP1-201/neg_patterns.ENCSR947PJZ_ChIP_HIVEP1_K562_ENCSR034TCM_profile_pattern_5.n_66-vs-HIVEP1-201.alignment profile-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HIVEP1-201/neg_patterns.ENCSR947PJZ_ChIP_HIVEP1_K562_ENCSR034TCM_profile_pattern_6.n_62-vs-HIVEP1-201.alignment profile-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HIVEP1-201/neg_patterns.ENCSR947PJZ_ChIP_HIVEP1_K562_ENCSR034TCM_profile_pattern_7.n_62-vs-HIVEP1-201.alignment profile-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HIVEP1-201/neg_patterns.ENCSR947PJZ_ChIP_HIVEP1_K562_ENCSR034TCM_profile_pattern_8.n_52-vs-HIVEP1-201.alignment profile-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HIVEP1-201/neg_patterns.ENCSR947PJZ_ChIP_HIVEP1_K562_ENCSR034TCM_profile_pattern_9.n_45-vs-HIVEP1-201.alignment profile-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HIVEP1-201/pos_patterns.ENCSR697WMX_ChIP_HIVEP1_HepG2_ENCSR272FZX_profile_pattern_0.n_2091-vs-HIVEP1-201.alignment profile-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HIVEP1-201/pos_patterns.ENCSR697WMX_ChIP_HIVEP1_HepG2_ENCSR272FZX_profile_pattern_10.n_122-vs-HIVEP1-201.alignment profile-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HIVEP1-201/pos_patterns.ENCSR697WMX_ChIP_HIVEP1_HepG2_ENCSR272FZX_profile_pattern_11.n_111-vs-HIVEP1-201.alignment profile-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HIVEP1-201/pos_patterns.ENCSR697WMX_ChIP_HIVEP1_HepG2_ENCSR272FZX_profile_pattern_12.n_108-vs-HIVEP1-201.alignment profile-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HIVEP1-201/pos_patterns.ENCSR697WMX_ChIP_HIVEP1_HepG2_ENCSR272FZX_profile_pattern_13.n_79-vs-HIVEP1-201.alignment profile-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HIVEP1-201/pos_patterns.ENCSR697WMX_ChIP_HIVEP1_HepG2_ENCSR272FZX_profile_pattern_14.n_52-vs-HIVEP1-201.alignment profile-znf_b1h_alignment/HIVEP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HIVEP1-201/pos_patterns.ENCSR697WMX_ChIP_HIVEP1_HepG2_ENCSR272FZX_profile_pattern_15.n_51-vs-HIVEP1-201.alignment profile-znf_b1h_alignment/HIVEP1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/HIVEP1-201/pos_patterns.ENCSR697WMX_ChIP_HIVEP1_HepG2_ENCSR272FZX_profile_pattern_17.n_36-vs-HIVEP1-201.alignment profile-znf_b1h_alignment/HIVEP1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/IKZF2-201/pos_patterns.ENCSR822AHX_ChIP_IKZF2_GM12878_ENCSR099EKK_profile_pattern_21.n_35-vs-IKZF2-201.alignment profile-znf_b1h_alignment/IKZF2-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/IKZF3-204/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_profile_pattern_14.n_525-vs-IKZF3-204.alignment profile-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/IKZF3-204/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_profile_pattern_15.n_472-vs-IKZF3-204.alignment profile-znf_b1h_alignment/IKZF3-204/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/IKZF3-204/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_profile_pattern_17.n_413-vs-IKZF3-204.alignment profile-znf_b1h_alignment/IKZF3-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/IKZF3-204/pos_patterns.ENCSR304AMN_ChIP_IKZF3_HEK293_ENCSR861LIN_profile_pattern_18.n_403-vs-IKZF3-204.alignment profile-znf_b1h_alignment/IKZF3-204/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/KLF6-206/neg_patterns.ENCSR297CGF_ChIP_KLF6_K562_ENCSR721YCL_profile_pattern_0.n_415-vs-KLF6-206.alignment profile-znf_b1h_alignment/KLF6-206/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/neg_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_profile_pattern_6.n_30-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/neg_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_profile_pattern_7.n_27-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/neg_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_profile_pattern_0.n_120-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/neg_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_profile_pattern_1.n_52-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/neg_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_profile_pattern_2.n_40-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/neg_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_profile_pattern_3.n_24-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/neg_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_profile_pattern_4.n_22-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/neg_patterns.ENCSR290SSQ_ChIP_MAZ_HEK293_ENCSR821GPM_profile_pattern_0.n_107-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/neg_patterns.ENCSR290SSQ_ChIP_MAZ_HEK293_ENCSR821GPM_profile_pattern_1.n_71-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/neg_patterns.ENCSR290SSQ_ChIP_MAZ_HEK293_ENCSR821GPM_profile_pattern_2.n_59-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/neg_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_profile_pattern_0.n_490-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/neg_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_profile_pattern_1.n_32-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/neg_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_profile_pattern_2.n_25-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/neg_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_profile_pattern_3.n_21-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/neg_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_profile_pattern_0.n_24-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/neg_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_profile_pattern_1.n_22-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/neg_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_profile_pattern_2.n_21-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/neg_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_profile_pattern_0.n_41-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/neg_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_profile_pattern_1.n_26-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_profile_pattern_0.n_8530-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_profile_pattern_10.n_66-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_profile_pattern_11.n_58-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_profile_pattern_12.n_57-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_profile_pattern_13.n_55-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_profile_pattern_14.n_54-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_profile_pattern_15.n_52-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_profile_pattern_16.n_41-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_profile_pattern_17.n_40-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_profile_pattern_18.n_35-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_profile_pattern_19.n_25-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_profile_pattern_1.n_4074-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_profile_pattern_20.n_21-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_profile_pattern_2.n_2572-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_profile_pattern_3.n_734-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_profile_pattern_4.n_623-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_profile_pattern_5.n_584-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_profile_pattern_6.n_404-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_profile_pattern_7.n_230-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_profile_pattern_8.n_135-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_profile_pattern_9.n_79-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_profile_pattern_0.n_4447-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_profile_pattern_10.n_59-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_profile_pattern_11.n_31-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_profile_pattern_12.n_22-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_profile_pattern_13.n_20-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_profile_pattern_1.n_3123-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_profile_pattern_2.n_1627-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_profile_pattern_3.n_949-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_profile_pattern_4.n_750-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_profile_pattern_5.n_486-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_profile_pattern_6.n_294-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_profile_pattern_7.n_191-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_profile_pattern_8.n_92-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_profile_pattern_9.n_69-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EDN_ChIP_MAZ_HepG2_ENCSR364YEH_profile_pattern_0.n_6981-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EDN_ChIP_MAZ_HepG2_ENCSR364YEH_profile_pattern_1.n_2324-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EDN_ChIP_MAZ_HepG2_ENCSR364YEH_profile_pattern_2.n_368-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EDN_ChIP_MAZ_HepG2_ENCSR364YEH_profile_pattern_3.n_301-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EDN_ChIP_MAZ_HepG2_ENCSR364YEH_profile_pattern_4.n_210-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EDN_ChIP_MAZ_HepG2_ENCSR364YEH_profile_pattern_5.n_141-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EDN_ChIP_MAZ_HepG2_ENCSR364YEH_profile_pattern_6.n_140-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EDN_ChIP_MAZ_HepG2_ENCSR364YEH_profile_pattern_7.n_135-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EDN_ChIP_MAZ_HepG2_ENCSR364YEH_profile_pattern_8.n_107-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EDN_ChIP_MAZ_HepG2_ENCSR364YEH_profile_pattern_9.n_96-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_0.n_12821-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_10.n_147-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_11.n_130-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_12.n_101-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_13.n_78-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_14.n_67-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_15.n_58-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_16.n_40-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_17.n_29-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_18.n_22-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_1.n_4861-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_2.n_4632-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_3.n_1965-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_4.n_518-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_5.n_493-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_6.n_232-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_7.n_184-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_8.n_163-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_9.n_148-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_profile_pattern_0.n_10793-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_profile_pattern_10.n_128-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_profile_pattern_11.n_126-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_profile_pattern_12.n_100-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_profile_pattern_13.n_37-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_profile_pattern_14.n_37-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_profile_pattern_15.n_31-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_profile_pattern_16.n_28-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_profile_pattern_17.n_21-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_profile_pattern_1.n_6768-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_profile_pattern_2.n_4376-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_profile_pattern_3.n_2085-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_profile_pattern_4.n_568-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_profile_pattern_5.n_451-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_profile_pattern_6.n_381-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_profile_pattern_7.n_336-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_profile_pattern_8.n_321-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_profile_pattern_9.n_187-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_profile_pattern_0.n_10653-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_profile_pattern_10.n_75-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_profile_pattern_11.n_68-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_profile_pattern_12.n_36-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_profile_pattern_13.n_36-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_profile_pattern_14.n_34-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_profile_pattern_15.n_24-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_profile_pattern_16.n_20-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_profile_pattern_1.n_8843-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_profile_pattern_2.n_1815-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_profile_pattern_3.n_1297-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_profile_pattern_4.n_1048-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_profile_pattern_5.n_757-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR290SSQ_ChIP_MAZ_HEK293_ENCSR821GPM_profile_pattern_8.n_144-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR290SSQ_ChIP_MAZ_HEK293_ENCSR821GPM_profile_pattern_9.n_110-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR636YLV_ChIP_MAZ_A549_ENCSR118TTR_profile_pattern_0.n_1157-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR636YLV_ChIP_MAZ_A549_ENCSR118TTR_profile_pattern_10.n_37-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR636YLV_ChIP_MAZ_A549_ENCSR118TTR_profile_pattern_11.n_32-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR636YLV_ChIP_MAZ_A549_ENCSR118TTR_profile_pattern_1.n_888-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR636YLV_ChIP_MAZ_A549_ENCSR118TTR_profile_pattern_2.n_497-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR636YLV_ChIP_MAZ_A549_ENCSR118TTR_profile_pattern_4.n_80-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR636YLV_ChIP_MAZ_A549_ENCSR118TTR_profile_pattern_5.n_67-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR636YLV_ChIP_MAZ_A549_ENCSR118TTR_profile_pattern_6.n_57-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR636YLV_ChIP_MAZ_A549_ENCSR118TTR_profile_pattern_7.n_51-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR636YLV_ChIP_MAZ_A549_ENCSR118TTR_profile_pattern_8.n_49-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR636YLV_ChIP_MAZ_A549_ENCSR118TTR_profile_pattern_9.n_43-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_profile_pattern_0.n_4666-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_profile_pattern_10.n_233-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_profile_pattern_11.n_231-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_profile_pattern_12.n_158-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_profile_pattern_13.n_74-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_profile_pattern_14.n_72-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_profile_pattern_15.n_51-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_profile_pattern_16.n_45-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_profile_pattern_17.n_28-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_profile_pattern_18.n_28-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_profile_pattern_19.n_24-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_profile_pattern_1.n_2562-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_profile_pattern_2.n_2175-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-202/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_profile_pattern_3.n_2033-vs-MAZ-202.alignment profile-znf_b1h_alignment/MAZ-202/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/neg_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_profile_pattern_2.n_25-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/neg_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_profile_pattern_3.n_23-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/neg_patterns.ENCSR000EDN_ChIP_MAZ_HepG2_ENCSR364YEH_profile_pattern_0.n_33-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/neg_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_0.n_27-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/neg_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_1.n_24-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/neg_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_2.n_24-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/neg_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_3.n_20-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/neg_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_profile_pattern_1.n_71-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/neg_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_profile_pattern_3.n_42-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/neg_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_profile_pattern_5.n_34-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/neg_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_profile_pattern_6.n_30-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/neg_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_profile_pattern_7.n_27-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/neg_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_profile_pattern_0.n_120-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/neg_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_profile_pattern_1.n_52-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/neg_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_profile_pattern_3.n_24-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/neg_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_profile_pattern_4.n_22-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/neg_patterns.ENCSR290SSQ_ChIP_MAZ_HEK293_ENCSR821GPM_profile_pattern_3.n_42-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/neg_patterns.ENCSR290SSQ_ChIP_MAZ_HEK293_ENCSR821GPM_profile_pattern_4.n_39-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/neg_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_profile_pattern_0.n_490-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/neg_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_profile_pattern_1.n_32-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/neg_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_profile_pattern_2.n_25-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/neg_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_profile_pattern_3.n_21-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/neg_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_profile_pattern_0.n_24-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/neg_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_profile_pattern_1.n_22-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/neg_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_profile_pattern_2.n_21-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/neg_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_profile_pattern_0.n_41-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/neg_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_profile_pattern_1.n_26-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_profile_pattern_0.n_8530-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_profile_pattern_10.n_66-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_profile_pattern_11.n_58-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_profile_pattern_12.n_57-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_profile_pattern_13.n_55-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_profile_pattern_14.n_54-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_profile_pattern_15.n_52-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_profile_pattern_16.n_41-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_profile_pattern_17.n_40-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_profile_pattern_18.n_35-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_profile_pattern_19.n_25-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_profile_pattern_1.n_4074-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_profile_pattern_20.n_21-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_profile_pattern_2.n_2572-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_profile_pattern_3.n_734-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_profile_pattern_4.n_623-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_profile_pattern_5.n_584-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_profile_pattern_6.n_404-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_profile_pattern_7.n_230-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_profile_pattern_8.n_135-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000DZA_ChIP_MAZ_GM12878_ENCSR461ZEC_profile_pattern_9.n_79-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_profile_pattern_0.n_4447-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_profile_pattern_10.n_59-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_profile_pattern_11.n_31-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_profile_pattern_12.n_22-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_profile_pattern_13.n_20-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_profile_pattern_1.n_3123-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_profile_pattern_2.n_1627-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_profile_pattern_3.n_949-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_profile_pattern_4.n_750-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_profile_pattern_5.n_486-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_profile_pattern_6.n_294-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_profile_pattern_7.n_191-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_profile_pattern_8.n_92-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000ECL_ChIP_MAZ_HeLa-S3_ENCSR868PEZ_profile_pattern_9.n_69-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EDN_ChIP_MAZ_HepG2_ENCSR364YEH_profile_pattern_0.n_6981-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EDN_ChIP_MAZ_HepG2_ENCSR364YEH_profile_pattern_1.n_2324-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EDN_ChIP_MAZ_HepG2_ENCSR364YEH_profile_pattern_2.n_368-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EDN_ChIP_MAZ_HepG2_ENCSR364YEH_profile_pattern_3.n_301-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EDN_ChIP_MAZ_HepG2_ENCSR364YEH_profile_pattern_4.n_210-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EDN_ChIP_MAZ_HepG2_ENCSR364YEH_profile_pattern_5.n_141-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EDN_ChIP_MAZ_HepG2_ENCSR364YEH_profile_pattern_6.n_140-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EDN_ChIP_MAZ_HepG2_ENCSR364YEH_profile_pattern_7.n_135-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EDN_ChIP_MAZ_HepG2_ENCSR364YEH_profile_pattern_8.n_107-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EDN_ChIP_MAZ_HepG2_ENCSR364YEH_profile_pattern_9.n_96-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_0.n_12821-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_10.n_147-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_11.n_130-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_12.n_101-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_13.n_78-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_14.n_67-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_15.n_58-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_16.n_40-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_17.n_29-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_18.n_22-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_1.n_4861-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_2.n_4632-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_3.n_1965-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_4.n_518-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_5.n_493-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_6.n_232-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_7.n_184-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_8.n_163-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_9.n_148-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_profile_pattern_0.n_10793-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_profile_pattern_10.n_128-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_profile_pattern_11.n_126-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_profile_pattern_12.n_100-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_profile_pattern_13.n_37-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_profile_pattern_14.n_37-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_profile_pattern_15.n_31-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_profile_pattern_16.n_28-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_profile_pattern_17.n_21-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_profile_pattern_1.n_6768-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_profile_pattern_2.n_4376-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_profile_pattern_3.n_2085-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_profile_pattern_4.n_568-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_profile_pattern_5.n_451-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_profile_pattern_6.n_381-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_profile_pattern_7.n_336-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_profile_pattern_8.n_321-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR000EFX_ChIP_MAZ_K562_ENCSR535NQC_profile_pattern_9.n_187-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_profile_pattern_0.n_10653-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR163IUV_ChIP_MAZ_K562_ENCSR499PPK_profile_pattern_10.n_75-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR288IJC_ChIP_MAZ_MCF-7_ENCSR249QEG_profile_pattern_9.n_137-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR290SSQ_ChIP_MAZ_HEK293_ENCSR821GPM_profile_pattern_0.n_16237-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR290SSQ_ChIP_MAZ_HEK293_ENCSR821GPM_profile_pattern_10.n_97-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR290SSQ_ChIP_MAZ_HEK293_ENCSR821GPM_profile_pattern_11.n_60-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR290SSQ_ChIP_MAZ_HEK293_ENCSR821GPM_profile_pattern_1.n_2767-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR290SSQ_ChIP_MAZ_HEK293_ENCSR821GPM_profile_pattern_2.n_1679-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR290SSQ_ChIP_MAZ_HEK293_ENCSR821GPM_profile_pattern_3.n_1320-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR290SSQ_ChIP_MAZ_HEK293_ENCSR821GPM_profile_pattern_4.n_1059-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR290SSQ_ChIP_MAZ_HEK293_ENCSR821GPM_profile_pattern_5.n_475-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR290SSQ_ChIP_MAZ_HEK293_ENCSR821GPM_profile_pattern_6.n_444-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR290SSQ_ChIP_MAZ_HEK293_ENCSR821GPM_profile_pattern_7.n_151-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR290SSQ_ChIP_MAZ_HEK293_ENCSR821GPM_profile_pattern_8.n_144-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR290SSQ_ChIP_MAZ_HEK293_ENCSR821GPM_profile_pattern_9.n_110-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR636YLV_ChIP_MAZ_A549_ENCSR118TTR_profile_pattern_0.n_1157-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR636YLV_ChIP_MAZ_A549_ENCSR118TTR_profile_pattern_10.n_37-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR636YLV_ChIP_MAZ_A549_ENCSR118TTR_profile_pattern_11.n_32-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR636YLV_ChIP_MAZ_A549_ENCSR118TTR_profile_pattern_2.n_497-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-212/pos_patterns.ENCSR643JRH_ChIP_MAZ_K562_ENCSR098VYP_profile_pattern_10.n_233-vs-MAZ-212.alignment profile-znf_b1h_alignment/MAZ-212/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-216/neg_patterns.ENCSR700PNE_ChIP_MAZ_HepG2_ENCSR898PVS_profile_pattern_2.n_21-vs-MAZ-216.alignment profile-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-216/neg_patterns.ENCSR903MVU_ChIP_MAZ_GM12878_ENCSR335TIH_profile_pattern_0.n_41-vs-MAZ-216.alignment profile-znf_b1h_alignment/MAZ-216/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_17.n_29-vs-MAZ-216.alignment profile-znf_b1h_alignment/MAZ-216/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_1.n_4861-vs-MAZ-216.alignment profile-znf_b1h_alignment/MAZ-216/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_7.n_184-vs-MAZ-216.alignment profile-znf_b1h_alignment/MAZ-216/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MAZ-216/pos_patterns.ENCSR000EFF_ChIP_MAZ_IMR-90_ENCSR982VJO_profile_pattern_8.n_163-vs-MAZ-216.alignment profile-znf_b1h_alignment/MAZ-216/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MTF1-201/pos_patterns.ENCSR849LXI_ChIP_MTF1_K562_ENCSR694JJN_profile_pattern_0.n_796-vs-MTF1-201.alignment profile-znf_b1h_alignment/MTF1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MTF1-201/pos_patterns.ENCSR849LXI_ChIP_MTF1_K562_ENCSR694JJN_profile_pattern_1.n_384-vs-MTF1-201.alignment profile-znf_b1h_alignment/MTF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MTF1-201/pos_patterns.ENCSR849LXI_ChIP_MTF1_K562_ENCSR694JJN_profile_pattern_2.n_128-vs-MTF1-201.alignment profile-znf_b1h_alignment/MTF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MTF1-201/pos_patterns.ENCSR849LXI_ChIP_MTF1_K562_ENCSR694JJN_profile_pattern_3.n_119-vs-MTF1-201.alignment profile-znf_b1h_alignment/MTF1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MTF1-201/pos_patterns.ENCSR849LXI_ChIP_MTF1_K562_ENCSR694JJN_profile_pattern_4.n_118-vs-MTF1-201.alignment profile-znf_b1h_alignment/MTF1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MYNN-204/neg_patterns.ENCSR398TMP_ChIP_MYNN_HepG2_ENCSR693LFO_profile_pattern_2.n_26-vs-MYNN-204.alignment profile-znf_b1h_alignment/MYNN-204/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MYNN-204/neg_patterns.ENCSR737LTZ_ChIP_MYNN_K562_ENCSR073PHB_profile_pattern_3.n_68-vs-MYNN-204.alignment profile-znf_b1h_alignment/MYNN-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MYNN-204/neg_patterns.ENCSR737LTZ_ChIP_MYNN_K562_ENCSR073PHB_profile_pattern_4.n_54-vs-MYNN-204.alignment profile-znf_b1h_alignment/MYNN-204/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/MYNN-204/neg_patterns.ENCSR737LTZ_ChIP_MYNN_K562_ENCSR073PHB_profile_pattern_8.n_39-vs-MYNN-204.alignment profile-znf_b1h_alignment/MYNN-204/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-201/Hughes_GR_models_OSR2_profile-pos.pattern_6.n_208-vs-OSR2-201.alignment profile-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-201/Hughes_GR_models_OSR2_profile-pos.pattern_7.n_200-vs-OSR2-201.alignment profile-znf_b1h_alignment/OSR2-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-201/Hughes_GR_models_OSR2_profile-pos.pattern_9.n_60-vs-OSR2-201.alignment profile-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-201/neg_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_0.n_91-vs-OSR2-201.alignment profile-znf_b1h_alignment/OSR2-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-201/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_11.n_248-vs-OSR2-201.alignment profile-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-201/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_12.n_231-vs-OSR2-201.alignment profile-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-201/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_13.n_209-vs-OSR2-201.alignment profile-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-201/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_14.n_193-vs-OSR2-201.alignment profile-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-201/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_15.n_191-vs-OSR2-201.alignment profile-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-201/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_16.n_174-vs-OSR2-201.alignment profile-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-201/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_17.n_151-vs-OSR2-201.alignment profile-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-201/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_18.n_131-vs-OSR2-201.alignment profile-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-201/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_19.n_71-vs-OSR2-201.alignment profile-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-201/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_1.n_7431-vs-OSR2-201.alignment profile-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-201/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_20.n_57-vs-OSR2-201.alignment profile-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-201/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_21.n_32-vs-OSR2-201.alignment profile-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-201/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_22.n_27-vs-OSR2-201.alignment profile-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-201/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_23.n_24-vs-OSR2-201.alignment profile-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-201/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_2.n_3184-vs-OSR2-201.alignment profile-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-201/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_3.n_2565-vs-OSR2-201.alignment