42	21.4	0.0	0.0	chr1	10194431	10194516	(238761906)	+	GA-rich	Low_complexity	1	86	(0)	15299
19	17.3	2.6	0.0	chr1	11749229	11749267	(237207155)	+	(CT)n	Simple_repeat	1	40	(0)	18376
33	3.1	0.0	0.0	chr1	12433918	12433950	(236522472)	+	(GA)n	Simple_repeat	1	33	(0)	19789
18	0.0	0.0	0.0	chr1	12433951	12433970	(236522452)	+	(TG)n	Simple_repeat	1	20	(0)	19790
14	0.0	0.0	0.0	chr1	12433970	12433987	(236522435)	+	(GGA)n	Simple_repeat	1	18	(0)	19791
27	9.8	0.0	0.0	chr1	19315709	19315752	(229640670)	+	(TCTC)n	Simple_repeat	1	44	(0)	33415
254	28.9	14.7	1.1	chr1	19315805	19315986	(229640436)	+	MIR	SINE/MIR	4	214	(48)	33416
263	24.6	13.5	2.4	chr1	31334061	31334185	(217622237)	+	Helitron3Na_Mam	RC/Helitron	62	202	(284)	60446
31	0.0	0.0	0.0	chr1	31334304	31334337	(217622085)	+	(TC)n	Simple_repeat	1	34	(0)	60447
61	0.0	0.0	0.0	chr1	31334338	31334389	(217622033)	+	(TG)n	Simple_repeat	1	52	(0)	60448
9211	20.1	5.6	6.1	chr1	32923851	32926332	(216030090)	C	HERVS71-int	LTR/ERV1	(6507)	2471	4	64043
37	0.0	0.0	0.0	chr1	33455914	33455945	(215500477)	+	(AG)n	Simple_repeat	1	32	(0)	65138
55	0.0	0.0	0.0	chr1	37190720	37190766	(211765656)	+	(CT)n	Simple_repeat	1	47	(0)	72269
2150	13.4	0.0	0.3	chr1	39696218	39696390	(209260032)	+	AluSx	SINE/Alu	134	305	(7)	77221
1019	21.9	0.5	5.8	chr1	39696391	39696458	(209259964)	+	MIR	SINE/MIR	153	219	(43)	77220
33	2.6	5.0	0.0	chr1	39696546	39696585	(209259837)	+	(TC)n	Simple_repeat	1	42	(0)	77223
30	0.0	0.0	0.0	chr1	54407750	54407777	(194548645)	+	(T)n	Simple_repeat	1	28	(0)	105002
43	2.5	0.0	0.0	chr1	59016636	59016676	(189939746)	+	(CT)n	Simple_repeat	1	41	(0)	114009
1255	13.1	0.0	0.0	chr1	59016707	59016882	(189939540)	+	AluSx	SINE/Alu	137	312	(0)	114010
33	6.9	2.2	0.0	chr1	66283861	66283906	(182672516)	+	(AG)n	Simple_repeat	1	47	(0)	126990
431	33.6	5.8	6.9	chr1	66283933	66284163	(182672259)	C	L2c	LINE/L2	(0)	3375	3175	126991
265	23.2	11.3	3.4	chr1	74653268	74653356	(174303066)	C	L2a	LINE/L2	(50)	3376	3280	138950
19	21.2	0.0	0.0	chr1	74653362	74653405	(174303017)	+	(TGTG)n	Simple_repeat	1	44	(0)	138951
51	5.9	2.8	0.0	chr1	74653405	74653475	(174302947)	+	(GA)n	Simple_repeat	1	73	(0)	138952
230	25.0	0.0	0.0	chr1	74653555	74653610	(174302812)	C	MIRc	SINE/MIR	(17)	251	196	138953
1713	14.5	3.6	13.6	chr1	87203110	87203484	(161752938)	+	MER44A	DNA/TcMar-Tigger	4	339	(0)	156720
15	30.7	0.0	1.8	chr1	89021718	89021772	(159934650)	+	GA-rich	Low_complexity	1	55	(0)	159391
51	0.0	0.0	0.0	chr1	89021789	89021832	(159934590)	+	(GA)n	Simple_repeat	1	44	(0)	159392
36	16.1	8.0	0.9	chr1	89064138	89064199	(159892223)	+	GA-rich	Low_complexity	1	68	(0)	159451
49	0.0	0.0	0.0	chr1	89064200	89064241	(159892181)	+	(TG)n	Simple_repeat	1	42	(0)	159452
36	16.1	8.0	0.9	chr1	89064242	89064278	(159892144)	+	GA-rich	Low_complexity	69	106	(0)	159453
1606	14.8	0.0	2.7	chr1	92455223	92455478	(156500944)	+	AluJo	SINE/Alu	39	287	(25)	164512
68	3.0	0.0	0.0	chr1	92455481	92455547	(156500875)	+	(AG)n	Simple_repeat	1	67	(0)	164513
1159	23.5	3.7	5.0	chr1	92455548	92455694	(156500728)	C	L1M4	LINE/L1	(2445)	3701	3548	164504
37	0.0	0.0	0.0	chr1	97525759	97525790	(151430632)	+	(AG)n	Simple_repeat	1	32	(0)	172152
30	14.4	0.0	0.0	chr1	97525866	97525913	(151430509)	+	(GT)n	Simple_repeat	1	48	(0)	172153
33	0.0	0.0	0.0	chr1	98053103	98053138	(150903284)	+	(TG)n	Simple_repeat	1	36	(0)	172873
49	5.1	0.0	0.0	chr1	98053138	98053198	(150903224)	+	(GA)n	Simple_repeat	1	61	(0)	172874
104	2.0	1.0	0.0	chr1	101223673	101223773	(147732649)	+	(TC)n	Simple_repeat	1	102	(0)	177714
19	0.0	0.0	0.0	chr1	101223774	101223797	(147732625)	+	(CTC)n	Simple_repeat	1	24	(0)	177715
1555	20.2	5.2	10.4	chr1	101223818	101224249	(147732173)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	177716
2055	11.2	0.0	1.1	chr1	109113108	109113392	(139843030)	+	AluJb	SINE/Alu	1	282	(30)	188008
84	1.3	0.0	0.0	chr1	109113393	109113468	(139842954)	+	(AG)n	Simple_repeat	1	76	(0)	188009
60	5.5	0.0	0.0	chr1	110620034	110620109	(138336313)	+	(GA)n	Simple_repeat	1	76	(0)	190477
17	17.4	0.0	2.9	chr1	147540964	147540998	(101415424)	+	(CT)n	Simple_repeat	1	35	(0)	214257
115	0.0	2.8	0.0	chr1	147541071	147541178	(101415244)	+	(GA)n	Simple_repeat	1	111	(0)	214258
41	6.0	0.0	0.0	chr1	147541179	147541230	(101415192)	+	(TG)n	Simple_repeat	1	52	(0)	214259
109	2.0	0.0	0.0	chr1	148280008	148280109	(100676313)	+	(AG)n	Simple_repeat	1	102	(0)	215420
2431	5.8	0.3	0.7	chr1	148280111	148280405	(100676017)	+	AluSc5	SINE/Alu	6	299	(10)	215421
82	1.4	0.0	0.0	chr1	153690069	153690142	(95266280)	+	(TC)n	Simple_repeat	1	74	(0)	224541
23	0.0	0.0	0.0	chr1	153690143	153690167	(95266255)	+	(CA)n	Simple_repeat	1	25	(0)	224542
24	0.0	0.0	0.0	chr1	156643610	156643635	(92312787)	+	(AC)n	Simple_repeat	1	26	(0)	230515
38	0.0	0.0	0.0	chr1	156643636	156643668	(92312754)	+	(AG)n	Simple_repeat	1	33	(0)	230516
37	0.0	0.0	2.8	chr1	156817048	156817083	(92139339)	+	(TC)n	Simple_repeat	1	36	(0)	230815
288	35.0	2.5	3.7	chr1	157849508	157849670	(91106752)	+	LTR78	LTR/ERV1	868	1028	(276)	232256
14	23.9	4.8	3.0	chr1	157849714	157849760	(91106662)	+	(TTTC)n	Simple_repeat	1	49	(0)	232257
33	5.6	0.0	0.0	chr1	157849761	157849797	(91106625)	+	(TC)n	Simple_repeat	1	37	(0)	232258
14	23.9	4.8	3.0	chr1	157849798	157849812	(91106610)	+	(TTTC)n	Simple_repeat	2	16	(0)	232259
284	33.6	0.7	4.8	chr1	157849837	157849983	(91106439)	+	LTR78	LTR/ERV1	1128	1268	(28)	232256
60	11.9	3.0	0.0	chr1	160767253	160767353	(88189069)	+	(GA)n	Simple_repeat	1	104	(0)	236231
502	26.5	1.9	4.4	chr1	160767385	160767542	(88188880)	+	MIRb	SINE/MIR	85	238	(30)	236232
71	1.6	0.0	0.0	chr1	161097673	161097737	(87858685)	+	(TC)n	Simple_repeat	1	65	(0)	236861
38	4.3	0.0	2.0	chr1	161097738	161097777	(87858645)	+	(TG)n	Simple_repeat	2	41	(0)	236862
346	27.4	11.1	3.0	chr1	161097880	161098011	(87858411)	C	MIR3	SINE/MIR	(63)	145	2	236863
921	32.7	13.1	7.0	chr1	161736122	161736419	(87220003)	+	LTR78	LTR/ERV1	529	826	(478)	238009
37	2.9	0.0	0.0	chr1	161736529	161736564	(87219858)	+	(GA)n	Simple_repeat	1	36	(0)	238011
369	28.2	3.7	0.8	chr1	161736625	161736756	(87219666)	+	LTR78	LTR/ERV1	1031	1166	(138)	238009
66	1.7	0.0	0.0	chr1	170689815	170689875	(78266547)	+	(TC)n	Simple_repeat	1	61	(0)	251640
27	6.0	0.0	0.0	chr1	170689876	170689910	(78266512)	+	(GT)n	Simple_repeat	1	35	(0)	251641
22	10.1	0.0	0.0	chr1	172354081	172354112	(76602310)	+	(GT)n	Simple_repeat	1	32	(0)	254124
35	0.0	0.0	0.0	chr1	172354113	172354142	(76602280)	+	(GA)n	Simple_repeat	1	30	(0)	254125
1437	17.6	3.7	1.2	chr1	172354221	172354517	(76601905)	C	MER61B	LTR/ERV1	(35)	392	1	254126
17	16.9	1.9	5.7	chr1	173714998	173715049	(75241373)	+	GA-rich	Low_complexity	1	53	(0)	255989
109	0.0	6.0	0.0	chr1	181023029	181023145	(67933277)	+	(TC)n	Simple_repeat	1	124	(0)	267309
1197	23.3	10.4	2.2	chr1	184786692	184786897	(64169525)	+	MLT1H	LTR/ERVL-MaLR	1	234	(315)	273227
46	0.0	0.0	0.0	chr1	184786898	184786936	(64169486)	+	(TC)n	Simple_repeat	1	39	(0)	273228
1197	23.3	10.4	2.2	chr1	184786937	184787053	(64169369)	+	MLT1H	LTR/ERVL-MaLR	235	354	(195)	273227
23	7.0	0.0	0.0	chr1	184867141	184867170	(64089252)	+	(CT)n	Simple_repeat	1	30	(0)	273356
30	5.0	2.3	2.3	chr1	184867171	184867213	(64089209)	+	(CA)n	Simple_repeat	1	44	(0)	273357
2240	16.8	4.3	0.2	chr1	199529317	199529519	(49426903)	+	MSTB1	LTR/ERVL-MaLR	3	220	(212)	292626
59	1.8	0.0	0.0	chr1	199529520	199529574	(49426848)	+	(CT)n	Simple_repeat	1	55	(0)	292627
2240	16.8	4.3	0.2	chr1	199529575	199529770	(49426652)	+	MSTB1	LTR/ERVL-MaLR	221	418	(14)	292626
40	4.8	0.0	0.0	chr1	208086938	208086980	(40869442)	+	(TC)n	Simple_repeat	1	43	(0)	307578
44	9.7	0.0	0.0	chr1	208086991	208087056	(40869366)	+	(GAGA)n	Simple_repeat	1	66	(0)	307579
46	2.3	0.0	0.0	chr1	209674668	209674711	(39281711)	+	(TC)n	Simple_repeat	1	44	(0)	310026
25	0.0	0.0	0.0	chr1	209674712	209674739	(39281683)	+	(AC)n	Simple_repeat	1	28	(0)	310027
634	28.3	4.9	1.7	chr1	210883516	210883744	(38072678)	+	MIR	SINE/MIR	28	267	(1)	311832
44	0.0	0.0	0.0	chr1	226711406	226711443	(22244979)	+	(AG)n	Simple_repeat	1	38	(0)	336323
26	3.0	2.9	0.0	chr1	226711444	226711477	(22244945)	+	(TG)n	Simple_repeat	1	35	(0)	336324
101	3.1	0.0	0.0	chr1	226944693	226944791	(22011631)	+	(GA)n	Simple_repeat	1	99	(0)	336734
60	0.0	0.0	0.0	chr1	229435462	229435512	(19520910)	+	(CT)n	Simple_repeat	1	51	(0)	340258
24	6.1	2.9	0.0	chr1	234368521	234368554	(14587868)	+	(AG)n	Simple_repeat	1	35	(0)	347755
19	0.0	0.0	0.0	chr1	234523923	234523943	(14432479)	+	(TG)n	Simple_repeat	1	21	(0)	348028
37	0.0	0.0	0.0	chr1	234523943	234523983	(14432439)	+	(TA)n	Simple_repeat	1	41	(0)	348029
53	0.0	0.0	0.0	chr1	234523984	234524028	(14432394)	+	(AG)n	Simple_repeat	1	45	(0)	348030
792	27.9	14.7	6.9	chr1	238153384	238153670	(10802752)	C	LTR40A1	LTR/ERVL	(0)	584	285	354285
61	0.0	0.0	0.0	chr1	238153671	238153722	(10802700)	+	(TC)n	Simple_repeat	1	52	(0)	354286
792	27.9	14.7	6.9	chr1	238153723	238153969	(10802453)	C	LTR40A1	LTR/ERVL	(300)	284	1	354285
25	17.5	0.0	0.0	chr1	241552145	241552204	(7404218)	+	GA-rich	Low_complexity	1	60	(0)	359452
523	22.9	11.1	1.3	chr1	243855661	243855815	(5100607)	C	MER45A	DNA/hAT-Tip100	(0)	178	7	363183
411	30.6	19.1	5.9	chr1	243855962	243856486	(5099936)	C	LTR78	LTR/ERV1	(691)	613	3	363182
5185	22.6	8.4	5.7	chr1	248793560	248794164	(162258)	+	L1M4b	LINE/L1	851	1455	(5412)	370807
1765	20.9	5.3	1.0	chr1	248794165	248794210	(162212)	C	MLT2D	LTR/ERVL	(0)	414	369	370812
37	2.8	0.0	0.0	chr1	248794211	248794246	(162176)	+	(AG)n	Simple_repeat	1	36	(0)	370813
1765	20.9	5.3	1.0	chr1	248794247	248794595	(161827)	C	MLT2D	LTR/ERVL	(46)	368	1	370812
1984	14.8	0.0	0.3	chr10	18358105	18358387	(115439035)	C	AluSz	SINE/Alu	(30)	282	1	398956
336	31.1	6.2	0.0	chr10	18358389	18358494	(115438928)	C	L2a	LINE/L2	(0)	3426	3314	398957
82	1.4	0.0	0.0	chr10	18358498	18358571	(115438851)	+	(CT)n	Simple_repeat	1	74	(0)	398958
18	29.4	0.0	0.0	chr10	29509276	29509329	(104288093)	+	G-rich	Low_complexity	1	54	(0)	416989
59	0.0	0.0	0.0	chr10	29509331	29509380	(104288042)	+	(GA)n	Simple_repeat	1	50	(0)	416990
1119	25.4	11.8	2.4	chr10	29772517	29772928	(104024494)	C	LTR16D1	LTR/ERVL	(16)	659	204	417427
62	4.7	0.0	0.0	chr10	29772945	29773010	(104024412)	+	(GA)n	Simple_repeat	1	66	(0)	417428
44	4.4	0.0	0.0	chr10	30544107	30544153	(103253269)	+	(TC)n	Simple_repeat	1	47	(0)	418939
1927	9.9	4.6	1.5	chr10	30544156	30544456	(103252966)	C	AluSz	SINE/Alu	(0)	312	1	418940
33	0.0	0.0	0.0	chr10	44008352	44008379	(89789043)	+	(TC)n	Simple_repeat	1	28	(0)	434386
1626	20.7	4.3	3.5	chr10	48301369	48301548	(85495874)	+	MLT1A	LTR/ERVL-MaLR	1	175	(199)	440370
60	4.7	0.0	0.0	chr10	48301549	48301615	(85495807)	+	(CTCTCT)n	Simple_repeat	1	67	(0)	440371
1626	20.7	4.3	3.5	chr10	48301616	48301805	(85495617)	+	MLT1A	LTR/ERVL-MaLR	176	374	(0)	440370
33	2.6	0.0	0.0	chr10	52595504	52595542	(81201880)	+	(GT)n	Simple_repeat	1	39	(0)	446494
42	5.8	0.0	0.0	chr10	52595542	52595595	(81201827)	+	(GA)n	Simple_repeat	1	54	(0)	446495
58	1.9	0.0	0.0	chr10	59058649	59058702	(74738720)	+	(TC)n	Simple_repeat	1	54	(0)	455001
72	1.5	1.4	0.0	chr10	61623835	61623903	(72173519)	+	(TC)n	Simple_repeat	1	70	(0)	458827
69	0.0	0.0	0.0	chr10	70133099	70133157	(63664265)	+	(AG)n	Simple_repeat	1	59	(0)	472808
1544	19.2	8.0	8.7	chr10	89293495	89293674	(44503748)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	191	504163
43	0.0	0.0	2.4	chr10	89293675	89293715	(44503707)	+	(GA)n	Simple_repeat	1	41	(0)	504164
1544	19.2	8.0	8.7	chr10	89293716	89293927	(44503495)	C	MLT1B	LTR/ERVL-MaLR	(200)	190	2	504163
