479	19.7	26.8	2.7	chr1	778255	778442	(248177980)	C	FRAM	SINE/Alu	(8)	294	45	999
18	27.1	1.1	5.6	chr1	827542	827629	(248128793)	+	G-rich	Low_complexity	1	89	(0)	1063
19	13.0	0.0	6.2	chr1	959305	959352	(247997070)	+	(CCGCC)n	Simple_repeat	1	48	(0)	1202
837	9.9	3.2	0.8	chr1	1002192	1002312	(247954110)	C	AluJr4	SINE/Alu	(178)	134	11	1258
68	18.5	2.5	5.3	chr1	1315661	1315863	(247640559)	+	GA-rich	Low_complexity	1	208	(0)	1579
16	24.5	1.6	3.2	chr1	1375060	1375120	(247581302)	+	(GCCCGGC)n	Simple_repeat	1	62	(0)	1639
2370	8.8	1.3	0.0	chr1	1375701	1376008	(247580414)	+	AluSx1	SINE/Alu	1	312	(0)	1640
2137	15.8	12.2	0.0	chr1	1471237	1471375	(247485047)	C	LTR10A	LTR/ERV1	(439)	170	2	1798
15	20.2	2.1	2.1	chr1	1471604	1471650	(247484772)	+	(CCCCGCC)n	Simple_repeat	1	48	(0)	1800
29	3.2	0.0	0.0	chr1	1658919	1658950	(247297472)	+	(CGC)n	Simple_repeat	1	32	(0)	2112
14	18.2	6.8	0.0	chr1	2227254	2227297	(246729125)	+	G-rich	Low_complexity	1	47	(0)	3035
330	20.6	12.8	0.5	chr1	2232710	2232850	(246723572)	+	MIR	SINE/MIR	46	198	(32)	3039
249	34.1	3.7	8.1	chr1	3775045	3775208	(245181214)	+	MIRc	SINE/MIR	9	162	(46)	4335
3295	26.6	0.7	0.7	chr1	3803659	3805070	(245151352)	C	HERVK13-int	LTR/ERVK	(2024)	6092	3756	4376
12	13.8	11.9	3.0	chr1	6199328	6199386	(242757036)	+	G-rich	Low_complexity	1	66	(0)	7812
227	28.2	8.6	0.0	chr1	6200028	6200112	(242756310)	+	L2b	LINE/L2	596	688	(2731)	7813
205	30.0	0.0	0.0	chr1	6200116	6200185	(242756237)	+	L2b	LINE/L2	958	1027	(2392)	7813
590	21.2	3.6	0.0	chr1	6200200	6200331	(242756091)	C	MER5A1	DNA/hAT-Charlie	(29)	137	1	7814
28	21.9	0.0	3.8	chr1	6554193	6554272	(242402150)	+	G-rich	Low_complexity	1	80	(0)	8454
11	21.3	4.4	2.1	chr1	6784676	6784720	(242171702)	+	(GCCGGC)n	Simple_repeat	1	47	(0)	8925
12	31.0	0.0	1.9	chr1	8818008	8818060	(240138362)	+	(CCGCCCC)n	Simple_repeat	1	53	(0)	12309
316	27.2	16.4	2.5	chr1	9234168	9234329	(239722093)	C	MIR	SINE/MIR	(9)	253	65	13218
1197	26.0	8.9	1.2	chr1	9360428	9360851	(239595571)	C	MLT1C	LTR/ERVL-MaLR	(1)	466	7	13422
182	26.0	2.0	0.0	chr1	9589474	9589523	(239366899)	C	MIR	SINE/MIR	(117)	145	95	13957
208	21.3	9.6	2.6	chr1	10032346	10032422	(238924000)	+	Penelope1_Vert	LINE/Penelope	271	353	(734)	14940
185	17.5	2.4	0.0	chr1	10430229	10430268	(238526154)	C	L2a	LINE/L2	(38)	3388	3348	15779
448	29.4	4.7	6.1	chr1	10471676	10471871	(238484551)	C	MIRb	SINE/MIR	(51)	217	25	15879
1802	24.4	7.4	4.0	chr1	11275748	11276330	(237680092)	C	L2a	LINE/L2	(294)	3132	2550	17355
2328	9.5	0.3	0.0	chr1	11642729	11643023	(237313399)	+	AluSc	SINE/Alu	1	296	(13)	18135
1346	16.2	1.9	4.1	chr1	11908526	11908796	(237047626)	+	MER1B	DNA/hAT-Charlie	75	339	(0)	18707
52	0.0	0.0	0.0	chr1	11909549	11909596	(237046826)	+	(GCCCCGCCGT)n	Simple_repeat	1	48	(0)	18710
768	7.9	0.0	5.0	chr1	11909807	11909926	(237046496)	C	U5	snRNA	(1)	115	2	18711
465	20.5	2.4	13.5	chr1	12075463	12075654	(236880768)	C	MLT1D	LTR/ERVL-MaLR	(274)	231	62	19088
2388	13.1	11.9	3.2	chr1	12075725	12076087	(236880335)	+	LTR19A	LTR/ERV1	1	405	(81)	19100
800	19.1	2.5	0.6	chr1	12124986	12125143	(236831279)	+	MER5A1	DNA/hAT-Charlie	5	165	(1)	19220
491	29.5	0.8	3.7	chr1	12125281	12125497	(236830925)	+	MIR	SINE/MIR	11	225	(43)	19221
863	13.5	0.0	0.8	chr1	12218393	12218518	(236737904)	+	AluJr	SINE/Alu	1	125	(187)	19420
500	9.4	0.0	0.0	chr1	12218534	12218597	(236737825)	+	AluJb	SINE/Alu	226	289	(23)	19421
261	29.0	12.3	1.0	chr1	12218610	12218710	(236737712)	C	MIRc	SINE/MIR	(35)	233	120	19422
3380	13.8	2.3	0.9	chr1	12657427	12657987	(236298435)	C	MER41E	LTR/ERV1	(0)	595	27	20189
114	12.6	2.0	1.4	chr1	12658001	12658203	(236298219)	+	(CTTT)n	Simple_repeat	1	207	(0)	20190
23	16.3	0.0	3.8	chr1	12658206	12658258	(236298164)	+	(CCCT)n	Simple_repeat	1	53	(0)	20191
2100	12.3	0.0	0.0	chr1	12658259	12658558	(236297864)	C	AluSz6	SINE/Alu	(12)	300	1	20192
1644	18.4	2.0	3.6	chr1	14776647	14776955	(234179467)	+	AluJo	SINE/Alu	1	304	(8)	23832
349	26.2	10.6	14.8	chr1	14776956	14776983	(234179439)	C	MIRb	SINE/MIR	(94)	174	158	23831
28	0.0	0.0	5.6	chr1	14776984	14777019	(234179403)	+	(TTTGT)n	Simple_repeat	1	36	(0)	23833
2130	6.5	4.6	3.3	chr1	14777020	14777295	(234179127)	C	AluY	SINE/Alu	(31)	280	1	23834
41	0.0	0.0	0.0	chr1	15544152	15544186	(233412236)	+	(AC)n	Simple_repeat	1	35	(0)	25507
314	21.6	7.4	0.0	chr1	15544187	15544266	(233412156)	C	L1M5	LINE/L1	(515)	5609	5523	25508
617	26.4	1.1	4.4	chr1	16145822	16146003	(232810419)	+	MIRb	SINE/MIR	54	229	(39)	26779
479	22.3	7.5	1.3	chr1	16513455	16513604	(232442818)	C	LTR75	LTR/ERVL	(401)	161	2	27675
326	16.7	12.2	0.0	chr1	16513606	16513677	(232442745)	+	MER45B	DNA/hAT-Tip100	312	393	(647)	27676
644	1.4	0.0	0.0	chr1	16545939	16546009	(232410413)	C	tRNA-Gly-GGG	tRNA	(3)	71	1	27733
615	4.2	0.0	0.0	chr1	16678270	16678341	(232278081)	C	tRNA-Gly-GGG	tRNA	(2)	72	1	27935
1541	0.0	0.0	0.0	chr1	16895980	16896143	(232060279)	+	U1	snRNA	1	164	(1)	28204
1328	19.8	6.2	5.9	chr1	16905464	16905857	(232050565)	+	LTR4	LTR/ERV1	200	596	(0)	28228
2431	8.4	0.0	0.0	chr1	17054378	17054675	(231901747)	C	AluSx3	SINE/Alu	(13)	298	1	28581
1568	11.1	9.4	6.2	chr1	17054678	17054830	(231901592)	C	AluJo	SINE/Alu	(14)	298	143	28582
584	33.0	11.8	4.7	chr1	17440310	17440738	(231515684)	C	L2c	LINE/L2	(1)	3386	2923	29387
2077	12.8	0.0	3.2	chr1	17487320	17487631	(231468791)	C	AluSx	SINE/Alu	(10)	302	1	29528
2453	9.3	0.0	0.0	chr1	17487632	17487933	(231468489)	C	AluSq	SINE/Alu	(11)	302	1	29529
570	23.3	7.3	11.3	chr1	18806989	18807041	(230149381)	C	L2b	LINE/L2	(233)	3142	3087	32460
246	26.9	1.5	0.0	chr1	18807054	18807120	(230149302)	C	MIR3	SINE/MIR	(33)	175	108	32462
254	35.3	4.1	0.9	chr1	18908861	18908981	(230047441)	+	L2a	LINE/L2	3227	3406	(20)	32670
323	32.0	7.7	2.3	chr1	18909004	18909221	(230047201)	+	MIRb	SINE/MIR	2	236	(32)	32671
20	24.4	0.0	4.4	chr1	19210179	19210246	(229746176)	+	(CCG)n	Simple_repeat	1	68	(0)	33227
11	3.8	6.5	6.1	chr1	19311939	19311969	(229644453)	+	(GGCGC)n	Simple_repeat	1	33	(0)	33409
368	22.7	2.7	5.2	chr1	19313066	19313181	(229643241)	C	MIRb	SINE/MIR	(35)	233	121	33410
3435	14.3	5.3	0.2	chr1	19459676	19460264	(229496158)	+	Tigger7	DNA/TcMar-Tigger	9	629	(1862)	33666
245	28.7	12.8	3.4	chr1	21177346	21177493	(227778929)	C	MIRb	SINE/MIR	(45)	223	60	37303
320	27.0	5.0	0.6	chr1	21300781	21300951	(227655471)	+	MIR	SINE/MIR	18	260	(8)	37609
1250	14.3	5.8	0.0	chr1	21676178	21676373	(227280049)	C	AluJb	SINE/Alu	(20)	292	85	38443
354	27.2	0.5	9.8	chr1	21686797	21687000	(227269422)	C	HAL1	LINE/L1	(2131)	376	192	38447
3491	20.5	5.0	1.4	chr1	21779574	21780553	(227175869)	+	L1MB5	LINE/L1	5255	6158	(16)	38652
195	36.1	3.2	14.8	chr1	21905067	21905149	(227051273)	+	L2a	LINE/L2	2842	2921	(498)	38919
43	5.8	1.9	0.0	chr1	21905150	21905203	(227051219)	+	(AC)n	Simple_repeat	1	55	(0)	38920
195	36.1	3.2	14.8	chr1	21905204	21905236	(227051186)	+	L2a	LINE/L2	2922	2935	(484)	38919
36	7.2	0.0	0.0	chr1	21905237	21905280	(227051142)	+	(AC)n	Simple_repeat	1	44	(0)	38921
274	28.8	7.9	3.7	chr1	21905281	21905457	(227050965)	+	L2a	LINE/L2	2936	3145	(281)	38919
193	29.1	1.1	3.4	chr1	21907357	21907445	(227048977)	+	MIR3	SINE/MIR	96	182	(26)	38928
14	26.9	1.4	5.3	chr1	23019449	23019522	(225936900)	+	(GCGCGGC)n	Simple_repeat	1	75	(0)	41475
19	24.5	0.0	1.8	chr1	23019614	23019668	(225936754)	+	(GGC)n	Simple_repeat	1	55	(0)	41476
287	28.8	7.0	5.7	chr1	23377150	23377289	(225579133)	C	L2b	LINE/L2	(279)	3096	2955	42258
13	9.3	0.0	0.0	chr1	23554620	23554642	(225401780)	+	(GAAG)n	Simple_repeat	1	23	(0)	42729
464	31.3	6.9	0.9	chr1	23799997	23800215	(225156207)	C	MIRb	SINE/MIR	(13)	255	23	43389
302	16.3	11.3	2.8	chr1	25239653	25239750	(223716672)	C	FRAM	SINE/Alu	(10)	156	79	46682
15	17.5	0.0	0.0	chr1	25543664	25543695	(223412727)	+	(GGC)n	Simple_repeat	1	32	(0)	47358
15	18.2	0.0	2.6	chr1	25543805	25543843	(223412579)	+	(GCCGG)n	Simple_repeat	1	39	(0)	47359
49	23.4	1.5	6.5	chr1	25800118	25800315	(223156107)	+	(CCCCG)n	Simple_repeat	1	201	(0)	47855
434	32.3	4.2	11.3	chr1	25998673	25998955	(222957467)	C	L2b	LINE/L2	(52)	3323	3062	48302
425	25.2	8.0	0.0	chr1	26032949	26033063	(222923359)	C	MIR3	SINE/MIR	(8)	200	76	48397
207	25.0	4.0	0.0	chr1	26126809	26126856	(222829566)	+	MIRb	SINE/MIR	4	53	(215)	48624
2206	10.3	0.7	1.0	chr1	26126861	26127152	(222829270)	+	AluSq2	SINE/Alu	7	297	(16)	48625
21	25.8	1.2	4.7	chr1	26164344	26164428	(222791994)	+	(CGC)n	Simple_repeat	1	86	(0)	48725
415	26.3	8.8	6.0	chr1	26234551	26234817	(222721605)	C	L2b	LINE/L2	(35)	3340	3068	48879
470	27.0	2.6	0.0	chr1	26378952	26379099	(222577323)	+	L1ME3G	LINE/L1	427	578	(346)	49195
2154	12.9	0.0	0.0	chr1	26633574	26633867	(222322555)	+	AluSx	SINE/Alu	1	294	(18)	49835
5388	10.5	0.8	10.7	chr1	26633868	26634089	(222322333)	+	MER41-int	LTR/ERV1	5491	5688	(1517)	49828
26	0.0	0.0	0.0	chr1	26686060	26686084	(222270338)	+	(GTTTT)n	Simple_repeat	1	25	(0)	49988
2140	10.3	0.0	0.0	chr1	26686086	26686366	(222270056)	C	AluSx1	SINE/Alu	(31)	281	1	49989
639	22.0	3.6	0.0	chr1	26686369	26686500	(222269922)	C	FAM	SINE/Alu	(16)	169	33	49990
2411	8.8	0.0	0.3	chr1	26687401	26687705	(222268717)	+	AluSp	SINE/Alu	1	304	(9)	49992
18	14.0	3.1	0.0	chr1	26687776	26687807	(222268615)	+	(GT)n	Simple_repeat	1	33	(0)	49993
209	29.7	7.5	5.1	chr1	27449196	27449312	(221507110)	+	L2c	LINE/L2	3255	3374	(13)	51743
2347	9.1	0.0	0.3	chr1	27449316	27449612	(221506810)	+	AluSz	SINE/Alu	1	296	(16)	51744
295	32.3	2.4	4.6	chr1	27490708	27490837	(221465585)	+	MIRb	SINE/MIR	63	189	(79)	51854
2456	6.9	0.7	0.3	chr1	27490892	27491196	(221465226)	+	AluSp	SINE/Alu	3	308	(5)	51855
1913	8.0	0.0	18.1	chr1	27491200	27491564	(221464858)	+	AluSq2	SINE/Alu	3	301	(12)	51856
469	24.4	5.3	0.1	chr1	27504951	27505098	(221451324)	C	MIRc	SINE/MIR	(36)	172	20	51902
392	26.2	11.3	0.0	chr1	27523450	27523575	(221432847)	C	MIR3	SINE/MIR	(41)	167	26	51958
12	22.7	0.0	0.0	chr1	27523698	27523729	(221432693)	+	(TGTC)n	Simple_repeat	1	32	(0)	51959
16	8.3	0.0	0.0	chr1	27529236	27529261	(221427161)	+	(CCTC)n	Simple_repeat	1	26	(0)	51968
350	23.2	17.0	3.8	chr1	27605038	27605181	(221351241)	C	MIRb	SINE/MIR	(96)	166	6	52106
374	33.5	12.3	4.7	chr1	27608251	27608699	(221347723)	+	L2c	LINE/L2	2820	3320	(67)	52111
454	23.5	2.9	9.1	chr1	27669625	27669803	(221286619)	+	MIR	SINE/MIR	63	233	(29)	52266
611	17.7	4.4	3.0	chr1	28235199	28235332	(220721090)	C	MER4D	LTR/ERV1	(0)	903	768	53613
2479	7.2	0.3	0.3	chr1	28235334	28235639	(220720783)	C	AluSx	SINE/Alu	(6)	306	1	53614
278	19.1	0.0	1.6	chr1	28236203	28236266	(220720156)	C	LTR16D1	LTR/ERVL	(484)	191	129	53615
1949	6.7	0.0	0.4	chr1	28346053	28346291	(220610131)	C	AluSx1	SINE/Alu	(11)	301	64	53956
1790	15.1	0.0	0.3	chr1	28505413	28505711	(220450711)	C	AluSz6	SINE/Alu	(13)	299	2	54373
1252	9.7	0.0	0.6	chr1	28506775	28506950	(220449472)	C	AluSg	SINE/Alu	(85)	225	51	54375
241	12.1	0.0	0.0	chr1	28507044	28507076	(220449346)	C	Alu	SINE/Alu	(100)	33	1	54376
523	28.9	6.8	0.0	chr1	28511132	28511292	(220445130)	+	MIR	SINE/MIR	34	206	(56)	54385
2449	5.3	0.0	0.0	chr1	28514169	28514470	(220441952)	+	AluY	SINE/Alu	1	302	(9)	54396
2238	8.8	0.3	0.0	chr1	28514480	28514776	(220441646)	+	AluSp	SINE/Alu	1	298	(15)	54397
709	23.5	7.6	3.0	chr1	28553887	28553916	(220402506)	+	MIR	SINE/MIR	3	32	(230)	54506
2341	9.3	0.0	0.0	chr1	28553917	28554227	(220402195)	+	AluSq	SINE/Alu	2	312	(1)	54507
384	29.4	2.7	2.7	chr1	28648880	28649025	(220307397)	+	AluJr4	SINE/Alu	11	156	(156)	54782
196	26.6	18.3	0.0	chr1	28883685	28883778	(220072644)	C	MIRc	SINE/MIR	(100)	168	54	55399
276	27.8	1.8	0.9	chr1	30769533	30769641	(218186781)	+	MER102c	DNA/hAT-Charlie	213	322	(9)	59022
305	26.3	7.7	1.0	chr1	30769711	30769835	(218186587)	C	MIR3	SINE/MIR	(95)	135	3	59023
667	27.5	4.6	11.8	chr1	30778486	30778840	(218177582)	+	MLT1K	LTR/ERVL-MaLR	101	428	(167)	59042
428	26.7	5.0	0.2	chr1	30778961	30779093	(218177329)	C	MIR	SINE/MIR	(42)	166	28	59043
374	34.8	10.5	2.4	chr1	30809567	30809863	(218146559)	+	L2a	LINE/L2	3059	3382	(44)	59126
406	30.7	3.8	3.8	chr1	30809884	30810069	(218146353)	C	LTR85a	LTR/Gypsy?	(180)	522	337	59127
30	25.2	1.1	2.2	chr1	30814388	30814478	(218141944)	+	(CCTCT)n	Simple_repeat	1	92	(0)	59136
843	31.4	11.9	1.9	chr1	30814481	30815411	(218141011)	+	L2a	LINE/L2	2255	3288	(87)	59137
550	29.1	11.7	0.0	chr1	31826745	31826985	(217129437)	C	L1ME3B	LINE/L1	(354)	5888	5616	61397
415	17.2	3.3	12.1	chr1	31826987	31827118	(217129304)	C	LTR16E1	LTR/ERVL	(1)	537	418	61399
552	27.6	16.6	2.2	chr1	31827153	31827419	(217129003)	C	LTR16E1	LTR/ERVL	(223)	315	3	61399
323	14.6	0.0	0.0	chr1	31939557	31939604	(217016818)	+	MER94B	DNA/hAT-Blackjack	84	131	(2)	61656
717	17.0	1.1	17.8	chr1	32133706	32133762	(216822660)	+	L1M4c	LINE/L1	1582	1629	(4755)	62176
1484	10.6	0.5	0.0	chr1	32133763	32133960	(216822462)	+	AluSx1	SINE/Alu	5	203	(109)	62178
2058	11.5	0.3	4.8	chr1	32133961	32134272	(216822150)	+	AluSx1	SINE/Alu	1	298	(14)	62179
15	26.8	6.8	1.3	chr1	32179895	32179967	(216776455)	+	(GC)n	Simple_repeat	1	78	(0)	62270
15	11.7	0.0	0.0	chr1	32292241	32292268	(216664154)	+	(GGGCC)n	Simple_repeat	1	28	(0)	62539
1459	15.5	7.7	1.1	chr1	32721157	32721433	(216234989)	C	AluSz	SINE/Alu	(10)	302	6	63575
373	21.3	18.6	0.8	chr1	34843950	34844096	(214112326)	C	MIRb	SINE/MIR	(40)	228	39	67526
39	32.2	0.0	0.0	chr1	35192740	35192869	(213763553)	+	(GCG)n	Simple_repeat	1	130	(0)	68203
17	27.0	2.9	1.4	chr1	35192969	35193037	(213763385)	+	(CCGCCA)n	Simple_repeat	1	70	(0)	68204
2194	10.5	0.7	1.3	chr1	35193860	35193996	(213762426)	+	AluSq2	SINE/Alu	1	135	(178)	68205
2174	17.6	1.9	1.1	chr1	35499219	35499580	(213456842)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	68879
19	20.7	5.4	5.2	chr1	35499741	35499832	(213456590)	+	(AACA)n	Simple_repeat	1	97	(0)	68880
337	32.5	18.6	0.8	chr1	35882089	35882600	(213073822)	C	L2	LINE/L2	(889)	2530	1907	69698
187	28.8	5.7	1.5	chr1	35882649	35882715	(213073707)	+	L2b	LINE/L2	3283	3352	(35)	69687
278	14.9	0.0	0.0	chr1	36089366	36089412	(212867010)	C	Tigger5b	DNA/TcMar-Tigger	(35)	437	391	70110
250	17.0	0.0	3.6	chr1	36089411	36089465	(212866957)	+	Tigger5b	DNA/TcMar-Tigger	415	467	(5)	70111
351	30.0	5.9	1.6	chr1	36223857	36224071	(212732351)	C	MIRc	SINE/MIR	(9)	259	29	70423
475	30.6	11.5	1.0	chr1	36323837	36324031	(212632391)	C	MIRb	SINE/MIR	(22)	246	29	70649
374	32.7	10.4	1.0	chr1	36516799	36516999	(212439423)	C	MIRb	SINE/MIR	(31)	237	16	71047
382	19.7	15.3	0.0	chr1	37513715	37513836	(211442586)	C	Charlie4z	DNA/hAT-Charlie	(14)	153	10	72891
252	36.2	11.2	3.7	chr1	37514970	37515379	(211441043)	+	L2	LINE/L2	2428	2872	(547)	72895
1961	4.5	11.2	0.0	chr1	37690016	37690284	(211266138)	C	AluSx1	SINE/Alu	(9)	303	1	73248
399	24.4	3.4	0.3	chr1	37931356	37931482	(211024940)	C	MIR3	SINE/MIR	(89)	141	10	73736
184	32.6	4.0	2.1	chr1	38818454	38818550	(210137872)	+	MIRb	SINE/MIR	86	184	(84)	75385
11	14.2	10.3	0.0	chr1	38991486	38991524	(209964898)	+	G-rich	Low_complexity	1	43	(0)	75807
2592	1.1	0.0	0.0	chr1	39606452	39606730	(209349692)	+	AluYa5	SINE/Alu	21	299	(12)	77040
16	8.7	0.0	0.0	chr1	39672236	39672260	(209284162)	+	(GCT)n	Simple_repeat	1	25	(0)	77178
673	15.0	10.3	0.0	chr1	39711642	39711781	(209244641)	+	LTR50	LTR/ERVL	1	156	(639)	77269
2165	21.4	2.2	2.8	chr1	39711807	39712350	(209244072)	C	MER74A	LTR/ERVL	(17)	541	1	77270
582	33.5	1.5	1.5	chr1	39882993	39883198	(209073224)	+	MIRb	SINE/MIR	56	261	(7)	77620
512	16.5	3.0	3.0	chr1	39902544	39902643	(209053779)	+	MIRb	SINE/MIR	109	208	(60)	77653
883	18.1	0.7	0.0	chr1	39902928	39903076	(209053346)	C	FRAM	SINE/Alu	(21)	155	6	77654
1355	26.0	6.9	11.9	chr1	40530882	40531159	(208425263)	+	L2	LINE/L2	1799	2041	(1378)	78998
300	29.3	4.3	4.8	chr1	40531160	40531324	(208425098)	+	L2-3_Crp	LINE/L2	844	1007	(1089)	79002
330	26.2	16.3	8.9	chr1	40821671	40821850	(208134572)	C	L2a	LINE/L2	(7)	3419	3185	79573
