13	21.7	0.0	2.6	chr1	923702	923740	(248032682)	+	(AGCCC)n	Simple_repeat	1	39	(0)	1178
17	18.9	4.0	1.9	chr1	941911	941960	(248014462)	+	(CCG)n	Simple_repeat	1	52	(0)	1190
16	24.5	1.6	3.2	chr1	1375060	1375120	(247581302)	+	(GCCCGGC)n	Simple_repeat	1	62	(0)	1639
633	15.8	5.8	1.4	chr1	3650290	3650437	(245305985)	+	MER53	DNA/hAT	22	176	(17)	4182
12	23.5	1.8	5.4	chr1	8703038	8703092	(240253330)	+	(GGCCGCT)n	Simple_repeat	1	56	(0)	12084
2020	6.0	2.0	8.2	chr1	8877574	8877891	(240078531)	+	AluSp	SINE/Alu	1	298	(15)	12445
15	21.8	0.0	5.7	chr1	8878056	8878108	(240078314)	+	(GCGCGG)n	Simple_repeat	1	53	(0)	12446
13	24.2	0.0	5.6	chr1	11934632	11934685	(237021737)	+	(GGCGG)n	Simple_repeat	1	54	(0)	18776
14	21.9	2.3	2.2	chr1	11934781	11934824	(237021598)	+	(TGC)n	Simple_repeat	1	45	(0)	18777
278	22.5	9.0	0.0	chr1	11979584	11979654	(236976768)	C	MER33	DNA/hAT-Charlie	(237)	87	10	18888
597	5.4	0.0	0.0	chr1	16727285	16727358	(232229064)	+	tRNA-Gly-GGG	tRNA	1	74	(0)	28015
2188	10.7	1.9	1.9	chr1	16964373	16964680	(231991742)	C	AluSg	SINE/Alu	(0)	310	3	28380
2144	12.3	1.0	0.0	chr1	16964681	16964980	(231991442)	C	AluSx	SINE/Alu	(9)	303	1	28381
309	24.0	13.8	2.9	chr1	23019090	23019192	(225937230)	+	L2c	LINE/L2	3272	3387	(0)	41474
860	25.4	2.5	15.6	chr1	23097335	23097569	(225858853)	C	L2	LINE/L2	(640)	2779	2568	41588
1401	18.2	7.3	4.3	chr1	23097570	23097849	(225858573)	+	AluJo	SINE/Alu	2	290	(22)	41589
198	18.6	11.5	0.0	chr1	23539786	23539852	(225416570)	+	MIR3	SINE/MIR	69	158	(72)	42683
11	21.7	0.0	2.9	chr1	23980380	23980414	(224976008)	+	(CTCCAC)n	Simple_repeat	1	35	(0)	43830
371	32.7	5.3	1.8	chr1	27858305	27858469	(221097953)	C	MIRb	SINE/MIR	(48)	220	50	52686
384	29.4	2.7	2.7	chr1	28648880	28649025	(220307397)	+	AluJr4	SINE/Alu	11	156	(156)	54782
16	22.6	0.0	0.0	chr1	29237551	29237583	(219718839)	+	(GT)n	Simple_repeat	1	33	(0)	56236
411	27.5	8.7	7.7	chr1	34598063	34598290	(214358132)	+	LTR88b	LTR/Gypsy?	631	851	(11)	67054
344	26.7	3.2	0.0	chr1	34859978	34860067	(214096355)	C	L2c	LINE/L2	(5)	3382	3290	67556
14	16.4	3.1	9.0	chr1	36088871	36088935	(212867487)	+	(GCGGCA)n	Simple_repeat	1	67	(0)	70109
384	29.2	2.6	0.0	chr1	36188440	36188552	(212767870)	+	MIRb	SINE/MIR	46	161	(107)	70314
465	27.5	16.3	0.9	chr1	36398030	36398345	(212558077)	C	L2a	LINE/L2	(1)	3425	3052	70782
2001	13.0	1.3	1.0	chr1	40338407	40338713	(208617709)	C	AluSx	SINE/Alu	(4)	308	1	78622
614	34.6	4.7	1.8	chr1	41503862	41504188	(207452234)	+	MLT1I	LTR/ERVL-MaLR	73	409	(2)	80935
17	26.3	3.1	1.5	chr1	42335243	42335307	(206621115)	+	(CCG)n	Simple_repeat	1	67	(0)	82310
1906	12.3	18.2	2.8	chr1	45266083	45266586	(203689836)	C	LTR18B	LTR/ERVL	(27)	587	1	87629
334	22.6	7.0	2.8	chr1	45266686	45266794	(203689628)	+	MLT1F	LTR/ERVL-MaLR	406	519	(23)	87630
234	23.1	1.0	11.9	chr1	45339770	45339887	(203616535)	+	L2c	LINE/L2	3059	3163	(212)	87767
307	25.0	19.0	1.5	chr1	47710396	47710525	(201245897)	C	MIRc	SINE/MIR	(104)	164	7	92155
418	27.6	13.0	0.7	chr1	47710931	47711065	(201245357)	C	MIRc	SINE/MIR	(71)	197	44	92156
2018	12.3	1.4	0.0	chr1	53944364	53944656	(195011766)	+	AluSx1	SINE/Alu	2	298	(14)	104096
242	28.5	13.2	6.9	chr1	55752949	55753332	(193203090)	C	L1MEd	LINE/L1	(1624)	4522	4117	107677
15	18.6	3.4	9.8	chr1	55753363	55753453	(193202969)	+	(TTTTCA)n	Simple_repeat	1	85	(0)	107679
14	13.6	0.0	5.6	chr1	58783956	58783991	(190172431)	+	(CTGG)n	Simple_repeat	1	36	(0)	113506
2268	11.9	0.0	0.0	chr1	59814046	59814356	(189142066)	C	AluSx	SINE/Alu	(1)	311	1	115493
27	19.4	3.1	0.0	chr1	61077349	61077413	(187879009)	+	(AGCG)n	Simple_repeat	1	67	(0)	117645
332	31.1	0.8	2.9	chr1	63853968	63854103	(185102319)	+	MIR3	SINE/MIR	75	207	(1)	122827
388	21.8	12.8	3.7	chr1	64341028	64341165	(184615257)	C	MLT1J2	LTR/ERVL-MaLR	(35)	477	263	123710
246	29.2	12.0	4.5	chr1	64341294	64341447	(184614975)	C	MLT1J2	LTR/ERVL-MaLR	(343)	169	3	123710
1615	17.6	8.4	0.0	chr1	65084369	65084652	(183871770)	C	AluJb	SINE/Alu	(1)	311	2	125062
2479	15.7	9.8	10.5	chr1	65572681	65573299	(183383123)	C	LTR18B	LTR/ERVL	(0)	614	1	125986
16	20.4	6.8	1.6	chr1	66924885	66924943	(182031479)	+	GA-rich	Low_complexity	1	63	(0)	127976
487	31.5	12.7	5.8	chr1	70079646	70079698	(178876724)	C	MIRb	SINE/MIR	(8)	260	211	132830
925	22.0	0.6	0.0	chr1	70079699	70079875	(178876547)	+	MER45A	DNA/hAT-Tip100	1	178	(0)	132831
487	31.5	12.7	5.8	chr1	70079876	70080047	(178876375)	C	MIRb	SINE/MIR	(58)	210	17	132830
14	14.6	0.0	3.1	chr1	77683302	77683333	(171273089)	+	(CGC)n	Simple_repeat	1	32	(0)	143293
18	24.2	0.0	3.5	chr1	77683479	77683535	(171272887)	+	(GGC)n	Simple_repeat	1	57	(0)	143294
501	24.6	9.1	1.5	chr1	84912331	84912462	(164043960)	C	LTR16B2	LTR/ERVL	(319)	143	1	153304
1861	22.4	6.2	1.7	chr1	84912476	84912948	(164043474)	+	L1MC4	LINE/L1	7347	7842	(200)	153305
21	29.4	0.0	0.0	chr1	85201169	85201234	(163755188)	+	(TCG)n	Simple_repeat	1	66	(0)	153784
4156	25.4	5.7	5.2	chr1	88736655	88736845	(160219577)	C	L1M1	LINE/L1	(5465)	2100	1897	158895
313	29.2	0.0	0.4	chr1	90081116	90081202	(158875220)	+	L2a	LINE/L2	3287	3422	(4)	160828
615	34.9	4.9	7.4	chr1	90081298	90081718	(158874704)	+	L2b	LINE/L2	2948	3357	(18)	160827
18	30.7	1.3	2.5	chr1	93909334	93909412	(155047010)	+	(CGG)n	Simple_repeat	1	80	(0)	167024
530	18.4	13.2	0.8	chr1	109619564	109619719	(139336703)	C	MIR	SINE/MIR	(1)	261	87	188863
19	9.2	8.3	1.9	chr1	109619788	109619835	(139336587)	+	(GGCGGA)n	Simple_repeat	1	52	(0)	188864
217	37.2	6.5	3.9	chr1	111937922	111938100	(137018322)	+	L2a	LINE/L2	2820	3003	(416)	192339
14	19.7	1.9	5.7	chr1	112675192	112675243	(136281179)	+	(CCGCC)n	Simple_repeat	1	53	(0)	193562
257	26.4	5.2	4.2	chr1	145845402	145845496	(103110926)	C	L3	LINE/CR1	(1626)	2473	2378	211637
2957	15.7	9.8	1.2	chr1	147717143	147717703	(101238719)	+	LTR18B	LTR/ERVL	1	614	(0)	214517
2949	15.8	10.6	1.1	chr1	147719122	147719676	(101236746)	+	LTR18B	LTR/ERVL	1	614	(0)	214520
12	19.4	4.7	2.2	chr1	156489172	156489214	(92467208)	+	(GCTGCAG)n	Simple_repeat	1	45	(0)	230227
17	20.4	1.9	3.6	chr1	160400510	160400563	(88555859)	+	(CCCCCG)n	Simple_repeat	1	55	(0)	235700
30605	6.4	0.4	0.4	chr1	161473230	161478266	(87478156)	+	HERV9NC-int	LTR/ERV1	40	5284	(834)	237606
591	35.4	5.8	0.0	chr1	162215496	162215769	(86740653)	C	LTR88c	LTR/Gypsy?	(561)	301	11	238759
16	11.6	0.0	0.0	chr1	167926611	167926638	(81029784)	+	(CTG)n	Simple_repeat	1	28	(0)	247552
431	13.5	0.0	0.0	chr1	167926639	167926712	(81029710)	+	MER20	DNA/hAT-Charlie	93	166	(53)	247553
274	32.0	14.9	5.5	chr1	167926762	167927052	(81029370)	+	L2c	LINE/L2	3007	3329	(58)	247554
2683	14.6	16.3	2.6	chr1	171616765	171617292	(77339130)	+	LTR18B	LTR/ERVL	1	614	(0)	253021
1432	23.5	18.1	5.9	chr1	171644992	171645650	(77310772)	+	LTR41B	LTR/ERVL	1	757	(1)	253080
292	26.8	6.1	4.4	chr1	181354071	181354230	(67602192)	+	L2a	LINE/L2	3263	3425	(1)	267851
12	12.2	3.7	0.0	chr1	182391717	182391743	(66564679)	+	GA-rich	Low_complexity	1	28	(0)	269390
11	19.1	2.1	6.2	chr1	182615102	182615148	(66341274)	+	(CGGCCG)n	Simple_repeat	1	48	(0)	269753
2218	14.6	7.0	6.6	chr1	186079125	186079622	(62876800)	C	LTR18B	LTR/ERVL	(114)	500	1	275137
720	18.8	2.8	0.0	chr1	200357150	200357287	(48599135)	C	FRAM	SINE/Alu	(3)	173	32	294100
304	21.3	3.1	0.0	chr1	200357332	200357425	(48598997)	C	Charlie2b	DNA/hAT-Charlie	(252)	2530	2434	294101
247	24.1	0.0	0.0	chr1	202236638	202236691	(46719731)	+	L2b	LINE/L2	3313	3366	(9)	297540