profile-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-201/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_4.n_2537-vs-OSR2-201.alignment profile-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-201/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_5.n_1627-vs-OSR2-201.alignment profile-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-201/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_6.n_1505-vs-OSR2-201.alignment profile-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-201/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_7.n_528-vs-OSR2-201.alignment profile-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-201/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_8.n_470-vs-OSR2-201.alignment profile-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-201/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_9.n_334-vs-OSR2-201.alignment profile-znf_b1h_alignment/OSR2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-202/Hughes_GR_models_OSR2_profile-pos.pattern_0.n_10021-vs-OSR2-202.alignment profile-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-202/Hughes_GR_models_OSR2_profile-pos.pattern_1.n_706-vs-OSR2-202.alignment profile-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-202/Hughes_GR_models_OSR2_profile-pos.pattern_2.n_503-vs-OSR2-202.alignment profile-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-202/Hughes_GR_models_OSR2_profile-pos.pattern_3.n_380-vs-OSR2-202.alignment profile-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-202/Hughes_GR_models_OSR2_profile-pos.pattern_4.n_297-vs-OSR2-202.alignment profile-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-202/Hughes_GR_models_OSR2_profile-pos.pattern_5.n_231-vs-OSR2-202.alignment profile-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-202/Hughes_GR_models_OSR2_profile-pos.pattern_6.n_208-vs-OSR2-202.alignment profile-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-202/Hughes_GR_models_OSR2_profile-pos.pattern_7.n_200-vs-OSR2-202.alignment profile-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-202/Hughes_GR_models_OSR2_profile-pos.pattern_8.n_159-vs-OSR2-202.alignment profile-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-202/Hughes_GR_models_OSR2_profile-pos.pattern_9.n_60-vs-OSR2-202.alignment profile-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-202/neg_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_0.n_91-vs-OSR2-202.alignment profile-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-202/neg_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_1.n_80-vs-OSR2-202.alignment profile-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-202/neg_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_2.n_58-vs-OSR2-202.alignment profile-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-202/neg_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_3.n_40-vs-OSR2-202.alignment profile-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-202/neg_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_4.n_23-vs-OSR2-202.alignment profile-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-202/neg_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_5.n_20-vs-OSR2-202.alignment profile-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-202/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_0.n_10436-vs-OSR2-202.alignment profile-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-202/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_10.n_288-vs-OSR2-202.alignment profile-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-202/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_11.n_248-vs-OSR2-202.alignment profile-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-202/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_12.n_231-vs-OSR2-202.alignment profile-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-202/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_13.n_209-vs-OSR2-202.alignment profile-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-202/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_14.n_193-vs-OSR2-202.alignment profile-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-202/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_15.n_191-vs-OSR2-202.alignment profile-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-202/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_16.n_174-vs-OSR2-202.alignment profile-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-202/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_17.n_151-vs-OSR2-202.alignment profile-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-202/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_18.n_131-vs-OSR2-202.alignment profile-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-202/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_19.n_71-vs-OSR2-202.alignment profile-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-202/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_1.n_7431-vs-OSR2-202.alignment profile-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-202/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_20.n_57-vs-OSR2-202.alignment profile-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-202/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_21.n_32-vs-OSR2-202.alignment profile-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-202/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_22.n_27-vs-OSR2-202.alignment profile-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-202/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_23.n_24-vs-OSR2-202.alignment profile-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-202/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_2.n_3184-vs-OSR2-202.alignment profile-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-202/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_3.n_2565-vs-OSR2-202.alignment profile-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-202/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_4.n_2537-vs-OSR2-202.alignment profile-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-202/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_5.n_1627-vs-OSR2-202.alignment profile-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-202/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_6.n_1505-vs-OSR2-202.alignment profile-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-202/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_7.n_528-vs-OSR2-202.alignment profile-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-202/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_8.n_470-vs-OSR2-202.alignment profile-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-202/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_9.n_334-vs-OSR2-202.alignment profile-znf_b1h_alignment/OSR2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-203/Hughes_GR_models_OSR2_profile-pos.pattern_0.n_10021-vs-OSR2-203.alignment profile-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-203/Hughes_GR_models_OSR2_profile-pos.pattern_1.n_706-vs-OSR2-203.alignment profile-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-203/Hughes_GR_models_OSR2_profile-pos.pattern_2.n_503-vs-OSR2-203.alignment profile-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-203/Hughes_GR_models_OSR2_profile-pos.pattern_3.n_380-vs-OSR2-203.alignment profile-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-203/Hughes_GR_models_OSR2_profile-pos.pattern_4.n_297-vs-OSR2-203.alignment profile-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-203/Hughes_GR_models_OSR2_profile-pos.pattern_5.n_231-vs-OSR2-203.alignment profile-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-203/Hughes_GR_models_OSR2_profile-pos.pattern_6.n_208-vs-OSR2-203.alignment profile-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-203/Hughes_GR_models_OSR2_profile-pos.pattern_7.n_200-vs-OSR2-203.alignment profile-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-203/Hughes_GR_models_OSR2_profile-pos.pattern_8.n_159-vs-OSR2-203.alignment profile-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-203/Hughes_GR_models_OSR2_profile-pos.pattern_9.n_60-vs-OSR2-203.alignment profile-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-203/neg_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_0.n_91-vs-OSR2-203.alignment profile-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-203/neg_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_1.n_80-vs-OSR2-203.alignment profile-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-203/neg_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_2.n_58-vs-OSR2-203.alignment profile-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-203/neg_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_3.n_40-vs-OSR2-203.alignment profile-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-203/neg_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_4.n_23-vs-OSR2-203.alignment profile-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-203/neg_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_5.n_20-vs-OSR2-203.alignment profile-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-203/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_0.n_10436-vs-OSR2-203.alignment profile-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-203/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_10.n_288-vs-OSR2-203.alignment profile-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-203/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_11.n_248-vs-OSR2-203.alignment profile-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-203/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_12.n_231-vs-OSR2-203.alignment profile-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-203/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_13.n_209-vs-OSR2-203.alignment profile-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-203/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_14.n_193-vs-OSR2-203.alignment profile-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-203/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_15.n_191-vs-OSR2-203.alignment profile-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-203/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_16.n_174-vs-OSR2-203.alignment profile-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-203/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_17.n_151-vs-OSR2-203.alignment profile-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-203/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_18.n_131-vs-OSR2-203.alignment profile-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-203/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_19.n_71-vs-OSR2-203.alignment profile-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-203/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_1.n_7431-vs-OSR2-203.alignment profile-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-203/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_20.n_57-vs-OSR2-203.alignment profile-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-203/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_21.n_32-vs-OSR2-203.alignment profile-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-203/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_22.n_27-vs-OSR2-203.alignment profile-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-203/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_23.n_24-vs-OSR2-203.alignment profile-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-203/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_2.n_3184-vs-OSR2-203.alignment profile-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-203/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_3.n_2565-vs-OSR2-203.alignment profile-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-203/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_4.n_2537-vs-OSR2-203.alignment profile-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-203/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_5.n_1627-vs-OSR2-203.alignment profile-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-203/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_6.n_1505-vs-OSR2-203.alignment profile-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-203/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_7.n_528-vs-OSR2-203.alignment profile-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-203/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_8.n_470-vs-OSR2-203.alignment profile-znf_b1h_alignment/OSR2-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/OSR2-203/pos_patterns.ENCSR324LTM_ChIP_OSR2_HEK293_ENCSR685EWN_profile_pattern_9.n_334-vs-OSR2-203.alignment profile-znf_b1h_alignment/OSR2-203/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR969AIM_ChIP_PATZ1_SK-N-SH_ENCSR712MTB_profile_pattern_11.n_111-vs-PATZ1-202.alignment profile-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR969AIM_ChIP_PATZ1_SK-N-SH_ENCSR712MTB_profile_pattern_12.n_106-vs-PATZ1-202.alignment profile-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR969AIM_ChIP_PATZ1_SK-N-SH_ENCSR712MTB_profile_pattern_13.n_82-vs-PATZ1-202.alignment profile-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR969AIM_ChIP_PATZ1_SK-N-SH_ENCSR712MTB_profile_pattern_14.n_71-vs-PATZ1-202.alignment profile-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR969AIM_ChIP_PATZ1_SK-N-SH_ENCSR712MTB_profile_pattern_15.n_65-vs-PATZ1-202.alignment profile-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR969AIM_ChIP_PATZ1_SK-N-SH_ENCSR712MTB_profile_pattern_16.n_41-vs-PATZ1-202.alignment profile-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR969AIM_ChIP_PATZ1_SK-N-SH_ENCSR712MTB_profile_pattern_1.n_3061-vs-PATZ1-202.alignment profile-znf_b1h_alignment/PATZ1-202/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR969AIM_ChIP_PATZ1_SK-N-SH_ENCSR712MTB_profile_pattern_3.n_283-vs-PATZ1-202.alignment profile-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR969AIM_ChIP_PATZ1_SK-N-SH_ENCSR712MTB_profile_pattern_4.n_238-vs-PATZ1-202.alignment profile-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR969AIM_ChIP_PATZ1_SK-N-SH_ENCSR712MTB_profile_pattern_5.n_211-vs-PATZ1-202.alignment profile-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR969AIM_ChIP_PATZ1_SK-N-SH_ENCSR712MTB_profile_pattern_6.n_188-vs-PATZ1-202.alignment profile-znf_b1h_alignment/PATZ1-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/PATZ1-202/pos_patterns.ENCSR969AIM_ChIP_PATZ1_SK-N-SH_ENCSR712MTB_profile_pattern_7.n_182-vs-PATZ1-202.alignment profile-znf_b1h_alignment/PATZ1-202/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/PATZ1-203/neg_patterns.ENCSR549PVK_ChIP_PATZ1_K562_ENCSR204MBZ_profile_pattern_0.n_250-vs-PATZ1-203.alignment profile-znf_b1h_alignment/PATZ1-203/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RBAK-201/pos_patterns.ENCSR441UBA_ChIP_RBAK_HEK293_ENCSR748UHS_profile_pattern_10.n_28-vs-RBAK-201.alignment profile-znf_b1h_alignment/RBAK-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RBAK-201/pos_patterns.ENCSR441UBA_ChIP_RBAK_HEK293_ENCSR748UHS_profile_pattern_11.n_23-vs-RBAK-201.alignment profile-znf_b1h_alignment/RBAK-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RBAK-201/pos_patterns.ENCSR441UBA_ChIP_RBAK_HEK293_ENCSR748UHS_profile_pattern_1.n_513-vs-RBAK-201.alignment profile-znf_b1h_alignment/RBAK-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RBAK-201/pos_patterns.ENCSR441UBA_ChIP_RBAK_HEK293_ENCSR748UHS_profile_pattern_2.n_438-vs-RBAK-201.alignment profile-znf_b1h_alignment/RBAK-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RBAK-201/pos_patterns.ENCSR441UBA_ChIP_RBAK_HEK293_ENCSR748UHS_profile_pattern_3.n_371-vs-RBAK-201.alignment profile-znf_b1h_alignment/RBAK-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RBAK-201/pos_patterns.ENCSR441UBA_ChIP_RBAK_HEK293_ENCSR748UHS_profile_pattern_4.n_185-vs-RBAK-201.alignment profile-znf_b1h_alignment/RBAK-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RBAK-201/pos_patterns.ENCSR441UBA_ChIP_RBAK_HEK293_ENCSR748UHS_profile_pattern_5.n_147-vs-RBAK-201.alignment profile-znf_b1h_alignment/RBAK-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RBAK-201/pos_patterns.ENCSR441UBA_ChIP_RBAK_HEK293_ENCSR748UHS_profile_pattern_6.n_110-vs-RBAK-201.alignment profile-znf_b1h_alignment/RBAK-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RBAK-201/pos_patterns.ENCSR441UBA_ChIP_RBAK_HEK293_ENCSR748UHS_profile_pattern_7.n_105-vs-RBAK-201.alignment profile-znf_b1h_alignment/RBAK-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RBAK-201/pos_patterns.ENCSR441UBA_ChIP_RBAK_HEK293_ENCSR748UHS_profile_pattern_8.n_80-vs-RBAK-201.alignment profile-znf_b1h_alignment/RBAK-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RBAK-201/pos_patterns.ENCSR441UBA_ChIP_RBAK_HEK293_ENCSR748UHS_profile_pattern_9.n_34-vs-RBAK-201.alignment profile-znf_b1h_alignment/RBAK-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_profile_pattern_0.n_439-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_profile_pattern_1.n_275-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_profile_pattern_2.n_275-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_profile_pattern_3.n_100-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_profile_pattern_4.n_73-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_profile_pattern_5.n_56-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_profile_pattern_6.n_30-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_profile_pattern_7.n_23-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BGF_ChIP_REST_GM12878_ENCSR784NGD_profile_pattern_0.n_26-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BGF_ChIP_REST_GM12878_ENCSR784NGD_profile_pattern_1.n_24-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BGF_ChIP_REST_GM12878_ENCSR784NGD_profile_pattern_2.n_22-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BGF_ChIP_REST_GM12878_ENCSR784NGD_profile_pattern_3.n_20-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_profile_pattern_0.n_118-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_profile_pattern_1.n_105-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_profile_pattern_2.n_71-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_profile_pattern_3.n_45-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_profile_pattern_4.n_36-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_profile_pattern_5.n_36-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_profile_pattern_6.n_26-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_profile_pattern_7.n_23-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BJJ_ChIP_REST_SK-N-SH_ENCSR468KZB_profile_pattern_0.n_25-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_profile_pattern_0.n_593-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_profile_pattern_1.n_190-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_profile_pattern_2.n_163-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_profile_pattern_3.n_158-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_profile_pattern_4.n_77-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_profile_pattern_5.n_58-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_profile_pattern_6.n_43-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_profile_pattern_7.n_39-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BOX_ChIP_REST_PFSK-1_ENCSR229LTB_profile_pattern_0.n_395-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BOX_ChIP_REST_PFSK-1_ENCSR229LTB_profile_pattern_1.n_362-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BOX_ChIP_REST_PFSK-1_ENCSR229LTB_profile_pattern_2.n_197-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BOX_ChIP_REST_PFSK-1_ENCSR229LTB_profile_pattern_3.n_40-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BOZ_ChIP_REST_SK-N-SH_ENCSR386QUI_profile_pattern_0.n_75-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BOZ_ChIP_REST_SK-N-SH_ENCSR386QUI_profile_pattern_1.n_70-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BOZ_ChIP_REST_SK-N-SH_ENCSR386QUI_profile_pattern_2.n_31-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BOZ_ChIP_REST_SK-N-SH_ENCSR386QUI_profile_pattern_3.n_27-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BOZ_ChIP_REST_SK-N-SH_ENCSR386QUI_profile_pattern_4.n_26-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BOZ_ChIP_REST_SK-N-SH_ENCSR386QUI_profile_pattern_5.n_21-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BPK_ChIP_REST_Panc1_ENCSR765OBS_profile_pattern_0.n_74-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BPK_ChIP_REST_Panc1_ENCSR765OBS_profile_pattern_1.n_20-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_profile_pattern_0.n_591-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_profile_pattern_1.n_298-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_profile_pattern_2.n_68-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_profile_pattern_3.n_60-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_profile_pattern_4.n_43-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_profile_pattern_0.n_1792-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_profile_pattern_10.n_239-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_profile_pattern_11.n_184-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_profile_pattern_12.n_167-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_profile_pattern_13.n_142-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_profile_pattern_14.n_127-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_profile_pattern_15.n_99-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_profile_pattern_16.n_93-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_profile_pattern_17.n_73-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_profile_pattern_18.n_72-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_profile_pattern_19.n_59-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_profile_pattern_1.n_1570-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_profile_pattern_20.n_55-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_profile_pattern_21.n_22-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_profile_pattern_2.n_782-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_profile_pattern_3.n_742-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_profile_pattern_4.n_574-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_profile_pattern_5.n_561-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_profile_pattern_6.n_457-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_profile_pattern_7.n_303-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_profile_pattern_8.n_287-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_profile_pattern_9.n_241-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BUP_ChIP_REST_Panc1_ENCSR132GIN_profile_pattern_0.n_28-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR000BUP_ChIP_REST_Panc1_ENCSR132GIN_profile_pattern_1.n_23-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR054JMQ_ChIP_REST_K562_ENCSR759WXZ_profile_pattern_0.n_1138-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR054JMQ_ChIP_REST_K562_ENCSR759WXZ_profile_pattern_1.n_613-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR054JMQ_ChIP_REST_K562_ENCSR759WXZ_profile_pattern_2.n_265-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR054JMQ_ChIP_REST_K562_ENCSR759WXZ_profile_pattern_3.n_202-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR054JMQ_ChIP_REST_K562_ENCSR759WXZ_profile_pattern_4.n_200-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR054JMQ_ChIP_REST_K562_ENCSR759WXZ_profile_pattern_5.n_144-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR054JMQ_ChIP_REST_K562_ENCSR759WXZ_profile_pattern_6.n_52-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR054JMQ_ChIP_REST_K562_ENCSR759WXZ_profile_pattern_7.n_36-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_profile_pattern_0.n_293-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_profile_pattern_10.n_22-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_profile_pattern_11.n_21-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_profile_pattern_1.n_146-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_profile_pattern_2.n_89-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_profile_pattern_3.n_82-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_profile_pattern_4.n_81-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_profile_pattern_5.n_56-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_profile_pattern_6.n_53-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_profile_pattern_7.n_51-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_profile_pattern_8.n_24-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_profile_pattern_9.n_23-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR663WAR_ChIP_REST_H1_ENCSR296LFF_profile_pattern_0.n_225-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR663WAR_ChIP_REST_H1_ENCSR296LFF_profile_pattern_1.n_83-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR663WAR_ChIP_REST_H1_ENCSR296LFF_profile_pattern_2.n_73-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR663WAR_ChIP_REST_H1_ENCSR296LFF_profile_pattern_3.n_35-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR663WAR_ChIP_REST_H1_ENCSR296LFF_profile_pattern_4.n_29-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR663WAR_ChIP_REST_H1_ENCSR296LFF_profile_pattern_5.n_23-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_profile_pattern_0.n_111-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_profile_pattern_1.n_61-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_profile_pattern_2.n_55-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_profile_pattern_3.n_48-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_profile_pattern_4.n_37-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR871KYB_ChIP_REST_GM23338_ENCSR543TOL_profile_pattern_0.n_64-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR871KYB_ChIP_REST_GM23338_ENCSR543TOL_profile_pattern_1.n_46-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR871KYB_ChIP_REST_GM23338_ENCSR543TOL_profile_pattern_2.n_39-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR892DRK_ChIP_REST_A549_ENCSR584FHS_profile_pattern_0.n_606-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR892DRK_ChIP_REST_A549_ENCSR584FHS_profile_pattern_1.n_154-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR892DRK_ChIP_REST_A549_ENCSR584FHS_profile_pattern_2.n_147-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR892DRK_ChIP_REST_A549_ENCSR584FHS_profile_pattern_3.n_36-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR892DRK_ChIP_REST_A549_ENCSR584FHS_profile_pattern_4.n_25-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR892DRK_ChIP_REST_A549_ENCSR584FHS_profile_pattern_5.n_23-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR892DRK_ChIP_REST_A549_ENCSR584FHS_profile_pattern_6.n_21-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR893QWP_ChIP_REST_liver_ENCSR314BIS_profile_pattern_0.n_284-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR893QWP_ChIP_REST_liver_ENCSR314BIS_profile_pattern_1.n_201-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR893QWP_ChIP_REST_liver_ENCSR314BIS_profile_pattern_2.n_20-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_profile_pattern_0.n_568-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_profile_pattern_1.n_214-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_profile_pattern_2.n_115-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_profile_pattern_3.n_70-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/neg_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_profile_pattern_4.n_21-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_profile_pattern_0.n_1631-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_profile_pattern_10.n_86-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_profile_pattern_11.n_57-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_profile_pattern_12.n_30-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_profile_pattern_1.n_1527-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_profile_pattern_2.n_1318-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_profile_pattern_3.n_1205-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_profile_pattern_4.n_384-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_profile_pattern_5.n_172-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_profile_pattern_6.n_142-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_profile_pattern_7.n_130-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_profile_pattern_8.n_103-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000ATM_ChIP_REST_K562_ENCSR867KCV_profile_pattern_9.n_87-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BGF_ChIP_REST_GM12878_ENCSR784NGD_profile_pattern_0.n_2877-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BGF_ChIP_REST_GM12878_ENCSR784NGD_profile_pattern_10.n_55-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BGF_ChIP_REST_GM12878_ENCSR784NGD_profile_pattern_11.n_48-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BGF_ChIP_REST_GM12878_ENCSR784NGD_profile_pattern_12.n_38-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BGF_ChIP_REST_GM12878_ENCSR784NGD_profile_pattern_13.n_38-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BGF_ChIP_REST_GM12878_ENCSR784NGD_profile_pattern_14.n_31-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BGF_ChIP_REST_GM12878_ENCSR784NGD_profile_pattern_15.n_29-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BGF_ChIP_REST_GM12878_ENCSR784NGD_profile_pattern_16.n_25-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BGF_ChIP_REST_GM12878_ENCSR784NGD_profile_pattern_17.n_25-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BGF_ChIP_REST_GM12878_ENCSR784NGD_profile_pattern_1.n_1607-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BGF_ChIP_REST_GM12878_ENCSR784NGD_profile_pattern_2.n_1102-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BGF_ChIP_REST_GM12878_ENCSR784NGD_profile_pattern_3.n_545-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BGF_ChIP_REST_GM12878_ENCSR784NGD_profile_pattern_4.n_435-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BGF_ChIP_REST_GM12878_ENCSR784NGD_profile_pattern_5.n_186-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BGF_ChIP_REST_GM12878_ENCSR784NGD_profile_pattern_6.n_100-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BGF_ChIP_REST_GM12878_ENCSR784NGD_profile_pattern_7.n_97-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BGF_ChIP_REST_GM12878_ENCSR784NGD_profile_pattern_8.n_66-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BGF_ChIP_REST_GM12878_ENCSR784NGD_profile_pattern_9.n_58-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_profile_pattern_0.n_8237-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_profile_pattern_10.n_80-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_profile_pattern_11.n_76-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_profile_pattern_12.n_76-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_profile_pattern_13.n_50-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_profile_pattern_14.n_48-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_profile_pattern_15.n_41-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_profile_pattern_16.n_38-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_profile_pattern_17.n_22-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_profile_pattern_18.n_20-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_profile_pattern_1.n_2749-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_profile_pattern_2.n_1834-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_profile_pattern_3.n_1470-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_profile_pattern_4.n_596-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_profile_pattern_5.n_236-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_profile_pattern_6.n_190-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_profile_pattern_7.n_138-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_profile_pattern_8.n_124-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BHM_ChIP_REST_H1_ENCSR235MZF_profile_pattern_9.n_113-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJJ_ChIP_REST_SK-N-SH_ENCSR468KZB_profile_pattern_0.n_3341-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJJ_ChIP_REST_SK-N-SH_ENCSR468KZB_profile_pattern_10.n_22-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJJ_ChIP_REST_SK-N-SH_ENCSR468KZB_profile_pattern_1.n_1682-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJJ_ChIP_REST_SK-N-SH_ENCSR468KZB_profile_pattern_2.n_745-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJJ_ChIP_REST_SK-N-SH_ENCSR468KZB_profile_pattern_3.n_149-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJJ_ChIP_REST_SK-N-SH_ENCSR468KZB_profile_pattern_4.n_125-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJJ_ChIP_REST_SK-N-SH_ENCSR468KZB_profile_pattern_5.n_98-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJJ_ChIP_REST_SK-N-SH_ENCSR468KZB_profile_pattern_6.n_90-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJJ_ChIP_REST_SK-N-SH_ENCSR468KZB_profile_pattern_7.n_51-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJJ_ChIP_REST_SK-N-SH_ENCSR468KZB_profile_pattern_8.n_35-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJJ_ChIP_REST_SK-N-SH_ENCSR468KZB_profile_pattern_9.n_26-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJL_ChIP_REST_HepG2_ENCSR596AXW_profile_pattern_0.n_1771-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJL_ChIP_REST_HepG2_ENCSR596AXW_profile_pattern_1.n_820-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJL_ChIP_REST_HepG2_ENCSR596AXW_profile_pattern_2.n_509-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJL_ChIP_REST_HepG2_ENCSR596AXW_profile_pattern_3.n_460-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJL_ChIP_REST_HepG2_ENCSR596AXW_profile_pattern_4.n_168-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJL_ChIP_REST_HepG2_ENCSR596AXW_profile_pattern_5.n_52-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJL_ChIP_REST_HepG2_ENCSR596AXW_profile_pattern_6.n_33-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJL_ChIP_REST_HepG2_ENCSR596AXW_profile_pattern_7.n_31-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJO_ChIP_REST_Panc1_ENCSR862SMK_profile_pattern_0.n_2234-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJO_ChIP_REST_Panc1_ENCSR862SMK_profile_pattern_10.n_29-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJO_ChIP_REST_Panc1_ENCSR862SMK_profile_pattern_11.n_21-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJO_ChIP_REST_Panc1_ENCSR862SMK_profile_pattern_12.n_21-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJO_ChIP_REST_Panc1_ENCSR862SMK_profile_pattern_1.n_1144-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJO_ChIP_REST_Panc1_ENCSR862SMK_profile_pattern_2.n_528-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJO_ChIP_REST_Panc1_ENCSR862SMK_profile_pattern_3.n_430-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJO_ChIP_REST_Panc1_ENCSR862SMK_profile_pattern_4.n_382-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJO_ChIP_REST_Panc1_ENCSR862SMK_profile_pattern_5.n_155-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJO_ChIP_REST_Panc1_ENCSR862SMK_profile_pattern_6.n_153-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJO_ChIP_REST_Panc1_ENCSR862SMK_profile_pattern_7.n_118-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJO_ChIP_REST_Panc1_ENCSR862SMK_profile_pattern_8.n_88-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJO_ChIP_REST_Panc1_ENCSR862SMK_profile_pattern_9.n_82-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJP_ChIP_REST_PFSK-1_ENCSR811WIG_profile_pattern_0.n_2300-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJP_ChIP_REST_PFSK-1_ENCSR811WIG_profile_pattern_10.n_35-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJP_ChIP_REST_PFSK-1_ENCSR811WIG_profile_pattern_11.n_31-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJP_ChIP_REST_PFSK-1_ENCSR811WIG_profile_pattern_12.n_27-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJP_ChIP_REST_PFSK-1_ENCSR811WIG_profile_pattern_1.n_1630-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJP_ChIP_REST_PFSK-1_ENCSR811WIG_profile_pattern_2.n_1619-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJP_ChIP_REST_PFSK-1_ENCSR811WIG_profile_pattern_3.n_352-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJP_ChIP_REST_PFSK-1_ENCSR811WIG_profile_pattern_4.n_309-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJP_ChIP_REST_PFSK-1_ENCSR811WIG_profile_pattern_5.n_297-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJP_ChIP_REST_PFSK-1_ENCSR811WIG_profile_pattern_6.n_175-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJP_ChIP_REST_PFSK-1_ENCSR811WIG_profile_pattern_7.n_68-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJP_ChIP_REST_PFSK-1_ENCSR811WIG_profile_pattern_8.n_50-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BJP_ChIP_REST_PFSK-1_ENCSR811WIG_profile_pattern_9.n_42-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMN_ChIP_REST_HeLa-S3_ENCSR673YCJ_profile_pattern_0.n_4152-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMN_ChIP_REST_HeLa-S3_ENCSR673YCJ_profile_pattern_10.n_87-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMN_ChIP_REST_HeLa-S3_ENCSR673YCJ_profile_pattern_11.n_72-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMN_ChIP_REST_HeLa-S3_ENCSR673YCJ_profile_pattern_12.n_57-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMN_ChIP_REST_HeLa-S3_ENCSR673YCJ_profile_pattern_13.n_40-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMN_ChIP_REST_HeLa-S3_ENCSR673YCJ_profile_pattern_14.n_33-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMN_ChIP_REST_HeLa-S3_ENCSR673YCJ_profile_pattern_15.n_30-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMN_ChIP_REST_HeLa-S3_ENCSR673YCJ_profile_pattern_1.n_3186-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMN_ChIP_REST_HeLa-S3_ENCSR673YCJ_profile_pattern_2.n_2234-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMN_ChIP_REST_HeLa-S3_ENCSR673YCJ_profile_pattern_3.n_1087-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMN_ChIP_REST_HeLa-S3_ENCSR673YCJ_profile_pattern_4.n_544-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMN_ChIP_REST_HeLa-S3_ENCSR673YCJ_profile_pattern_5.n_539-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMN_ChIP_REST_HeLa-S3_ENCSR673YCJ_profile_pattern_6.n_466-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMN_ChIP_REST_HeLa-S3_ENCSR673YCJ_profile_pattern_7.n_279-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMN_ChIP_REST_HeLa-S3_ENCSR673YCJ_profile_pattern_8.n_261-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMN_ChIP_REST_HeLa-S3_ENCSR673YCJ_profile_pattern_9.n_242-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_profile_pattern_0.n_6085-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_profile_pattern_10.n_230-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_profile_pattern_11.n_223-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_profile_pattern_12.n_213-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_profile_pattern_13.n_155-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_profile_pattern_14.n_133-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_profile_pattern_15.n_98-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_profile_pattern_16.n_94-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_profile_pattern_17.n_88-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_profile_pattern_18.n_77-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_profile_pattern_19.n_74-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_profile_pattern_1.n_4636-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_profile_pattern_20.n_71-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_profile_pattern_21.n_64-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_profile_pattern_22.n_62-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_profile_pattern_23.n_48-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_profile_pattern_24.n_41-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_profile_pattern_25.n_33-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_profile_pattern_26.n_31-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_profile_pattern_27.n_30-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_profile_pattern_28.n_30-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_profile_pattern_29.n_23-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_profile_pattern_2.n_4131-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_profile_pattern_3.n_3029-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_profile_pattern_4.n_2427-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_profile_pattern_5.n_904-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_profile_pattern_6.n_532-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_profile_pattern_7.n_377-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_profile_pattern_8.n_343-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BMW_ChIP_REST_K562_ENCSR364RHG_profile_pattern_9.n_279-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_profile_pattern_0.n_2692-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_profile_pattern_10.n_151-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_profile_pattern_11.n_148-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_profile_pattern_12.n_134-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_profile_pattern_13.n_126-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_profile_pattern_14.n_95-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_profile_pattern_15.n_91-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_profile_pattern_16.n_87-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_profile_pattern_17.n_84-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_profile_pattern_18.n_77-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_profile_pattern_19.n_77-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_profile_pattern_1.n_2305-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_profile_pattern_20.n_70-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_profile_pattern_21.n_26-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_profile_pattern_22.n_24-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_profile_pattern_23.n_23-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_profile_pattern_24.n_20-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_profile_pattern_2.n_1820-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_profile_pattern_3.n_1294-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_profile_pattern_4.n_949-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_profile_pattern_5.n_779-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_profile_pattern_6.n_373-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_profile_pattern_7.n_246-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_profile_pattern_8.n_201-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOT_ChIP_REST_HepG2_ENCSR629ECU_profile_pattern_9.n_153-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOX_ChIP_REST_PFSK-1_ENCSR229LTB_profile_pattern_0.n_6631-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOX_ChIP_REST_PFSK-1_ENCSR229LTB_profile_pattern_10.n_38-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOX_ChIP_REST_PFSK-1_ENCSR229LTB_profile_pattern_11.n_32-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOX_ChIP_REST_PFSK-1_ENCSR229LTB_profile_pattern_12.n_31-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOX_ChIP_REST_PFSK-1_ENCSR229LTB_profile_pattern_13.n_31-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOX_ChIP_REST_PFSK-1_ENCSR229LTB_profile_pattern_14.n_27-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOX_ChIP_REST_PFSK-1_ENCSR229LTB_profile_pattern_1.n_3926-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOX_ChIP_REST_PFSK-1_ENCSR229LTB_profile_pattern_2.n_3830-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOX_ChIP_REST_PFSK-1_ENCSR229LTB_profile_pattern_3.n_608-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOX_ChIP_REST_PFSK-1_ENCSR229LTB_profile_pattern_4.n_139-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOX_ChIP_REST_PFSK-1_ENCSR229LTB_profile_pattern_5.n_133-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOX_ChIP_REST_PFSK-1_ENCSR229LTB_profile_pattern_6.n_125-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOX_ChIP_REST_PFSK-1_ENCSR229LTB_profile_pattern_7.n_72-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOX_ChIP_REST_PFSK-1_ENCSR229LTB_profile_pattern_8.n_58-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOX_ChIP_REST_PFSK-1_ENCSR229LTB_profile_pattern_9.n_39-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOZ_ChIP_REST_SK-N-SH_ENCSR386QUI_profile_pattern_0.n_5880-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOZ_ChIP_REST_SK-N-SH_ENCSR386QUI_profile_pattern_10.n_129-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOZ_ChIP_REST_SK-N-SH_ENCSR386QUI_profile_pattern_11.n_106-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOZ_ChIP_REST_SK-N-SH_ENCSR386QUI_profile_pattern_12.n_69-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOZ_ChIP_REST_SK-N-SH_ENCSR386QUI_profile_pattern_13.n_51-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOZ_ChIP_REST_SK-N-SH_ENCSR386QUI_profile_pattern_14.n_45-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOZ_ChIP_REST_SK-N-SH_ENCSR386QUI_profile_pattern_15.n_45-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOZ_ChIP_REST_SK-N-SH_ENCSR386QUI_profile_pattern_16.n_33-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOZ_ChIP_REST_SK-N-SH_ENCSR386QUI_profile_pattern_17.n_31-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOZ_ChIP_REST_SK-N-SH_ENCSR386QUI_profile_pattern_18.n_30-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOZ_ChIP_REST_SK-N-SH_ENCSR386QUI_profile_pattern_19.n_28-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOZ_ChIP_REST_SK-N-SH_ENCSR386QUI_profile_pattern_1.n_3522-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOZ_ChIP_REST_SK-N-SH_ENCSR386QUI_profile_pattern_2.n_3200-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOZ_ChIP_REST_SK-N-SH_ENCSR386QUI_profile_pattern_3.n_3042-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOZ_ChIP_REST_SK-N-SH_ENCSR386QUI_profile_pattern_4.n_503-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOZ_ChIP_REST_SK-N-SH_ENCSR386QUI_profile_pattern_5.n_168-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOZ_ChIP_REST_SK-N-SH_ENCSR386QUI_profile_pattern_6.n_160-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOZ_ChIP_REST_SK-N-SH_ENCSR386QUI_profile_pattern_7.n_154-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOZ_ChIP_REST_SK-N-SH_ENCSR386QUI_profile_pattern_8.n_150-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BOZ_ChIP_REST_SK-N-SH_ENCSR386QUI_profile_pattern_9.n_146-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BPK_ChIP_REST_Panc1_ENCSR765OBS_profile_pattern_0.n_1759-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BPK_ChIP_REST_Panc1_ENCSR765OBS_profile_pattern_10.n_22-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BPK_ChIP_REST_Panc1_ENCSR765OBS_profile_pattern_1.n_1119-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BPK_ChIP_REST_Panc1_ENCSR765OBS_profile_pattern_2.n_1023-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BPK_ChIP_REST_Panc1_ENCSR765OBS_profile_pattern_3.n_139-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BPK_ChIP_REST_Panc1_ENCSR765OBS_profile_pattern_4.n_127-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BPK_ChIP_REST_Panc1_ENCSR765OBS_profile_pattern_5.n_77-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BPK_ChIP_REST_Panc1_ENCSR765OBS_profile_pattern_6.n_37-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BPK_ChIP_REST_Panc1_ENCSR765OBS_profile_pattern_7.n_35-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BPK_ChIP_REST_Panc1_ENCSR765OBS_profile_pattern_8.n_27-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BPK_ChIP_REST_Panc1_ENCSR765OBS_profile_pattern_9.n_24-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_profile_pattern_0.n_3065-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_profile_pattern_10.n_260-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_profile_pattern_11.n_243-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_profile_pattern_12.n_220-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_profile_pattern_13.n_208-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_profile_pattern_14.n_157-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_profile_pattern_15.n_107-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_profile_pattern_16.n_94-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_profile_pattern_17.n_89-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_profile_pattern_18.n_82-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_profile_pattern_19.n_82-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_profile_pattern_1.n_2497-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_profile_pattern_20.n_82-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_profile_pattern_21.n_79-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_profile_pattern_22.n_78-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_profile_pattern_23.n_74-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_profile_pattern_24.n_74-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_profile_pattern_25.n_71-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_profile_pattern_26.n_60-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_profile_pattern_27.n_54-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_profile_pattern_28.n_43-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_profile_pattern_29.n_39-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_profile_pattern_2.n_1336-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_profile_pattern_30.n_25-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_profile_pattern_31.n_22-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_profile_pattern_32.n_21-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_profile_pattern_3.n_1331-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_profile_pattern_4.n_722-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_profile_pattern_5.n_595-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_profile_pattern_6.n_392-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_profile_pattern_7.n_389-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_profile_pattern_8.n_356-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQP_ChIP_REST_A549_ENCSR108OCH_profile_pattern_9.n_325-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_profile_pattern_0.n_2702-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_profile_pattern_10.n_54-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_profile_pattern_11.n_41-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_profile_pattern_12.n_38-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_profile_pattern_13.n_29-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_profile_pattern_14.n_28-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_profile_pattern_15.n_27-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_profile_pattern_1.n_1084-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_profile_pattern_2.n_935-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_profile_pattern_3.n_331-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_profile_pattern_4.n_165-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_profile_pattern_5.n_143-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_profile_pattern_6.n_100-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_profile_pattern_7.n_76-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_profile_pattern_8.n_75-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BQS_ChIP_REST_GM12878_ENCSR805DLB_profile_pattern_9.n_62-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BSP_ChIP_REST_MCF-7_ENCSR640PXF_profile_pattern_0.n_3706-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BSP_ChIP_REST_MCF-7_ENCSR640PXF_profile_pattern_10.n_106-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BSP_ChIP_REST_MCF-7_ENCSR640PXF_profile_pattern_11.n_106-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BSP_ChIP_REST_MCF-7_ENCSR640PXF_profile_pattern_12.n_97-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BSP_ChIP_REST_MCF-7_ENCSR640PXF_profile_pattern_13.n_91-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BSP_ChIP_REST_MCF-7_ENCSR640PXF_profile_pattern_14.n_82-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BSP_ChIP_REST_MCF-7_ENCSR640PXF_profile_pattern_15.n_49-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BSP_ChIP_REST_MCF-7_ENCSR640PXF_profile_pattern_16.n_46-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BSP_ChIP_REST_MCF-7_ENCSR640PXF_profile_pattern_17.n_37-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BSP_ChIP_REST_MCF-7_ENCSR640PXF_profile_pattern_18.n_31-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BSP_ChIP_REST_MCF-7_ENCSR640PXF_profile_pattern_19.n_23-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BSP_ChIP_REST_MCF-7_ENCSR640PXF_profile_pattern_1.n_2427-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BSP_ChIP_REST_MCF-7_ENCSR640PXF_profile_pattern_2.n_2183-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BSP_ChIP_REST_MCF-7_ENCSR640PXF_profile_pattern_3.n_1598-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BSP_ChIP_REST_MCF-7_ENCSR640PXF_profile_pattern_4.n_436-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BSP_ChIP_REST_MCF-7_ENCSR640PXF_profile_pattern_5.n_399-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BSP_ChIP_REST_MCF-7_ENCSR640PXF_profile_pattern_6.n_223-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BSP_ChIP_REST_MCF-7_ENCSR640PXF_profile_pattern_7.n_219-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BSP_ChIP_REST_MCF-7_ENCSR640PXF_profile_pattern_8.n_148-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BSP_ChIP_REST_MCF-7_ENCSR640PXF_profile_pattern_9.n_135-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTF_ChIP_REST_HL-60_ENCSR900KSB_profile_pattern_0.n_3813-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTF_ChIP_REST_HL-60_ENCSR900KSB_profile_pattern_10.n_125-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTF_ChIP_REST_HL-60_ENCSR900KSB_profile_pattern_11.n_120-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTF_ChIP_REST_HL-60_ENCSR900KSB_profile_pattern_12.n_103-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTF_ChIP_REST_HL-60_ENCSR900KSB_profile_pattern_13.n_90-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTF_ChIP_REST_HL-60_ENCSR900KSB_profile_pattern_14.n_73-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTF_ChIP_REST_HL-60_ENCSR900KSB_profile_pattern_15.n_46-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTF_ChIP_REST_HL-60_ENCSR900KSB_profile_pattern_16.n_21-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTF_ChIP_REST_HL-60_ENCSR900KSB_profile_pattern_1.n_2580-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTF_ChIP_REST_HL-60_ENCSR900KSB_profile_pattern_2.n_962-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTF_ChIP_REST_HL-60_ENCSR900KSB_profile_pattern_3.n_722-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTF_ChIP_REST_HL-60_ENCSR900KSB_profile_pattern_4.n_573-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTF_ChIP_REST_HL-60_ENCSR900KSB_profile_pattern_5.n_418-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTF_ChIP_REST_HL-60_ENCSR900KSB_profile_pattern_6.n_411-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTF_ChIP_REST_HL-60_ENCSR900KSB_profile_pattern_7.n_309-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTF_ChIP_REST_HL-60_ENCSR900KSB_profile_pattern_8.n_257-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTF_ChIP_REST_HL-60_ENCSR900KSB_profile_pattern_9.n_233-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_profile_pattern_0.n_12279-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_profile_pattern_10.n_230-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_profile_pattern_11.n_174-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_profile_pattern_12.n_143-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_profile_pattern_13.n_91-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_profile_pattern_14.n_81-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_profile_pattern_15.n_79-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_profile_pattern_16.n_65-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_profile_pattern_17.n_63-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_profile_pattern_18.n_61-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_profile_pattern_19.n_51-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_profile_pattern_1.n_9705-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_profile_pattern_20.n_21-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_profile_pattern_2.n_4287-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_profile_pattern_3.n_972-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_profile_pattern_4.n_883-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_profile_pattern_5.n_651-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_profile_pattern_6.n_637-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_profile_pattern_7.n_285-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_profile_pattern_8.n_282-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BTV_ChIP_REST_neural-cell_ENCSR282ZFA_profile_pattern_9.n_259-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUP_ChIP_REST_Panc1_ENCSR132GIN_profile_pattern_0.n_3018-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUP_ChIP_REST_Panc1_ENCSR132GIN_profile_pattern_10.n_44-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUP_ChIP_REST_Panc1_ENCSR132GIN_profile_pattern_11.n_34-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUP_ChIP_REST_Panc1_ENCSR132GIN_profile_pattern_12.n_31-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUP_ChIP_REST_Panc1_ENCSR132GIN_profile_pattern_13.n_23-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUP_ChIP_REST_Panc1_ENCSR132GIN_profile_pattern_14.n_23-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUP_ChIP_REST_Panc1_ENCSR132GIN_profile_pattern_15.n_21-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUP_ChIP_REST_Panc1_ENCSR132GIN_profile_pattern_1.n_1393-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUP_ChIP_REST_Panc1_ENCSR132GIN_profile_pattern_2.n_516-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUP_ChIP_REST_Panc1_ENCSR132GIN_profile_pattern_3.n_308-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUP_ChIP_REST_Panc1_ENCSR132GIN_profile_pattern_4.n_163-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUP_ChIP_REST_Panc1_ENCSR132GIN_profile_pattern_5.n_150-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUP_ChIP_REST_Panc1_ENCSR132GIN_profile_pattern_6.n_125-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUP_ChIP_REST_Panc1_ENCSR132GIN_profile_pattern_7.n_122-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUP_ChIP_REST_Panc1_ENCSR132GIN_profile_pattern_8.n_79-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUP_ChIP_REST_Panc1_ENCSR132GIN_profile_pattern_9.n_74-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUU_ChIP_REST_Ishikawa_ENCSR174BCS_profile_pattern_0.n_5066-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUU_ChIP_REST_Ishikawa_ENCSR174BCS_profile_pattern_10.n_62-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUU_ChIP_REST_Ishikawa_ENCSR174BCS_profile_pattern_11.n_60-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUU_ChIP_REST_Ishikawa_ENCSR174BCS_profile_pattern_12.n_49-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUU_ChIP_REST_Ishikawa_ENCSR174BCS_profile_pattern_13.n_40-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUU_ChIP_REST_Ishikawa_ENCSR174BCS_profile_pattern_14.n_40-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUU_ChIP_REST_Ishikawa_ENCSR174BCS_profile_pattern_15.n_24-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUU_ChIP_REST_Ishikawa_ENCSR174BCS_profile_pattern_16.n_21-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUU_ChIP_REST_Ishikawa_ENCSR174BCS_profile_pattern_1.n_3818-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUU_ChIP_REST_Ishikawa_ENCSR174BCS_profile_pattern_2.n_459-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUU_ChIP_REST_Ishikawa_ENCSR174BCS_profile_pattern_3.n_427-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUU_ChIP_REST_Ishikawa_ENCSR174BCS_profile_pattern_4.n_243-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUU_ChIP_REST_Ishikawa_ENCSR174BCS_profile_pattern_5.n_216-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUU_ChIP_REST_Ishikawa_ENCSR174BCS_profile_pattern_6.n_140-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUU_ChIP_REST_Ishikawa_ENCSR174BCS_profile_pattern_7.n_115-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUU_ChIP_REST_Ishikawa_ENCSR174BCS_profile_pattern_8.n_104-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BUU_ChIP_REST_Ishikawa_ENCSR174BCS_profile_pattern_9.n_91-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BVI_ChIP_REST_HCT116_ENCSR148KXV_profile_pattern_0.n_2027-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BVI_ChIP_REST_HCT116_ENCSR148KXV_profile_pattern_1.n_1184-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BVI_ChIP_REST_HCT116_ENCSR148KXV_profile_pattern_2.n_286-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BVI_ChIP_REST_HCT116_ENCSR148KXV_profile_pattern_3.n_219-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BVI_ChIP_REST_HCT116_ENCSR148KXV_profile_pattern_4.n_211-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR000BVI_ChIP_REST_HCT116_ENCSR148KXV_profile_pattern_5.n_110-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR054JMQ_ChIP_REST_K562_ENCSR759WXZ_profile_pattern_0.n_1335-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR054JMQ_ChIP_REST_K562_ENCSR759WXZ_profile_pattern_10.n_40-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR054JMQ_ChIP_REST_K562_ENCSR759WXZ_profile_pattern_11.n_38-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR054JMQ_ChIP_REST_K562_ENCSR759WXZ_profile_pattern_12.n_23-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR054JMQ_ChIP_REST_K562_ENCSR759WXZ_profile_pattern_1.n_526-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR054JMQ_ChIP_REST_K562_ENCSR759WXZ_profile_pattern_2.n_233-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR054JMQ_ChIP_REST_K562_ENCSR759WXZ_profile_pattern_3.n_229-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR054JMQ_ChIP_REST_K562_ENCSR759WXZ_profile_pattern_4.n_227-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR054JMQ_ChIP_REST_K562_ENCSR759WXZ_profile_pattern_5.n_182-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR054JMQ_ChIP_REST_K562_ENCSR759WXZ_profile_pattern_6.n_171-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR054JMQ_ChIP_REST_K562_ENCSR759WXZ_profile_pattern_7.n_159-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR054JMQ_ChIP_REST_K562_ENCSR759WXZ_profile_pattern_8.n_108-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR054JMQ_ChIP_REST_K562_ENCSR759WXZ_profile_pattern_9.n_46-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_profile_pattern_0.n_14020-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_profile_pattern_10.n_268-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_profile_pattern_11.n_223-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_profile_pattern_12.n_210-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_profile_pattern_13.n_111-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_profile_pattern_14.n_110-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_profile_pattern_15.n_94-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_profile_pattern_16.n_91-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_profile_pattern_17.n_64-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_profile_pattern_18.n_27-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_profile_pattern_1.n_2955-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_profile_pattern_2.n_1672-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_profile_pattern_3.n_923-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_profile_pattern_4.n_883-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_profile_pattern_5.n_614-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_profile_pattern_6.n_515-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_profile_pattern_7.n_489-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_profile_pattern_8.n_432-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR137ZMQ_ChIP_REST_K562_ENCSR831SVZ_profile_pattern_9.n_274-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR663WAR_ChIP_REST_H1_ENCSR296LFF_profile_pattern_0.n_2208-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR663WAR_ChIP_REST_H1_ENCSR296LFF_profile_pattern_10.n_60-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR663WAR_ChIP_REST_H1_ENCSR296LFF_profile_pattern_11.n_46-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR663WAR_ChIP_REST_H1_ENCSR296LFF_profile_pattern_12.n_45-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR663WAR_ChIP_REST_H1_ENCSR296LFF_profile_pattern_13.n_41-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR663WAR_ChIP_REST_H1_ENCSR296LFF_profile_pattern_14.n_20-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR663WAR_ChIP_REST_H1_ENCSR296LFF_profile_pattern_1.n_1164-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR663WAR_ChIP_REST_H1_ENCSR296LFF_profile_pattern_2.n_1009-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR663WAR_ChIP_REST_H1_ENCSR296LFF_profile_pattern_3.n_511-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR663WAR_ChIP_REST_H1_ENCSR296LFF_profile_pattern_4.n_422-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR663WAR_ChIP_REST_H1_ENCSR296LFF_profile_pattern_5.n_204-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR663WAR_ChIP_REST_H1_ENCSR296LFF_profile_pattern_6.n_120-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR663WAR_ChIP_REST_H1_ENCSR296LFF_profile_pattern_7.n_104-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR663WAR_ChIP_REST_H1_ENCSR296LFF_profile_pattern_8.n_84-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR663WAR_ChIP_REST_H1_ENCSR296LFF_profile_pattern_9.n_62-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_profile_pattern_0.n_5834-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_profile_pattern_10.n_372-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_profile_pattern_11.n_272-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_profile_pattern_12.n_265-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_profile_pattern_13.n_261-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_profile_pattern_14.n_255-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_profile_pattern_15.n_250-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_profile_pattern_16.n_224-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_profile_pattern_17.n_160-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_profile_pattern_18.n_137-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_profile_pattern_19.n_124-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_profile_pattern_1.n_2744-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_profile_pattern_20.n_104-