216	22.6	3.1	1.6	chr1	40979134	40979196	(207977226)	+	L2b	LINE/L2	3307	3370	(5)	79987
324	30.3	7.8	6.6	chr1	41246365	41246633	(207709789)	+	Plat_L3	LINE/CR1	3036	3237	(349)	80419
587	32.1	8.7	1.8	chr1	41246645	41246974	(207709448)	C	L2c	LINE/L2	(4)	3383	3029	80420
212	32.3	1.6	6.8	chr1	41360168	41360300	(207596122)	C	L2b	LINE/L2	(215)	3160	3035	80661
293	35.4	7.8	0.4	chr1	41360376	41360541	(207595881)	+	L2a	LINE/L2	3201	3424	(2)	80665
786	18.1	9.8	0.6	chr1	41360624	41360790	(207595632)	+	MER5A	DNA/hAT-Charlie	1	184	(5)	80666
503	29.4	9.3	0.8	chr1	42963300	42963546	(205992876)	+	L2b	LINE/L2	2363	2632	(787)	83439
528	19.3	20.2	1.2	chr1	42963707	42963874	(205992548)	+	L1ME3A	LINE/L1	5836	6043	(130)	83440
1267	32.1	13.1	2.3	chr1	43522548	43523633	(205432789)	C	L2c	LINE/L2	(154)	3233	2005	84451
788	26.7	6.0	0.9	chr1	43650656	43650878	(205305544)	C	MIRb	SINE/MIR	(8)	260	26	84649
188	35.0	10.5	6.0	chr1	43708843	43709176	(205247246)	C	L2c	LINE/L2	(6)	3381	3031	84749
387	33.7	7.0	3.0	chr1	44029444	44029746	(204926676)	+	L2b	LINE/L2	3022	3337	(38)	85304
51	2.1	0.0	0.0	chr1	44047993	44048040	(204908382)	+	(TG)n	Simple_repeat	1	48	(0)	85333
17	13.5	0.0	0.0	chr1	44610414	44610446	(204345976)	+	(CCCATC)n	Simple_repeat	1	33	(0)	86365
540	20.4	0.0	0.0	chr1	44721624	44721711	(204234711)	+	AluJb	SINE/Alu	178	265	(47)	86565
685	12.5	0.0	1.8	chr1	44721786	44721899	(204234523)	C	U5	snRNA	(1)	115	4	86566
1001	16.8	11.2	0.0	chr1	44730709	44730899	(204225523)	+	AluSx4	SINE/Alu	7	221	(89)	86588
632	17.4	0.0	0.9	chr1	44731055	44731170	(204225252)	C	U5	snRNA	(1)	115	1	86589
2281	10.7	0.3	0.0	chr1	44779364	44779661	(204176761)	C	AluSp	SINE/Alu	(14)	299	1	86693
1426	17.4	5.9	2.7	chr1	44779662	44779804	(204176618)	C	AluJr	SINE/Alu	(166)	146	2	86692
757	24.1	2.4	0.6	chr1	44819664	44819825	(204136597)	C	AluSx	SINE/Alu	(35)	277	113	86771
588	11.6	2.1	0.0	chr1	44819903	44819997	(204136425)	C	U5	snRNA	(19)	97	1	86772
2510	5.2	0.7	1.6	chr1	45339206	45339513	(203616909)	C	AluSq2	SINE/Alu	(8)	305	1	87766
280	34.7	2.4	1.6	chr1	45339569	45339694	(203616728)	+	L2c	LINE/L2	2643	2769	(650)	87767
234	23.1	1.0	11.9	chr1	45339770	45339887	(203616535)	+	L2c	LINE/L2	3059	3163	(212)	87767
1079	19.4	9.8	16.5	chr1	45522401	45522751	(203433671)	+	LTR34	LTR/ERV1	1	291	(408)	88199
220	17.4	4.2	0.0	chr1	45687561	45687606	(203268816)	C	MIR3	SINE/MIR	(80)	128	81	88537
1484	14.6	0.9	0.4	chr1	45928570	45928795	(203027627)	C	AluJr	SINE/Alu	(0)	312	86	89042
1263	22.3	6.4	2.7	chr1	45928803	45929240	(203027182)	C	L1MC5	LINE/L1	(425)	8879	8425	89040
507	28.1	5.6	4.6	chr1	46442495	46442688	(202513734)	+	MIRb	SINE/MIR	46	241	(27)	90054
22	32.6	1.2	1.2	chr1	46520448	46520532	(202435890)	+	(CA)n	Simple_repeat	1	86	(0)	90185
19	22.7	0.0	0.0	chr1	46522733	46522773	(202433649)	+	(TG)n	Simple_repeat	1	41	(0)	90191
736	20.0	6.9	8.1	chr1	46719502	46719614	(202236808)	C	L2a	LINE/L2	(0)	3426	3316	90532
1013	16.2	2.6	2.6	chr1	46719615	46719804	(202236618)	+	MER53	DNA/hAT	1	190	(3)	90533
1085	24.2	16.1	6.3	chr1	46719805	46720209	(202236213)	C	L2a	LINE/L2	(111)	3315	2800	90532
36	5.3	0.0	0.0	chr1	46725544	46725583	(202230839)	+	(TG)n	Simple_repeat	1	40	(0)	90547
626	30.6	3.9	3.2	chr1	46725681	46725958	(202230464)	C	L2a	LINE/L2	(0)	3426	3107	90548
192	38.6	2.2	2.9	chr1	47182065	47182200	(201774222)	C	L2c	LINE/L2	(228)	3159	3025	91049
259	35.8	1.6	0.0	chr1	47182210	47182329	(201774093)	C	MIR3	SINE/MIR	(71)	137	16	91052
18	0.0	0.0	0.0	chr1	47226527	47226546	(201729876)	+	(CA)n	Simple_repeat	1	20	(0)	91122
2444	6.6	0.3	0.0	chr1	47335358	47335658	(201620764)	+	AluSq4	SINE/Alu	2	303	(8)	91370
2301	9.3	1.3	0.0	chr1	47335760	47336060	(201620362)	C	AluSg	SINE/Alu	(5)	305	1	91371
34	25.7	0.7	6.3	chr1	47533568	47533719	(201422703)	+	GA-rich	Low_complexity	1	143	(0)	91810
14	20.7	0.0	6.0	chr1	50332915	50332964	(198623458)	+	(CCCCAC)n	Simple_repeat	1	50	(0)	96594
16	13.3	0.0	2.9	chr1	50332944	50332978	(198623444)	+	(CCAGAA)n	Simple_repeat	1	35	(0)	96595
28	21.8	3.0	7.2	chr1	50968529	50968662	(197987760)	+	G-rich	Low_complexity	1	138	(0)	97721
15	10.0	0.0	7.9	chr1	50979198	50979235	(197977187)	+	A-rich	Low_complexity	1	38	(0)	97723
244	31.8	7.0	0.9	chr1	51519558	51519665	(197436757)	+	MIRb	SINE/MIR	88	202	(66)	98835
283	26.9	11.0	0.0	chr1	51519716	51519818	(197436604)	C	MIR3	SINE/MIR	(109)	159	45	98836
272	29.2	1.4	0.0	chr1	52703541	52703612	(196252810)	C	MIR3	SINE/MIR	(68)	140	68	101511
1018	13.4	0.0	0.0	chr1	52703632	52703773	(196252649)	+	AluSc8	SINE/Alu	148	289	(22)	101512
2265	11.9	0.3	0.0	chr1	52703783	52704084	(196252338)	+	AluSq2	SINE/Alu	1	303	(10)	101513
405	32.9	5.1	4.4	chr1	53322340	53322660	(195633762)	C	L2c	LINE/L2	(221)	3166	2829	102865
536	22.6	11.1	3.7	chr1	53889349	53889564	(195066858)	+	MIRb	SINE/MIR	9	242	(26)	103980
276	23.7	3.5	1.2	chr1	54052722	54052803	(194903619)	+	L2c	LINE/L2	3245	3355	(32)	104307
317	28.0	3.2	2.5	chr1	54200601	54200755	(194755667)	+	MIRb	SINE/MIR	30	193	(75)	104653
352	29.6	6.6	0.0	chr1	54200810	54200951	(194755471)	+	MIR3	SINE/MIR	42	193	(15)	104654
19	32.5	0.0	0.0	chr1	58782402	58782467	(190173955)	+	(CTG)n	Simple_repeat	1	66	(0)	113504
19	25.6	2.9	5.7	chr1	58782585	58782687	(190173735)	+	(GCTGCC)n	Simple_repeat	1	106	(0)	113505
261	24.1	1.7	19.7	chr1	67339596	67339825	(181616597)	C	MIRb	SINE/MIR	(13)	255	55	128660
22	11.7	1.9	5.7	chr1	70221460	70221511	(178734911)	+	(GCG)n	Simple_repeat	1	53	(0)	133042
20	22.2	0.0	0.0	chr1	70221683	70221729	(178734693)	+	(GCG)n	Simple_repeat	1	47	(0)	133043
2628	18.8	7.6	2.0	chr1	70628381	70629427	(178326995)	+	HERVL18-int	LTR/ERVL	9	1810	(4237)	133738
2656	2.7	0.0	1.4	chr1	71046012	71046306	(177910116)	+	AluYc3	SINE/Alu	1	291	(9)	134341
482	31.9	11.5	4.0	chr1	77704424	77704798	(171251624)	C	L1MEg	LINE/L1	(4857)	1227	821	143340
248	32.5	0.0	4.2	chr1	77704975	77705093	(171251329)	C	HAL1ME	LINE/L1	(2246)	219	106	143341
15	11.0	7.3	2.3	chr1	84690710	84690750	(164265672)	+	(CTGCGG)n	Simple_repeat	1	44	(0)	152920
12	22.7	5.7	1.8	chr1	84690818	84690870	(164265552)	+	G-rich	Low_complexity	1	56	(0)	152921
461	22.4	17.1	0.0	chr1	89545902	89546071	(159410351)	+	L1MC5	LINE/L1	9091	9295	(9)	160002
228	29.4	6.3	2.5	chr1	91732124	91732245	(157224177)	C	MIR3	SINE/MIR	(4)	204	78	163159
971	19.5	1.1	0.0	chr1	91732303	91732487	(157223935)	C	MER5A	DNA/hAT-Charlie	(1)	188	2	163160
1938	11.9	9.6	0.3	chr1	92299868	92300179	(156656243)	C	Tigger3a	DNA/TcMar-Tigger	(4)	344	1	164221
489	26.8	9.9	2.1	chr1	92922655	92922887	(156033535)	C	L1M6	LINE/L1	(4618)	1878	1626	165357
14	15.4	6.7	2.1	chr1	93680930	93680974	(155275448)	+	(CCTTC)n	Simple_repeat	1	48	(0)	166665
488	5.5	0.0	14.1	chr1	93847573	93847657	(155108765)	+	tRNA-Arg-AGA	tRNA	1	73	(3)	166925
13	5.3	0.0	0.0	chr1	99970237	99970256	(148986166)	+	(GGA)n	Simple_repeat	1	20	(0)	175723
36	0.0	0.0	0.0	chr1	100351974	100352004	(148604418)	+	(GT)n	Simple_repeat	1	31	(0)	176447
15	10.8	3.3	0.0	chr1	100352058	100352087	(148604335)	+	(AGAAAG)n	Simple_repeat	1	31	(0)	176448
1939	17.4	0.0	0.3	chr1	101257612	101257910	(147698512)	+	AluJb	SINE/Alu	1	298	(14)	177764
214	33.7	12.7	2.8	chr1	108080471	108080977	(140875445)	+	L2b	LINE/L2	688	1252	(2167)	186325
910	16.4	0.0	0.0	chr1	108559288	108559427	(140396995)	C	AluYc	SINE/Alu	(15)	284	145	186917
204	38.1	3.0	0.0	chr1	108746129	108746225	(140210197)	+	L2b	LINE/L2	3245	3344	(31)	187257
2463	7.7	0.3	0.0	chr1	108876391	108876702	(140079720)	C	AluSp	SINE/Alu	(0)	313	1	187485
2440	8.7	0.7	1.7	chr1	108963747	108964044	(139992378)	C	AluSx	SINE/Alu	(17)	295	1	187651
1812	15.4	4.6	1.4	chr1	109216628	109216920	(139739502)	C	AluJb	SINE/Alu	(7)	305	3	188242
260	26.7	6.5	14.8	chr1	109283698	109283899	(139672523)	+	MIRb	SINE/MIR	5	188	(80)	188334
446	22.5	4.3	1.8	chr1	109388714	109388826	(139567596)	C	MIRb	SINE/MIR	(61)	207	92	188504
13	18.3	4.3	4.1	chr1	109397924	109397970	(139558452)	+	(CCGC)n	Simple_repeat	1	49	(0)	188516
275	23.8	7.3	1.0	chr1	109789852	109789953	(139166469)	+	MamGypLTR3	LTR/Gypsy	243	351	(543)	189080
320	26.3	7.7	0.7	chr1	112956706	112956908	(135999514)	+	MIR	SINE/MIR	17	237	(31)	194127
28	0.0	0.0	0.0	chr1	113044394	113044419	(135912003)	+	(AAT)n	Simple_repeat	1	26	(0)	194353
892	20.2	3.0	1.8	chr1	113044863	113045028	(135911394)	C	MER45A	DNA/hAT-Tip100	(10)	168	1	194354
12	17.3	7.7	0.0	chr1	113390400	113390468	(135565954)	+	(GCGGC)n	Simple_repeat	1	74	(0)	194977
29	6.4	3.9	1.9	chr1	114511648	114511704	(134444718)	+	(TTTGTT)n	Simple_repeat	1	58	(0)	196727
42	0.0	0.0	0.0	chr1	115641291	115641326	(133315096)	+	(GT)n	Simple_repeat	1	36	(0)	198477
22	0.0	0.0	0.0	chr1	115641538	115641561	(133314861)	+	(TG)n	Simple_repeat	1	24	(0)	198478
50	2.2	0.0	0.0	chr1	116687595	116687641	(132268781)	+	(GT)n	Simple_repeat	1	47	(0)	200110
3067	23.4	6.1	6.8	chr1	116934446	116935220	(132021202)	C	L1MEg	LINE/L1	(5193)	1007	243	200516
407	31.7	11.5	4.3	chr1	116935224	116935480	(132020942)	C	L1MEg	LINE/L1	(5764)	436	159	200516
213	24.1	1.6	2.8	chr1	117060732	117060815	(131895607)	+	MIR3	SINE/MIR	64	147	(115)	200698
45	2.3	0.0	0.0	chr1	117367314	117367358	(131589064)	+	(GAG)n	Simple_repeat	1	45	(0)	201206
2284	11.3	0.0	0.3	chr1	117610526	117610826	(131345596)	C	AluSc	SINE/Alu	(9)	300	1	201573
377	27.9	0.0	0.0	chr1	119859851	119859936	(129096486)	C	LTR16B2	LTR/ERVL	(376)	86	1	204665
598	27.2	6.0	2.3	chr1	119859940	119860116	(129096306)	C	ERVL-E-int	LTR/ERVL	(3748)	1919	1736	204666
619	4.0	0.0	0.0	chr1	120844262	120844335	(128112087)	C	tRNA-Asn-AAC	tRNA	(3)	74	1	206153
1273	6.1	0.0	1.8	chr1	120850818	120850985	(128105437)	C	U1	snRNA	(0)	165	1	206170
961	20.0	0.0	0.0	chr1	120942600	120942764	(128013658)	+	U1	snRNA	1	165	(0)	206303
267	23.3	1.9	9.5	chr1	120942901	120943016	(128013406)	+	AluSz	SINE/Alu	16	122	(190)	206304
940	20.8	17.4	10.4	chr1	143720101	143720503	(105235919)	C	LTR4	LTR/ERV1	(111)	485	49	208223
608	22.2	0.0	2.3	chr1	143720514	143720642	(105235780)	C	U1	snRNA	(37)	128	3	208224
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
631	21.4	3.6	3.0	chr1	144523858	144524021	(104432401)	C	U1	snRNA	(0)	165	1	209540
1290	7.3	0.0	0.6	chr1	144551779	144551943	(104404479)	C	U1	snRNA	(1)	164	1	209607
1305	7.9	0.0	0.6	chr1	145281116	145281281	(103675141)	+	U1	snRNA	1	165	(0)	210764
1344	19.3	5.5	1.4	chr1	146035370	146035649	(102920773)	C	AluJb	SINE/Alu	(14)	298	7	211987
634	0.0	0.0	0.0	chr1	146035692	146035763	(102920659)	+	tRNA-Glu-GAG_	tRNA	1	72	(3)	211988
1539	23.1	6.3	4.7	chr1	146036376	146036870	(102919552)	C	L1ME4b	LINE/L1	(9)	883	380	211990
666	0.0	0.0	0.0	chr1	146037061	146037132	(102919290)	+	tRNA-Gly-GGA	tRNA	1	72	(3)	211991
1391	13.4	6.5	6.5	chr1	146038261	146038383	(102918039)	+	AluJb	SINE/Alu	1	125	(187)	211994
2616	5.3	0.0	0.0	chr1	146038384	146038685	(102917737)	C	AluSg	SINE/Alu	(8)	302	1	211995
220	22.9	3.7	11.0	chr1	146051838	146051955	(102904467)	C	AluSg4	SINE/Alu	(190)	120	12	212031
1276	9.2	0.0	0.0	chr1	146052081	146052244	(102904178)	C	U1	snRNA	(1)	164	1	212032
379	34.1	3.7	0.0	chr1	146387447	146387575	(102568847)	+	U1	snRNA	2	135	(30)	212560
566	19.4	6.1	4.3	chr1	146409903	146410064	(102546358)	+	U1	snRNA	1	165	(0)	212614
784	15.9	14.8	0.0	chr1	147084619	147084756	(101871666)	C	U1	snRNA	(3)	162	1	213627
935	11.7	9.3	0.0	chr1	147245697	147245833	(101710589)	C	AluJr	SINE/Alu	(17)	295	145	213844
4641	16.0	9.3	6.6	chr1	147245834	147246995	(101709427)	C	L1MD1	LINE/L1	(48)	6585	5369	213845
26048	3.0	0.4	0.0	chr1	147321799	147327814	(101628608)	C	L1PA3	LINE/L1	(0)	6155	124	213945
14003	9.3	1.9	0.4	chr1	147327826	147330711	(101625711)	+	L1PA8A	LINE/L1	3520	6446	(0)	213938
402	28.8	1.4	1.1	chr1	147495241	147495370	(101461052)	C	MIRc	SINE/MIR	(51)	157	28	214166
273	33.5	10.7	0.7	chr1	147495366	147495514	(101460908)	+	MIRb	SINE/MIR	6	169	(99)	214167
620	20.9	6.1	1.9	chr1	148263477	148263632	(100692790)	+	U1	snRNA	2	164	(1)	215389
654	1.4	0.0	0.0	chr1	148265108	148265179	(100691243)	C	tRNA-Gln-CAG	tRNA	(3)	72	1	215393
1359	4.3	1.2	0.0	chr1	148388490	148388651	(100567771)	C	U1	snRNA	(1)	164	1	215621
674	0.0	0.0	0.0	chr1	148529257	148529331	(100427091)	+	tRNA-Asn-AAC	tRNA	1	75	(2)	215855
1017	20.6	0.0	0.0	chr1	149636766	149636930	(99319492)	+	U1	snRNA	1	165	(0)	217501
312	22.4	1.6	11.2	chr1	149637049	149637182	(99319240)	+	AluSz	SINE/Alu	2	122	(190)	217502
17	21.1	0.0	2.2	chr1	150976596	150976609	(97979813)	+	(TCTT)n	Simple_repeat	1	41	(0)	220236
16	17.6	0.0	0.0	chr1	150976610	150976636	(97979786)	+	(T)n	Simple_repeat	1	27	(0)	220237
1315	11.6	5.0	0.0	chr1	150976662	150976868	(97979554)	C	AluJb	SINE/Alu	(84)	228	11	220238
221	25.8	1.5	1.5	chr1	151061534	151061600	(97894822)	C	MIRb	SINE/MIR	(14)	254	188	220408
2350	6.6	0.0	3.0	chr1	151069597	151069897	(97886525)	+	AluSx1	SINE/Alu	1	292	(20)	220418
2553	6.5	0.0	0.0	chr1	151069898	151070207	(97886215)	+	AluY	SINE/Alu	1	310	(1)	220419
973	4.8	1.6	0.0	chr1	153603958	153604083	(95352339)	+	MER61-int	LTR/ERV1	2958	3085	(2132)	224389
8647	13.2	5.0	1.2	chr1	153604083	153605478	(95350944)	+	HUERS-P3b-int	LTR/ERV1	5961	7411	(7)	224390
504	9.1	0.0	0.0	chr1	153671590	153671655	(95284767)	C	AluSq10	SINE/Alu	(246)	67	2	224507
723	10.6	3.4	0.0	chr1	153671656	153671768	(95284654)	C	L1PB2	LINE/L1	(39)	6112	5996	224508
1729	12.1	10.0	4.7	chr1	154477919	154478137	(94478285)	C	L1MB2	LINE/L1	(136)	6035	5789	226270
554	14.9	0.0	0.0	chr1	155226863	155226965	(93729457)	C	FLAM_C	SINE/Alu	(90)	212	38	227580
59	9.6	1.1	0.0	chr1	155244786	155244875	(93711547)	+	(GAGA)n	Simple_repeat	1	91	(0)	227608
819	23.3	0.6	0.0	chr1	156193275	156193437	(92762985)	+	FRAM	SINE/Alu	3	166	(10)	229675
1958	10.3	5.9	1.0	chr1	156193472	156193761	(92762661)	C	AluSx	SINE/Alu	(7)	305	1	229676
12	20.4	0.0	2.8	chr1	157045373	157045408	(91911014)	+	(CTCCCT)n	Simple_repeat	1	36	(0)	231175
13	16.3	0.0	5.3	chr1	157045603	157045640	(91910782)	+	G-rich	Low_complexity	1	38	(0)	231176
19	26.6	0.0	0.0	chr1	157045824	157045877	(91910545)	+	(CCTC)n	Simple_repeat	1	54	(0)	231177
7698	15.1	0.8	0.9	chr1	158145374	158146566	(90809856)	C	MER70-int	LTR/ERVL	(3832)	1191	1	232744
248	32.8	10.5	1.5	chr1	159900673	159900802	(89055620)	+	MER5A	DNA/hAT-Charlie	1	143	(46)	234920
240	23.5	4.2	1.4	chr1	161178048	161178116	(87778306)	C	Charlie16a	DNA/hAT-Charlie	(206)	136	66	237007
688	0.0	0.0	0.0	chr1	161399700	161399772	(87556650)	C	tRNA-Val-GTG	tRNA	(3)	73	1	237470
642	0.0	0.0	0.0	chr1	161422093	161422164	(87534258)	C	tRNA-Glu-GAA	tRNA	(3)	72	1	237515
6644	8.0	2.8	2.5	chr1	161422259	161424316	(87532106)	+	SVA_D	Retroposon/SVA	14	1386	(0)	237516
681	0.0	0.0	0.0	chr1	161428077	161428150	(87528272)	C	tRNA-Asn-AAC	tRNA	(3)	74	1	237526
192	26.0	0.0	0.0	chr1	161530028	161530077	(87426345)	+	L2a	LINE/L2	3377	3426	(0)	237671
583	9.6	0.0	0.0	chr1	161530342	161530424	(87425998)	C	tRNA-Leu-CTG	tRNA	(3)	83	1	237672
660	0.0	0.0	0.0	chr1	161531113	161531184	(87425238)	+	tRNA-Gly-GGA	tRNA	1	72	(3)	237673
12	10.0	0.0	0.0	chr1	161531389	161531410	(87425012)	+	(TTCC)n	Simple_repeat	1	22	(0)	237674
645	1.4	0.0	0.0	chr1	161540241	161540314	(87416108)	+	tRNA-Asn-AAC	tRNA	1	74	(3)	237691
503	10.0	0.0	0.0	chr1	161612718	161612787	(87343635)	+	tRNA-Gly-GGA	tRNA	1	70	(5)	237810
12	10.0	0.0	0.0	chr1	161612969	161612990	(87343432)	+	(TTCC)n	Simple_repeat	1	22	(0)	237811
12	25.5	0.0	0.0	chr1	161726750	161726786	(87229636)	+	(CGCGG)n	Simple_repeat	1	37	(0)	237995
13	19.8	0.0	2.7	chr1	162561644	162561680	(86394742)	+	(GCCCCC)n	Simple_repeat	1	37	(0)	239384
12	8.4	0.0	6.9	chr1	165631569	165631597	(83324825)	+	(CCTT)n	Simple_repeat	1	29	(0)	243994
33	0.0	2.6	2.5	chr1	165698032	165698070	(83258352)	+	(AAAC)n	Simple_repeat	1	40	(0)	244108
746	32.3	13.1	3.3	chr1	166705221	166705697	(82250725)	C	LTR16E1	LTR/ERVL	(12)	526	3	245632