46	12.3	0.0	0.0	chr1	203306796	203306875	(45649547)	+	(AC)n	Simple_repeat	1	80	(0)	299386
3407	14.2	7.2	0.5	chr1	207420882	207421454	(41534968)	C	LTR18B	LTR/ERVL	(0)	614	1	306633
3059	12.6	5.0	0.4	chr1	207425130	207425638	(41530784)	C	LTR18B	LTR/ERVL	(76)	538	5	306636
1366	13.4	3.5	0.0	chr1	207425642	207425865	(41530557)	C	THE1D	LTR/ERVL-MaLR	(149)	232	1	306632
45	2.4	0.0	0.0	chr1	207824032	207824074	(41132348)	+	(CT)n	Simple_repeat	1	43	(0)	307172
13	22.0	2.2	2.2	chr1	212665501	212665545	(36290877)	+	(CTCTTCC)n	Simple_repeat	1	46	(0)	314923
16	25.2	1.7	3.3	chr1	224114132	224114191	(24842231)	+	(GGC)n	Simple_repeat	1	61	(0)	331817
2202	11.8	3.9	1.4	chr1	224634986	224635356	(24321066)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	332904
3239	16.1	5.7	0.2	chr1	225462619	225463184	(23493238)	+	LTR26	LTR/ERV1	5	603	(0)	334009
200	30.8	10.1	3.6	chr1	225777463	225777600	(23178822)	+	L2c	LINE/L2	3231	3378	(9)	334567
1740	33.2	6.3	8.6	chr1	228130971	228131440	(20824982)	+	ERV24_Prim-int	LTR/ERV1	4131	4624	(2951)	338319
249	20.6	8.5	5.8	chr1	229225493	229225595	(19730827)	C	MER129	LTR?	(168)	301	196	339893
17	9.3	2.8	2.7	chr1	232630156	232630191	(16326231)	+	(CCGC)n	Simple_repeat	1	37	(0)	345179
958	15.8	0.6	1.8	chr1	236063641	236063804	(12892618)	+	FRAM	SINE/Alu	1	162	(14)	350911
284	14.6	3.5	0.0	chr1	236063806	236063860	(12892562)	+	Charlie4a	DNA/hAT-Charlie	430	486	(22)	350912
15	4.8	0.0	0.0	chr1	236065014	236065035	(12891387)	+	(CAG)n	Simple_repeat	1	22	(0)	350913
1198	21.0	12.8	5.2	chr1	241423790	241424236	(7532186)	+	MER52D	LTR/ERV1	3	488	(1635)	359283
320	30.9	1.0	1.0	chr1	244139901	244139998	(4816424)	C	MIR3	SINE/MIR	(4)	204	107	363636
15	5.6	0.0	0.0	chr10	1049464	1049482	(132747940)	+	(C)n	Simple_repeat	1	19	(0)	372220
1759	22.4	2.0	1.8	chr10	5291581	5291975	(128505447)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	377511
3726	11.1	6.3	3.9	chr10	5856198	5856795	(127940627)	+	LTR18B	LTR/ERVL	1	614	(0)	378454
429	35.0	7.6	5.7	chr10	10769796	10770249	(123027173)	C	L2b	LINE/L2	(541)	2878	2416	386072
346	26.9	11.6	0.4	chr10	15585222	15585364	(118212058)	+	MIR	SINE/MIR	2	172	(36)	394517
1854	9.7	1.4	4.2	chr10	16437335	16437622	(117359800)	C	AluJo	SINE/Alu	(11)	301	22	395816
402	25.5	3.0	6.2	chr10	21278701	21278881	(112518541)	C	MIR3	SINE/MIR	(30)	178	5	403309
982	21.8	1.9	0.9	chr10	21279053	21279265	(112518157)	C	MER58B	DNA/hAT-Charlie	(0)	341	127	403310
12	18.4	0.0	9.6	chr10	21496082	21496133	(112301289)	+	(CCCT)n	Simple_repeat	1	52	(0)	403844
345	27.9	8.9	15.0	chr10	30414059	30414258	(103383164)	C	MamGypLTR3a	LTR/Gypsy	(159)	822	639	418656
320	23.0	20.2	1.7	chr10	30414273	30414449	(103382973)	C	MIRb	SINE/MIR	(8)	260	43	418658
1473	24.9	14.8	2.7	chr10	44865190	44865960	(88931462)	+	L1MEc	LINE/L1	48	927	(5473)	435328
3170	11.3	12.9	0.4	chr10	52440712	52441234	(81356188)	+	LTR18B	LTR/ERVL	2	599	(15)	446304
387	31.3	7.5	0.7	chr10	61816338	61816528	(71980894)	+	MIRb	SINE/MIR	1	223	(45)	459090
20	24.9	1.8	0.0	chr10	67885083	67885139	(65912283)	+	(ACG)n	Simple_repeat	1	58	(0)	468132
569	3.2	0.0	0.0	chr10	68472182	68472243	(65325179)	C	AluYa5	SINE/Alu	(99)	212	151	469298
404	26.1	6.9	0.0	chr10	71860652	71860785	(61936637)	C	Charlie4z	DNA/hAT-Charlie	(19)	148	5	476035
3096	14.5	8.0	6.5	chr10	80152519	80153122	(53644300)	C	LTR18B	LTR/ERVL	(0)	614	1	490761
28	0.0	0.0	0.0	chr10	93702523	93702548	(40094874)	+	(CCG)n	Simple_repeat	1	26	(0)	511624
40	0.0	2.4	2.3	chr10	96229655	96229696	(37567726)	+	(TG)n	Simple_repeat	1	43	(0)	515592
318	20.2	19.3	3.7	chr10	96229886	96230054	(37567368)	+	MIR3	SINE/MIR	6	192	(16)	515593
1652	18.5	1.4	2.1	chr10	102494352	102494638	(31302784)	+	AluJb	SINE/Alu	2	286	(26)	527031
1648	12.1	0.3	15.2	chr10	102494639	102494673	(31302749)	+	AluSz	SINE/Alu	134	133	(179)	527030
1596	15.2	6.0	4.4	chr10	102494674	102494800	(31302622)	+	AluJr	SINE/Alu	1	123	(189)	527032
414	29.9	7.5	2.1	chr10	109933004	109933191	(23864231)	C	MIR3	SINE/MIR	(4)	204	6	538622
382	30.6	7.7	5.8	chr10	109933301	109933402	(23864020)	+	MER102b	DNA/hAT-Charlie	22	122	(219)	538623
240	29.5	1.3	1.3	chr10	110916520	110916598	(22880824)	C	AmnSINE1	SINE/5S-Deu-L2	(181)	394	316	540368
1778	12.3	1.0	8.2	chr10	113073395	113073710	(20723712)	+	AluJo	SINE/Alu	11	303	(9)	543742
14	9.3	0.0	0.0	chr10	114916636	114916658	(18880764)	+	(AAC)n	Simple_repeat	1	23	(0)	546766
1382	15.7	0.9	2.5	chr10	114916726	114916961	(18880461)	C	LTR18B	LTR/ERVL	(382)	232	1	546767
12	24.2	3.5	3.4	chr10	121975232	121975288	(11822134)	+	(GCGCCA)n	Simple_repeat	1	59	(0)	558056
1840	21.4	7.3	6.6	chr10	122306037	122306407	(11491015)	+	MLT1D	LTR/ERVL-MaLR	117	505	(0)	558650
317	34.0	3.2	1.9	chr10	122306413	122306577	(11490845)	C	MIR	SINE/MIR	(70)	192	33	558649
189	31.0	9.4	0.0	chr10	122306535	122306621	(11490801)	+	MIR3	SINE/MIR	30	125	(83)	558653
736	19.9	4.2	0.6	chr10	122306622	122306783	(11490639)	C	MER96B	DNA/hAT-Tip100	(0)	417	250	558654
299	19.6	4.7	1.5	chr10	124349118	124349191	(9448231)	+	MIR	SINE/MIR	86	164	(44)	561740
1581	19.3	0.7	0.0	chr10	125473212	125473501	(8323921)	C	MER90a	LTR/ERV1	(0)	614	323	563576
2762	17.3	1.2	9.4	chr10	130463627	130464282	(3333140)	C	LTR18B	LTR/ERVL	(13)	601	1	569554
17	23.6	0.0	5.0	chr11	1309629	1309688	(133776934)	+	(CCGCC)n	Simple_repeat	1	60	(0)	574452
934	15.2	5.3	3.3	chr11	20856922	20857105	(114229517)	+	LTR18B	LTR/ERVL	1	188	(426)	604581
1283	14.2	8.4	6.8	chr11	20857118	20857397	(114229225)	+	LTR18B	LTR/ERVL	330	614	(0)	604581
2597	15.4	11.4	3.4	chr11	28324796	28325332	(106761290)	C	LTR18B	LTR/ERVL	(26)	588	3	615359
1967	18.6	7.5	10.7	chr11	30044711	30045318	(105041304)	+	LTR18B	LTR/ERVL	1	587	(27)	617867
2349	17.9	9.1	7.3	chr11	38324102	38324703	(96761919)	+	LTR18B	LTR/ERVL	1	614	(0)	631033
1323	23.3	14.1	0.0	chr11	48150214	48150518	(86936104)	C	LTR18A	LTR/ERVL	(0)	357	3	647664
275	27.6	4.5	6.6	chr11	69915629	69915764	(65170858)	+	MIRb	SINE/MIR	5	137	(131)	675949
296	34.0	2.9	0.0	chr11	72782973	72783072	(62303550)	+	MIR3	SINE/MIR	104	206	(2)	680581
23	28.2	0.0	0.0	chr11	92886329	92886388	(42200234)	+	(GT)n	Simple_repeat	1	60	(0)	714799
2525	13.3	16.9	5.2	chr11	102620813	102621350	(32465272)	C	LTR18B	LTR/ERVL	(0)	614	1	728234
261	27.3	17.0	0.8	chr11	118171863	118171995	(16914627)	C	MIR3	SINE/MIR	(20)	188	30	752439
408	31.5	3.8	0.0	chr11	118570676	118570802	(16515820)	+	MIRc	SINE/MIR	39	170	(98)	753158
342	11.9	0.0	1.5	chr11	118570822	118570889	(16515733)	C	L1MB7	LINE/L1	(23)	6161	6095	753159
17	17.9	2.7	7.9	chr12	1594790	1594863	(131680446)	+	(GCGCCC)n	Simple_repeat	1	76	(0)	780921
14	5.0	0.0	0.0	chr12	6336230	6336250	(126939059)	+	(GGAG)n	Simple_repeat	1	21	(0)	788501
22	2.4	9.1	2.1	chr12	6533857	6533900	(126741409)	+	(CCCAGTG)n	Simple_repeat	1	48	(0)	788907
21	12.9	4.5	2.2	chr12	6829271	6829314	(126445995)	+	(GT)n	Simple_repeat	1	46	(0)	789483
2741	16.4	7.7	6.0	chr12	9872649	9873250	(123402059)	C	LTR18B	LTR/ERVL	(0)	614	2	794418
31	3.0	0.0	0.0	chr12	13000447	13000480	(120274829)	+	(GCAGCAGT)n	Simple_repeat	1	34	(0)	799227
5038	11.5	7.7	0.3	chr12	15688314	15689073	(117586236)	+	LTR1A2	LTR/ERV1	17	837	(0)	803141
17	20.8	3.4	3.3	chr12	15789446	15789504	(117485805)	+	(CGAG)n	Simple_repeat	1	61	(0)	803291
16	11.2	7.1	4.4	chr12	26126103	26126144	(107149165)	+	(CG)n	Simple_repeat	1	45	(0)	817541
3257	13.5	6.5	2.7	chr12	27751336	27751922	(105523387)	C	LTR18B	LTR/ERVL	(0)	614	4	820078