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_profile_pattern_21.n_64-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_profile_pattern_22.n_31-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_profile_pattern_23.n_30-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_profile_pattern_24.n_27-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_profile_pattern_25.n_26-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_profile_pattern_26.n_22-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_profile_pattern_2.n_2063-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_profile_pattern_3.n_1583-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_profile_pattern_4.n_1433-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_profile_pattern_5.n_1330-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_profile_pattern_6.n_816-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_profile_pattern_7.n_753-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_profile_pattern_8.n_662-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR867WPH_ChIP_REST_liver_ENCSR596SVU_profile_pattern_9.n_595-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR871KYB_ChIP_REST_GM23338_ENCSR543TOL_profile_pattern_0.n_3018-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR871KYB_ChIP_REST_GM23338_ENCSR543TOL_profile_pattern_10.n_43-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR871KYB_ChIP_REST_GM23338_ENCSR543TOL_profile_pattern_11.n_29-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR871KYB_ChIP_REST_GM23338_ENCSR543TOL_profile_pattern_12.n_28-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR871KYB_ChIP_REST_GM23338_ENCSR543TOL_profile_pattern_13.n_24-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR871KYB_ChIP_REST_GM23338_ENCSR543TOL_profile_pattern_14.n_21-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR871KYB_ChIP_REST_GM23338_ENCSR543TOL_profile_pattern_15.n_20-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR871KYB_ChIP_REST_GM23338_ENCSR543TOL_profile_pattern_1.n_1324-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR871KYB_ChIP_REST_GM23338_ENCSR543TOL_profile_pattern_2.n_384-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR871KYB_ChIP_REST_GM23338_ENCSR543TOL_profile_pattern_3.n_175-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR871KYB_ChIP_REST_GM23338_ENCSR543TOL_profile_pattern_4.n_89-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR871KYB_ChIP_REST_GM23338_ENCSR543TOL_profile_pattern_5.n_89-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR871KYB_ChIP_REST_GM23338_ENCSR543TOL_profile_pattern_6.n_59-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR871KYB_ChIP_REST_GM23338_ENCSR543TOL_profile_pattern_7.n_59-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR871KYB_ChIP_REST_GM23338_ENCSR543TOL_profile_pattern_8.n_46-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR871KYB_ChIP_REST_GM23338_ENCSR543TOL_profile_pattern_9.n_44-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR892DRK_ChIP_REST_A549_ENCSR584FHS_profile_pattern_0.n_2480-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR892DRK_ChIP_REST_A549_ENCSR584FHS_profile_pattern_10.n_103-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR892DRK_ChIP_REST_A549_ENCSR584FHS_profile_pattern_11.n_82-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR892DRK_ChIP_REST_A549_ENCSR584FHS_profile_pattern_12.n_76-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR892DRK_ChIP_REST_A549_ENCSR584FHS_profile_pattern_13.n_44-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR892DRK_ChIP_REST_A549_ENCSR584FHS_profile_pattern_14.n_25-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR892DRK_ChIP_REST_A549_ENCSR584FHS_profile_pattern_1.n_1727-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR892DRK_ChIP_REST_A549_ENCSR584FHS_profile_pattern_2.n_1077-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR892DRK_ChIP_REST_A549_ENCSR584FHS_profile_pattern_3.n_839-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR892DRK_ChIP_REST_A549_ENCSR584FHS_profile_pattern_4.n_615-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR892DRK_ChIP_REST_A549_ENCSR584FHS_profile_pattern_5.n_192-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR892DRK_ChIP_REST_A549_ENCSR584FHS_profile_pattern_6.n_174-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR892DRK_ChIP_REST_A549_ENCSR584FHS_profile_pattern_7.n_170-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR892DRK_ChIP_REST_A549_ENCSR584FHS_profile_pattern_8.n_165-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR892DRK_ChIP_REST_A549_ENCSR584FHS_profile_pattern_9.n_108-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR893QWP_ChIP_REST_liver_ENCSR314BIS_profile_pattern_0.n_2186-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR893QWP_ChIP_REST_liver_ENCSR314BIS_profile_pattern_10.n_41-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR893QWP_ChIP_REST_liver_ENCSR314BIS_profile_pattern_11.n_34-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR893QWP_ChIP_REST_liver_ENCSR314BIS_profile_pattern_12.n_24-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR893QWP_ChIP_REST_liver_ENCSR314BIS_profile_pattern_1.n_1675-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR893QWP_ChIP_REST_liver_ENCSR314BIS_profile_pattern_2.n_1183-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR893QWP_ChIP_REST_liver_ENCSR314BIS_profile_pattern_3.n_1031-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR893QWP_ChIP_REST_liver_ENCSR314BIS_profile_pattern_4.n_358-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR893QWP_ChIP_REST_liver_ENCSR314BIS_profile_pattern_5.n_261-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR893QWP_ChIP_REST_liver_ENCSR314BIS_profile_pattern_6.n_217-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR893QWP_ChIP_REST_liver_ENCSR314BIS_profile_pattern_7.n_108-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR893QWP_ChIP_REST_liver_ENCSR314BIS_profile_pattern_8.n_83-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR893QWP_ChIP_REST_liver_ENCSR314BIS_profile_pattern_9.n_52-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_profile_pattern_0.n_5929-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_profile_pattern_10.n_119-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_profile_pattern_11.n_79-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_profile_pattern_12.n_49-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_profile_pattern_13.n_44-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_profile_pattern_14.n_38-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_profile_pattern_15.n_33-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_profile_pattern_16.n_32-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_profile_pattern_17.n_29-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_profile_pattern_18.n_25-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_profile_pattern_1.n_4573-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_profile_pattern_2.n_4042-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_profile_pattern_3.n_792-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_profile_pattern_4.n_495-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_profile_pattern_5.n_354-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_profile_pattern_6.n_346-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_profile_pattern_7.n_283-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_profile_pattern_8.n_191-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/REST-201/pos_patterns.ENCSR896UBV_ChIP_REST_HEK293_ENCSR067SUX_profile_pattern_9.n_152-vs-REST-201.alignment profile-znf_b1h_alignment/REST-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RLF-201/neg_patterns.ENCSR718SDE_ChIP_RLF_K562_ENCSR602TYB_profile_pattern_0.n_22-vs-RLF-201.alignment profile-znf_b1h_alignment/RLF-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RLF-201/neg_patterns.ENCSR718SDE_ChIP_RLF_K562_ENCSR602TYB_profile_pattern_1.n_20-vs-RLF-201.alignment profile-znf_b1h_alignment/RLF-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RLF-201/pos_patterns.ENCSR718SDE_ChIP_RLF_K562_ENCSR602TYB_profile_pattern_0.n_2232-vs-RLF-201.alignment profile-znf_b1h_alignment/RLF-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RLF-201/pos_patterns.ENCSR718SDE_ChIP_RLF_K562_ENCSR602TYB_profile_pattern_10.n_68-vs-RLF-201.alignment profile-znf_b1h_alignment/RLF-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RLF-201/pos_patterns.ENCSR718SDE_ChIP_RLF_K562_ENCSR602TYB_profile_pattern_11.n_57-vs-RLF-201.alignment profile-znf_b1h_alignment/RLF-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RLF-201/pos_patterns.ENCSR718SDE_ChIP_RLF_K562_ENCSR602TYB_profile_pattern_12.n_48-vs-RLF-201.alignment profile-znf_b1h_alignment/RLF-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RLF-201/pos_patterns.ENCSR718SDE_ChIP_RLF_K562_ENCSR602TYB_profile_pattern_13.n_25-vs-RLF-201.alignment profile-znf_b1h_alignment/RLF-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RLF-201/pos_patterns.ENCSR718SDE_ChIP_RLF_K562_ENCSR602TYB_profile_pattern_14.n_24-vs-RLF-201.alignment profile-znf_b1h_alignment/RLF-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RLF-201/pos_patterns.ENCSR718SDE_ChIP_RLF_K562_ENCSR602TYB_profile_pattern_1.n_279-vs-RLF-201.alignment profile-znf_b1h_alignment/RLF-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RLF-201/pos_patterns.ENCSR718SDE_ChIP_RLF_K562_ENCSR602TYB_profile_pattern_2.n_277-vs-RLF-201.alignment profile-znf_b1h_alignment/RLF-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RLF-201/pos_patterns.ENCSR718SDE_ChIP_RLF_K562_ENCSR602TYB_profile_pattern_3.n_270-vs-RLF-201.alignment profile-znf_b1h_alignment/RLF-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RLF-201/pos_patterns.ENCSR718SDE_ChIP_RLF_K562_ENCSR602TYB_profile_pattern_4.n_270-vs-RLF-201.alignment profile-znf_b1h_alignment/RLF-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RLF-201/pos_patterns.ENCSR718SDE_ChIP_RLF_K562_ENCSR602TYB_profile_pattern_5.n_200-vs-RLF-201.alignment profile-znf_b1h_alignment/RLF-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RLF-201/pos_patterns.ENCSR718SDE_ChIP_RLF_K562_ENCSR602TYB_profile_pattern_6.n_184-vs-RLF-201.alignment profile-znf_b1h_alignment/RLF-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RLF-201/pos_patterns.ENCSR718SDE_ChIP_RLF_K562_ENCSR602TYB_profile_pattern_7.n_129-vs-RLF-201.alignment profile-znf_b1h_alignment/RLF-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RLF-201/pos_patterns.ENCSR718SDE_ChIP_RLF_K562_ENCSR602TYB_profile_pattern_8.n_107-vs-RLF-201.alignment profile-znf_b1h_alignment/RLF-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RLF-201/pos_patterns.ENCSR718SDE_ChIP_RLF_K562_ENCSR602TYB_profile_pattern_9.n_74-vs-RLF-201.alignment profile-znf_b1h_alignment/RLF-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RREB1-201/neg_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_profile_pattern_0.n_79-vs-RREB1-201.alignment profile-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RREB1-201/neg_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_profile_pattern_1.n_68-vs-RREB1-201.alignment profile-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RREB1-201/neg_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_profile_pattern_2.n_55-vs-RREB1-201.alignment profile-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RREB1-201/neg_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_profile_pattern_3.n_51-vs-RREB1-201.alignment profile-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RREB1-201/neg_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_profile_pattern_4.n_48-vs-RREB1-201.alignment profile-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RREB1-201/neg_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_profile_pattern_5.n_45-vs-RREB1-201.alignment profile-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RREB1-201/neg_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_profile_pattern_6.n_42-vs-RREB1-201.alignment profile-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RREB1-201/neg_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_profile_pattern_7.n_40-vs-RREB1-201.alignment profile-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RREB1-201/neg_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_profile_pattern_8.n_37-vs-RREB1-201.alignment profile-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RREB1-201/neg_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_profile_pattern_9.n_27-vs-RREB1-201.alignment profile-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RREB1-201/neg_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_profile_pattern_0.n_293-vs-RREB1-201.alignment profile-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RREB1-201/neg_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_profile_pattern_1.n_141-vs-RREB1-201.alignment profile-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RREB1-201/neg_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_profile_pattern_2.n_38-vs-RREB1-201.alignment profile-znf_b1h_alignment/RREB1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RREB1-201/neg_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_profile_pattern_3.n_35-vs-RREB1-201.alignment profile-znf_b1h_alignment/RREB1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RREB1-201/neg_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_profile_pattern_5.n_22-vs-RREB1-201.alignment profile-znf_b1h_alignment/RREB1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RREB1-203/neg_patterns.ENCSR180MUU_ChIP_RREB1_HepG2_ENCSR153EJY_profile_pattern_0.n_79-vs-RREB1-203.alignment profile-znf_b1h_alignment/RREB1-203/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RREB1-210/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_profile_pattern_5.n_293-vs-RREB1-210.alignment profile-znf_b1h_alignment/RREB1-210/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RREB1-210/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_profile_pattern_7.n_189-vs-RREB1-210.alignment profile-znf_b1h_alignment/RREB1-210/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/RREB1-210/pos_patterns.ENCSR250WFW_ChIP_RREB1_K562_ENCSR168PCB_profile_pattern_9.n_136-vs-RREB1-210.alignment profile-znf_b1h_alignment/RREB1-210/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SALL2-201/neg_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_profile_pattern_0.n_106-vs-SALL2-201.alignment profile-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SALL2-201/neg_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_profile_pattern_1.n_54-vs-SALL2-201.alignment profile-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SALL2-201/neg_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_profile_pattern_2.n_43-vs-SALL2-201.alignment profile-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SALL2-201/neg_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_profile_pattern_3.n_35-vs-SALL2-201.alignment profile-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SALL2-201/neg_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_profile_pattern_4.n_32-vs-SALL2-201.alignment profile-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SALL2-201/neg_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_profile_pattern_5.n_30-vs-SALL2-201.alignment profile-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SALL2-201/neg_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_profile_pattern_6.n_24-vs-SALL2-201.alignment profile-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SALL2-201/pos_patterns.ENCSR044FMM_ChIP_SALL2_HEK293_ENCSR497PXH_profile_pattern_0.n_481-vs-SALL2-201.alignment profile-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SALL2-201/pos_patterns.ENCSR044FMM_ChIP_SALL2_HEK293_ENCSR497PXH_profile_pattern_1.n_144-vs-SALL2-201.alignment profile-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SALL2-201/pos_patterns.ENCSR044FMM_ChIP_SALL2_HEK293_ENCSR497PXH_profile_pattern_2.n_85-vs-SALL2-201.alignment profile-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SALL2-201/pos_patterns.ENCSR044FMM_ChIP_SALL2_HEK293_ENCSR497PXH_profile_pattern_3.n_21-vs-SALL2-201.alignment profile-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SALL2-201/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_profile_pattern_0.n_1973-vs-SALL2-201.alignment profile-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SALL2-201/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_profile_pattern_10.n_272-vs-SALL2-201.alignment profile-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SALL2-201/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_profile_pattern_11.n_266-vs-SALL2-201.alignment profile-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SALL2-201/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_profile_pattern_12.n_244-vs-SALL2-201.alignment profile-znf_b1h_alignment/SALL2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SALL2-201/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_profile_pattern_13.n_165-vs-SALL2-201.alignment profile-znf_b1h_alignment/SALL2-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SALL2-204/pos_patterns.ENCSR062TDX_ChIP_SALL2_HepG2_ENCSR955HIV_profile_pattern_9.n_273-vs-SALL2-204.alignment profile-znf_b1h_alignment/SALL2-204/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT1-201/Hughes_GR_models_SCRT1_profile-neg.pattern_2.n_283-vs-SCRT1-201.alignment profile-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT1-201/Hughes_GR_models_SCRT1_profile-neg.pattern_3.n_280-vs-SCRT1-201.alignment profile-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT1-201/Hughes_GR_models_SCRT1_profile-neg.pattern_4.n_242-vs-SCRT1-201.alignment profile-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT1-201/Hughes_GR_models_SCRT1_profile-neg.pattern_5.n_131-vs-SCRT1-201.alignment profile-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT1-201/Hughes_GR_models_SCRT1_profile-neg.pattern_6.n_100-vs-SCRT1-201.alignment profile-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT1-201/Hughes_GR_models_SCRT1_profile-neg.pattern_7.n_99-vs-SCRT1-201.alignment profile-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT1-201/Hughes_GR_models_SCRT1_profile-neg.pattern_8.n_91-vs-SCRT1-201.alignment profile-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT1-201/Hughes_GR_models_SCRT1_profile-neg.pattern_9.n_74-vs-SCRT1-201.alignment profile-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT1-201/Hughes_GR_models_SCRT1_profile-pos.pattern_0.n_26232-vs-SCRT1-201.alignment profile-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT1-201/Hughes_GR_models_SCRT1_profile-pos.pattern_1.n_282-vs-SCRT1-201.alignment profile-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT1-201/Hughes_GR_models_SCRT1_profile-pos.pattern_2.n_263-vs-SCRT1-201.alignment profile-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT1-201/Hughes_GR_models_SCRT1_profile-pos.pattern_3.n_55-vs-SCRT1-201.alignment profile-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT1-201/Hughes_GR_models_SCRT1_profile-pos.pattern_4.n_26-vs-SCRT1-201.alignment profile-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT1-201/neg_patterns.ENCSR605MGM_ChIP_SCRT1_HEK293_ENCSR372ZFV_profile_pattern_0.n_39-vs-SCRT1-201.alignment profile-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT1-201/neg_patterns.ENCSR605MGM_ChIP_SCRT1_HEK293_ENCSR372ZFV_profile_pattern_1.n_38-vs-SCRT1-201.alignment profile-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT1-201/neg_patterns.ENCSR605MGM_ChIP_SCRT1_HEK293_ENCSR372ZFV_profile_pattern_2.n_36-vs-SCRT1-201.alignment profile-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT1-201/neg_patterns.ENCSR605MGM_ChIP_SCRT1_HEK293_ENCSR372ZFV_profile_pattern_3.n_23-vs-SCRT1-201.alignment profile-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT1-201/neg_patterns.ENCSR605MGM_ChIP_SCRT1_HEK293_ENCSR372ZFV_profile_pattern_4.n_20-vs-SCRT1-201.alignment profile-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT1-201/pos_patterns.ENCSR605MGM_ChIP_SCRT1_HEK293_ENCSR372ZFV_profile_pattern_0.n_17621-vs-SCRT1-201.alignment profile-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT1-201/pos_patterns.ENCSR605MGM_ChIP_SCRT1_HEK293_ENCSR372ZFV_profile_pattern_1.n_572-vs-SCRT1-201.alignment profile-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT1-201/pos_patterns.ENCSR605MGM_ChIP_SCRT1_HEK293_ENCSR372ZFV_profile_pattern_2.n_254-vs-SCRT1-201.alignment profile-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT1-201/pos_patterns.ENCSR605MGM_ChIP_SCRT1_HEK293_ENCSR372ZFV_profile_pattern_3.n_185-vs-SCRT1-201.alignment profile-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT1-201/pos_patterns.ENCSR605MGM_ChIP_SCRT1_HEK293_ENCSR372ZFV_profile_pattern_4.n_155-vs-SCRT1-201.alignment profile-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT1-201/pos_patterns.ENCSR605MGM_ChIP_SCRT1_HEK293_ENCSR372ZFV_profile_pattern_5.n_127-vs-SCRT1-201.alignment profile-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT1-201/pos_patterns.ENCSR605MGM_ChIP_SCRT1_HEK293_ENCSR372ZFV_profile_pattern_6.n_99-vs-SCRT1-201.alignment profile-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT1-201/pos_patterns.ENCSR605MGM_ChIP_SCRT1_HEK293_ENCSR372ZFV_profile_pattern_7.n_26-vs-SCRT1-201.alignment profile-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT1-201/pos_patterns.ENCSR605MGM_ChIP_SCRT1_HEK293_ENCSR372ZFV_profile_pattern_8.n_24-vs-SCRT1-201.alignment profile-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT1-201/pos_patterns.ENCSR605MGM_ChIP_SCRT1_HEK293_ENCSR372ZFV_profile_pattern_9.n_21-vs-SCRT1-201.alignment profile-znf_b1h_alignment/SCRT1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT2-201/neg_patterns.ENCSR338DGO_ChIP_SCRT2_HEK293_ENCSR305GED_profile_pattern_0.n_203-vs-SCRT2-201.alignment profile-znf_b1h_alignment/SCRT2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT2-201/neg_patterns.ENCSR338DGO_ChIP_SCRT2_HEK293_ENCSR305GED_profile_pattern_1.n_44-vs-SCRT2-201.alignment profile-znf_b1h_alignment/SCRT2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT2-201/neg_patterns.ENCSR338DGO_ChIP_SCRT2_HEK293_ENCSR305GED_profile_pattern_2.n_42-vs-SCRT2-201.alignment profile-znf_b1h_alignment/SCRT2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT2-201/neg_patterns.ENCSR338DGO_ChIP_SCRT2_HEK293_ENCSR305GED_profile_pattern_3.n_36-vs-SCRT2-201.alignment profile-znf_b1h_alignment/SCRT2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT2-201/neg_patterns.ENCSR338DGO_ChIP_SCRT2_HEK293_ENCSR305GED_profile_pattern_4.n_34-vs-SCRT2-201.alignment profile-znf_b1h_alignment/SCRT2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT2-201/neg_patterns.ENCSR338DGO_ChIP_SCRT2_HEK293_ENCSR305GED_profile_pattern_5.n_31-vs-SCRT2-201.alignment profile-znf_b1h_alignment/SCRT2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT2-201/neg_patterns.ENCSR338DGO_ChIP_SCRT2_HEK293_ENCSR305GED_profile_pattern_6.n_31-vs-SCRT2-201.alignment profile-znf_b1h_alignment/SCRT2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT2-201/pos_patterns.ENCSR338DGO_ChIP_SCRT2_HEK293_ENCSR305GED_profile_pattern_0.n_24071-vs-SCRT2-201.alignment profile-znf_b1h_alignment/SCRT2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT2-201/pos_patterns.ENCSR338DGO_ChIP_SCRT2_HEK293_ENCSR305GED_profile_pattern_10.n_49-vs-SCRT2-201.alignment profile-znf_b1h_alignment/SCRT2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT2-201/pos_patterns.ENCSR338DGO_ChIP_SCRT2_HEK293_ENCSR305GED_profile_pattern_11.n_23-vs-SCRT2-201.alignment profile-znf_b1h_alignment/SCRT2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT2-201/pos_patterns.ENCSR338DGO_ChIP_SCRT2_HEK293_ENCSR305GED_profile_pattern_1.n_1403-vs-SCRT2-201.alignment profile-znf_b1h_alignment/SCRT2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT2-201/pos_patterns.ENCSR338DGO_ChIP_SCRT2_HEK293_ENCSR305GED_profile_pattern_2.n_932-vs-SCRT2-201.alignment profile-znf_b1h_alignment/SCRT2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT2-201/pos_patterns.ENCSR338DGO_ChIP_SCRT2_HEK293_ENCSR305GED_profile_pattern_3.n_456-vs-SCRT2-201.alignment profile-znf_b1h_alignment/SCRT2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT2-201/pos_patterns.ENCSR338DGO_ChIP_SCRT2_HEK293_ENCSR305GED_profile_pattern_4.n_434-vs-SCRT2-201.alignment profile-znf_b1h_alignment/SCRT2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT2-201/pos_patterns.ENCSR338DGO_ChIP_SCRT2_HEK293_ENCSR305GED_profile_pattern_5.n_230-vs-SCRT2-201.alignment profile-znf_b1h_alignment/SCRT2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT2-201/pos_patterns.ENCSR338DGO_ChIP_SCRT2_HEK293_ENCSR305GED_profile_pattern_6.n_217-vs-SCRT2-201.alignment profile-znf_b1h_alignment/SCRT2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT2-201/pos_patterns.ENCSR338DGO_ChIP_SCRT2_HEK293_ENCSR305GED_profile_pattern_7.n_155-vs-SCRT2-201.alignment profile-znf_b1h_alignment/SCRT2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT2-201/pos_patterns.ENCSR338DGO_ChIP_SCRT2_HEK293_ENCSR305GED_profile_pattern_8.n_132-vs-SCRT2-201.alignment profile-znf_b1h_alignment/SCRT2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SCRT2-201/pos_patterns.ENCSR338DGO_ChIP_SCRT2_HEK293_ENCSR305GED_profile_pattern_9.n_92-vs-SCRT2-201.alignment profile-znf_b1h_alignment/SCRT2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/Hughes_GR_models_SP1_profile-pos.pattern_0.n_10569-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/Hughes_GR_models_SP1_profile-pos.pattern_10.n_30-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/Hughes_GR_models_SP1_profile-pos.pattern_1.n_8324-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/Hughes_GR_models_SP1_profile-pos.pattern_2.n_495-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/Hughes_GR_models_SP1_profile-pos.pattern_3.n_437-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/Hughes_GR_models_SP1_profile-pos.pattern_4.n_350-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/Hughes_GR_models_SP1_profile-pos.pattern_5.n_302-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/Hughes_GR_models_SP1_profile-pos.pattern_6.n_241-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/Hughes_GR_models_SP1_profile-pos.pattern_7.n_196-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/Hughes_GR_models_SP1_profile-pos.pattern_8.n_196-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/Hughes_GR_models_SP1_profile-pos.pattern_9.n_70-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/neg_patterns.ENCSR000BHK_ChIP_SP1_GM12878_ENCSR095LRJ_profile_pattern_0.n_34-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/neg_patterns.ENCSR000BHK_ChIP_SP1_GM12878_ENCSR095LRJ_profile_pattern_1.n_31-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/neg_patterns.ENCSR000BHK_ChIP_SP1_GM12878_ENCSR095LRJ_profile_pattern_3.n_30-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/neg_patterns.ENCSR583CGO_ChIP_SP1_WTC11_ENCSR786LMT_profile_pattern_1.n_39-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/neg_patterns.ENCSR583CGO_ChIP_SP1_WTC11_ENCSR786LMT_profile_pattern_4.n_23-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/neg_patterns.ENCSR729LGA_ChIP_SP1_MCF-7_ENCSR543HQM_profile_pattern_10.n_33-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/neg_patterns.ENCSR729LGA_ChIP_SP1_MCF-7_ENCSR543HQM_profile_pattern_5.n_82-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/neg_patterns.ENCSR729LGA_ChIP_SP1_MCF-7_ENCSR543HQM_profile_pattern_6.n_49-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/neg_patterns.ENCSR729LGA_ChIP_SP1_MCF-7_ENCSR543HQM_profile_pattern_7.n_39-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/neg_patterns.ENCSR729LGA_ChIP_SP1_MCF-7_ENCSR543HQM_profile_pattern_9.n_35-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR085IXF_ChIP_SP1_liver_ENCSR730HDS_profile_pattern_15.n_178-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR085IXF_ChIP_SP1_liver_ENCSR730HDS_profile_pattern_16.n_96-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR334KIQ_ChIP_SP1_HepG2_ENCSR359WFD_profile_pattern_4.n_51-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR334KIQ_ChIP_SP1_HepG2_ENCSR359WFD_profile_pattern_6.n_41-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR334KIQ_ChIP_SP1_HepG2_ENCSR359WFD_profile_pattern_7.n_39-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR334KIQ_ChIP_SP1_HepG2_ENCSR359WFD_profile_pattern_8.n_23-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR372IML_ChIP_SP1_K562_ENCSR955QBD_profile_pattern_10.n_124-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR372IML_ChIP_SP1_K562_ENCSR955QBD_profile_pattern_12.n_109-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR372IML_ChIP_SP1_K562_ENCSR955QBD_profile_pattern_13.n_90-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR372IML_ChIP_SP1_K562_ENCSR955QBD_profile_pattern_14.n_77-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR372IML_ChIP_SP1_K562_ENCSR955QBD_profile_pattern_16.n_36-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR372IML_ChIP_SP1_K562_ENCSR955QBD_profile_pattern_17.n_30-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR372IML_ChIP_SP1_K562_ENCSR955QBD_profile_pattern_18.n_25-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR372IML_ChIP_SP1_K562_ENCSR955QBD_profile_pattern_19.n_20-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR372IML_ChIP_SP1_K562_ENCSR955QBD_profile_pattern_1.n_2486-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR372IML_ChIP_SP1_K562_ENCSR955QBD_profile_pattern_2.n_927-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR372IML_ChIP_SP1_K562_ENCSR955QBD_profile_pattern_3.n_621-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR372IML_ChIP_SP1_K562_ENCSR955QBD_profile_pattern_4.n_477-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR372IML_ChIP_SP1_K562_ENCSR955QBD_profile_pattern_5.n_396-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR372IML_ChIP_SP1_K562_ENCSR955QBD_profile_pattern_6.n_361-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR372IML_ChIP_SP1_K562_ENCSR955QBD_profile_pattern_7.n_289-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR372IML_ChIP_SP1_K562_ENCSR955QBD_profile_pattern_9.n_158-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR386YIH_ChIP_SP1_liver_ENCSR764SPF_profile_pattern_10.n_660-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR386YIH_ChIP_SP1_liver_ENCSR764SPF_profile_pattern_11.n_510-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR386YIH_ChIP_SP1_liver_ENCSR764SPF_profile_pattern_12.n_120-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR386YIH_ChIP_SP1_liver_ENCSR764SPF_profile_pattern_13.n_110-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR386YIH_ChIP_SP1_liver_ENCSR764SPF_profile_pattern_15.n_82-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR583CGO_ChIP_SP1_WTC11_ENCSR786LMT_profile_pattern_16.n_119-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR583CGO_ChIP_SP1_WTC11_ENCSR786LMT_profile_pattern_18.n_96-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR583CGO_ChIP_SP1_WTC11_ENCSR786LMT_profile_pattern_19.n_95-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR583CGO_ChIP_SP1_WTC11_ENCSR786LMT_profile_pattern_1.n_2256-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR583CGO_ChIP_SP1_WTC11_ENCSR786LMT_profile_pattern_23.n_71-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR583CGO_ChIP_SP1_WTC11_ENCSR786LMT_profile_pattern_26.n_50-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR583CGO_ChIP_SP1_WTC11_ENCSR786LMT_profile_pattern_27.n_47-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR583CGO_ChIP_SP1_WTC11_ENCSR786LMT_profile_pattern_28.n_35-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR583CGO_ChIP_SP1_WTC11_ENCSR786LMT_profile_pattern_29.n_22-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR583CGO_ChIP_SP1_WTC11_ENCSR786LMT_profile_pattern_3.n_722-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP1-201/pos_patterns.ENCSR583CGO_ChIP_SP1_WTC11_ENCSR786LMT_profile_pattern_4.n_683-vs-SP1-201.alignment profile-znf_b1h_alignment/SP1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR807LQP_ChIP_SP2_HEK293_ENCSR154LJQ_profile_pattern_17.n_28-vs-SP2-201.alignment profile-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR807LQP_ChIP_SP2_HEK293_ENCSR154LJQ_profile_pattern_18.n_25-vs-SP2-201.alignment profile-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR807LQP_ChIP_SP2_HEK293_ENCSR154LJQ_profile_pattern_19.n_24-vs-SP2-201.alignment profile-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR807LQP_ChIP_SP2_HEK293_ENCSR154LJQ_profile_pattern_1.n_6337-vs-SP2-201.alignment profile-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR807LQP_ChIP_SP2_HEK293_ENCSR154LJQ_profile_pattern_20.n_22-vs-SP2-201.alignment profile-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR807LQP_ChIP_SP2_HEK293_ENCSR154LJQ_profile_pattern_2.n_3189-vs-SP2-201.alignment profile-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR807LQP_ChIP_SP2_HEK293_ENCSR154LJQ_profile_pattern_3.n_599-vs-SP2-201.alignment profile-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR807LQP_ChIP_SP2_HEK293_ENCSR154LJQ_profile_pattern_4.n_566-vs-SP2-201.alignment profile-znf_b1h_alignment/SP2-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR807LQP_ChIP_SP2_HEK293_ENCSR154LJQ_profile_pattern_8.n_243-vs-SP2-201.alignment profile-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR807LQP_ChIP_SP2_HEK293_ENCSR154LJQ_profile_pattern_9.n_243-vs-SP2-201.alignment profile-znf_b1h_alignment/SP2-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR946RZN_ChIP_SP2_HepG2_ENCSR052HWR_profile_pattern_11.n_62-vs-SP2-201.alignment profile-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR946RZN_ChIP_SP2_HepG2_ENCSR052HWR_profile_pattern_12.n_48-vs-SP2-201.alignment profile-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR946RZN_ChIP_SP2_HepG2_ENCSR052HWR_profile_pattern_13.n_43-vs-SP2-201.alignment