402	28.4	0.9	0.0	chr1	166705698	166705806	(82250616)	C	L2a	LINE/L2	(269)	3157	3048	245633
233	35.5	4.7	2.4	chr1	166705812	166705935	(82250487)	C	L2a	LINE/L2	(544)	2875	2749	245633
639	25.1	11.9	1.8	chr1	166705945	166706334	(82250088)	+	L1MEd	LINE/L1	817	1251	(5852)	245634
29	7.2	4.5	5.8	chr1	167630161	167630226	(81326196)	+	(CCTC)n	Simple_repeat	1	69	(0)	247029
23	14.2	2.7	7.9	chr1	167630227	167630234	(81326188)	+	(CCT)n	Simple_repeat	1	70	(0)	247030
654	0.0	0.0	0.0	chr1	167714725	167714796	(81241626)	+	tRNA-Pro-CCG	tRNA	1	72	(3)	247181
658	0.0	0.0	0.0	chr1	167715488	167715559	(81240863)	C	tRNA-Pro-CCY	tRNA	(3)	72	1	247182
18631	10.8	0.9	0.9	chr1	167866781	167869426	(81086996)	+	Harlequin-int	LTR/ERV1	4249	6896	(0)	247452
15969	18.5	5.7	3.5	chr1	168159212	168161932	(80794490)	C	L1MA5A	LINE/L1	(3222)	4340	906	247903
1148	13.7	0.0	0.0	chr1	168225441	168225608	(80730814)	C	AluJo	SINE/Alu	(11)	301	134	248046
15	0.0	0.0	4.3	chr1	169485720	169485742	(79470680)	+	(GCC)n	Simple_repeat	1	23	(0)	250009
2497	4.3	0.0	0.3	chr1	173825486	173825767	(75130655)	C	AluY	SINE/Alu	(29)	282	2	256155
2590	4.4	0.0	0.7	chr1	173825941	173826238	(75130184)	+	AluY	SINE/Alu	1	296	(15)	256156
842	31.1	9.9	4.8	chr1	175749658	175750069	(73206353)	+	MLT1K	LTR/ERVL-MaLR	131	565	(30)	259151
14	33.3	1.4	1.4	chr1	176207201	176207269	(72749153)	+	(CCG)n	Simple_repeat	1	70	(0)	259874
15	20.5	5.1	0.0	chr1	176207252	176207310	(72749112)	+	(GC)n	Simple_repeat	1	62	(0)	259875
13	19.5	0.0	2.7	chr1	178726029	178726065	(70230357)	+	G-rich	Low_complexity	1	37	(0)	263569
2320	6.0	3.1	0.3	chr1	179046721	179047004	(69909418)	+	AluSq2	SINE/Alu	1	292	(21)	264050
2132	14.2	0.0	1.0	chr1	182299501	182299809	(66656613)	+	AluSx1	SINE/Alu	1	306	(6)	269194
64	24.1	0.9	4.8	chr1	182299813	182299996	(66656426)	+	GA-rich	Low_complexity	1	176	(0)	269195
650	26.4	9.4	2.0	chr1	182791588	182791881	(66164541)	C	Charlie19a	DNA/hAT-Charlie	(47)	339	22	270064
56	30.0	0.0	0.0	chr1	185156495	185156656	(63799766)	+	G-rich	Low_complexity	1	162	(0)	273834
8278	9.9	1.6	0.7	chr1	192977227	192978516	(55977906)	+	Charlie3	DNA/hAT-Charlie	1	1348	(1358)	284173
225	26.3	1.7	0.0	chr1	193058925	193058981	(55897441)	C	L2b	LINE/L2	(51)	3324	3267	284287
332	30.7	9.3	2.4	chr1	194858660	194858829	(54097593)	+	HAL1ME	LINE/L1	807	989	(1476)	286681
9111	6.7	14.1	0.6	chr1	194858883	194860246	(54096176)	+	LTR12C	LTR/ERV1	2	1579	(0)	286682
15	7.6	3.6	0.0	chr1	197902930	197902957	(51053465)	+	(CCCGC)n	Simple_repeat	1	29	(0)	290519
19	7.3	0.0	0.0	chr1	200669893	200669921	(48286501)	+	(GGAGC)n	Simple_repeat	1	29	(0)	294760
14	10.0	2.8	5.4	chr1	200670033	200670068	(48286354)	+	G-rich	Low_complexity	1	37	(0)	294761
2470	8.1	0.0	0.3	chr1	201954809	201955118	(47001304)	+	AluSx3	SINE/Alu	1	309	(2)	296923
46	21.2	3.1	4.8	chr1	201955119	201955207	(47001215)	+	A-rich	Low_complexity	71	157	(0)	296924
688	28.7	15.4	2.2	chr1	202076594	202076991	(46879431)	C	L2a	LINE/L2	(0)	3426	2963	297210
2129	9.4	1.7	1.4	chr1	202803547	202803833	(46152589)	+	AluSq2	SINE/Alu	6	293	(20)	298514
15	20.0	1.5	7.5	chr1	202808003	202808068	(46148354)	+	(CCCGCCC)n	Simple_repeat	1	67	(0)	298519
273	15.7	0.0	1.9	chr1	202958728	202958779	(45997643)	C	L2b	LINE/L2	(9)	3366	3316	298818
2724	7.8	11.4	6.6	chr1	203006140	203006595	(45949827)	+	LTR21A	LTR/ERV1	1	481	(0)	298911
13	12.4	5.4	2.6	chr1	203164613	203164649	(45791773)	+	(GGAGATG)n	Simple_repeat	1	39	(0)	299164
365	25.0	5.0	6.4	chr1	203164786	203164926	(45791496)	+	MIRc	SINE/MIR	68	206	(62)	299165
46	12.3	0.0	0.0	chr1	203306796	203306875	(45649547)	+	(AC)n	Simple_repeat	1	80	(0)	299386
29	3.2	0.0	0.0	chr1	204412048	204412079	(44544343)	+	(G)n	Simple_repeat	1	32	(0)	301493
1094	16.0	1.6	0.6	chr1	204412256	204412437	(44543985)	C	MER2	DNA/TcMar-Tigger	(22)	323	140	301494
696	19.4	4.0	0.0	chr1	204506878	204507021	(44449401)	+	L1MA8	LINE/L1	6142	6291	(0)	301658
661	2.7	0.0	0.0	chr1	204507028	204507102	(44449320)	C	tRNA-Lys-AAA	tRNA	(1)	75	1	301659
2282	8.9	0.3	1.0	chr1	204516958	204517261	(44439161)	+	AluSx	SINE/Alu	1	302	(10)	301692
205	28.1	6.6	5.8	chr1	204673029	204673149	(44283273)	+	Tigger19a	DNA/TcMar-Tigger	72	193	(130)	302049
214	28.3	0.0	1.9	chr1	204673160	204673213	(44283209)	+	L2c	LINE/L2	3334	3386	(1)	302050
310	15.2	11.9	0.0	chr1	204806892	204806950	(44149472)	C	MER63D	DNA/hAT-Blackjack	(994)	67	1	302303
13	24.5	0.0	6.7	chr1	205321319	205321378	(43635044)	+	(CCGCCGC)n	Simple_repeat	1	60	(0)	303213
715	26.7	7.8	3.0	chr1	205750878	205751109	(43205313)	+	MIR	SINE/MIR	9	252	(10)	304034
2107	12.8	0.3	0.0	chr1	206543755	206544051	(42412371)	C	AluSg	SINE/Alu	(12)	298	1	305271
309	31.4	0.2	5.0	chr1	206544088	206544224	(42412198)	+	MIRb	SINE/MIR	18	151	(117)	305272
4699	13.5	11.5	0.3	chr1	207625489	207626216	(41330206)	C	LTR8B	LTR/ERV1	(0)	820	1	306928
268	27.8	4.3	7.6	chr1	207626217	207626227	(41330195)	C	X7B_LINE	LINE/CR1	(130)	120	112	306927
2091	24.5	3.0	6.0	chr1	207673601	207674364	(41282058)	+	L1ME1	LINE/L1	5428	6167	(12)	306994
1324	15.8	8.1	0.4	chr1	207826211	207826439	(41129983)	C	LTR9B	LTR/ERV1	(0)	644	397	307174
6351	14.6	3.7	0.4	chr1	211222132	211223100	(37733322)	C	LTR5B	LTR/ERVK	(0)	1002	1	312309
11	24.2	5.5	1.7	chr1	211578781	211578835	(37377587)	+	(CGCCGCG)n	Simple_repeat	1	58	(0)	312974
12	12.2	3.7	0.0	chr1	211578815	211578841	(37377581)	+	(GCCGC)n	Simple_repeat	1	28	(0)	312975
17	13.9	0.0	6.7	chr1	211578934	211578978	(37377444)	+	(CCGGAG)n	Simple_repeat	1	45	(0)	312976
318	21.1	11.6	1.6	chr1	211614606	211614728	(37341694)	C	MIRb	SINE/MIR	(52)	156	17	313049
340	29.4	9.7	6.2	chr1	212860542	212860795	(36095627)	+	L2a	LINE/L2	3142	3386	(1)	315334
362	33.8	9.3	3.4	chr1	212860888	212861363	(36095059)	+	L2c	LINE/L2	2656	3161	(214)	315335
3729	9.0	0.9	2.0	chr1	213045117	213045663	(35910759)	C	LTR14	LTR/ERVK	(2)	546	6	315626
3339	9.1	1.0	2.2	chr1	213045665	213046160	(35910262)	C	LTR14	LTR/ERVK	(58)	490	1	315627
15	11.6	0.0	3.3	chr1	213051371	213051400	(35905022)	+	(GGC)n	Simple_repeat	1	30	(0)	315638
1080	30.3	8.0	4.3	chr1	219883792	219884190	(29072232)	+	L2	LINE/L2	1800	2224	(1195)	325269
258	28.6	4.7	10.8	chr1	219884193	219884240	(29072182)	+	L2-1_AMi	LINE/L2	286	332	(903)	325271
1060	20.5	3.2	2.9	chr1	219884241	219884552	(29071870)	+	MER5C	DNA/hAT-Charlie	1	313	(0)	325272
12	19.3	0.0	5.1	chr1	220094064	220094102	(28862320)	+	(CCGCC)n	Simple_repeat	1	39	(0)	325675
187	31.3	7.5	2.9	chr1	220272863	220272964	(28683458)	+	L2c	LINE/L2	3160	3266	(121)	325957
403	27.3	7.7	0.0	chr1	220272994	220273136	(28683286)	C	L2a	LINE/L2	(0)	3426	3272	325958
14	5.0	0.0	0.0	chr1	224183257	224183277	(24773145)	+	(GCC)n	Simple_repeat	1	21	(0)	331975
13	14.6	8.5	2.0	chr1	224357171	224357217	(24599205)	+	(CTGCC)n	Simple_repeat	1	51	(0)	332414
17	23.8	3.6	0.0	chr1	224434953	224435007	(24521415)	+	(CCGACC)n	Simple_repeat	1	57	(0)	332552
345	26.5	3.9	0.0	chr1	224504028	224504125	(24452297)	+	MIRc	SINE/MIR	107	208	(60)	332679
14	18.3	2.5	2.4	chr1	225427783	225427822	(23528600)	+	GA-rich	Low_complexity	1	41	(0)	333957
200	30.8	10.1	3.6	chr1	225777463	225777600	(23178822)	+	L2c	LINE/L2	3231	3378	(9)	334567
2611	17.8	10.8	7.2	chr1	225996609	225997251	(22959171)	C	LTR65	LTR/ERV1	(0)	669	1	334980
2201	8.3	1.4	0.0	chr1	228103519	228103807	(20852615)	+	AluSz	SINE/Alu	1	293	(19)	338294
645	15.3	17.5	0.0	chr1	228103818	228103954	(20852468)	+	FRAM	SINE/Alu	1	166	(10)	338295
49	22.9	3.8	3.6	chr1	228276059	228276243	(20680179)	+	GA-rich	Low_complexity	1	192	(0)	338519
34	0.0	0.0	0.0	chr1	228458656	228458684	(20497738)	+	(GT)n	Simple_repeat	1	29	(0)	338742
2188	8.2	0.7	1.0	chr1	228486230	228486535	(20469887)	+	AluSg	SINE/Alu	1	305	(5)	338796
15	15.5	2.0	6.0	chr1	228487917	228487965	(20468457)	+	(GCCCTGC)n	Simple_repeat	1	50	(0)	338799
1036	10.6	0.0	0.0	chr1	228502787	228502937	(20453485)	+	PRIMA4_LTR	LTR/ERV1	444	594	(0)	338821
862	15.8	0.7	2.6	chr1	228502938	228503092	(20453330)	C	MLT1A0	LTR/ERVL-MaLR	(212)	153	2	338822
229	17.6	11.9	2.6	chr1	228503093	228503166	(20453256)	C	MLT1D	LTR/ERVL-MaLR	(334)	171	90	338823
935	19.5	12.5	0.0	chr1	229514828	229515048	(19441374)	C	MER58B	DNA/hAT-Charlie	(53)	288	36	340409
16	20.3	0.0	2.4	chr1	230066975	230067016	(18889406)	+	(CCCCGC)n	Simple_repeat	1	42	(0)	341372
4577	19.8	7.0	2.2	chr1	230804463	230806563	(18149859)	+	L1M4a1	LINE/L1	1815	3702	(2680)	342445
1709	21.3	5.0	9.0	chr1	230984511	230985152	(17971270)	C	LTR6A	LTR/ERV1	(0)	564	1	342729
132	12.2	1.8	0.9	chr1	231045809	231046032	(17910390)	+	(GAAA)n	Simple_repeat	1	228	(0)	342817
3216	9.5	3.9	0.2	chr1	231046084	231046528	(17909894)	C	LTR2	LTR/ERV1	(0)	463	2	342818
619	24.4	7.7	0.6	chr1	231422715	231422871	(17533551)	C	MIRb	SINE/MIR	(96)	172	4	343475
4509	13.8	1.3	1.7	chr1	233665264	233665973	(15290449)	C	LTR62	LTR/ERVL	(2)	707	1	346733
26435	10.2	2.6	3.0	chr1	233725526	233729409	(15227013)	C	MER61-int	LTR/ERV1	(0)	5217	1341	346827
21	27.5	1.1	4.4	chr1	234610078	234610167	(14346255)	+	(CGC)n	Simple_repeat	1	91	(0)	348167
35	25.3	1.0	2.0	chr1	234724082	234724179	(14232243)	+	GA-rich	Low_complexity	1	99	(0)	348335
2036	23.4	5.5	3.5	chr1	234866282	234866450	(14089972)	C	MLT1F	LTR/ERVL-MaLR	(382)	166	1	348566
257	37.9	2.5	0.7	chr1	234866731	234866884	(14089538)	+	LTR88c	LTR/Gypsy?	142	298	(564)	348568
2436	8.6	0.0	0.0	chr1	234866905	234867208	(14089214)	+	AluSx1	SINE/Alu	1	304	(8)	348569
323	27.0	19.7	0.0	chr1	234876693	234876851	(14079571)	+	MIRb	SINE/MIR	3	200	(68)	348586
246	19.8	4.9	0.9	chr1	235078154	235078768	(13877654)	+	(TG)n	Simple_repeat	1	645	(0)	348979
426	19.8	1.0	0.0	chr1	235161595	235161690	(13794732)	+	L1MC4	LINE/L1	7946	8042	(0)	349156
2426	8.1	0.0	0.7	chr1	235505383	235505689	(13450733)	C	AluSx1	SINE/Alu	(7)	305	1	349878
2138	11.9	2.3	0.0	chr1	236349833	236350127	(12606295)	+	AluSx	SINE/Alu	4	305	(7)	351440
4874	6.0	6.8	9.6	chr1	236350128	236350403	(12606019)	C	MER4E	LTR/ERV1	(491)	275	1	351439
1861	9.0	0.7	7.0	chr1	236350404	236350564	(12605858)	C	AluSx	SINE/Alu	(157)	155	11	351438
2014	10.6	0.0	0.0	chr1	241735534	241735788	(7220634)	C	AluSz	SINE/Alu	(11)	301	47	359748
42	21.2	0.0	2.9	chr1	241735789	241735855	(7220567)	+	(CT)n	Simple_repeat	2	67	(0)	359749
41	0.0	0.0	0.0	chr1	241735856	241735890	(7220532)	+	(TG)n	Simple_repeat	1	35	(0)	359750
42	21.2	0.0	2.9	chr1	241735891	241735904	(7220518)	+	(CT)n	Simple_repeat	2	14	(0)	359751
23	20.3	0.0	1.9	chr1	241833926	241833979	(7122443)	+	(CCCT)n	Simple_repeat	1	54	(0)	359914
2176	7.2	0.7	0.0	chr1	244833995	244834271	(4122151)	C	AluSq4	SINE/Alu	(31)	280	2	364891
24	23.7	4.7	1.1	chr1	244864370	244864458	(4091964)	+	(GGCTGC)n	Simple_repeat	1	92	(0)	364914
13	18.0	7.7	1.8	chr1	244969866	244969917	(3986505)	+	G-rich	Low_complexity	1	56	(0)	365185
2074	13.3	4.7	0.0	chr1	246579488	246579773	(2376649)	+	AluSx1	SINE/Alu	2	301	(11)	367715
188	21.9	0.0	0.0	chr1	246579877	246579917	(2376505)	C	MIRc	SINE/MIR	(46)	222	182	367716
916	26.5	9.4	1.3	chr1	246582795	246583096	(2373326)	C	LTR102_Mam	LTR/ERVL	(196)	655	327	367722
13	29.0	1.8	1.8	chr1	247111539	247111594	(1844828)	+	(GCG)n	Simple_repeat	1	57	(0)	368665
16	17.7	1.7	6.8	chr1	247857488	247857545	(1098877)	+	G-rich	Low_complexity	1	59	(0)	369730
608	0.0	0.0	21.5	chr1	248873855	248873961	(82461)	+	tRNA-Leu-TTG	tRNA	1	84	(2)	370918
629	1.4	0.0	0.0	chr1	248874248	248874319	(82103)	+	tRNA-Glu-GAG_	tRNA	1	72	(3)	370919
289	26.6	6.7	1.4	chr1	248891082	248891222	(65200)	C	MER112	DNA/hAT-Charlie	(66)	195	47	370951
359	33.9	7.2	1.6	chr10	3740571	3740753	(130056669)	+	MIR	SINE/MIR	51	244	(18)	375497
2001	27.2	1.2	1.4	chr10	4867952	4868465	(128928957)	C	L1M2a	LINE/L1	(6648)	520	8	377030
715	24.5	3.4	7.0	chr10	4981763	4982034	(128815388)	+	L1PBa	LINE/L1	532	793	(6070)	377179
349	25.0	8.5	0.0	chr10	5447572	5447679	(128349743)	+	L1ME1	LINE/L1	6054	6171	(8)	377783
22	15.2	4.8	3.1	chr10	5447749	5447810	(128349612)	+	(TTTGGT)n	Simple_repeat	1	65	(0)	377784
3716	12.0	8.5	1.8	chr10	5683542	5684272	(128113150)	+	Tigger3b	DNA/TcMar-Tigger	446	1230	(1)	378127
309	24.4	8.5	2.3	chr10	11710682	11710769	(122086653)	+	MIRb	SINE/MIR	99	192	(76)	387380
1429	16.1	3.1	4.7	chr10	11710781	11711079	(122086343)	+	L1MB2	LINE/L1	5834	6127	(44)	387381
2225	11.3	0.0	0.0	chr10	11711083	11711365	(122086057)	+	AluSx	SINE/Alu	1	283	(29)	387382
1047	10.3	0.0	0.0	chr10	12068364	12068499	(121728923)	C	AluSx	SINE/Alu	(176)	136	1	388081
2683	3.9	0.0	1.3	chr10	12128914	12129224	(121668198)	+	AluY	SINE/Alu	1	307	(4)	388251
16	11.7	5.4	0.0	chr10	12129500	12129536	(121667886)	+	G-rich	Low_complexity	1	39	(0)	388252
2725	15.4	3.9	2.6	chr10	14186089	14186589	(119610833)	+	LTR45C	LTR/ERV1	32	539	(0)	392045
199	26.0	13.5	0.0	chr10	14960106	14960201	(118837221)	C	MIR3	SINE/MIR	(34)	174	64	393370
13	14.3	0.0	5.7	chr10	15439919	15439953	(118357469)	+	A-rich	Low_complexity	1	35	(0)	394266
560	28.8	4.4	9.9	chr10	15440044	15440405	(118357017)	C	L2a	LINE/L2	(0)	3426	3086	394267
1766	28.7	12.9	3.5	chr10	17416108	17416954	(116380468)	+	L2a	LINE/L2	2042	2960	(459)	397335
2706	18.6	2.5	0.2	chr10	17425839	17426344	(116371078)	+	LTR53	LTR/ERVL	2	519	(0)	397359
994	26.2	7.6	4.9	chr10	17426345	17426685	(116370737)	C	LTR16C	LTR/ERVL	(116)	373	20	397356
304	28.9	12.4	6.0	chr10	18650606	18650771	(115146651)	+	MIRb	SINE/MIR	76	253	(15)	399432
237	17.8	2.2	0.0	chr10	18650827	18650871	(115146551)	+	L2c	LINE/L2	3290	3335	(52)	399434
12	18.4	0.0	9.6	chr10	21496082	21496133	(112301289)	+	(CCCT)n	Simple_repeat	1	52	(0)	403844
2760	5.7	13.0	0.8	chr10	21751374	21751765	(112045657)	C	LTR7	LTR/ERV1	(3)	447	1	404273
673	0.0	0.0	0.0	chr10	22229508	22229582	(111567840)	C	tRNA-Asn-AAC	tRNA	(2)	75	1	404961
12	19.9	2.3	4.4	chr10	22325817	22325860	(111471562)	+	(CCCGGC)n	Simple_repeat	1	45	(0)	405123
41	2.5	0.0	0.0	chr10	22712914	22712953	(111084469)	+	(GT)n	Simple_repeat	1	40	(0)	405675
1872	11.3	12.5	0.7	chr10	24568512	24568786	(109228636)	+	AluSx1	SINE/Alu	1	312	(0)	408694
13	13.5	4.3	6.2	chr10	27252856	27252901	(106544521)	+	(GCGCCGG)n	Simple_repeat	1	48	(0)	413156
607	17.8	1.0	0.0	chr10	30586506	30586606	(103210816)	C	MSTD	LTR/ERVL-MaLR	(49)	347	246	419041
1288	7.3	0.0	0.6	chr10	30586609	30586774	(103210648)	C	MER41-int	LTR/ERV1	(944)	5002	4838	419042
911	18.1	2.3	2.3	chr10	30586786	30586960	(103210462)	C	LTR9	LTR/ERV1	(0)	612	438	419043
187	27.7	0.0	3.0	chr10	32959855	32959921	(100837501)	+	L2b	LINE/L2	3311	3375	(0)	422531
1493	10.9	0.0	0.0	chr10	35240257	35240458	(98556964)	C	AluSx3	SINE/Alu	(0)	311	110	426243
6469	24.6	5.2	3.7	chr10	42543899	42546114	(91251308)	+	L1MB2	LINE/L1	341	2624	(4893)	432190
219	26.3	24.4	0.0	chr10	43396000	43396098	(90401324)	C	MER5A	DNA/hAT-Charlie	(4)	185	55	433408
388	22.4	2.7	2.7	chr10	43397906	43398015	(90399407)	+	L1MC5	LINE/L1	9165	9274	(30)	433411
2057	13.8	1.3	0.3	chr10	43398019	43398322	(90399100)	C	AluSc8	SINE/Alu	(4)	307	1	433412
1433	11.3	4.4	3.2	chr10	43407937	43408183	(90389239)	C	AluJb	SINE/Alu	(23)	289	40	433436
194	33.7	3.2	1.1	chr10	44885984	44886076	(88911346)	+	L2b	LINE/L2	3263	3357	(18)	435363
37	9.8	0.0	5.5	chr10	45495742	45495814	(88301608)	+	GA-rich	Low_complexity	1	73	(0)	436126
25	25.8	1.3	2.5	chr10	45495814	45495891	(88301531)	+	A-rich	Low_complexity	1	79	(0)	436127
3415	19.9	9.0	7.0	chr10	45495893	45497830	(88299592)	+	L1M4b	LINE/L1	2032	3892	(3114)	436128
456	19.5	3.7	3.3	chr10	46525398	46526683	(87270739)	+	(CA)n	Simple_repeat	1	1334	(0)	437801
36	32.4	0.8	0.0	chr10	49166583	49166725	(84630697)	+	GA-rich	Low_complexity	1	144	(0)	441538
1059	26.2	6.3	8.2	chr10	49182914	49183353	(84614069)	+	L1MC4	LINE/L1	7473	7901	(141)	441549
421	29.5	6.9	0.8	chr10	50314325	50314496	(83482926)	+	MIRb	SINE/MIR	9	188	(42)	443172