2393	14.9	16.9	4.5	chr12	28813823	28814356	(104460953)	+	LTR18B	LTR/ERVL	1	614	(0)	821559
2574	16.2	12.7	3.4	chr12	28818848	28819402	(104455907)	+	LTR18B	LTR/ERVL	1	614	(0)	821560
13	25.4	0.0	2.3	chr12	32106755	32106798	(101168511)	+	(CCCCCCG)n	Simple_repeat	1	44	(0)	826842
13	20.6	4.9	4.7	chr12	32106869	32106959	(101168350)	+	(GCGAGCC)n	Simple_repeat	1	91	(0)	826843
18	22.1	6.7	1.2	chr12	38905614	38905688	(94369621)	+	G-rich	Low_complexity	1	80	(0)	831698
2834	12.9	13.2	4.5	chr12	46892154	46892705	(86382604)	+	LTR18B	LTR/ERVL	1	607	(7)	842826
37	26.2	2.4	5.2	chr12	48788896	48789065	(84486244)	+	(GCCC)n	Simple_repeat	1	174	(0)	845785
192	26.8	17.8	0.0	chr12	51856253	51856349	(81418960)	+	MIR3	SINE/MIR	58	175	(33)	852011
11	12.8	8.8	0.0	chr12	54010871	54010904	(79264405)	+	(CAGCCCC)n	Simple_repeat	1	37	(0)	855750
21	25.6	1.4	1.4	chr12	54018107	54018177	(79257132)	+	G-rich	Low_complexity	1	72	(0)	855761
12	16.3	2.8	2.7	chr12	56224440	56224475	(77050834)	+	G-rich	Low_complexity	1	37	(0)	859122
1039	20.2	5.9	9.6	chr12	63400833	63401356	(69873953)	+	LTR18B	LTR/ERVL	1	614	(0)	869363
1366	19.4	9.5	0.0	chr12	69344365	69344612	(63930697)	+	AluJo	SINE/Alu	6	279	(33)	879099
2249	13.9	6.6	1.2	chr12	69344613	69345012	(63930297)	+	MSTA	LTR/ERVL-MaLR	2	424	(4)	879100
3232	14.0	3.3	10.4	chr12	98211984	98212646	(35062663)	C	LTR18B	LTR/ERVL	(0)	614	1	921840
236	31.1	3.2	2.2	chr12	101820244	101820335	(31454974)	+	L2a	LINE/L2	3302	3394	(32)	927999
1204	13.6	8.3	3.9	chr12	101820474	101820680	(31454629)	C	MER20	DNA/hAT-Charlie	(2)	217	1	928003
189	16.1	0.0	0.0	chr12	104456707	104456737	(28818572)	C	MER131	DNA?	(150)	65	35	932617
522	29.5	11.3	3.9	chr12	108565911	108566164	(24709145)	C	L4_A_Mam	LINE/RTE-X	(3242)	1748	1474	940540
235	32.8	13.4	0.0	chr12	117587629	117587744	(15687565)	C	L2a	LINE/L2	(28)	3398	3265	960670
748	26.2	2.3	6.2	chr12	120647210	120647386	(12627923)	C	MIRb	SINE/MIR	(24)	244	73	967589
766	26.6	16.8	2.5	chr12	123602672	123603383	(9671926)	C	L2a	LINE/L2	(0)	3426	2555	974524
14	18.4	2.7	0.0	chr13	28139237	28139273	(86225055)	+	(CCTCCTT)n	Simple_repeat	1	38	(0)	1006221
2075	13.6	1.3	1.3	chr13	28261551	28261851	(86102477)	+	AluJo	SINE/Alu	1	301	(11)	1006453
2942	13.0	12.1	7.2	chr13	32468596	32469177	(81895151)	+	LTR18B	LTR/ERVL	1	614	(0)	1012827
2956	13.7	8.6	6.7	chr13	32471303	32471903	(81892425)	+	LTR18B	LTR/ERVL	1	614	(0)	1012828
1283	12.0	34.9	2.0	chr13	39106151	39106596	(75257732)	C	LTR18B	LTR/ERVL	(0)	614	1	1022165
1446	15.5	12.6	8.5	chr13	61664995	61665651	(52698677)	C	LTR18B	LTR/ERVL	(24)	590	1	1055053
2507	16.9	14.3	4.2	chr13	68056803	68057351	(46306977)	C	LTR18B	LTR/ERVL	(0)	614	1	1063046
18	16.7	0.0	2.4	chr13	101290978	101291019	(13073309)	+	A-rich	Low_complexity	1	42	(0)	1109203
12	27.6	6.2	0.0	chr13	114314573	114314637	(49691)	+	(GCCGCCC)n	Simple_repeat	1	69	(0)	1125515
22	19.0	0.0	0.0	chr14	20469448	20469495	(86574223)	+	(AGCGG)n	Simple_repeat	1	48	(0)	1128100
535	1.4	0.0	22.3	chr14	20657464	20657557	(86386161)	C	tRNA-Tyr-TAC	tRNA	(3)	73	1	1128419
16544	15.2	1.2	4.2	chr14	23594901	23595557	(83448161)	C	L1MA4A	LINE/L1	(2181)	5381	4746	1133073
1939	18.3	0.0	0.0	chr14	23595558	23595863	(83447855)	C	AluJb	SINE/Alu	(5)	307	2	1133079
17	14.3	4.0	3.9	chr14	35404653	35404702	(71639016)	+	G-rich	Low_complexity	1	52	(0)	1149965
882	26.7	7.2	0.0	chr14	37983197	37983454	(69060264)	+	LTR67B	LTR/ERVL	343	620	(0)	1153657
2323	16.1	16.3	6.0	chr14	44626600	44627146	(62416572)	+	LTR18B	LTR/ERVL	1	614	(0)	1161980
2870	0.3	0.0	0.0	chr14	49862550	49862849	(57180869)	C	7SLRNA	srpRNA	(20)	300	1	1168780
2945	14.7	6.3	4.2	chr14	53214212	53214785	(53828933)	+	LTR18B	LTR/ERVL	1	587	(27)	1174236
2375	12.9	20.2	4.1	chr14	53273554	53274064	(53769654)	C	LTR18B	LTR/ERVL	(0)	614	1	1174315
3024	23.6	11.3	2.5	chr14	55156113	55156968	(51886750)	+	HAL1	LINE/L1	240	1196	(1311)	1177153
2546	13.1	18.1	4.0	chr14	59013719	59014242	(48029476)	+	LTR18B	LTR/ERVL	1	614	(0)	1183129
2498	13.8	10.7	0.5	chr14	60309919	60310354	(46733364)	C	MER66B	LTR/ERV1	(0)	486	1	1184870
2579	15.0	15.2	2.4	chr14	66010419	66010952	(41032766)	C	LTR18B	LTR/ERVL	(0)	614	1	1194031
12	12.0	0.0	6.5	chr14	76812884	76812914	(30230804)	+	(GCCCG)n	Simple_repeat	1	31	(0)	1212987
3123	14.1	11.2	0.9	chr14	84587096	84587645	(22456073)	C	LTR18B	LTR/ERVL	(0)	614	1	1224989
19	18.9	8.6	1.3	chr14	90397079	90397148	(16646570)	+	(GCA)n	Simple_repeat	1	76	(0)	1233834
270	27.7	3.8	5.6	chr14	95329022	95329128	(11714590)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	445	1242790
1724	14.8	1.8	2.5	chr14	99584811	99585094	(7458624)	+	AluJo	SINE/Alu	1	282	(30)	1250236
317	28.2	8.3	9.1	chr14	99682656	99683053	(7360665)	C	MamGypLTR3	LTR/Gypsy	(12)	882	488	1250427
269	28.2	12.0	1.7	chr14	99683172	99683290	(7360428)	C	MamGypLTR2b	LTR/Gypsy	(781)	141	9	1250428
22	22.7	0.0	1.7	chr14	102319768	102319825	(4723893)	+	(GGC)n	Simple_repeat	1	58	(0)	1254667
756	17.3	0.8	1.6	chr14	102524471	102524597	(4519121)	C	AluJr	SINE/Alu	(186)	126	1	1255086
483	18.2	6.7	3.1	chr14	102524748	102524877	(4518841)	+	MLT1M	LTR/ERVL-MaLR	121	255	(417)	1255087
13	17.6	3.3	8.1	chr15	34988252	34988311	(67002878)	+	(GCGGC)n	Simple_repeat	1	62	(0)	1283721
37	0.0	0.0	0.0	chr15	40108220	40108251	(61882938)	+	(AC)n	Simple_repeat	1	32	(0)	1290688
152	6.7	0.0	0.5	chr15	44288396	44288599	(57702590)	+	(GAGA)n	Simple_repeat	1	204	(0)	1298571
1704	16.5	1.4	2.4	chr15	50351299	50351589	(51639600)	+	AluJb	SINE/Alu	5	292	(20)	1307567
41	14.3	1.2	2.4	chr15	50351609	50351691	(51639498)	+	G-rich	Low_complexity	1	84	(0)	1307568
12	24.0	4.5	0.0	chr15	56887288	56887331	(45103858)	+	(GCCGC)n	Simple_repeat	1	46	(0)	1317809
759	22.3	0.6	2.4	chr15	64353685	64353850	(37637339)	+	AluJo	SINE/Alu	137	299	(13)	1330201
217	35.0	0.0	7.0	chr15	64488354	64488482	(37502707)	C	L2c	LINE/L2	(0)	3387	3268	1330498
17	20.9	0.0	5.5	chr15	66702311	66702366	(35288823)	+	(GAGC)n	Simple_repeat	1	52	(0)	1335298
980	18.3	4.0	0.5	chr15	66851494	66851713	(35139476)	C	L1MC5	LINE/L1	(9)	9295	9068	1335580
1222	22.2	11.3	0.6	chr15	68559886	68560225	(33430964)	C	ERV3-16A3_LTR	LTR/ERVL	(0)	422	42	1338559
2236	16.3	11.5	1.6	chr15	70022943	70023379	(31967810)	C	MER66B	LTR/ERV1	(0)	486	1	1341353
18	30.1	0.0	1.6	chr15	72117939	72118001	(29873188)	+	(CCG)n	Simple_repeat	1	63	(0)	1344929
46	0.0	0.0	0.0	chr15	74225118	74225156	(27766033)	+	(GT)n	Simple_repeat	1	39	(0)	1348478
525	25.7	5.3	2.0	chr15	74460877	74461023	(27530166)	C	MIRb	SINE/MIR	(55)	213	62	1348854
248	17.6	3.8	0.0	chr15	74995227	74995277	(26995912)	C	MIRc	SINE/MIR	(97)	171	119	1349978
300	32.5	16.5	5.8	chr15	75456289	75456687	(26534502)	C	L2c	LINE/L2	(11)	3364	2945	1350825
13	11.6	3.6	0.0	chr15	75579312	75579339	(26411850)	+	G-rich	Low_complexity	1	29	(0)	1351123
21	24.8	2.7	1.3	chr15	75579480	75579552	(26411637)	+	G-rich	Low_complexity	1	75	(0)	1351124
3147	12.5	23.1	0.9	chr15	75921676	75922266	(26068923)	C	Tigger3b	DNA/TcMar-Tigger	(468)	763	43	1351745
372	24.4	1.1	1.1	chr15	79179268	79179354	(22811835)	+	MIRc	SINE/MIR	99	185	(83)	1357393
1289	14.6	8.2	5.5	chr15	79329356	79329831	(22661358)	+	LTR18B	LTR/ERVL	1	614	(0)	1357682
420	35.0	8.7	3.7	chr15	83010833	83011235	(18979954)	C	L2c	LINE/L2	(36)	3351	2927	1363867
3623	12.8	4.6	4.7	chr15	84579096	84579709	(17411480)	C	LTR18B	LTR/ERVL	(0)	614	2	1366206