profile-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR946RZN_ChIP_SP2_HepG2_ENCSR052HWR_profile_pattern_14.n_33-vs-SP2-201.alignment profile-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR946RZN_ChIP_SP2_HepG2_ENCSR052HWR_profile_pattern_15.n_31-vs-SP2-201.alignment profile-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR946RZN_ChIP_SP2_HepG2_ENCSR052HWR_profile_pattern_16.n_29-vs-SP2-201.alignment profile-znf_b1h_alignment/SP2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR946RZN_ChIP_SP2_HepG2_ENCSR052HWR_profile_pattern_17.n_29-vs-SP2-201.alignment profile-znf_b1h_alignment/SP2-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP2-201/pos_patterns.ENCSR946RZN_ChIP_SP2_HepG2_ENCSR052HWR_profile_pattern_1.n_3880-vs-SP2-201.alignment profile-znf_b1h_alignment/SP2-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP3-201/pos_patterns.ENCSR141PZA_ChIP_SP3_HEK293_ENCSR640UGN_profile_pattern_6.n_718-vs-SP3-201.alignment profile-znf_b1h_alignment/SP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP3-201/pos_patterns.ENCSR141PZA_ChIP_SP3_HEK293_ENCSR640UGN_profile_pattern_7.n_378-vs-SP3-201.alignment profile-znf_b1h_alignment/SP3-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP3-205/neg_patterns.ENCSR141PZA_ChIP_SP3_HEK293_ENCSR640UGN_profile_pattern_0.n_95-vs-SP3-205.alignment profile-znf_b1h_alignment/SP3-205/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP3-205/pos_patterns.ENCSR141PZA_ChIP_SP3_HEK293_ENCSR640UGN_profile_pattern_0.n_14082-vs-SP3-205.alignment profile-znf_b1h_alignment/SP3-205/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP3-205/pos_patterns.ENCSR141PZA_ChIP_SP3_HEK293_ENCSR640UGN_profile_pattern_13.n_103-vs-SP3-205.alignment profile-znf_b1h_alignment/SP3-205/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP3-205/pos_patterns.ENCSR141PZA_ChIP_SP3_HEK293_ENCSR640UGN_profile_pattern_17.n_84-vs-SP3-205.alignment profile-znf_b1h_alignment/SP3-205/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP3-205/pos_patterns.ENCSR141PZA_ChIP_SP3_HEK293_ENCSR640UGN_profile_pattern_19.n_23-vs-SP3-205.alignment profile-znf_b1h_alignment/SP3-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP3-205/pos_patterns.ENCSR141PZA_ChIP_SP3_HEK293_ENCSR640UGN_profile_pattern_1.n_1284-vs-SP3-205.alignment profile-znf_b1h_alignment/SP3-205/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP3-205/pos_patterns.ENCSR141PZA_ChIP_SP3_HEK293_ENCSR640UGN_profile_pattern_6.n_718-vs-SP3-205.alignment profile-znf_b1h_alignment/SP3-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/SP3-205/pos_patterns.ENCSR141PZA_ChIP_SP3_HEK293_ENCSR640UGN_profile_pattern_7.n_378-vs-SP3-205.alignment profile-znf_b1h_alignment/SP3-205/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/YY1-201/neg_patterns.ENCSR000BMH_ChIP_YY1_K562_ENCSR763WTY_profile_pattern_7.n_50-vs-YY1-201.alignment profile-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/YY1-201/neg_patterns.ENCSR000BMH_ChIP_YY1_K562_ENCSR763WTY_profile_pattern_8.n_36-vs-YY1-201.alignment profile-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/YY1-201/neg_patterns.ENCSR000BNP_ChIP_YY1_GM12878_ENCSR466HDF_profile_pattern_0.n_139-vs-YY1-201.alignment profile-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/YY1-201/neg_patterns.ENCSR000BNP_ChIP_YY1_GM12878_ENCSR466HDF_profile_pattern_10.n_36-vs-YY1-201.alignment profile-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/YY1-201/neg_patterns.ENCSR000BNP_ChIP_YY1_GM12878_ENCSR466HDF_profile_pattern_11.n_36-vs-YY1-201.alignment profile-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/YY1-201/neg_patterns.ENCSR000BNP_ChIP_YY1_GM12878_ENCSR466HDF_profile_pattern_12.n_31-vs-YY1-201.alignment profile-znf_b1h_alignment/YY1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/YY1-201/neg_patterns.ENCSR000BNP_ChIP_YY1_GM12878_ENCSR466HDF_profile_pattern_16.n_23-vs-YY1-201.alignment profile-znf_b1h_alignment/YY1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/YY1-201/neg_patterns.ENCSR000BNX_ChIP_YY1_HCT116_ENCSR976XZG_profile_pattern_5.n_29-vs-YY1-201.alignment profile-znf_b1h_alignment/YY1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/YY1-201/neg_patterns.ENCSR000BNX_ChIP_YY1_HCT116_ENCSR976XZG_profile_pattern_7.n_23-vs-YY1-201.alignment profile-znf_b1h_alignment/YY1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/YY1-201/neg_patterns.ENCSR000BPM_ChIP_YY1_A549_ENCSR623ODG_profile_pattern_0.n_587-vs-YY1-201.alignment profile-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/YY1-201/neg_patterns.ENCSR000BPM_ChIP_YY1_A549_ENCSR623ODG_profile_pattern_1.n_412-vs-YY1-201.alignment profile-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/YY1-201/neg_patterns.ENCSR000BPM_ChIP_YY1_A549_ENCSR623ODG_profile_pattern_2.n_148-vs-YY1-201.alignment profile-znf_b1h_alignment/YY1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/YY1-201/neg_patterns.ENCSR000BSM_ChIP_YY1_SK-N-SH_ENCSR098EIV_profile_pattern_2.n_28-vs-YY1-201.alignment profile-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/YY1-201/neg_patterns.ENCSR000BSY_ChIP_YY1_Ishikawa_ENCSR809DOC_profile_pattern_0.n_354-vs-YY1-201.alignment profile-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/YY1-201/neg_patterns.ENCSR000BSY_ChIP_YY1_Ishikawa_ENCSR809DOC_profile_pattern_10.n_42-vs-YY1-201.alignment profile-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/YY1-201/neg_patterns.ENCSR000BSY_ChIP_YY1_Ishikawa_ENCSR809DOC_profile_pattern_1.n_85-vs-YY1-201.alignment profile-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/YY1-201/neg_patterns.ENCSR000BSY_ChIP_YY1_Ishikawa_ENCSR809DOC_profile_pattern_2.n_79-vs-YY1-201.alignment profile-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/YY1-201/neg_patterns.ENCSR000BSY_ChIP_YY1_Ishikawa_ENCSR809DOC_profile_pattern_3.n_76-vs-YY1-201.alignment profile-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/YY1-201/neg_patterns.ENCSR000BSY_ChIP_YY1_Ishikawa_ENCSR809DOC_profile_pattern_4.n_61-vs-YY1-201.alignment profile-znf_b1h_alignment/YY1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/YY1-201/neg_patterns.ENCSR000BSY_ChIP_YY1_Ishikawa_ENCSR809DOC_profile_pattern_6.n_55-vs-YY1-201.alignment profile-znf_b1h_alignment/YY1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/YY1-201/neg_patterns.ENCSR000EUM_ChIP_YY1_GM12878_ENCSR401RIZ_profile_pattern_5.n_22-vs-YY1-201.alignment profile-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/YY1-201/neg_patterns.ENCSR000EWF_ChIP_YY1_K562_ENCSR911NSC_profile_pattern_0.n_577-vs-YY1-201.alignment profile-znf_b1h_alignment/YY1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/YY1-201/neg_patterns.ENCSR000EWF_ChIP_YY1_K562_ENCSR911NSC_profile_pattern_3.n_100-vs-YY1-201.alignment profile-znf_b1h_alignment/YY1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BSY_ChIP_YY1_Ishikawa_ENCSR809DOC_profile_pattern_2.n_1026-vs-YY1-201.alignment profile-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BSY_ChIP_YY1_Ishikawa_ENCSR809DOC_profile_pattern_3.n_554-vs-YY1-201.alignment profile-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BSY_ChIP_YY1_Ishikawa_ENCSR809DOC_profile_pattern_4.n_546-vs-YY1-201.alignment profile-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BSY_ChIP_YY1_Ishikawa_ENCSR809DOC_profile_pattern_5.n_518-vs-YY1-201.alignment profile-znf_b1h_alignment/YY1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR000BSY_ChIP_YY1_Ishikawa_ENCSR809DOC_profile_pattern_6.n_293-vs-YY1-201.alignment profile-znf_b1h_alignment/YY1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/YY1-201/pos_patterns.ENCSR859RAO_ChIP_YY1_HEK293_ENCSR972DQJ_profile_pattern_7.n_81-vs-YY1-201.alignment profile-znf_b1h_alignment/YY1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB20-201/neg_patterns.ENCSR460MBI_ChIP_ZBTB20_HEK293_ENCSR031BHK_profile_pattern_0.n_139-vs-ZBTB20-201.alignment profile-znf_b1h_alignment/ZBTB20-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB20-201/neg_patterns.ENCSR460MBI_ChIP_ZBTB20_HEK293_ENCSR031BHK_profile_pattern_1.n_137-vs-ZBTB20-201.alignment profile-znf_b1h_alignment/ZBTB20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB20-201/neg_patterns.ENCSR460MBI_ChIP_ZBTB20_HEK293_ENCSR031BHK_profile_pattern_2.n_123-vs-ZBTB20-201.alignment profile-znf_b1h_alignment/ZBTB20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB20-201/neg_patterns.ENCSR460MBI_ChIP_ZBTB20_HEK293_ENCSR031BHK_profile_pattern_3.n_96-vs-ZBTB20-201.alignment profile-znf_b1h_alignment/ZBTB20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB20-201/neg_patterns.ENCSR460MBI_ChIP_ZBTB20_HEK293_ENCSR031BHK_profile_pattern_4.n_76-vs-ZBTB20-201.alignment profile-znf_b1h_alignment/ZBTB20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB20-201/neg_patterns.ENCSR460MBI_ChIP_ZBTB20_HEK293_ENCSR031BHK_profile_pattern_5.n_50-vs-ZBTB20-201.alignment profile-znf_b1h_alignment/ZBTB20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB20-201/neg_patterns.ENCSR460MBI_ChIP_ZBTB20_HEK293_ENCSR031BHK_profile_pattern_6.n_46-vs-ZBTB20-201.alignment profile-znf_b1h_alignment/ZBTB20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB20-201/neg_patterns.ENCSR460MBI_ChIP_ZBTB20_HEK293_ENCSR031BHK_profile_pattern_7.n_42-vs-ZBTB20-201.alignment profile-znf_b1h_alignment/ZBTB20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB20-201/neg_patterns.ENCSR460MBI_ChIP_ZBTB20_HEK293_ENCSR031BHK_profile_pattern_8.n_40-vs-ZBTB20-201.alignment profile-znf_b1h_alignment/ZBTB20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB20-201/neg_patterns.ENCSR460MBI_ChIP_ZBTB20_HEK293_ENCSR031BHK_profile_pattern_9.n_39-vs-ZBTB20-201.alignment profile-znf_b1h_alignment/ZBTB20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB20-201/pos_patterns.ENCSR392TWV_ChIP_ZBTB20_HepG2_ENCSR718MVW_profile_pattern_0.n_3821-vs-ZBTB20-201.alignment profile-znf_b1h_alignment/ZBTB20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB20-201/pos_patterns.ENCSR392TWV_ChIP_ZBTB20_HepG2_ENCSR718MVW_profile_pattern_10.n_310-vs-ZBTB20-201.alignment profile-znf_b1h_alignment/ZBTB20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB20-201/pos_patterns.ENCSR392TWV_ChIP_ZBTB20_HepG2_ENCSR718MVW_profile_pattern_11.n_293-vs-ZBTB20-201.alignment profile-znf_b1h_alignment/ZBTB20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB20-201/pos_patterns.ENCSR392TWV_ChIP_ZBTB20_HepG2_ENCSR718MVW_profile_pattern_12.n_287-vs-ZBTB20-201.alignment profile-znf_b1h_alignment/ZBTB20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB20-201/pos_patterns.ENCSR392TWV_ChIP_ZBTB20_HepG2_ENCSR718MVW_profile_pattern_13.n_214-vs-ZBTB20-201.alignment profile-znf_b1h_alignment/ZBTB20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB20-201/pos_patterns.ENCSR392TWV_ChIP_ZBTB20_HepG2_ENCSR718MVW_profile_pattern_14.n_208-vs-ZBTB20-201.alignment profile-znf_b1h_alignment/ZBTB20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB20-201/pos_patterns.ENCSR392TWV_ChIP_ZBTB20_HepG2_ENCSR718MVW_profile_pattern_15.n_201-vs-ZBTB20-201.alignment profile-znf_b1h_alignment/ZBTB20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB20-201/pos_patterns.ENCSR392TWV_ChIP_ZBTB20_HepG2_ENCSR718MVW_profile_pattern_16.n_182-vs-ZBTB20-201.alignment profile-znf_b1h_alignment/ZBTB20-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB20-201/pos_patterns.ENCSR392TWV_ChIP_ZBTB20_HepG2_ENCSR718MVW_profile_pattern_17.n_180-vs-ZBTB20-201.alignment profile-znf_b1h_alignment/ZBTB20-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB2-201/pos_patterns.ENCSR230PTV_ChIP_ZBTB2_K562_ENCSR289WHI_profile_pattern_19.n_94-vs-ZBTB2-201.alignment profile-znf_b1h_alignment/ZBTB2-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB2-201/pos_patterns.ENCSR230PTV_ChIP_ZBTB2_K562_ENCSR289WHI_profile_pattern_1.n_2622-vs-ZBTB2-201.alignment profile-znf_b1h_alignment/ZBTB2-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB25-203/neg_patterns.ENCSR485OYR_ChIP_ZBTB25_HepG2_ENCSR734ZTT_profile_pattern_4.n_34-vs-ZBTB25-203.alignment profile-znf_b1h_alignment/ZBTB25-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB25-203/neg_patterns.ENCSR485OYR_ChIP_ZBTB25_HepG2_ENCSR734ZTT_profile_pattern_5.n_31-vs-ZBTB25-203.alignment profile-znf_b1h_alignment/ZBTB25-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB25-203/neg_patterns.ENCSR485OYR_ChIP_ZBTB25_HepG2_ENCSR734ZTT_profile_pattern_6.n_31-vs-ZBTB25-203.alignment profile-znf_b1h_alignment/ZBTB25-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB25-203/neg_patterns.ENCSR485OYR_ChIP_ZBTB25_HepG2_ENCSR734ZTT_profile_pattern_7.n_27-vs-ZBTB25-203.alignment profile-znf_b1h_alignment/ZBTB25-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB25-203/neg_patterns.ENCSR485OYR_ChIP_ZBTB25_HepG2_ENCSR734ZTT_profile_pattern_8.n_24-vs-ZBTB25-203.alignment profile-znf_b1h_alignment/ZBTB25-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB25-203/neg_patterns.ENCSR485OYR_ChIP_ZBTB25_HepG2_ENCSR734ZTT_profile_pattern_9.n_23-vs-ZBTB25-203.alignment profile-znf_b1h_alignment/ZBTB25-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB25-203/pos_patterns.ENCSR485OYR_ChIP_ZBTB25_HepG2_ENCSR734ZTT_profile_pattern_0.n_2596-vs-ZBTB25-203.alignment profile-znf_b1h_alignment/ZBTB25-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB25-203/pos_patterns.ENCSR485OYR_ChIP_ZBTB25_HepG2_ENCSR734ZTT_profile_pattern_10.n_246-vs-ZBTB25-203.alignment profile-znf_b1h_alignment/ZBTB25-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB25-203/pos_patterns.ENCSR485OYR_ChIP_ZBTB25_HepG2_ENCSR734ZTT_profile_pattern_11.n_65-vs-ZBTB25-203.alignment profile-znf_b1h_alignment/ZBTB25-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB25-203/pos_patterns.ENCSR485OYR_ChIP_ZBTB25_HepG2_ENCSR734ZTT_profile_pattern_12.n_48-vs-ZBTB25-203.alignment profile-znf_b1h_alignment/ZBTB25-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB25-203/pos_patterns.ENCSR485OYR_ChIP_ZBTB25_HepG2_ENCSR734ZTT_profile_pattern_13.n_28-vs-ZBTB25-203.alignment profile-znf_b1h_alignment/ZBTB25-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB25-203/pos_patterns.ENCSR485OYR_ChIP_ZBTB25_HepG2_ENCSR734ZTT_profile_pattern_1.n_2164-vs-ZBTB25-203.alignment profile-znf_b1h_alignment/ZBTB25-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB25-203/pos_patterns.ENCSR485OYR_ChIP_ZBTB25_HepG2_ENCSR734ZTT_profile_pattern_2.n_1931-vs-ZBTB25-203.alignment profile-znf_b1h_alignment/ZBTB25-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB25-203/pos_patterns.ENCSR485OYR_ChIP_ZBTB25_HepG2_ENCSR734ZTT_profile_pattern_3.n_1488-vs-ZBTB25-203.alignment profile-znf_b1h_alignment/ZBTB25-203/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB25-203/pos_patterns.ENCSR485OYR_ChIP_ZBTB25_HepG2_ENCSR734ZTT_profile_pattern_4.n_1223-vs-ZBTB25-203.alignment profile-znf_b1h_alignment/ZBTB25-203/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB25-203/pos_patterns.ENCSR485OYR_ChIP_ZBTB25_HepG2_ENCSR734ZTT_profile_pattern_6.n_481-vs-ZBTB25-203.alignment profile-znf_b1h_alignment/ZBTB25-203/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB26-201/pos_patterns.ENCSR115HLM_ChIP_ZBTB26_K562_ENCSR214WEP_profile_pattern_10.n_153-vs-ZBTB26-201.alignment profile-znf_b1h_alignment/ZBTB26-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB26-201/pos_patterns.ENCSR115HLM_ChIP_ZBTB26_K562_ENCSR214WEP_profile_pattern_13.n_82-vs-ZBTB26-201.alignment profile-znf_b1h_alignment/ZBTB26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB26-201/pos_patterns.ENCSR115HLM_ChIP_ZBTB26_K562_ENCSR214WEP_profile_pattern_14.n_55-vs-ZBTB26-201.alignment profile-znf_b1h_alignment/ZBTB26-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB26-201/pos_patterns.ENCSR115HLM_ChIP_ZBTB26_K562_ENCSR214WEP_profile_pattern_4.n_401-vs-ZBTB26-201.alignment profile-znf_b1h_alignment/ZBTB26-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB26-201/pos_patterns.ENCSR115HLM_ChIP_ZBTB26_K562_ENCSR214WEP_profile_pattern_9.n_157-vs-ZBTB26-201.alignment profile-znf_b1h_alignment/ZBTB26-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB26-201/pos_patterns.ENCSR229DYF_ChIP_ZBTB26_HEK293_ENCSR734DPC_profile_pattern_8.n_84-vs-ZBTB26-201.alignment profile-znf_b1h_alignment/ZBTB26-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB3-201/neg_patterns.ENCSR481AIK_ChIP_ZBTB3_HepG2_ENCSR171EVX_profile_pattern_3.n_28-vs-ZBTB3-201.alignment profile-znf_b1h_alignment/ZBTB3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB3-201/neg_patterns.ENCSR481AIK_ChIP_ZBTB3_HepG2_ENCSR171EVX_profile_pattern_4.n_27-vs-ZBTB3-201.alignment profile-znf_b1h_alignment/ZBTB3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB3-201/pos_patterns.ENCSR481AIK_ChIP_ZBTB3_HepG2_ENCSR171EVX_profile_pattern_0.n_1451-vs-ZBTB3-201.alignment profile-znf_b1h_alignment/ZBTB3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB3-201/pos_patterns.ENCSR481AIK_ChIP_ZBTB3_HepG2_ENCSR171EVX_profile_pattern_10.n_175-vs-ZBTB3-201.alignment profile-znf_b1h_alignment/ZBTB3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB3-201/pos_patterns.ENCSR481AIK_ChIP_ZBTB3_HepG2_ENCSR171EVX_profile_pattern_11.n_153-vs-ZBTB3-201.alignment profile-znf_b1h_alignment/ZBTB3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB3-201/pos_patterns.ENCSR481AIK_ChIP_ZBTB3_HepG2_ENCSR171EVX_profile_pattern_12.n_145-vs-ZBTB3-201.alignment profile-znf_b1h_alignment/ZBTB3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB3-201/pos_patterns.ENCSR481AIK_ChIP_ZBTB3_HepG2_ENCSR171EVX_profile_pattern_13.n_141-vs-ZBTB3-201.alignment profile-znf_b1h_alignment/ZBTB3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB3-201/pos_patterns.ENCSR481AIK_ChIP_ZBTB3_HepG2_ENCSR171EVX_profile_pattern_14.n_104-vs-ZBTB3-201.alignment profile-znf_b1h_alignment/ZBTB3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB3-201/pos_patterns.ENCSR481AIK_ChIP_ZBTB3_HepG2_ENCSR171EVX_profile_pattern_15.n_99-vs-ZBTB3-201.alignment profile-znf_b1h_alignment/ZBTB3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB3-201/pos_patterns.ENCSR481AIK_ChIP_ZBTB3_HepG2_ENCSR171EVX_profile_pattern_16.n_82-vs-ZBTB3-201.alignment profile-znf_b1h_alignment/ZBTB3-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB3-201/pos_patterns.ENCSR481AIK_ChIP_ZBTB3_HepG2_ENCSR171EVX_profile_pattern_18.n_63-vs-ZBTB3-201.alignment profile-znf_b1h_alignment/ZBTB3-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB3-201/pos_patterns.ENCSR481AIK_ChIP_ZBTB3_HepG2_ENCSR171EVX_profile_pattern_2.n_623-vs-ZBTB3-201.alignment profile-znf_b1h_alignment/ZBTB3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB3-201/pos_patterns.ENCSR481AIK_ChIP_ZBTB3_HepG2_ENCSR171EVX_profile_pattern_3.n_579-vs-ZBTB3-201.alignment profile-znf_b1h_alignment/ZBTB3-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/neg_patterns.ENCSR345YWJ_ChIP_ZBTB33_liver_ENCSR900SAH_profile_pattern_2.n_79-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/neg_patterns.ENCSR345YWJ_ChIP_ZBTB33_liver_ENCSR900SAH_profile_pattern_3.n_77-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/neg_patterns.ENCSR345YWJ_ChIP_ZBTB33_liver_ENCSR900SAH_profile_pattern_5.n_33-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/neg_patterns.ENCSR345YWJ_ChIP_ZBTB33_liver_ENCSR900SAH_profile_pattern_6.n_30-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/neg_patterns.ENCSR345YWJ_ChIP_ZBTB33_liver_ENCSR900SAH_profile_pattern_7.n_24-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/neg_patterns.ENCSR421DAO_ChIP_ZBTB33_HepG2_ENCSR169EGG_profile_pattern_0.n_233-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/neg_patterns.ENCSR421DAO_ChIP_ZBTB33_HepG2_ENCSR169EGG_profile_pattern_1.n_169-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/neg_patterns.ENCSR421DAO_ChIP_ZBTB33_HepG2_ENCSR169EGG_profile_pattern_2.n_167-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/neg_patterns.ENCSR421DAO_ChIP_ZBTB33_HepG2_ENCSR169EGG_profile_pattern_4.n_114-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/neg_patterns.ENCSR421DAO_ChIP_ZBTB33_HepG2_ENCSR169EGG_profile_pattern_5.n_47-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/neg_patterns.ENCSR516HUP_ChIP_ZBTB33_liver_ENCSR700BQI_profile_pattern_0.n_48-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/neg_patterns.ENCSR516HUP_ChIP_ZBTB33_liver_ENCSR700BQI_profile_pattern_2.n_38-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/neg_patterns.ENCSR516HUP_ChIP_ZBTB33_liver_ENCSR700BQI_profile_pattern_3.n_37-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BHC_ChIP_ZBTB33_GM12878_ENCSR996JFB_profile_pattern_2.n_242-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BHC_ChIP_ZBTB33_GM12878_ENCSR996JFB_profile_pattern_3.n_190-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BHC_ChIP_ZBTB33_GM12878_ENCSR996JFB_profile_pattern_4.n_34-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BHC_ChIP_ZBTB33_GM12878_ENCSR996JFB_profile_pattern_5.n_24-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BHC_ChIP_ZBTB33_GM12878_ENCSR996JFB_profile_pattern_6.n_24-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BHC_ChIP_ZBTB33_GM12878_ENCSR996JFB_profile_pattern_7.n_22-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BHR_ChIP_ZBTB33_HepG2_ENCSR936MXU_profile_pattern_0.n_1193-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BHR_ChIP_ZBTB33_HepG2_ENCSR936MXU_profile_pattern_10.n_25-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BHR_ChIP_ZBTB33_HepG2_ENCSR936MXU_profile_pattern_1.n_119-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BHR_ChIP_ZBTB33_HepG2_ENCSR936MXU_profile_pattern_2.n_103-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BHR_ChIP_ZBTB33_HepG2_ENCSR936MXU_profile_pattern_3.n_95-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BHR_ChIP_ZBTB33_HepG2_ENCSR936MXU_profile_pattern_4.n_70-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BHR_ChIP_ZBTB33_HepG2_ENCSR936MXU_profile_pattern_5.n_69-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BHR_ChIP_ZBTB33_HepG2_ENCSR936MXU_profile_pattern_6.n_67-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BHR_ChIP_ZBTB33_HepG2_ENCSR936MXU_profile_pattern_7.n_59-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BHR_ChIP_ZBTB33_HepG2_ENCSR936MXU_profile_pattern_8.n_53-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BHR_ChIP_ZBTB33_HepG2_ENCSR936MXU_profile_pattern_9.n_52-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BKF_ChIP_ZBTB33_K562_ENCSR933IYO_profile_pattern_0.n_2400-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BKF_ChIP_ZBTB33_K562_ENCSR933IYO_profile_pattern_10.n_31-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BKF_ChIP_ZBTB33_K562_ENCSR933IYO_profile_pattern_11.n_27-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BKF_ChIP_ZBTB33_K562_ENCSR933IYO_profile_pattern_1.n_275-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BKF_ChIP_ZBTB33_K562_ENCSR933IYO_profile_pattern_2.n_260-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BKF_ChIP_ZBTB33_K562_ENCSR933IYO_profile_pattern_3.n_183-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BKF_ChIP_ZBTB33_K562_ENCSR933IYO_profile_pattern_4.n_160-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BKF_ChIP_ZBTB33_K562_ENCSR933IYO_profile_pattern_5.n_78-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BKF_ChIP_ZBTB33_K562_ENCSR933IYO_profile_pattern_6.n_74-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BKF_ChIP_ZBTB33_K562_ENCSR933IYO_profile_pattern_7.n_57-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BKF_ChIP_ZBTB33_K562_ENCSR933IYO_profile_pattern_8.n_40-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BKF_ChIP_ZBTB33_K562_ENCSR933IYO_profile_pattern_9.n_34-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BNA_ChIP_ZBTB33_HepG2_ENCSR045NYB_profile_pattern_0.n_1600-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BNA_ChIP_ZBTB33_HepG2_ENCSR045NYB_profile_pattern_1.n_330-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BNA_ChIP_ZBTB33_HepG2_ENCSR045NYB_profile_pattern_2.n_111-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BNA_ChIP_ZBTB33_HepG2_ENCSR045NYB_profile_pattern_3.n_47-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BNA_ChIP_ZBTB33_HepG2_ENCSR045NYB_profile_pattern_4.n_44-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BNA_ChIP_ZBTB33_HepG2_ENCSR045NYB_profile_pattern_5.n_38-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BNY_ChIP_ZBTB33_HCT116_ENCSR232OWT_profile_pattern_0.n_1688-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BNY_ChIP_ZBTB33_HCT116_ENCSR232OWT_profile_pattern_10.n_30-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BNY_ChIP_ZBTB33_HCT116_ENCSR232OWT_profile_pattern_1.n_1073-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BTS_ChIP_ZBTB33_SK-N-SH_ENCSR546ZGT_profile_pattern_4.n_371-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BTS_ChIP_ZBTB33_SK-N-SH_ENCSR546ZGT_profile_pattern_5.n_219-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BTS_ChIP_ZBTB33_SK-N-SH_ENCSR546ZGT_profile_pattern_6.n_93-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BTS_ChIP_ZBTB33_SK-N-SH_ENCSR546ZGT_profile_pattern_7.n_61-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR000BTS_ChIP_ZBTB33_SK-N-SH_ENCSR546ZGT_profile_pattern_8.n_28-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR231YFE_ChIP_ZBTB33_MCF-7_ENCSR578HAP_profile_pattern_0.n_7224-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR231YFE_ChIP_ZBTB33_MCF-7_ENCSR578HAP_profile_pattern_10.n_41-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR231YFE_ChIP_ZBTB33_MCF-7_ENCSR578HAP_profile_pattern_11.n_41-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR231YFE_ChIP_ZBTB33_MCF-7_ENCSR578HAP_profile_pattern_12.n_35-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR231YFE_ChIP_ZBTB33_MCF-7_ENCSR578HAP_profile_pattern_13.n_29-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR231YFE_ChIP_ZBTB33_MCF-7_ENCSR578HAP_profile_pattern_14.n_23-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR231YFE_ChIP_ZBTB33_MCF-7_ENCSR578HAP_profile_pattern_1.n_945-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR231YFE_ChIP_ZBTB33_MCF-7_ENCSR578HAP_profile_pattern_2.n_279-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR231YFE_ChIP_ZBTB33_MCF-7_ENCSR578HAP_profile_pattern_3.n_200-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR231YFE_ChIP_ZBTB33_MCF-7_ENCSR578HAP_profile_pattern_4.n_193-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR231YFE_ChIP_ZBTB33_MCF-7_ENCSR578HAP_profile_pattern_5.n_150-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR231YFE_ChIP_ZBTB33_MCF-7_ENCSR578HAP_profile_pattern_6.n_144-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR231YFE_ChIP_ZBTB33_MCF-7_ENCSR578HAP_profile_pattern_7.n_89-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR231YFE_ChIP_ZBTB33_MCF-7_ENCSR578HAP_profile_pattern_8.n_64-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR231YFE_ChIP_ZBTB33_MCF-7_ENCSR578HAP_profile_pattern_9.n_41-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR345YWJ_ChIP_ZBTB33_liver_ENCSR900SAH_profile_pattern_0.n_1852-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR345YWJ_ChIP_ZBTB33_liver_ENCSR900SAH_profile_pattern_10.n_82-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR345YWJ_ChIP_ZBTB33_liver_ENCSR900SAH_profile_pattern_11.n_57-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR345YWJ_ChIP_ZBTB33_liver_ENCSR900SAH_profile_pattern_12.n_44-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR345YWJ_ChIP_ZBTB33_liver_ENCSR900SAH_profile_pattern_13.n_42-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR345YWJ_ChIP_ZBTB33_liver_ENCSR900SAH_profile_pattern_14.n_41-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR345YWJ_ChIP_ZBTB33_liver_ENCSR900SAH_profile_pattern_1.n_308-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB33-201/pos_patterns.ENCSR345YWJ_ChIP_ZBTB33_liver_ENCSR900SAH_profile_pattern_2.n_231-vs-ZBTB33-201.alignment profile-znf_b1h_alignment/ZBTB33-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB39-201/neg_patterns.ENCSR087NSZ_ChIP_ZBTB39_HepG2_ENCSR117FOJ_profile_pattern_19.n_25-vs-ZBTB39-201.alignment profile-znf_b1h_alignment/ZBTB39-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB39-201/neg_patterns.ENCSR087NSZ_ChIP_ZBTB39_HepG2_ENCSR117FOJ_profile_pattern_1.n_310-vs-ZBTB39-201.alignment profile-znf_b1h_alignment/ZBTB39-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB39-201/neg_patterns.ENCSR087NSZ_ChIP_ZBTB39_HepG2_ENCSR117FOJ_profile_pattern_20.n_23-vs-ZBTB39-201.alignment profile-znf_b1h_alignment/ZBTB39-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB39-201/neg_patterns.ENCSR087NSZ_ChIP_ZBTB39_HepG2_ENCSR117FOJ_profile_pattern_21.n_22-vs-ZBTB39-201.alignment profile-znf_b1h_alignment/ZBTB39-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB39-201/neg_patterns.ENCSR087NSZ_ChIP_ZBTB39_HepG2_ENCSR117FOJ_profile_pattern_2.n_147-vs-ZBTB39-201.alignment profile-znf_b1h_alignment/ZBTB39-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB39-201/neg_patterns.ENCSR087NSZ_ChIP_ZBTB39_HepG2_ENCSR117FOJ_profile_pattern_3.n_85-vs-ZBTB39-201.alignment profile-znf_b1h_alignment/ZBTB39-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB39-201/neg_patterns.ENCSR087NSZ_ChIP_ZBTB39_HepG2_ENCSR117FOJ_profile_pattern_4.n_72-vs-ZBTB39-201.alignment profile-znf_b1h_alignment/ZBTB39-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB39-201/neg_patterns.ENCSR087NSZ_ChIP_ZBTB39_HepG2_ENCSR117FOJ_profile_pattern_5.n_64-vs-ZBTB39-201.alignment profile-znf_b1h_alignment/ZBTB39-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB39-201/neg_patterns.ENCSR087NSZ_ChIP_ZBTB39_HepG2_ENCSR117FOJ_profile_pattern_6.n_58-vs-ZBTB39-201.alignment profile-znf_b1h_alignment/ZBTB39-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB39-201/neg_patterns.ENCSR087NSZ_ChIP_ZBTB39_HepG2_ENCSR117FOJ_profile_pattern_7.n_55-vs-ZBTB39-201.alignment profile-znf_b1h_alignment/ZBTB39-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB39-201/neg_patterns.ENCSR087NSZ_ChIP_ZBTB39_HepG2_ENCSR117FOJ_profile_pattern_8.n_51-vs-ZBTB39-201.alignment profile-znf_b1h_alignment/ZBTB39-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB39-201/neg_patterns.ENCSR087NSZ_ChIP_ZBTB39_HepG2_ENCSR117FOJ_profile_pattern_9.n_50-vs-ZBTB39-201.alignment profile-znf_b1h_alignment/ZBTB39-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB39-201/pos_patterns.ENCSR087NSZ_ChIP_ZBTB39_HepG2_ENCSR117FOJ_profile_pattern_0.n_1876-vs-ZBTB39-201.alignment profile-znf_b1h_alignment/ZBTB39-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB39-201/pos_patterns.ENCSR087NSZ_ChIP_ZBTB39_HepG2_ENCSR117FOJ_profile_pattern_10.n_81-vs-ZBTB39-201.alignment profile-znf_b1h_alignment/ZBTB39-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB39-201/pos_patterns.ENCSR087NSZ_ChIP_ZBTB39_HepG2_ENCSR117FOJ_profile_pattern_11.n_29-vs-ZBTB39-201.alignment profile-znf_b1h_alignment/ZBTB39-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB39-201/pos_patterns.ENCSR087NSZ_ChIP_ZBTB39_HepG2_ENCSR117FOJ_profile_pattern_12.n_27-vs-ZBTB39-201.alignment profile-znf_b1h_alignment/ZBTB39-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB39-201/pos_patterns.ENCSR087NSZ_ChIP_ZBTB39_HepG2_ENCSR117FOJ_profile_pattern_13.n_25-vs-ZBTB39-201.alignment profile-znf_b1h_alignment/ZBTB39-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB39-201/pos_patterns.ENCSR087NSZ_ChIP_ZBTB39_HepG2_ENCSR117FOJ_profile_pattern_14.n_21-vs-ZBTB39-201.alignment profile-znf_b1h_alignment/ZBTB39-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB39-201/pos_patterns.ENCSR087NSZ_ChIP_ZBTB39_HepG2_ENCSR117FOJ_profile_pattern_15.n_21-vs-ZBTB39-201.alignment profile-znf_b1h_alignment/ZBTB39-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB39-201/pos_patterns.ENCSR087NSZ_ChIP_ZBTB39_HepG2_ENCSR117FOJ_profile_pattern_1.n_1606-vs-ZBTB39-201.alignment profile-znf_b1h_alignment/ZBTB39-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB39-201/pos_patterns.ENCSR087NSZ_ChIP_ZBTB39_HepG2_ENCSR117FOJ_profile_pattern_2.n_1563-vs-ZBTB39-201.alignment profile-znf_b1h_alignment/ZBTB39-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB39-201/pos_patterns.ENCSR087NSZ_ChIP_ZBTB39_HepG2_ENCSR117FOJ_profile_pattern_3.n_698-vs-ZBTB39-201.alignment profile-znf_b1h_alignment/ZBTB39-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB39-201/pos_patterns.ENCSR087NSZ_ChIP_ZBTB39_HepG2_ENCSR117FOJ_profile_pattern_4.n_449-vs-ZBTB39-201.alignment profile-znf_b1h_alignment/ZBTB39-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR158RYZ_ChIP_ZBTB40_K562_ENCSR512YWH_profile_pattern_7.n_189-vs-ZBTB40-201.alignment profile-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR158RYZ_ChIP_ZBTB40_K562_ENCSR512YWH_profile_pattern_8.n_180-vs-ZBTB40-201.alignment profile-znf_b1h_alignment/ZBTB40-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR189YYK_ChIP_ZBTB40_GM12878_ENCSR823DBW_profile_pattern_0.n_437-vs-ZBTB40-201.alignment profile-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR189YYK_ChIP_ZBTB40_GM12878_ENCSR823DBW_profile_pattern_1.n_358-vs-ZBTB40-201.alignment profile-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR189YYK_ChIP_ZBTB40_GM12878_ENCSR823DBW_profile_pattern_2.n_244-vs-ZBTB40-201.alignment profile-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR189YYK_ChIP_ZBTB40_GM12878_ENCSR823DBW_profile_pattern_3.n_95-vs-ZBTB40-201.alignment profile-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR189YYK_ChIP_ZBTB40_GM12878_ENCSR823DBW_profile_pattern_4.n_93-vs-ZBTB40-201.alignment profile-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR189YYK_ChIP_ZBTB40_GM12878_ENCSR823DBW_profile_pattern_5.n_92-vs-ZBTB40-201.alignment profile-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR189YYK_ChIP_ZBTB40_GM12878_ENCSR823DBW_profile_pattern_6.n_87-vs-ZBTB40-201.alignment profile-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_profile_pattern_0.n_614-vs-ZBTB40-201.alignment profile-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_profile_pattern_10.n_121-vs-ZBTB40-201.alignment