28	0.0	0.0	0.0	chr10	93702523	93702548	(40094874)	+	(CCG)n	Simple_repeat	1	26	(0)	511624
2943	20.3	8.7	0.8	chr10	98777998	98778253	(35019169)	C	MER54A	LTR/ERVL	(259)	642	378	520466
46	2.3	0.0	0.0	chr10	98778254	98778297	(35019125)	+	(GA)n	Simple_repeat	1	44	(0)	520467
2943	18.3	8.7	0.0	chr10	98778298	98778690	(35018732)	C	MER54A	LTR/ERVL	(467)	434	2	520466
37	0.0	0.0	0.0	chr10	100371705	100371736	(33425686)	+	(GA)n	Simple_repeat	1	32	(0)	523224
910	10.7	0.0	0.8	chr10	100371786	100371907	(33425515)	C	AluJo	SINE/Alu	(190)	122	2	523225
328	30.9	4.6	5.7	chr10	108894289	108894463	(24902959)	+	MIRb	SINE/MIR	45	217	(51)	537212
48	6.4	1.5	1.5	chr10	108894579	108894645	(24902777)	+	(CT)n	Simple_repeat	1	68	(0)	537213
422	20.4	7.4	0.0	chr10	108894688	108894775	(24902647)	C	MLT1I	LTR/ERVL-MaLR	(12)	399	305	537214
105	1.0	1.0	0.0	chr10	113117366	113117462	(20679960)	+	(TC)n	Simple_repeat	1	98	(0)	543808
1576	19.8	4.0	0.3	chr11	9675016	9675308	(125411314)	+	AluJo	SINE/Alu	1	304	(8)	586325
111	3.7	0.0	0.0	chr11	9675310	9675421	(125411201)	+	(AG)n	Simple_repeat	1	112	(0)	586326
19	10.8	2.3	4.4	chr11	9675422	9675465	(125411157)	+	GA-rich	Low_complexity	1	45	(0)	586327
18	7.0	6.7	0.0	chr11	9675559	9675588	(125411034)	+	(TA)n	Simple_repeat	1	32	(0)	586328
16426	15.5	3.0	2.6	chr11	10431635	10435599	(124651023)	+	L1MB7	LINE/L1	2185	6165	(19)	587549
238	22.2	8.0	5.8	chr11	18015145	18015230	(117071392)	+	LTR78	LTR/ERV1	1012	1099	(205)	599740
18	0.0	0.0	0.0	chr11	18015232	18015251	(117071371)	+	(AG)n	Simple_repeat	1	20	(0)	599741
22	0.0	0.0	0.0	chr11	18015251	18015274	(117071348)	+	(GT)n	Simple_repeat	1	24	(0)	599742
54	0.0	0.0	0.0	chr11	18015275	18015320	(117071302)	+	(GA)n	Simple_repeat	1	46	(0)	599743
385	21.8	6.6	5.3	chr11	18015339	18015488	(117071134)	+	LTR78	LTR/ERV1	1127	1278	(26)	599740
1919	13.5	8.4	4.1	chr11	22619749	22619941	(112466681)	+	THE1D	LTR/ERVL-MaLR	1	210	(171)	607228
33	0.0	0.0	0.0	chr11	22619942	22619969	(112466653)	+	(TC)n	Simple_repeat	1	28	(0)	607229
1919	13.5	8.4	4.1	chr11	22619970	22620139	(112466483)	+	THE1D	LTR/ERVL-MaLR	211	380	(1)	607228
16	20.0	4.3	0.0	chr11	25265020	25265065	(109821557)	+	(TCTTTC)n	Simple_repeat	1	48	(0)	610842
65	11.9	1.0	0.0	chr11	25265187	25265287	(109821335)	+	(TC)n	Simple_repeat	1	102	(0)	610843
19	10.4	0.0	0.0	chr11	46120986	46121016	(88965606)	+	(GAG)n	Simple_repeat	1	31	(0)	643311
21	8.9	2.8	0.0	chr11	46121048	46121083	(88965539)	+	(GCT)n	Simple_repeat	1	37	(0)	643312
13	5.0	0.0	4.3	chr11	46121133	46121155	(88965467)	+	(CCT)n	Simple_repeat	1	23	(0)	643313
37	4.3	4.2	0.0	chr11	46121156	46121203	(88965419)	+	(CT)n	Simple_repeat	1	50	(0)	643314
16	21.7	0.0	0.0	chr11	46121236	46121267	(88965355)	+	G-rich	Low_complexity	1	32	(0)	643315
18	8.7	7.4	5.2	chr11	62653254	62653307	(72433315)	+	(GAGCGC)n	Simple_repeat	1	58	(0)	662481
1936	8.1	6.5	0.0	chr11	62653500	62653758	(72432864)	+	AluSx	SINE/Alu	1	277	(35)	662482
91	0.0	0.0	0.0	chr11	62653777	62653853	(72432769)	+	(AG)n	Simple_repeat	1	77	(0)	662483
2914	0.3	0.0	0.0	chr11	62653926	62654236	(72432386)	C	AluYb8	SINE/Alu	(7)	311	1	662484
3263	24.0	7.7	14.7	chr11	63735291	63735539	(71351083)	+	L1MEf	LINE/L1	4362	4608	(1538)	664258
60	0.0	0.0	0.0	chr11	63735551	63735601	(71351021)	+	(TC)n	Simple_repeat	1	51	(0)	664278
1242	22.6	0.0	0.0	chr11	63735608	63735824	(71350798)	C	AluSz	SINE/Alu	(90)	222	6	664279
255	21.9	5.0	9.4	chr11	64704497	64704602	(70382020)	+	Tigger15a	DNA/TcMar-Tigger	144	244	(471)	666069
19	0.0	0.0	0.0	chr11	64704603	64704623	(70381999)	+	(CA)n	Simple_repeat	1	21	(0)	666070
57	0.0	0.0	0.0	chr11	64704624	64704672	(70381950)	+	(AG)n	Simple_repeat	1	49	(0)	666071
813	27.8	6.5	2.6	chr11	64704673	64704982	(70381640)	+	Tigger15a	DNA/TcMar-Tigger	317	639	(76)	666072
196	21.9	18.8	0.0	chr11	72725057	72725138	(62361484)	C	MIR3	SINE/MIR	(74)	134	34	680464
37	5.1	0.0	0.0	chr11	72725296	72725336	(62361286)	+	(CT)n	Simple_repeat	1	41	(0)	680465
8110	20.4	7.4	6.9	chr11	82680539	82682499	(52404123)	C	HUERS-P3b-int	LTR/ERV1	(4776)	2642	664	699274
32	3.2	0.0	0.0	chr11	82682500	82682531	(52404091)	+	(GA)n	Simple_repeat	1	32	(0)	699275
8110	20.4	7.1	7.0	chr11	82682532	82682809	(52403813)	C	HUERS-P3b-int	LTR/ERV1	(6755)	663	409	699274
152	7.2	5.1	0.0	chr11	89177007	89177241	(45909381)	+	(GA)n	Simple_repeat	1	247	(0)	709647
61	0.0	0.0	0.0	chr11	107864237	107864288	(27222334)	+	(TC)n	Simple_repeat	1	52	(0)	735702
289	25.0	0.8	18.4	chr11	107864310	107864456	(27222166)	C	MLT1G1	LTR/ERVL-MaLR	(299)	292	172	735701
31	26.9	2.6	0.8	chr11	113699157	113699211	(21387411)	+	(TCTGTC)n	Simple_repeat	1	58	(0)	745013
104	2.1	0.0	0.0	chr11	113699212	113699308	(21387314)	+	(TC)n	Simple_repeat	1	97	(0)	745014
31	26.9	2.6	0.8	chr11	113699309	113699366	(21387256)	+	(TCTGTC)n	Simple_repeat	5	61	(0)	745015
36	0.0	0.0	0.0	chr11	123383206	123383236	(11703386)	+	(CT)n	Simple_repeat	1	31	(0)	761424
584	29.2	2.2	2.4	chr11	123383296	123383567	(11703055)	+	MIRb	SINE/MIR	7	262	(0)	761425
5500	23.0	5.5	7.0	chr11	128413106	128414441	(6672181)	+	LTR37-int	LTR/ERV1	1	1328	(2732)	768899
78	4.9	0.0	0.0	chr11	128414442	128414525	(6672097)	+	(AG)n	Simple_repeat	1	84	(0)	768900
5500	23.0	5.5	7.0	chr11	128414526	128415281	(6671341)	+	LTR37-int	LTR/ERV1	1329	2059	(2001)	768899
61	0.0	0.0	0.0	chr11	128693942	128693993	(6392629)	+	(GA)n	Simple_repeat	1	52	(0)	769253
14	17.5	0.0	0.0	chr11	128891282	128891313	(6195309)	+	(CCCCG)n	Simple_repeat	1	32	(0)	769533
40	5.3	4.9	0.0	chr11	128891365	128891397	(6195225)	+	(GA)n	Simple_repeat	1	34	(0)	769534
53	0.0	0.0	0.0	chr11	128891398	128891442	(6195180)	+	(AC)n	Simple_repeat	1	45	(0)	769535
40	5.3	4.9	0.0	chr11	128891443	128891476	(6195146)	+	(GA)n	Simple_repeat	2	35	(0)	769536
18	10.7	0.0	3.0	chr11	131890111	131890127	(3196495)	+	(CA)n	Simple_repeat	1	16	(0)	773962
63	4.6	0.0	0.0	chr11	131890128	131890194	(3196428)	+	(CT)n	Simple_repeat	1	67	(0)	773963
18	10.7	0.0	3.0	chr11	131890195	131890209	(3196413)	+	(CA)n	Simple_repeat	1	15	(0)	773964
48	0.0	0.0	0.0	chr11	132278744	132278784	(2807838)	+	(TC)n	Simple_repeat	1	41	(0)	774456
253	36.5	7.6	6.6	chr11	132278828	132279414	(2807208)	+	L2c	LINE/L2	2251	2843	(576)	774457
376	29.8	14.7	1.9	chr11	133544525	133544791	(1541831)	+	MER102b	DNA/hAT-Charlie	1	307	(34)	776071
59	0.0	0.0	0.0	chr11	133544827	133544876	(1541746)	+	(TC)n	Simple_repeat	1	50	(0)	776072
37	0.0	0.0	0.0	chr11	133947709	133947740	(1138882)	+	(TC)n	Simple_repeat	1	32	(0)	776554
60	29.1	3.0	3.6	chr11	133947746	133948042	(1138580)	+	(TCTG)n	Simple_repeat	1	306	(0)	776555
370	32.1	6.0	2.4	chr12	1007026	1007317	(132267992)	C	L2c	LINE/L2	(33)	3354	2803	779907
54	8.0	1.2	1.2	chr12	1007461	1007541	(132267768)	+	(TC)n	Simple_repeat	1	82	(0)	779908
25	0.0	0.0	0.0	chr12	1007542	1007569	(132267740)	+	(GT)n	Simple_repeat	1	28	(0)	779909
31	0.0	0.0	0.0	chr12	1924796	1924829	(131350480)	+	(GT)n	Simple_repeat	1	34	(0)	781437
50	2.2	0.0	0.0	chr12	1924830	1924876	(131350433)	+	(GA)n	Simple_repeat	1	47	(0)	781438
31	0.0	0.0	0.0	chr12	38867306	38867339	(94407970)	+	(GT)n	Simple_repeat	1	34	(0)	831639
51	2.1	0.0	0.0	chr12	38867340	38867387	(94407922)	+	(GA)n	Simple_repeat	1	48	(0)	831640
86	8.4	9.2	0.0	chr12	46125342	46125505	(87149804)	+	GA-rich	Low_complexity	1	179	(0)	841856
41	16.1	0.0	0.0	chr12	49222708	49222777	(84052532)	+	GA-rich	Low_complexity	1	70	(0)	846714
100	16.8	3.6	1.7	chr12	50135086	50135308	(83140001)	+	GA-rich	Low_complexity	1	231	(0)	848486
49	0.0	0.0	0.0	chr12	50135309	50135350	(83139959)	+	(GT)n	Simple_repeat	1	42	(0)	848487
571	31.2	16.9	1.5	chr12	62702137	62702544	(70572765)	C	L3	LINE/CR1	(2737)	1362	870	868345
43	0.0	0.0	0.0	chr12	62702545	62702581	(70572728)	+	(AG)n	Simple_repeat	1	37	(0)	868352
571	31.2	16.9	1.5	chr12	62702582	62702640	(70572669)	C	L3	LINE/CR1	(3230)	869	809	868345
67	0.0	1.6	0.0	chr12	65824709	65824769	(67450540)	+	(TC)n	Simple_repeat	1	62	(0)	873413
415	29.4	3.4	13.0	chr12	66589021	66589162	(66686147)	+	MIRb	SINE/MIR	123	258	(10)	874590
51	5.5	0.0	0.0	chr12	66589195	66589251	(66686058)	+	(TC)n	Simple_repeat	1	57	(0)	874592
896	20.0	0.7	0.0	chr12	71698458	71698602	(61576707)	+	AluJr	SINE/Alu	137	282	(30)	882695
62	0.0	0.0	0.0	chr12	71698608	71698660	(61576649)	+	(AG)n	Simple_repeat	1	53	(0)	882696
219	13.9	2.7	0.0	chr12	71698662	71698697	(61576612)	C	MIR	SINE/MIR	(192)	70	34	882697
1454	29.1	4.6	2.8	chr12	73476026	73476534	(59798775)	+	LTR40a	LTR/ERVL	1	519	(0)	885027
333	22.5	9.2	2.3	chr12	89658436	89658567	(43616742)	+	LTR79	LTR/ERVL	322	463	(64)	907390
60	1.8	0.0	0.0	chr12	89658599	89658654	(43616655)	+	(GA)n	Simple_repeat	1	56	(0)	907391
603	29.9	7.7	1.4	chr12	93185497	93185703	(40089606)	C	MIRb	SINE/MIR	(29)	239	19	912899
20	0.0	0.0	0.0	chr12	93185724	93185745	(40089564)	+	(GT)n	Simple_repeat	1	22	(0)	912900
37	0.0	0.0	0.0	chr12	93185746	93185777	(40089532)	+	(GA)n	Simple_repeat	1	32	(0)	912901
186	30.8	15.2	0.8	chr12	93185795	93185912	(40089397)	C	L3	LINE/CR1	(1516)	2583	2446	912902
1646	12.8	0.0	1.3	chr12	94764006	94764240	(38511069)	+	AluSx1	SINE/Alu	48	279	(33)	915789
88	1.2	1.1	1.1	chr12	94764242	94764328	(38510981)	+	(GA)n	Simple_repeat	1	88	(0)	915790
48	0.0	0.0	0.0	chr12	97463018	97463058	(35812251)	+	(TC)n	Simple_repeat	1	41	(0)	920751
29	14.0	0.0	0.0	chr12	97463062	97463108	(35812201)	+	(AC)n	Simple_repeat	1	47	(0)	920752
2742	12.7	1.9	1.7	chr12	100108635	100108988	(33166321)	+	L1MA3	LINE/L1	5731	6068	(237)	924882
1579	13.7	15.5	2.1	chr12	100108989	100109159	(33166150)	+	THE1D	LTR/ERVL-MaLR	1	188	(193)	924883
65	0.0	0.0	0.0	chr12	100109160	100109214	(33166095)	+	(CT)n	Simple_repeat	1	55	(0)	924884
1579	13.7	15.5	2.1	chr12	100109215	100109371	(33165938)	+	THE1D	LTR/ERVL-MaLR	189	380	(1)	924883
437	27.5	7.1	0.0	chr12	102476143	102476313	(30798996)	+	Tigger14a	DNA/TcMar-Tigger	112	295	(29)	929084
40	0.0	0.0	0.0	chr12	102476411	102476444	(30798865)	+	(GA)n	Simple_repeat	1	34	(0)	929085
12	22.4	0.0	2.6	chr12	102476477	102476514	(30798795)	+	(ACAGAA)n	Simple_repeat	1	38	(0)	929086
4679	17.3	1.5	2.1	chr12	108119254	108119544	(25155765)	+	MER54B	LTR/ERVL	1	302	(491)	939504
29	0.0	0.0	0.0	chr12	108119545	108119569	(25155740)	+	(TC)n	Simple_repeat	1	25	(0)	939505
4679	17.3	1.5	2.1	chr12	108119570	108120075	(25155234)	+	MER54B	LTR/ERVL	303	792	(1)	939504
16	17.1	0.0	0.0	chr12	109052622	109052654	(24222655)	+	(CGG)n	Simple_repeat	1	33	(0)	941640
797	27.4	8.7	1.3	chr12	110092830	110093073	(23182236)	+	MIRb	SINE/MIR	4	264	(4)	943999
55	8.7	0.0	0.0	chr12	110093116	110093190	(23182119)	+	(AG)n	Simple_repeat	1	75	(0)	944000
749	18.8	12.3	11.1	chr12	110093253	110093428	(23181881)	+	MER20	DNA/hAT-Charlie	1	186	(33)	944001
162	5.6	0.0	0.0	chr12	110387229	110387432	(22887877)	+	(GA)n	Simple_repeat	1	204	(0)	944606
16	0.0	0.0	0.0	chr12	110387446	110387462	(22887847)	+	(A)n	Simple_repeat	1	17	(0)	944607
39	2.3	0.0	0.0	chr12	116120433	116120477	(17154832)	+	(TC)n	Simple_repeat	1	45	(0)	957387
51	0.0	0.0	0.0	chr12	116120478	116120521	(17154788)	+	(CA)n	Simple_repeat	1	44	(0)	957388
258	18.4	0.0	6.0	chr12	116124078	116124193	(17151116)	+	HERVIP10FH-int	LTR/ERV1	778	886	(4216)	957390
2165	9.1	0.0	0.0	chr12	121128481	121128754	(12146555)	+	AluSx	SINE/Alu	1	274	(38)	968634
515	17.9	10.4	18.2	chr12	121128755	121128917	(12146392)	C	LTR16C	LTR/ERVL	(150)	339	198	968633
37	25.0	2.1	0.0	chr12	121128943	121129035	(12146274)	+	(TC)n	Simple_repeat	1	95	(0)	968635
516	27.9	11.5	6.7	chr12	121129037	121129482	(12145827)	+	MLT1O	LTR/ERVL-MaLR	53	522	(20)	968636
140	15.9	2.6	0.0	chr12	128841238	128841502	(4433807)	+	(TC)n	Simple_repeat	1	272	(0)	983969