1711	15.1	2.9	2.3	chr15	84579710	84579820	(17411369)	C	AluSz6	SINE/Alu	(203)	109	1	1366205
22	14.9	2.2	0.0	chr16	2721287	2721331	(87617014)	+	G-rich	Low_complexity	1	46	(0)	1397806
21	12.2	2.1	4.1	chr16	5071862	5071909	(85266436)	+	(TGC)n	Simple_repeat	1	49	(0)	1402509
734	0.0	0.0	0.0	chr16	22297140	22297221	(68041124)	+	tRNA-Leu-CTY	tRNA	1	82	(3)	1439785
17	17.4	3.5	5.1	chr16	23149397	23149453	(67188892)	+	(AGCG)n	Simple_repeat	1	59	(0)	1441521
765	26.0	4.0	0.0	chr16	23759157	23759325	(66579020)	+	MER63A	DNA/hAT-Blackjack	33	208	(2)	1443056
1351	16.6	2.7	2.7	chr16	29943750	29943868	(60394477)	C	AluJb	SINE/Alu	(161)	151	27	1456928
241	36.5	10.1	1.2	chr16	29943960	29944266	(60394079)	C	L2c	LINE/L2	(609)	2810	2471	1456923
1075	11.5	0.0	3.6	chr16	30747851	30748015	(59590330)	+	AluJr	SINE/Alu	137	295	(17)	1458788
17	22.8	6.2	2.4	chr16	30805612	30805691	(59532654)	+	(TCCGGC)n	Simple_repeat	1	85	(0)	1458895
18	26.4	1.5	1.5	chr16	30902365	30902429	(59435916)	+	(CGCCGC)n	Simple_repeat	1	66	(0)	1459149
12	13.7	2.0	10.0	chr16	30902601	30902649	(59435696)	+	(TGTC)n	Simple_repeat	1	50	(0)	1459150
2556	18.3	9.9	7.7	chr16	31100362	31100712	(59237633)	+	LTR18B	LTR/ERVL	1	346	(268)	1459602
49	3.9	0.0	0.0	chr16	67416368	67416420	(22921925)	+	(GCTCCG)n	Simple_repeat	1	53	(0)	1501597
13	10.7	6.7	0.0	chr16	67521560	67521589	(22816756)	+	GA-rich	Low_complexity	1	32	(0)	1501808
17	27.5	3.3	0.0	chr16	75265985	75266045	(15072300)	+	(GCC)n	Simple_repeat	1	63	(0)	1516407
1926	11.4	0.0	1.1	chr16	85350785	85351046	(4987299)	C	AluSx1	SINE/Alu	(20)	292	34	1534691
306	30.5	7.9	9.4	chr16	85351047	85351137	(4987208)	C	MIR	SINE/MIR	(118)	144	60	1534690
359	26.4	0.0	0.0	chr16	85351155	85351241	(4987104)	C	MLT1J1	LTR/ERVL-MaLR	(354)	90	4	1534692
513	26.9	1.4	4.0	chr16	85420997	85421147	(4917198)	+	MIR	SINE/MIR	111	257	(5)	1534801
679	0.0	0.0	0.0	chr16	87384022	87384094	(2954251)	C	tRNA-Met_	tRNA	(3)	73	1	1538340
49	0.0	2.2	0.0	chr16	88455133	88455177	(1883168)	+	(GT)n	Simple_repeat	1	46	(0)	1539980
13	12.3	5.4	2.6	chr16	88455255	88455291	(1883054)	+	(CGCCAG)n	Simple_repeat	1	39	(0)	1539981
302	23.0	18.0	0.0	chr16	90022365	90022464	(315881)	C	L2a	LINE/L2	(2)	3424	3303	1542246
11	18.8	8.0	1.9	chr17	5438851	5438900	(77818541)	+	(GCAGGC)n	Simple_repeat	1	54	(0)	1555141
693	1.3	0.0	0.0	chr17	8187160	8187235	(75070206)	+	tRNA-Thr-ACY	tRNA	1	76	(1)	1560265
296	28.9	3.7	7.1	chr17	13045983	13046094	(70211347)	C	MIRc	SINE/MIR	(27)	241	134	1569110
16	8.2	0.0	0.0	chr17	13601837	13601862	(69655579)	+	(GGCTG)n	Simple_repeat	1	26	(0)	1570038
1329	18.6	1.5	3.9	chr17	14764468	14764746	(68492695)	+	AluJr	SINE/Alu	19	290	(22)	1571995
2407	5.5	0.7	0.0	chr17	17300471	17300760	(65956681)	C	AluSp	SINE/Alu	(21)	292	1	1576392
5150	13.9	6.7	1.8	chr17	17300814	17301774	(65955667)	+	MER52D	LTR/ERV1	564	1575	(548)	1576393
481	26.5	8.9	2.9	chr17	19647784	19648024	(63609417)	C	L2a	LINE/L2	(1123)	2296	2040	1581017
1013	15.8	4.1	0.0	chr17	28318592	28318755	(54938686)	C	AluJo	SINE/Alu	(140)	172	2	1588460
12	17.2	8.3	1.9	chr17	29390529	29390576	(53866865)	+	(CCGGCCG)n	Simple_repeat	1	52	(0)	1590555
194	21.9	0.0	0.0	chr17	30824997	30825037	(52432404)	C	MIR	SINE/MIR	(114)	148	108	1593361
1647	10.0	11.6	0.4	chr17	30825044	30825168	(52432273)	+	AluJb	SINE/Alu	1	125	(187)	1593362
198	30.4	7.5	4.3	chr17	42561819	42561959	(40695482)	+	MIRc	SINE/MIR	30	175	(93)	1615900
3096	18.2	4.2	3.9	chr17	43356532	43357143	(39900298)	+	LTR18B	LTR/ERVL	1	614	(0)	1617619
1815	17.8	10.9	2.5	chr17	43453388	43453884	(39803557)	+	LTR18B	LTR/ERVL	1	587	(27)	1617869
25	24.9	2.9	3.8	chr17	45148492	45148593	(38108848)	+	GA-rich	Low_complexity	1	105	(0)	1621434
14	16.4	2.9	0.0	chr17	45148579	45148612	(38108829)	+	(GAGCA)n	Simple_repeat	1	35	(0)	1621435
25	7.9	2.5	0.0	chr17	48577529	48577568	(34679873)	+	(CCT)n	Simple_repeat	1	41	(0)	1628112
414	30.8	0.0	1.6	chr17	50087366	50087487	(33169954)	C	MIRb	SINE/MIR	(99)	169	50	1631143
14	13.2	2.9	2.8	chr17	50426177	50426211	(32831230)	+	(CCCG)n	Simple_repeat	1	36	(0)	1631746
18	14.9	0.0	0.0	chr17	59209850	59209880	(24047561)	+	(T)n	Simple_repeat	1	31	(0)	1646701
1123	18.5	14.2	1.3	chr17	60557742	60558141	(22699300)	C	LTR18B	LTR/ERVL	(63)	551	1	1649526
3422	13.0	7.3	1.4	chr17	60560688	60561264	(22696177)	C	LTR18B	LTR/ERVL	(0)	614	1	1649530
13	16.0	2.7	2.6	chr17	62704029	62704065	(20553376)	+	G-rich	Low_complexity	1	38	(0)	1653549
13	21.5	0.0	4.8	chr17	63842651	63842692	(19414749)	+	(CCCGC)n	Simple_repeat	1	42	(0)	1655439
23	28.4	4.4	1.7	chr17	63842676	63842810	(19414631)	+	G-rich	Low_complexity	1	138	(0)	1655440
3734	9.7	5.2	4.3	chr17	70670933	70671538	(12585903)	+	LTR18B	LTR/ERVL	1	612	(2)	1667648
1382	12.6	5.0	4.6	chr17	74501678	74501996	(8755445)	C	LTR18B	LTR/ERVL	(144)	470	38	1674283
630	0.0	0.0	0.0	chr17	75034432	75034503	(8222938)	C	tRNA-Arg-AGG	tRNA	(4)	72	1	1675213
33	10.4	0.0	0.0	chr17	76072415	76072467	(7184974)	+	(CCG)n	Simple_repeat	1	53	(0)	1677337
1918	12.5	1.4	3.4	chr17	80426377	80426673	(2830768)	+	AluJb	SINE/Alu	11	301	(11)	1685002
433	22.7	9.8	11.3	chr17	80575294	80575441	(2682000)	C	L1ME3B	LINE/L1	(3191)	2955	2792	1685241
288	25.5	3.1	0.0	chr17	80575470	80575563	(2681878)	+	MER91C	DNA/hAT-Tip100	30	126	(14)	1685248
1520	27.4	9.9	5.2	chr17	80575618	80576693	(2680748)	C	L1ME3B	LINE/L1	(3403)	2743	1573	1685241
2033	8.4	4.8	2.5	chr17	81682258	81682541	(1574900)	C	AluY	SINE/Alu	(20)	291	1	1686646
986	8.1	0.0	0.0	chr18	158118	158240	(80215045)	C	AluJb	SINE/Alu	(12)	300	178	1689318
22	24.0	2.6	2.5	chr18	158379	158406	(80214879)	+	(CCCT)n	Simple_repeat	1	77	(0)	1689319
3359	14.9	3.6	0.5	chr18	23502524	23503082	(56870203)	+	MER34D	LTR/ERV1	3	579	(0)	1716342
13	20.6	4.9	4.7	chr18	24426651	24426711	(55946574)	+	(CCGCG)n	Simple_repeat	1	64	(0)	1717929
782	12.5	0.0	0.0	chr18	26717002	26717105	(53656180)	C	AluJo	SINE/Alu	(11)	301	198	1721405
13	22.6	0.0	4.4	chr18	31042994	31043038	(49330247)	+	(CCCCG)n	Simple_repeat	1	45	(0)	1727133
3342	11.5	8.2	2.9	chr18	32629420	32629667	(47743618)	+	LTR18B	LTR/ERVL	1	248	(366)	1729672
33	0.0	0.0	0.0	chr18	32629668	32629695	(47743590)	+	(AG)n	Simple_repeat	1	28	(0)	1729673
3342	11.5	8.2	2.9	chr18	32629696	32629770	(47743515)	+	LTR18B	LTR/ERVL	249	342	(272)	1729672
513	25.2	3.7	0.0	chr18	35583179	35583333	(44789952)	+	MER5A1	DNA/hAT-Charlie	2	162	(4)	1733551
408	31.2	4.9	9.9	chr18	35583426	35583596	(44789689)	+	L2a	LINE/L2	3226	3426	(0)	1733552
2293	18.5	0.6	0.3	chr18	43486269	43486632	(36886653)	+	HERVL18-int	LTR/ERVL	2720	3084	(2963)	1744269
1287	22.4	14.3	4.8	chr18	43486634	43487154	(36886131)	+	LTR18B	LTR/ERVL	36	614	(0)	1744270
55	0.0	0.0	0.0	chr18	48389190	48389236	(31984049)	+	(CT)n	Simple_repeat	1	47	(0)	1751824
253	29.6	3.0	0.0	chr18	50748446	50748543	(29624742)	C	LTR88b	LTR/Gypsy?	(733)	104	4	1755676
22	11.7	0.0	0.0	chr18	55589681	55589717	(24783568)	+	(TCA)n	Simple_repeat	1	37	(0)	1762871
1097	18.0	11.7	3.4	chr18	56641885	56642362	(23730923)	+	LTR18B	LTR/ERVL	1	614	(0)	1764420
3189	14.5	6.2	5.4	chr18	59558413	59559019	(20814266)	+	LTR18B	LTR/ERVL	3	614	(0)	1769128
2854	13.9	6.2	7.7	chr18	59561407	59562030	(20811255)	+	LTR18B	LTR/ERVL	1	614	(0)	1769130
1378	18.1	4.3	5.0	chr18	62385483	62385785	(17987500)	C	AluJo	SINE/Alu	(11)	301	1	1773374
1693	21.1	4.5	14.3	chr18	69567727	69568396	(10804889)	C	LTR18B	LTR/ERVL	(13)	601	1	1783363
188	33.0	2.0	6.5	chr18	69846202	69846308	(10526977)	C	MIR3	SINE/MIR	(20)	188	87	1783749