profile-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_profile_pattern_11.n_97-vs-ZBTB40-201.alignment profile-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_profile_pattern_12.n_92-vs-ZBTB40-201.alignment profile-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_profile_pattern_13.n_83-vs-ZBTB40-201.alignment profile-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_profile_pattern_14.n_70-vs-ZBTB40-201.alignment profile-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_profile_pattern_15.n_69-vs-ZBTB40-201.alignment profile-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_profile_pattern_16.n_65-vs-ZBTB40-201.alignment profile-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_profile_pattern_17.n_60-vs-ZBTB40-201.alignment profile-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_profile_pattern_18.n_58-vs-ZBTB40-201.alignment profile-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_profile_pattern_19.n_54-vs-ZBTB40-201.alignment profile-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_profile_pattern_1.n_490-vs-ZBTB40-201.alignment profile-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_profile_pattern_20.n_43-vs-ZBTB40-201.alignment profile-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_profile_pattern_21.n_37-vs-ZBTB40-201.alignment profile-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_profile_pattern_22.n_27-vs-ZBTB40-201.alignment profile-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_profile_pattern_23.n_25-vs-ZBTB40-201.alignment profile-znf_b1h_alignment/ZBTB40-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR318LVG_ChIP_ZBTB40_MCF-7_ENCSR580KUK_profile_pattern_7.n_85-vs-ZBTB40-201.alignment profile-znf_b1h_alignment/ZBTB40-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB40-201/neg_patterns.ENCSR318LVG_ChIP_ZBTB40_MCF-7_ENCSR580KUK_profile_pattern_9.n_39-vs-ZBTB40-201.alignment profile-znf_b1h_alignment/ZBTB40-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR158RYZ_ChIP_ZBTB40_K562_ENCSR512YWH_profile_pattern_6.n_859-vs-ZBTB40-201.alignment profile-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR158RYZ_ChIP_ZBTB40_K562_ENCSR512YWH_profile_pattern_7.n_737-vs-ZBTB40-201.alignment profile-znf_b1h_alignment/ZBTB40-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR200AWS_ChIP_ZBTB40_HepG2_ENCSR351SGY_profile_pattern_8.n_377-vs-ZBTB40-201.alignment profile-znf_b1h_alignment/ZBTB40-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR237VLT_ChIP_ZBTB40_K562_ENCSR087JVK_profile_pattern_0.n_10506-vs-ZBTB40-201.alignment profile-znf_b1h_alignment/ZBTB40-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB40-201/pos_patterns.ENCSR237VLT_ChIP_ZBTB40_K562_ENCSR087JVK_profile_pattern_10.n_77-vs-ZBTB40-201.alignment profile-znf_b1h_alignment/ZBTB40-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB43-201/neg_patterns.ENCSR199PXS_ChIP_ZBTB43_WTC11_ENCSR294RFH_profile_pattern_0.n_29-vs-ZBTB43-201.alignment profile-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB43-201/neg_patterns.ENCSR199PXS_ChIP_ZBTB43_WTC11_ENCSR294RFH_profile_pattern_1.n_25-vs-ZBTB43-201.alignment profile-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB43-201/neg_patterns.ENCSR199PXS_ChIP_ZBTB43_WTC11_ENCSR294RFH_profile_pattern_2.n_21-vs-ZBTB43-201.alignment profile-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR173USN_ChIP_ZBTB43_HepG2_ENCSR113OHG_profile_pattern_0.n_3609-vs-ZBTB43-201.alignment profile-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR173USN_ChIP_ZBTB43_HepG2_ENCSR113OHG_profile_pattern_10.n_341-vs-ZBTB43-201.alignment profile-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR173USN_ChIP_ZBTB43_HepG2_ENCSR113OHG_profile_pattern_11.n_330-vs-ZBTB43-201.alignment profile-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR173USN_ChIP_ZBTB43_HepG2_ENCSR113OHG_profile_pattern_12.n_305-vs-ZBTB43-201.alignment profile-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR173USN_ChIP_ZBTB43_HepG2_ENCSR113OHG_profile_pattern_13.n_291-vs-ZBTB43-201.alignment profile-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR173USN_ChIP_ZBTB43_HepG2_ENCSR113OHG_profile_pattern_14.n_228-vs-ZBTB43-201.alignment profile-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR173USN_ChIP_ZBTB43_HepG2_ENCSR113OHG_profile_pattern_15.n_220-vs-ZBTB43-201.alignment profile-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR173USN_ChIP_ZBTB43_HepG2_ENCSR113OHG_profile_pattern_16.n_215-vs-ZBTB43-201.alignment profile-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR173USN_ChIP_ZBTB43_HepG2_ENCSR113OHG_profile_pattern_17.n_173-vs-ZBTB43-201.alignment profile-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR173USN_ChIP_ZBTB43_HepG2_ENCSR113OHG_profile_pattern_18.n_159-vs-ZBTB43-201.alignment profile-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR173USN_ChIP_ZBTB43_HepG2_ENCSR113OHG_profile_pattern_19.n_115-vs-ZBTB43-201.alignment profile-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR173USN_ChIP_ZBTB43_HepG2_ENCSR113OHG_profile_pattern_1.n_1829-vs-ZBTB43-201.alignment profile-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR173USN_ChIP_ZBTB43_HepG2_ENCSR113OHG_profile_pattern_20.n_70-vs-ZBTB43-201.alignment profile-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR173USN_ChIP_ZBTB43_HepG2_ENCSR113OHG_profile_pattern_21.n_67-vs-ZBTB43-201.alignment profile-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR173USN_ChIP_ZBTB43_HepG2_ENCSR113OHG_profile_pattern_22.n_48-vs-ZBTB43-201.alignment profile-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR173USN_ChIP_ZBTB43_HepG2_ENCSR113OHG_profile_pattern_23.n_26-vs-ZBTB43-201.alignment profile-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR173USN_ChIP_ZBTB43_HepG2_ENCSR113OHG_profile_pattern_24.n_25-vs-ZBTB43-201.alignment profile-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR173USN_ChIP_ZBTB43_HepG2_ENCSR113OHG_profile_pattern_25.n_21-vs-ZBTB43-201.alignment profile-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR173USN_ChIP_ZBTB43_HepG2_ENCSR113OHG_profile_pattern_2.n_1773-vs-ZBTB43-201.alignment profile-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR173USN_ChIP_ZBTB43_HepG2_ENCSR113OHG_profile_pattern_3.n_1514-vs-ZBTB43-201.alignment profile-znf_b1h_alignment/ZBTB43-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB43-201/pos_patterns.ENCSR173USN_ChIP_ZBTB43_HepG2_ENCSR113OHG_profile_pattern_4.n_1247-vs-ZBTB43-201.alignment profile-znf_b1h_alignment/ZBTB43-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB48-202/neg_patterns.ENCSR781EQJ_ChIP_ZBTB48_HEK293_ENCSR798RSV_profile_pattern_2.n_46-vs-ZBTB48-202.alignment profile-znf_b1h_alignment/ZBTB48-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB48-202/neg_patterns.ENCSR781EQJ_ChIP_ZBTB48_HEK293_ENCSR798RSV_profile_pattern_3.n_38-vs-ZBTB48-202.alignment profile-znf_b1h_alignment/ZBTB48-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB48-202/neg_patterns.ENCSR781EQJ_ChIP_ZBTB48_HEK293_ENCSR798RSV_profile_pattern_4.n_35-vs-ZBTB48-202.alignment profile-znf_b1h_alignment/ZBTB48-202/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB48-202/pos_patterns.ENCSR781EQJ_ChIP_ZBTB48_HEK293_ENCSR798RSV_profile_pattern_0.n_16206-vs-ZBTB48-202.alignment profile-znf_b1h_alignment/ZBTB48-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB48-202/pos_patterns.ENCSR781EQJ_ChIP_ZBTB48_HEK293_ENCSR798RSV_profile_pattern_10.n_88-vs-ZBTB48-202.alignment profile-znf_b1h_alignment/ZBTB48-202/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB5-201/neg_patterns.ENCSR786OQY_ChIP_ZBTB5_K562_ENCSR012UFW_profile_pattern_5.n_30-vs-ZBTB5-201.alignment profile-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB5-201/neg_patterns.ENCSR786OQY_ChIP_ZBTB5_K562_ENCSR012UFW_profile_pattern_6.n_28-vs-ZBTB5-201.alignment profile-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR389PWB_ChIP_ZBTB5_K562_ENCSR473KQM_profile_pattern_0.n_738-vs-ZBTB5-201.alignment profile-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR389PWB_ChIP_ZBTB5_K562_ENCSR473KQM_profile_pattern_1.n_380-vs-ZBTB5-201.alignment profile-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR389PWB_ChIP_ZBTB5_K562_ENCSR473KQM_profile_pattern_2.n_189-vs-ZBTB5-201.alignment profile-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR389PWB_ChIP_ZBTB5_K562_ENCSR473KQM_profile_pattern_3.n_117-vs-ZBTB5-201.alignment profile-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR389PWB_ChIP_ZBTB5_K562_ENCSR473KQM_profile_pattern_4.n_94-vs-ZBTB5-201.alignment profile-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR389PWB_ChIP_ZBTB5_K562_ENCSR473KQM_profile_pattern_5.n_94-vs-ZBTB5-201.alignment profile-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR786OQY_ChIP_ZBTB5_K562_ENCSR012UFW_profile_pattern_0.n_991-vs-ZBTB5-201.alignment profile-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR786OQY_ChIP_ZBTB5_K562_ENCSR012UFW_profile_pattern_10.n_86-vs-ZBTB5-201.alignment profile-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR786OQY_ChIP_ZBTB5_K562_ENCSR012UFW_profile_pattern_11.n_44-vs-ZBTB5-201.alignment profile-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR786OQY_ChIP_ZBTB5_K562_ENCSR012UFW_profile_pattern_12.n_42-vs-ZBTB5-201.alignment profile-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR786OQY_ChIP_ZBTB5_K562_ENCSR012UFW_profile_pattern_13.n_36-vs-ZBTB5-201.alignment profile-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR786OQY_ChIP_ZBTB5_K562_ENCSR012UFW_profile_pattern_14.n_31-vs-ZBTB5-201.alignment profile-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR786OQY_ChIP_ZBTB5_K562_ENCSR012UFW_profile_pattern_15.n_31-vs-ZBTB5-201.alignment profile-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR786OQY_ChIP_ZBTB5_K562_ENCSR012UFW_profile_pattern_16.n_22-vs-ZBTB5-201.alignment profile-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR786OQY_ChIP_ZBTB5_K562_ENCSR012UFW_profile_pattern_17.n_20-vs-ZBTB5-201.alignment profile-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR786OQY_ChIP_ZBTB5_K562_ENCSR012UFW_profile_pattern_1.n_714-vs-ZBTB5-201.alignment profile-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR786OQY_ChIP_ZBTB5_K562_ENCSR012UFW_profile_pattern_2.n_393-vs-ZBTB5-201.alignment profile-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR786OQY_ChIP_ZBTB5_K562_ENCSR012UFW_profile_pattern_3.n_270-vs-ZBTB5-201.alignment profile-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR786OQY_ChIP_ZBTB5_K562_ENCSR012UFW_profile_pattern_4.n_263-vs-ZBTB5-201.alignment profile-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR786OQY_ChIP_ZBTB5_K562_ENCSR012UFW_profile_pattern_5.n_180-vs-ZBTB5-201.alignment profile-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR786OQY_ChIP_ZBTB5_K562_ENCSR012UFW_profile_pattern_6.n_138-vs-ZBTB5-201.alignment profile-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR786OQY_ChIP_ZBTB5_K562_ENCSR012UFW_profile_pattern_7.n_137-vs-ZBTB5-201.alignment profile-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR786OQY_ChIP_ZBTB5_K562_ENCSR012UFW_profile_pattern_8.n_136-vs-ZBTB5-201.alignment profile-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB5-201/pos_patterns.ENCSR786OQY_ChIP_ZBTB5_K562_ENCSR012UFW_profile_pattern_9.n_134-vs-ZBTB5-201.alignment profile-znf_b1h_alignment/ZBTB5-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB6-201/neg_patterns.ENCSR619OUC_ChIP_ZBTB6_HEK293_ENCSR309MGH_profile_pattern_0.n_447-vs-ZBTB6-201.alignment profile-znf_b1h_alignment/ZBTB6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB6-201/neg_patterns.ENCSR619OUC_ChIP_ZBTB6_HEK293_ENCSR309MGH_profile_pattern_1.n_264-vs-ZBTB6-201.alignment profile-znf_b1h_alignment/ZBTB6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB6-201/neg_patterns.ENCSR619OUC_ChIP_ZBTB6_HEK293_ENCSR309MGH_profile_pattern_2.n_232-vs-ZBTB6-201.alignment profile-znf_b1h_alignment/ZBTB6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB6-201/neg_patterns.ENCSR619OUC_ChIP_ZBTB6_HEK293_ENCSR309MGH_profile_pattern_3.n_185-vs-ZBTB6-201.alignment profile-znf_b1h_alignment/ZBTB6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB6-201/neg_patterns.ENCSR619OUC_ChIP_ZBTB6_HEK293_ENCSR309MGH_profile_pattern_4.n_168-vs-ZBTB6-201.alignment profile-znf_b1h_alignment/ZBTB6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB6-201/neg_patterns.ENCSR619OUC_ChIP_ZBTB6_HEK293_ENCSR309MGH_profile_pattern_5.n_158-vs-ZBTB6-201.alignment profile-znf_b1h_alignment/ZBTB6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB6-201/neg_patterns.ENCSR619OUC_ChIP_ZBTB6_HEK293_ENCSR309MGH_profile_pattern_6.n_153-vs-ZBTB6-201.alignment profile-znf_b1h_alignment/ZBTB6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB6-201/neg_patterns.ENCSR619OUC_ChIP_ZBTB6_HEK293_ENCSR309MGH_profile_pattern_7.n_133-vs-ZBTB6-201.alignment profile-znf_b1h_alignment/ZBTB6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB6-201/neg_patterns.ENCSR619OUC_ChIP_ZBTB6_HEK293_ENCSR309MGH_profile_pattern_8.n_96-vs-ZBTB6-201.alignment profile-znf_b1h_alignment/ZBTB6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB6-201/neg_patterns.ENCSR619OUC_ChIP_ZBTB6_HEK293_ENCSR309MGH_profile_pattern_9.n_34-vs-ZBTB6-201.alignment profile-znf_b1h_alignment/ZBTB6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB6-201/pos_patterns.ENCSR619OUC_ChIP_ZBTB6_HEK293_ENCSR309MGH_profile_pattern_0.n_14420-vs-ZBTB6-201.alignment profile-znf_b1h_alignment/ZBTB6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB6-201/pos_patterns.ENCSR619OUC_ChIP_ZBTB6_HEK293_ENCSR309MGH_profile_pattern_10.n_63-vs-ZBTB6-201.alignment profile-znf_b1h_alignment/ZBTB6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB6-201/pos_patterns.ENCSR619OUC_ChIP_ZBTB6_HEK293_ENCSR309MGH_profile_pattern_11.n_53-vs-ZBTB6-201.alignment profile-znf_b1h_alignment/ZBTB6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB6-201/pos_patterns.ENCSR619OUC_ChIP_ZBTB6_HEK293_ENCSR309MGH_profile_pattern_12.n_37-vs-ZBTB6-201.alignment profile-znf_b1h_alignment/ZBTB6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB6-201/pos_patterns.ENCSR619OUC_ChIP_ZBTB6_HEK293_ENCSR309MGH_profile_pattern_13.n_27-vs-ZBTB6-201.alignment profile-znf_b1h_alignment/ZBTB6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB6-201/pos_patterns.ENCSR619OUC_ChIP_ZBTB6_HEK293_ENCSR309MGH_profile_pattern_1.n_399-vs-ZBTB6-201.alignment profile-znf_b1h_alignment/ZBTB6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB6-201/pos_patterns.ENCSR619OUC_ChIP_ZBTB6_HEK293_ENCSR309MGH_profile_pattern_2.n_320-vs-ZBTB6-201.alignment profile-znf_b1h_alignment/ZBTB6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB6-201/pos_patterns.ENCSR619OUC_ChIP_ZBTB6_HEK293_ENCSR309MGH_profile_pattern_3.n_283-vs-ZBTB6-201.alignment profile-znf_b1h_alignment/ZBTB6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB6-201/pos_patterns.ENCSR619OUC_ChIP_ZBTB6_HEK293_ENCSR309MGH_profile_pattern_4.n_194-vs-ZBTB6-201.alignment profile-znf_b1h_alignment/ZBTB6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB6-201/pos_patterns.ENCSR619OUC_ChIP_ZBTB6_HEK293_ENCSR309MGH_profile_pattern_5.n_181-vs-ZBTB6-201.alignment profile-znf_b1h_alignment/ZBTB6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB6-201/pos_patterns.ENCSR619OUC_ChIP_ZBTB6_HEK293_ENCSR309MGH_profile_pattern_6.n_174-vs-ZBTB6-201.alignment profile-znf_b1h_alignment/ZBTB6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB6-201/pos_patterns.ENCSR619OUC_ChIP_ZBTB6_HEK293_ENCSR309MGH_profile_pattern_7.n_149-vs-ZBTB6-201.alignment profile-znf_b1h_alignment/ZBTB6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB6-201/pos_patterns.ENCSR619OUC_ChIP_ZBTB6_HEK293_ENCSR309MGH_profile_pattern_8.n_137-vs-ZBTB6-201.alignment profile-znf_b1h_alignment/ZBTB6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB6-201/pos_patterns.ENCSR619OUC_ChIP_ZBTB6_HEK293_ENCSR309MGH_profile_pattern_9.n_66-vs-ZBTB6-201.alignment profile-znf_b1h_alignment/ZBTB6-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB7B-201/neg_patterns.ENCSR277BXW_ChIP_ZBTB7B_MCF-7_ENCSR025PEB_profile_pattern_0.n_90-vs-ZBTB7B-201.alignment profile-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB7B-201/neg_patterns.ENCSR277BXW_ChIP_ZBTB7B_MCF-7_ENCSR025PEB_profile_pattern_10.n_38-vs-ZBTB7B-201.alignment profile-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB7B-201/neg_patterns.ENCSR277BXW_ChIP_ZBTB7B_MCF-7_ENCSR025PEB_profile_pattern_11.n_36-vs-ZBTB7B-201.alignment profile-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB7B-201/neg_patterns.ENCSR277BXW_ChIP_ZBTB7B_MCF-7_ENCSR025PEB_profile_pattern_12.n_26-vs-ZBTB7B-201.alignment profile-znf_b1h_alignment/ZBTB7B-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB7B-201/neg_patterns.ENCSR322ULL_ChIP_ZBTB7B_HepG2_ENCSR360FAJ_profile_pattern_0.n_67-vs-ZBTB7B-201.alignment profile-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB7B-201/neg_patterns.ENCSR322ULL_ChIP_ZBTB7B_HepG2_ENCSR360FAJ_profile_pattern_10.n_23-vs-ZBTB7B-201.alignment profile-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB7B-201/neg_patterns.ENCSR322ULL_ChIP_ZBTB7B_HepG2_ENCSR360FAJ_profile_pattern_11.n_22-vs-ZBTB7B-201.alignment profile-znf_b1h_alignment/ZBTB7B-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB7B-201/neg_patterns.ENCSR322ULL_ChIP_ZBTB7B_HepG2_ENCSR360FAJ_profile_pattern_13.n_21-vs-ZBTB7B-201.alignment profile-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB7B-201/neg_patterns.ENCSR322ULL_ChIP_ZBTB7B_HepG2_ENCSR360FAJ_profile_pattern_1.n_61-vs-ZBTB7B-201.alignment profile-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB7B-201/neg_patterns.ENCSR322ULL_ChIP_ZBTB7B_HepG2_ENCSR360FAJ_profile_pattern_2.n_58-vs-ZBTB7B-201.alignment profile-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB7B-201/neg_patterns.ENCSR322ULL_ChIP_ZBTB7B_HepG2_ENCSR360FAJ_profile_pattern_3.n_50-vs-ZBTB7B-201.alignment profile-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB7B-201/neg_patterns.ENCSR322ULL_ChIP_ZBTB7B_HepG2_ENCSR360FAJ_profile_pattern_4.n_49-vs-ZBTB7B-201.alignment profile-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB7B-201/neg_patterns.ENCSR322ULL_ChIP_ZBTB7B_HepG2_ENCSR360FAJ_profile_pattern_5.n_47-vs-ZBTB7B-201.alignment profile-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB7B-201/neg_patterns.ENCSR322ULL_ChIP_ZBTB7B_HepG2_ENCSR360FAJ_profile_pattern_6.n_43-vs-ZBTB7B-201.alignment profile-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB7B-201/neg_patterns.ENCSR322ULL_ChIP_ZBTB7B_HepG2_ENCSR360FAJ_profile_pattern_7.n_38-vs-ZBTB7B-201.alignment profile-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB7B-201/neg_patterns.ENCSR322ULL_ChIP_ZBTB7B_HepG2_ENCSR360FAJ_profile_pattern_8.n_31-vs-ZBTB7B-201.alignment profile-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB7B-201/neg_patterns.ENCSR322ULL_ChIP_ZBTB7B_HepG2_ENCSR360FAJ_profile_pattern_9.n_27-vs-ZBTB7B-201.alignment profile-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR277BXW_ChIP_ZBTB7B_MCF-7_ENCSR025PEB_profile_pattern_0.n_860-vs-ZBTB7B-201.alignment profile-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR277BXW_ChIP_ZBTB7B_MCF-7_ENCSR025PEB_profile_pattern_10.n_91-vs-ZBTB7B-201.alignment profile-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR277BXW_ChIP_ZBTB7B_MCF-7_ENCSR025PEB_profile_pattern_11.n_91-vs-ZBTB7B-201.alignment profile-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR277BXW_ChIP_ZBTB7B_MCF-7_ENCSR025PEB_profile_pattern_12.n_70-vs-ZBTB7B-201.alignment profile-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR277BXW_ChIP_ZBTB7B_MCF-7_ENCSR025PEB_profile_pattern_13.n_59-vs-ZBTB7B-201.alignment profile-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR277BXW_ChIP_ZBTB7B_MCF-7_ENCSR025PEB_profile_pattern_14.n_56-vs-ZBTB7B-201.alignment profile-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR277BXW_ChIP_ZBTB7B_MCF-7_ENCSR025PEB_profile_pattern_15.n_54-vs-ZBTB7B-201.alignment profile-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR277BXW_ChIP_ZBTB7B_MCF-7_ENCSR025PEB_profile_pattern_16.n_36-vs-ZBTB7B-201.alignment profile-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR277BXW_ChIP_ZBTB7B_MCF-7_ENCSR025PEB_profile_pattern_17.n_35-vs-ZBTB7B-201.alignment profile-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR277BXW_ChIP_ZBTB7B_MCF-7_ENCSR025PEB_profile_pattern_18.n_33-vs-ZBTB7B-201.alignment profile-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR277BXW_ChIP_ZBTB7B_MCF-7_ENCSR025PEB_profile_pattern_19.n_29-vs-ZBTB7B-201.alignment profile-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR277BXW_ChIP_ZBTB7B_MCF-7_ENCSR025PEB_profile_pattern_1.n_319-vs-ZBTB7B-201.alignment profile-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR277BXW_ChIP_ZBTB7B_MCF-7_ENCSR025PEB_profile_pattern_20.n_27-vs-ZBTB7B-201.alignment profile-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR277BXW_ChIP_ZBTB7B_MCF-7_ENCSR025PEB_profile_pattern_21.n_24-vs-ZBTB7B-201.alignment profile-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR277BXW_ChIP_ZBTB7B_MCF-7_ENCSR025PEB_profile_pattern_22.n_22-vs-ZBTB7B-201.alignment profile-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR277BXW_ChIP_ZBTB7B_MCF-7_ENCSR025PEB_profile_pattern_23.n_20-vs-ZBTB7B-201.alignment profile-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR277BXW_ChIP_ZBTB7B_MCF-7_ENCSR025PEB_profile_pattern_24.n_20-vs-ZBTB7B-201.alignment profile-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR277BXW_ChIP_ZBTB7B_MCF-7_ENCSR025PEB_profile_pattern_2.n_223-vs-ZBTB7B-201.alignment profile-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR277BXW_ChIP_ZBTB7B_MCF-7_ENCSR025PEB_profile_pattern_3.n_200-vs-ZBTB7B-201.alignment profile-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR277BXW_ChIP_ZBTB7B_MCF-7_ENCSR025PEB_profile_pattern_4.n_172-vs-ZBTB7B-201.alignment profile-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR277BXW_ChIP_ZBTB7B_MCF-7_ENCSR025PEB_profile_pattern_5.n_129-vs-ZBTB7B-201.alignment profile-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR277BXW_ChIP_ZBTB7B_MCF-7_ENCSR025PEB_profile_pattern_6.n_126-vs-ZBTB7B-201.alignment profile-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR277BXW_ChIP_ZBTB7B_MCF-7_ENCSR025PEB_profile_pattern_7.n_126-vs-ZBTB7B-201.alignment profile-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR277BXW_ChIP_ZBTB7B_MCF-7_ENCSR025PEB_profile_pattern_8.n_120-vs-ZBTB7B-201.alignment profile-znf_b1h_alignment/ZBTB7B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR277BXW_ChIP_ZBTB7B_MCF-7_ENCSR025PEB_profile_pattern_9.n_102-vs-ZBTB7B-201.alignment profile-znf_b1h_alignment/ZBTB7B-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB7B-201/pos_patterns.ENCSR322ULL_ChIP_ZBTB7B_HepG2_ENCSR360FAJ_profile_pattern_10.n_240-vs-ZBTB7B-201.alignment profile-znf_b1h_alignment/ZBTB7B-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZBTB8A-201/pos_patterns.ENCSR481FEC_ChIP_ZBTB8A_HEK293_ENCSR761KMA_profile_pattern_9.n_286-vs-ZBTB8A-201.alignment profile-znf_b1h_alignment/ZBTB8A-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFAT-213/pos_patterns.ENCSR409DYM_ChIP_ZFAT_HepG2_ENCSR616OXL_profile_pattern_5.n_25-vs-ZFAT-213.alignment profile-znf_b1h_alignment/ZFAT-213/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFAT-215/pos_patterns.ENCSR409DYM_ChIP_ZFAT_HepG2_ENCSR616OXL_profile_pattern_0.n_460-vs-ZFAT-215.alignment profile-znf_b1h_alignment/ZFAT-215/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFAT-215/pos_patterns.ENCSR409DYM_ChIP_ZFAT_HepG2_ENCSR616OXL_profile_pattern_1.n_148-vs-ZFAT-215.alignment profile-znf_b1h_alignment/ZFAT-215/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFAT-215/pos_patterns.ENCSR409DYM_ChIP_ZFAT_HepG2_ENCSR616OXL_profile_pattern_2.n_48-vs-ZFAT-215.alignment profile-znf_b1h_alignment/ZFAT-215/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFAT-215/pos_patterns.ENCSR409DYM_ChIP_ZFAT_HepG2_ENCSR616OXL_profile_pattern_3.n_41-vs-ZFAT-215.alignment profile-znf_b1h_alignment/ZFAT-215/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFAT-215/pos_patterns.ENCSR409DYM_ChIP_ZFAT_HepG2_ENCSR616OXL_profile_pattern_4.n_30-vs-ZFAT-215.alignment profile-znf_b1h_alignment/ZFAT-215/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFAT-215/pos_patterns.ENCSR409DYM_ChIP_ZFAT_HepG2_ENCSR616OXL_profile_pattern_6.n_23-vs-ZFAT-215.alignment profile-znf_b1h_alignment/ZFAT-215/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFAT-216/pos_patterns.ENCSR409DYM_ChIP_ZFAT_HepG2_ENCSR616OXL_profile_pattern_0.n_460-vs-ZFAT-216.alignment profile-znf_b1h_alignment/ZFAT-216/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFHX2-202/pos_patterns.ENCSR632SIM_ChIP_ZFHX2_HEK293_ENCSR547QPI_profile_pattern_7.n_341-vs-ZFHX2-202.alignment profile-znf_b1h_alignment/ZFHX2-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFHX2-202/pos_patterns.ENCSR632SIM_ChIP_ZFHX2_HEK293_ENCSR547QPI_profile_pattern_8.n_198-vs-ZFHX2-202.alignment profile-znf_b1h_alignment/ZFHX2-202/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFHX3-201/pos_patterns.ENCSR879RGN_ChIP_ZFHX3_HepG2_ENCSR339CDB_profile_pattern_10.n_73-vs-ZFHX3-201.alignment profile-znf_b1h_alignment/ZFHX3-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFHX3-201/pos_patterns.ENCSR879RGN_ChIP_ZFHX3_HepG2_ENCSR339CDB_profile_pattern_14.n_58-vs-ZFHX3-201.alignment profile-znf_b1h_alignment/ZFHX3-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFHX3-201/pos_patterns.ENCSR879RGN_ChIP_ZFHX3_HepG2_ENCSR339CDB_profile_pattern_18.n_24-vs-ZFHX3-201.alignment profile-znf_b1h_alignment/ZFHX3-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFHX3-201/pos_patterns.ENCSR879RGN_ChIP_ZFHX3_HepG2_ENCSR339CDB_profile_pattern_7.n_340-vs-ZFHX3-201.alignment profile-znf_b1h_alignment/ZFHX3-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP1-201/neg_patterns.ENCSR586DEH_ChIP_ZFP1_HepG2_ENCSR556WFV_profile_pattern_7.n_56-vs-ZFP1-201.alignment profile-znf_b1h_alignment/ZFP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP1-201/neg_patterns.ENCSR586DEH_ChIP_ZFP1_HepG2_ENCSR556WFV_profile_pattern_8.n_43-vs-ZFP1-201.alignment profile-znf_b1h_alignment/ZFP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP1-201/neg_patterns.ENCSR586DEH_ChIP_ZFP1_HepG2_ENCSR556WFV_profile_pattern_9.n_43-vs-ZFP1-201.alignment profile-znf_b1h_alignment/ZFP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP1-201/neg_patterns.ENCSR617POJ_ChIP_ZFP1_K562_ENCSR848ZRL_profile_pattern_0.n_562-vs-ZFP1-201.alignment profile-znf_b1h_alignment/ZFP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP1-201/neg_patterns.ENCSR617POJ_ChIP_ZFP1_K562_ENCSR848ZRL_profile_pattern_10.n_48-vs-ZFP1-201.alignment profile-znf_b1h_alignment/ZFP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP1-201/neg_patterns.ENCSR617POJ_ChIP_ZFP1_K562_ENCSR848ZRL_profile_pattern_11.n_45-vs-ZFP1-201.alignment profile-znf_b1h_alignment/ZFP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP1-201/neg_patterns.ENCSR617POJ_ChIP_ZFP1_K562_ENCSR848ZRL_profile_pattern_12.n_38-vs-ZFP1-201.alignment profile-znf_b1h_alignment/ZFP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP1-201/neg_patterns.ENCSR617POJ_ChIP_ZFP1_K562_ENCSR848ZRL_profile_pattern_13.n_34-vs-ZFP1-201.alignment profile-znf_b1h_alignment/ZFP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP1-201/neg_patterns.ENCSR617POJ_ChIP_ZFP1_K562_ENCSR848ZRL_profile_pattern_14.n_30-vs-ZFP1-201.alignment profile-znf_b1h_alignment/ZFP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP1-201/neg_patterns.ENCSR617POJ_ChIP_ZFP1_K562_ENCSR848ZRL_profile_pattern_15.n_30-vs-ZFP1-201.alignment profile-znf_b1h_alignment/ZFP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP1-201/neg_patterns.ENCSR617POJ_ChIP_ZFP1_K562_ENCSR848ZRL_profile_pattern_16.n_30-vs-ZFP1-201.alignment profile-znf_b1h_alignment/ZFP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP1-201/neg_patterns.ENCSR617POJ_ChIP_ZFP1_K562_ENCSR848ZRL_profile_pattern_17.n_29-vs-ZFP1-201.alignment profile-znf_b1h_alignment/ZFP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP1-201/neg_patterns.ENCSR617POJ_ChIP_ZFP1_K562_ENCSR848ZRL_profile_pattern_18.n_27-vs-ZFP1-201.alignment profile-znf_b1h_alignment/ZFP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP1-201/neg_patterns.ENCSR617POJ_ChIP_ZFP1_K562_ENCSR848ZRL_profile_pattern_1.n_178-vs-ZFP1-201.alignment profile-znf_b1h_alignment/ZFP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP1-201/neg_patterns.ENCSR617POJ_ChIP_ZFP1_K562_ENCSR848ZRL_profile_pattern_2.n_119-vs-ZFP1-201.alignment profile-znf_b1h_alignment/ZFP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP1-201/neg_patterns.ENCSR617POJ_ChIP_ZFP1_K562_ENCSR848ZRL_profile_pattern_3.n_112-vs-ZFP1-201.alignment profile-znf_b1h_alignment/ZFP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP1-201/neg_patterns.ENCSR617POJ_ChIP_ZFP1_K562_ENCSR848ZRL_profile_pattern_4.n_89-vs-ZFP1-201.alignment profile-znf_b1h_alignment/ZFP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP1-201/neg_patterns.ENCSR617POJ_ChIP_ZFP1_K562_ENCSR848ZRL_profile_pattern_5.n_86-vs-ZFP1-201.alignment profile-znf_b1h_alignment/ZFP1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP1-201/neg_patterns.ENCSR617POJ_ChIP_ZFP1_K562_ENCSR848ZRL_profile_pattern_6.n_82-vs-ZFP1-201.alignment profile-znf_b1h_alignment/ZFP1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP1-201/neg_patterns.ENCSR617POJ_ChIP_ZFP1_K562_ENCSR848ZRL_profile_pattern_8.n_77-vs-ZFP1-201.alignment profile-znf_b1h_alignment/ZFP1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP14-201/pos_patterns.ENCSR620DBD_ChIP_ZFP14_HepG2_ENCSR171EIQ_profile_pattern_12.n_46-vs-ZFP14-201.alignment profile-znf_b1h_alignment/ZFP14-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP14-201/pos_patterns.ENCSR620DBD_ChIP_ZFP14_HepG2_ENCSR171EIQ_profile_pattern_13.n_42-vs-ZFP14-201.alignment profile-znf_b1h_alignment/ZFP14-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP14-201/pos_patterns.ENCSR620DBD_ChIP_ZFP14_HepG2_ENCSR171EIQ_profile_pattern_14.n_41-vs-ZFP14-201.alignment profile-znf_b1h_alignment/ZFP14-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP14-201/pos_patterns.ENCSR620DBD_ChIP_ZFP14_HepG2_ENCSR171EIQ_profile_pattern_15.n_40-vs-ZFP14-201.alignment profile-znf_b1h_alignment/ZFP14-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP14-201/pos_patterns.ENCSR620DBD_ChIP_ZFP14_HepG2_ENCSR171EIQ_profile_pattern_16.n_37-vs-ZFP14-201.alignment profile-znf_b1h_alignment/ZFP14-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP14-201/pos_patterns.ENCSR620DBD_ChIP_ZFP14_HepG2_ENCSR171EIQ_profile_pattern_17.n_37-vs-ZFP14-201.alignment profile-znf_b1h_alignment/ZFP14-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP14-201/pos_patterns.ENCSR620DBD_ChIP_ZFP14_HepG2_ENCSR171EIQ_profile_pattern_18.n_37-vs-ZFP14-201.alignment profile-znf_b1h_alignment/ZFP14-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP14-201/pos_patterns.ENCSR620DBD_ChIP_ZFP14_HepG2_ENCSR171EIQ_profile_pattern_19.n_34-vs-ZFP14-201.alignment profile-znf_b1h_alignment/ZFP14-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP14-201/pos_patterns.ENCSR620DBD_ChIP_ZFP14_HepG2_ENCSR171EIQ_profile_pattern_1.n_135-vs-ZFP14-201.alignment profile-znf_b1h_alignment/ZFP14-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP14-201/pos_patterns.ENCSR620DBD_ChIP_ZFP14_HepG2_ENCSR171EIQ_profile_pattern_20.n_32-vs-ZFP14-201.alignment profile-znf_b1h_alignment/ZFP14-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP14-201/pos_patterns.ENCSR620DBD_ChIP_ZFP14_HepG2_ENCSR171EIQ_profile_pattern_2.n_122-vs-ZFP14-201.alignment profile-znf_b1h_alignment/ZFP14-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP14-201/pos_patterns.ENCSR620DBD_ChIP_ZFP14_HepG2_ENCSR171EIQ_profile_pattern_3.n_122-vs-ZFP14-201.alignment profile-znf_b1h_alignment/ZFP14-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP14-201/pos_patterns.ENCSR620DBD_ChIP_ZFP14_HepG2_ENCSR171EIQ_profile_pattern_4.n_114-vs-ZFP14-201.alignment profile-znf_b1h_alignment/ZFP14-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP28-201/Hughes_GR_models_ZFP28_profile-pos.pattern_0.n_1595-vs-ZFP28-201.alignment profile-znf_b1h_alignment/ZFP28-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP28-201/Hughes_GR_models_ZFP28_profile-pos.pattern_1.n_992-vs-ZFP28-201.alignment profile-znf_b1h_alignment/ZFP28-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP28-201/Hughes_GR_models_ZFP28_profile-pos.pattern_2.n_968-vs-ZFP28-201.alignment profile-znf_b1h_alignment/ZFP28-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP30-201/pos_patterns.ENCSR376QPI_ChIP_ZFP30_SK-N-SH_ENCSR611GYZ_profile_pattern_11.n_92-vs-ZFP30-201.alignment profile-znf_b1h_alignment/ZFP30-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP30-201/pos_patterns.ENCSR376QPI_ChIP_ZFP30_SK-N-SH_ENCSR611GYZ_profile_pattern_13.n_54-vs-ZFP30-201.alignment profile-znf_b1h_alignment/ZFP30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP30-201/pos_patterns.ENCSR376QPI_ChIP_ZFP30_SK-N-SH_ENCSR611GYZ_profile_pattern_14.n_46-vs-ZFP30-201.alignment profile-znf_b1h_alignment/ZFP30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP30-201/pos_patterns.ENCSR376QPI_ChIP_ZFP30_SK-N-SH_ENCSR611GYZ_profile_pattern_15.n_40-vs-ZFP30-201.alignment profile-znf_b1h_alignment/ZFP30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP30-201/pos_patterns.ENCSR376QPI_ChIP_ZFP30_SK-N-SH_ENCSR611GYZ_profile_pattern_16.n_40-vs-ZFP30-201.alignment profile-znf_b1h_alignment/ZFP30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP30-201/pos_patterns.ENCSR376QPI_ChIP_ZFP30_SK-N-SH_ENCSR611GYZ_profile_pattern_1.n_902-vs-ZFP30-201.alignment profile-znf_b1h_alignment/ZFP30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP30-201/pos_patterns.ENCSR376QPI_ChIP_ZFP30_SK-N-SH_ENCSR611GYZ_profile_pattern_2.n_772-vs-ZFP30-201.alignment profile-znf_b1h_alignment/ZFP30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP30-201/pos_patterns.ENCSR376QPI_ChIP_ZFP30_SK-N-SH_ENCSR611GYZ_profile_pattern_3.n_402-vs-ZFP30-201.alignment