324	29.9	0.7	1.4	chr10	50314534	50314653	(83482769)	+	L1M5	LINE/L1	5613	5731	(393)	443173
4473	16.1	3.1	0.8	chr10	50550718	50551699	(83245723)	+	L1MC3	LINE/L1	6782	7785	(0)	443523
227	27.8	4.0	1.4	chr10	50554924	50554996	(83242426)	C	MIR3	SINE/MIR	(6)	202	128	443531
16	9.1	2.6	5.0	chr10	50623872	50623910	(83173512)	+	(CCCGCCG)n	Simple_repeat	1	40	(0)	443660
193	33.6	7.9	2.5	chr10	58266391	58266509	(75530913)	+	MIRc	SINE/MIR	21	146	(122)	453879
202	28.8	4.8	7.0	chr10	60300260	60300345	(73497077)	+	MamRTE1	LINE/RTE-BovB	677	760	(3052)	456861
16	15.9	0.0	0.0	chr10	60300927	60300954	(73496468)	+	(AC)n	Simple_repeat	1	28	(0)	456862
199	27.0	13.7	1.6	chr10	60978637	60978700	(72818722)	C	AmnSINE2	SINE/tRNA-Deu	(45)	313	241	457911
737	0.0	0.0	0.0	chr10	67764503	67764584	(66032838)	+	tRNA-Ser-TCA	tRNA	1	82	(3)	467832
19	14.2	0.0	0.0	chr10	67885479	67885509	(65911913)	+	(T)n	Simple_repeat	1	31	(0)	468133
2215	10.2	0.0	0.0	chr10	69179229	69179521	(64617901)	C	AluSx	SINE/Alu	(17)	295	3	471051
182	32.9	0.0	2.3	chr10	69180669	69180755	(64616667)	+	L2c	LINE/L2	3244	3328	(59)	471052
21	12.1	0.0	0.0	chr10	69318820	69318855	(64478567)	+	(GAG)n	Simple_repeat	1	36	(0)	471359
2147	7.5	2.3	0.7	chr10	70383111	70383404	(63414018)	+	AluSx1	SINE/Alu	1	299	(13)	473337
13	24.9	1.0	3.1	chr10	71319183	71319233	(62478189)	+	G-rich	Low_complexity	1	49	(0)	474994
756	11.1	8.6	4.2	chr10	71851561	71851704	(61945718)	+	AluSx3	SINE/Alu	1	151	(160)	476011
2020	12.1	0.0	1.9	chr10	71851828	71852134	(61945288)	+	AluSx4	SINE/Alu	1	301	(9)	476012
1940	12.6	0.4	1.1	chr10	71916446	71916716	(61880706)	+	AluSx	SINE/Alu	44	312	(0)	476189
7335	10.9	7.1	2.4	chr10	71916717	71918318	(61879104)	C	PABL_A-int	LTR/ERV1	(804)	4211	2545	476190
401	30.4	13.6	2.6	chr10	73456173	73456466	(60340956)	C	L2c	LINE/L2	(12)	3363	3055	479318
1482	16.2	4.2	4.2	chr10	73456498	73456858	(60340564)	+	L1MB8	LINE/L1	4807	5167	(979)	479319
2117	11.0	0.4	0.0	chr10	73810177	73810457	(59986965)	+	AluSx1	SINE/Alu	1	282	(30)	479967
16	14.4	2.5	2.4	chr10	73998373	73998412	(59799010)	+	G-rich	Low_complexity	1	41	(0)	480357
647	29.4	4.3	2.6	chr10	73998479	73998705	(59798717)	+	MIRb	SINE/MIR	30	260	(8)	480358
26	5.5	2.6	0.0	chr10	78973956	78973993	(54823429)	+	(CCCGG)n	Simple_repeat	1	39	(0)	488805
21	19.9	6.6	0.0	chr10	78974432	78974492	(54822930)	+	(TCTT)n	Simple_repeat	1	65	(0)	488806
28249	2.1	0.1	0.3	chr10	84279968	84286006	(49511416)	+	L1PA2	LINE/L1	124	6151	(4)	496619
2680	3.6	1.3	0.0	chr10	86535986	86536290	(47261132)	C	AluY	SINE/Alu	(2)	309	1	499686
605	26.7	7.1	2.5	chr10	89701886	89702085	(44095337)	+	MIR	SINE/MIR	51	260	(2)	504845
2367	9.2	0.0	0.7	chr10	92434805	92435107	(41362315)	+	AluSg	SINE/Alu	1	301	(9)	509118
221	32.3	0.0	4.1	chr10	92435228	92435324	(41362098)	+	MER5B	DNA/hAT-Charlie	1	93	(85)	509119
274	15.7	0.0	0.0	chr10	92594222	92594272	(41203150)	+	L1MC3	LINE/L1	7729	7779	(6)	509472
27922	4.3	0.1	0.2	chr10	95718161	95721637	(38075785)	C	HERV17-int	LTR/ERV1	(2724)	5902	2430	514801
11	17.2	7.7	0.0	chr10	96720027	96720065	(37077357)	+	(TCGCCTC)n	Simple_repeat	1	42	(0)	516502
437	28.9	3.8	0.7	chr10	97497898	97498050	(36299372)	+	MIRc	SINE/MIR	3	160	(108)	518102
792	34.7	8.8	4.3	chr10	100374124	100374725	(33422697)	C	L2	LINE/L2	(531)	2888	2256	523228
13	28.6	1.8	1.7	chr10	103368202	103368258	(30429164)	+	(CGCCGG)n	Simple_repeat	1	58	(0)	528833
12	24.6	1.7	5.1	chr10	119206853	119206910	(14590512)	+	(CCGCGCG)n	Simple_repeat	1	59	(0)	553462
24	33.2	2.6	1.7	chr10	133336651	133336764	(460658)	+	(CA)n	Simple_repeat	1	117	(0)	572401
13	3.7	10.7	0.0	chr10	133336882	133336909	(460513)	+	(GATGCG)n	Simple_repeat	1	31	(0)	572402
645	22.1	11.2	0.6	chr11	505269	505590	(134581032)	+	MLT1D	LTR/ERVL-MaLR	13	435	(70)	573467
1310	13.9	1.7	4.6	chr11	505629	505865	(134580757)	C	AluJb	SINE/Alu	(82)	230	1	573468
2076	6.6	0.8	0.0	chr11	505875	506130	(134580492)	C	AluSq2	SINE/Alu	(7)	306	49	573469
2534	5.0	0.0	0.0	chr11	805822	806118	(134280504)	+	AluSx4	SINE/Alu	4	300	(10)	573961
2213	11.1	1.6	0.0	chr11	808145	808441	(134278181)	+	AluSx1	SINE/Alu	1	302	(10)	573969
1600	13.7	11.2	0.4	chr11	808447	808716	(134277906)	+	AluJb	SINE/Alu	1	303	(9)	573970
22	13.2	10.3	1.3	chr11	925798	925865	(134160757)	+	(CGTG)n	Simple_repeat	1	75	(0)	574110
298	27.9	6.3	5.5	chr11	3841790	3841899	(131244723)	C	L2b	LINE/L2	(2)	3373	3263	577812
28305	2.3	0.1	0.1	chr11	4170253	4176276	(130910346)	C	L1PA3	LINE/L1	(10)	6145	125	578479
4744	17.3	1.6	2.3	chr11	4176279	4177058	(130909564)	C	L1MA4A	LINE/L1	(816)	6389	5622	578478
617	27.4	12.3	9.8	chr11	4932235	4932726	(130153896)	+	MLT1G1	LTR/ERVL-MaLR	1	562	(17)	579406
727	26.8	3.7	0.9	chr11	5597102	5597312	(129489310)	+	MIR	SINE/MIR	14	230	(32)	580208
219	34.5	8.4	0.0	chr11	6235510	6235596	(128851026)	C	L2c	LINE/L2	(197)	3190	3096	580993
1478	22.7	2.5	3.5	chr11	7986410	7986815	(127099807)	+	L2	LINE/L2	2366	2767	(652)	583337
617	11.3	0.4	0.4	chr11	7986876	7986981	(127099641)	C	FLAM_C	SINE/Alu	(196)	106	1	583340
1901	13.2	3.0	1.7	chr11	9315326	9315621	(125771001)	+	AluSx1	SINE/Alu	1	300	(12)	585460
347	29.8	13.9	1.0	chr11	10856705	10856904	(124229718)	C	MIRb	SINE/MIR	(21)	247	18	588253
42	0.0	0.0	0.0	chr11	10900298	10900333	(124186289)	+	(GT)n	Simple_repeat	1	36	(0)	588338
312	20.9	13.3	0.0	chr11	10934289	10934379	(124152243)	+	MamRep1879	DNA/hAT-Tip100?	13	117	(99)	588409
2191	25.5	7.6	2.1	chr11	13046585	13047290	(122039332)	+	MER72B	LTR/ERV1	6	753	(15)	591719
584	32.0	9.7	3.5	chr11	13047351	13047774	(122038848)	+	L2	LINE/L2	1576	2028	(1391)	591720
1673	26.4	3.5	2.7	chr11	13090247	13090757	(121995865)	+	LTR33	LTR/ERVL	1	515	(0)	591784
1141	26.4	9.2	6.0	chr11	13090758	13091417	(121995205)	+	HAL1ME	LINE/L1	904	1591	(874)	591783
24	14.7	0.0	0.0	chr11	14499566	14499610	(120587012)	+	(CCCCCA)n	Simple_repeat	1	45	(0)	594061
14	24.0	0.0	0.0	chr11	14891684	14891722	(120194900)	+	(GGAGCA)n	Simple_repeat	1	39	(0)	594637
12	20.8	6.8	0.0	chr11	14891919	14891962	(120194660)	+	(GGCCC)n	Simple_repeat	1	47	(0)	594638
2391	9.5	0.0	0.7	chr11	32583027	32583320	(102503302)	C	AluSz	SINE/Alu	(20)	292	1	621910
733	23.2	10.8	0.0	chr11	32583338	32583535	(102503087)	C	L1ME1	LINE/L1	(468)	5711	5490	621907
12	16.5	5.9	0.0	chr11	32892771	32892804	(102193818)	+	(GGCGG)n	Simple_repeat	1	36	(0)	622439
383	22.4	1.7	7.2	chr11	34427213	34427337	(100659285)	C	MamRep564	Unknown	(165)	192	75	625253
34	0.0	0.0	0.0	chr11	34427606	34427637	(100658985)	+	(T)n	Simple_repeat	1	32	(0)	625254
12	35.1	1.4	1.4	chr11	35663487	35663556	(99423066)	+	GA-rich	Low_complexity	1	71	(0)	627135
17383	10.4	2.3	1.9	chr11	36670958	36672349	(98414273)	+	HUERS-P3b-int	LTR/ERV1	5381	6783	(635)	628762
16	15.8	0.0	2.7	chr11	43623928	43623964	(91462658)	+	A-rich	Low_complexity	1	37	(0)	638755
13	13.5	6.1	0.0	chr11	45147283	45147315	(89939307)	+	(GACGCG)n	Simple_repeat	1	35	(0)	641575
261	31.6	4.9	1.3	chr11	57568015	57568171	(77518451)	C	MamRep1879	DNA/hAT-Tip100?	(49)	167	5	654006
20	9.1	5.3	2.5	chr11	57761887	57761924	(77324698)	+	GA-rich	Low_complexity	1	40	(0)	654424
681	0.0	0.0	0.0	chr11	59550629	59550701	(75535921)	C	tRNA-Val-GTA	tRNA	(3)	73	1	656945
565	2.7	0.0	14.9	chr11	59551294	59551380	(75535242)	+	tRNA-Arg-AGA	tRNA	1	74	(2)	656947
670	8.4	0.0	0.0	chr11	59551755	59551837	(75534785)	+	tRNA-Leu-TTA	tRNA	1	83	(3)	656948
632	2.7	0.0	0.0	chr11	59556429	59556501	(75530121)	+	tRNA-Lys-AAA	tRNA	1	73	(3)	656960
661	1.4	0.0	0.0	chr11	59557497	59557569	(75529053)	C	tRNA-Phe-TTY	tRNA	(3)	73	1	656962
20	13.3	2.3	2.3	chr11	59557606	59557622	(75529000)	+	(TAA)n	Simple_repeat	1	18	(0)	656963
2303	7.3	0.0	1.1	chr11	59557623	59557909	(75528713)	+	AluSq2	SINE/Alu	3	286	(27)	656964
656	1.4	0.0	0.0	chr11	59560335	59560407	(75526215)	C	tRNA-Lys-AAA	tRNA	(3)	73	1	656970
240	29.2	0.0	1.5	chr11	60906807	60906872	(74179750)	C	MER5A	DNA/hAT-Charlie	(3)	186	122	659082
395	22.0	13.6	1.2	chr11	61362732	61362892	(73723730)	+	MIRb	SINE/MIR	18	201	(67)	660003
353	28.2	4.0	9.6	chr11	61385525	61385681	(73700941)	C	ERVL-E-int	LTR/ERVL	(302)	5365	5218	660065
860	20.2	4.9	2.5	chr11	61385682	61385879	(73700743)	C	LTR41B	LTR/ERVL	(555)	203	1	660063
343	33.1	1.9	5.3	chr11	61919770	61919938	(73166684)	+	MIR3	SINE/MIR	2	164	(44)	661073
24	13.4	4.1	0.0	chr11	61967443	61967491	(73119131)	+	(GGC)n	Simple_repeat	1	51	(0)	661187
17	33.2	0.0	0.0	chr11	61971668	61971723	(73114899)	+	(GT)n	Simple_repeat	1	56	(0)	661193
180	26.7	9.6	1.3	chr11	62544883	62544958	(72541664)	C	L2b	LINE/L2	(2)	3373	3291	662281
215	28.2	9.3	1.3	chr11	62545001	62545079	(72541543)	C	L2c	LINE/L2	(12)	3375	3290	662282
18	8.7	7.4	5.2	chr11	62653254	62653307	(72433315)	+	(GAGCGC)n	Simple_repeat	1	58	(0)	662481
244	22.6	0.0	0.0	chr11	62805977	62806029	(72280593)	+	L2a	LINE/L2	3374	3426	(0)	662835
1657	2.7	0.0	0.0	chr11	62841624	62841809	(72244813)	C	U2	snRNA	(2)	186	1	662922
285	34.3	9.0	1.7	chr11	62842221	62842395	(72244227)	+	MIRb	SINE/MIR	3	191	(77)	662923
1741	5.6	0.0	2.3	chr11	62860220	62860433	(72226189)	+	AluY	SINE/Alu	1	209	(102)	662972
6452	12.4	1.3	4.2	chr11	62860434	62861082	(72225540)	C	LTR5B	LTR/ERVK	(376)	626	1	662971
3739	11.7	11.3	0.0	chr11	63491582	63492180	(71594442)	C	MER61F	LTR/ERV1	(0)	676	2	663751
20	8.0	0.0	0.0	chr11	64166792	64166818	(70919804)	+	(T)n	Simple_repeat	1	27	(0)	665098
2357	8.6	0.0	0.3	chr11	64166830	64167130	(70919492)	+	AluSg	SINE/Alu	1	300	(10)	665099
802	15.6	1.6	0.0	chr11	64170572	64170693	(70915929)	C	AluJb	SINE/Alu	(69)	243	120	665111
305	24.4	8.5	0.0	chr11	64268468	64268553	(70818069)	C	MIRb	SINE/MIR	(90)	178	85	665280
210	25.6	3.2	10.0	chr11	64269299	64269398	(70817224)	+	L2a	LINE/L2	3290	3421	(5)	665281
1989	15.5	0.3	0.7	chr11	64334688	64334983	(70751639)	C	AluJb	SINE/Alu	(17)	295	1	665417
650	20.0	0.9	0.0	chr11	64872103	64872212	(70214410)	+	AluJr	SINE/Alu	118	228	(84)	666368
15	14.7	0.0	0.0	chr11	65041184	65041213	(70045409)	+	(GCCCC)n	Simple_repeat	1	30	(0)	666738
237	34.1	6.6	13.1	chr11	65169215	65169451	(69917171)	+	MIR	SINE/MIR	21	255	(13)	666997
13	28.8	0.0	5.7	chr11	65315385	65315454	(69771168)	+	(CGGAGC)n	Simple_repeat	1	70	(0)	667294
13	14.3	2.2	8.5	chr11	65423133	65423178	(69663444)	+	GA-rich	Low_complexity	1	47	(0)	667512
14	8.8	0.0	0.0	chr11	65425196	65425219	(69661403)	+	(CAAA)n	Simple_repeat	1	24	(0)	667513
13	8.5	4.0	0.0	chr11	65500555	65500579	(69586043)	+	(GAAG)n	Simple_repeat	1	26	(0)	667664
1937	13.4	1.3	1.0	chr11	65506779	65507076	(69579546)	C	AluSx3	SINE/Alu	(12)	299	1	667666
231	20.4	8.5	6.1	chr11	65909021	65909135	(69177487)	C	L1ME3G	LINE/L1	(240)	684	567	668410
1069	18.5	0.0	0.6	chr11	65909145	65909317	(69177305)	+	AluJo	SINE/Alu	129	300	(12)	668411
902	22.4	31.6	0.3	chr11	65909331	65909632	(69176990)	C	L1ME2	LINE/L1	(11)	6153	5756	668412
14	21.8	0.0	8.1	chr11	66277970	66278031	(68808591)	+	G-rich	Low_complexity	1	62	(0)	669165
14	21.2	0.0	7.1	chr11	66278127	66278182	(68808440)	+	(CCCCG)n	Simple_repeat	1	56	(0)	669166
304	24.3	0.0	0.9	chr11	67629552	67629665	(67456957)	C	MIRc	SINE/MIR	(71)	191	86	671999
2287	10.4	2.0	0.0	chr11	68299584	68299882	(66786740)	C	AluSq	SINE/Alu	(8)	305	1	673166
232	38.5	6.2	2.2	chr11	69444370	69444507	(65642115)	+	MIRb	SINE/MIR	116	259	(3)	675104
2424	6.6	1.0	0.0	chr11	69675646	69675947	(65410675)	+	AluSx1	SINE/Alu	6	310	(2)	675472
439	28.1	8.6	3.9	chr11	72776551	72776728	(62309894)	+	MIRb	SINE/MIR	15	201	(7)	680568
188	31.3	3.5	0.0	chr11	72776759	72776841	(62309781)	C	L2a	LINE/L2	(508)	2911	2826	680554
1949	23.2	9.3	7.2	chr11	74805970	74806941	(60279681)	+	L1ME3A	LINE/L1	5183	6165	(8)	684854
281	28.0	1.0	4.8	chr11	74948648	74948752	(60137870)	+	MIRb	SINE/MIR	162	262	(6)	685058
195	25.0	0.0	0.0	chr11	75096465	75096508	(59990114)	+	MIRc	SINE/MIR	36	79	(189)	685323
350	31.5	5.9	2.0	chr11	75474987	75475132	(59611490)	+	MIR	SINE/MIR	111	262	(0)	686126
675	1.3	0.0	0.0	chr11	76235513	76235587	(58851035)	+	tRNA-Pro-CCY	tRNA	1	75	(0)	687581
614	2.7	0.0	0.0	chr11	76235824	76235896	(58850726)	C	tRNA-Pro-CCA	tRNA	(2)	73	1	687582
415	25.9	12.1	1.5	chr11	76799631	76799763	(58286859)	+	MIRb	SINE/MIR	21	169	(99)	688699
2149	20.0	6.5	3.4	chr11	76885455	76885910	(58200712)	C	MER74A	LTR/ERVL	(73)	485	6	688871
823	28.8	10.0	2.0	chr11	76885916	76886422	(58200200)	C	L2a	LINE/L2	(46)	3380	2827	688873
744	19.7	5.5	4.2	chr11	77046854	77047070	(58039552)	C	MER20B	DNA/hAT-Charlie	(11)	772	553	689156
236	24.3	2.8	6.7	chr11	77047065	77047139	(58039483)	C	MER20B	DNA/hAT-Charlie	(710)	73	2	689156
301	22.5	0.9	4.3	chr11	77047188	77047260	(58039362)	+	L1M4	LINE/L1	4250	4322	(1824)	689155
1650	13.2	4.2	0.0	chr11	77047261	77047510	(58039112)	+	AluJb	SINE/Alu	44	304	(8)	689157
308	30.8	11.9	1.9	chr11	77994212	77994370	(57092252)	+	MIRc	SINE/MIR	67	243	(25)	691058
242	19.6	0.0	5.6	chr11	78140181	78140234	(56946388)	C	MER5A1	DNA/hAT-Charlie	(26)	140	90	691442
193	17.0	13.1	0.0	chr11	78140303	78140355	(56946267)	+	MIRc	SINE/MIR	85	145	(123)	691443
356	31.3	3.2	16.3	chr11	83191937	83191980	(51894642)	+	MIRb	SINE/MIR	51	87	(181)	700218
3994	6.1	0.4	0.4	chr11	83191981	83192491	(51894131)	+	HERV1_LTRb	LTR/ERV1	1	511	(0)	700219
283	34.2	9.1	4.4	chr11	86148126	86148354	(48938268)	C	L2b	LINE/L2	(5)	3370	3130	705024
1319	26.8	8.1	3.7	chr11	86180750	86181122	(48905500)	C	L2a	LINE/L2	(1)	3425	3039	705094
1625	20.9	8.8	2.3	chr11	86181123	86181558	(48905064)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	705095
219	37.2	11.0	0.8	chr11	86243978	86244107	(48842515)	C	MamRTE1	LINE/RTE-BovB	(1288)	2524	2380	705222
16	13.2	0.0	0.0	chr11	86245010	86245034	(48841588)	+	(CG)n	Simple_repeat	1	25	(0)	705223
15	26.8	3.3	1.6	chr11	86245077	86245136	(48841486)	+	(CGG)n	Simple_repeat	1	62	(0)	705224
18	7.6	0.0	0.0	chr11	94543836	94543863	(40542759)	+	(CTCC)n	Simple_repeat	1	28	(0)	717311
12	27.7	0.0	0.0	chr11	95789478	95789516	(39297106)	+	(TCC)n	Simple_repeat	1	39	(0)	719160
339	23.5	24.3	1.2	chr11	111872075	111872238	(23214384)	C	MIRb	SINE/MIR	(41)	227	14	742109
2735	14.7	9.7	0.2	chr11	113665122	113665578	(21421044)	+	LTR10B	LTR/ERV1	1	505	(0)	744952
2245	9.0	0.0	0.0	chr11	114148513	114148789	(20937833)	C	AluSc8	SINE/Alu	(31)	280	4	745806
44	0.0	0.0	0.0	chr11	114148864	114148901	(20937721)	+	(GT)n	Simple_repeat	1	38	(0)	745807
190	25.3	7.4	8.5	chr11	114148983	114149064	(20937558)	C	L2c	LINE/L2	(2)	3385	3305	745808
243	22.7	9.8	8.3	chr11	117145035	117145154	(17941468)	C	MIR3	SINE/MIR	(12)	196	75	750610
2232	11.3	0.0	0.0	chr11	118007401	118007693	(17078929)	C	AluSc	SINE/Alu	(16)	293	1	752138
2170	11.4	1.6	0.0	chr11	118007871	118008169	(17078453)	C	AluSz	SINE/Alu	(8)	304	1	752139
2209	10.9	0.0	1.3	chr11	119066969	119067272	(16019350)	C	AluJb	SINE/Alu	(12)	300	1	754197
207	27.2	10.4	8.8	chr11	119067273	119067385	(16019237)	C	L2c	LINE/L2	(3)	3384	3270	754198
235	29.7	0.0	0.0	chr11	119067414	119067477	(16019145)	C	MIRc	SINE/MIR	(34)	234	171	754199
2230	20.2	5.2	5.5	chr11	119218429	119218935	(15867687)	+	Tigger7	DNA/TcMar-Tigger	1	505	(1986)	754474
6271	9.9	1.8	1.3	chr11	125552167	125553314	(9533308)	C	HUERS-P3b-int	LTR/ERV1	(4776)	2642	1769	764722
10111	14.6	2.1	4.4	chr11	125553312	125554733	(9531889)	C	HUERS-P3b-int	LTR/ERV1	(7267)	1652	254	764722
4129	23.6	8.9	4.3	chr11	130077946	130079078	(5007544)	C	L1ME3B	LINE/L1	(40)	6133	4511	771334
14	19.8	0.0	2.7	chr12	2794670	2794706	(130480603)	+	G-rich	Low_complexity	1	37	(0)	782668
17	0.0	0.0	0.0	chr12	4605186	4605206	(128670103)	+	(TTG)n	Simple_repeat	1	21	(0)	785779
2130	7.6	4.0	0.0	chr12	6568652	6568942	(126706367)	+	AluSq	SINE/Alu	1	303	(10)	788954
1822	13.7	8.9	4.4	chr12	6944852	6945194	(126330115)	C	Tigger4b	DNA/TcMar-Tigger	(1)	360	1	789679
18	0.0	4.0	0.0	chr12	19130684	19130708	(114144601)	+	(AGG)n	Simple_repeat	1	26	(0)	807588