2564	14.7	11.4	2.9	chr18	70513475	70514034	(9859251)	C	LTR18B	LTR/ERVL	(0)	614	1	1784729
18	20.6	2.9	5.6	chr19	1021040	1021108	(57596508)	+	(CGC)n	Simple_repeat	1	71	(0)	1798080
15	20.8	4.0	6.4	chr19	1105092	1105166	(57512450)	+	(CCCGCT)n	Simple_repeat	1	78	(0)	1798233
12	19.8	2.3	4.4	chr19	1853415	1853458	(56764158)	+	(AGGCC)n	Simple_repeat	1	45	(0)	1799628
12	16.0	0.0	3.3	chr19	2096922	2096951	(56520665)	+	(GGCCG)n	Simple_repeat	1	30	(0)	1800145
258	30.7	11.1	3.4	chr19	2463141	2463406	(56154210)	C	L1M3e	LINE/L1	(5636)	1394	1106	1800847
23	37.4	0.0	0.0	chr19	5048280	5048364	(53569252)	+	(GT)n	Simple_repeat	1	85	(0)	1807139
189	32.0	2.6	0.7	chr19	5697553	5697700	(52919916)	C	L2	LINE/L2	(439)	2980	2830	1808601
2250	10.8	0.0	0.3	chr19	13879745	13880039	(44737577)	+	AluSx	SINE/Alu	3	296	(16)	1828035
246	24.4	19.5	1.0	chr19	17305318	17305428	(41312188)	C	MIR3	SINE/MIR	(102)	166	31	1835989
27	2.2	8.7	0.0	chr19	28520283	28520329	(30097287)	+	(AAAAC)n	Simple_repeat	1	51	(0)	1848913
13	31.8	0.0	1.8	chr19	29526522	29526578	(29091038)	+	(GCCCCC)n	Simple_repeat	1	57	(0)	1850369
1634	23.2	2.8	9.1	chr19	29771548	29772044	(28845572)	+	MLT1C	LTR/ERVL-MaLR	3	467	(0)	1850810
14	17.6	0.0	4.8	chr19	29942570	29942632	(28674984)	+	(CGCCCCC)n	Simple_repeat	1	60	(0)	1851207
12	11.5	10.0	2.3	chr19	30227662	30227701	(28389915)	+	(GCGA)n	Simple_repeat	1	44	(0)	1851577
19	4.0	0.0	0.0	chr19	30227737	30227762	(28389854)	+	(GCC)n	Simple_repeat	1	26	(0)	1851578
1633	17.2	2.0	1.4	chr19	30710262	30710558	(27907058)	+	AluJr	SINE/Alu	2	300	(12)	1852217
17	13.1	0.0	0.0	chr19	31339905	31339930	(27277686)	+	(A)n	Simple_repeat	1	26	(0)	1853066
1809	15.8	0.0	2.4	chr19	32329639	32329929	(26287687)	+	AluJo	SINE/Alu	1	284	(28)	1854608
16	0.0	0.0	0.0	chr19	32329970	32329986	(26287630)	+	(T)n	Simple_repeat	1	17	(0)	1854609
687	1.3	0.0	0.0	chr19	33177057	33177131	(25440485)	+	tRNA-Thr-ACY	tRNA	1	75	(2)	1856355
1823	16.4	5.3	0.0	chr19	33295974	33296259	(25321357)	C	AluJo	SINE/Alu	(10)	302	1	1856550
17	0.0	0.0	0.0	chr19	34677161	34677179	(23940437)	+	(A)n	Simple_repeat	1	19	(0)	1858988
14	24.5	0.0	2.2	chr19	36115480	36115524	(22502092)	+	(GCGGCG)n	Simple_repeat	1	45	(0)	1861899
2031	14.6	0.0	0.0	chr19	36379389	36379690	(22237926)	C	AluJo	SINE/Alu	(10)	302	1	1862427
19	21.8	0.0	2.2	chr19	36916623	36916667	(21700949)	+	(TG)n	Simple_repeat	1	45	(0)	1863509
949	24.6	3.8	0.7	chr19	37217404	37217682	(21399934)	C	L1MB7	LINE/L1	(0)	6184	5897	1864045
11	20.5	5.1	0.0	chr19	37371221	37371259	(21246357)	+	G-rich	Low_complexity	1	41	(0)	1864324
28	29.3	0.0	0.0	chr19	38243914	38243976	(20373640)	+	A-rich	Low_complexity	33	95	(0)	1866206
1794	13.6	3.9	3.2	chr19	38362867	38363040	(20254576)	C	AluJo	SINE/Alu	(0)	312	138	1866500
1105	17.7	8.5	10.2	chr19	38863197	38863556	(19754060)	+	LTR49-int	LTR/ERV1	1016	1575	(4756)	1867609
2003	21.7	13.8	4.5	chr19	38962221	38962706	(19654910)	+	LTR41	LTR/ERVL	64	622	(146)	1867851
519	23.3	8.9	1.5	chr19	39212547	39212681	(19404935)	+	MIR	SINE/MIR	6	151	(111)	1868546
619	12.7	1.0	2.1	chr19	39403058	39403506	(19214110)	C	MSR1	Satellite	(0)	444	1	1869004
1429	24.8	11.8	2.7	chr19	39410929	39411768	(19205848)	+	L2a	LINE/L2	2485	3426	(0)	1869014
330	31.7	13.1	5.1	chr19	40426326	40426521	(18191095)	+	MIRb	SINE/MIR	54	267	(1)	1871023
415	30.1	5.8	4.0	chr19	40426517	40426717	(18190899)	+	MIR	SINE/MIR	11	215	(47)	1871024
2313	9.5	0.7	0.3	chr19	40426733	40427064	(18190552)	C	AluSx	SINE/Alu	(0)	312	2	1871025
226	28.8	3.7	0.9	chr19	40541260	40541364	(18076252)	C	MIRc	SINE/MIR	(118)	150	43	1871362
243	32.7	3.2	1.7	chr19	40598566	40598696	(18018920)	C	MIR3	SINE/MIR	(136)	132	2	1871499
839	17.6	22.1	1.6	chr19	42028318	42028752	(16588864)	+	LTR50	LTR/ERVL	19	655	(140)	1874407
236	21.7	0.2	12.0	chr19	42081580	42081668	(16535948)	+	L2a	LINE/L2	3284	3415	(11)	1874522
12	28.5	4.6	1.5	chr19	42280618	42280682	(16336934)	+	(GCCG)n	Simple_repeat	1	68	(0)	1874952
22291	28.8	3.9	4.0	chr19	43314474	43317093	(15300523)	C	HERVIP10F-int	LTR/ERV1	(5185)	2552	24	1876499
1883	15.4	0.3	1.3	chr19	43483279	43483577	(15134039)	C	AluJr	SINE/Alu	(15)	297	2	1876890
13	26.1	2.4	0.0	chr19	43619558	43619599	(14998017)	+	(CGG)n	Simple_repeat	1	43	(0)	1877255
12	8.4	0.0	6.9	chr19	43774647	43774675	(14842941)	+	(GGTCA)n	Simple_repeat	1	29	(0)	1877645
17	17.2	0.0	2.4	chr19	43774730	43774779	(14842837)	+	GA-rich	Low_complexity	1	48	(0)	1877646
447	22.6	4.7	0.0	chr19	43774859	43774960	(14842656)	C	L2a	LINE/L2	(16)	3410	3304	1877647
191	17.6	0.0	0.0	chr19	45456519	45456552	(13161064)	+	MIRc	SINE/MIR	125	158	(110)	1881363
1632	16.1	0.0	2.2	chr19	45456583	45456849	(13160767)	+	AluJr	SINE/Alu	43	303	(9)	1881364
219	37.6	6.5	2.5	chr19	49987173	49987241	(8630375)	+	L2	LINE/L2	2428	2502	(917)	1892351
2096	12.8	1.0	0.0	chr19	55118037	55118340	(3499276)	C	AluSc	SINE/Alu	(1)	308	2	1903034
12	13.2	9.3	2.1	chr19	55580979	55581021	(3036595)	+	G-rich	Low_complexity	1	47	(0)	1904074
16	20.7	3.9	1.9	chr19	56404356	56404407	(2213209)	+	(CGGCCC)n	Simple_repeat	1	54	(0)	1905746
545	34.4	4.6	0.3	chr19	57279572	57279886	(1337730)	+	L2a	LINE/L2	2201	2529	(890)	1907552
2348	15.0	7.6	9.6	chr2	7053713	7054303	(235139226)	+	LTR18B	LTR/ERVL	1	578	(36)	1919362
1692	22.6	1.6	0.8	chr2	20594664	20595025	(221598504)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	1940613
2178	15.6	16.4	2.3	chr2	29042477	29042996	(213150533)	C	LTR18B	LTR/ERVL	(6)	608	1	1954707
983	19.0	15.0	5.8	chr2	36121696	36122025	(206071504)	C	LTR18B	LTR/ERVL	(248)	366	1	1965602
3227	11.2	9.9	1.7	chr2	38515437	38515973	(203677556)	+	LTR18B	LTR/ERVL	1	586	(28)	1969388
13	17.9	7.4	3.5	chr2	48314247	48314300	(193879229)	+	(GCC)n	Simple_repeat	1	58	(0)	1985746
1538	16.9	9.4	3.0	chr2	64479398	64479854	(177713675)	+	LTR18B	LTR/ERVL	1	614	(0)	2009429
187	34.5	14.6	1.6	chr2	72834906	72835214	(169358315)	+	L2b	LINE/L2	2093	2448	(971)	2022650
1151	15.6	0.0	0.0	chr2	72835215	72835381	(169358148)	C	AluJb	SINE/Alu	(12)	300	134	2022651
14	20.2	0.0	0.0	chr2	86195447	86195480	(155998049)	+	(GCGT)n	Simple_repeat	1	34	(0)	2042218
320	25.3	9.6	6.8	chr2	100292303	100292463	(141901066)	C	L1MCc	LINE/L1	(6034)	389	224	2057670
259	18.7	16.9	1.6	chr2	108350268	108350360	(133843169)	+	MIRb	SINE/MIR	157	259	(3)	2069117
308	35.3	11.6	0.0	chr2	120695959	120696179	(121497350)	C	MIRb	SINE/MIR	(3)	265	16	2087427
1109	17.6	17.2	2.2	chr2	133862264	133862696	(108330833)	C	LTR18B	LTR/ERVL	(1)	613	1	2106572
1689	14.2	0.7	8.7	chr2	139771214	139771536	(102421993)	+	AluJr	SINE/Alu	1	297	(15)	2115260
1175	19.3	6.7	13.2	chr2	139771537	139771763	(102421766)	+	MLT1A	LTR/ERVL-MaLR	165	374	(0)	2115259
4302	13.6	2.9	5.6	chr2	142180651	142181467	(100012062)	+	LTR1A2	LTR/ERV1	44	837	(0)	2118453
20	17.5	0.0	2.1	chr2	156334441	156334490	(85859039)	+	(TGCCGC)n	Simple_repeat	1	48	(0)	2137290
2352	20.1	6.0	1.8	chr2	165401248	165401428	(76792101)	+	L1MB5	LINE/L1	5971	6160	(14)	2149605
14	26.1	2.9	4.2	chr2	172084655	172084723	(70108806)	+	GA-rich	Low_complexity	1	71	(0)	2159581
2342	16.6	15.7	6.0	chr2	175062734	175063283	(67130246)	C	LTR18B	LTR/ERVL	(0)	614	2	2164260
14	13.8	0.0	5.6	chr2	191020468	191020503	(51173026)	+	(GCAGGC)n	Simple_repeat	1	36	(0)	2185241
13	20.5	0.0	4.7	chr2	201451406	201451448	(40742081)	+	(GCAGCC)n	Simple_repeat	1	43	(0)	2200073
13	26.8	1.6	4.7	chr2	205682309	205682371	(36511158)	+	(GCCGC)n	Simple_repeat	1	64	(0)	2207282