profile-znf_b1h_alignment/ZFP30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP30-201/pos_patterns.ENCSR376QPI_ChIP_ZFP30_SK-N-SH_ENCSR611GYZ_profile_pattern_4.n_296-vs-ZFP30-201.alignment profile-znf_b1h_alignment/ZFP30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP30-201/pos_patterns.ENCSR376QPI_ChIP_ZFP30_SK-N-SH_ENCSR611GYZ_profile_pattern_5.n_284-vs-ZFP30-201.alignment profile-znf_b1h_alignment/ZFP30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP30-201/pos_patterns.ENCSR376QPI_ChIP_ZFP30_SK-N-SH_ENCSR611GYZ_profile_pattern_6.n_240-vs-ZFP30-201.alignment profile-znf_b1h_alignment/ZFP30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP30-201/pos_patterns.ENCSR376QPI_ChIP_ZFP30_SK-N-SH_ENCSR611GYZ_profile_pattern_7.n_195-vs-ZFP30-201.alignment profile-znf_b1h_alignment/ZFP30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP30-201/pos_patterns.ENCSR376QPI_ChIP_ZFP30_SK-N-SH_ENCSR611GYZ_profile_pattern_8.n_145-vs-ZFP30-201.alignment profile-znf_b1h_alignment/ZFP30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP30-201/pos_patterns.ENCSR376QPI_ChIP_ZFP30_SK-N-SH_ENCSR611GYZ_profile_pattern_9.n_121-vs-ZFP30-201.alignment profile-znf_b1h_alignment/ZFP30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP3-201/Hughes_NB_models_ZFP3_profile-pos.pattern_0.n_1077-vs-ZFP3-201.alignment profile-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP3-201/Hughes_NB_models_ZFP3_profile-pos.pattern_1.n_33-vs-ZFP3-201.alignment profile-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP3-201/neg_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_profile_pattern_0.n_828-vs-ZFP3-201.alignment profile-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP3-201/neg_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_profile_pattern_10.n_53-vs-ZFP3-201.alignment profile-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP3-201/neg_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_profile_pattern_11.n_29-vs-ZFP3-201.alignment profile-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP3-201/neg_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_profile_pattern_12.n_28-vs-ZFP3-201.alignment profile-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP3-201/neg_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_profile_pattern_13.n_24-vs-ZFP3-201.alignment profile-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP3-201/neg_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_profile_pattern_1.n_466-vs-ZFP3-201.alignment profile-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP3-201/neg_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_profile_pattern_2.n_210-vs-ZFP3-201.alignment profile-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP3-201/neg_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_profile_pattern_3.n_156-vs-ZFP3-201.alignment profile-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP3-201/neg_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_profile_pattern_4.n_154-vs-ZFP3-201.alignment profile-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP3-201/neg_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_profile_pattern_5.n_107-vs-ZFP3-201.alignment profile-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP3-201/neg_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_profile_pattern_6.n_95-vs-ZFP3-201.alignment profile-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP3-201/neg_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_profile_pattern_7.n_92-vs-ZFP3-201.alignment profile-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP3-201/neg_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_profile_pattern_8.n_84-vs-ZFP3-201.alignment profile-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP3-201/neg_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_profile_pattern_9.n_78-vs-ZFP3-201.alignment profile-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR134QIE_ChIP_ZFP3_HEK293_ENCSR097ZPZ_profile_pattern_0.n_2453-vs-ZFP3-201.alignment profile-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR134QIE_ChIP_ZFP3_HEK293_ENCSR097ZPZ_profile_pattern_1.n_366-vs-ZFP3-201.alignment profile-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR134QIE_ChIP_ZFP3_HEK293_ENCSR097ZPZ_profile_pattern_2.n_355-vs-ZFP3-201.alignment profile-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR134QIE_ChIP_ZFP3_HEK293_ENCSR097ZPZ_profile_pattern_3.n_297-vs-ZFP3-201.alignment profile-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR134QIE_ChIP_ZFP3_HEK293_ENCSR097ZPZ_profile_pattern_4.n_88-vs-ZFP3-201.alignment profile-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR134QIE_ChIP_ZFP3_HEK293_ENCSR097ZPZ_profile_pattern_5.n_59-vs-ZFP3-201.alignment profile-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR134QIE_ChIP_ZFP3_HEK293_ENCSR097ZPZ_profile_pattern_6.n_35-vs-ZFP3-201.alignment profile-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR134QIE_ChIP_ZFP3_HEK293_ENCSR097ZPZ_profile_pattern_7.n_20-vs-ZFP3-201.alignment profile-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_profile_pattern_0.n_4239-vs-ZFP3-201.alignment profile-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_profile_pattern_10.n_218-vs-ZFP3-201.alignment profile-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_profile_pattern_11.n_203-vs-ZFP3-201.alignment profile-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_profile_pattern_12.n_175-vs-ZFP3-201.alignment profile-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_profile_pattern_13.n_153-vs-ZFP3-201.alignment profile-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_profile_pattern_14.n_152-vs-ZFP3-201.alignment profile-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_profile_pattern_15.n_114-vs-ZFP3-201.alignment profile-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_profile_pattern_16.n_51-vs-ZFP3-201.alignment profile-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_profile_pattern_17.n_34-vs-ZFP3-201.alignment profile-znf_b1h_alignment/ZFP3-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_profile_pattern_19.n_24-vs-ZFP3-201.alignment profile-znf_b1h_alignment/ZFP3-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_profile_pattern_20.n_24-vs-ZFP3-201.alignment profile-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_profile_pattern_21.n_20-vs-ZFP3-201.alignment profile-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_profile_pattern_2.n_1197-vs-ZFP3-201.alignment profile-znf_b1h_alignment/ZFP3-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_profile_pattern_4.n_544-vs-ZFP3-201.alignment profile-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_profile_pattern_5.n_520-vs-ZFP3-201.alignment profile-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_profile_pattern_6.n_474-vs-ZFP3-201.alignment profile-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_profile_pattern_7.n_276-vs-ZFP3-201.alignment profile-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_profile_pattern_8.n_242-vs-ZFP3-201.alignment profile-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP3-201/pos_patterns.ENCSR581GUY_ChIP_ZFP3_SK-N-SH_ENCSR333QKK_profile_pattern_9.n_233-vs-ZFP3-201.alignment profile-znf_b1h_alignment/ZFP3-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP37-201/neg_patterns.ENCSR365GRX_ChIP_ZFP37_HEK293_ENCSR068EXE_profile_pattern_0.n_49-vs-ZFP37-201.alignment profile-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP37-201/neg_patterns.ENCSR365GRX_ChIP_ZFP37_HEK293_ENCSR068EXE_profile_pattern_1.n_43-vs-ZFP37-201.alignment profile-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP37-201/neg_patterns.ENCSR365GRX_ChIP_ZFP37_HEK293_ENCSR068EXE_profile_pattern_2.n_27-vs-ZFP37-201.alignment profile-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP37-201/neg_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_profile_pattern_0.n_38-vs-ZFP37-201.alignment profile-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR365GRX_ChIP_ZFP37_HEK293_ENCSR068EXE_profile_pattern_0.n_1470-vs-ZFP37-201.alignment profile-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR365GRX_ChIP_ZFP37_HEK293_ENCSR068EXE_profile_pattern_10.n_38-vs-ZFP37-201.alignment profile-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR365GRX_ChIP_ZFP37_HEK293_ENCSR068EXE_profile_pattern_1.n_1318-vs-ZFP37-201.alignment profile-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR365GRX_ChIP_ZFP37_HEK293_ENCSR068EXE_profile_pattern_2.n_1131-vs-ZFP37-201.alignment profile-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR365GRX_ChIP_ZFP37_HEK293_ENCSR068EXE_profile_pattern_3.n_674-vs-ZFP37-201.alignment profile-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR365GRX_ChIP_ZFP37_HEK293_ENCSR068EXE_profile_pattern_4.n_489-vs-ZFP37-201.alignment profile-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR365GRX_ChIP_ZFP37_HEK293_ENCSR068EXE_profile_pattern_5.n_447-vs-ZFP37-201.alignment profile-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR365GRX_ChIP_ZFP37_HEK293_ENCSR068EXE_profile_pattern_6.n_182-vs-ZFP37-201.alignment profile-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR365GRX_ChIP_ZFP37_HEK293_ENCSR068EXE_profile_pattern_7.n_151-vs-ZFP37-201.alignment profile-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR365GRX_ChIP_ZFP37_HEK293_ENCSR068EXE_profile_pattern_8.n_116-vs-ZFP37-201.alignment profile-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR365GRX_ChIP_ZFP37_HEK293_ENCSR068EXE_profile_pattern_9.n_85-vs-ZFP37-201.alignment profile-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_profile_pattern_0.n_1197-vs-ZFP37-201.alignment profile-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_profile_pattern_10.n_200-vs-ZFP37-201.alignment profile-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_profile_pattern_11.n_141-vs-ZFP37-201.alignment profile-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_profile_pattern_12.n_135-vs-ZFP37-201.alignment profile-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_profile_pattern_13.n_129-vs-ZFP37-201.alignment profile-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_profile_pattern_14.n_126-vs-ZFP37-201.alignment profile-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_profile_pattern_15.n_118-vs-ZFP37-201.alignment profile-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_profile_pattern_16.n_100-vs-ZFP37-201.alignment profile-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_profile_pattern_17.n_95-vs-ZFP37-201.alignment profile-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_profile_pattern_1.n_663-vs-ZFP37-201.alignment profile-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_profile_pattern_2.n_407-vs-ZFP37-201.alignment profile-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_profile_pattern_3.n_318-vs-ZFP37-201.alignment profile-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_profile_pattern_4.n_311-vs-ZFP37-201.alignment profile-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_profile_pattern_5.n_275-vs-ZFP37-201.alignment profile-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_profile_pattern_6.n_260-vs-ZFP37-201.alignment profile-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_profile_pattern_7.n_245-vs-ZFP37-201.alignment profile-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_profile_pattern_8.n_239-vs-ZFP37-201.alignment profile-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP37-201/pos_patterns.ENCSR505LJT_ChIP_ZFP37_HepG2_ENCSR082UGR_profile_pattern_9.n_233-vs-ZFP37-201.alignment profile-znf_b1h_alignment/ZFP37-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP41-201/neg_patterns.ENCSR348ONY_ChIP_ZFP41_HEK293_ENCSR192ZFC_profile_pattern_0.n_46-vs-ZFP41-201.alignment profile-znf_b1h_alignment/ZFP41-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP41-201/neg_patterns.ENCSR348ONY_ChIP_ZFP41_HEK293_ENCSR192ZFC_profile_pattern_1.n_30-vs-ZFP41-201.alignment profile-znf_b1h_alignment/ZFP41-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP41-201/neg_patterns.ENCSR731UPJ_ChIP_ZFP41_HepG2_ENCSR399MFQ_profile_pattern_0.n_28-vs-ZFP41-201.alignment profile-znf_b1h_alignment/ZFP41-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP41-201/neg_patterns.ENCSR731UPJ_ChIP_ZFP41_HepG2_ENCSR399MFQ_profile_pattern_1.n_27-vs-ZFP41-201.alignment profile-znf_b1h_alignment/ZFP41-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP41-201/neg_patterns.ENCSR731UPJ_ChIP_ZFP41_HepG2_ENCSR399MFQ_profile_pattern_2.n_26-vs-ZFP41-201.alignment profile-znf_b1h_alignment/ZFP41-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP41-201/neg_patterns.ENCSR731UPJ_ChIP_ZFP41_HepG2_ENCSR399MFQ_profile_pattern_3.n_22-vs-ZFP41-201.alignment profile-znf_b1h_alignment/ZFP41-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP64-201/Hughes_GR_models_ZFP64_profile-pos.pattern_9.n_92-vs-ZFP64-201.alignment profile-znf_b1h_alignment/ZFP64-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP64-205/pos_patterns.ENCSR487CPI_ChIP_ZFP64_HepG2_ENCSR232ABE_profile_pattern_3.n_187-vs-ZFP64-205.alignment profile-znf_b1h_alignment/ZFP64-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP64-205/pos_patterns.ENCSR487CPI_ChIP_ZFP64_HepG2_ENCSR232ABE_profile_pattern_4.n_175-vs-ZFP64-205.alignment profile-znf_b1h_alignment/ZFP64-205/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP69-201/ChipExo_models_ZFP69_profile-pos.pattern_5.n_26-vs-ZFP69-201.alignment profile-znf_b1h_alignment/ZFP69-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP69B-201/ChipExo_models_ZFP69B_profile-pos.pattern_1.n_252-vs-ZFP69B-201.alignment profile-znf_b1h_alignment/ZFP69B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP69B-201/ChipExo_models_ZFP69B_profile-pos.pattern_2.n_224-vs-ZFP69B-201.alignment profile-znf_b1h_alignment/ZFP69B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP69B-201/ChipExo_models_ZFP69B_profile-pos.pattern_3.n_160-vs-ZFP69B-201.alignment profile-znf_b1h_alignment/ZFP69B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP69B-201/ChipExo_models_ZFP69B_profile-pos.pattern_4.n_71-vs-ZFP69B-201.alignment profile-znf_b1h_alignment/ZFP69B-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP69B-201/ChipExo_models_ZFP69B_profile-pos.pattern_6.n_26-vs-ZFP69B-201.alignment profile-znf_b1h_alignment/ZFP69B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP69B-201/ChipExo_models_ZFP69B_profile-pos.pattern_7.n_24-vs-ZFP69B-201.alignment profile-znf_b1h_alignment/ZFP69B-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP69B-201/neg_patterns.ENCSR381VYR_ChIP_ZFP69B_HEK293_ENCSR105YBR_profile_pattern_1.n_49-vs-ZFP69B-201.alignment profile-znf_b1h_alignment/ZFP69B-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP69B-201/pos_patterns.ENCSR381VYR_ChIP_ZFP69B_HEK293_ENCSR105YBR_profile_pattern_0.n_6449-vs-ZFP69B-201.alignment profile-znf_b1h_alignment/ZFP69B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP69B-201/pos_patterns.ENCSR381VYR_ChIP_ZFP69B_HEK293_ENCSR105YBR_profile_pattern_10.n_144-vs-ZFP69B-201.alignment profile-znf_b1h_alignment/ZFP69B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP69B-201/pos_patterns.ENCSR381VYR_ChIP_ZFP69B_HEK293_ENCSR105YBR_profile_pattern_11.n_144-vs-ZFP69B-201.alignment profile-znf_b1h_alignment/ZFP69B-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP69B-201/pos_patterns.ENCSR381VYR_ChIP_ZFP69B_HEK293_ENCSR105YBR_profile_pattern_13.n_36-vs-ZFP69B-201.alignment profile-znf_b1h_alignment/ZFP69B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP69B-201/pos_patterns.ENCSR381VYR_ChIP_ZFP69B_HEK293_ENCSR105YBR_profile_pattern_14.n_21-vs-ZFP69B-201.alignment profile-znf_b1h_alignment/ZFP69B-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP69B-201/pos_patterns.ENCSR381VYR_ChIP_ZFP69B_HEK293_ENCSR105YBR_profile_pattern_1.n_2146-vs-ZFP69B-201.alignment profile-znf_b1h_alignment/ZFP69B-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP82-201/pos_patterns.ENCSR196FSX_ChIP_ZFP82_HepG2_ENCSR535QVS_profile_pattern_1.n_986-vs-ZFP82-201.alignment profile-znf_b1h_alignment/ZFP82-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP82-201/pos_patterns.ENCSR196FSX_ChIP_ZFP82_HepG2_ENCSR535QVS_profile_pattern_21.n_42-vs-ZFP82-201.alignment profile-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP82-201/pos_patterns.ENCSR196FSX_ChIP_ZFP82_HepG2_ENCSR535QVS_profile_pattern_22.n_40-vs-ZFP82-201.alignment profile-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP82-201/pos_patterns.ENCSR196FSX_ChIP_ZFP82_HepG2_ENCSR535QVS_profile_pattern_23.n_32-vs-ZFP82-201.alignment profile-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP82-201/pos_patterns.ENCSR196FSX_ChIP_ZFP82_HepG2_ENCSR535QVS_profile_pattern_24.n_21-vs-ZFP82-201.alignment profile-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP82-201/pos_patterns.ENCSR196FSX_ChIP_ZFP82_HepG2_ENCSR535QVS_profile_pattern_2.n_619-vs-ZFP82-201.alignment profile-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP82-201/pos_patterns.ENCSR196FSX_ChIP_ZFP82_HepG2_ENCSR535QVS_profile_pattern_3.n_607-vs-ZFP82-201.alignment profile-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP82-201/pos_patterns.ENCSR196FSX_ChIP_ZFP82_HepG2_ENCSR535QVS_profile_pattern_4.n_439-vs-ZFP82-201.alignment profile-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP82-201/pos_patterns.ENCSR196FSX_ChIP_ZFP82_HepG2_ENCSR535QVS_profile_pattern_5.n_423-vs-ZFP82-201.alignment profile-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP82-201/pos_patterns.ENCSR196FSX_ChIP_ZFP82_HepG2_ENCSR535QVS_profile_pattern_6.n_253-vs-ZFP82-201.alignment profile-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP82-201/pos_patterns.ENCSR196FSX_ChIP_ZFP82_HepG2_ENCSR535QVS_profile_pattern_7.n_232-vs-ZFP82-201.alignment profile-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP82-201/pos_patterns.ENCSR196FSX_ChIP_ZFP82_HepG2_ENCSR535QVS_profile_pattern_8.n_219-vs-ZFP82-201.alignment profile-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP82-201/pos_patterns.ENCSR196FSX_ChIP_ZFP82_HepG2_ENCSR535QVS_profile_pattern_9.n_181-vs-ZFP82-201.alignment profile-znf_b1h_alignment/ZFP82-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/ChipExo_models_ZFP90_profile-pos.pattern_0.n_192-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/ChipExo_models_ZFP90_profile-pos.pattern_1.n_144-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/ChipExo_models_ZFP90_profile-pos.pattern_2.n_111-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/ChipExo_models_ZFP90_profile-pos.pattern_3.n_58-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/ChipExo_models_ZFP90_profile-pos.pattern_4.n_44-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/ChipExo_models_ZFP90_profile-pos.pattern_5.n_23-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/neg_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_0.n_281-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/neg_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_10.n_40-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/neg_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_11.n_30-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/neg_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_12.n_25-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/neg_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_13.n_22-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/neg_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_14.n_20-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/neg_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_1.n_108-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/neg_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_2.n_98-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/neg_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_3.n_81-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/neg_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_4.n_65-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/neg_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_5.n_62-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/neg_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_6.n_57-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/neg_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_7.n_45-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/neg_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_8.n_43-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/neg_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_9.n_42-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_11.n_300-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_12.n_300-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_13.n_267-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_14.n_257-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_15.n_231-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_16.n_225-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_17.n_223-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_18.n_201-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_19.n_193-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_1.n_476-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_20.n_186-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_21.n_177-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_22.n_177-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_23.n_174-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_24.n_143-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_25.n_136-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_26.n_122-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_27.n_112-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_28.n_101-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_29.n_99-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_2.n_468-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_30.n_70-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_31.n_44-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_32.n_32-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_33.n_28-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_3.n_465-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_4.n_424-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_5.n_423-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_6.n_421-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_7.n_392-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_8.n_375-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-201/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_9.n_320-vs-ZFP90-201.alignment profile-znf_b1h_alignment/ZFP90-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-205/ChipExo_models_ZFP90_profile-pos.pattern_0.n_192-vs-ZFP90-205.alignment profile-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-205/ChipExo_models_ZFP90_profile-pos.pattern_1.n_144-vs-ZFP90-205.alignment profile-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-205/ChipExo_models_ZFP90_profile-pos.pattern_2.n_111-vs-ZFP90-205.alignment profile-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-205/ChipExo_models_ZFP90_profile-pos.pattern_3.n_58-vs-ZFP90-205.alignment profile-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-205/ChipExo_models_ZFP90_profile-pos.pattern_4.n_44-vs-ZFP90-205.alignment profile-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-205/ChipExo_models_ZFP90_profile-pos.pattern_5.n_23-vs-ZFP90-205.alignment profile-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-205/neg_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_0.n_281-vs-ZFP90-205.alignment profile-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-205/neg_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_10.n_40-vs-ZFP90-205.alignment profile-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-205/neg_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_11.n_30-vs-ZFP90-205.alignment profile-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-205/neg_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_12.n_25-vs-ZFP90-205.alignment profile-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-205/neg_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_13.n_22-vs-ZFP90-205.alignment profile-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-205/neg_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_14.n_20-vs-ZFP90-205.alignment profile-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-205/neg_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_1.n_108-vs-ZFP90-205.alignment profile-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-205/neg_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_2.n_98-vs-ZFP90-205.alignment profile-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-205/neg_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_3.n_81-vs-ZFP90-205.alignment profile-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-205/neg_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_4.n_65-vs-ZFP90-205.alignment profile-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-205/neg_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_5.n_62-vs-ZFP90-205.alignment profile-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-205/neg_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_6.n_57-vs-ZFP90-205.alignment profile-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-205/neg_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_7.n_45-vs-ZFP90-205.alignment profile-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-205/neg_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_8.n_43-vs-ZFP90-205.alignment profile-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-205/neg_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_9.n_42-vs-ZFP90-205.alignment profile-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-205/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_0.n_849-vs-ZFP90-205.alignment profile-znf_b1h_alignment/ZFP90-205/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-205/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_29.n_99-vs-ZFP90-205.alignment profile-znf_b1h_alignment/ZFP90-205/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-205/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_5.n_423-vs-ZFP90-205.alignment profile-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-205/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_6.n_421-vs-ZFP90-205.alignment profile-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-205/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_7.n_392-vs-ZFP90-205.alignment profile-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-205/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_8.n_375-vs-ZFP90-205.alignment profile-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP90-205/pos_patterns.ENCSR377GZS_ChIP_ZFP90_HepG2_ENCSR808AJA_profile_pattern_9.n_320-vs-ZFP90-205.alignment profile-znf_b1h_alignment/ZFP90-205/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP91-201/neg_patterns.ENCSR201DCF_ChIP_ZFP91_K562_ENCSR493AYF_profile_pattern_0.n_499-vs-ZFP91-201.alignment profile-znf_b1h_alignment/ZFP91-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP91-201/neg_patterns.ENCSR201DCF_ChIP_ZFP91_K562_ENCSR493AYF_profile_pattern_2.n_107-vs-ZFP91-201.alignment profile-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP91-201/neg_patterns.ENCSR201DCF_ChIP_ZFP91_K562_ENCSR493AYF_profile_pattern_3.n_99-vs-ZFP91-201.alignment profile-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP91-201/neg_patterns.ENCSR201DCF_ChIP_ZFP91_K562_ENCSR493AYF_profile_pattern_4.n_92-vs-ZFP91-201.alignment profile-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP91-201/neg_patterns.ENCSR201DCF_ChIP_ZFP91_K562_ENCSR493AYF_profile_pattern_5.n_70-vs-ZFP91-201.alignment profile-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP91-201/neg_patterns.ENCSR201DCF_ChIP_ZFP91_K562_ENCSR493AYF_profile_pattern_6.n_66-vs-ZFP91-201.alignment profile-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP91-201/neg_patterns.ENCSR201DCF_ChIP_ZFP91_K562_ENCSR493AYF_profile_pattern_7.n_58-vs-ZFP91-201.alignment profile-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP91-201/neg_patterns.ENCSR201DCF_ChIP_ZFP91_K562_ENCSR493AYF_profile_pattern_8.n_44-vs-ZFP91-201.alignment profile-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP91-201/neg_patterns.ENCSR678KUJ_ChIP_ZFP91_HepG2_ENCSR551SZJ_profile_pattern_0.n_211-vs-ZFP91-201.alignment profile-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP91-201/neg_patterns.ENCSR678KUJ_ChIP_ZFP91_HepG2_ENCSR551SZJ_profile_pattern_1.n_201-vs-ZFP91-201.alignment profile-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP91-201/neg_patterns.ENCSR678KUJ_ChIP_ZFP91_HepG2_ENCSR551SZJ_profile_pattern_2.n_184-vs-ZFP91-201.alignment profile-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP91-201/neg_patterns.ENCSR678KUJ_ChIP_ZFP91_HepG2_ENCSR551SZJ_profile_pattern_3.n_57-vs-ZFP91-201.alignment profile-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP91-201/neg_patterns.ENCSR678KUJ_ChIP_ZFP91_HepG2_ENCSR551SZJ_profile_pattern_4.n_52-vs-ZFP91-201.alignment profile-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP91-201/neg_patterns.ENCSR678KUJ_ChIP_ZFP91_HepG2_ENCSR551SZJ_profile_pattern_5.n_39-vs-ZFP91-201.alignment profile-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP91-201/neg_patterns.ENCSR678KUJ_ChIP_ZFP91_HepG2_ENCSR551SZJ_profile_pattern_6.n_28-vs-ZFP91-201.alignment profile-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP91-201/neg_patterns.ENCSR898XMH_ChIP_ZFP91_K562_ENCSR673ZFH_profile_pattern_0.n_698-vs-ZFP91-201.alignment profile-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP91-201/neg_patterns.ENCSR898XMH_ChIP_ZFP91_K562_ENCSR673ZFH_profile_pattern_10.n_58-vs-ZFP91-201.alignment profile-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP91-201/neg_patterns.ENCSR898XMH_ChIP_ZFP91_K562_ENCSR673ZFH_profile_pattern_11.n_52-vs-ZFP91-201.alignment profile-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP91-201/neg_patterns.ENCSR898XMH_ChIP_ZFP91_K562_ENCSR673ZFH_profile_pattern_12.n_52-vs-ZFP91-201.alignment profile-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP91-201/neg_patterns.ENCSR898XMH_ChIP_ZFP91_K562_ENCSR673ZFH_profile_pattern_13.n_46-vs-ZFP91-201.alignment profile-znf_b1h_alignment/ZFP91-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR678KUJ_ChIP_ZFP91_HepG2_ENCSR551SZJ_profile_pattern_5.n_1297-vs-ZFP91-201.alignment profile-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR678KUJ_ChIP_ZFP91_HepG2_ENCSR551SZJ_profile_pattern_6.n_1176-vs-ZFP91-201.alignment profile-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR678KUJ_ChIP_ZFP91_HepG2_ENCSR551SZJ_profile_pattern_7.n_933-vs-ZFP91-201.alignment profile-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR678KUJ_ChIP_ZFP91_HepG2_ENCSR551SZJ_profile_pattern_8.n_581-vs-ZFP91-201.alignment profile-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR678KUJ_ChIP_ZFP91_HepG2_ENCSR551SZJ_profile_pattern_9.n_460-vs-ZFP91-201.alignment profile-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR898XMH_ChIP_ZFP91_K562_ENCSR673ZFH_profile_pattern_0.n_5922-vs-ZFP91-201.alignment profile-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR898XMH_ChIP_ZFP91_K562_ENCSR673ZFH_profile_pattern_10.n_87-vs-ZFP91-201.alignment profile-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR898XMH_ChIP_ZFP91_K562_ENCSR673ZFH_profile_pattern_11.n_45-vs-ZFP91-201.alignment profile-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR898XMH_ChIP_ZFP91_K562_ENCSR673ZFH_profile_pattern_12.n_43-vs-ZFP91-201.alignment profile-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR898XMH_ChIP_ZFP91_K562_ENCSR673ZFH_profile_pattern_13.n_27-vs-ZFP91-201.alignment profile-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR898XMH_ChIP_ZFP91_K562_ENCSR673ZFH_profile_pattern_1.n_2449-vs-ZFP91-201.alignment profile-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR898XMH_ChIP_ZFP91_K562_ENCSR673ZFH_profile_pattern_2.n_1064-vs-ZFP91-201.alignment profile-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR898XMH_ChIP_ZFP91_K562_ENCSR673ZFH_profile_pattern_3.n_449-vs-ZFP91-201.alignment profile-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR898XMH_ChIP_ZFP91_K562_ENCSR673ZFH_profile_pattern_4.n_352-vs-ZFP91-201.alignment profile-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR898XMH_ChIP_ZFP91_K562_ENCSR673ZFH_profile_pattern_5.n_232-vs-ZFP91-201.alignment profile-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR898XMH_ChIP_ZFP91_K562_ENCSR673ZFH_profile_pattern_6.n_177-vs-ZFP91-201.alignment profile-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR898XMH_ChIP_ZFP91_K562_ENCSR673ZFH_profile_pattern_7.n_133-vs-ZFP91-201.alignment profile-znf_b1h_alignment/ZFP91-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZFP91-201/pos_patterns.ENCSR898XMH_ChIP_ZFP91_K562_ENCSR673ZFH_profile_pattern_8.n_120-vs-ZFP91-201.alignment profile-znf_b1h_alignment/ZFP91-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZKSCAN1-201/neg_patterns.ENCSR449UFF_ChIP_ZKSCAN1_MCF-7_ENCSR836IBM_profile_pattern_4.n_23-vs-ZKSCAN1-201.alignment profile-znf_b1h_alignment/ZKSCAN1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZKSCAN1-201/neg_patterns.ENCSR882ERE_ChIP_ZKSCAN1_K562_ENCSR392WCU_profile_pattern_1.n_97-vs-ZKSCAN1-201.alignment profile-znf_b1h_alignment/ZKSCAN1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZKSCAN1-201/pos_patterns.ENCSR000ECJ_ChIP_ZKSCAN1_HeLa-S3_ENCSR467JKG_profile_pattern_1.n_452-vs-ZKSCAN1-201.alignment profile-znf_b1h_alignment/ZKSCAN1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZKSCAN1-201/pos_patterns.ENCSR157CAU_ChIP_ZKSCAN1_HepG2_ENCSR865HSG_profile_pattern_0.n_4445-vs-ZKSCAN1-201.alignment profile-znf_b1h_alignment/ZKSCAN1-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZKSCAN1-201/pos_patterns.ENCSR157CAU_ChIP_ZKSCAN1_HepG2_ENCSR865HSG_profile_pattern_1.n_781-vs-ZKSCAN1-201.alignment