14	20.5	2.6	0.0	chr12	22625288	22625326	(110649983)	+	(CCGC)n	Simple_repeat	1	40	(0)	812441
19	26.9	0.0	3.0	chr12	22625357	22625422	(110649887)	+	(GTC)n	Simple_repeat	1	66	(0)	812442
2083	15.5	0.0	0.0	chr12	24759369	24759678	(108515631)	+	AluSz	SINE/Alu	1	310	(2)	815368
1860	10.3	4.0	2.4	chr12	31727733	31728023	(101547286)	C	AluSz	SINE/Alu	(14)	298	3	825908
748	11.2	0.0	0.0	chr12	31728025	31728122	(101547187)	C	AluJo	SINE/Alu	(176)	136	39	825909
894	23.4	3.1	2.4	chr12	31728301	31728554	(101546755)	C	MIR	SINE/MIR	(0)	262	7	825910
328	29.6	0.0	5.3	chr12	31729530	31729661	(101545648)	C	MIRb	SINE/MIR	(16)	252	128	825912
2657	17.6	4.7	11.4	chr12	32020260	32020583	(101254726)	C	MER67C	LTR/ERV1	(0)	711	384	826605
4308	12.8	0.3	0.5	chr12	32020584	32020698	(101254611)	C	MER41B	LTR/ERV1	(1)	633	518	826606
1995	14.7	0.3	1.9	chr12	32020699	32021012	(101254297)	+	AluSg	SINE/Alu	1	309	(1)	826607
4308	12.8	0.3	0.5	chr12	32021013	32021530	(101253779)	C	MER41B	LTR/ERV1	(117)	517	2	826606
1413	24.2	9.2	0.7	chr12	32273288	32273703	(101001606)	C	LTR108e_Mam	LTR/ERVL	(0)	548	94	827177
2850	12.4	1.0	0.0	chr12	32273706	32274109	(101001200)	C	MER61B	LTR/ERV1	(0)	427	20	827178
13	18.9	0.0	0.0	chr12	42589114	42589143	(90686166)	+	(CCTCG)n	Simple_repeat	1	30	(0)	836900
36	6.7	0.0	0.0	chr12	42589509	42589555	(90685754)	+	(GCTGCGGG)n	Simple_repeat	1	47	(0)	836901
16445	10.2	1.6	0.7	chr12	43702666	43705267	(89570042)	+	HUERS-P3b-int	LTR/ERV1	4713	7411	(7)	838408
2429	7.6	0.7	0.3	chr12	43759589	43759890	(89515419)	+	AluSx1	SINE/Alu	3	305	(7)	838505
21	0.0	0.0	0.0	chr12	46256614	46256636	(87018673)	+	(CA)n	Simple_repeat	1	23	(0)	842030
29	0.0	0.0	0.0	chr12	46256637	46256661	(87018648)	+	(AG)n	Simple_repeat	1	25	(0)	842031
5016	12.8	14.7	1.6	chr12	46256662	46257596	(87017713)	C	MER41-int	LTR/ERV1	(4867)	1079	1	842028
2535	7.9	0.0	0.0	chr12	47215257	47215548	(86059761)	C	AluSq2	SINE/Alu	(16)	297	6	843295
2384	10.7	0.7	0.0	chr12	47215773	47216080	(86059229)	+	AluSq	SINE/Alu	1	310	(3)	843296
2576	5.6	0.0	0.7	chr12	47222140	47222444	(86052865)	+	AluSp	SINE/Alu	3	305	(8)	843311
241	20.8	6.5	7.7	chr12	47222535	47222580	(86052729)	C	L2	LINE/L2	(1025)	2394	2346	843312
453	29.2	6.5	2.8	chr12	47222581	47222830	(86052479)	C	MIR	SINE/MIR	(1)	261	2	843313
665	14.7	32.0	0.9	chr12	48351465	48351683	(84923626)	+	MER33	DNA/hAT-Charlie	5	323	(1)	845098
2403	5.2	1.0	2.6	chr12	48717145	48717452	(84557857)	+	AluSx3	SINE/Alu	1	303	(8)	845624
16	0.0	10.7	0.0	chr12	49091854	49091881	(84183428)	+	(CTTC)n	Simple_repeat	1	31	(0)	846377
834	17.2	16.3	0.0	chr12	49127221	49127389	(84147920)	C	AluJb	SINE/Alu	(45)	267	66	846443
20	18.8	0.0	3.9	chr12	50505002	50505053	(82770256)	+	(GGC)n	Simple_repeat	1	52	(0)	849382
859	21.7	7.8	2.8	chr12	51049693	51049910	(82225399)	+	MIR	SINE/MIR	30	259	(3)	850497
2829	3.2	0.0	0.0	chr12	51173588	51173900	(82101409)	+	AluSp	SINE/Alu	1	313	(0)	850767
300	29.2	14.4	4.3	chr12	52903183	52903368	(80371941)	C	MIRb	SINE/MIR	(32)	236	29	853626
17	0.0	0.0	0.0	chr12	53143302	53143320	(80131989)	+	(A)n	Simple_repeat	1	19	(0)	854138
2010	20.0	9.1	3.5	chr12	53143329	53143879	(80131430)	+	MER4CL34	LTR/ERV1	197	765	(0)	854135
28	25.1	0.0	1.3	chr12	53938973	53939049	(79336260)	+	(GCG)n	Simple_repeat	1	77	(0)	855693
15	13.5	3.0	0.0	chr12	54082149	54082181	(79193128)	+	A-rich	Low_complexity	1	34	(0)	855837
2483	4.6	0.0	0.3	chr12	54326155	54326439	(78948870)	C	AluY	SINE/Alu	(27)	284	1	856269
47	0.0	0.0	0.0	chr12	54326641	54326680	(78948629)	+	(GT)n	Simple_repeat	1	40	(0)	856270
27267	3.0	0.3	0.0	chr12	55161586	55167616	(78107693)	C	L1PA3	LINE/L1	(0)	6155	124	857444
205	13.6	6.4	4.3	chr12	55739305	55739350	(77535959)	C	MIR	SINE/MIR	(72)	190	144	858153
1126	12.9	2.3	0.0	chr12	55996484	55996654	(77278655)	C	AluJr	SINE/Alu	(18)	294	120	858689
19	27.9	2.5	2.4	chr12	56080060	56080082	(77195227)	+	(CTCC)n	Simple_repeat	1	32	(50)	858883
18	8.7	0.0	0.0	chr12	56080083	56080107	(77195202)	+	(CT)n	Simple_repeat	1	25	(0)	858884
19	27.9	2.5	2.4	chr12	56080108	56080141	(77195168)	+	(CTCC)n	Simple_repeat	33	82	(0)	858883
20	24.6	6.0	1.1	chr12	56104552	56104639	(77170670)	+	(CTCG)n	Simple_repeat	1	92	(0)	858918
606	5.6	0.0	0.0	chr12	56190369	56190439	(77084870)	+	tRNA-Ser-TCG	tRNA	6	76	(9)	859050
2265	10.3	0.7	0.0	chr12	56190451	56190742	(77084567)	C	AluSx	SINE/Alu	(0)	312	19	859051
12	16.3	2.8	2.7	chr12	56224440	56224475	(77050834)	+	G-rich	Low_complexity	1	37	(0)	859122
2442	7.1	0.0	0.0	chr12	56467870	56468163	(76807146)	C	AluSc5	SINE/Alu	(15)	294	1	859602
391	29.1	12.8	4.5	chr12	56468164	56468352	(76806957)	C	MIRb	SINE/MIR	(58)	204	1	859601
3839	6.4	0.2	0.2	chr12	56965492	56965991	(76309318)	+	L1P2	LINE/L1	4548	5047	(1099)	860503
8824	6.8	0.1	0.0	chr12	56965992	56967070	(76308239)	+	L1PA5	LINE/L1	175	1254	(5074)	860507
14	20.1	0.0	0.0	chr12	57846974	57847007	(75428302)	+	(GGCG)n	Simple_repeat	1	34	(0)	861917
3976	17.5	7.9	1.4	chr12	62269771	62270798	(71004511)	C	L1MB8	LINE/L1	(376)	5802	4678	867699
412	23.8	3.9	4.7	chr12	62308176	62308303	(70967006)	+	MLT1F-int	LTR/ERVL-MaLR	1363	1489	(0)	867746
707	30.1	4.8	7.6	chr12	62308304	62308605	(70966704)	+	MLT1F	LTR/ERVL-MaLR	1	293	(255)	867746
3771	22.7	12.0	2.7	chr12	62308625	62310163	(70965146)	+	L1MEg	LINE/L1	2606	4353	(1793)	867745
366	23.8	3.7	3.7	chr12	64609274	64609382	(68665927)	+	MIRc	SINE/MIR	102	210	(58)	871473
250	26.0	0.0	2.7	chr12	64626176	64626250	(68649059)	+	MIR	SINE/MIR	187	259	(3)	871501
15	9.1	0.0	0.0	chr12	71663470	71663493	(61611816)	+	(GCT)n	Simple_repeat	1	24	(0)	882637
3284	16.9	4.2	5.1	chr12	80087534	80088225	(53187084)	C	L1MB7	LINE/L1	(68)	6116	5431	894532
1202	34.4	9.8	3.2	chr12	80088226	80089093	(53186216)	+	L2c	LINE/L2	1928	2858	(561)	894533
2628	5.5	0.0	0.3	chr12	92150843	92151153	(41124156)	+	AluY	SINE/Alu	2	311	(0)	911021
16	8.2	0.0	0.0	chr12	93591426	93591451	(39683858)	+	(TGTC)n	Simple_repeat	1	26	(0)	913772
180	22.0	3.8	5.7	chr12	95003876	95003928	(38271381)	+	Penelope1_Vert	LINE/Penelope	880	931	(156)	916302
1371	10.1	0.0	7.3	chr12	95004028	95004245	(38271064)	+	AluJr	SINE/Alu	5	206	(106)	916303
347	26.4	6.0	3.9	chr12	95877594	95877723	(37397586)	C	L2c	LINE/L2	(2)	3385	3253	918057
645	1.3	0.0	0.0	chr12	96036021	96036095	(37239214)	+	tRNA-Asp-GAY	tRNA	1	75	(0)	918300
2182	8.1	0.3	9.6	chr12	98502720	98503041	(34772268)	+	AluSz	SINE/Alu	1	292	(20)	922373
645	2.8	0.0	0.0	chr12	98504252	98504323	(34770986)	+	tRNA-Trp-TGG	tRNA	1	72	(3)	922375
2259	7.6	0.0	0.4	chr12	98643813	98644075	(34631234)	C	AluSx1	SINE/Alu	(9)	303	42	922686
283	26.0	5.7	4.8	chr12	103965380	103965484	(29309825)	C	MIR1_Amn	SINE/MIR	(37)	193	88	931616
42	20.4	2.2	5.0	chr12	104138230	104138383	(29136926)	+	(GCCCC)n	Simple_repeat	1	149	(0)	931921
189	16.1	0.0	0.0	chr12	104456707	104456737	(28818572)	C	MER131	DNA?	(150)	65	35	932617
1623	18.7	2.8	1.7	chr12	104978079	104978366	(28296943)	C	MLT1A0	LTR/ERVL-MaLR	(54)	311	21	933618
2184	13.7	3.6	3.0	chr12	106984536	106984897	(26290412)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	937201
744	14.1	2.4	4.7	chr12	106984898	106984921	(26290388)	C	AluJb	SINE/Alu	(293)	19	1	937200
226	30.6	4.0	0.8	chr12	106984923	106985044	(26290265)	+	L2-3_Crp	LINE/L2	845	970	(1126)	937202
1027	9.7	0.0	4.6	chr12	108117181	108117353	(25157956)	C	L1MA9	LINE/L1	(0)	6312	6148	939499
2470	17.1	2.4	1.0	chr12	108117354	108117836	(25157473)	C	LTR45B	LTR/ERV1	(0)	603	3	939500
3751	13.7	4.8	0.0	chr12	109653498	109654072	(23621237)	C	LTR26D	LTR/ERV1	(0)	604	1	942977
449	28.7	2.7	5.3	chr12	111268977	111269127	(22006182)	+	MIRb	SINE/MIR	45	191	(77)	946669
287	32.6	6.6	0.0	chr12	111269153	111269293	(22006016)	+	L2c	LINE/L2	3229	3379	(8)	946670
581	19.1	0.0	0.9	chr12	111369420	111369524	(21905785)	+	AluJo	SINE/Alu	44	147	(165)	946922
267	20.0	5.0	0.0	chr12	111686339	111686414	(21588895)	C	MIR1_Amn	SINE/MIR	(80)	150	62	947658
2219	9.4	1.3	0.3	chr12	111686437	111686733	(21588576)	+	AluSq	SINE/Alu	1	300	(13)	947659
1475	16.7	10.8	0.4	chr12	112418286	112418543	(20856766)	C	AluJb	SINE/Alu	(24)	288	1	949168
373	23.0	2.9	9.9	chr12	112418544	112418648	(20856661)	C	MIR	SINE/MIR	(110)	152	56	949169
14	25.4	3.0	4.4	chr12	112418853	112418936	(20856373)	+	(GGC)n	Simple_repeat	1	82	(0)	949170
340	34.4	4.0	6.0	chr12	116558867	116559197	(16716112)	C	Helitron2Na_Mam	RC?/Helitron?	(0)	324	1	958373
232	34.2	18.8	1.0	chr12	120200478	120200669	(13074640)	+	MIRb	SINE/MIR	27	260	(8)	966429
1323	1.4	0.0	0.0	chr12	120291760	120291903	(12983406)	C	U4	snRNA	(1)	144	1	966631
23	11.1	6.1	0.0	chr12	120534216	120534264	(12741045)	+	A-rich	Low_complexity	1	52	(0)	967327
14	25.2	3.5	1.7	chr12	121803593	121803650	(11471659)	+	(CCCCCGG)n	Simple_repeat	1	60	(0)	970352
296	21.2	3.0	1.5	chr12	123272293	123272359	(10002950)	C	Charlie4z	DNA/hAT-Charlie	(1)	166	99	973658
380	21.1	5.9	3.1	chr12	123272426	123272523	(10002786)	C	L2a	LINE/L2	(16)	3410	3310	973659
836	16.9	9.1	0.0	chr12	124887356	124887515	(8387794)	C	Tigger7	DNA/TcMar-Tigger	(5)	2486	2311	977063
1864	12.6	9.3	0.7	chr12	124887516	124887800	(8387509)	+	AluSz6	SINE/Alu	1	312	(0)	977064
1215	16.6	4.7	0.5	chr12	124911273	124911477	(8363832)	C	AluSx1	SINE/Alu	(21)	291	78	977136
615	5.6	0.0	0.0	chr12	124921755	124921826	(8353483)	C	tRNA-Ala-GCG	tRNA	(3)	72	1	977152
2521	17.5	7.0	5.0	chr12	124921921	124922521	(8352788)	C	L1MA5	LINE/L1	(0)	6300	5687	977153
659	0.0	0.0	0.0	chr12	124927345	124927416	(8347893)	C	tRNA-Asp-GAY	tRNA	(3)	72	1	977165
679	1.4	0.0	0.0	chr12	124927842	124927915	(8347394)	C	tRNA-Phe-TTY	tRNA	(2)	74	1	977166
659	0.0	0.0	0.0	chr12	124939647	124939718	(8335591)	C	tRNA-Asp-GAY	tRNA	(3)	72	1	977200
587	8.3	0.0	0.0	chr12	124939966	124940037	(8335272)	+	tRNA-Ala-GCG	tRNA	1	72	(3)	977201
2480	9.4	0.0	0.3	chr12	130854973	130855281	(2420028)	C	AluSx1	SINE/Alu	(3)	309	2	987336
2094	14.8	1.0	0.3	chr12	130855289	130855598	(2419711)	C	AluJo	SINE/Alu	(0)	312	1	987337
1674	26.5	10.9	6.6	chr12	130855599	130855763	(2419546)	C	LTR8B	LTR/ERV1	(381)	439	283	987335
1264	23.2	5.3	16.7	chr12	131217158	131217695	(2057614)	+	MER65D	LTR/ERV1	1	473	(0)	987867
13	17.7	10.2	1.5	chr12	131894611	131894669	(1380640)	+	(GCCGCGGC)n	Simple_repeat	1	65	(0)	988783
24	12.7	0.0	0.0	chr12	131894687	131894748	(1380561)	+	(AGTCGG)n	Simple_repeat	1	62	(0)	988784
1513	13.8	11.2	2.3	chr12	131950767	131950889	(1324420)	C	AluJb	SINE/Alu	(25)	287	134	988882
27	22.9	0.0	6.2	chr12	132559920	132560016	(715293)	+	(CCCGCCC)n	Simple_repeat	1	97	(0)	989594
13	28.4	3.3	1.6	chr12	132687508	132687568	(587741)	+	(GGCGC)n	Simple_repeat	1	63	(0)	989772
14	22.0	2.4	0.0	chr12	132687578	132687619	(587690)	+	(GCGCTCC)n	Simple_repeat	1	43	(0)	989773
439	18.3	1.9	0.9	chr12	132762410	132762514	(512795)	+	AluJb	SINE/Alu	2	107	(205)	989910
291	7.7	0.0	0.0	chr12	132762515	132762553	(512756)	C	MADE1	DNA/TcMar-Mariner	(41)	39	1	989911
19	11.0	2.4	2.4	chr13	19863432	19863472	(94500856)	+	(CTCCGC)n	Simple_repeat	1	42	(0)	993246
15	0.0	9.1	0.0	chr13	28533188	28533209	(85831119)	+	(AC)n	Simple_repeat	1	24	(0)	1006904
373	32.1	10.7	1.4	chr13	30308060	30308280	(84056048)	+	MIR	SINE/MIR	16	259	(3)	1009432
267	13.3	9.4	0.0	chr13	45473646	45473702	(68890626)	C	MIRb	SINE/MIR	(3)	259	197	1032373
1069	26.6	10.6	0.8	chr13	45473783	45474130	(68890198)	C	LTR86A1	LTR/ERVL	(130)	383	1	1032374
188	30.9	15.8	3.2	chr13	46552497	46552683	(67811645)	+	MIR	SINE/MIR	30	244	(18)	1034097
13183	7.0	0.1	0.6	chr13	60266268	60268006	(54096322)	C	HERV30-int	LTR/ERV1	(6526)	1731	1	1053261
4867	9.7	1.8	0.7	chr13	60268007	60268720	(54095608)	C	LTR30	LTR/ERV1	(0)	722	1	1053261
2104	24.7	10.8	3.4	chr13	92637244	92638189	(21726139)	+	L1MEc	LINE/L1	302	1326	(5074)	1095845
14	12.8	2.6	5.0	chr13	94662631	94662669	(19701659)	+	A-rich	Low_complexity	1	40	(0)	1098687
625	24.4	0.0	0.8	chr13	98480763	98480889	(15883439)	C	AluJo	SINE/Alu	(186)	126	1	1104708
29	33.2	0.0	3.6	chr14	20461318	20461457	(86582261)	+	(GCCGCC)n	Simple_repeat	1	140	(0)	1128082
22	19.0	0.0	0.0	chr14	20469448	20469495	(86574223)	+	(AGCGG)n	Simple_repeat	1	48	(0)	1128100
657	1.4	0.0	0.0	chr14	20613399	20613472	(86430246)	C	tRNA-Pro-CCY	tRNA	(1)	74	1	1128342
740	0.0	0.0	0.0	chr14	20625370	20625451	(86418267)	+	tRNA-Leu-CTA_	tRNA	1	82	(3)	1128366
635	1.4	0.0	0.0	chr14	20633006	20633078	(86410640)	+	tRNA-Pro-CCA	tRNA	1	73	(2)	1128377
11	10.0	5.7	2.7	chr14	20633079	20633108	(86410610)	+	(TTCTCT)n	Simple_repeat	5	35	(0)	1128378
535	1.4	0.0	22.3	chr14	20657464	20657557	(86386161)	C	tRNA-Tyr-TAC	tRNA	(3)	73	1	1128419
638	2.7	0.0	0.0	chr14	20681690	20681762	(86361956)	+	tRNA-Thr-ACA	tRNA	1	73	(3)	1128457
563	0.0	0.0	18.0	chr14	20683273	20683361	(86360357)	+	tRNA-Tyr-TAC	tRNA	1	73	(3)	1128459
182	24.5	2.0	0.0	chr14	22872886	22872934	(84170784)	C	MIRc	SINE/MIR	(102)	166	117	1131880
663	1.4	0.0	0.0	chr14	22929701	22929773	(84113945)	+	tRNA-Arg-CGY_	tRNA	1	73	(3)	1131978
190	36.1	10.0	2.1	chr14	39168543	39168828	(67874890)	+	L2	LINE/L2	2417	2727	(692)	1155279
1737	18.1	14.2	8.2	chr14	50650438	50650739	(56392979)	+	MLT1F	LTR/ERVL-MaLR	1	342	(206)	1170295
2191	13.3	0.3	0.3	chr14	50650740	50651047	(56392671)	+	AluSx	SINE/Alu	1	308	(4)	1170296
1737	18.1	14.2	8.2	chr14	50651048	50651256	(56392462)	+	MLT1F	LTR/ERVL-MaLR	343	548	(0)	1170295
14	24.7	0.0	0.0	chr14	52791516	52791554	(54252164)	+	(CACCGC)n	Simple_repeat	1	39	(0)	1173517
25	21.0	5.5	3.1	chr14	60724092	60724182	(46319536)	+	(CCTC)n	Simple_repeat	1	96	(0)	1185459
1946	18.3	0.6	0.6	chr14	65301902	65302341	(41741377)	+	MER89	LTR/ERV1	2	539	(20)	1192867
1133	12.0	17.9	7.1	chr14	67675227	67675493	(39368225)	+	AluJo	SINE/Alu	1	302	(10)	1196534
438	24.9	21.5	1.0	chr14	67820209	67820407	(39223311)	+	MIR	SINE/MIR	12	262	(0)	1196779
1316	15.4	6.6	6.3	chr14	69696705	69696798	(37346920)	+	MER33	DNA/hAT-Charlie	1	87	(237)	1200033
4303	9.9	1.1	3.1	chr14	69696799	69697441	(37346277)	C	MER41B	LTR/ERV1	(0)	634	5	1200034
1664	17.8	10.1	4.6	chr14	70223544	70223937	(36819781)	C	MER61B	LTR/ERV1	(9)	418	1	1200884
16	24.8	0.0	3.6	chr14	71321008	71321016	(35722702)	+	(GCCGCTC)n	Simple_repeat	1	51	(0)	1202621
16	7.6	11.9	0.0	chr14	71321017	71321058	(35722660)	+	(CGCTCGG)n	Simple_repeat	1	47	(0)	1202622
17319	9.5	4.6	3.1	chr14	100000818	100003408	(7040310)	C	MER4-int	LTR/ERV1	(0)	8270	3972	1250997
2462	5.8	1.4	0.7	chr14	102305424	102305718	(4738000)	C	AluSx1	SINE/Alu	(15)	297	1	1254616
243	31.1	12.4	0.0	chr14	102305731	102305836	(4737882)	C	L2a	LINE/L2	(5)	3421	3301	1254617
247	24.2	9.8	4.8	chr14	102525126	102525251	(4518467)	C	MER113B	DNA/hAT-Charlie	(116)	186	54	1255088
1582	19.7	1.4	1.2	chr14	102525254	102525597	(4518121)	+	L1MB3	LINE/L1	5698	6042	(141)	1255089
21	5.0	7.0	2.2	chr14	105415231	105415273	(1628445)	+	(CGCGGGG)n	Simple_repeat	1	46	(0)	1259656
11	24.8	0.0	0.0	chr14	105474566	105474599	(1569119)	+	G-rich	Low_complexity	1	34	(0)	1259730
2546	6.8	0.0	0.0	chr15	22785786	22786095	(79205094)	C	AluY	SINE/Alu	(0)	311	2	1266287
268	21.5	6.7	18.1	chr15	28975772	28975902	(73015287)	+	L1MC5a	LINE/L1	5414	5512	(2370)	1274822
231	21.4	4.5	3.5	chr15	28976045	28976131	(73015058)	C	L1M5	LINE/L1	(1649)	4497	4410	1274823
1735	14.6	4.8	0.7	chr15	30859307	30859603	(71131586)	+	LTR47A2	LTR/ERVL	112	421	(11)	1277766
4076	21.4	3.2	7.7	chr15	30859604	30860654	(71130535)	+	HERVL74-int	LTR/ERVL	3875	4876	(809)	1277761
1456	15.6	0.0	0.0	chr15	34640719	34640929	(67350260)	C	AluJr4	SINE/Alu	(78)	234	24	1283141
648	24.2	8.0	6.8	chr15	34640937	34641189	(67350000)	C	LTR37A	LTR/ERV1	(1)	425	166	1283142
415	33.1	1.9	1.3	chr15	35167241	35167396	(66823793)	C	MIRc	SINE/MIR	(3)	265	109	1284043
12	20.8	0.0	2.9	chr15	38252257	38252291	(63738898)	+	(GGC)n	Simple_repeat	1	35	(0)	1288014
729	1.2	0.0	0.0	chr15	40593825	40593906	(61397283)	C	tRNA-Ser-AGY	tRNA	(3)	82	1	1291509