20	0.0	0.0	0.0	chr12	128841502	128841523	(4433786)	+	(CA)n	Simple_repeat	1	22	(0)	983970
3019	18.1	2.5	7.7	chr13	23523426	23523558	(90840770)	+	L1MC3	LINE/L1	7663	7763	(22)	998977
50	2.2	0.0	0.0	chr13	23523591	23523637	(90840691)	+	(AG)n	Simple_repeat	1	47	(0)	998979
49	2.0	2.0	0.0	chr13	27981009	27981058	(86383270)	+	(TC)n	Simple_repeat	1	51	(0)	1005842
248	34.9	3.6	8.8	chr13	42882616	42882819	(71481509)	+	L2	LINE/L2	2659	2851	(568)	1028049
35	0.0	0.0	0.0	chr13	42882911	42882940	(71481388)	+	(CT)n	Simple_repeat	1	30	(0)	1028050
25	0.0	0.0	0.0	chr13	42882941	42882968	(71481360)	+	(GT)n	Simple_repeat	1	28	(0)	1028051
236	23.8	2.3	5.6	chr13	42882987	42883075	(71481253)	+	L2a	LINE/L2	3332	3417	(9)	1028052
849	16.2	13.9	3.1	chr13	45109189	45109411	(69254917)	+	MER92C	LTR/ERV1	316	566	(24)	1031603
616	24.4	6.2	4.8	chr13	45109414	45109620	(69254708)	C	MLT1F1	LTR/ERVL-MaLR	(356)	213	4	1031604
4422	26.5	9.5	4.4	chr13	46199860	46200750	(68163578)	C	L2a	LINE/L2	(1155)	2264	1351	1033504
2610	28.1	13.0	5.3	chr13	48492016	48493225	(65871103)	+	L2a	LINE/L2	1348	2747	(672)	1036897
41	0.0	0.0	0.0	chr13	48493226	48493260	(65871068)	+	(CA)n	Simple_repeat	1	35	(0)	1036898
2610	28.1	13.0	5.3	chr13	48493261	48493315	(65871013)	+	L2a	LINE/L2	2748	2758	(661)	1036897
48	3.6	3.5	0.0	chr13	48493316	48493372	(65870956)	+	(CT)n	Simple_repeat	1	59	(0)	1036899
2610	25.3	11.6	3.4	chr13	48493373	48493962	(65870366)	+	L2a	LINE/L2	2759	3426	(0)	1036897
742	19.8	7.0	0.7	chr13	48785778	48785943	(65578385)	+	MLT1B	LTR/ERVL-MaLR	1	174	(200)	1037328
59	0.0	0.0	0.0	chr13	48785944	48785993	(65578335)	+	(TC)n	Simple_repeat	1	50	(0)	1037329
718	24.6	5.4	1.7	chr13	48785994	48786004	(65578324)	+	MLT1B	LTR/ERVL-MaLR	175	185	(189)	1037328
58	1.9	0.0	0.0	chr13	71041639	71041692	(43322636)	+	(GA)n	Simple_repeat	1	54	(0)	1066949
54	0.0	0.0	0.0	chr13	74287350	74287395	(40076933)	+	(GA)n	Simple_repeat	1	46	(0)	1071768
1863	20.9	3.0	10.9	chr13	113557924	113558466	(805862)	+	MER54B	LTR/ERVL	295	793	(0)	1124855
26	0.0	0.0	0.0	chr14	20816758	20816782	(86226936)	+	(T)n	Simple_repeat	1	25	(0)	1128654
75	28.6	2.4	2.6	chr14	20816783	20816902	(86226816)	+	GA-rich	Low_complexity	1	120	(0)	1128655
46	0.0	0.0	0.0	chr14	20816903	20816941	(86226777)	+	(AG)n	Simple_repeat	1	39	(0)	1128656
30	0.0	0.0	0.0	chr14	20816947	20816972	(86226746)	+	(AC)n	Simple_repeat	1	26	(0)	1128657
75	28.6	2.4	2.6	chr14	20816973	20817142	(86226576)	+	GA-rich	Low_complexity	126	295	(0)	1128658
40	0.0	2.6	0.0	chr14	22457169	22457206	(84586512)	+	(TC)n	Simple_repeat	1	39	(0)	1131204
61	0.0	0.0	0.0	chr14	23928142	23928193	(83115525)	+	(TC)n	Simple_repeat	1	52	(0)	1133550
57	5.8	0.0	0.0	chr14	32938453	32938524	(74105194)	+	(GA)n	Simple_repeat	1	72	(0)	1145777
37	16.7	3.4	1.9	chr14	54489439	54489579	(52554139)	+	(TC)n	Simple_repeat	1	143	(0)	1175998
1992	13.8	0.7	1.1	chr14	54489580	54489854	(52553864)	C	AluJr	SINE/Alu	(38)	274	1	1175999
358	21.4	0.0	3.3	chr14	60331179	60331270	(46712448)	C	MER20B	DNA/hAT-Charlie	(639)	144	56	1184900
17	0.0	0.0	0.0	chr14	60331296	60331313	(46712405)	+	(CA)n	Simple_repeat	1	18	(0)	1184901
30	0.0	0.0	0.0	chr14	60331314	60331339	(46712379)	+	(CT)n	Simple_repeat	1	26	(0)	1184902
37	4.5	0.0	4.0	chr14	62078107	62078156	(44965562)	+	(CT)n	Simple_repeat	1	50	(0)	1187492
18	18.9	0.0	0.0	chr14	62078157	62078172	(44965546)	+	(AT)n	Simple_repeat	1	16	(0)	1187493
29	0.0	0.0	0.0	chr14	62078173	62078197	(44965521)	+	(AC)n	Simple_repeat	1	25	(0)	1187494
18	18.9	0.0	0.0	chr14	62078198	62078217	(44965501)	+	(AT)n	Simple_repeat	1	20	(0)	1187495
48	0.0	0.0	0.0	chr14	68156456	68156496	(38887222)	+	(TC)n	Simple_repeat	1	41	(0)	1197302
41	6.4	0.0	0.0	chr14	68342552	68342600	(38701118)	+	(TC)n	Simple_repeat	1	49	(0)	1197563
2244	14.0	2.8	11.2	chr14	70880851	70881045	(36162673)	C	MSTB	LTR/ERVL-MaLR	(237)	189	1	1201913
939	17.8	7.3	1.5	chr14	70881046	70881099	(36162619)	+	MLT1B	LTR/ERVL-MaLR	134	203	(187)	1201912
72	1.5	0.0	0.0	chr14	70881100	70881165	(36162553)	+	(TC)n	Simple_repeat	1	66	(0)	1201915
939	17.8	7.3	1.5	chr14	70881166	70881315	(36162403)	+	MLT1B	LTR/ERVL-MaLR	204	351	(39)	1201912
53	4.6	0.0	0.0	chr14	74244862	74244881	(32798837)	+	(GA)n	Simple_repeat	1	20	(0)	1208096
66	10.6	0.0	0.0	chr14	74244882	74244982	(32798736)	+	(GT)n	Simple_repeat	1	101	(0)	1208097
53	4.6	0.0	0.0	chr14	74244983	74245029	(32798689)	+	(GA)n	Simple_repeat	1	47	(0)	1208098
153	0.5	5.6	0.0	chr14	76564713	76564908	(30478810)	+	(AG)n	Simple_repeat	1	207	(0)	1212480
135	1.6	0.8	0.0	chr14	77269669	77269795	(29773923)	+	(TC)n	Simple_repeat	1	128	(0)	1213918
25	0.0	0.0	0.0	chr14	77269796	77269822	(29773896)	+	(C)n	Simple_repeat	1	27	(0)	1213919
529	28.8	2.5	2.5	chr14	77269823	77269979	(29773739)	C	MIR	SINE/MIR	(43)	219	63	1213920
555	19.2	16.6	0.7	chr14	91108241	91108387	(15935331)	C	MER96B	DNA/hAT-Tip100	(241)	176	2	1235064
47	0.0	0.0	0.0	chr14	91108488	91108527	(15935191)	+	(TG)n	Simple_repeat	1	40	(0)	1235065
26	0.0	0.0	0.0	chr14	91108528	91108556	(15935162)	+	(AG)n	Simple_repeat	1	29	(0)	1235066
2023	13.5	0.4	0.0	chr14	91108557	91108837	(15934881)	C	AluSx	SINE/Alu	(30)	282	1	1235067
53	3.6	1.7	0.0	chr14	98137840	98137897	(8905821)	+	(CT)n	Simple_repeat	1	59	(0)	1247860
66	4.9	1.2	0.0	chr14	100617400	100617484	(6426234)	+	(GA)n	Simple_repeat	1	86	(0)	1252154
61	0.0	0.0	0.0	chr15	34515281	34515332	(67475857)	+	(CT)n	Simple_repeat	1	52	(0)	1282968
38	0.0	0.0	0.0	chr15	34515333	34515374	(67475815)	+	(GT)n	Simple_repeat	1	42	(0)	1282969
56	7.1	0.0	0.0	chr15	35016395	35016468	(66974721)	+	(GA)n	Simple_repeat	1	74	(0)	1283790
54	0.0	0.0	0.0	chr15	37098380	37098425	(64892764)	+	(GA)n	Simple_repeat	1	46	(0)	1286503
46	18.7	0.0	0.0	chr15	37100238	37100328	(64890861)	+	(TCTC)n	Simple_repeat	1	91	(0)	1286510
346	32.1	6.4	0.6	chr15	38174168	38174330	(63816859)	C	HAL1ME	LINE/L1	(164)	2301	2129	1287859
15	0.0	0.0	0.0	chr15	38251507	38251523	(63739666)	+	(TC)n	Simple_repeat	1	17	(0)	1288010
38	2.8	0.0	0.0	chr15	38251524	38251560	(63739629)	+	(CA)n	Simple_repeat	1	37	(0)	1288011
15	19.7	4.2	2.0	chr15	38453931	38453978	(63537211)	+	(TTA)n	Simple_repeat	1	50	(0)	1288351
30	0.0	0.0	0.0	chr15	49422121	49422146	(52569043)	+	(AG)n	Simple_repeat	1	26	(0)	1306211
18	31.6	0.0	0.0	chr15	49422147	49422193	(52568996)	+	(TG)n	Simple_repeat	1	47	(0)	1306212
36	0.0	0.0	0.0	chr15	60398994	60399024	(41592165)	+	(GA)n	Simple_repeat	1	31	(0)	1323708
253	23.5	0.0	2.9	chr15	60399038	60399107	(41592082)	C	HERVFH21-int	LTR/ERV1	(6452)	77	10	1323709
1662	17.5	3.5	0.0	chr15	63547448	63547721	(38443468)	+	AluJo	SINE/Alu	1	284	(28)	1328774
122	11.7	0.0	0.0	chr15	63547723	63547908	(38443281)	+	(AGAG)n	Simple_repeat	1	186	(0)	1328775
336	7.5	0.0	0.0	chr15	63547916	63547955	(38443234)	+	AluYh3	SINE/Alu	12	51	(260)	1328776
1096	15.1	1.1	3.8	chr15	63547962	63548147	(38443042)	+	AluSx3	SINE/Alu	131	311	(0)	1328777
240	27.8	0.0	1.4	chr15	66150677	66150749	(35840440)	C	MIR3	SINE/MIR	(6)	202	131	1334068
366	20.6	0.0	1.4	chr15	66150751	66150823	(35840366)	+	AluJr4	SINE/Alu	209	280	(32)	1334069
55	0.0	0.0	0.0	chr15	66150824	66150870	(35840319)	+	(GA)n	Simple_repeat	1	47	(0)	1334070
12	26.1	0.0	4.1	chr15	66150982	66151030	(35840159)	+	G-rich	Low_complexity	1	49	(0)	1334071
457	21.6	10.8	1.3	chr15	67930295	67930444	(34060745)	+	LTR104_Mam	LTR/Gypsy	631	796	(713)	1337406
33	0.0	0.0	0.0	chr15	67930457	67930484	(34060705)	+	(TC)n	Simple_repeat	1	28	(0)	1337407
394	37.4	7.8	3.3	chr15	67930490	67931125	(34060064)	+	LTR104_Mam	LTR/Gypsy	833	1499	(10)	1337406
47	2.1	2.1	0.0	chr15	70016136	70016183	(31975006)	+	(TC)n	Simple_repeat	1	49	(0)	1341333
30	27.6	0.0	0.0	chr15	70016199	70016276	(31974913)	+	(TC)n	Simple_repeat	1	78	(0)	1341333
1628	26.3	9.9	8.5	chr15	74153179	74153413	(27837776)	C	Arthur1B	DNA/hAT-Tip100	(0)	1225	944	1348347
2471	18.9	13.1	3.9	chr15	74153414	74153469	(27837720)	C	MLT2F	LTR/ERVL	(0)	663	615	1348348
43	2.5	0.0	0.0	chr15	74153470	74153510	(27837679)	+	(TC)n	Simple_repeat	1	41	(0)	1348349
2471	18.9	13.1	3.9	chr15	74153511	74153955	(27837234)	C	MLT2F	LTR/ERVL	(49)	614	93	1348348
64	0.0	1.7	0.0	chr15	89205129	89205186	(12786003)	+	(TC)n	Simple_repeat	1	59	(0)	1373819
1510	16.7	5.0	5.7	chr15	89205187	89205468	(12785721)	C	AluJr	SINE/Alu	(32)	280	1	1373820
59	1.9	0.0	0.0	chr15	89412826	89412880	(12578309)	+	(AG)n	Simple_repeat	1	55	(0)	1374155
29	25.4	0.0	4.1	chr15	96357557	96357653	(5633536)	+	(TTTCC)n	Simple_repeat	1	97	(0)	1385754
40	0.0	0.0	0.0	chr15	96357693	96357726	(5633463)	+	(TG)n	Simple_repeat	1	34	(0)	1385755
36	14.7	0.0	0.0	chr15	96357727	96357786	(5633403)	+	(AG)n	Simple_repeat	1	60	(0)	1385756
2085	11.7	0.0	2.9	chr16	690600	690908	(89647437)	C	AluSx1	SINE/Alu	(12)	300	1	1395078
243	26.7	12.6	0.0	chr16	9039241	9039330	(81299015)	+	L2c	LINE/L2	3231	3333	(54)	1410411
34	0.0	0.0	0.0	chr16	9039371	9039399	(81298946)	+	(AG)n	Simple_repeat	1	29	(0)	1410412
887	17.2	0.6	0.6	chr16	9039542	9039698	(81298647)	+	AluJb	SINE/Alu	156	312	(0)	1410413
35	0.0	0.0	0.0	chr16	9145968	9145997	(81192348)	+	(CT)n	Simple_repeat	1	30	(0)	1410678
25	0.0	0.0	0.0	chr16	9145998	9146025	(81192320)	+	(GT)n	Simple_repeat	1	28	(0)	1410679
50	4.0	0.0	0.0	chr16	9146026	9146077	(81192268)	+	(GA)n	Simple_repeat	1	52	(0)	1410680
21	20.3	3.1	0.0	chr16	9146078	9146109	(81192236)	+	(TCTGTG)n	Simple_repeat	1	34	(0)	1410681
813	20.3	3.4	3.9	chr16	9146110	9146314	(81192031)	C	MER20	DNA/hAT-Charlie	(9)	210	7	1410682
238	28.3	13.5	7.8	chr16	13486223	13486452	(76851893)	+	MLT1O	LTR/ERVL-MaLR	282	526	(16)	1420199
693	27.0	7.4	2.0	chr16	17253561	17253764	(73084581)	C	MIR	SINE/MIR	(34)	228	13	1428673
46	0.0	0.0	0.0	chr16	17253824	17253862	(73084483)	+	(GA)n	Simple_repeat	1	39	(0)	1428674
436	32.1	7.9	1.6	chr16	17253933	17254122	(73084223)	+	MIRb	SINE/MIR	2	204	(64)	1428675
38	6.4	0.0	0.0	chr16	23859869	23859917	(66478428)	+	(GA)n	Simple_repeat	1	49	(0)	1443308
366	23.1	12.0	8.5	chr16	23860068	23860262	(66478083)	+	MIR	SINE/MIR	41	253	(9)	1443309
70	0.0	0.0	0.0	chr16	24257369	24257428	(66080917)	+	(GA)n	Simple_repeat	1	60	(0)	1444215
48	2.1	0.0	2.0	chr16	27285116	27285165	(63053180)	+	(AG)n	Simple_repeat	1	50	(0)	1450769
344	32.4	2.6	0.9	chr16	46621615	46621726	(43716619)	+	MIRc	SINE/MIR	4	117	(151)	1465698
31	0.0	0.0	0.0	chr16	46621815	46621841	(43716504)	+	(AC)n	Simple_repeat	1	27	(0)	1465699
21	0.0	0.0	0.0	chr16	46621842	46621864	(43716481)	+	(GA)n	Simple_repeat	1	23	(0)	1465700
748	28.6	6.8	0.0	chr16	46621947	46622152	(43716193)	C	MIR	SINE/MIR	(1)	261	41	1465701
16	22.4	3.2	3.1	chr16	46691893	46691918	(43646427)	+	(CTCTTT)n	Simple_repeat	1	40	(0)	1465824
24	3.0	2.7	2.6	chr16	46691919	46691932	(43646413)	+	(CT)n	Simple_repeat	1	14	(0)	1465825
31	0.0	0.0	0.0	chr16	46691933	46691959	(43646386)	+	(CA)n	Simple_repeat	1	27	(0)	1465826
24	3.0	2.7	2.6	chr16	46691960	46691981	(43646364)	+	(CT)n	Simple_repeat	1	22	(0)	1465827
59	17.5	0.0	0.0	chr16	46830234	46830343	(43508002)	+	GA-rich	Low_complexity	1	110	(0)	1466113
61	0.0	0.0	0.0	chr16	51441060	51441111	(38897234)	+	(GA)n	Simple_repeat	1	52	(0)	1474367
38	0.0	2.4	2.4	chr16	58936845	58936885	(31401460)	+	(GA)n	Simple_repeat	1	42	(0)	1488101
287	27.7	0.0	0.0	chr16	58936993	58937057	(31401288)	+	MER2	DNA/TcMar-Tigger	1	65	(280)	1488102
63	0.0	0.0	0.0	chr16	72284988	72285041	(18053304)	+	(TC)n	Simple_repeat	1	54	(0)	1511244
14	29.8	3.0	2.2	chr16	73059189	73059303	(17279042)	+	GA-rich	Low_complexity	1	115	(0)	1512338
53	6.0	0.0	3.9	chr16	73059333	73059409	(17278936)	+	(AC)n	Simple_repeat	1	77	(0)	1512339
12	26.3	4.5	0.0	chr16	73059467	73059510	(17278835)	+	(TTTC)n	Simple_repeat	1	46	(0)	1512340