14	20.4	0.0	2.4	chr2	238320298	238320338	(3873191)	+	(CCCGCTC)n	Simple_repeat	1	41	(0)	2257650
20	7.0	0.0	0.0	chr2	238320562	238320591	(3872938)	+	(GGC)n	Simple_repeat	1	30	(0)	2257651
2598	12.8	17.3	4.7	chr20	16004485	16005017	(48439150)	C	LTR18B	LTR/ERVL	(0)	614	1	2288735
2010	12.8	12.2	2.3	chr20	36988358	36988427	(27455740)	+	MSTA	LTR/ERVL-MaLR	1	70	(358)	2318956
1387	22.2	10.4	3.0	chr20	36988428	36988757	(27455410)	C	LTR18A	LTR/ERVL	(0)	357	1	2318957
3501	12.6	4.2	4.2	chr20	47093296	47093908	(17350259)	C	LTR18B	LTR/ERVL	(0)	614	2	2339198
192	30.1	12.8	7.1	chr20	47565360	47565432	(16878735)	C	MIR3	SINE/MIR	(17)	191	125	2340433
1893	18.5	0.0	2.3	chr20	47565433	47565735	(16878432)	+	AluJb	SINE/Alu	1	296	(16)	2340434
322	32.2	6.0	2.9	chr20	62304924	62305286	(2138881)	C	L1MC4a	LINE/L1	(1944)	5938	5598	2368408
580	23.9	10.1	4.5	chr20	63973530	63973907	(470260)	+	MLT1D	LTR/ERVL-MaLR	29	451	(16)	2370315
53	0.0	0.0	0.0	chr21	31799675	31799719	(14910264)	+	(AC)n	Simple_repeat	1	45	(0)	2402110
3981	22.2	6.6	2.7	chr21	33226980	33228025	(13481958)	C	L1MCb	LINE/L1	(4950)	1095	6	2404533
605	25.7	2.3	0.0	chr21	33299631	33299801	(13410182)	+	MER5B	DNA/hAT-Charlie	4	178	(0)	2404687
33	22.6	1.6	6.2	chr21	33642406	33642532	(13067451)	+	G-rich	Low_complexity	1	129	(0)	2405359
13	25.8	1.9	3.6	chr21	33642732	33642785	(13067198)	+	(GGC)n	Simple_repeat	1	55	(0)	2405360
457	30.4	7.3	2.4	chr21	36500848	36501056	(10208927)	C	MIRb	SINE/MIR	(3)	265	46	2410003
2313	8.9	0.3	1.6	chr21	36989315	36989628	(9720355)	C	AluSq2	SINE/Alu	(3)	310	1	2410804
15	24.4	2.1	0.0	chr21	36989779	36989826	(9720157)	+	G-rich	Low_complexity	1	49	(0)	2410805
2728	12.6	16.0	4.4	chr21	37566987	37567526	(9142457)	+	LTR18B	LTR/ERVL	1	614	(0)	2411798
9711	13.6	1.7	0.8	chr21	38227979	38229403	(8480580)	C	HERV3-int	LTR/ERV1	(6987)	1439	2	2412761
1428	21.9	5.0	3.9	chr21	38229404	38229805	(8480178)	C	LTR76	LTR/ERV1	(0)	675	214	2412761
2700	3.0	0.3	0.0	chr21	38906384	38906683	(7803300)	C	AluY	SINE/Alu	(6)	305	5	2413681
18	9.7	3.0	0.0	chr21	39183299	39183331	(7526652)	+	(CCT)n	Simple_repeat	1	34	(0)	2414124
15	23.2	4.8	1.5	chr21	39183481	39183542	(7526441)	+	(CCCACCG)n	Simple_repeat	1	65	(0)	2414125
11	22.1	0.0	4.9	chr21	44939893	44939933	(1770050)	+	(CCGCGAC)n	Simple_repeat	1	41	(0)	2422349
992	28.7	4.0	3.5	chr21	46607219	46607590	(102393)	+	ERVL-B4-int	LTR/ERVL	1451	1824	(3843)	2424175
2465	6.9	0.0	0.0	chr22	17558717	17559007	(33259461)	+	AluY	SINE/Alu	2	292	(19)	2429240
94	18.3	1.5	1.5	chr22	20564452	20564654	(30253814)	+	(CAG)n	Simple_repeat	1	206	(0)	2433561
19	19.7	0.0	0.0	chr22	24101853	24101894	(26716574)	+	(GTGT)n	Simple_repeat	1	42	(0)	2439506
218	34.2	6.2	3.5	chr22	24101904	24102106	(26716362)	C	MIRb	SINE/MIR	(10)	258	50	2439507
12	12.1	7.9	2.4	chr22	29766978	29767015	(21051453)	+	(TCCTGCG)n	Simple_repeat	1	41	(0)	2451281
354	25.7	11.1	2.2	chr22	30431537	30431675	(20386793)	C	MIRb	SINE/MIR	(6)	262	110	2452597
1791	14.5	5.4	1.1	chr22	30431734	30431895	(20386573)	C	AluJo	SINE/Alu	(17)	295	120	2452598
26	0.0	0.0	0.0	chr22	30431896	30431920	(20386548)	+	(T)n	Simple_repeat	1	25	(0)	2452599
1791	14.5	5.4	1.1	chr22	30431921	30432039	(20386429)	C	AluJo	SINE/Alu	(193)	119	1	2452598
243	26.9	6.8	4.6	chr22	38318491	38318608	(12499860)	C	MIR3	SINE/MIR	(8)	200	79	2469247
1735	13.8	0.0	12.7	chr22	40711464	40711683	(10106785)	+	AluJr4	SINE/Alu	123	303	(9)	2474168
257	27.6	18.1	1.6	chr22	40711687	40711870	(10106598)	+	LTR81A	LTR/Gypsy	933	1153	(0)	2474166
1191	25.8	10.0	6.9	chr22	49718495	49718985	(1099483)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	42	2489672
546	21.8	29.2	4.0	chr22	50342271	50342602	(475866)	C	LTR41	LTR/ERVL	(308)	460	5	2490487
16	0.0	0.0	0.0	chr3	9399828	9399844	(188895715)	+	(A)n	Simple_repeat	1	17	(0)	2507137
3155	17.3	7.0	6.7	chr3	15973161	15973772	(182321787)	C	LTR18B	LTR/ERVL	(0)	614	1	2519735
18	19.6	3.7	1.8	chr3	32106453	32106506	(166189053)	+	G-rich	Low_complexity	1	56	(0)	2543220
15	4.7	0.0	0.0	chr3	38346826	38346847	(159948712)	+	(CGGA)n	Simple_repeat	1	22	(0)	2552903
2769	15.7	6.5	6.2	chr3	41963802	41964400	(156331159)	+	LTR18B	LTR/ERVL	1	601	(13)	2558257
15	21.4	1.9	3.8	chr3	42300039	42300090	(155995469)	+	(TCTGAC)n	Simple_repeat	1	53	(0)	2558861
733	26.6	8.4	2.9	chr3	42300298	42300435	(155995124)	+	LTR16E1	LTR/ERVL	243	398	(140)	2558862
2995	15.1	3.8	10.3	chr3	44206844	44207502	(154088057)	C	LTR18B	LTR/ERVL	(0)	614	1	2561728
1146	26.9	15.6	1.1	chr3	46110552	46111017	(152184542)	+	MLT1H	LTR/ERVL-MaLR	3	548	(1)	2564933
2150	17.4	9.0	8.9	chr3	98276250	98276836	(100018723)	+	LTR18B	LTR/ERVL	27	614	(0)	2638780
349	24.4	15.6	4.8	chr3	107429709	107429936	(90865623)	C	Charlie23a	DNA/hAT-Charlie	(75)	264	8	2650829
1574	13.8	0.3	18.2	chr3	115434103	115434464	(82861095)	+	AluJr	SINE/Alu	1	297	(15)	2662118
2468	29.4	7.9	6.4	chr3	115434465	115435254	(82860305)	+	ERV3-16A3_I-int	LTR/ERVL	1250	2189	(3525)	2662117
15	13.2	3.0	0.0	chr3	123328862	123328894	(74966665)	+	(GGTGAA)n	Simple_repeat	1	34	(0)	2673526
242	40.6	3.5	2.4	chr3	123329096	123329264	(74966295)	+	Tigger19a	DNA/TcMar-Tigger	121	291	(32)	2673527
987	25.9	5.8	7.4	chr3	123953621	123954024	(74341535)	+	LTR33	LTR/ERVL	117	513	(2)	2674555
3929	17.7	6.2	4.0	chr3	130747130	130747251	(67548308)	C	L1MB8	LINE/L1	(1)	6177	6058	2685926
185	26.2	9.7	3.7	chr3	149752626	149752732	(48542827)	C	L2a	LINE/L2	(6)	3420	3307	2714160
2575	15.1	7.0	13.7	chr3	150826740	150827397	(47468162)	C	LTR18B	LTR/ERVL	(31)	583	1	2715918
3587	13.1	3.3	5.9	chr3	151543197	151543827	(46751732)	C	LTR18B	LTR/ERVL	(0)	614	1	2716911
2218	21.1	7.6	5.1	chr3	161095356	161095941	(37199618)	+	LTR18B	LTR/ERVL	3	604	(10)	2730818
372	36.2	4.0	0.0	chr3	169513026	169513243	(28782316)	C	Plat_L3	LINE/CR1	(926)	2660	2434	2741408
2283	18.2	15.6	2.9	chr3	174430867	174431386	(23864173)	+	LTR18B	LTR/ERVL	17	614	(0)	2748973
354	32.5	12.9	7.0	chr3	183081046	183081588	(15213971)	+	L4_C_Mam	LINE/RTE-X	3758	4337	(801)	2762044
3850	11.4	5.5	0.8	chr3	183081589	183082173	(15213386)	+	LTR18B	LTR/ERVL	1	614	(0)	2762047
14	17.6	0.0	0.0	chr4	1580124	1580155	(188634400)	+	A-rich	Low_complexity	1	32	(0)	2790316
2516	15.3	14.8	2.6	chr4	9831394	9831930	(180382625)	+	LTR18B	LTR/ERVL	1	614	(0)	2803717
3139	11.2	7.8	5.0	chr4	9923247	9923829	(180290726)	+	LTR18B	LTR/ERVL	1	601	(13)	2803906
467	19.6	0.0	4.9	chr4	37696816	37696917	(152517638)	C	LTR78	LTR/ERV1	(75)	1229	1133	2846512
21	0.0	0.0	0.0	chr4	37696966	37696988	(152517567)	+	(CT)n	Simple_repeat	1	23	(0)	2846513
1137	24.5	7.8	3.1	chr4	37697015	37697427	(152517128)	+	LTR16	LTR/ERVL	1	434	(4)	2846514
3120	12.5	11.7	7.8	chr4	38802710	38803297	(151411258)	+	LTR18B	LTR/ERVL	1	614	(0)	2848444
2925	14.1	8.0	4.3	chr4	67150550	67151126	(123063429)	C	LTR18B	LTR/ERVL	(14)	600	1	2886536
2253	15.7	11.7	12.7	chr4	80710902	80711522	(109503033)	+	LTR18B	LTR/ERVL	1	614	(0)	2905145
3386	12.3	8.9	1.1	chr4	84096987	84097551	(106117004)	C	LTR18B	LTR/ERVL	(0)	614	1	2910682
2831	14.7	12.7	3.2	chr4	107710482	107711035	(82503520)	C	LTR18B	LTR/ERVL	(0)	614	1	2942413
2218	16.5	10.4	9.4	chr4	132763408	132764014	(57450541)	C	LTR18B	LTR/ERVL	(0)	614	1	2976198
2249	16.3	15.9	3.3	chr4	140588792	140589300	(49625255)	C	LTR18B	LTR/ERVL	(27)	587	3	2986448
4911	18.7	4.5	4.1	chr4	156559241	156560776	(33653779)	C	L1M1	LINE/L1	(2389)	5173	3479	3008942