365	9.9	0.0	12.7	chr15	41117085	41117155	(60874034)	C	AluJr	SINE/Alu	(201)	111	50	1292537
365	16.2	0.0	10.0	chr15	41117156	41117235	(60873954)	+	AluJr4	SINE/Alu	54	125	(187)	1292538
422	29.3	5.0	11.0	chr15	42495112	42495456	(59495733)	+	L2b	LINE/L2	3048	3370	(5)	1295221
314	29.2	14.3	6.4	chr15	44426598	44426696	(57564493)	+	L2c	LINE/L2	3295	3385	(2)	1298892
2831	16.7	9.9	2.8	chr15	45048640	45049244	(56941945)	C	MER61F	LTR/ERV1	(23)	653	1	1299989
12225	14.8	1.6	3.5	chr15	45049247	45050086	(56941103)	C	LTR25-int	LTR/ERV1	(1)	7187	6359	1299989
12225	14.3	2.6	2.8	chr15	45050381	45052138	(56939051)	C	LTR25-int	LTR/ERV1	(830)	6358	3956	1299989
643	2.8	0.0	0.0	chr15	45198606	45198677	(56792512)	C	tRNA-His-CAY_	tRNA	(3)	72	1	1300216
643	2.8	0.0	0.0	chr15	45200413	45200484	(56790705)	C	tRNA-His-CAY_	tRNA	(3)	72	1	1300219
643	2.8	0.0	0.0	chr15	45201151	45201222	(56789967)	+	tRNA-His-CAY_	tRNA	1	72	(3)	1300220
585	19.6	4.2	1.4	chr15	55279565	55279704	(46711485)	+	MIRb	SINE/MIR	109	252	(16)	1315244
188	26.2	0.0	0.0	chr15	55279671	55279712	(46711477)	+	L2b	LINE/L2	3322	3363	(12)	1315245
941	15.4	5.6	0.0	chr15	55279909	55280077	(46711112)	C	MER5A	DNA/hAT-Charlie	(0)	189	11	1315246
1512	24.6	17.7	1.4	chr15	55286239	55286912	(46704277)	C	L2a	LINE/L2	(1)	3425	2614	1315264
2341	7.8	1.0	0.7	chr15	55318423	55318731	(46672458)	+	AluSx4	SINE/Alu	1	310	(0)	1315306
14	12.5	0.0	0.0	chr15	55318739	55318764	(46672425)	+	(AAC)n	Simple_repeat	1	26	(0)	1315307
200	18.9	2.8	9.2	chr15	55318778	55318853	(46672336)	+	MIRc	SINE/MIR	121	191	(77)	1315308
1781	20.8	13.8	4.6	chr15	56293445	56294075	(45697114)	+	MER77B	LTR/ERVL	3	700	(0)	1316957
205	33.8	4.0	7.2	chr15	57322339	57322491	(44668698)	+	L2b	LINE/L2	3023	3170	(205)	1318501
61	0.0	0.0	0.0	chr15	60398784	60398835	(41592354)	+	(GT)n	Simple_repeat	1	52	(0)	1323707
41	2.4	2.3	0.0	chr15	60398892	60398934	(41592255)	+	(GT)n	Simple_repeat	1	44	(0)	1323707
18	22.5	2.5	6.0	chr15	63504926	63505006	(38486183)	+	G-rich	Low_complexity	1	83	(0)	1328723
16	17.0	3.4	4.9	chr15	64460651	64460687	(37530502)	+	(GGCGG)n	Simple_repeat	1	34	(0)	1330440
28	3.3	0.0	0.0	chr15	64460688	64460718	(37530471)	+	(GAGCCG)n	Simple_repeat	1	31	(0)	1330441
289	23.6	7.2	3.8	chr15	64825290	64825429	(37165760)	C	MIRc	SINE/MIR	(101)	167	9	1331287
216	36.4	3.2	1.6	chr15	64894292	64894414	(37096775)	C	MIRb	SINE/MIR	(29)	239	115	1331450
974	0.9	0.0	0.8	chr15	65296051	65296167	(36695022)	+	U5	snRNA	1	116	(0)	1332324
859	6.9	0.0	0.8	chr15	65304677	65304793	(36686396)	+	U5	snRNA	1	116	(0)	1332345
706	12.5	0.0	1.8	chr15	65305005	65305116	(36686073)	+	AluSz	SINE/Alu	1	110	(202)	1332346
509	19.5	7.4	0.0	chr15	65305120	65305232	(36685957)	C	MER33	DNA/hAT-Charlie	(184)	140	19	1332347
638	4.0	0.0	0.0	chr15	65869059	65869133	(36122056)	C	tRNA-Gln-CAG	tRNA	(0)	75	1	1333537
1436	13.6	6.6	9.0	chr15	66356914	66357223	(35633966)	C	AluJb	SINE/Alu	(9)	303	2	1334510
12	12.2	3.7	0.0	chr15	66387261	66387287	(35603902)	+	(GCGCA)n	Simple_repeat	1	28	(0)	1334598
1576	18.6	6.3	9.9	chr15	66584235	66584646	(35406543)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1335002
322	23.7	6.6	1.9	chr15	66584647	66584657	(35406532)	C	L1MC5a	LINE/L1	(1651)	1126	1117	1335001
2017	10.1	2.7	0.3	chr15	66584837	66585123	(35406066)	+	AluSx	SINE/Alu	1	294	(18)	1335003
429	26.8	5.2	4.1	chr15	67879204	67879374	(34111815)	C	L1ME4b	LINE/L1	(4)	888	716	1337291
270	30.1	12.6	5.4	chr15	67879410	67879760	(34111429)	C	MLT1L	LTR/ERVL-MaLR	(31)	579	200	1337292
3165	10.7	6.3	2.0	chr15	68984157	68984654	(33006535)	+	HERV1_LTRa	LTR/ERV1	1	521	(0)	1339399
1228	17.6	6.6	4.0	chr15	68984655	68984864	(33006325)	+	LTR75	LTR/ERVL	345	562	(0)	1339398
596	16.6	12.7	2.7	chr15	68984865	68985012	(33006177)	+	Zaphod3	DNA/hAT-Tip100	165	329	(2294)	1339400
3327	13.9	4.1	11.8	chr15	68991613	68992346	(32998843)	C	LTR76	LTR/ERV1	(0)	675	1	1339417
17	4.9	0.0	0.0	chr15	70096656	70096676	(31894513)	+	(CA)n	Simple_repeat	1	21	(0)	1341461
324	30.0	10.4	3.7	chr15	70100887	70101073	(31890116)	C	MIRb	SINE/MIR	(20)	248	48	1341467
266	28.6	4.8	7.0	chr15	70492524	70492651	(31498538)	C	MIRb	SINE/MIR	(116)	152	28	1342250
237	25.9	26.3	0.0	chr15	75163004	75163115	(26828074)	+	MIR3	SINE/MIR	41	192	(16)	1350313
265	27.2	4.0	3.3	chr15	75163235	75163339	(26827850)	+	MIR3	SINE/MIR	30	140	(90)	1350314
12	11.6	3.3	3.2	chr15	75648019	75648048	(26343141)	+	(GGAC)n	Simple_repeat	1	31	(0)	1351302
1774	16.7	1.0	3.2	chr15	77725274	77725585	(24265604)	+	AluJo	SINE/Alu	1	305	(7)	1354545
725	30.0	3.0	3.0	chr15	80155320	80155522	(21835667)	C	MIRb	SINE/MIR	(23)	245	40	1359077
7762	6.7	2.5	0.3	chr15	80155523	80156467	(21834722)	C	LTR13A	LTR/ERVK	(0)	966	1	1359078
13	13.5	6.1	0.0	chr15	81092591	81092623	(20898566)	+	GA-rich	Low_complexity	1	35	(0)	1360690
205	28.1	0.0	1.5	chr15	82808991	82809055	(19182134)	+	MIR3	SINE/MIR	113	176	(32)	1363494
1398	19.4	3.1	3.2	chr15	83366095	83366444	(18624745)	C	L1MB8	LINE/L1	(1)	6177	5834	1364516
305	25.8	0.0	4.0	chr15	83366615	83366715	(18624474)	C	Charlie30a	DNA/hAT-Charlie	(57)	734	638	1364517
904	13.4	3.2	1.1	chr15	84654558	84654738	(17336451)	C	MER53	DNA/hAT	(7)	186	2	1366351
190	25.3	22.4	0.0	chr15	84654841	84654923	(17336266)	C	MIR1_Amn	SINE/MIR	(68)	162	56	1366352
1946	15.2	2.3	0.0	chr15	84734672	84734966	(17256223)	C	AluJb	SINE/Alu	(10)	302	1	1366543
2013	24.4	14.1	7.0	chr15	84844952	84845776	(17145413)	+	L1MEf	LINE/L1	26	912	(5635)	1366749
2147	12.9	0.0	2.8	chr15	84845777	84846094	(17145095)	+	AluSz	SINE/Alu	1	309	(3)	1366750
187	17.8	0.0	4.3	chr15	84981178	84981224	(17009965)	+	MIR3	SINE/MIR	81	125	(83)	1367056
1181	19.1	4.7	10.5	chr15	85167802	85168169	(16823020)	+	LTR37A	LTR/ERV1	1	349	(77)	1367349
5639	21.9	1.2	1.6	chr15	89079559	89080685	(12910504)	+	L1M4b	LINE/L1	11	1132	(5735)	1373611
249	23.2	4.7	5.8	chr15	89088986	89089072	(12902117)	+	L3	LINE/CR1	3819	3904	(195)	1373631
276	27.8	9.0	6.4	chr15	89089122	89089294	(12901895)	+	L3	LINE/CR1	3902	4079	(20)	1373631
669	0.0	0.0	0.0	chr15	89335073	89335145	(12656044)	+	tRNA-Arg-CGA_	tRNA	1	73	(3)	1374041
309	26.7	8.2	0.7	chr15	89894364	89894499	(12096690)	C	L1ME3G	LINE/L1	(407)	517	371	1375096
620	25.0	9.2	3.7	chr15	90184398	90184613	(11806576)	C	MIRb	SINE/MIR	(0)	268	40	1375845
385	27.9	14.7	3.5	chr15	90233113	90233301	(11757888)	+	MIRb	SINE/MIR	54	268	(0)	1375938
456	31.5	5.6	4.5	chr15	90901701	90901818	(11089371)	+	L1ME4c	LINE/L1	282	409	(421)	1377331
1708	17.4	4.4	1.4	chr15	90901819	90902167	(11089022)	C	MLT1A0	LTR/ERVL-MaLR	(1)	364	5	1377332
389	24.9	18.8	1.1	chr15	90932171	90932349	(11058840)	+	MIRb	SINE/MIR	34	251	(17)	1377369
2714	3.6	0.0	1.0	chr15	91478061	91478367	(10512822)	C	AluY	SINE/Alu	(6)	305	2	1378333
13	16.9	0.0	0.0	chr15	96409281	96409307	(5581882)	+	GA-rich	Low_complexity	1	27	(0)	1385833
2418	8.5	0.0	1.0	chr15	101532099	101532405	(458784)	C	AluSq2	SINE/Alu	(9)	304	1	1392911
1219	16.9	0.0	0.0	chr15	101532407	101532625	(458564)	C	L1MB3	LINE/L1	(208)	5975	5757	1392908
17	3.6	0.0	6.2	chr15	101724553	101724584	(266605)	+	(GGGGC)n	Simple_repeat	1	32	(0)	1393181
603	32.5	17.5	1.9	chr16	52803	53424	(90284921)	C	L2a	LINE/L2	(135)	3291	2528	1394121
2339	6.0	0.0	0.0	chr16	234079	234389	(90103956)	C	AluY	SINE/Alu	(0)	311	1	1394434
184	29.2	1.5	0.0	chr16	741340	741404	(89596941)	+	L2b	LINE/L2	3294	3359	(16)	1395135
18	26.1	0.0	8.3	chr16	1379275	1379370	(88958975)	+	(GCCCC)n	Simple_repeat	1	96	(0)	1395811
2223	8.6	0.0	1.4	chr16	1679774	1680065	(88658280)	+	AluYm1	SINE/Alu	1	288	(23)	1396241
1945	10.3	4.0	0.0	chr16	1963336	1963598	(88374747)	+	AluSx3	SINE/Alu	1	274	(37)	1396720
2405	9.2	0.0	1.6	chr16	1971219	1971535	(88366810)	C	AluSx	SINE/Alu	(0)	312	1	1396735
264	24.6	1.4	0.0	chr16	1971582	1971650	(88366695)	+	L2a	LINE/L2	3338	3407	(19)	1396734
15	24.9	0.0	3.9	chr16	2268061	2268111	(88070234)	+	(CCG)n	Simple_repeat	1	51	(0)	1397131
13	20.7	5.8	1.8	chr16	2473947	2473998	(87864347)	+	G-rich	Low_complexity	1	55	(0)	1397490
726	18.2	4.1	0.0	chr16	2906176	2906324	(87432021)	+	FLAM_C	SINE/Alu	11	297	(5)	1398148
1454	12.4	1.3	0.0	chr16	2906329	2906553	(87431792)	+	AluSx	SINE/Alu	1	228	(84)	1398149
5956	6.8	0.2	1.1	chr16	2906554	2907334	(87431011)	C	LTR13	LTR/ERVK	(8)	999	226	1398150
714	17.0	15.2	0.7	chr16	2981043	2981183	(87357162)	C	AluSx	SINE/Alu	(15)	297	133	1398284
2036	13.7	0.0	0.3	chr16	2981187	2981478	(87356867)	C	AluSz	SINE/Alu	(21)	291	1	1398285
13	24.8	4.2	0.0	chr16	3023699	3023746	(87314599)	+	(CCCCAG)n	Simple_repeat	1	50	(0)	1398347
672	0.0	0.0	0.0	chr16	3150674	3150746	(87187599)	+	tRNA-Arg-CGG	tRNA	1	73	(3)	1398597
2132	6.8	0.0	5.1	chr16	3151121	3151445	(87186900)	C	AluSp	SINE/Alu	(0)	313	2	1398598
629	4.1	0.0	0.0	chr16	3152900	3152972	(87185373)	+	tRNA-Arg-AGG	tRNA	1	73	(3)	1398603
654	1.4	0.0	0.0	chr16	3157405	3157477	(87180868)	C	tRNA-Lys-AAG	tRNA	(3)	73	1	1398614
617	0.0	0.0	0.0	chr16	3172048	3172119	(87166226)	+	tRNA-Pro-CCG	tRNA	1	72	(3)	1398650
667	18.2	4.0	2.7	chr16	3172584	3172730	(87165615)	+	MER33	DNA/hAT-Charlie	1	149	(175)	1398651
635	0.0	0.0	0.0	chr16	3175691	3175763	(87162582)	+	tRNA-Lys-AAG	tRNA	1	73	(3)	1398660
2018	10.1	1.4	1.7	chr16	3182232	3182528	(87155817)	+	AluSx	SINE/Alu	3	298	(14)	1398677
622	0.0	0.0	0.0	chr16	3182635	3182706	(87155639)	C	tRNA-Pro-CCY	tRNA	(3)	72	1	1398678
635	0.0	0.0	0.0	chr16	3184131	3184204	(87154141)	C	tRNA-Pro-CCA	tRNA	(1)	74	1	1398679
18	3.8	3.7	0.0	chr16	3184218	3184244	(87154101)	+	(TGT)n	Simple_repeat	1	28	(0)	1398680
28	11.2	0.0	0.0	chr16	3188045	3188084	(87150261)	+	(A)n	Simple_repeat	1	40	(0)	1398692
635	0.0	0.0	0.0	chr16	3188094	3188167	(87150178)	+	tRNA-Pro-CCA	tRNA	1	74	(1)	1398693
622	0.0	0.0	0.0	chr16	3189634	3189705	(87148640)	+	tRNA-Pro-CCY	tRNA	1	72	(3)	1398695
2481	6.9	0.3	0.3	chr16	3500367	3500670	(86837675)	C	AluSz	SINE/Alu	(8)	304	1	1399285
220	32.1	8.7	0.0	chr16	3500675	3500758	(86837587)	+	MIR	SINE/MIR	152	243	(19)	1399286
17	16.1	0.0	6.4	chr16	4272869	4272915	(86065430)	+	(GGC)n	Simple_repeat	1	47	(0)	1400803
463	22.1	2.6	3.4	chr16	4307060	4307176	(86031169)	+	MIRb	SINE/MIR	54	169	(99)	1400907
307	28.7	11.6	6.0	chr16	4307224	4307547	(86030798)	+	L2a	LINE/L2	2958	3383	(43)	1400908
2235	7.6	2.7	0.3	chr16	4475662	4475950	(85862395)	+	AluSq2	SINE/Alu	1	296	(17)	1401225
21	15.3	6.7	1.6	chr16	4614800	4614859	(85723486)	+	(CGCCTCC)n	Simple_repeat	1	64	(0)	1401530
12	0.0	0.0	14.7	chr16	4625103	4625136	(85713209)	+	(GGCGG)n	Simple_repeat	1	34	(0)	1401554
244	33.7	0.0	0.0	chr16	8134046	8134131	(82204214)	C	L2a	LINE/L2	(5)	3421	3336	1408390
381	30.3	0.7	2.7	chr16	8568018	8568163	(81770182)	+	MIRb	SINE/MIR	2	144	(124)	1409295
1953	7.6	0.0	10.5	chr16	9067972	9068275	(81270070)	C	AluSx	SINE/Alu	(6)	306	35	1410506
337	19.4	5.1	1.4	chr16	9068421	9068503	(81269842)	+	MLT1J1	LTR/ERVL-MaLR	72	157	(287)	1410507
21	30.8	0.0	0.0	chr16	11742653	11742720	(78595625)	+	(GCC)n	Simple_repeat	1	68	(0)	1416395
328	31.5	3.8	0.0	chr16	11976271	11976397	(78361948)	+	L2a	LINE/L2	3035	3166	(260)	1416955
1480	22.7	9.4	2.8	chr16	12041415	12041881	(78296464)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	5	1417134
610	1.4	0.0	0.0	chr16	14285893	14285964	(76052381)	+	tRNA-Thr-ACG	tRNA	1	72	(3)	1421772
426	32.7	4.1	4.0	chr16	15427655	15427816	(74910529)	C	MIRc	SINE/MIR	(101)	167	3	1424378
341	32.1	14.6	5.1	chr16	19521089	19521482	(70816863)	+	L2a	LINE/L2	2932	3369	(57)	1433765
480	23.6	8.2	1.6	chr16	21952323	21952447	(68385898)	C	MER5A1	DNA/hAT-Charlie	(0)	166	33	1438991
734	0.0	0.0	0.0	chr16	22297140	22297221	(68041124)	+	tRNA-Leu-CTY	tRNA	1	82	(3)	1439785
370	35.0	4.3	1.3	chr16	22298460	22298618	(68039727)	C	MIR	SINE/MIR	(97)	165	2	1439787
313	30.4	11.1	1.8	chr16	22298633	22298803	(68039542)	+	MIR	SINE/MIR	1	189	(73)	1439788
623	29.5	12.5	4.2	chr16	23556659	23556972	(66781373)	+	L2a	LINE/L2	3076	3425	(1)	1442572
229	19.6	2.1	0.0	chr16	23557030	23557075	(66781270)	+	MIR1_Amn	SINE/MIR	104	150	(80)	1442574
2319	15.7	6.4	6.4	chr16	29689531	29690013	(60648332)	+	LTR2B	LTR/ERV1	1	483	(0)	1456316
4438	7.4	3.3	1.2	chr16	29690014	29690520	(60647825)	C	L1PA13	LINE/L1	(148)	6015	5496	1456315
209	13.9	10.4	0.0	chr16	30761073	30761115	(59577230)	+	MIR3	SINE/MIR	99	146	(62)	1458817
241	18.2	17.5	0.0	chr16	30761083	30761148	(59577197)	+	MIRc	SINE/MIR	114	193	(75)	1458818
19	11.7	2.7	0.0	chr16	30893950	30893986	(59444359)	+	(CGGGGC)n	Simple_repeat	1	38	(0)	1459122
250	26.2	0.0	3.2	chr16	30894500	30894562	(59443783)	C	L2c	LINE/L2	(0)	3387	3327	1459124
1843	24.7	7.0	1.1	chr16	30894574	30895183	(59443162)	+	L1ME3A	LINE/L1	5456	6103	(70)	1459125
12	12.5	0.0	3.6	chr16	31458760	31458787	(58879558)	+	(CCCGC)n	Simple_repeat	1	28	(0)	1460365
1519	12.1	0.0	0.5	chr16	31509659	31509865	(58828480)	+	AluSz	SINE/Alu	1	206	(106)	1460461
235	23.0	20.3	3.8	chr16	31509922	31510052	(58828293)	C	L2b	LINE/L2	(5)	3421	3264	1460462
204	29.3	10.8	5.2	chr16	46690234	46690424	(43647921)	C	L2b	LINE/L2	(237)	3138	2936	1465821
234	25.6	0.0	8.2	chr16	56462821	56462918	(33875427)	C	Charlie4z	DNA/hAT-Charlie	(34)	133	44	1483084
625	8.4	0.0	0.0	chr16	57299951	57300033	(33038312)	+	tRNA-Leu-CTG	tRNA	1	83	(3)	1484766
358	19.7	10.2	0.8	chr16	57300190	57300285	(33038060)	+	AluJb	SINE/Alu	209	293	(9)	1484767
625	8.4	0.0	0.0	chr16	57300480	57300562	(33037783)	C	tRNA-Leu-CTG	tRNA	(3)	83	1	1484768
464	30.5	13.6	2.3	chr16	57808708	57808922	(32529423)	+	MIRb	SINE/MIR	3	245	(23)	1485784
1887	13.4	0.3	6.9	chr16	57811441	57811633	(32526712)	+	AluJr	SINE/Alu	1	189	(123)	1485792
2263	10.1	1.0	1.9	chr16	57811634	57811941	(32526404)	+	AluSz	SINE/Alu	1	305	(7)	1485793
1164	17.3	2.3	5.3	chr16	58793095	58793320	(31545025)	C	MER20	DNA/hAT-Charlie	(0)	219	1	1487852
426	31.1	14.6	2.0	chr16	67028440	67028642	(23309703)	C	MIRb	SINE/MIR	(15)	253	21	1500921
12	9.8	0.0	0.0	chr16	67029661	67029682	(23308663)	+	(GGGC)n	Simple_repeat	1	22	(0)	1500923
14	21.1	3.8	3.6	chr16	67029855	67029907	(23308438)	+	(GCG)n	Simple_repeat	1	55	(0)	1500924
342	32.8	7.6	5.5	chr16	67834041	67834221	(22504124)	+	MIRb	SINE/MIR	84	268	(0)	1502444
19	15.8	2.8	0.0	chr16	68085887	68085922	(22252423)	+	(TG)n	Simple_repeat	1	37	(0)	1502904
2594	5.5	0.3	0.3	chr16	69386211	69386520	(20951825)	+	AluSp	SINE/Alu	1	310	(3)	1505677
14	5.0	0.0	0.0	chr16	69565978	69565998	(20772347)	+	(GCG)n	Simple_repeat	1	21	(0)	1506105
1638	16.8	6.3	1.4	chr16	70345832	70346116	(19992229)	+	AluJb	SINE/Alu	1	300	(12)	1507780
2355	6.9	1.9	0.0	chr16	70346334	70346636	(19991709)	+	AluSg	SINE/Alu	1	309	(1)	1507781
593	4.1	0.0	0.0	chr16	71426493	71426565	(18911780)	+	tRNA-Met	tRNA	1	73	(3)	1509672
28245	1.6	0.0	0.0	chr16	72627275	72633298	(17705047)	+	L1PA2	LINE/L1	124	6149	(6)	1511761
13	9.7	2.6	5.1	chr16	74984289	74984315	(15354030)	+	(AATTA)n	Simple_repeat	2	26	(0)	1515867
236	28.0	21.9	1.4	chr16	74984322	74984466	(15353879)	C	MIR	SINE/MIR	(77)	185	3	1515868
11948	10.7	3.8	4.4	chr16	75127621	75128780	(15209565)	+	MER4-int	LTR/ERV1	5110	6313	(285)	1516122
271	17.4	0.0	0.0	chr16	80767752	80767797	(9570548)	C	L2a	LINE/L2	(6)	3420	3375	1525865
19	20.3	0.0	2.4	chr16	81005134	81005146	(9333199)	+	(AT)n	Simple_repeat	1	13	(0)	1526291
2069	8.4	5.8	0.0	chr16	81005147	81005420	(9332925)	+	AluSz	SINE/Alu	1	291	(21)	1526292
192	27.6	12.1	0.0	chr16	81007744	81007801	(9330544)	C	L2a	LINE/L2	(2)	3424	3359	1526294
2324	9.9	0.0	0.0	chr16	81007825	81008127	(9330218)	+	AluSx1	SINE/Alu	1	303	(9)	1526295
27	27.6	1.9	2.8	chr16	81035818	81035922	(9302423)	+	(GGC)n	Simple_repeat	1	107	(0)	1526357
15	20.7	5.0	3.2	chr16	81315299	81315358	(9022987)	+	G-rich	Low_complexity	1	63	(0)	1527044
16	8.2	0.0	0.0	chr16	82170264	82170289	(8168056)	+	(CGCCC)n	Simple_repeat	1	26	(0)	1528775
2227	11.6	0.3	0.0	chr16	83952243	83952545	(6385800)	+	AluSq2	SINE/Alu	1	304	(9)	1531917