46	0.0	0.0	0.0	chr16	73059525	73059563	(17278782)	+	(TC)n	Simple_repeat	1	39	(0)	1512341
2520	6.0	0.3	1.0	chr17	5469177	5469490	(77787951)	C	AluSp	SINE/Alu	(1)	312	1	1555203
30	0.0	0.0	0.0	chr17	9529248	9529273	(73728168)	+	(AG)n	Simple_repeat	1	26	(0)	1562883
16	38.9	0.9	2.7	chr17	9529302	9529410	(73728031)	+	(TATA)n	Simple_repeat	1	110	(0)	1562884
1354	24.5	9.5	0.9	chr17	9529423	9529847	(73727594)	C	L1ME3A	LINE/L1	(13)	6160	5696	1562885
217	29.7	0.0	12.9	chr17	30171869	30171934	(53085507)	C	MIR3	SINE/MIR	(8)	200	139	1592089
46	0.0	0.0	0.0	chr17	30171935	30171973	(53085468)	+	(CA)n	Simple_repeat	1	39	(0)	1592090
46	0.0	0.0	0.0	chr17	30171977	30172015	(53085426)	+	(CT)n	Simple_repeat	1	39	(0)	1592091
217	29.7	0.0	12.9	chr17	30172016	30172060	(53085381)	C	MIR3	SINE/MIR	(70)	138	100	1592089
29	0.0	0.0	0.0	chr17	40444859	40444883	(42812558)	+	(AG)n	Simple_repeat	1	25	(0)	1612061
38	0.0	0.0	0.0	chr17	40444885	40444926	(42812515)	+	(AC)n	Simple_repeat	1	42	(0)	1612062
64	1.7	0.0	0.0	chr17	40444927	40444985	(42812456)	+	(AG)n	Simple_repeat	1	59	(0)	1612063
14	31.8	2.6	2.5	chr17	40445022	40445099	(42812342)	+	(CTTT)n	Simple_repeat	1	80	(0)	1612064
187	33.1	6.1	6.7	chr17	42773138	42773257	(40484184)	+	MIR1_Amn	SINE/MIR	6	118	(90)	1616344
1067	11.7	8.5	0.0	chr17	42999154	42999315	(40258126)	C	AluJb	SINE/Alu	(1)	311	135	1616847
246	21.1	0.0	0.0	chr17	43784964	43785015	(39472426)	C	MLT2B3	LTR/ERVL	(0)	554	503	1618597
43	8.8	0.0	0.0	chr17	43785016	43785075	(39472366)	+	(AG)n	Simple_repeat	1	60	(0)	1618598
2019	17.1	1.6	6.4	chr17	43785076	43785166	(39472275)	C	Ricksha_c	DNA/MULE-MuDR	(1203)	845	764	1618599
2224	16.4	7.9	6.5	chr17	43785167	43785424	(39472017)	C	MER66B	LTR/ERV1	(4)	482	206	1618600
445	27.0	15.6	7.0	chr17	44015221	44015381	(39242060)	+	MIRb	SINE/MIR	8	179	(89)	1619061
51	2.1	0.0	0.0	chr17	48239830	48239877	(35017564)	+	(GA)n	Simple_repeat	1	48	(0)	1627521
101	8.1	2.0	0.7	chr17	48647022	48647169	(34610272)	+	(GA)n	Simple_repeat	1	151	(0)	1628176
63	0.0	0.0	0.0	chr17	48677964	48678017	(34579424)	+	(TC)n	Simple_repeat	1	54	(0)	1628260
15	16.9	2.4	2.3	chr17	49868846	49868887	(33388554)	+	(CTCTGTC)n	Simple_repeat	1	43	(0)	1630723
75	0.0	2.8	0.0	chr17	49868899	49868969	(33388472)	+	(TC)n	Simple_repeat	1	73	(0)	1630724
57	0.0	0.0	0.0	chr17	57698893	57698941	(25558500)	+	(GT)n	Simple_repeat	1	49	(0)	1643662
193	26.1	0.0	5.5	chr17	57698942	57699014	(25558427)	+	L3	LINE/CR1	2037	2105	(1994)	1643663
36	0.0	0.0	0.0	chr17	57699015	57699045	(25558396)	+	(GA)n	Simple_repeat	1	31	(0)	1643664
26	0.0	0.0	0.0	chr17	57699046	57699074	(25558367)	+	(TG)n	Simple_repeat	1	29	(0)	1643665
200	25.7	0.0	5.4	chr17	57699075	57699148	(25558293)	+	L3	LINE/CR1	2036	2105	(1994)	1643663
41	0.0	0.0	0.0	chr17	57699149	57699183	(25558258)	+	(GA)n	Simple_repeat	1	35	(0)	1643666
17	0.0	0.0	0.0	chr17	57699184	57699202	(25558239)	+	(TG)n	Simple_repeat	1	19	(0)	1643667
211	23.7	0.0	8.4	chr17	57699203	57699285	(25558156)	+	L3	LINE/CR1	2036	2111	(1988)	1643663
2383	4.6	0.4	0.7	chr17	59209539	59209839	(24047602)	C	AluSq2	SINE/Alu	(0)	313	9	1646700
18	14.9	0.0	0.0	chr17	59209850	59209880	(24047561)	+	(T)n	Simple_repeat	1	31	(0)	1646701
37	6.4	2.0	0.0	chr17	67697274	67697322	(15560119)	+	(CT)n	Simple_repeat	1	50	(0)	1662570
746	25.2	0.0	0.0	chr17	74296194	74296324	(8961117)	+	FLAM_C	SINE/Alu	2	132	(11)	1673875
47	15.2	2.4	0.0	chr17	74296325	74296408	(8961033)	+	GA-rich	Low_complexity	1	86	(0)	1673876
655	14.2	10.2	0.0	chr17	74296412	74296517	(8960924)	C	AluJr	SINE/Alu	(194)	118	1	1673877
58	30.2	1.8	9.6	chr17	74514143	74514815	(8742626)	+	(TGACAGG)n	Simple_repeat	1	685	(0)	1674300
12	22.6	4.2	2.0	chr17	81393862	81393909	(1863532)	+	(GGCC)n	Simple_repeat	1	50	(0)	1686225
12	23.8	2.2	2.1	chr17	82065754	82065799	(1191642)	+	G-rich	Low_complexity	1	47	(0)	1687089
13	19.4	4.9	0.0	chr17	82065901	82065941	(1191500)	+	(AGAGGTC)n	Simple_repeat	1	43	(0)	1687090
11	14.8	4.9	4.7	chr17	82273465	82273505	(983936)	+	(CTCCGG)n	Simple_repeat	1	43	(0)	1687397
21	13.1	0.0	4.3	chr17	82273724	82273769	(983672)	+	(GGCGG)n	Simple_repeat	1	46	(0)	1687398
37	0.0	0.0	0.0	chr18	11143601	11143639	(69229646)	+	(AC)n	Simple_repeat	1	39	(0)	1705467
50	2.2	0.0	0.0	chr18	11143640	11143686	(69229599)	+	(CT)n	Simple_repeat	1	47	(0)	1705468
1572	22.6	7.5	2.4	chr18	23468748	23469265	(56904020)	C	MLT1E1A	LTR/ERVL-MaLR	(2)	678	35	1716267
79	10.0	4.5	0.0	chr18	23469305	23469459	(56903826)	+	(CT)n	Simple_repeat	1	162	(0)	1716268
2118	19.4	9.9	6.4	chr18	23862665	23863002	(56510283)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	188	1716970
40	2.6	0.0	0.0	chr18	23863003	23863041	(56510244)	+	(GA)n	Simple_repeat	1	39	(0)	1716971
2118	19.4	9.9	6.4	chr18	23863042	23863171	(56510114)	C	MLT1F1	LTR/ERVL-MaLR	(382)	187	72	1716970
26	12.3	0.0	0.0	chr18	26700494	26700537	(53672748)	+	(AGAG)n	Simple_repeat	1	44	(0)	1721378
493	31.4	9.3	5.4	chr18	32085287	32085373	(48287912)	C	LTR33A_	LTR/ERVL	(220)	300	199	1728807
50	0.0	0.0	0.0	chr18	32085374	32085416	(48287869)	+	(AG)n	Simple_repeat	1	43	(0)	1728808
2209	11.8	0.3	0.3	chr18	32085419	32085724	(48287561)	+	AluSq2	SINE/Alu	2	307	(6)	1728809
585	28.7	4.1	3.1	chr18	32085725	32085918	(48287367)	C	LTR33A_	LTR/ERVL	(326)	205	10	1728807
57	0.0	1.9	0.0	chr18	35413034	35413085	(44960200)	+	(AG)n	Simple_repeat	1	53	(0)	1733281
735	23.3	3.3	0.1	chr18	35567900	35568092	(44805193)	C	MLT1B	LTR/ERVL-MaLR	(10)	380	173	1733524
41	4.0	1.9	0.0	chr18	35568093	35568144	(44805141)	+	(AG)n	Simple_repeat	1	53	(0)	1733525
47	2.2	0.0	2.0	chr18	42154225	42154273	(38219012)	+	(TC)n	Simple_repeat	1	49	(0)	1742419
24	0.0	0.0	0.0	chr18	42154274	42154299	(38218986)	+	(AC)n	Simple_repeat	1	26	(0)	1742420
355	29.9	2.7	1.8	chr18	42154374	42154482	(38218803)	+	L2b	LINE/L2	3263	3372	(3)	1742421
14	13.6	0.0	5.6	chr18	44773652	44773687	(35599598)	+	(AACA)n	Simple_repeat	1	36	(0)	1745934
41	2.5	0.0	0.0	chr18	44773794	44773833	(35599452)	+	(CT)n	Simple_repeat	1	40	(0)	1745935
38	0.0	0.0	0.0	chr18	44773839	44773871	(35599414)	+	(TG)n	Simple_repeat	1	33	(0)	1745936
1679	17.6	5.6	0.8	chr18	49558263	49558431	(30814854)	+	MLT1A	LTR/ERVL-MaLR	2	187	(187)	1753796
50	0.0	2.2	0.0	chr18	49558432	49558477	(30814808)	+	(TC)n	Simple_repeat	1	47	(0)	1753797
1679	17.6	5.6	0.8	chr18	49558478	49558662	(30814623)	+	MLT1A	LTR/ERVL-MaLR	188	373	(1)	1753796
1799	14.4	6.1	19.4	chr18	54086440	54086938	(26286347)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1760684
257	32.3	20.2	0.0	chr18	61088681	61088810	(19284475)	+	MIR3	SINE/MIR	32	194	(14)	1771412
35	0.0	0.0	0.0	chr18	61088928	61088965	(19284320)	+	(GA)n	Simple_repeat	1	38	(0)	1771413
51	0.0	0.0	0.0	chr18	61088966	61089009	(19284276)	+	(GT)n	Simple_repeat	1	44	(0)	1771414
1763	13.6	1.1	1.5	chr18	62647843	62648115	(17725170)	+	AluSz6	SINE/Alu	28	299	(13)	1773785
31	0.0	0.0	0.0	chr18	62648116	62648142	(17725143)	+	(AG)n	Simple_repeat	1	27	(0)	1773786
39	10.8	1.7	0.0	chr19	5246885	5246944	(53370672)	+	(GA)n	Simple_repeat	1	61	(0)	1807483
12	31.1	3.2	1.5	chr19	5247028	5247090	(53370526)	+	GA-rich	Low_complexity	1	65	(0)	1807484
82	30.6	1.8	0.3	chr19	7197505	7197782	(51419834)	+	(GT)n	Simple_repeat	1	283	(0)	1812250
41	12.2	0.0	0.0	chr19	7197803	7197864	(51419752)	+	(AG)n	Simple_repeat	1	62	(0)	1812251
40	22.6	1.3	0.7	chr19	7197919	7198077	(51419539)	+	(GT)n	Simple_repeat	1	160	(0)	1812252
1832	20.1	0.0	1.9	chr19	10428070	10428387	(48189229)	+	AluJo	SINE/Alu	1	312	(0)	1819713
22	10.1	0.0	0.0	chr19	10428388	10428419	(48189197)	+	(GA)n	Simple_repeat	1	32	(0)	1819714
40	6.6	0.0	0.0	chr19	13023061	13023108	(45594508)	+	(TC)n	Simple_repeat	1	48	(0)	1825767
18	14.7	0.0	0.0	chr19	13023167	13023196	(45594420)	+	(GA)n	Simple_repeat	1	30	(0)	1825768
1823	14.4	10.5	0.9	chr19	14274662	14274832	(44342784)	C	THE1D	LTR/ERVL-MaLR	(0)	381	207	1829030
107	0.0	1.1	0.0	chr19	14274833	14274926	(44342690)	+	(GA)n	Simple_repeat	1	95	(0)	1829031
1823	14.4	10.5	0.9	chr19	14274927	14275098	(44342518)	C	THE1D	LTR/ERVL-MaLR	(175)	206	2	1829030
2105	13.6	0.0	1.6	chr19	17892355	17892652	(40724964)	+	AluSx	SINE/Alu	2	296	(16)	1837549
54	0.0	0.0	0.0	chr19	17892653	17892698	(40724918)	+	(AG)n	Simple_repeat	1	46	(0)	1837550
2105	13.6	0.0	1.6	chr19	17892699	17892715	(40724901)	+	AluSx	SINE/Alu	297	312	(0)	1837549
231	28.9	11.7	2.3	chr19	17892732	17892862	(40724754)	C	L2a	LINE/L2	(150)	3237	3093	1837541
63	1.6	1.6	0.0	chr19	30223437	30223498	(28394118)	+	(GA)n	Simple_repeat	1	63	(0)	1851569
17	0.0	0.0	0.0	chr19	34677161	34677179	(23940437)	+	(A)n	Simple_repeat	1	19	(0)	1858988
42	0.0	0.0	0.0	chr19	43503281	43503316	(15114300)	+	(TC)n	Simple_repeat	1	36	(0)	1876953
1886	10.8	1.8	2.1	chr19	43503318	43503596	(15114020)	C	AluJo	SINE/Alu	(24)	288	11	1876954
240	32.2	5.9	0.0	chr19	44682845	44682987	(13934629)	C	MIR3	SINE/MIR	(54)	154	3	1879323
34	0.0	0.0	0.0	chr19	44683056	44683084	(13934532)	+	(CT)n	Simple_repeat	1	29	(0)	1879324
27	24.1	0.0	0.0	chr19	47420836	47420911	(11196705)	+	(TCTCTC)n	Simple_repeat	1	76	(0)	1886120
27	0.0	0.0	0.0	chr19	47420911	47420940	(11196676)	+	(CA)n	Simple_repeat	1	30	(0)	1886121
40	0.0	0.0	0.0	chr19	47420941	47420974	(11196642)	+	(CT)n	Simple_repeat	1	34	(0)	1886122
1753	8.5	9.3	0.4	chr19	47849355	47849600	(10768016)	C	AluSx1	SINE/Alu	(7)	305	36	1887234
69	0.0	1.6	0.0	chr19	47849623	47849684	(10767932)	+	(AG)n	Simple_repeat	1	63	(0)	1887235
1651	14.1	1.0	5.9	chr19	50206932	50207237	(8410379)	+	AluJo	SINE/Alu	1	291	(21)	1892971
80	2.6	0.0	0.0	chr19	50207238	50207314	(8410302)	+	(AG)n	Simple_repeat	1	77	(0)	1892972
44	0.0	0.0	0.0	chr19	51020199	51020236	(7597380)	+	(AG)n	Simple_repeat	1	38	(0)	1894830
14	24.3	2.0	2.0	chr2	3575498	3575547	(238617982)	+	G-rich	Low_complexity	1	51	(0)	1914686
28	15.2	2.0	0.0	chr2	6346003	6346053	(235847476)	+	(TC)n	Simple_repeat	1	52	(0)	1918391
20	0.0	0.0	0.0	chr2	6346053	6346074	(235847455)	+	(CA)n	Simple_repeat	1	22	(0)	1918392
5106	16.0	5.7	0.0	chr2	24385381	24385735	(217807794)	C	L1M1	LINE/L1	(5418)	2147	1757	1946007
50	0.0	0.0	0.0	chr2	24385736	24385778	(217807751)	+	(TC)n	Simple_repeat	1	43	(0)	1946008
5106	16.0	5.7	0.0	chr2	24385779	24386249	(217807280)	C	L1M1	LINE/L1	(5809)	1756	1272	1946007
1157	22.7	14.2	2.1	chr2	30693285	30693450	(211500079)	+	MLT1A	LTR/ERVL-MaLR	1	198	(176)	1957424
121	0.8	3.3	0.0	chr2	30693451	30693571	(211499958)	+	(TC)n	Simple_repeat	1	125	(0)	1957425
1157	22.7	14.2	2.1	chr2	30693572	30693732	(211499797)	+	MLT1A	LTR/ERVL-MaLR	199	374	(0)	1957424
60	1.8	0.0	0.0	chr2	37533248	37533303	(204660226)	+	(GA)n	Simple_repeat	1	56	(0)	1967874
1354	23.5	5.7	5.2	chr2	37533304	37533314	(204660215)	C	MLT1F	LTR/ERVL-MaLR	(359)	189	179	1967873
1072	4.7	0.0	2.3	chr2	37533325	37533452	(204660077)	C	AluYc	SINE/Alu	(10)	289	165	1967875
826	19.6	0.0	0.0	chr2	37533454	37533601	(204659928)	C	MLT1F	LTR/ERVL-MaLR	(421)	148	1	1967873
60	8.1	0.0	0.0	chr2	43025275	43025352	(199168177)	+	(CT)n	Simple_repeat	1	78	(0)	1976735
92	3.3	0.0	0.0	chr2	43046824	43046915	(199146614)	+	(TC)n	Simple_repeat	1	92	(0)	1976772
81	0.0	0.0	0.0	chr2	45297823	45297891	(196895638)	+	(GA)n	Simple_repeat	1	69	(0)	1980513
24	11.1	2.6	0.0	chr2	57516828	57516866	(184676663)	+	(GA)n	Simple_repeat	1	40	(0)	1998682
59	1.9	0.0	0.0	chr2	64700626	64700680	(177492849)	+	(TC)n	Simple_repeat	1	55	(0)	2009790
2312	10.9	0.3	0.6	chr2	64700681	64700985	(177492544)	C	AluSx1	SINE/Alu	(7)	305	1	2009791
58	1.9	0.0	0.0	chr2	65302104	65302157	(176891372)	+	(AG)n	Simple_repeat	1	54	(0)	2011014
210	19.0	0.0	2.3	chr2	65604843	65604885	(176588644)	+	L2a	LINE/L2	3385	3426	(0)	2011623