2431	17.6	12.4	4.4	chr4	169930039	169930601	(20283954)	C	LTR18B	LTR/ERVL	(0)	614	1	3027115
3074	11.8	11.6	2.3	chr4	177728389	177728944	(12485611)	+	LTR18B	LTR/ERVL	1	614	(0)	3037355
2563	14.3	6.4	21.3	chr5	4990140	4990870	(176547389)	+	LTR18B	LTR/ERVL	1	614	(0)	3060016
2234	10.5	0.0	1.0	chr5	10962319	10962613	(170575646)	C	AluSq2	SINE/Alu	(21)	292	1	3067709
2413	11.0	21.3	11.4	chr5	10962614	10963004	(170575255)	+	LTR18B	LTR/ERVL	154	614	(0)	3067708
1494	10.9	11.7	2.0	chr5	11973380	11973632	(169564627)	C	LTR18B	LTR/ERVL	(13)	601	321	3069001
743	19.9	2.8	7.6	chr5	11973625	11973809	(169564450)	C	LTR18B	LTR/ERVL	(416)	198	23	3069001
5901	21.1	6.9	4.4	chr5	14155184	14156718	(167381541)	C	L1MC4	LINE/L1	(76)	7966	6390	3071872
279	30.7	0.0	11.6	chr5	15008720	15008892	(166529367)	+	MamGypsy2-LTR	LTR/Gypsy	7	159	(24)	3073033
189	28.3	4.8	0.0	chr5	40756193	40756252	(140782007)	C	L2c	LINE/L2	(52)	3335	3273	3109365
470	33.2	10.9	0.9	chr5	60602920	60603141	(120935118)	+	MIR	SINE/MIR	2	248	(14)	3131063
387	27.7	8.5	0.0	chr5	66337814	66337932	(115200327)	+	UCON97	DNA	145	274	(37)	3139296
190	32.5	7.6	6.9	chr5	66666838	66667098	(114871161)	C	L2c	LINE/L2	(97)	3290	3028	3139775
14	27.2	3.5	0.0	chr5	67004157	67004213	(114534046)	+	(GCCGCG)n	Simple_repeat	1	59	(0)	3140250
2500	14.7	1.0	0.5	chr5	67279054	67279462	(114258797)	C	LTR57	LTR/ERVL	(0)	411	1	3140605
864	22.9	0.6	1.1	chr5	67652787	67652969	(113885290)	+	AluJo	SINE/Alu	131	312	(0)	3141110
3321	13.5	6.2	6.7	chr5	74616461	74617077	(106921182)	C	LTR18B	LTR/ERVL	(0)	614	1	3152242
2879	14.4	9.5	6.6	chr5	75020069	75020661	(106517598)	+	LTR18B	LTR/ERVL	3	614	(0)	3152946
279	29.9	7.3	7.3	chr5	78627354	78627490	(102910769)	+	Tigger16a	DNA/TcMar-Tigger	77	213	(744)	3158351
265	26.0	3.9	3.9	chr5	78627574	78627701	(102910558)	+	MIRb	SINE/MIR	59	186	(82)	3158352
210	39.3	0.0	0.0	chr5	83253222	83253333	(98284926)	C	L2	LINE/L2	(457)	2962	2851	3165707
20	32.6	3.2	1.0	chr5	83473435	83473527	(98064732)	+	(TC)n	Simple_repeat	1	96	(0)	3166014
12	4.7	4.5	0.0	chr5	83473608	83473629	(98064630)	+	(AGGG)n	Simple_repeat	1	23	(0)	3166015
2800	15.8	10.1	2.5	chr5	99573714	99574279	(81963980)	C	LTR18B	LTR/ERVL	(0)	614	1	3186636
3352	12.4	4.2	9.5	chr5	103366893	103367542	(78170717)	C	LTR18B	LTR/ERVL	(0)	614	1	3191349
23	10.0	0.0	0.0	chr5	113295173	113295205	(68243054)	+	(A)n	Simple_repeat	1	33	(0)	3204073
12	20.0	5.0	0.0	chr5	115262801	115262840	(66275419)	+	(CCGCTCA)n	Simple_repeat	1	42	(0)	3206534
1899	13.8	5.7	0.0	chr5	117165354	117165636	(64372623)	C	AluSc	SINE/Alu	(9)	300	1	3209247
1995	17.3	0.0	0.6	chr5	131082706	131083017	(50455242)	C	AluJb	SINE/Alu	(2)	310	1	3227311
1594	13.8	6.8	1.4	chr5	131637730	131638023	(49900236)	C	MER1B	DNA/hAT-Charlie	(0)	339	29	3228302
31	0.0	0.0	0.0	chr5	131638025	131638053	(49900206)	+	(CTGGGGA)n	Simple_repeat	1	29	(0)	3228303
991	21.1	16.0	2.5	chr5	131638069	131638476	(49899783)	+	L1ME3B	LINE/L1	5678	6151	(91)	3228301
11	17.2	7.7	0.0	chr5	134176870	134176908	(47361351)	+	(GGAGGCG)n	Simple_repeat	1	42	(0)	3232043
13	10.8	6.7	0.0	chr5	136132815	136132844	(45405415)	+	(CCTC)n	Simple_repeat	1	32	(0)	3235278
283	32.7	12.0	1.0	chr5	139439598	139439804	(42098455)	+	MIRc	SINE/MIR	2	234	(34)	3240769
499	27.2	12.7	1.0	chr5	142932372	142932579	(38605680)	C	LTR89	LTR/ERVL?	(228)	651	416	3246915
261	30.6	0.0	0.0	chr5	143014325	143014396	(38523863)	C	MIRc	SINE/MIR	(5)	263	192	3247053
21	23.4	0.0	0.0	chr5	147782642	147782692	(33755567)	+	(CAG)n	Simple_repeat	1	51	(0)	3254832
12	16.9	0.0	5.4	chr5	147782757	147782793	(33755466)	+	(CCTCCT)n	Simple_repeat	1	37	(0)	3254833
349	27.9	8.8	0.0	chr5	159987690	159987793	(21550466)	+	Charlie4z	DNA/hAT-Charlie	10	123	(44)	3277131
280	32.9	4.0	0.4	chr5	172437428	172437564	(9100695)	C	MIRb	SINE/MIR	(127)	141	1	3297432
180	36.4	5.0	5.0	chr5	174532514	174532652	(7005607)	C	MIR	SINE/MIR	(101)	161	23	3301677
589	23.9	10.6	0.0	chr5	174532863	174533016	(7005243)	+	MER45A	DNA/hAT-Tip100	4	178	(0)	3301678
412	35.1	11.2	3.1	chr5	176626990	176627218	(4911041)	C	MIRb	SINE/MIR	(13)	255	6	3305690
461	29.6	12.2	3.9	chr5	177336356	177336686	(4201573)	C	L2a	LINE/L2	(564)	2855	2494	3307206
255	39.1	0.0	1.8	chr5	177402766	177402877	(4135382)	C	MIR	SINE/MIR	(43)	219	110	3307345
638	0.0	1.4	0.0	chr5	181191687	181191758	(346501)	C	tRNA-Thr-ACA	tRNA	(3)	73	1	3313826
13	9.3	5.3	5.0	chr5	181191960	181191997	(346262)	+	G-rich	Low_complexity	1	40	(0)	3313827
606	5.6	0.0	0.0	chr5	181206868	181206939	(331320)	+	tRNA-Ala-GCG	tRNA	1	72	(3)	3313850
14	24.1	0.0	8.6	chr6	684159	684228	(170121751)	+	GA-rich	Low_complexity	1	70	(0)	3315100
2760	15.8	11.4	6.4	chr6	1272342	1272922	(169533057)	+	LTR18B	LTR/ERVL	1	614	(0)	3315867
28	0.0	0.0	0.0	chr6	1624828	1624854	(169181125)	+	(T)n	Simple_repeat	1	27	(0)	3316396
29	0.0	0.0	2.9	chr6	3511327	3511361	(167294618)	+	(TG)n	Simple_repeat	1	35	(0)	3319017
40	10.5	0.0	0.0	chr6	3511361	3511422	(167294557)	+	(GAGAGA)n	Simple_repeat	1	62	(0)	3319018
326	35.9	3.5	2.8	chr6	8108074	8108328	(162697651)	+	L2b	LINE/L2	2826	3082	(337)	3326183
226	37.2	5.8	1.5	chr6	8108419	8108549	(162697430)	+	L2b	LINE/L2	3238	3374	(1)	3326183
2179	14.2	22.0	4.4	chr6	9173303	9173802	(161632177)	+	LTR18B	LTR/ERVL	2	614	(0)	3327743
12	25.3	0.0	5.8	chr6	13574519	13574570	(157231409)	+	GA-rich	Low_complexity	1	52	(0)	3334517
371	33.8	8.4	8.8	chr6	20274155	20274598	(150531381)	+	L2b	LINE/L2	2932	3373	(2)	3345730
15	29.0	0.0	3.2	chr6	24495062	24495130	(146310849)	+	(CCGCCC)n	Simple_repeat	1	66	(0)	3352039
14	13.2	2.9	2.8	chr6	26156401	26156435	(144649544)	+	(CTGCCC)n	Simple_repeat	1	36	(0)	3354734
1683	23.1	5.6	5.0	chr6	26396531	26397087	(144408892)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	23	3355171
650	1.4	0.0	0.0	chr6	26537498	26537570	(144268409)	+	tRNA-Arg-CGY_	tRNA	1	73	(3)	3355427
3386	13.0	7.5	4.5	chr6	27407129	27407723	(143398256)	C	LTR18B	LTR/ERVL	(0)	614	1	3356837
1646	15.2	1.0	5.3	chr6	27757857	27758159	(143047820)	+	AluJo	SINE/Alu	1	290	(22)	3357545
732	20.8	17.9	10.7	chr6	27758160	27758359	(143047620)	C	L1M3	LINE/L1	(1924)	4216	3958	3357544
13055	14.1	8.9	1.1	chr6	40008274	40011495	(130794484)	C	L1MA4	LINE/L1	(13)	7706	4207	3378889
550	25.4	7.5	3.6	chr6	44439717	44439908	(126366071)	C	MIRb	SINE/MIR	(2)	266	67	3387189
1714	27.1	5.9	3.2	chr6	63598416	63598975	(107207004)	C	LTR33C	LTR/ERVL	(29)	600	25	3410846
2646	14.9	13.4	2.6	chr6	69905193	69905731	(100900248)	C	LTR18B	LTR/ERVL	(8)	606	1	3418569
18	10.8	0.0	0.0	chr6	79078201	79078230	(91727749)	+	(GGA)n	Simple_repeat	1	30	(0)	3430771
2038	11.5	12.3	0.0	chr6	83867684	83867996	(86937983)	+	LTR18A	LTR/ERVL	1	357	(0)	3437088
8932	18.3	2.2	1.4	chr6	91559495	91559821	(79246158)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1317	3447859
1991	13.6	0.0	0.0	chr6	91559822	91560101	(79245878)	C	AluSx3	SINE/Alu	(3)	308	29	3447860
13	11.2	4.5	6.5	chr6	99520982	99521025	(71284954)	+	(GCCGGAG)n	Simple_repeat	1	46	(0)	3457774
17	13.2	0.0	2.9	chr6	99521007	99521041	(71284938)	+	GA-rich	Low_complexity	1	35	(0)	3457775
1522	15.5	9.9	3.5	chr6	99821247	99821752	(70984227)	+	LTR18B	LTR/ERVL	1	587	(27)	3458193
15	9.3	7.8	5.5	chr6	100881405	100881455	(69924524)	+	(CCTCCG)n	Simple_repeat	1	55	(0)	3459594
3755	24.4	10.1	3.6	chr6	106658126	106658408	(64147571)	C	L1MEc	LINE/L1	(4456)	1944	1652	3467281
1016	15.1	0.6	1.9	chr6	106658409	106658567	(64147412)	+	FRAM	SINE/Alu	1	157	(19)	3467282