464	30.5	9.7	0.5	chr16	83952546	83952604	(6385741)	C	L2a	LINE/L2	(166)	3260	3198	1531916
479	28.3	3.7	4.8	chr16	83952615	83952803	(6385542)	C	MIR	SINE/MIR	(45)	217	31	1531918
1931	14.2	2.0	0.3	chr16	84970282	84970569	(5367776)	C	AluSz	SINE/Alu	(18)	294	2	1533945
225	13.9	0.0	0.0	chr16	84970601	84970636	(5367709)	+	L2b	LINE/L2	3330	3365	(10)	1533946
2377	4.4	0.0	1.4	chr16	85021875	85022171	(5316174)	+	AluY	SINE/Alu	1	293	(18)	1534036
1722	21.1	7.3	3.7	chr16	85022185	85022239	(5316106)	+	L1MC4	LINE/L1	7114	7168	(874)	1534037
2018	13.5	0.3	1.0	chr16	85022240	85022550	(5315795)	+	AluSz	SINE/Alu	2	310	(2)	1534038
2941	25.8	6.3	2.1	chr16	85046675	85047999	(5290346)	C	L1MD2	LINE/L1	(5217)	1423	47	1534085
1753	15.4	4.5	1.3	chr16	85050874	85051171	(5287174)	+	AluJr4	SINE/Alu	1	308	(4)	1534092
405	33.3	7.0	0.6	chr16	85329138	85329297	(5009048)	+	MIRb	SINE/MIR	24	194	(74)	1534646
214	26.1	4.4	0.0	chr16	85331022	85331086	(5007259)	+	MIRc	SINE/MIR	84	151	(117)	1534649
13	13.9	7.8	3.6	chr16	85365353	85365403	(4972942)	+	(CACTCTT)n	Simple_repeat	1	55	(0)	1534716
513	26.9	1.4	4.0	chr16	85420997	85421147	(4917198)	+	MIR	SINE/MIR	111	257	(5)	1534801
18	8.8	2.5	4.9	chr16	85555105	85555144	(4783201)	+	(GCC)n	Simple_repeat	1	41	(0)	1535054
235	30.8	5.4	4.2	chr16	85564123	85564288	(4774057)	C	L2c	LINE/L2	(169)	3218	3051	1535067
14	12.1	0.0	3.5	chr16	85564376	85564404	(4773941)	+	(GTG)n	Simple_repeat	1	29	(0)	1535068
193	36.0	0.0	9.5	chr16	85564426	85564551	(4773794)	C	L2c	LINE/L2	(151)	3236	3123	1535069
519	33.5	4.4	2.0	chr16	85569343	85569586	(4768759)	+	MIR	SINE/MIR	12	261	(1)	1535077
244	22.5	13.0	0.9	chr16	85610788	85610871	(4727474)	+	MIRb	SINE/MIR	84	172	(96)	1535142
1135	13.4	4.3	0.0	chr16	85687974	85688152	(4650193)	+	AluSg4	SINE/Alu	115	301	(9)	1535211
489	13.8	0.0	3.8	chr16	85688166	85688245	(4650100)	+	AluJo	SINE/Alu	14	90	(222)	1535212
2252	9.9	0.7	0.0	chr16	85688267	85688570	(4649775)	+	AluSx1	SINE/Alu	2	307	(5)	1535213
1253	17.4	6.8	10.8	chr16	87860401	87860678	(2477667)	+	MER4B	LTR/ERV1	313	517	(93)	1539181
44	27.4	1.8	4.0	chr16	88492082	88492252	(1846093)	+	(CCCT)n	Simple_repeat	1	174	(0)	1540027
2298	7.1	5.5	0.7	chr16	88802547	88802842	(1535503)	C	AluSx1	SINE/Alu	(1)	311	1	1540467
14	23.1	3.4	3.3	chr16	89093689	89093747	(1244598)	+	(CCACGG)n	Simple_repeat	1	61	(0)	1540793
365	28.8	3.8	9.8	chr16	89241276	89241529	(1096816)	C	LTR55	LTR/ERVL?	(181)	367	130	1540967
1115	19.1	0.0	3.3	chr16	89241689	89241898	(1096447)	C	AluJr	SINE/Alu	(0)	312	110	1540968
2472	5.4	0.0	0.0	chr16	89948269	89948562	(389783)	C	AluY	SINE/Alu	(17)	294	1	1542143
228	26.7	7.2	0.0	chr17	5419038	5419127	(77838314)	+	L2a	LINE/L2	3148	3244	(182)	1555104
805	23.4	10.1	0.0	chr17	5420756	5420952	(77836489)	C	MER20	DNA/hAT-Charlie	(0)	219	1	1555106
4015	14.9	2.0	1.9	chr17	6993802	6994143	(76263298)	+	MER67C	LTR/ERV1	363	710	(1)	1558056
701	22.2	9.4	2.9	chr17	8119377	8119654	(75137787)	C	MER33	DNA/hAT-Charlie	(22)	302	5	1560128
643	2.8	0.0	0.0	chr17	8119752	8119823	(75137618)	+	tRNA-Gln-CAG	tRNA	1	72	(3)	1560129
707	2.4	0.0	0.0	chr17	8120314	8120395	(75137046)	C	tRNA-Leu-CTY	tRNA	(3)	82	1	1560130
542	4.1	0.0	17.1	chr17	8120925	8121012	(75136429)	+	tRNA-Arg-AGA	tRNA	1	73	(3)	1560131
3368	26.6	10.9	4.8	chr17	8138308	8138688	(75118753)	C	L2a	LINE/L2	(1677)	1742	1320	1560160
779	1.2	0.0	0.0	chr17	8138878	8138962	(75118479)	C	tRNA-Ser-TCG	tRNA	(0)	85	1	1560170
741	1.2	0.0	0.0	chr17	8186866	8186947	(75070494)	+	tRNA-Ser-AGY	tRNA	1	82	(3)	1560264
693	1.3	0.0	0.0	chr17	8187160	8187235	(75070206)	+	tRNA-Thr-ACY	tRNA	1	76	(1)	1560265
678	0.0	0.0	0.0	chr17	8187593	8187666	(75069775)	+	tRNA-Ile-ATT	tRNA	1	74	(3)	1560266
13	20.4	2.4	2.4	chr17	8211461	8211501	(75045940)	+	(TTCC)n	Simple_repeat	1	42	(0)	1560326
289	27.0	10.7	1.0	chr17	8211563	8211663	(75045778)	+	MLT1K	LTR/ERVL-MaLR	4	115	(480)	1560327
1996	11.3	5.0	0.0	chr17	8211736	8212018	(75045423)	C	AluSp	SINE/Alu	(14)	299	2	1560328
226	27.4	0.0	0.0	chr17	8221309	8221359	(75036082)	+	MIRc	SINE/MIR	103	153	(115)	1560358
659	1.4	0.0	0.0	chr17	8221548	8221619	(75035822)	+	tRNA-Gly-GGA	tRNA	1	72	(3)	1560359
653	0.0	0.0	0.0	chr17	8222238	8222309	(75035132)	C	tRNA-Asp-GAY	tRNA	(3)	72	1	1560360
652	1.4	0.0	0.0	chr17	8222831	8222904	(75034537)	C	tRNA-Pro-CCG	tRNA	(1)	74	1	1560361
654	1.4	0.0	0.0	chr17	8226991	8227064	(75030377)	C	tRNA-Ile-ATT	tRNA	(3)	74	1	1560367
441	26.1	10.4	2.5	chr17	17279699	17279897	(65977544)	C	MIR	SINE/MIR	(0)	268	62	1576332
2012	6.2	0.0	4.4	chr17	17279983	17280129	(65977312)	+	AluSx1	SINE/Alu	1	142	(170)	1576333
1979	1.4	0.0	0.0	chr17	19112420	19112636	(64144805)	C	U3	snRNA	(0)	217	1	1579881
4145	9.2	3.7	6.5	chr17	21255497	21255965	(62001476)	C	MER4D	LTR/ERV1	(259)	644	204	1583931
1928	5.2	0.0	1.7	chr17	21255966	21256198	(62001243)	+	AluY	SINE/Alu	1	229	(82)	1583933
25829	3.3	0.2	0.1	chr17	27099165	27105176	(56152265)	C	L1PA2	LINE/L1	(7)	6148	124	1586191
206	23.2	6.7	0.0	chr17	28719340	28719395	(54538046)	+	MIR3	SINE/MIR	67	126	(82)	1589195
1067	5.5	0.0	0.0	chr17	28719633	28719760	(54537681)	+	AluYh3	SINE/Alu	142	269	(42)	1589196
13	19.1	0.0	0.0	chr17	28861665	28861694	(54395747)	+	(GGACA)n	Simple_repeat	1	30	(0)	1589505
763	18.4	7.9	0.6	chr17	30116439	30116613	(53140828)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	1591965
652	2.7	0.0	0.0	chr17	38861683	38861755	(44395686)	C	tRNA-Cys-TGY	tRNA	(2)	73	1	1608756
2069	7.8	0.0	8.7	chr17	38867173	38867494	(44389947)	C	AluSx3	SINE/Alu	(17)	294	1	1608774
641	2.7	0.0	0.0	chr17	38867645	38867717	(44389724)	+	tRNA-Cys-TGY	tRNA	1	73	(2)	1608775
191	34.5	3.3	2.2	chr17	38868509	38868597	(44388844)	C	MIRc	SINE/MIR	(53)	215	126	1608776
641	2.7	0.0	0.0	chr17	39154490	39154562	(44102879)	C	tRNA-Cys-TGY	tRNA	(2)	73	1	1609433
17	24.6	2.3	0.0	chr17	39461509	39461552	(43795889)	+	(GT)n	Simple_repeat	1	45	(0)	1610148
15	19.0	5.4	0.0	chr17	39629466	39629502	(43627939)	+	(TC)n	Simple_repeat	1	39	(0)	1610490
15	19.8	5.6	1.8	chr17	39667519	39667572	(43589869)	+	(CCTGCC)n	Simple_repeat	1	57	(0)	1610552
584	28.7	14.4	2.5	chr17	39688303	39688624	(43568817)	+	L2a	LINE/L2	2617	2983	(436)	1610581
106	1.8	3.5	0.0	chr17	40140318	40140430	(43117011)	+	(AC)n	Simple_repeat	1	117	(0)	1611417
18	19.4	0.0	0.0	chr17	40140646	40140686	(43116755)	+	(GCGGCA)n	Simple_repeat	1	41	(0)	1611418
354	35.0	5.3	6.6	chr17	40648547	40648925	(42608516)	+	L2b	LINE/L2	2992	3365	(10)	1612427
221	39.2	7.2	2.1	chr17	40827957	40828193	(42429248)	+	L2b	LINE/L2	2563	2812	(607)	1612718
2413	8.0	0.0	0.0	chr17	41677958	41678268	(41579173)	+	AluSc8	SINE/Alu	1	311	(0)	1614026
643	15.9	7.0	12.6	chr17	41678269	41678329	(41579112)	+	MER41B	LTR/ERV1	230	272	(362)	1614025
857	19.9	8.6	0.0	chr17	41678325	41678495	(41578946)	+	LTR27D	LTR/ERV1	287	473	(142)	1614027
710	16.9	6.8	3.8	chr17	41678503	41678687	(41578754)	+	MER31B	LTR/ERV1	274	464	(2)	1614028
13	5.3	0.0	0.0	chr17	41688978	41688997	(41568444)	+	(CCG)n	Simple_repeat	1	20	(0)	1614055
17	12.1	0.0	5.0	chr17	42609505	42609544	(40647897)	+	(CGGAGC)n	Simple_repeat	1	40	(0)	1615974
12	13.9	0.0	8.1	chr17	42609671	42609707	(40647734)	+	(GGCG)n	Simple_repeat	1	37	(0)	1615975
21	8.3	7.9	0.0	chr17	43367817	43367854	(39889587)	+	(AC)n	Simple_repeat	1	41	(0)	1617634
680	25.3	1.7	0.6	chr17	43367908	43368082	(39889359)	C	U2	snRNA	(6)	182	6	1617635
244	26.0	0.4	3.5	chr17	44066908	44067009	(39190432)	C	MIRc	SINE/MIR	(79)	183	88	1619169
2428	9.1	0.0	0.0	chr17	44067018	44067325	(39190116)	+	AluSx	SINE/Alu	1	308	(4)	1619170
12	17.8	6.2	5.9	chr17	44557402	44557465	(38699976)	+	(AGCGAG)n	Simple_repeat	1	68	(0)	1620208
292	34.8	8.4	2.4	chr17	44907390	44907601	(38349840)	+	MIRb	SINE/MIR	17	242	(26)	1620963
53	15.0	4.5	0.0	chr17	45197575	45197685	(38059756)	+	GA-rich	Low_complexity	1	116	(0)	1621570
12	17.0	2.9	2.8	chr17	46923240	46923274	(36334167)	+	(GCGAG)n	Simple_repeat	1	36	(0)	1625000
187	23.7	0.0	0.0	chr17	47890000	47890037	(35367404)	+	L2c	LINE/L2	3341	3378	(9)	1626898
1963	13.1	0.3	2.8	chr17	48478029	48478348	(34779093)	C	AluSx1	SINE/Alu	(0)	312	2	1627941
13	28.3	1.7	3.3	chr17	48546772	48546830	(34710611)	+	GA-rich	Low_complexity	1	60	(0)	1628081
262	26.2	7.3	13.7	chr17	48739240	48739352	(34518089)	C	MIRb	SINE/MIR	(35)	233	128	1628382
678	12.3	0.6	22.2	chr17	48739353	48739564	(34517877)	+	FRAM	SINE/Alu	1	166	(10)	1628383
26	3.1	3.0	0.0	chr17	48991211	48991243	(34266198)	+	(AGGGGC)n	Simple_repeat	1	34	(0)	1629003
658	2.7	0.0	0.0	chr17	49192528	49192600	(34064841)	+	tRNA-Gln-CAA	tRNA	1	73	(2)	1629400
474	30.8	6.1	1.1	chr17	50362231	50362417	(32895024)	C	MIR	SINE/MIR	(58)	204	8	1631640
1281	20.8	8.3	0.0	chr17	50362784	50362926	(32894515)	C	AluJo	SINE/Alu	(24)	288	122	1631641
12	11.9	10.8	0.0	chr17	50867665	50867701	(32389740)	+	(CCTTCTC)n	Simple_repeat	1	41	(0)	1632612
2313	10.5	0.0	0.0	chr17	50933329	50933624	(32323817)	+	AluSg	SINE/Alu	1	296	(14)	1632769
1968	15.2	4.9	3.5	chr17	50933643	50933917	(32323524)	C	Tigger3a	DNA/TcMar-Tigger	(2)	346	66	1632770
4116	21.2	15.2	9.3	chr17	57062099	57062359	(26195082)	C	Zaphod	DNA/hAT-Tip100	(2938)	1093	926	1642566
2057	12.0	0.3	3.5	chr17	57062360	57062675	(26194766)	C	AluSz	SINE/Alu	(6)	306	1	1642571
16	18.9	0.0	0.0	chr17	58005479	58005531	(25251910)	+	(GCTACG)n	Simple_repeat	1	53	(0)	1644248
1578	18.6	4.9	0.4	chr17	58631185	58631459	(24625982)	+	AluSz6	SINE/Alu	6	293	(19)	1645372
725	21.4	11.5	2.0	chr17	58631641	58631836	(24625605)	C	U3	snRNA	(0)	217	1	1645373
800	22.9	6.1	1.1	chr17	58658800	58658987	(24598454)	C	AluJr	SINE/Alu	(5)	307	110	1645453
472	20.1	7.9	3.5	chr17	58659153	58659296	(24598145)	C	U1	snRNA	(5)	160	10	1645454
886	18.4	0.6	1.2	chr17	58679526	58679690	(24577751)	C	U1	snRNA	(1)	164	1	1645511
292	31.7	1.1	4.7	chr17	59107090	59107281	(24150160)	C	MER5A	DNA/hAT-Charlie	(4)	185	1	1646446
956	10.5	0.0	3.0	chr17	59892262	59892394	(23365047)	+	FLAM_C	SINE/Alu	3	131	(12)	1648195
573	19.6	1.4	1.6	chr17	59892530	59892669	(23364772)	C	MIRb	SINE/MIR	(90)	178	38	1648196
24	10.5	2.4	0.0	chr17	60525931	60525971	(22731470)	+	(TCC)n	Simple_repeat	1	42	(0)	1649441
21	18.0	8.7	0.0	chr17	62478994	62479062	(20778379)	+	(CCGGCGC)n	Simple_repeat	1	75	(0)	1653081
308	27.6	6.2	1.3	chr17	62704597	62704772	(20552669)	+	MER5A	DNA/hAT-Charlie	6	178	(0)	1653551
13	21.5	0.0	4.8	chr17	63842651	63842692	(19414749)	+	(CCCGC)n	Simple_repeat	1	42	(0)	1655439
23	28.4	4.4	1.7	chr17	63842676	63842810	(19414631)	+	G-rich	Low_complexity	1	138	(0)	1655440
1287	14.5	7.4	3.1	chr17	68019554	68019772	(15237669)	C	L1MA4	LINE/L1	(41)	6259	6029	1663340
487	11.8	0.0	0.0	chr17	68019900	68019967	(15237474)	C	tRNA-Arg-AGG	tRNA	(6)	70	3	1663342
3765	16.6	8.2	0.9	chr17	72997555	72998222	(10259219)	+	MER44C	DNA/TcMar-Tigger	2	722	(11)	1671400
350	26.8	10.9	5.3	chr17	73231497	73231685	(10025756)	C	L3b	LINE/CR1	(91)	5141	4941	1671900
642	0.0	0.0	0.0	chr17	75033906	75033978	(8223463)	+	tRNA-Arg-AGG	tRNA	1	73	(3)	1675212
630	0.0	0.0	0.0	chr17	75034432	75034503	(8222938)	C	tRNA-Arg-AGG	tRNA	(4)	72	1	1675213
599	4.1	0.0	0.0	chr17	75035113	75035185	(8222256)	+	tRNA-Arg-CGG	tRNA	1	73	(3)	1675215
194	30.8	11.7	1.1	chr17	75262043	75262134	(7995307)	+	MIRc	SINE/MIR	3	105	(163)	1675711
2447	7.0	0.0	2.5	chr17	76739885	76740200	(6517241)	+	AluY	SINE/Alu	1	308	(3)	1678638
1892	16.4	2.2	1.9	chr17	76845356	76845666	(6411775)	+	AluJo	SINE/Alu	1	312	(0)	1678877
1254	23.8	3.7	4.5	chr17	76845667	76845833	(6411608)	C	MER68B	LTR/ERVL	(382)	182	25	1678876
1532	14.8	0.0	8.2	chr17	77505624	77505799	(5751642)	C	AluJr	SINE/Alu	(33)	279	126	1680143
299	31.9	3.6	4.9	chr17	78146558	78146699	(5110742)	+	MIR3	SINE/MIR	22	161	(47)	1681268
3513	11.8	7.8	0.9	chr17	78272043	78272566	(4984875)	C	LTR6A	LTR/ERV1	(1)	563	1	1681538
102	18.5	2.8	0.0	chr17	78290011	78290224	(4967217)	+	(GT)n	Simple_repeat	1	220	(0)	1681578
318	31.8	16.4	1.1	chr17	81665674	81665854	(1591587)	+	MIRb	SINE/MIR	45	258	(10)	1686612
235	25.3	14.6	0.0	chr17	81665925	81666070	(1591371)	+	L2	LINE/L2	113	283	(3136)	1686613
12	23.8	2.2	2.1	chr17	82065754	82065799	(1191642)	+	G-rich	Low_complexity	1	47	(0)	1687089
13	19.4	4.9	0.0	chr17	82065901	82065941	(1191500)	+	(AGAGGTC)n	Simple_repeat	1	43	(0)	1687090
2264	10.0	0.7	0.0	chr17	82099951	82100251	(1157190)	+	AluSg	SINE/Alu	1	303	(7)	1687138
12	23.8	2.2	2.1	chr17	82301583	82301628	(955813)	+	G-rich	Low_complexity	1	47	(0)	1687451
364	30.0	7.4	7.0	chr17	82461940	82462154	(795287)	+	MIRb	SINE/MIR	2	217	(51)	1687674
18	15.1	4.5	0.0	chr17	82519467	82519510	(737931)	+	(GCGCCC)n	Simple_repeat	1	46	(0)	1687801
2516	25.1	10.4	2.3	chr18	774131	774977	(79598308)	+	L2a	LINE/L2	2110	3035	(384)	1690421
2218	10.3	0.7	2.8	chr18	815152	815441	(79557844)	+	AluSq2	SINE/Alu	1	284	(29)	1690511
1391	16.9	1.2	3.8	chr18	831877	832141	(79541144)	C	MER44B	DNA/TcMar-Tigger	(0)	550	293	1690553
1104	20.0	2.3	2.3	chr18	832540	832754	(79540531)	C	MER44B	DNA/TcMar-Tigger	(250)	300	86	1690553
2371	9.8	0.0	0.7	chr18	832755	833061	(79540224)	C	AluSx1	SINE/Alu	(7)	305	1	1690554
3506	6.5	4.6	10.0	chr18	841638	841996	(79531289)	+	LTR2C	LTR/ERV1	195	500	(1)	1690577
412	34.7	3.5	4.5	chr18	841997	842298	(79530987)	+	L2b	LINE/L2	2977	3302	(85)	1690576
278	19.1	0.0	16.0	chr18	2994611	2994637	(77378648)	+	Zaphod	DNA/hAT-Tip100	3941	3959	(72)	1693565
755	13.8	13.7	10.0	chr18	2994638	2994847	(77378438)	C	MER20	DNA/hAT-Charlie	(0)	219	1	1693566
278	19.1	0.0	16.0	chr18	2994848	2994925	(77378360)	+	Zaphod	DNA/hAT-Tip100	3960	4029	(2)	1693565
279	33.2	8.5	4.2	chr18	3245657	3245889	(77127396)	+	L2c	LINE/L2	2992	3233	(142)	1694026
299	15.8	6.6	0.0	chr18	3261648	3261704	(77111581)	C	MER53	DNA/hAT	(130)	63	3	1694047
601	19.1	13.8	2.5	chr18	9102016	9102214	(71271071)	C	L1MC5	LINE/L1	(0)	9304	9080	1702462
7327	18.6	3.1	5.0	chr18	9876145	9876951	(70496334)	+	L1MC3	LINE/L1	7004	7785	(0)	1703784
640	20.9	0.7	0.0	chr18	9894676	9894809	(70478476)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	256	1703824
488	20.4	2.8	0.0	chr18	9894810	9894912	(70478373)	C	LTR62	LTR/ERVL	(0)	709	604	1703825
1299	18.5	8.3	0.4	chr18	9894929	9895171	(70478114)	+	AluJr4	SINE/Alu	19	282	(30)	1703826
186	34.8	16.6	2.8	chr18	9918288	9918577	(70454708)	+	L2c	LINE/L2	1817	2154	(1265)	1703867
710	24.7	9.6	3.5	chr18	11951806	11951984	(68421301)	+	LTR50	LTR/ERVL	430	618	(177)	1706652
2422	13.9	6.2	0.2	chr18	11951985	11952409	(68420876)	C	LTR47A	LTR/ERVL	(0)	452	1	1706653
12	4.3	8.3	0.0	chr18	22934307	22934330	(57438955)	+	(TGTTT)n	Simple_repeat	1	26	(0)	1715237
3359	14.9	3.6	0.5	chr18	23502524	23503082	(56870203)	+	MER34D	LTR/ERV1	3	579	(0)	1716342
419	21.8	3.8	1.0	chr18	23528769	23528870	(56844415)	+	MER5A1	DNA/hAT-Charlie	8	112	(54)	1716389
1198	8.2	0.0	0.0	chr18	23528885	23529030	(56844255)	C	AluSp	SINE/Alu	(18)	295	150	1716390
455	9.4	0.0	0.0	chr18	23585263	23585326	(56787959)	C	AluJb	SINE/Alu	(197)	115	52	1716470
222	33.1	2.8	2.1	chr18	23585653	23585794	(56787491)	+	MIRc	SINE/MIR	38	180	(88)	1716471
3016	19.2	6.5	1.2	chr18	35971355	35972182	(44401103)	+	L1MB5	LINE/L1	5258	6174	(0)	1734073
13	17.6	2.4	4.7	chr18	48008376	48008417	(32364868)	+	(CCT)n	Simple_repeat	1	43	(0)	1751164
13	27.6	4.1	2.6	chr18	48008418	48008438	(32364847)	+	(CGGCCC)n	Simple_repeat	23	76	(0)	1751163
220	21.9	0.0	0.0	chr18	48008702	48008742	(32364543)	+	L2c	LINE/L2	3344	3384	(3)	1751165
27450	2.4	0.2	0.1	chr18	55887413	55893439	(24479846)	C	L1PA3	LINE/L1	(0)	6155	124	1763339
17	26.8	1.4	4.1	chr18	57435084	57435155	(22938130)	+	(CTCC)n	Simple_repeat	1	73	(0)	1765551
191	32.4	15.5	4.7	chr18	57930451	57930599	(22442686)	C	L3	LINE/CR1	(3013)	1086	919	1766482
360	33.0	15.2	2.4	chr18	57930653	57931034	(22442251)	C	L3	LINE/CR1	(3299)	800	361	1766482
395	25.5	11.1	0.0	chr18	79584284	79584444	(788841)	C	MLT1C	LTR/ERVL-MaLR	(285)	182	2	1795586