227	27.4	0.0	0.0	chr2	65604894	65604944	(176588585)	C	MIR1_Amn	SINE/MIR	(155)	75	25	2011624
29	0.0	0.0	0.0	chr2	65604956	65604980	(176588549)	+	(TC)n	Simple_repeat	1	25	(0)	2011625
22	0.0	0.0	0.0	chr2	65604981	65605004	(176588525)	+	(TG)n	Simple_repeat	1	24	(0)	2011626
41	0.0	0.0	0.0	chr2	65605005	65605039	(176588490)	+	(GA)n	Simple_repeat	1	35	(0)	2011627
247	25.4	13.9	4.0	chr2	69893670	69893817	(172299712)	+	L1ME4c	LINE/L1	608	772	(58)	2017954
67	9.3	2.9	0.0	chr2	74290588	74290690	(167902839)	+	(GA)n	Simple_repeat	1	106	(0)	2025148
2831	19.8	3.8	0.0	chr2	75355651	75355922	(166837607)	C	MLT2B3	LTR/ERVL	(48)	506	233	2026852
49	2.2	0.0	0.0	chr2	75355923	75355968	(166837561)	+	(GA)n	Simple_repeat	1	46	(0)	2026854
2831	19.8	3.8	0.0	chr2	75355969	75356181	(166837348)	C	MLT2B3	LTR/ERVL	(322)	232	3	2026852
304	30.6	3.9	0.0	chr2	85612390	85612487	(156581042)	+	MIR	SINE/MIR	81	182	(80)	2041128
256	30.1	5.6	9.5	chr2	85732710	85732878	(156460651)	C	L2b	LINE/L2	(162)	3213	3052	2041398
37	0.0	0.0	0.0	chr2	85732939	85732970	(156460559)	+	(GA)n	Simple_repeat	1	32	(0)	2041399
2451	13.9	4.5	6.8	chr2	96409270	96409596	(145783933)	+	LTR35A	LTR/ERV1	138	443	(104)	2052097
297	18.1	2.7	5.2	chr2	96409606	96409797	(145783732)	C	HERVIP10FH-int	LTR/ERV1	(4091)	1011	825	2052099
853	11.7	0.8	0.8	chr2	96409798	96409926	(145783603)	+	LTR35A	LTR/ERV1	417	545	(2)	2052097
1834	13.8	3.0	2.0	chr2	98733557	98733834	(143459695)	+	AluJo	SINE/Alu	2	278	(34)	2055404
54	0.0	0.0	0.0	chr2	98733835	98733880	(143459649)	+	(TC)n	Simple_repeat	1	46	(0)	2055405
1834	13.8	3.0	2.0	chr2	98733881	98733899	(143459630)	+	AluJo	SINE/Alu	283	301	(11)	2055404
2250	10.2	0.7	0.3	chr2	98733900	98734194	(143459335)	+	AluSq2	SINE/Alu	2	297	(16)	2055406
51	3.9	0.0	0.0	chr2	136031116	136031168	(106162361)	+	(AC)n	Simple_repeat	1	53	(0)	2110054
259	15.6	1.5	7.2	chr2	136031169	136031237	(106162292)	C	HERVFH21-int	LTR/ERV1	(6443)	86	22	2110055
36	0.0	0.0	0.0	chr2	143468634	143468664	(98724865)	+	(GA)n	Simple_repeat	1	31	(0)	2120097
23	0.0	3.3	0.0	chr2	143468665	143468690	(98724839)	+	(TG)n	Simple_repeat	2	28	(0)	2120098
44	2.4	0.0	0.0	chr2	144510688	144510729	(97682800)	+	(CT)n	Simple_repeat	1	42	(0)	2121488
41	0.0	0.0	0.0	chr2	157414582	157414616	(84778913)	+	(AG)n	Simple_repeat	1	35	(0)	2138701
1294	17.2	7.2	3.9	chr2	168476972	168477166	(73716363)	C	MLT1A0	LTR/ERVL-MaLR	(16)	349	152	2153614
57	1.9	0.0	0.0	chr2	168477167	168477219	(73716310)	+	(GA)n	Simple_repeat	1	53	(0)	2153615
1294	17.2	7.2	3.9	chr2	168477220	168477359	(73716170)	C	MLT1A0	LTR/ERVL-MaLR	(214)	151	2	2153614
32	3.2	0.0	0.0	chr2	174594677	174594708	(67598821)	+	(TC)n	Simple_repeat	1	32	(0)	2163540
15	5.6	0.0	0.0	chr2	174594709	174594727	(67598802)	+	(AC)n	Simple_repeat	1	19	(0)	2163541
16	13.2	2.8	2.7	chr2	174599769	174599792	(67593737)	+	(AC)n	Simple_repeat	1	25	(0)	2163549
41	6.4	0.0	0.0	chr2	174599793	174599841	(67593688)	+	(CT)n	Simple_repeat	1	49	(0)	2163550
16	13.2	2.8	2.7	chr2	174599842	174599852	(67593677)	+	(AC)n	Simple_repeat	2	11	(0)	2163551
1854	13.2	5.6	1.4	chr2	174599882	174600173	(67593356)	C	MER1B	DNA/hAT-Charlie	(1)	338	34	2163552
288	5.4	2.6	0.0	chr2	186849699	186849735	(55343794)	+	AluYa5	SINE/Alu	143	180	(131)	2179611
46	0.0	2.1	2.1	chr2	186849757	186849803	(55343726)	+	(TC)n	Simple_repeat	1	48	(0)	2179612
24	0.0	0.0	0.0	chr2	186849804	186849829	(55343700)	+	(GT)n	Simple_repeat	1	26	(0)	2179613
1104	5.0	0.0	4.3	chr2	189763324	189763464	(52430065)	+	AluSx3	SINE/Alu	173	307	(4)	2183332
2590	4.4	0.3	0.0	chr2	196799959	196800252	(45393277)	C	AluSc8	SINE/Alu	(16)	295	1	2192924
1976	14.3	6.7	5.0	chr2	197187453	197187644	(45005885)	+	MLT1B	LTR/ERVL-MaLR	1	190	(200)	2193536
53	4.5	4.3	0.0	chr2	197187645	197187713	(45005816)	+	(TC)n	Simple_repeat	1	72	(0)	2193537
1976	14.3	6.7	5.0	chr2	197187714	197187903	(45005626)	+	MLT1B	LTR/ERVL-MaLR	191	390	(0)	2193536
2108	10.9	0.0	0.3	chr2	197373678	197373960	(44819569)	C	AluSx	SINE/Alu	(30)	282	1	2193896
128	1.7	0.8	0.0	chr2	197374036	197374156	(44819373)	+	(TC)n	Simple_repeat	1	122	(0)	2193897
42	0.0	0.0	0.0	chr2	198055295	198055330	(44138199)	+	(CT)n	Simple_repeat	1	36	(0)	2194968
16	5.2	0.0	0.0	chr2	198055331	198055350	(44138179)	+	(GT)n	Simple_repeat	1	20	(0)	2194969
37	2.9	0.0	0.0	chr2	198055353	198055388	(44138141)	+	(GA)n	Simple_repeat	1	36	(0)	2194970
16	9.8	0.0	0.0	chr2	198055512	198055533	(44137996)	+	(T)n	Simple_repeat	1	22	(0)	2194971
65	1.7	0.0	0.0	chr2	202393875	202393934	(39799595)	+	(GA)n	Simple_repeat	1	60	(0)	2201896
4131	21.0	9.1	10.9	chr2	202655455	202655700	(39537829)	C	L1MEf	LINE/L1	(2391)	4153	3916	2202464
67	1.6	0.0	0.0	chr2	202655701	202655762	(39537767)	+	(AG)n	Simple_repeat	1	62	(0)	2202465
4321	21.0	9.1	10.9	chr2	202655763	202655784	(39537745)	C	L1MEf	LINE/L1	(2629)	3915	3893	2202464
683	12.3	1.9	0.0	chr2	202655785	202655890	(39537639)	C	HY1	scRNA	(5)	114	7	2202466
29	0.0	0.0	0.0	chr2	205722146	205722170	(36471359)	+	(CT)n	Simple_repeat	1	25	(0)	2207329
47	0.0	0.0	0.0	chr2	205722173	205722212	(36471317)	+	(AC)n	Simple_repeat	1	40	(0)	2207330
3648	19.9	12.2	0.8	chr2	221131178	221132116	(21061413)	+	L1MC4	LINE/L1	6841	7902	(140)	2230589
28	8.3	0.0	0.0	chr2	221132124	221132161	(21061368)	+	(TG)n	Simple_repeat	1	38	(0)	2230590
29	8.1	0.0	0.0	chr2	221132161	221132199	(21061330)	+	(GA)n	Simple_repeat	1	39	(0)	2230591
243	20.4	20.0	0.0	chr2	221132200	221132287	(21061242)	+	L1MC4	LINE/L1	7914	8023	(19)	2230589
297	31.9	2.4	3.3	chr2	221132361	221132505	(21061024)	+	L2a	LINE/L2	3212	3334	(92)	2230588
44	0.0	0.0	0.0	chr2	221520507	221520544	(20672985)	+	(CA)n	Simple_repeat	1	38	(0)	2231184
30	15.9	1.8	0.0	chr2	221520545	221520600	(20672929)	+	GA-rich	Low_complexity	1	57	(0)	2231185
31	0.0	0.0	0.0	chr2	225039687	225039713	(17153816)	+	(TC)n	Simple_repeat	1	27	(0)	2236930
81	13.1	3.9	0.6	chr20	6841254	6841408	(57602759)	+	GA-rich	Low_complexity	1	161	(0)	2275032
150	8.0	2.3	0.0	chr20	8018261	8018528	(56425639)	+	(GA)n	Simple_repeat	1	274	(0)	2276652
615	27.4	11.0	2.9	chr20	18167033	18167340	(46276827)	C	HAL1	LINE/L1	(2015)	492	157	2292251
462	26.7	5.8	3.0	chr20	18167511	18167780	(46276387)	C	L1M4	LINE/L1	(3103)	3043	2766	2292252
46	0.0	2.3	0.0	chr20	31846443	31846485	(32597682)	+	(AG)n	Simple_repeat	1	44	(0)	2307004
521	20.7	3.9	20.5	chr20	33401624	33401937	(31042230)	+	MER33	DNA/hAT-Charlie	14	267	(57)	2310618
135	3.4	2.0	0.7	chr20	36466913	36467064	(27977103)	+	(TC)n	Simple_repeat	1	155	(0)	2317698
219	38.0	2.7	1.8	chr20	36467084	36467193	(27976974)	C	L2b	LINE/L2	(35)	3340	3230	2317699
278	26.9	4.9	0.0	chr20	41693485	41693562	(22750605)	C	LTR91	LTR/ERVL	(45)	154	73	2327924
39	13.9	1.5	0.0	chr20	53873159	53873223	(10570944)	+	GA-rich	Low_complexity	1	66	(0)	2354556
807	34.9	3.2	2.7	chr20	58976478	58976741	(5467426)	C	L2	LINE/L2	(629)	2790	2520	2363747
48	18.1	2.7	1.8	chr20	58976749	58976858	(5467309)	+	(CT)n	Simple_repeat	1	113	(0)	2363749
49	0.0	0.0	0.0	chr20	62550723	62550764	(1893403)	+	(TC)n	Simple_repeat	1	42	(0)	2368689
136	14.2	0.9	0.0	chr20	63101557	63101782	(1342385)	+	(TCTCTC)n	Simple_repeat	1	228	(0)	2369269
328	27.1	3.7	1.5	chr20	63730789	63730919	(713248)	+	Charlie18a	DNA/hAT-Charlie	165	298	(44)	2369955
57	0.0	0.0	0.0	chr20	63730923	63730971	(713196)	+	(TC)n	Simple_repeat	1	49	(0)	2369956
18	0.0	0.0	0.0	chr20	63730972	63730991	(713176)	+	(GT)n	Simple_repeat	1	20	(0)	2369957
28	0.0	0.0	0.0	chr20	64120329	64120359	(323808)	+	(AG)n	Simple_repeat	1	31	(0)	2370516
43	0.0	0.0	0.0	chr20	64120360	64120396	(323771)	+	(GT)n	Simple_repeat	1	37	(0)	2370517
1328	27.3	10.2	1.8	chr21	24113089	24113543	(22596440)	C	LTR40A1	LTR/ERVL	(78)	506	9	2390650
52	0.0	2.1	0.0	chr21	24113576	24113623	(22596360)	+	(AG)n	Simple_repeat	1	49	(0)	2390651
4054	18.4	2.8	3.1	chr21	24113735	24114295	(22595688)	+	L1MA4	LINE/L1	4443	5004	(1139)	2390652
41	7.2	0.0	0.0	chr21	26166869	26166926	(20543057)	+	(AGAGAG)n	Simple_repeat	1	58	(0)	2393601
30	0.0	0.0	0.0	chr21	26166928	26166953	(20543030)	+	(GT)n	Simple_repeat	1	26	(0)	2393602
11	22.1	0.0	4.9	chr21	44939893	44939933	(1770050)	+	(CCGCGAC)n	Simple_repeat	1	41	(0)	2422349
59	1.9	0.0	0.0	chr21	45646054	45646108	(1063875)	+	(TC)n	Simple_repeat	1	55	(0)	2423036
35	0.0	0.0	0.0	chr21	45646109	45646146	(1063837)	+	(GT)n	Simple_repeat	1	38	(0)	2423037
54	8.6	0.0	0.0	chr22	26648881	26648954	(24169514)	+	(GA)n	Simple_repeat	1	74	(0)	2444851
777	28.8	7.1	0.4	chr22	26649089	26649325	(24169143)	C	MIRb	SINE/MIR	(6)	262	9	2444852
42	0.0	0.0	0.0	chr22	33203067	33203102	(17615366)	+	(CT)n	Simple_repeat	1	36	(0)	2458560
21	0.0	0.0	0.0	chr22	33203103	33203125	(17615343)	+	(GT)n	Simple_repeat	1	23	(0)	2458561
25	16.2	0.0	0.0	chr22	33203128	33203175	(17615293)	+	GA-rich	Low_complexity	1	48	(0)	2458562
254	5.6	1.3	0.0	chr22	37328868	37329168	(13489300)	+	(CT)n	Simple_repeat	1	305	(0)	2466998
193	23.2	12.5	0.0	chr22	37686095	37686150	(13132318)	C	L2b	LINE/L2	(3)	3423	3360	2467834
669	26.0	11.4	4.6	chr3	14685035	14685418	(183610141)	+	L1ME3C	LINE/L1	5706	6118	(5)	2517448
38	4.9	0.0	0.0	chr3	14685440	14685481	(183610078)	+	(CT)n	Simple_repeat	1	42	(0)	2517450
19	11.6	0.0	0.0	chr3	14685482	14685510	(183610049)	+	(GT)n	Simple_repeat	1	29	(0)	2517451
4823	14.2	2.3	2.9	chr3	14685511	14685851	(183609708)	C	L1MA9	LINE/L1	(153)	6159	5833	2517452
68	0.0	0.0	0.0	chr3	31216580	31216637	(167078922)	+	(TC)n	Simple_repeat	1	58	(0)	2541719
49	0.0	0.0	0.0	chr3	43233666	43233707	(155061852)	+	(TC)n	Simple_repeat	1	42	(0)	2560338
32	0.0	0.0	0.0	chr3	43233708	43233741	(155061818)	+	(AC)n	Simple_repeat	2	35	(0)	2560339
1364	25.7	6.2	4.9	chr3	45484733	45485260	(152810299)	C	HAL1	LINE/L1	(342)	2165	1631	2563904
267	24.7	9.7	0.0	chr3	45485321	45485413	(152810146)	C	L1M7	LINE/L1	(6067)	151	49	2563913
35	0.0	0.0	0.0	chr3	45612071	45612100	(152683459)	+	(CT)n	Simple_repeat	1	30	(0)	2564143
1746	17.6	0.7	0.0	chr3	45612105	45612383	(152683176)	C	AluJo	SINE/Alu	(31)	281	1	2564144
1744	17.3	0.4	0.0	chr3	49789824	49790095	(148505464)	+	AluJo	SINE/Alu	2	274	(38)	2571983
71	4.2	0.0	0.0	chr3	49790112	49790185	(148505374)	+	(TC)n	Simple_repeat	1	74	(0)	2571984
43	0.0	0.0	0.0	chr3	49790228	49790264	(148505295)	+	(CA)n	Simple_repeat	1	37	(0)	2571985
61	0.0	0.0	0.0	chr3	56995621	56995672	(141299887)	+	(GA)n	Simple_repeat	1	52	(0)	2583127
30	5.5	0.0	0.0	chr3	57016995	57017032	(141278527)	+	(CT)n	Simple_repeat	1	38	(0)	2583180
38	0.0	0.0	0.0	chr3	57017033	57017065	(141278494)	+	(CA)n	Simple_repeat	1	33	(0)	2583181
30	14.5	1.9	0.0	chr3	67117567	67117619	(131177940)	+	(TG)n	Simple_repeat	1	54	(0)	2600371
42	5.8	0.0	0.0	chr3	67117619	67117672	(131177887)	+	(GA)n	Simple_repeat	1	54	(0)	2600372
48	0.0	0.0	0.0	chr3	105368224	105368264	(92927295)	+	(AG)n	Simple_repeat	1	41	(0)	2648182
73	1.5	0.0	0.0	chr3	105754494	105754560	(92540999)	+	(AG)n	Simple_repeat	1	67	(0)	2648659
225	27.5	12.2	4.7	chr3	108630752	108631007	(89664552)	C	HAL1	LINE/L1	(0)	2507	2230	2652581
56	0.0	0.0	0.0	chr3	108631009	108631056	(89664503)	+	(AC)n	Simple_repeat	1	48	(0)	2652582
35	0.0	0.0	0.0	chr3	108631057	108631094	(89664465)	+	(TC)n	Simple_repeat	1	38	(0)	2652583
890	24.4	2.8	4.3	chr3	108631124	108631380	(89664179)	C	HAL1	LINE/L1	(669)	1838	1586	2652581
66	18.3	2.9	0.7	chr3	114454074	114454211	(83841348)	+	GA-rich	Low_complexity	1	142	(0)	2660762
107	22.7	2.0	0.4	chr3	114454929	114455183	(83840376)	+	GA-rich	Low_complexity	1	260	(0)	2660764
67	19.0	2.7	0.7	chr3	115100328	115100474	(83195085)	+	GA-rich	Low_complexity	1	151	(0)	2661646