profile-znf_b1h_alignment/ZKSCAN1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZKSCAN1-201/pos_patterns.ENCSR157CAU_ChIP_ZKSCAN1_HepG2_ENCSR865HSG_profile_pattern_5.n_33-vs-ZKSCAN1-201.alignment profile-znf_b1h_alignment/ZKSCAN1-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN22-201/pos_patterns.ENCSR050KWL_ChIP_ZSCAN22_HepG2_ENCSR880BAN_profile_pattern_1.n_219-vs-ZSCAN22-201.alignment profile-znf_b1h_alignment/ZSCAN22-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN22-201/pos_patterns.ENCSR050KWL_ChIP_ZSCAN22_HepG2_ENCSR880BAN_profile_pattern_4.n_86-vs-ZSCAN22-201.alignment profile-znf_b1h_alignment/ZSCAN22-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN23-201/neg_patterns.ENCSR705ASR_ChIP_ZSCAN23_HEK293_ENCSR706OQL_profile_pattern_0.n_43-vs-ZSCAN23-201.alignment profile-znf_b1h_alignment/ZSCAN23-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN23-201/neg_patterns.ENCSR705ASR_ChIP_ZSCAN23_HEK293_ENCSR706OQL_profile_pattern_4.n_25-vs-ZSCAN23-201.alignment profile-znf_b1h_alignment/ZSCAN23-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN25-202/neg_patterns.ENCSR037LQB_ChIP_ZSCAN25_HepG2_ENCSR773HKF_profile_pattern_5.n_46-vs-ZSCAN25-202.alignment profile-znf_b1h_alignment/ZSCAN25-202/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN25-202/pos_patterns.ENCSR037LQB_ChIP_ZSCAN25_HepG2_ENCSR773HKF_profile_pattern_0.n_3767-vs-ZSCAN25-202.alignment profile-znf_b1h_alignment/ZSCAN25-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN25-202/pos_patterns.ENCSR037LQB_ChIP_ZSCAN25_HepG2_ENCSR773HKF_profile_pattern_10.n_117-vs-ZSCAN25-202.alignment profile-znf_b1h_alignment/ZSCAN25-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN25-202/pos_patterns.ENCSR037LQB_ChIP_ZSCAN25_HepG2_ENCSR773HKF_profile_pattern_11.n_99-vs-ZSCAN25-202.alignment profile-znf_b1h_alignment/ZSCAN25-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN25-202/pos_patterns.ENCSR037LQB_ChIP_ZSCAN25_HepG2_ENCSR773HKF_profile_pattern_12.n_82-vs-ZSCAN25-202.alignment profile-znf_b1h_alignment/ZSCAN25-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN25-202/pos_patterns.ENCSR037LQB_ChIP_ZSCAN25_HepG2_ENCSR773HKF_profile_pattern_13.n_57-vs-ZSCAN25-202.alignment profile-znf_b1h_alignment/ZSCAN25-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN25-202/pos_patterns.ENCSR037LQB_ChIP_ZSCAN25_HepG2_ENCSR773HKF_profile_pattern_14.n_55-vs-ZSCAN25-202.alignment profile-znf_b1h_alignment/ZSCAN25-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN25-202/pos_patterns.ENCSR037LQB_ChIP_ZSCAN25_HepG2_ENCSR773HKF_profile_pattern_1.n_2732-vs-ZSCAN25-202.alignment profile-znf_b1h_alignment/ZSCAN25-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN25-202/pos_patterns.ENCSR037LQB_ChIP_ZSCAN25_HepG2_ENCSR773HKF_profile_pattern_2.n_2325-vs-ZSCAN25-202.alignment profile-znf_b1h_alignment/ZSCAN25-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN25-202/pos_patterns.ENCSR037LQB_ChIP_ZSCAN25_HepG2_ENCSR773HKF_profile_pattern_3.n_1158-vs-ZSCAN25-202.alignment profile-znf_b1h_alignment/ZSCAN25-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN25-202/pos_patterns.ENCSR037LQB_ChIP_ZSCAN25_HepG2_ENCSR773HKF_profile_pattern_4.n_625-vs-ZSCAN25-202.alignment profile-znf_b1h_alignment/ZSCAN25-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN25-202/pos_patterns.ENCSR037LQB_ChIP_ZSCAN25_HepG2_ENCSR773HKF_profile_pattern_5.n_620-vs-ZSCAN25-202.alignment profile-znf_b1h_alignment/ZSCAN25-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN25-202/pos_patterns.ENCSR037LQB_ChIP_ZSCAN25_HepG2_ENCSR773HKF_profile_pattern_6.n_452-vs-ZSCAN25-202.alignment profile-znf_b1h_alignment/ZSCAN25-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN25-202/pos_patterns.ENCSR037LQB_ChIP_ZSCAN25_HepG2_ENCSR773HKF_profile_pattern_7.n_349-vs-ZSCAN25-202.alignment profile-znf_b1h_alignment/ZSCAN25-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN25-202/pos_patterns.ENCSR037LQB_ChIP_ZSCAN25_HepG2_ENCSR773HKF_profile_pattern_8.n_311-vs-ZSCAN25-202.alignment profile-znf_b1h_alignment/ZSCAN25-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN25-202/pos_patterns.ENCSR037LQB_ChIP_ZSCAN25_HepG2_ENCSR773HKF_profile_pattern_9.n_153-vs-ZSCAN25-202.alignment profile-znf_b1h_alignment/ZSCAN25-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN26-201/pos_patterns.ENCSR501NSC_ChIP_ZSCAN26_HEK293_ENCSR408NKD_profile_pattern_0.n_446-vs-ZSCAN26-201.alignment profile-znf_b1h_alignment/ZSCAN26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN26-201/pos_patterns.ENCSR501NSC_ChIP_ZSCAN26_HEK293_ENCSR408NKD_profile_pattern_1.n_165-vs-ZSCAN26-201.alignment profile-znf_b1h_alignment/ZSCAN26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN26-201/pos_patterns.ENCSR501NSC_ChIP_ZSCAN26_HEK293_ENCSR408NKD_profile_pattern_2.n_60-vs-ZSCAN26-201.alignment profile-znf_b1h_alignment/ZSCAN26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN26-201/pos_patterns.ENCSR501NSC_ChIP_ZSCAN26_HEK293_ENCSR408NKD_profile_pattern_3.n_53-vs-ZSCAN26-201.alignment profile-znf_b1h_alignment/ZSCAN26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN26-201/pos_patterns.ENCSR501NSC_ChIP_ZSCAN26_HEK293_ENCSR408NKD_profile_pattern_4.n_53-vs-ZSCAN26-201.alignment profile-znf_b1h_alignment/ZSCAN26-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN29-202/Hughes_GR_models_ZSCAN29_profile-pos.pattern_0.n_35-vs-ZSCAN29-202.alignment profile-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN29-202/Hughes_GR_models_ZSCAN29_profile-pos.pattern_1.n_35-vs-ZSCAN29-202.alignment profile-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN29-202/Hughes_GR_models_ZSCAN29_profile-pos.pattern_2.n_28-vs-ZSCAN29-202.alignment profile-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN29-202/Hughes_GR_models_ZSCAN29_profile-pos.pattern_3.n_27-vs-ZSCAN29-202.alignment profile-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN29-202/Hughes_GR_models_ZSCAN29_profile-pos.pattern_4.n_27-vs-ZSCAN29-202.alignment profile-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN29-202/neg_patterns.ENCSR175SZH_ChIP_ZSCAN29_K562_ENCSR451MPB_profile_pattern_0.n_783-vs-ZSCAN29-202.alignment profile-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN29-202/neg_patterns.ENCSR175SZH_ChIP_ZSCAN29_K562_ENCSR451MPB_profile_pattern_1.n_151-vs-ZSCAN29-202.alignment profile-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN29-202/neg_patterns.ENCSR175SZH_ChIP_ZSCAN29_K562_ENCSR451MPB_profile_pattern_2.n_118-vs-ZSCAN29-202.alignment profile-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN29-202/neg_patterns.ENCSR175SZH_ChIP_ZSCAN29_K562_ENCSR451MPB_profile_pattern_3.n_52-vs-ZSCAN29-202.alignment profile-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN29-202/neg_patterns.ENCSR175SZH_ChIP_ZSCAN29_K562_ENCSR451MPB_profile_pattern_4.n_40-vs-ZSCAN29-202.alignment profile-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN29-202/neg_patterns.ENCSR175SZH_ChIP_ZSCAN29_K562_ENCSR451MPB_profile_pattern_5.n_23-vs-ZSCAN29-202.alignment profile-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN29-202/neg_patterns.ENCSR412YGM_ChIP_ZSCAN29_GM12878_ENCSR268UNG_profile_pattern_0.n_79-vs-ZSCAN29-202.alignment profile-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN29-202/neg_patterns.ENCSR412YGM_ChIP_ZSCAN29_GM12878_ENCSR268UNG_profile_pattern_1.n_40-vs-ZSCAN29-202.alignment profile-znf_b1h_alignment/ZSCAN29-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN29-202/neg_patterns.ENCSR422VAG_ChIP_ZSCAN29_HepG2_ENCSR171VVK_profile_pattern_0.n_69-vs-ZSCAN29-202.alignment profile-znf_b1h_alignment/ZSCAN29-202/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR768VNZ_ChIP_ZSCAN30_HEK293_ENCSR210YNP_profile_pattern_1.n_2398-vs-ZSCAN30-201.alignment profile-znf_b1h_alignment/ZSCAN30-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR768VNZ_ChIP_ZSCAN30_HEK293_ENCSR210YNP_profile_pattern_9.n_278-vs-ZSCAN30-201.alignment profile-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_profile_pattern_0.n_494-vs-ZSCAN30-201.alignment profile-znf_b1h_alignment/ZSCAN30-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_profile_pattern_11.n_149-vs-ZSCAN30-201.alignment profile-znf_b1h_alignment/ZSCAN30-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_profile_pattern_14.n_101-vs-ZSCAN30-201.alignment profile-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_profile_pattern_15.n_86-vs-ZSCAN30-201.alignment profile-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_profile_pattern_16.n_77-vs-ZSCAN30-201.alignment profile-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_profile_pattern_17.n_76-vs-ZSCAN30-201.alignment profile-znf_b1h_alignment/ZSCAN30-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_profile_pattern_19.n_22-vs-ZSCAN30-201.alignment profile-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_profile_pattern_1.n_268-vs-ZSCAN30-201.alignment profile-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_profile_pattern_2.n_239-vs-ZSCAN30-201.alignment profile-znf_b1h_alignment/ZSCAN30-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_profile_pattern_3.n_238-vs-ZSCAN30-201.alignment profile-znf_b1h_alignment/ZSCAN30-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN30-201/pos_patterns.ENCSR795CKZ_ChIP_ZSCAN30_HepG2_ENCSR128AHG_profile_pattern_9.n_162-vs-ZSCAN30-201.alignment profile-znf_b1h_alignment/ZSCAN30-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN31-201/Hughes_GR_models_ZSCAN31_profile-pos.pattern_2.n_63-vs-ZSCAN31-201.alignment profile-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN31-201/Hughes_GR_models_ZSCAN31_profile-pos.pattern_3.n_32-vs-ZSCAN31-201.alignment profile-znf_b1h_alignment/ZSCAN31-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN31-201/Hughes_NB_models_ZSCAN31_profile-pos.pattern_1.n_26-vs-ZSCAN31-201.alignment profile-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN31-201/neg_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_profile_pattern_0.n_59-vs-ZSCAN31-201.alignment profile-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN31-201/neg_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_profile_pattern_1.n_56-vs-ZSCAN31-201.alignment profile-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN31-201/neg_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_profile_pattern_2.n_45-vs-ZSCAN31-201.alignment profile-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN31-201/neg_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_profile_pattern_3.n_35-vs-ZSCAN31-201.alignment profile-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN31-201/neg_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_profile_pattern_4.n_29-vs-ZSCAN31-201.alignment profile-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN31-201/neg_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_profile_pattern_5.n_27-vs-ZSCAN31-201.alignment profile-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN31-201/neg_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_profile_pattern_6.n_26-vs-ZSCAN31-201.alignment profile-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_profile_pattern_0.n_3123-vs-ZSCAN31-201.alignment profile-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_profile_pattern_10.n_308-vs-ZSCAN31-201.alignment profile-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_profile_pattern_11.n_294-vs-ZSCAN31-201.alignment profile-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_profile_pattern_12.n_243-vs-ZSCAN31-201.alignment profile-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_profile_pattern_13.n_202-vs-ZSCAN31-201.alignment profile-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_profile_pattern_14.n_129-vs-ZSCAN31-201.alignment profile-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_profile_pattern_15.n_94-vs-ZSCAN31-201.alignment profile-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_profile_pattern_16.n_55-vs-ZSCAN31-201.alignment profile-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_profile_pattern_17.n_54-vs-ZSCAN31-201.alignment profile-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_profile_pattern_18.n_36-vs-ZSCAN31-201.alignment profile-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_profile_pattern_19.n_31-vs-ZSCAN31-201.alignment profile-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_profile_pattern_1.n_1963-vs-ZSCAN31-201.alignment profile-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_profile_pattern_2.n_1559-vs-ZSCAN31-201.alignment profile-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_profile_pattern_3.n_1295-vs-ZSCAN31-201.alignment profile-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_profile_pattern_4.n_656-vs-ZSCAN31-201.alignment profile-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_profile_pattern_5.n_454-vs-ZSCAN31-201.alignment profile-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_profile_pattern_6.n_442-vs-ZSCAN31-201.alignment profile-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_profile_pattern_7.n_421-vs-ZSCAN31-201.alignment profile-znf_b1h_alignment/ZSCAN31-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN31-201/pos_patterns.ENCSR493VBX_ChIP_ZSCAN31_HepG2_ENCSR887KCX_profile_pattern_8.n_374-vs-ZSCAN31-201.alignment profile-znf_b1h_alignment/ZSCAN31-201/
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python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN5C-202/pos_patterns.ENCSR731AGO_ChIP_ZSCAN5C_HEK293_ENCSR905ZVU_profile_pattern_1.n_2050-vs-ZSCAN5C-202.alignment profile-znf_b1h_alignment/ZSCAN5C-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN5C-202/pos_patterns.ENCSR731AGO_ChIP_ZSCAN5C_HEK293_ENCSR905ZVU_profile_pattern_2.n_1813-vs-ZSCAN5C-202.alignment profile-znf_b1h_alignment/ZSCAN5C-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN5C-202/pos_patterns.ENCSR731AGO_ChIP_ZSCAN5C_HEK293_ENCSR905ZVU_profile_pattern_3.n_1110-vs-ZSCAN5C-202.alignment profile-znf_b1h_alignment/ZSCAN5C-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN5C-202/pos_patterns.ENCSR731AGO_ChIP_ZSCAN5C_HEK293_ENCSR905ZVU_profile_pattern_4.n_607-vs-ZSCAN5C-202.alignment profile-znf_b1h_alignment/ZSCAN5C-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN5C-202/pos_patterns.ENCSR731AGO_ChIP_ZSCAN5C_HEK293_ENCSR905ZVU_profile_pattern_5.n_430-vs-ZSCAN5C-202.alignment profile-znf_b1h_alignment/ZSCAN5C-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN5C-202/pos_patterns.ENCSR731AGO_ChIP_ZSCAN5C_HEK293_ENCSR905ZVU_profile_pattern_6.n_404-vs-ZSCAN5C-202.alignment profile-znf_b1h_alignment/ZSCAN5C-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN5C-202/pos_patterns.ENCSR731AGO_ChIP_ZSCAN5C_HEK293_ENCSR905ZVU_profile_pattern_7.n_241-vs-ZSCAN5C-202.alignment profile-znf_b1h_alignment/ZSCAN5C-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN5C-202/pos_patterns.ENCSR731AGO_ChIP_ZSCAN5C_HEK293_ENCSR905ZVU_profile_pattern_8.n_227-vs-ZSCAN5C-202.alignment profile-znf_b1h_alignment/ZSCAN5C-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN5C-202/pos_patterns.ENCSR731AGO_ChIP_ZSCAN5C_HEK293_ENCSR905ZVU_profile_pattern_9.n_120-vs-ZSCAN5C-202.alignment profile-znf_b1h_alignment/ZSCAN5C-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN9-201/neg_patterns.ENCSR712FAM_ChIP_ZSCAN9_HepG2_ENCSR755NSQ_profile_pattern_0.n_151-vs-ZSCAN9-201.alignment profile-znf_b1h_alignment/ZSCAN9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN9-201/neg_patterns.ENCSR712FAM_ChIP_ZSCAN9_HepG2_ENCSR755NSQ_profile_pattern_1.n_79-vs-ZSCAN9-201.alignment profile-znf_b1h_alignment/ZSCAN9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN9-201/neg_patterns.ENCSR712FAM_ChIP_ZSCAN9_HepG2_ENCSR755NSQ_profile_pattern_2.n_74-vs-ZSCAN9-201.alignment profile-znf_b1h_alignment/ZSCAN9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN9-201/neg_patterns.ENCSR712FAM_ChIP_ZSCAN9_HepG2_ENCSR755NSQ_profile_pattern_3.n_67-vs-ZSCAN9-201.alignment profile-znf_b1h_alignment/ZSCAN9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN9-201/neg_patterns.ENCSR712FAM_ChIP_ZSCAN9_HepG2_ENCSR755NSQ_profile_pattern_4.n_67-vs-ZSCAN9-201.alignment profile-znf_b1h_alignment/ZSCAN9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN9-201/neg_patterns.ENCSR712FAM_ChIP_ZSCAN9_HepG2_ENCSR755NSQ_profile_pattern_5.n_63-vs-ZSCAN9-201.alignment profile-znf_b1h_alignment/ZSCAN9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN9-201/neg_patterns.ENCSR712FAM_ChIP_ZSCAN9_HepG2_ENCSR755NSQ_profile_pattern_6.n_62-vs-ZSCAN9-201.alignment profile-znf_b1h_alignment/ZSCAN9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN9-201/neg_patterns.ENCSR712FAM_ChIP_ZSCAN9_HepG2_ENCSR755NSQ_profile_pattern_7.n_56-vs-ZSCAN9-201.alignment profile-znf_b1h_alignment/ZSCAN9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN9-201/neg_patterns.ENCSR712FAM_ChIP_ZSCAN9_HepG2_ENCSR755NSQ_profile_pattern_8.n_51-vs-ZSCAN9-201.alignment profile-znf_b1h_alignment/ZSCAN9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN9-201/neg_patterns.ENCSR712FAM_ChIP_ZSCAN9_HepG2_ENCSR755NSQ_profile_pattern_9.n_50-vs-ZSCAN9-201.alignment profile-znf_b1h_alignment/ZSCAN9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN9-201/pos_patterns.ENCSR712FAM_ChIP_ZSCAN9_HepG2_ENCSR755NSQ_profile_pattern_0.n_2302-vs-ZSCAN9-201.alignment profile-znf_b1h_alignment/ZSCAN9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN9-201/pos_patterns.ENCSR712FAM_ChIP_ZSCAN9_HepG2_ENCSR755NSQ_profile_pattern_10.n_319-vs-ZSCAN9-201.alignment profile-znf_b1h_alignment/ZSCAN9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN9-201/pos_patterns.ENCSR712FAM_ChIP_ZSCAN9_HepG2_ENCSR755NSQ_profile_pattern_11.n_305-vs-ZSCAN9-201.alignment profile-znf_b1h_alignment/ZSCAN9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN9-201/pos_patterns.ENCSR712FAM_ChIP_ZSCAN9_HepG2_ENCSR755NSQ_profile_pattern_12.n_229-vs-ZSCAN9-201.alignment profile-znf_b1h_alignment/ZSCAN9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN9-201/pos_patterns.ENCSR712FAM_ChIP_ZSCAN9_HepG2_ENCSR755NSQ_profile_pattern_13.n_154-vs-ZSCAN9-201.alignment profile-znf_b1h_alignment/ZSCAN9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN9-201/pos_patterns.ENCSR712FAM_ChIP_ZSCAN9_HepG2_ENCSR755NSQ_profile_pattern_14.n_149-vs-ZSCAN9-201.alignment profile-znf_b1h_alignment/ZSCAN9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN9-201/pos_patterns.ENCSR712FAM_ChIP_ZSCAN9_HepG2_ENCSR755NSQ_profile_pattern_15.n_62-vs-ZSCAN9-201.alignment profile-znf_b1h_alignment/ZSCAN9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN9-201/pos_patterns.ENCSR712FAM_ChIP_ZSCAN9_HepG2_ENCSR755NSQ_profile_pattern_16.n_54-vs-ZSCAN9-201.alignment profile-znf_b1h_alignment/ZSCAN9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN9-201/pos_patterns.ENCSR712FAM_ChIP_ZSCAN9_HepG2_ENCSR755NSQ_profile_pattern_17.n_44-vs-ZSCAN9-201.alignment profile-znf_b1h_alignment/ZSCAN9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN9-201/pos_patterns.ENCSR712FAM_ChIP_ZSCAN9_HepG2_ENCSR755NSQ_profile_pattern_18.n_20-vs-ZSCAN9-201.alignment profile-znf_b1h_alignment/ZSCAN9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN9-201/pos_patterns.ENCSR712FAM_ChIP_ZSCAN9_HepG2_ENCSR755NSQ_profile_pattern_19.n_20-vs-ZSCAN9-201.alignment profile-znf_b1h_alignment/ZSCAN9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN9-201/pos_patterns.ENCSR712FAM_ChIP_ZSCAN9_HepG2_ENCSR755NSQ_profile_pattern_1.n_1766-vs-ZSCAN9-201.alignment profile-znf_b1h_alignment/ZSCAN9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN9-201/pos_patterns.ENCSR712FAM_ChIP_ZSCAN9_HepG2_ENCSR755NSQ_profile_pattern_2.n_1720-vs-ZSCAN9-201.alignment profile-znf_b1h_alignment/ZSCAN9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN9-201/pos_patterns.ENCSR712FAM_ChIP_ZSCAN9_HepG2_ENCSR755NSQ_profile_pattern_3.n_1570-vs-ZSCAN9-201.alignment profile-znf_b1h_alignment/ZSCAN9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN9-201/pos_patterns.ENCSR712FAM_ChIP_ZSCAN9_HepG2_ENCSR755NSQ_profile_pattern_4.n_1233-vs-ZSCAN9-201.alignment profile-znf_b1h_alignment/ZSCAN9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN9-201/pos_patterns.ENCSR712FAM_ChIP_ZSCAN9_HepG2_ENCSR755NSQ_profile_pattern_5.n_598-vs-ZSCAN9-201.alignment profile-znf_b1h_alignment/ZSCAN9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN9-201/pos_patterns.ENCSR712FAM_ChIP_ZSCAN9_HepG2_ENCSR755NSQ_profile_pattern_6.n_591-vs-ZSCAN9-201.alignment profile-znf_b1h_alignment/ZSCAN9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN9-201/pos_patterns.ENCSR712FAM_ChIP_ZSCAN9_HepG2_ENCSR755NSQ_profile_pattern_7.n_496-vs-ZSCAN9-201.alignment profile-znf_b1h_alignment/ZSCAN9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN9-201/pos_patterns.ENCSR712FAM_ChIP_ZSCAN9_HepG2_ENCSR755NSQ_profile_pattern_8.n_439-vs-ZSCAN9-201.alignment profile-znf_b1h_alignment/ZSCAN9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZSCAN9-201/pos_patterns.ENCSR712FAM_ChIP_ZSCAN9_HepG2_ENCSR755NSQ_profile_pattern_9.n_331-vs-ZSCAN9-201.alignment profile-znf_b1h_alignment/ZSCAN9-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDB-201/neg_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_profile_pattern_0.n_190-vs-ZXDB-201.alignment profile-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDB-201/neg_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_profile_pattern_1.n_92-vs-ZXDB-201.alignment profile-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDB-201/neg_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_profile_pattern_2.n_54-vs-ZXDB-201.alignment profile-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDB-201/neg_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_profile_pattern_3.n_49-vs-ZXDB-201.alignment profile-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDB-201/neg_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_profile_pattern_4.n_45-vs-ZXDB-201.alignment profile-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_profile_pattern_0.n_2984-vs-ZXDB-201.alignment profile-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_profile_pattern_10.n_596-vs-ZXDB-201.alignment profile-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_profile_pattern_11.n_381-vs-ZXDB-201.alignment profile-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_profile_pattern_12.n_367-vs-ZXDB-201.alignment profile-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_profile_pattern_13.n_308-vs-ZXDB-201.alignment profile-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_profile_pattern_14.n_243-vs-ZXDB-201.alignment profile-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_profile_pattern_15.n_230-vs-ZXDB-201.alignment profile-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_profile_pattern_16.n_207-vs-ZXDB-201.alignment profile-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_profile_pattern_17.n_195-vs-ZXDB-201.alignment profile-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_profile_pattern_18.n_76-vs-ZXDB-201.alignment profile-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_profile_pattern_19.n_72-vs-ZXDB-201.alignment profile-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_profile_pattern_1.n_2390-vs-ZXDB-201.alignment profile-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_profile_pattern_20.n_43-vs-ZXDB-201.alignment profile-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_profile_pattern_21.n_40-vs-ZXDB-201.alignment profile-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_profile_pattern_22.n_29-vs-ZXDB-201.alignment profile-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_profile_pattern_23.n_24-vs-ZXDB-201.alignment profile-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_profile_pattern_2.n_2162-vs-ZXDB-201.alignment profile-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_profile_pattern_3.n_2108-vs-ZXDB-201.alignment profile-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_profile_pattern_4.n_1886-vs-ZXDB-201.alignment profile-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_profile_pattern_5.n_1529-vs-ZXDB-201.alignment profile-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_profile_pattern_6.n_1029-vs-ZXDB-201.alignment profile-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_profile_pattern_7.n_1013-vs-ZXDB-201.alignment profile-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_profile_pattern_8.n_868-vs-ZXDB-201.alignment profile-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDB-201/pos_patterns.ENCSR559IOZ_ChIP_ZXDB_HEK293_ENCSR987TUW_profile_pattern_9.n_701-vs-ZXDB-201.alignment profile-znf_b1h_alignment/ZXDB-201/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-202/neg_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_0.n_61-vs-ZXDC-202.alignment profile-znf_b1h_alignment/ZXDC-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-202/neg_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_1.n_58-vs-ZXDC-202.alignment profile-znf_b1h_alignment/ZXDC-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-202/neg_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_2.n_55-vs-ZXDC-202.alignment profile-znf_b1h_alignment/ZXDC-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-202/neg_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_3.n_34-vs-ZXDC-202.alignment profile-znf_b1h_alignment/ZXDC-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-202/neg_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_4.n_28-vs-ZXDC-202.alignment profile-znf_b1h_alignment/ZXDC-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-202/neg_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_5.n_20-vs-ZXDC-202.alignment profile-znf_b1h_alignment/ZXDC-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-202/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_0.n_881-vs-ZXDC-202.alignment profile-znf_b1h_alignment/ZXDC-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-202/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_10.n_162-vs-ZXDC-202.alignment profile-znf_b1h_alignment/ZXDC-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-202/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_11.n_150-vs-ZXDC-202.alignment profile-znf_b1h_alignment/ZXDC-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-202/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_12.n_143-vs-ZXDC-202.alignment profile-znf_b1h_alignment/ZXDC-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-202/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_13.n_136-vs-ZXDC-202.alignment profile-znf_b1h_alignment/ZXDC-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-202/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_14.n_108-vs-ZXDC-202.alignment profile-znf_b1h_alignment/ZXDC-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-202/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_15.n_92-vs-ZXDC-202.alignment profile-znf_b1h_alignment/ZXDC-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-202/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_16.n_92-vs-ZXDC-202.alignment profile-znf_b1h_alignment/ZXDC-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-202/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_17.n_66-vs-ZXDC-202.alignment profile-znf_b1h_alignment/ZXDC-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-202/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_18.n_40-vs-ZXDC-202.alignment profile-znf_b1h_alignment/ZXDC-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-202/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_19.n_37-vs-ZXDC-202.alignment profile-znf_b1h_alignment/ZXDC-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-202/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_1.n_609-vs-ZXDC-202.alignment profile-znf_b1h_alignment/ZXDC-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-202/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_20.n_22-vs-ZXDC-202.alignment profile-znf_b1h_alignment/ZXDC-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-202/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_2.n_507-vs-ZXDC-202.alignment profile-znf_b1h_alignment/ZXDC-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-202/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_3.n_495-vs-ZXDC-202.alignment profile-znf_b1h_alignment/ZXDC-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-202/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_4.n_447-vs-ZXDC-202.alignment profile-znf_b1h_alignment/ZXDC-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-202/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_5.n_427-vs-ZXDC-202.alignment profile-znf_b1h_alignment/ZXDC-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-202/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_6.n_410-vs-ZXDC-202.alignment profile-znf_b1h_alignment/ZXDC-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-202/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_7.n_247-vs-ZXDC-202.alignment profile-znf_b1h_alignment/ZXDC-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-202/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_8.n_236-vs-ZXDC-202.alignment profile-znf_b1h_alignment/ZXDC-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-202/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_9.n_204-vs-ZXDC-202.alignment profile-znf_b1h_alignment/ZXDC-202/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-204/neg_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_0.n_61-vs-ZXDC-204.alignment profile-znf_b1h_alignment/ZXDC-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-204/neg_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_1.n_58-vs-ZXDC-204.alignment profile-znf_b1h_alignment/ZXDC-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-204/neg_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_2.n_55-vs-ZXDC-204.alignment profile-znf_b1h_alignment/ZXDC-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-204/neg_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_3.n_34-vs-ZXDC-204.alignment profile-znf_b1h_alignment/ZXDC-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-204/neg_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_4.n_28-vs-ZXDC-204.alignment profile-znf_b1h_alignment/ZXDC-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-204/neg_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_5.n_20-vs-ZXDC-204.alignment profile-znf_b1h_alignment/ZXDC-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-204/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_0.n_881-vs-ZXDC-204.alignment profile-znf_b1h_alignment/ZXDC-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-204/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_10.n_162-vs-ZXDC-204.alignment profile-znf_b1h_alignment/ZXDC-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-204/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_11.n_150-vs-ZXDC-204.alignment profile-znf_b1h_alignment/ZXDC-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-204/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_12.n_143-vs-ZXDC-204.alignment profile-znf_b1h_alignment/ZXDC-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-204/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_13.n_136-vs-ZXDC-204.alignment profile-znf_b1h_alignment/ZXDC-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-204/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_14.n_108-vs-ZXDC-204.alignment profile-znf_b1h_alignment/ZXDC-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-204/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_15.n_92-vs-ZXDC-204.alignment profile-znf_b1h_alignment/ZXDC-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-204/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_16.n_92-vs-ZXDC-204.alignment profile-znf_b1h_alignment/ZXDC-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-204/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_17.n_66-vs-ZXDC-204.alignment profile-znf_b1h_alignment/ZXDC-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-204/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_18.n_40-vs-ZXDC-204.alignment profile-znf_b1h_alignment/ZXDC-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-204/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_19.n_37-vs-ZXDC-204.alignment profile-znf_b1h_alignment/ZXDC-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-204/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_1.n_609-vs-ZXDC-204.alignment profile-znf_b1h_alignment/ZXDC-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-204/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_20.n_22-vs-ZXDC-204.alignment profile-znf_b1h_alignment/ZXDC-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-204/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_2.n_507-vs-ZXDC-204.alignment profile-znf_b1h_alignment/ZXDC-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-204/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_3.n_495-vs-ZXDC-204.alignment profile-znf_b1h_alignment/ZXDC-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-204/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_4.n_447-vs-ZXDC-204.alignment profile-znf_b1h_alignment/ZXDC-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-204/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_5.n_427-vs-ZXDC-204.alignment profile-znf_b1h_alignment/ZXDC-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-204/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_6.n_410-vs-ZXDC-204.alignment profile-znf_b1h_alignment/ZXDC-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-204/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_7.n_247-vs-ZXDC-204.alignment profile-znf_b1h_alignment/ZXDC-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-204/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_8.n_236-vs-ZXDC-204.alignment profile-znf_b1h_alignment/ZXDC-204/
python /oak/stanford/groups/akundaje/marinovg/papers/2023_ZNFs/2025-10-15-final-figures/motif-alignment-Chang-logos-V2.py profile-znf_b1h_alignment/ZXDC-204/pos_patterns.ENCSR347PUQ_ChIP_ZXDC_HepG2_ENCSR062NDM_profile_pattern_9.n_204-vs-ZXDC-204.alignment profile-znf_b1h_alignment/ZXDC-204/