3755	24.4	10.1	3.6	chr6	106658568	106659182	(64146797)	C	L1MEc	LINE/L1	(4749)	1651	975	3467281
15	22.7	5.7	2.7	chr6	107028291	107028360	(63777619)	+	(CGCGC)n	Simple_repeat	1	74	(0)	3468022
15	27.4	0.0	0.0	chr6	111259600	111259647	(59546332)	+	(AGGCGG)n	Simple_repeat	1	48	(0)	3475317
2378	17.3	9.6	11.2	chr6	112145074	112145698	(58660281)	+	LTR18B	LTR/ERVL	1	614	(0)	3476689
1595	17.6	6.7	0.4	chr6	134125486	134125763	(36680216)	C	AluJo	SINE/Alu	(14)	298	2	3506225
17	7.0	0.0	5.9	chr6	142146996	142147029	(28658950)	+	(AACAA)n	Simple_repeat	1	34	(0)	3518107
2375	10.7	0.0	0.0	chr6	148357778	148358085	(22447894)	+	AluSq	SINE/Alu	1	308	(5)	3526792
3133	13.4	6.7	6.2	chr6	164826884	164827494	(5978485)	+	LTR18B	LTR/ERVL	1	614	(0)	3551223
18	19.9	2.2	0.0	chr7	6730018	6730063	(152615910)	+	(GGCGGA)n	Simple_repeat	1	47	(0)	3570020
3536	11.3	7.5	0.9	chr7	12090005	12090565	(147255408)	+	LTR18B	LTR/ERVL	1	601	(13)	3576979
3590	11.2	6.7	1.1	chr7	12092578	12093143	(147252830)	+	LTR18B	LTR/ERVL	1	600	(14)	3576980
3155	12.7	12.5	2.4	chr7	22333626	22334175	(137011798)	+	LTR18B	LTR/ERVL	1	614	(0)	3590493
6220	22.3	8.6	2.8	chr7	32858203	32859981	(126485992)	C	L1MEc	LINE/L1	(4489)	1911	21	3606877
1761	23.3	16.8	4.0	chr7	37339823	37340408	(122005565)	+	L1MC4	LINE/L1	7381	8041	(1)	3613588
4124	7.0	0.4	0.0	chr7	39810548	39811058	(119534915)	C	MER9a1	LTR/ERVK	(0)	513	1	3617212
1047	29.8	5.9	6.8	chr7	40157031	40157513	(119188460)	+	LTR40A1	LTR/ERVL	21	498	(86)	3617906
2150	9.9	0.0	0.0	chr7	73333790	73334081	(86011892)	+	AluSq2	SINE/Alu	1	292	(21)	3664380
718	26.0	14.6	3.3	chr7	73334123	73334501	(86011472)	C	HAL1	LINE/L1	(999)	1508	1084	3664381
11	3.8	6.5	6.1	chr7	73623414	73623444	(85722529)	+	G-rich	Low_complexity	1	33	(0)	3665076
1858	16.1	19.4	8.9	chr7	90223141	90223659	(69122314)	C	LTR18B	LTR/ERVL	(27)	587	1	3690780
3332	13.7	4.7	7.0	chr7	90766680	90767308	(68578665)	C	LTR18B	LTR/ERVL	(0)	614	1	3691595
225	0.0	0.0	0.0	chr7	92447312	92447336	(66898637)	+	Charlie1b	DNA/hAT-Charlie	495	519	(4)	3693908
17	8.1	0.0	0.0	chr7	96322039	96322064	(63023909)	+	(CGG)n	Simple_repeat	1	26	(0)	3699180
2308	7.8	0.3	0.0	chr7	99375782	99376077	(59969896)	+	AluSz	SINE/Alu	2	298	(14)	3704603
1336	16.9	5.3	2.4	chr7	99376078	99376225	(59969748)	+	AluSz	SINE/Alu	137	299	(13)	3704602
333	31.1	12.8	1.8	chr7	99376233	99376399	(59969574)	+	MIRb	SINE/MIR	52	239	(29)	3704604
3588	15.4	6.5	8.0	chr7	103346855	103347430	(55998543)	C	L1MB2	LINE/L1	(370)	5801	5232	3712598
1743	11.3	32.3	3.9	chr7	122692691	122693122	(36652851)	C	LTR18B	LTR/ERVL	(1)	613	1	3739422
345	33.0	1.8	0.0	chr7	128266810	128266918	(31079055)	C	L2b	LINE/L2	(19)	3356	3246	3746917
18	14.0	0.0	0.0	chr7	129611701	129611732	(29734241)	+	(CGG)n	Simple_repeat	1	32	(0)	3749522
13	21.0	3.2	6.2	chr7	129611757	129611818	(29734155)	+	(AGGCGC)n	Simple_repeat	1	64	(0)	3749523
592	29.9	2.9	2.4	chr7	134834479	134834687	(24511286)	+	MIRc	SINE/MIR	43	252	(16)	3758105
360	28.0	6.7	5.6	chr7	139549574	139549764	(19796209)	+	MIRc	SINE/MIR	7	200	(68)	3765831
195	29.2	16.5	0.0	chr7	139549752	139549847	(19796126)	C	MIR3	SINE/MIR	(7)	201	87	3765832
196	33.9	1.7	0.0	chr7	140506967	140507025	(18838948)	+	X7C_LINE	LINE/CR1	165	224	(12)	3767635
223	32.8	9.4	1.6	chr7	151088822	151088948	(8257025)	+	L2	LINE/L2	2434	2571	(848)	3782880
12	22.6	4.2	2.0	chr7	155961750	155961797	(3384176)	+	G-rich	Low_complexity	1	50	(0)	3790315
2208	12.6	7.1	0.0	chr7	159326820	159327161	(18812)	C	LTR18B	LTR/ERVL	(246)	368	1	3794326
14	24.9	3.9	0.0	chr8	12755556	12755607	(132383029)	+	G-rich	Low_complexity	1	54	(0)	3811507
236	32.9	15.3	4.5	chr8	17464680	17464899	(127673737)	C	MamRTE1	LINE/RTE-BovB	(1008)	2804	2557	3818228
211	30.1	5.7	2.0	chr8	17464889	17464997	(127673639)	C	L2c	LINE/L2	(27)	3399	3255	3818234
1897	25.4	9.6	5.7	chr8	22237338	22237806	(122900830)	C	L2a	LINE/L2	(303)	3123	2563	3825811
12	10.0	0.0	0.0	chr8	29848485	29848506	(115290130)	+	(TTCT)n	Simple_repeat	1	22	(0)	3838597
19	7.1	3.1	3.0	chr8	37453228	37453259	(107685377)	+	(GA)n	Simple_repeat	1	33	(0)	3850345
13	18.8	2.6	2.6	chr8	37695584	37695621	(107443015)	+	(GCG)n	Simple_repeat	1	39	(0)	3850803
14	31.0	1.2	4.6	chr8	38468505	38468590	(106670046)	+	(GCCGCCC)n	Simple_repeat	1	87	(0)	3852337
329	26.4	1.9	1.9	chr8	42542202	42542309	(102596327)	+	MIRb	SINE/MIR	88	195	(73)	3858985
433	24.1	13.6	0.0	chr8	48137122	48137254	(97001382)	+	MLT1E2	LTR/ERVL-MaLR	121	274	(353)	3863009
2453	13.4	13.8	6.4	chr8	64000796	64001360	(81137276)	+	LTR18B	LTR/ERVL	1	614	(0)	3883932
3241	13.4	10.4	1.8	chr8	95204272	95204831	(49933805)	+	LTR18B	LTR/ERVL	1	614	(0)	3928395
973	16.8	3.1	5.9	chr8	97325675	97325876	(47812760)	+	LTR18B	LTR/ERVL	1	196	(418)	3931569
1551	13.1	11.3	2.3	chr8	97325874	97326139	(47812497)	+	LTR18B	LTR/ERVL	322	614	(0)	3931569
1541	13.8	8.5	1.8	chr8	100881749	100882224	(44256412)	C	LTR18B	LTR/ERVL	(0)	614	20	3937714
2905	15.0	10.8	3.5	chr8	108710474	108711041	(36427595)	C	LTR18B	LTR/ERVL	(0)	614	1	3949761
2738	14.5	10.3	4.8	chr8	110894390	110894968	(34243668)	C	LTR18B	LTR/ERVL	(0)	614	1	3952802
9862	15.4	2.0	0.2	chr8	118694131	118695562	(26443074)	C	MSTA-int	LTR/ERVL-MaLR	(176)	1455	2	3963728
1312	14.5	6.8	6.3	chr8	138100884	138101398	(7037238)	+	LTR18B	LTR/ERVL	1	614	(0)	3998154
12	13.7	0.0	0.0	chr9	4662430	4662453	(133732264)	+	(AGC)n	Simple_repeat	1	24	(0)	4015436
36	0.0	2.7	0.0	chr9	38672793	38672829	(99721888)	+	(TTTTTTCT)n	Simple_repeat	1	38	(0)	4064980
1975	12.4	1.0	1.7	chr9	86581415	86581713	(51813004)	C	AluSz6	SINE/Alu	(15)	297	1	4108114
21	24.1	0.0	1.7	chr9	105244524	105244583	(33150134)	+	G-rich	Low_complexity	1	60	(0)	4137223
2609	13.9	15.1	4.4	chr9	110180965	110181506	(28213211)	+	LTR18B	LTR/ERVL	1	610	(4)	4145808
12	20.4	5.0	0.0	chr9	124853148	124853187	(13541530)	+	G-rich	Low_complexity	1	42	(0)	4173398
14	24.5	0.0	2.2	chr9	125143341	125143385	(13251332)	+	(CCCCCA)n	Simple_repeat	1	45	(0)	4173996
214	31.2	11.1	3.7	chr9	126927184	126927399	(11467318)	C	L2c	LINE/L2	(1065)	2354	2121	4177333
2339	11.5	4.1	3.3	chr9	129075681	129076040	(9318677)	C	THE1B	LTR/ERVL-MaLR	(0)	364	2	4182039
1976	13.2	0.7	0.3	chr9	129790074	129790362	(8604355)	C	AluJb	SINE/Alu	(20)	292	3	4183650
13	20.6	6.8	3.2	chr9	129803226	129803284	(8591433)	+	(GGC)n	Simple_repeat	1	63	(0)	4183683
11	21.5	6.0	1.9	chr9	136483793	136483842	(1910875)	+	(GCGGCC)n	Simple_repeat	1	53	(0)	4194420
2223	16.4	16.4	5.3	chrX	14448516	14448730	(141592165)	+	LTR18B	LTR/ERVL	1	248	(366)	4382763
34	3.0	0.0	0.0	chrX	14448731	14448764	(141592131)	+	(AG)n	Simple_repeat	1	34	(0)	4382764
2223	16.4	16.4	5.3	chrX	14448765	14449090	(141591805)	+	LTR18B	LTR/ERVL	249	613	(1)	4382763
16	11.5	0.0	3.2	chrX	44873571	44873601	(111167294)	+	(CGC)n	Simple_repeat	1	31	(0)	4429940
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
12	30.9	0.0	2.0	chrX	107677040	107677089	(48363806)	+	GA-rich	Low_complexity	1	50	(0)	4504626
488	27.6	3.8	0.0	chrX	109891168	109891294	(46149601)	+	MER91A	DNA/hAT-Tip100	28	159	(37)	4507524
3927	11.0	4.9	0.8	chrX	120205918	120206506	(35834389)	+	LTR18B	LTR/ERVL	1	614	(0)	4522585
43	14.5	0.0	0.0	chrX	120309670	120309745	(35731150)	+	(CTCTCT)n	Simple_repeat	1	76	(0)	4522742
16	12.1	3.6	0.0	chrX	120309745	120309772	(35731123)	+	(TG)n	Simple_repeat	1	29	(0)	4522743
2709	13.0	16.1	3.6	chrX	140145057	140145590	(15895305)	+	LTR18B	LTR/ERVL	1	614	(0)	4551782