32	11.2	0.0	0.0	chr3	118633834	118633881	(79661678)	+	(GA)n	Simple_repeat	1	48	(0)	2666459
42	0.0	0.0	0.0	chr3	118633882	118633917	(79661642)	+	(GT)n	Simple_repeat	1	36	(0)	2666460
2276	10.0	0.3	0.7	chr3	119332202	119332500	(78963059)	C	AluSq2	SINE/Alu	(15)	298	1	2667395
242	34.3	7.7	3.6	chr3	119332501	119332575	(78962984)	C	CR1-3_Croc	LINE/CR1	(984)	2621	2548	2667394
50	4.0	0.0	0.0	chr3	119332585	119332636	(78962923)	+	(TC)n	Simple_repeat	1	52	(0)	2667396
38	8.3	0.0	0.0	chr3	119332637	119332688	(78962871)	+	(AC)n	Simple_repeat	1	52	(0)	2667397
17	5.0	0.0	0.0	chr3	122576431	122576451	(75719108)	+	(AG)n	Simple_repeat	1	21	(0)	2672247
66	0.0	0.0	0.0	chr3	123030623	123030678	(75264881)	+	(TC)n	Simple_repeat	1	56	(0)	2673005
15	0.0	0.0	0.0	chr3	123030686	123030702	(75264857)	+	(TG)n	Simple_repeat	1	17	(0)	2673006
41	0.0	0.0	0.0	chr3	123346608	123346642	(74948917)	+	(TC)n	Simple_repeat	1	35	(0)	2673554
18	4.5	0.0	0.0	chr3	123346643	123346665	(74948894)	+	(GT)n	Simple_repeat	1	23	(0)	2673555
35	6.9	0.0	0.0	chr3	125179705	125179750	(73115809)	+	(GA)n	Simple_repeat	1	46	(0)	2676575
1601	22.4	4.9	1.3	chr3	136550777	136551169	(61744390)	C	L1MC3	LINE/L1	(305)	7480	7073	2694560
68	6.0	0.0	0.0	chr3	136551181	136551267	(61744292)	+	(GA)n	Simple_repeat	1	87	(0)	2694566
1308	18.6	1.1	10.3	chr3	136551269	136551579	(61743980)	C	AluJb	SINE/Alu	(30)	282	1	2694567
828	31.3	9.0	1.5	chr3	137273925	137274261	(61021298)	+	MLT1K	LTR/ERVL-MaLR	1	365	(230)	2695908
46	15.7	0.0	0.0	chr3	137274324	137274401	(61021158)	+	GA-rich	Low_complexity	1	78	(0)	2695909
486	26.0	9.7	2.2	chr3	137274402	137274582	(61020977)	+	MLT1K	LTR/ERVL-MaLR	400	595	(0)	2695908
616	33.2	7.4	3.5	chr3	149852879	149853396	(48442163)	C	L1ME3G	LINE/L1	(184)	740	201	2714319
65	1.7	0.0	0.0	chr3	149853442	149853501	(48442058)	+	(GA)n	Simple_repeat	1	60	(0)	2714320
68	0.0	3.1	0.0	chr3	158106572	158106636	(40188923)	+	(AG)n	Simple_repeat	1	67	(0)	2726364
532	27.8	11.5	4.1	chr3	159967148	159967230	(38328329)	+	L2a	LINE/L2	3053	3154	(272)	2729038
56	0.0	0.0	0.0	chr3	159967231	159967278	(38328281)	+	(TC)n	Simple_repeat	1	48	(0)	2729039
532	27.8	11.5	4.1	chr3	159967279	159967539	(38328020)	+	L2a	LINE/L2	3155	3426	(0)	2729038
99	5.4	0.9	0.0	chr3	165196874	165196988	(33098571)	+	(TC)n	Simple_repeat	1	116	(0)	2735886
1738	21.9	5.8	2.7	chr3	165724969	165725458	(32570101)	+	MLT2B4	LTR/ERVL	165	703	(19)	2736622
26	6.3	0.0	0.0	chr3	165725460	165725493	(32570066)	+	(CA)n	Simple_repeat	1	34	(0)	2736623
50	6.4	0.0	0.0	chr3	165725493	165725557	(32570002)	+	(AG)n	Simple_repeat	1	65	(0)	2736624
226	36.2	7.3	2.6	chr3	165725583	165725738	(32569821)	C	MLT1H	LTR/ERVL-MaLR	(280)	269	106	2736625
58	1.7	3.3	0.0	chr3	168211674	168211734	(30083825)	+	(AG)n	Simple_repeat	1	63	(0)	2739748
509	30.6	7.5	1.1	chr3	194975665	194975839	(3319720)	+	MIR3	SINE/MIR	3	189	(19)	2782167
37	0.0	0.0	0.0	chr3	194975841	194975872	(3319687)	+	(TC)n	Simple_repeat	1	32	(0)	2782168
28	0.0	0.0	0.0	chr3	194975873	194975903	(3319656)	+	(AC)n	Simple_repeat	1	31	(0)	2782169
2306	9.9	0.3	0.0	chr3	195204063	195204355	(3091204)	+	AluSg4	SINE/Alu	1	294	(16)	2782535
20	7.8	0.0	0.0	chr3	195204442	195204468	(3091091)	+	(AC)n	Simple_repeat	1	27	(0)	2782536
38	2.8	0.0	0.0	chr3	195204469	195204505	(3091054)	+	(CT)n	Simple_repeat	1	37	(0)	2782537
25	6.0	2.9	0.0	chr4	1872557	1872591	(188341964)	+	(GT)n	Simple_repeat	1	36	(0)	2790726
53	0.0	0.0	0.0	chr4	1872592	1872636	(188341919)	+	(GA)n	Simple_repeat	1	45	(0)	2790727
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
2575	7.0	0.0	0.3	chr4	53417360	53417671	(136796884)	+	AluSp	SINE/Alu	2	312	(1)	2867662
23	0.0	0.0	0.0	chr4	53417739	53417763	(136796792)	+	(AC)n	Simple_repeat	1	25	(0)	2867663
67	0.0	0.0	0.0	chr4	53417764	53417820	(136796735)	+	(CT)n	Simple_repeat	1	57	(0)	2867664
626	29.6	20.2	5.4	chr4	53492086	53492506	(136722049)	C	L2a	LINE/L2	(76)	3350	2831	2867761
43	0.0	0.0	0.0	chr4	53492507	53492543	(136722012)	+	(GA)n	Simple_repeat	1	37	(0)	2867763
626	28.4	19.8	6.0	chr4	53492544	53492954	(136721601)	C	L2a	LINE/L2	(589)	2830	2324	2867761
54	10.0	3.5	0.0	chr4	54107379	54107464	(136107091)	+	(AG)n	Simple_repeat	1	89	(0)	2868735
2564	18.7	6.1	3.1	chr4	78628979	78629204	(111585351)	C	MER77B	LTR/ERVL	(0)	700	457	2902439
2796	15.5	8.5	6.3	chr4	78629205	78629319	(111585236)	C	LTR9	LTR/ERV1	(0)	612	494	2902440
79	0.0	0.0	0.0	chr4	78629320	78629386	(111585169)	+	(AG)n	Simple_repeat	1	67	(0)	2902441
2796	15.5	8.5	6.3	chr4	78629387	78629868	(111584687)	C	LTR9	LTR/ERV1	(119)	493	1	2902440
669	29.1	10.6	0.4	chr4	104539001	104539238	(85675317)	C	L2	LINE/L2	(2611)	808	544	2938327
95	2.3	0.0	0.0	chr4	105898291	105898380	(84316175)	+	(TC)n	Simple_repeat	1	90	(0)	2940143
36	2.9	0.0	0.0	chr4	112861834	112861868	(77352687)	+	(AG)n	Simple_repeat	1	35	(0)	2950015
578	28.0	8.0	0.5	chr4	112861958	112862176	(77352379)	+	MIR	SINE/MIR	24	260	(2)	2950016
295	28.0	2.4	5.6	chr4	118890568	118890697	(71323858)	+	MIR3	SINE/MIR	3	129	(139)	2957662
43	0.0	0.0	0.0	chr4	118890698	118890734	(71323821)	+	(TC)n	Simple_repeat	1	37	(0)	2957663
20	0.0	0.0	0.0	chr4	118890735	118890756	(71323799)	+	(GT)n	Simple_repeat	1	22	(0)	2957664
2299	13.2	1.6	9.3	chr4	121699866	121700174	(68514381)	C	MER65A	LTR/ERV1	(0)	445	165	2961417
44	0.0	0.0	0.0	chr4	121700175	121700212	(68514343)	+	(TG)n	Simple_repeat	1	38	(0)	2961418
2299	13.2	1.6	9.3	chr4	121700213	121700385	(68514170)	C	MER65A	LTR/ERV1	(281)	164	1	2961417
469	32.9	17.1	2.0	chr4	123776207	123776500	(66438055)	C	L2	LINE/L2	(830)	2589	2276	2964482
43	2.5	0.0	0.0	chr4	123776501	123776541	(66438014)	+	(GA)n	Simple_repeat	1	41	(0)	2964483
469	32.9	17.1	2.0	chr4	123776542	123776845	(66437710)	C	L2	LINE/L2	(1144)	2275	1882	2964482
67	1.6	1.5	0.0	chr4	128302736	128302800	(61911755)	+	(AG)n	Simple_repeat	1	66	(0)	2970525
499	31.2	5.3	0.6	chr4	128302917	128303129	(61911426)	C	MIRc	SINE/MIR	(27)	241	14	2970526
61	0.0	1.7	1.6	chr4	128553015	128553074	(61661481)	+	(CT)n	Simple_repeat	1	61	(0)	2970885
30	18.1	0.0	0.0	chr4	142405125	142405180	(47809375)	+	GA-rich	Low_complexity	1	56	(0)	2988908
232	28.4	1.1	1.1	chr4	143378466	143378554	(46836001)	C	Tigger16a	DNA/TcMar-Tigger	(444)	513	425	2990239
51	0.0	0.0	0.0	chr4	143378630	143378673	(46835882)	+	(TC)n	Simple_repeat	1	44	(0)	2990242
11	3.1	14.3	2.5	chr4	143378775	143378809	(46835746)	+	(GCCTCTG)n	Simple_repeat	1	40	(0)	2990243
806	28.4	4.3	0.4	chr4	145317531	145317799	(44896756)	+	ERV3-16A3_LTR	LTR/ERVL	128	407	(15)	2992731
41	8.7	1.6	0.0	chr4	145938875	145938935	(44275620)	+	(CT)n	Simple_repeat	1	62	(0)	2993609
29	21.2	1.2	4.8	chr4	145938938	145939020	(44275535)	+	(CA)n	Simple_repeat	1	84	(0)	2993610
42	0.0	0.0	0.0	chr4	154417159	154417204	(35797351)	+	(GT)n	Simple_repeat	1	46	(0)	3005998
56	0.0	0.0	0.0	chr4	154417205	154417252	(35797303)	+	(GA)n	Simple_repeat	1	48	(0)	3005999
1747	16.8	2.9	1.5	chr4	159062680	159062697	(31151858)	C	AluJb	SINE/Alu	(21)	291	274	3012323
31	0.0	0.0	0.0	chr4	159062698	159062724	(31151831)	+	(TC)n	Simple_repeat	1	27	(0)	3012324
1747	16.8	2.9	1.5	chr4	159062725	159062979	(31151576)	C	AluJb	SINE/Alu	(48)	264	14	3012323
66	3.1	0.0	0.0	chr4	159104490	159104554	(31110001)	+	(GA)n	Simple_repeat	1	65	(0)	3012419
24	9.5	0.0	0.0	chr4	159104555	159104588	(31109967)	+	(TG)n	Simple_repeat	1	34	(0)	3012420
36	2.9	0.0	0.0	chr4	159802036	159802070	(30412485)	+	(CT)n	Simple_repeat	1	35	(0)	3013386
15	10.0	0.0	0.0	chr4	159802071	159802092	(30412463)	+	(AC)n	Simple_repeat	1	22	(0)	3013387
248	36.4	3.6	2.6	chr4	159802119	159802310	(30412245)	+	L2b	LINE/L2	2473	2666	(753)	3013385
59	0.0	0.0	0.0	chr4	163244196	163244245	(26970310)	+	(GA)n	Simple_repeat	1	50	(0)	3017770
73	0.0	0.0	0.0	chr5	10508736	10508797	(171029462)	+	(AC)n	Simple_repeat	1	62	(0)	3067025
41	6.0	0.0	0.0	chr5	10508798	10508849	(171029410)	+	(TC)n	Simple_repeat	1	52	(0)	3067026
51	11.3	0.0	0.0	chr5	17217048	17217123	(164321136)	+	(GA)n	Simple_repeat	1	76	(0)	3076465
13	25.7	2.0	2.0	chr5	17217153	17217201	(164321058)	+	G-rich	Low_complexity	1	50	(0)	3076466
1680	18.6	1.5	3.4	chr5	19935335	19935684	(161602575)	+	Tigger3a	DNA/TcMar-Tigger	1	343	(5)	3079988
46	2.3	0.0	0.0	chr5	19935796	19935839	(161602420)	+	(CT)n	Simple_repeat	1	44	(0)	3079989
311	28.9	10.0	5.6	chr5	33443141	33443300	(148094959)	+	MIRb	SINE/MIR	16	172	(36)	3098357
59	1.9	0.0	0.0	chr5	33443307	33443361	(148094898)	+	(CT)n	Simple_repeat	1	55	(0)	3098358
2598	4.7	0.0	2.2	chr5	33443477	33443794	(148094465)	C	AluY	SINE/Alu	(0)	311	1	3098359
360	32.1	4.7	5.3	chr5	33835766	33835852	(147702407)	C	MIRb	SINE/MIR	(108)	160	71	3098954
182	31.1	5.1	9.8	chr5	33835817	33835898	(147702361)	C	L2c	LINE/L2	(36)	3351	3274	3098956
55	0.0	0.0	0.0	chr5	33835908	33835954	(147702305)	+	(TC)n	Simple_repeat	1	47	(0)	3098957
130	2.4	6.4	0.6	chr5	38832047	38832217	(142706042)	+	(CT)n	Simple_repeat	1	182	(0)	3106749
314	27.5	8.4	0.0	chr5	52856433	52856541	(128681718)	C	L3	LINE/CR1	(6)	4093	3975	3119506
40	2.6	0.0	0.0	chr5	52856675	52856713	(128681546)	+	(AG)n	Simple_repeat	1	39	(0)	3119507
918	28.6	12.6	4.4	chr5	52856746	52857195	(128681064)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	58	3119508
63	0.0	0.0	0.0	chr5	64776069	64776122	(116762137)	+	(GA)n	Simple_repeat	1	54	(0)	3136895
2787	13.6	3.5	0.0	chr5	66907020	66907158	(114631101)	C	MER61B	LTR/ERV1	(0)	427	282	3140098
57	0.0	0.0	0.0	chr5	66907159	66907207	(114631052)	+	(GA)n	Simple_repeat	1	49	(0)	3140099
2787	13.6	3.5	0.0	chr5	66907208	66907479	(114630780)	C	MER61B	LTR/ERV1	(146)	281	2	3140098
464	31.2	3.0	3.0	chr5	72386197	72386427	(109151832)	C	MamRep605	LTR?	(50)	799	569	3148909
42	7.8	0.0	0.0	chr5	72386541	72386594	(109151665)	+	(TC)n	Simple_repeat	1	54	(0)	3148910
24	3.3	0.0	0.0	chr5	72386595	72386620	(109151639)	+	(AC)n	Simple_repeat	2	27	(0)	3148911
53	0.0	0.0	0.0	chr5	72720777	72720821	(108817438)	+	(CT)n	Simple_repeat	1	45	(0)	3149425
170	15.5	1.6	3.7	chr5	76699596	76699964	(104838295)	+	(TC)n	Simple_repeat	1	375	(0)	3155423
12	8.6	0.0	6.9	chr5	81852164	81852192	(99686067)	+	(AACA)n	Simple_repeat	1	29	(0)	3163718
382	29.0	6.1	1.6	chr5	91053807	91053932	(90484327)	+	L2b	LINE/L2	3244	3375	(0)	3175560
44	2.4	0.0	0.0	chr5	91054062	91054103	(90484156)	+	(TG)n	Simple_repeat	1	42	(0)	3175561
29	5.6	0.0	0.0	chr5	91054104	91054140	(90484119)	+	(AG)n	Simple_repeat	1	37	(0)	3175562
248	8.6	3.6	0.2	chr5	93581669	93582088	(87956171)	+	(TC)n	Simple_repeat	1	435	(0)	3178828
75	3.5	8.6	0.0	chr5	93583272	93583388	(87954871)	+	(TC)n	Simple_repeat	1	127	(0)	3178832
21	26.9	3.3	3.2	chr5	93583396	93583486	(87954773)	+	(TCT)n	Simple_repeat	1	94	(0)	3178833
63	1.8	0.0	0.0	chr5	96328374	96328431	(85209828)	+	(TC)n	Simple_repeat	1	58	(0)	3182422
366	25.2	15.6	1.9	chr5	102836691	102836844	(78701415)	C	L2a	LINE/L2	(2)	3424	3246	3190635
46	0.0	0.0	0.0	chr5	102836860	102836898	(78701361)	+	(GA)n	Simple_repeat	1	39	(0)	3190636
72	1.5	0.0	0.0	chr5	111531937	111532002	(70006257)	+	(CT)n	Simple_repeat	1	66	(0)	3201567
31	0.0	0.0	0.0	chr5	111532006	111532032	(70006227)	+	(TA)n	Simple_repeat	1	27	(0)	3201568
2381	10.7	1.3	0.0	chr5	111532034	111532341	(70005918)	C	AluSx	SINE/Alu	(0)	312	1	3201569
28	15.6	4.2	4.7	chr5	111757232	111757305	(69780954)	+	G-rich	Low_complexity	1	73	(0)	3201825
24	34.9	0.0	0.0	chr5	111757369	111757454	(69780805)	+	(TC)n	Simple_repeat	1	86	(0)	3201826
2100	11.9	9.8	6.8	chr5	126419121	126419534	(55118725)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3221150
1769	16.3	0.3	1.0	chr5	132787799	132788105	(48750154)	C	AluJb	SINE/Alu	(6)	306	2	3229915
2208	22.9	12.2	10.0	chr5	132788106	132788161	(48750098)	+	LTR102_Mam	LTR/ERVL	545	578	(273)	3229914
67	1.6	0.0	0.0	chr5	132788162	132788223	(48750036)	+	(GA)n	Simple_repeat	1	62	(0)	3229916
2208	22.9	12.2	10.0	chr5	132788224	132788503	(48749756)	+	LTR102_Mam	LTR/ERVL	579	851	(0)	3229914
1418	27.8	3.6	7.3	chr5	135817856	135818054	(45720205)	+	L1MEf	LINE/L1	449	641	(5999)	3234797
77	1.4	0.0	0.0	chr5	135818055	135818124	(45720135)	+	(CT)n	Simple_repeat	1	70	(0)	3234800
3644	23.8	3.3	3.7	chr5	135818125	135819388	(45718871)	+	L1MEf	LINE/L1	642	1791	(4849)	3234797
300	36.4	10.0	2.5	chr5	150449218	150449420	(31088839)	C	MIRb	SINE/MIR	(43)	225	6	3259964
14	18.9	0.0	2.6	chr5	150449424	150449461	(31088798)	+	(CGTGGC)n	Simple_repeat	1	38	(0)	3259965
43	0.0	0.0	0.0	chr5	150701438	150701474	(30836785)	+	(TC)n	Simple_repeat	1	37	(0)	3260548
23	12.6	0.0	0.0	chr5	150701477	150701511	(30836748)	+	(CA)n	Simple_repeat	1	35	(0)	3260549
563	21.1	9.5	2.6	chr5	150701513	150701668	(30836591)	+	MER53	DNA/hAT	26	193	(0)	3260550
62	1.8	0.0	0.0	chr5	151059773	151059829	(30478430)	+	(GA)n	Simple_repeat	1	57	(0)	3261066
35	0.0	0.0	0.0	chr5	151059830	151059867	(30478392)	+	(TG)n	Simple_repeat	1	38	(0)	3261067
73	5.4	6.8	0.0	chr5	159050147	159050263	(22487996)	+	(TC)n	Simple_repeat	1	125	(0)	3275490
2974	12.7	6.9	8.6	chr5	160526692	160526872	(21011387)	+	LTR18B	LTR/ERVL	24	198	(416)	3278337
53	0.0	0.0	0.0	chr5	160526873	160526917	(21011342)	+	(GA)n	Simple_repeat	1	45	(0)	3278338
2974	12.7	6.9	8.6	chr5	160526918	160527337	(21010922)	+	LTR18B	LTR/ERVL	199	614	(0)	3278337
33	0.0	0.0	0.0	chr6	3208682	3208709	(167597270)	+	(AG)n	Simple_repeat	1	28	(0)	3318574
208	28.7	12.2	5.0	chr6	3208830	3208950	(167597029)	C	L2	LINE/L2	(522)	2897	2767	3318575
497	16.8	5.8	3.0	chr6	5777937	5778071	(165027908)	+	L1ME2z	LINE/L1	5918	6056	(108)	3322543
28	0.0	0.0	0.0	chr6	5778072	5778098	(165027881)	+	(T)n	Simple_repeat	1	27	(0)	3322544
54	2.0	0.0	0.0	chr6	5778130	5778180	(165027799)	+	(TC)n	Simple_repeat	1	51	(0)	3322545
862	17.9	2.2	0.0	chr6	5778181	5778314	(165027665)	C	FLAM_C	SINE/Alu	(6)	137	1	3322546
522	19.3	0.8	1.6	chr6	5778318	5778438	(165027541)	+	L1ME2z	LINE/L1	6048	6167	(277)	3322543
391	25.3	16.8	1.3	chr6	7278077	7278232	(163527747)	+	MIRb	SINE/MIR	46	230	(38)	3324872
207	27.0	13.9	5.1	chr6	7278194	7278310	(163527669)	C	L2a	LINE/L2	(13)	3413	3285	3324873
37	0.0	0.0	0.0	chr6	7278330	7278361	(163527618)	+	(TG)n	Simple_repeat	1	32	(0)	3324874
250	8.5	11.3	0.0	chr6	7278362	7278408	(163527571)	C	HERVFH21-int	LTR/ERV1	(6454)	75	23	3324875
2205	8.5	1.1	0.7	chr6	7278417	7278697	(163527282)	C	AluSz	SINE/Alu	(30)	282	1	3324876
2012	28.9	10.9	4.9	chr6	12103842	12104362	(158701617)	C	L1MEg	LINE/L1	(4590)	1494	901	3332197
41	4.2	1.9	1.9	chr6	12104363	12104414	(158701565)	+	(TC)n	Simple_repeat	1	53	(0)	3332198
2012	28.9	10.9	4.9	chr6	12104415	12104431	(158701548)	C	L1MEg	LINE/L1	(5184)	900	888	3332197
1353	18.8	5.3	5.9	chr6	12104432	12104734	(158701245)	C	AluJo	SINE/Alu	(10)	302	2	3332199
35	0.0	5.4	0.0	chr6	14037161	14037197	(156768782)	+	(TC)n	Simple_repeat	1	39	(0)	3335335
943	13.1	0.8	0.0	chr6	14876715	14876844	(155929135)	C	FLAM_C	SINE/Alu	(11)	132	2	3336696
30	7.3	0.8	0.0	chr6	14876845	14876891	(155929088)	+	(TC)n	Simple_repeat	1	47	(0)	3336697
2767	17.4	4.2	0.4	chr6	18326996	18327474	(152478505)	C	MER54B	LTR/ERVL	(0)	793	296	3342880
65	9.7	2.0	0.0	chr6	18327475	18327576	(152478403)	+	(AGAG)n	Simple_repeat	1	104	(0)	3342881
1080	19.8	0.5	0.5	chr6	18327577	18327779	(152478200)	C	MER54B	LTR/ERVL	(490)	303	101	3342880
16	5.3	0.0	0.0	chr6	18749553	18749572	(152056407)	+	(GC)n	Simple_repeat	1	20	(0)	3343525
50	1.7	0.0	0.0	chr6	18749572	18749607	(152056372)	+	(CA)n	Simple_repeat	1	36	(0)	3343526
51	3.9	0.0	0.0	chr6	18749608	18749660	(152056319)	+	(CT)n	Simple_repeat	1	53	(0)	3343527
50	1.7	0.0	0.0	chr6	18749661	18749683	(152056296)	+	(CA)n	Simple_repeat	1	23	(0)	3343528
12	18.8	2.6	2.6	chr6	33272723	33272760	(137533219)	+	(TAAGG)n	Simple_repeat	1	39	(0)	3366117
73	0.0	0.0	0.0	chr6	36734314	36734375	(134071604)	+	(AG)n	Simple_repeat	1	62	(0)	3373183
20	22.2	7.6	2.0	chr6	37697972	37698009	(133107970)	+	(CGCT)n	Simple_repeat	3	99	(0)	3375152
126	6.5	5.1	0.0	chr6	37698157	37698352	(133107627)	+	(TC)n	Simple_repeat	1	206	(0)	3375153
1553	19.8	18.4	1.8	chr6	38697213	38697726	(132108253)	+	LTR87	LTR/ERVL?	13	618	(6)	3376810
69	0.0	0.0	0.0	chr6	41109070	41109128	(129696851)	+	(TC)n	Simple_repeat	1	59	(0)	3380632
21	0.0	0.0	0.0	chr6	41109129	41109151	(129696828)	+	(GT)n	Simple_repeat	1	23	(0)	3380633
192	0.0	0.6	0.0	chr6	42262435	42262600	(128543379)	+	(AG)n	Simple_repeat	1	167	(0)	3382890
54	0.0	0.0	0.0	chr6	47731739	47731784	(123074195)	+	(GA)n	Simple_repeat	1	46	(0)	3392199
287	29.4	8.5	3.2	chr6	62943160	62943282	(107862697)	C	MamGypLTR1d	LTR/Gypsy	(10)	803	674	3409822
41	9.2	0.0	0.0	chr6	62943313	62943370	(107862609)	+	(CT)n	Simple_repeat	1	58	(0)	3409823
1521	20.4	1.2	0.0	chr6	63352382	63352636	(107453343)	+	AluJo	SINE/Alu	1	258	(54)	3410355
25	6.5	0.0	0.0	chr6	63352637	63352669	(107453310)	+	(TC)n	Simple_repeat	1	33	(0)	3410356
41	4.7	0.0	0.0	chr6	63352670	63352713	(107453266)	+	(CA)n	Simple_repeat	1	44	(0)	3410357
40	0.0	0.0	0.0	chr6	75208125	75208168	(95597811)	+	(TC)n	Simple_repeat	1	44	(0)	3425883
70	0.0	0.0	0.0	chr6	75208169	75208228	(95597751)	+	(TG)n	Simple_repeat	1	60	(0)	3425884
9874	11.9	1.6	1.7	chr6	108444486	108445633	(62360346)	C	Tigger1	DNA/TcMar-Tigger	(916)	1502	343	3470648
56	0.0	0.0	0.0	chr6	108445634	108445681	(62360298)	+	(GA)n	Simple_repeat	1	48	(0)	3470649
9874	11.9	1.6	1.7	chr6	108445682	108446034	(62359945)	C	Tigger1	DNA/TcMar-Tigger	(2076)	342	3	3470648
231	28.4	0.0	1.3	chr6	110734348	110734422	(60071557)	C	MLT1J1	LTR/ERVL-MaLR	(3)	441	368	3474200
48	0.0	0.0	0.0	chr6	110734521	110734561	(60071418)	+	(CT)n	Simple_repeat	1	41	(0)	3474201
510	35.0	7.3	8.2	chr6	110734565	110734894	(60071085)	+	L2b	LINE/L2	3031	3357	(18)	3474202
48	4.1	0.0	0.0	chr6	114713880	114713929	(56092050)	+	(GA)n	Simple_repeat	1	50	(0)	3480509
1616	12.3	14.7	2.4	chr6	138946872	138947035	(31858944)	+	THE1D	LTR/ERVL-MaLR	2	211	(170)	3513825
48	0.0	0.0	0.0	chr6	138947036	138947076	(31858903)	+	(CT)n	Simple_repeat	1	41	(0)	3513826
1616	12.3	14.7	2.4	chr6	138947077	138947243	(31858736)	+	THE1D	LTR/ERVL-MaLR	212	381	(0)	3513825
34	0.0	3.0	0.0	chr6	142820290	142820322	(27985657)	+	(CT)n	Simple_repeat	1	34	(0)	3519031
16	7.5	3.6	0.0	chr6	143450810	143450837	(27355142)	+	(GCG)n	Simple_repeat	1	29	(0)	3519895
67	1.6	1.5	0.0	chr6	150674619	150674683	(20131296)	+	(TC)n	Simple_repeat	1	66	(0)	3530573
2194	11.1	0.0	0.0	chr6	150674704	150674982	(20130997)	C	AluSx1	SINE/Alu	(33)	279	1	3530574
617	26.6	12.1	1.7	chr6	156856329	156856582	(13949397)	C	MIR	SINE/MIR	(1)	261	2	3540108
25	0.0	0.0	0.0	chr6	156856673	156856700	(13949279)	+	(CT)n	Simple_repeat	1	28	(0)	3540109
49	0.0	0.0	0.0	chr6	156856701	156856742	(13949237)	+	(CA)n	Simple_repeat	1	42	(0)	3540110
451	26.7	10.1	1.2	chr7	17434818	17434980	(141910993)	+	MamGypsy2-LTR	LTR/Gypsy	5	183	(0)	3583891
41	0.0	0.0	0.0	chr7	29195596	29195630	(130150343)	+	(GA)n	Simple_repeat	1	35	(0)	3601208
18	0.0	0.0	0.0	chr7	29195631	29195650	(130150323)	+	(TG)n	Simple_repeat	1	20	(0)	3601209
18	0.0	0.0	0.0	chr7	29195650	29195669	(130150304)	+	(GA)n	Simple_repeat	1	20	(0)	3601210
52	11.5	0.0	0.0	chr7	30294974	30295050	(129050923)	+	(AG)n	Simple_repeat	1	77	(0)	3602934
60	0.0	0.0	0.0	chr7	30295051	30295101	(129050872)	+	(GT)n	Simple_repeat	1	51	(0)	3602935
92	1.1	2.2	0.0	chr7	30520838	30520927	(128825046)	+	(GA)n	Simple_repeat	1	92	(0)	3603253
1733	22.4	7.4	2.5	chr7	38406469	38406700	(120939273)	+	MLT2B3	LTR/ERVL	1	238	(316)	3615094
65	4.1	2.6	0.0	chr7	38406701	38406776	(120939197)	+	(TC)n	Simple_repeat	1	78	(0)	3615095
1733	22.4	7.3	2.5	chr7	38406777	38407021	(120938952)	+	MLT2B3	LTR/ERVL	239	501	(60)	3615094
109	21.2	2.0	0.4	chr7	41700634	41700881	(117645092)	+	GA-rich	Low_complexity	1	253	(0)	3620215
374	16.3	5.2	1.1	chr7	42889328	42889420	(116456553)	+	MER107	DNA/hAT-Charlie	68	164	(36)	3621810
45	8.3	0.0	0.0	chr7	42889422	42889486	(116456487)	+	(AGAG)n	Simple_repeat	1	65	(0)	3621811
23	0.0	0.0	3.5	chr7	43625749	43625777	(115720196)	+	(AG)n	Simple_repeat	1	29	(0)	3622897
46	0.0	0.0	0.0	chr7	44846025	44846063	(114499910)	+	(AC)n	Simple_repeat	1	39	(0)	3625011
21	3.7	3.6	0.0	chr7	44846064	44846091	(114499882)	+	(GA)n	Simple_repeat	1	29	(0)	3625012
243	33.8	5.2	7.8	chr7	66732858	66733114	(92612859)	+	L2	LINE/L2	2702	2951	(468)	3650692
1996	12.5	2.9	0.3	chr7	73123455	73123757	(86222216)	C	AluSz	SINE/Alu	(1)	311	1	3663866
69	1.6	0.0	0.0	chr7	73123766	73123828	(86222145)	+	(TC)n	Simple_repeat	1	63	(0)	3663867
981	16.2	10.6	9.9	chr7	73123829	73124081	(86221892)	C	AluJb	SINE/Alu	(56)	256	2	3663868
259	13.1	0.0	0.0	chr7	73156078	73156138	(86189835)	C	PRIMA4-int	LTR/ERV1	(7689)	581	521	3663989
79	3.8	0.0	0.0	chr7	73156139	73156219	(86189754)	+	(CT)n	Simple_repeat	1	81	(0)	3663990
53	9.4	0.0	0.0	chr7	73971569	73971647	(85374326)	+	(CTCTCT)n	Simple_repeat	1	79	(0)	3665904
50	0.0	0.0	0.0	chr7	74643845	74643887	(84702086)	+	(AG)n	Simple_repeat	1	43	(0)	3667653
431	11.7	0.0	0.0	chr7	74643960	74644019	(84701954)	+	AluSz6	SINE/Alu	243	302	(10)	3667654
2116	12.9	2.9	0.3	chr7	74932276	74932578	(84413395)	C	AluSz	SINE/Alu	(1)	311	1	3668346
47	0.0	0.0	0.0	chr7	74932584	74932623	(84413350)	+	(CT)n	Simple_repeat	1	40	(0)	3668347
1112	15.8	10.6	9.9	chr7	74932624	74932876	(84413097)	C	AluJb	SINE/Alu	(56)	256	2	3668348
52	2.1	0.0	0.0	chr7	84195005	84195053	(75150920)	+	(AG)n	Simple_repeat	1	49	(0)	3683242
1679	17.8	0.7	1.1	chr7	87589504	87589778	(71756195)	+	AluJb	SINE/Alu	2	275	(37)	3687407
71	12.5	1.6	2.3	chr7	87589786	87589913	(71756060)	+	GA-rich	Low_complexity	1	130	(0)	3687408
15	13.6	0.0	5.6	chr7	91264241	91264276	(68081697)	+	(TCC)n	Simple_repeat	1	36	(0)	3692226
18	22.7	0.0	0.0	chr7	91264494	91264539	(68081434)	+	(GGAGGC)n	Simple_repeat	1	46	(0)	3692227
15567	13.1	5.9	1.4	chr7	117047872	117049923	(42296050)	C	Tigger2	DNA/TcMar-Tigger	(0)	2718	549	3732010
402	21.2	0.0	10.6	chr7	137811154	137811285	(21534688)	C	LTR91	LTR/ERVL	(7)	192	75	3762427
49	7.0	0.0	0.0	chr7	137811326	137811385	(21534588)	+	(TC)n	Simple_repeat	1	60	(0)	3762428
36	6.1	1.9	1.9	chr7	137811386	137811438	(21534535)	+	(AC)n	Simple_repeat	1	54	(0)	3762429
36	4.8	0.0	0.0	chr7	137846118	137846161	(21499812)	+	(CT)n	Simple_repeat	1	44	(0)	3762476
49	0.0	0.0	0.0	chr7	137846162	137846203	(21499770)	+	(CA)n	Simple_repeat	1	42	(0)	3762477
1828	17.1	0.4	0.4	chr7	139729043	139729323	(19616650)	+	AluJb	SINE/Alu	2	282	(30)	3766095
70	0.0	0.0	0.0	chr7	139729325	139729384	(19616589)	+	(GA)n	Simple_repeat	1	60	(0)	3766096
30	0.0	0.0	0.0	chr7	150755610	150755635	(8590338)	+	(AG)n	Simple_repeat	1	26	(0)	3782417
102	11.4	4.0	0.5	chr7	156539622	156539798	(2806175)	+	(CT)n	Simple_repeat	1	184	(0)	3791023
19	4.3	0.0	0.0	chr7	157016593	157016616	(2329357)	+	(GA)n	Simple_repeat	1	24	(0)	3791712
44	0.0	0.0	0.0	chr8	22810878	22810915	(122327721)	+	(GA)n	Simple_repeat	1	38	(0)	3826849
23	10.0	0.0	0.0	chr8	22811069	22811101	(122327535)	+	(CT)n	Simple_repeat	1	33	(0)	3826850
19	14.4	0.0	0.0	chr8	23218136	23218166	(121920470)	+	(GT)n	Simple_repeat	1	31	(0)	3827556
30	10.1	0.0	0.0	chr8	23218166	23218208	(121920428)	+	(GA)n	Simple_repeat	1	43	(0)	3827557
51	0.0	0.0	0.0	chr8	38883713	38883756	(106254880)	+	(CA)n	Simple_repeat	1	44	(0)	3853130
45	5.3	1.7	0.0	chr8	38883769	38883827	(106254809)	+	(GA)n	Simple_repeat	1	60	(0)	3853131
2693	21.9	3.2	0.7	chr8	57223075	57223628	(87915008)	C	HUERS-P3-int	LTR/ERV1	(7619)	1300	642	3875005
50	0.0	0.0	0.0	chr8	57223629	57223671	(87914965)	+	(GA)n	Simple_repeat	1	43	(0)	3875006
2627	23.2	4.7	2.2	chr8	57223672	57224303	(87914333)	C	HUERS-P3-int	LTR/ERV1	(8278)	641	1	3875005
299	25.9	4.0	14.4	chr8	66521727	66521790	(78616846)	+	MIR	SINE/MIR	15	79	(183)	3887532
76	0.0	0.0	0.0	chr8	66521791	66521855	(78616781)	+	(GA)n	Simple_repeat	1	65	(0)	3887533
589	25.1	2.5	4.0	chr8	66521856	66522052	(78616584)	+	MIRc	SINE/MIR	80	261	(7)	3887532
48	4.1	0.0	0.0	chr8	70160653	70160702	(74977934)	+	(GA)n	Simple_repeat	1	50	(0)	3893380
251	26.8	6.7	4.0	chr8	70160736	70160836	(74977800)	+	AmnSINE1	SINE/5S-Deu-L2	322	425	(150)	3893381
361	32.3	4.2	3.7	chr8	71463350	71463513	(73675123)	+	L3	LINE/CR1	3927	4091	(8)	3895234
68	0.0	0.0	0.0	chr8	71463576	71463633	(73675003)	+	(TC)n	Simple_repeat	1	58	(0)	3895235
15	18.3	0.0	3.0	chr8	71463650	71463699	(73674937)	+	(CA)n	Simple_repeat	1	48	(0)	3895236
610	24.7	11.7	11.3	chr8	72418089	72418334	(72720302)	C	L1MCc	LINE/L1	(4660)	2362	2086	3896418
405	20.2	9.6	0.0	chr8	72418340	72418443	(72720193)	+	MLT1F2	LTR/ERVL-MaLR	61	175	(385)	3896420
79	1.4	0.0	0.0	chr8	72418450	72418521	(72720115)	+	(TC)n	Simple_repeat	1	72	(0)	3896421
929	25.3	5.3	0.4	chr8	72418526	72418795	(72719841)	+	MLT1F2	LTR/ERVL-MaLR	276	559	(1)	3896420
4255	7.2	0.7	0.7	chr8	73179796	73180351	(71958285)	C	L1PB2	LINE/L1	(3)	6148	5593	3897582
38	0.0	0.0	0.0	chr8	73180395	73180427	(71958209)	+	(CT)n	Simple_repeat	1	33	(0)	3897583
34	0.0	0.0	0.0	chr8	73180440	73180468	(71958168)	+	(AG)n	Simple_repeat	1	29	(0)	3897584
267	33.0	13.7	5.2	chr8	73180472	73180663	(71957973)	C	MLT1K	LTR/ERVL-MaLR	(238)	357	147	3897581
39	7.9	1.8	0.0	chr8	75408225	75408279	(69730357)	+	(AG)n	Simple_repeat	1	56	(0)	3900916
335	29.9	11.1	8.0	chr8	80163765	80163964	(64974672)	+	L1ME4a	LINE/L1	5718	5924	(200)	3907134
44	2.4	0.0	0.0	chr8	80164014	80164055	(64974581)	+	(GA)n	Simple_repeat	1	42	(0)	3907135
256	33.3	8.9	5.6	chr8	80164109	80164521	(64974115)	+	L1M5	LINE/L1	4606	5033	(1113)	3907136
162	10.5	0.0	0.0	chr8	81842344	81842580	(63296056)	+	(GAGA)n	Simple_repeat	1	237	(0)	3909852
50	0.0	0.0	0.0	chr8	81870835	81870877	(63267759)	+	(TC)n	Simple_repeat	1	43	(0)	3909890
30	0.0	0.0	0.0	chr8	81870878	81870910	(63267726)	+	(GT)n	Simple_repeat	1	33	(0)	3909891
26	18.4	0.0	0.0	chr8	100832515	100832563	(44306073)	+	(CT)n	Simple_repeat	1	49	(0)	3937603
489	18.8	10.5	0.1	chr8	100832644	100832787	(44305849)	C	LTR41C	LTR/ERVL	(0)	758	559	3937604
2022	12.9	4.2	2.7	chr8	104864630	104865003	(40273633)	C	THE1D	LTR/ERVL-MaLR	(0)	381	2	3944374
1373	15.2	0.5	0.9	chr8	108759939	108760149	(36378487)	+	AluSx3	SINE/Alu	49	258	(53)	3949847
55	3.7	0.0	0.0	chr8	108760150	108760205	(36378431)	+	(GA)n	Simple_repeat	1	56	(0)	3949848
93	21.6	1.1	0.0	chr8	119070438	119070628	(26068008)	+	(TC)n	Simple_repeat	1	193	(0)	3964301
54	0.0	0.0	0.0	chr8	123060832	123060877	(22077759)	+	(AC)n	Simple_repeat	1	46	(0)	3971082
40	2.2	0.0	0.0	chr8	123060878	123060923	(22077713)	+	(TC)n	Simple_repeat	1	46	(0)	3971083
38	2.8	0.0	0.0	chr8	128313309	128313345	(16825291)	+	(TC)n	Simple_repeat	1	37	(0)	3981240
471	26.7	14.8	0.0	chr8	128313424	128313584	(16825052)	+	MIRb	SINE/MIR	4	192	(76)	3981241
2276	11.3	0.0	0.0	chr8	130462572	130462871	(14675765)	+	AluSp	SINE/Alu	1	300	(13)	3985091
1247	22.2	3.1	6.5	chr8	130462872	130462921	(14675715)	+	L1ME3	LINE/L1	5815	5869	(293)	3985089
51	2.1	0.0	0.0	chr8	130462922	130462969	(14675667)	+	(GA)n	Simple_repeat	1	48	(0)	3985092
1247	22.2	3.1	6.5	chr8	130462970	130463092	(14675544)	+	L1ME3	LINE/L1	5870	5972	(190)	3985089
31	11.6	0.0	0.0	chr9	4600461	4600507	(133794210)	+	(GA)n	Simple_repeat	1	47	(0)	4015318
2654	13.6	9.8	2.7	chr9	6873303	6873903	(131520814)	C	Tigger1	DNA/TcMar-Tigger	(1346)	1072	428	4018922
65	4.5	0.0	0.0	chr9	6873904	6873972	(131520745)	+	(GA)n	Simple_repeat	1	69	(0)	4018925
1688	18.4	5.6	0.0	chr9	6873973	6874293	(131520424)	C	Tigger1	DNA/TcMar-Tigger	(2076)	342	3	4018922
44	0.0	0.0	0.0	chr9	7052864	7052901	(131341816)	+	(AG)n	Simple_repeat	1	38	(0)	4019176
47	0.0	0.0	0.0	chr9	21990612	21990651	(116404066)	+	(GA)n	Simple_repeat	1	40	(0)	4039964
307	31.8	14.6	0.9	chr9	21990705	21990917	(116403800)	C	L1M5	LINE/L1	(276)	5848	5602	4039965
70	4.5	3.2	1.0	chr9	23850730	23850822	(114543895)	+	(TC)n	Simple_repeat	1	96	(0)	4042354
20	4.2	0.0	0.0	chr9	23850842	23850866	(114543851)	+	(CA)n	Simple_repeat	1	25	(0)	4042355
47	0.0	0.0	0.0	chr9	33859761	33859800	(104534917)	+	(TG)n	Simple_repeat	1	40	(0)	4056147
17	0.0	0.0	0.0	chr9	33859801	33859819	(104534898)	+	(AG)n	Simple_repeat	1	19	(0)	4056148
1830	18.1	0.4	2.1	chr9	33859820	33860106	(104534611)	C	AluJr	SINE/Alu	(30)	282	1	4056149
3654	6.4	0.2	0.0	chr9	62800851	62801305	(75593412)	+	LTR2	LTR/ERV1	8	463	(0)	4073673
54	29.2	1.5	2.5	chr9	62801310	62801506	(75593211)	+	GA-rich	Low_complexity	1	200	(0)	4073674
2191	15.6	1.5	8.7	chr9	71955300	71955734	(66438983)	C	MER57B2	LTR/ERV1	(0)	403	1	4085567
45	1.8	3.3	1.6	chr9	84821800	84821859	(53572858)	+	(AG)n	Simple_repeat	1	62	(0)	4105296
31	3.3	0.0	0.0	chr9	87495141	87495171	(50899546)	+	(AG)n	Simple_repeat	1	31	(0)	4109597
663	25.3	3.1	4.0	chr9	87495172	87495361	(50899356)	C	MLT1F1	LTR/ERVL-MaLR	(380)	189	1	4109596
258	31.5	5.3	0.9	chr9	87495404	87495512	(50899205)	C	MIRb	SINE/MIR	(141)	127	14	4109598
340	23.4	10.0	5.8	chr9	88577446	88577653	(49817064)	C	MLT1B	LTR/ERVL-MaLR	(17)	391	189	4111441
362	22.3	9.2	8.2	chr9	88577680	88577850	(49816867)	C	MLT1B	LTR/ERVL-MaLR	(217)	173	1	4111441
49	0.0	0.0	0.0	chr9	91100132	91100173	(47294544)	+	(TC)n	Simple_repeat	1	42	(0)	4114698
334	20.4	5.4	5.4	chr9	98163520	98163612	(40231105)	C	MIRb	SINE/MIR	(83)	185	93	4125955
25	3.5	0.0	0.0	chr9	98163712	98163741	(40230976)	+	(GT)n	Simple_repeat	1	30	(0)	4125956
47	4.2	0.0	0.0	chr9	98163742	98163790	(40230927)	+	(GA)n	Simple_repeat	1	49	(0)	4125957
989	30.7	12.4	4.7	chr9	99535467	99536187	(38858530)	C	L3	LINE/CR1	(1359)	2740	1957	4128655
40	2.6	0.0	0.0	chr9	105883601	105883639	(32511078)	+	(TC)n	Simple_repeat	1	39	(0)	4138160
382	19.0	2.5	1.2	chr9	105883670	105883749	(32510968)	+	L2b	LINE/L2	3288	3368	(7)	4138161
77	12.9	3.7	0.0	chr9	106863000	106863135	(31531582)	+	GA-rich	Low_complexity	1	141	(0)	4139694
85	1.3	0.0	0.0	chr9	106864040	106864116	(31530601)	+	(CT)n	Simple_repeat	1	77	(0)	4139698
17	16.4	0.0	0.0	chr9	106864157	106864190	(31530527)	+	(GCT)n	Simple_repeat	1	34	(0)	4139699
214	30.3	10.7	0.9	chr9	114697505	114697614	(23697103)	C	MIR	SINE/MIR	(14)	248	127	4154254
184	28.4	13.4	0.0	chr9	114697764	114697879	(23696838)	+	MIR3	SINE/MIR	71	204	(4)	4154247
636	24.2	6.7	4.4	chr9	119045391	119045593	(19349124)	C	MIRb	SINE/MIR	(8)	260	53	4162248
35	0.0	0.0	0.0	chr9	130189880	130189909	(8204808)	+	(AT)n	Simple_repeat	1	30	(0)	4184516
38	0.0	0.0	0.0	chr9	130190033	130190065	(8204652)	+	(AG)n	Simple_repeat	1	33	(0)	4184517
308	25.8	3.6	11.4	chr9	130190175	130190323	(8204394)	C	L2c	LINE/L2	(3)	3384	3248	4184518
57	0.0	0.0	0.0	chrX	1047697	1047745	(154993150)	+	(TC)n	Simple_repeat	1	49	(0)	4359999
38	5.0	0.0	0.0	chrX	10011581	10011622	(146029273)	+	(CA)n	Simple_repeat	1	42	(0)	4375796
43	2.5	0.0	0.0	chrX	10011624	10011664	(146029231)	+	(AG)n	Simple_repeat	1	41	(0)	4375797
47	0.0	0.0	0.0	chrX	13026095	13026134	(143014761)	+	(GA)n	Simple_repeat	1	40	(0)	4380500
46	2.3	0.0	0.0	chrX	23742214	23742257	(132298638)	+	(GA)n	Simple_repeat	1	44	(0)	4397947
276	21.1	8.4	2.6	chrX	24171684	24171761	(131869134)	C	MLT1O	LTR/ERVL-MaLR	(52)	490	408	4398991
48	0.0	4.2	0.0	chrX	24171895	24171942	(131868953)	+	(AG)n	Simple_repeat	1	50	(0)	4398992
1287	27.4	1.5	2.8	chrX	39888465	39888934	(116151961)	+	L1MEh	LINE/L1	633	1096	(1139)	4421384
44	0.0	0.0	0.0	chrX	39889108	39889145	(116151750)	+	(TC)n	Simple_repeat	1	38	(0)	4421386
2247	6.7	0.7	1.8	chrX	40793824	40794107	(115246788)	+	AluSp	SINE/Alu	1	281	(32)	4423107
69	0.0	0.0	0.0	chrX	40794112	40794170	(115246725)	+	(AG)n	Simple_repeat	1	59	(0)	4423108
11808	14.7	0.2	1.3	chrX	40794171	40794362	(115246533)	C	MER52-int	LTR/ERV1	(2050)	5041	4859	4423106
544	29.4	9.6	0.8	chrX	42989835	42990081	(113050814)	C	LTR86A2	LTR/ERVL	(78)	430	160	4426725
42	0.0	0.0	0.0	chrX	42990084	42990119	(113050776)	+	(TC)n	Simple_repeat	1	36	(0)	4426726
31	0.0	0.0	0.0	chrX	42990120	42990153	(113050742)	+	(AC)n	Simple_repeat	1	34	(0)	4426727
17	0.0	0.0	0.0	chrX	50204659	50204677	(105836218)	+	(A)n	Simple_repeat	1	19	(0)	4439056
18	0.0	0.0	0.0	chrX	50204816	50204835	(105836060)	+	(CT)n	Simple_repeat	1	20	(0)	4439057
13	21.3	0.0	0.0	chrX	50204850	50204882	(105836013)	+	(TTTTG)n	Simple_repeat	1	33	(0)	4439058
85	3.6	0.0	0.0	chrX	71255085	71255170	(84785725)	+	(TC)n	Simple_repeat	1	86	(0)	4461123
36	22.6	2.2	1.1	chrX	71255181	71255270	(84785625)	+	(CT)n	Simple_repeat	1	92	(0)	4461124
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
27	0.0	0.0	0.0	chrX	78957358	78957387	(77083508)	+	(AC)n	Simple_repeat	1	30	(0)	4470378
37	0.0	0.0	0.0	chrX	78957388	78957419	(77083476)	+	(AG)n	Simple_repeat	1	32	(0)	4470379
107	11.7	3.7	0.5	chrX	80809684	80809870	(75231025)	+	GA-rich	Low_complexity	1	194	(0)	4472223
21948	11.8	1.7	0.8	chrX	101770227	101774400	(54266495)	C	L1MA1	LINE/L1	(1581)	5984	1767	4496464
38	0.0	0.0	0.0	chrX	101774401	101774433	(54266462)	+	(TC)n	Simple_repeat	1	33	(0)	4496467
21027	15.8	2.6	0.8	chrX	101774434	101776150	(54264745)	C	L1MA1	LINE/L1	(5799)	1766	15	4496464
64	1.7	0.0	0.0	chrX	107742261	107742319	(48298576)	+	(GA)n	Simple_repeat	1	59	(0)	4504742
28	19.5	1.6	0.0	chrX	107742346	107742406	(48298489)	+	G-rich	Low_complexity	1	62	(0)	4504743
44	4.5	0.0	0.0	chrX	115594623	115594669	(40446226)	+	(CT)n	Simple_repeat	1	47	(0)	4515805
26	3.0	2.9	0.0	chrX	115594670	115594703	(40446192)	+	(AC)n	Simple_repeat	1	35	(0)	4515806
50	0.0	0.0	0.0	chrX	115615488	115615530	(40425365)	+	(AG)n	Simple_repeat	1	43	(0)	4515849
248	18.4	6.2	2.6	chrX	118053685	118053762	(37987133)	+	L1ME3G	LINE/L1	66	146	(778)	4518474
30	0.0	0.0	0.0	chrX	118053766	118053798	(37987097)	+	(TG)n	Simple_repeat	1	33	(0)	4518475
102	0.0	3.1	0.0	chrX	118053799	118053895	(37987000)	+	(GA)n	Simple_repeat	1	100	(0)	4518476
18	0.0	0.0	0.0	chrX	120015556	120015575	(36025320)	+	(TG)n	Simple_repeat	1	20	(0)	4522331
67	6.8	2.1	0.0	chrX	120015575	120015667	(36025228)	+	(GA)n	Simple_repeat	1	95	(0)	4522332
43	14.5	0.0	0.0	chrX	120309670	120309745	(35731150)	+	(CTCTCT)n	Simple_repeat	1	76	(0)	4522742
16	12.1	3.6	0.0	chrX	120309745	120309772	(35731123)	+	(TG)n	Simple_repeat	1	29	(0)	4522743
48	0.0	0.0	0.0	chrX	123184095	123184135	(32856760)	+	(TC)n	Simple_repeat	1	41	(0)	4526383
31	35.2	2.4	2.8	chrX	123184217	123184422	(32856473)	+	G-rich	Low_complexity	1	211	(0)	4526384
13	26.5	2.2	0.0	chrX	129952734	129952778	(26088117)	+	(TGTC)n	Simple_repeat	1	46	(0)	4535648
14	20.7	2.6	0.0	chrX	129952760	129952798	(26088097)	+	(CTCG)n	Simple_repeat	1	40	(0)	4535649
66	0.0	0.0	0.0	chrX	129952799	129952854	(26088041)	+	(CT)n	Simple_repeat	1	56	(0)	4535650
34	0.0	0.0	0.0	chrX	134161282	134161310	(21879585)	+	(AC)n	Simple_repeat	1	29	(0)	4542184
24	0.0	0.0	0.0	chrX	134161311	134161337	(21879558)	+	(GA)n	Simple_repeat	1	27	(0)	4542185
26	22.2	0.0	0.0	chrX	136673816	136673869	(19367026)	+	(CT)n	Simple_repeat	1	54	(0)	4546397
2144	12.1	1.0	0.0	chrX	136673874	136674163	(19366732)	C	AluSz	SINE/Alu	(17)	295	3	4546398
443	25.3	7.1	4.5	chrX	140761977	140762154	(15278741)	+	MIRc	SINE/MIR	85	267	(1)	4552753
40	0.0	0.0	0.0	chrX	140762210	140762243	(15278652)	+	(AG)n	Simple_repeat	1	34	(0)	4552754