11	22.3	1.9	5.7	chr18	79584773	79584824	(788461)	+	(CAGCAGG)n	Simple_repeat	1	53	(0)	1795587
3643	7.4	0.9	0.0	chr19	487753	488211	(58129405)	+	LTR2	LTR/ERV1	1	463	(0)	1797012
634	5.5	0.0	6.6	chr19	488212	488235	(58129381)	+	AluSx	SINE/Alu	114	133	(179)	1797011
2507	5.3	0.0	0.0	chr19	488241	488539	(58129077)	+	AluYm1	SINE/Alu	1	299	(12)	1797013
14	23.3	3.4	3.3	chr19	532837	532895	(58084721)	+	G-rich	Low_complexity	1	61	(0)	1797097
1772	15.9	3.7	0.0	chr19	556309	556591	(58061025)	C	AluJo	SINE/Alu	(18)	294	1	1797143
1009	0.0	0.0	0.0	chr19	1021522	1021628	(57595988)	+	U6	snRNA	1	107	(0)	1798081
2529	7.7	0.0	0.0	chr19	1194128	1194437	(57423179)	C	AluSx1	SINE/Alu	(2)	310	1	1798383
11	17.5	1.9	9.1	chr19	1208019	1208072	(57409544)	+	(CTGCC)n	Simple_repeat	1	55	(0)	1798411
226	32.6	4.3	0.0	chr19	1315683	1315771	(57301845)	+	MIR	SINE/MIR	45	137	(125)	1798556
671	1.4	0.0	0.0	chr19	1383362	1383434	(57234182)	C	tRNA-Phe-TTY	tRNA	(3)	73	1	1798705
689	0.0	0.0	0.0	chr19	1383563	1383637	(57233979)	+	tRNA-Asn-AAC	tRNA	1	75	(2)	1798706
307	25.0	19.4	0.0	chr19	1445568	1445671	(57171945)	+	L2c	LINE/L2	3288	3423	(3)	1798791
186	35.1	0.0	0.0	chr19	1445693	1445769	(57171847)	+	L2b	LINE/L2	3297	3373	(2)	1798792
180	26.8	1.8	0.0	chr19	1605069	1605124	(57012492)	C	MIR1_Amn	SINE/MIR	(60)	170	114	1799128
191	30.4	5.1	0.0	chr19	1606258	1606313	(57011303)	+	L2b	LINE/L2	3123	3181	(194)	1799133
210	16.7	0.0	0.0	chr19	1685347	1685382	(56932234)	+	MIRc	SINE/MIR	113	148	(120)	1799291
249	33.1	7.7	1.1	chr19	1875106	1875288	(56742328)	+	L1M5	LINE/L1	5570	5765	(359)	1799655
265	31.2	5.5	4.2	chr19	1875429	1875572	(56742044)	+	L1ME4b	LINE/L1	717	862	(30)	1799658
957	6.9	0.0	0.0	chr19	2163376	2163491	(56454125)	C	AluSp	SINE/Alu	(197)	116	1	1800271
2203	11.5	0.0	0.0	chr19	2840491	2840786	(55776830)	C	AluSx1	SINE/Alu	(16)	296	1	1801761
2187	10.1	0.0	0.3	chr19	2945533	2945829	(55671787)	+	AluSq	SINE/Alu	1	296	(17)	1801971
402	25.4	21.2	0.5	chr19	3047759	3047946	(55569670)	+	L2a	LINE/L2	3172	3412	(14)	1802259
2163	10.7	1.0	0.7	chr19	3047947	3048244	(55569372)	+	AluSx1	SINE/Alu	1	299	(13)	1802260
130	29.7	2.1	2.4	chr19	3368949	3369416	(55248200)	+	(TCTCTC)n	Simple_repeat	1	467	(0)	1803077
217	23.3	0.0	1.6	chr19	3374628	3374688	(55242928)	C	L2c	LINE/L2	(230)	3157	3098	1803094
2013	13.0	0.0	1.7	chr19	3388541	3388833	(55228783)	+	AluJr4	SINE/Alu	1	288	(24)	1803128
1095	13.6	0.0	0.0	chr19	3388859	3389012	(55228604)	+	AluSx	SINE/Alu	137	290	(22)	1803129
26	0.0	0.0	0.0	chr19	3389147	3389171	(55228445)	+	(AATG)n	Simple_repeat	1	25	(0)	1803130
2351	9.7	0.0	0.3	chr19	3579878	3580177	(55037439)	C	AluSx3	SINE/Alu	(10)	301	3	1803574
1715	22.9	5.7	2.9	chr19	3580178	3580436	(55037180)	C	L1MB5	LINE/L1	(275)	5899	5643	1803573
20	8.0	0.0	0.0	chr19	3580468	3580494	(55037122)	+	(TG)n	Simple_repeat	1	27	(0)	1803575
2360	9.5	0.0	0.7	chr19	3627762	3628067	(54989549)	+	AluSx	SINE/Alu	1	304	(8)	1803674
2314	8.2	0.3	0.0	chr19	3732511	3732803	(54884813)	C	AluSx1	SINE/Alu	(13)	299	6	1803912
438	20.5	5.5	2.7	chr19	3762089	3762241	(54855375)	+	MIRb	SINE/MIR	102	259	(3)	1803979
182	43.8	3.0	1.2	chr19	4578528	4578691	(54038925)	C	L3	LINE/CR1	(63)	4036	3870	1805914
181	27.7	4.7	6.5	chr19	4578690	4578797	(54038819)	+	L2c	LINE/L2	2822	2927	(492)	1805915
329	24.1	6.1	0.0	chr19	4578852	4578959	(54038657)	+	L2c	LINE/L2	3049	3163	(224)	1805915
1914	14.8	1.7	0.0	chr19	4600070	4600359	(54017257)	C	AluJo	SINE/Alu	(16)	296	2	1805970
605	5.5	0.0	0.0	chr19	4724635	4724707	(53892909)	C	tRNA-Val-GTG	tRNA	(3)	73	1	1806266
12	22.1	0.0	0.0	chr19	4724859	4724890	(53892726)	+	A-rich	Low_complexity	1	32	(0)	1806267
13	13.2	0.0	0.0	chr19	4724908	4724932	(53892684)	+	(CCCA)n	Simple_repeat	1	25	(0)	1806268
2258	10.0	0.7	0.0	chr19	5083965	5084254	(53533362)	+	AluSq2	SINE/Alu	1	292	(21)	1807173
218	28.5	18.8	0.8	chr19	5309367	5309497	(53308119)	C	MIR3	SINE/MIR	(34)	234	69	1807622
27	35.1	0.7	3.5	chr19	5799137	5799278	(52818338)	+	(TC)n	Simple_repeat	1	143	(0)	1808879
204	34.3	6.2	1.9	chr19	5892844	5892950	(52724666)	C	MIR	SINE/MIR	(113)	149	38	1809085
13	15.8	2.7	2.6	chr19	5903566	5903602	(52714014)	+	(CCCTCGG)n	Simple_repeat	1	38	(0)	1809109
260	20.9	4.5	5.4	chr19	6530257	6530479	(52087137)	+	HERVIP10FH-int	LTR/ERV1	778	998	(4104)	1810497
50	18.0	6.4	2.4	chr19	6530484	6530640	(52086976)	+	(AGACAG)n	Simple_repeat	1	167	(0)	1810498
12103	8.6	0.1	1.0	chr19	6600098	6601666	(52015950)	+	HERVE_a-int	LTR/ERV1	6292	7847	(0)	1810681
40	22.6	1.3	0.7	chr19	7197919	7198077	(51419539)	+	(GT)n	Simple_repeat	1	160	(0)	1812252
192	33.9	0.0	11.0	chr19	8002619	8002764	(50614852)	C	L2c	LINE/L2	(173)	3214	3085	1814125
3817	11.9	1.4	6.8	chr19	8033232	8033694	(50583922)	C	LTR19B	LTR/ERV1	(140)	440	1	1814222
913	11.7	1.9	7.2	chr19	8033696	8033861	(50583755)	C	HERVFH19-int	LTR/ERV1	(1)	7718	7562	1814222
2490	7.9	0.0	0.0	chr19	8033898	8034200	(50583416)	C	AluY	SINE/Alu	(8)	303	1	1814224
2184	7.2	0.3	2.0	chr19	8444084	8444387	(50173229)	C	AluSx1	SINE/Alu	(13)	299	1	1815351
1656	22.1	9.4	3.3	chr19	8444388	8444606	(50173010)	C	Charlie12	DNA/hAT-Charlie	(2573)	300	59	1815348
252	17.5	23.1	3.6	chr19	9309485	9309567	(49308049)	C	MER5A	DNA/hAT-Charlie	(0)	189	86	1817218
12	20.0	5.0	0.0	chr19	9968927	9968966	(48648650)	+	(GTCAGTG)n	Simple_repeat	1	42	(0)	1818591
362	24.7	13.8	2.4	chr19	10085781	10085974	(48531642)	C	MIR	SINE/MIR	(18)	244	32	1818870
255	32.3	5.7	2.0	chr19	10270728	10270828	(48346788)	+	MIR	SINE/MIR	117	221	(41)	1819334
18	4.8	0.0	0.0	chr19	10286358	10286379	(48331237)	+	(GT)n	Simple_repeat	1	22	(0)	1819376
1260	16.0	0.0	2.5	chr19	10286380	10286579	(48331037)	C	AluJr	SINE/Alu	(31)	281	87	1819377
341	17.4	6.7	7.5	chr19	10492329	10492434	(48125182)	+	MIR	SINE/MIR	93	197	(65)	1819894
2393	5.6	0.0	2.6	chr19	10492438	10492742	(48124874)	+	AluSx4	SINE/Alu	2	298	(12)	1819895
264	28.8	4.8	0.0	chr19	11374303	11374382	(47243234)	C	MIRb	SINE/MIR	(84)	184	101	1822167
1295	21.2	7.8	1.7	chr19	11597922	11598250	(47019366)	C	MER57E3	LTR/ERV1	(1)	486	138	1822765
2537	5.9	0.7	0.0	chr19	11737256	11737560	(46880056)	C	AluSp	SINE/Alu	(5)	308	2	1823043
1962	14.8	0.3	0.7	chr19	11836035	11836331	(46781285)	+	AluSz	SINE/Alu	4	299	(13)	1823232
23875	5.5	1.2	0.1	chr19	12024462	12027348	(46590268)	+	HERVK9-int	LTR/ERVK	3104	6021	(0)	1823597
3297	8.8	4.8	0.4	chr19	12027357	12027814	(46589802)	+	MER9a3	LTR/ERVK	34	512	(0)	1823598
635	25.7	4.6	0.5	chr19	12640510	12640696	(45976920)	+	AluJr	SINE/Alu	118	312	(0)	1824903
12	19.9	0.0	8.3	chr19	12784302	12784349	(45833267)	+	(ACAG)n	Simple_repeat	1	48	(0)	1825206
11	29.4	1.5	4.4	chr19	12792580	12792646	(45824970)	+	(AAGCGG)n	Simple_repeat	1	68	(0)	1825218
321	28.4	39.7	3.6	chr19	12836629	12836798	(45780818)	C	MIRb	SINE/MIR	(6)	262	31	1825330
1383	11.8	4.5	14.5	chr19	12919616	12919786	(45697830)	C	AluJb	SINE/Alu	(15)	297	131	1825530
2390	7.8	0.7	0.0	chr19	12919787	12920082	(45697534)	+	AluSx1	SINE/Alu	1	298	(14)	1825531
13	18.3	2.6	2.5	chr19	12957099	12957137	(45660479)	+	(CCGCGG)n	Simple_repeat	1	40	(0)	1825617
245	27.9	0.0	1.6	chr19	13116869	13116930	(45500686)	C	MIRb	SINE/MIR	(93)	175	115	1825904
23	21.1	3.3	0.0	chr19	13118318	13118404	(45499212)	+	(GCGGAG)n	Simple_repeat	1	89	(0)	1825909
275	29.4	4.9	6.2	chr19	13152478	13152622	(45464994)	+	MIR	SINE/MIR	113	255	(7)	1825986
19	0.0	2.9	5.7	chr19	13154187	13154222	(45463394)	+	(TGTT)n	Simple_repeat	1	35	(0)	1825987
237	31.7	2.1	0.9	chr19	13731949	13732059	(44885557)	+	MIRb	SINE/MIR	79	196	(72)	1827637
15	5.6	0.0	0.0	chr19	14031559	14031577	(44586039)	+	(GT)n	Simple_repeat	1	19	(0)	1828390
1018	12.8	3.8	1.6	chr19	14417702	14417883	(44199733)	+	AluJb	SINE/Alu	120	305	(7)	1829437
1740	10.3	15.8	0.0	chr19	14417888	14418149	(44199467)	+	AluSz	SINE/Alu	1	311	(1)	1829439
290	25.2	2.9	0.0	chr19	16628871	16628969	(41988647)	C	MER20	DNA/hAT-Charlie	(3)	216	115	1834294
199	13.9	12.2	0.0	chr19	17306083	17306125	(41311491)	C	MIRc	SINE/MIR	(136)	132	84	1835990
231	36.2	6.1	2.5	chr19	17333841	17334044	(41283572)	+	L2c	LINE/L2	2916	3127	(260)	1836047
659	26.1	10.0	1.0	chr19	17334054	17334254	(41283362)	C	MIR	SINE/MIR	(6)	256	36	1836048
12	20.5	2.0	5.9	chr19	17334383	17334432	(41283184)	+	(CCCCAG)n	Simple_repeat	1	51	(0)	1836049
2451	5.2	0.0	0.0	chr19	17511032	17511319	(41106297)	C	AluSc8	SINE/Alu	(22)	289	2	1836555
14	14.8	5.1	2.4	chr19	17686817	17686855	(40930761)	+	GA-rich	Low_complexity	1	41	(0)	1837006
211	28.3	17.3	0.1	chr19	17860799	17860938	(40756678)	+	MIR3	SINE/MIR	8	172	(36)	1837465
2350	6.4	0.0	0.0	chr19	17873476	17873755	(40743861)	+	AluSg	SINE/Alu	1	280	(30)	1837493
225	37.7	0.9	3.6	chr19	18222500	18222609	(40395007)	+	MIR	SINE/MIR	28	134	(128)	1838401
21	18.4	0.0	0.0	chr19	18222611	18222648	(40394968)	+	(T)n	Simple_repeat	1	38	(0)	1838402
12	25.0	6.3	1.5	chr19	18280608	18280670	(40336946)	+	(TGCGCT)n	Simple_repeat	1	67	(0)	1838527
244	25.4	15.1	1.7	chr19	18282838	18282957	(40334659)	+	L2b	LINE/L2	2940	3078	(297)	1838532
291	25.2	7.5	1.0	chr19	18340195	18340294	(40277322)	+	MIR	SINE/MIR	38	144	(118)	1838666
196	15.6	0.0	0.0	chr19	18340441	18340472	(40277144)	C	MIR1_Amn	SINE/MIR	(76)	154	123	1838667
31	11.4	0.0	0.0	chr19	18415571	18415619	(40201997)	+	(GGA)n	Simple_repeat	1	49	(0)	1838862
254	38.0	0.0	0.0	chr19	18415660	18415772	(40201844)	C	L2a	LINE/L2	(308)	3118	3006	1838863
196	20.0	5.2	0.0	chr19	18544021	18544075	(40073541)	C	MIR3	SINE/MIR	(69)	139	82	1839068
258	29.7	12.7	2.6	chr19	18544301	18544490	(40073126)	+	L2a	LINE/L2	3196	3407	(19)	1839069
271	32.6	8.8	2.3	chr19	18558306	18558513	(40059103)	+	MIRb	SINE/MIR	38	256	(6)	1839121
416	31.3	6.9	1.8	chr19	19062989	19063154	(39554462)	+	MIR	SINE/MIR	40	214	(48)	1840178
1551	12.9	0.5	0.0	chr19	21602641	21602857	(37014759)	C	AluSx4	SINE/Alu	(18)	292	75	1844301
3123	10.0	4.7	1.1	chr19	21602858	21603332	(37014284)	+	LTR15	LTR/ERV1	1	493	(0)	1844302
1527	22.0	7.8	6.4	chr19	28614818	28615273	(30002343)	+	LTR2	LTR/ERV1	1	463	(0)	1849048
1770	18.7	0.0	1.9	chr19	28615532	28615847	(30001769)	+	AluJb	SINE/Alu	1	310	(2)	1849050
204	31.5	4.4	5.3	chr19	30690145	30690258	(27927358)	C	L2c	LINE/L2	(4)	3383	3271	1852188
687	1.3	0.0	0.0	chr19	33177057	33177131	(25440485)	+	tRNA-Thr-ACY	tRNA	1	75	(2)	1856355
3402	22.2	8.5	6.3	chr19	36176781	36177307	(22440309)	+	L1MC5	LINE/L1	8463	9012	(292)	1862040
276	28.3	4.0	0.8	chr19	38314931	38314977	(20302639)	+	L2c	LINE/L2	3082	3131	(256)	1866370
2296	6.8	4.6	0.0	chr19	38314978	38315270	(20302346)	+	AluSp	SINE/Alu	2	308	(5)	1866377
276	28.3	4.0	0.8	chr19	38315271	38315343	(20302273)	+	L2c	LINE/L2	3132	3206	(181)	1866370
251	33.0	3.1	2.1	chr19	38506585	38506680	(20110936)	+	MIR	SINE/MIR	76	172	(90)	1866812
2137	10.3	0.6	3.1	chr19	39309174	39309494	(19308122)	+	AluSq2	SINE/Alu	1	313	(0)	1868807
2245	7.0	3.7	0.0	chr19	39391764	39392050	(19225566)	+	AluSz	SINE/Alu	13	310	(2)	1868985
681	28.0	3.9	5.2	chr19	40272786	40273054	(18344562)	+	MIR	SINE/MIR	2	261	(1)	1870625
2301	9.5	0.3	0.0	chr19	40273062	40273356	(18344260)	+	AluSg	SINE/Alu	1	296	(14)	1870626
530	24.8	14.6	5.8	chr19	40403330	40403552	(18214064)	C	MIR	SINE/MIR	(0)	262	17	1870960
728	31.9	7.0	5.7	chr19	40424526	40425238	(18192378)	C	L2a	LINE/L2	(145)	3242	2523	1871021
13	29.6	0.0	0.0	chr19	40425604	40425648	(18191968)	+	(CGG)n	Simple_repeat	1	45	(0)	1871022
330	31.7	13.1	5.1	chr19	40426326	40426521	(18191095)	+	MIRb	SINE/MIR	54	267	(1)	1871023
891	16.7	7.5	4.8	chr19	40463604	40463771	(18153845)	C	AluSz6	SINE/Alu	(6)	306	134	1871147
2305	9.5	0.0	0.3	chr19	40463772	40464066	(18153550)	C	AluSq4	SINE/Alu	(17)	294	1	1871148
2148	11.7	0.3	4.3	chr19	40464069	40464393	(18153223)	C	AluJr	SINE/Alu	(0)	312	1	1871149
28	19.2	0.0	0.0	chr19	40605493	40605551	(18012065)	+	(GGCGGA)n	Simple_repeat	1	59	(0)	1871506
382	28.9	9.6	6.6	chr19	41706945	41707365	(16910251)	+	L2a	LINE/L2	2940	3419	(7)	1873776
344	33.2	15.1	0.5	chr19	41875511	41875879	(16741737)	C	L1ME3Cz	LINE/L1	(164)	833	402	1874100
12	12.8	5.6	2.6	chr19	42325733	42325768	(16291848)	+	(GCTCCC)n	Simple_repeat	1	38	(0)	1875034
366	22.6	7.1	2.0	chr19	42396641	42396773	(16220843)	+	MSR1	Satellite	1	139	(3)	1875197
1869	11.5	5.5	3.3	chr19	43776816	43777119	(14840497)	+	AluSx3	SINE/Alu	1	311	(0)	1877652
43	2.3	2.2	0.0	chr19	43777299	43777343	(14840273)	+	(GT)n	Simple_repeat	1	46	(0)	1877653
1414	28.8	5.8	4.0	chr19	44676916	44677417	(13940199)	C	MLT1K	LTR/ERVL-MaLR	(72)	523	11	1879304
43	0.0	4.5	0.0	chr19	44677433	44677476	(13940140)	+	(GA)n	Simple_repeat	1	46	(0)	1879306
198	34.5	9.8	2.9	chr19	44677495	44677664	(13939952)	C	L3	LINE/CR1	(176)	3923	3741	1879307
56	25.0	4.0	1.1	chr19	44848657	44848829	(13768787)	+	(CT)n	Simple_repeat	1	180	(0)	1879792
882	18.3	4.2	0.0	chr19	44849804	44849983	(13767633)	+	L1MB8	LINE/L1	5990	6177	(1)	1879793
901	19.9	1.9	0.0	chr19	44850054	44850209	(13767407)	+	AluJb	SINE/Alu	137	295	(17)	1879794
3524	7.7	1.5	0.0	chr19	44913972	44914427	(13703189)	+	LTR2	LTR/ERV1	1	463	(0)	1879952
246	27.1	9.3	5.4	chr19	45078897	45079070	(13538546)	+	MIRc	SINE/MIR	2	174	(94)	1880412
661	29.8	4.7	3.9	chr19	45338485	45338739	(13278877)	C	L2b	LINE/L2	(4)	3371	3115	1881054
2287	8.6	0.3	0.0	chr19	45338907	45339196	(13278420)	C	AluSq2	SINE/Alu	(17)	296	6	1881055
803	0.0	0.0	0.0	chr19	45478602	45478687	(13138929)	C	tRNA-SeC(e)-TGA	tRNA	(3)	86	1	1881421
423	27.9	13.9	1.4	chr19	45646425	45646562	(12971054)	+	MIR	SINE/MIR	10	167	(95)	1881882
47	26.9	5.2	4.9	chr19	45668352	45668659	(12948957)	+	(GTCTCT)n	Simple_repeat	1	324	(0)	1881954
2360	10.1	0.0	1.3	chr19	45863559	45863874	(12753742)	C	AluSz	SINE/Alu	(0)	312	1	1882443
2314	10.1	0.3	0.0	chr19	46415802	46416108	(12201508)	+	AluSq2	SINE/Alu	2	309	(4)	1883604
2103	7.9	0.7	6.9	chr19	46416109	46416289	(12201327)	+	AluSx	SINE/Alu	136	297	(15)	1883603
408	31.6	3.6	5.1	chr19	46416290	46416337	(12201279)	+	L2a	LINE/L2	2852	2898	(521)	1883602
227	33.0	4.3	0.0	chr19	47023311	47023398	(11594218)	C	MIRc	SINE/MIR	(119)	149	58	1885089
26	0.0	0.0	0.0	chr19	47226328	47226352	(11391264)	+	(CCCTGG)n	Simple_repeat	1	25	(0)	1885597
2002	12.1	7.4	0.3	chr19	47242603	47242892	(11374724)	C	AluSq	SINE/Alu	(1)	312	1	1885630
30	29.3	0.8	5.3	chr19	47242925	47243056	(11374560)	+	(TG)n	Simple_repeat	1	133	(0)	1885631
2081	9.8	0.3	1.4	chr19	47312979	47313274	(11304342)	C	AluSg	SINE/Alu	(16)	294	2	1885838
47	0.0	0.0	0.0	chr19	47743418	47743457	(10874159)	+	(GT)n	Simple_repeat	1	40	(0)	1886953
942	18.4	16.0	12.0	chr19	48110376	48110462	(10507154)	+	MLT1B	LTR/ERVL-MaLR	301	379	(11)	1887967
1415	26.7	11.0	2.6	chr19	48588604	48589545	(10028071)	C	L2a	LINE/L2	(133)	3293	2253	1889155
375	16.3	3.2	0.0	chr19	48890935	48891026	(9726590)	+	L1MB8	LINE/L1	5769	5863	(315)	1889874
238	24.7	7.2	1.9	chr19	49151379	49151455	(9466161)	C	MIR3	SINE/MIR	(34)	174	98	1890478
453	30.0	1.8	4.8	chr19	49421609	49421776	(9195840)	C	MIRb	SINE/MIR	(91)	177	15	1891073
2221	12.0	0.0	0.3	chr19	49452714	49453021	(9164595)	C	AluSx	SINE/Alu	(5)	307	1	1891124
12	19.3	0.0	5.1	chr19	49929309	49929347	(8688269)	+	(CCCGCTC)n	Simple_repeat	1	39	(0)	1892228
2332	11.5	0.0	0.0	chr19	50329985	50330296	(8287320)	+	AluSx1	SINE/Alu	1	312	(0)	1893283
2198	10.2	0.3	1.6	chr19	50373674	50374008	(8243608)	C	AluSx3	SINE/Alu	(0)	311	1	1893371
2148	11.6	1.7	0.0	chr19	50374009	50374302	(8243314)	C	AluSq2	SINE/Alu	(13)	300	2	1893372
490	16.7	1.4	1.4	chr19	50415001	50415228	(8202388)	+	MSR1	Satellite	1	227	(2)	1893464
269	30.7	13.7	0.0	chr19	50640220	50640434	(7977182)	+	MIRb	SINE/MIR	3	252	(10)	1893985
426	25.2	7.0	0.0	chr19	50640512	50640630	(7976986)	C	MIRb	SINE/MIR	(47)	221	94	1893986
1548	8.1	8.7	0.0	chr19	50640636	50640845	(7976771)	C	MER30	DNA/hAT-Charlie	(0)	230	1	1893987
12	20.6	6.7	0.0	chr19	51366809	51366853	(7250763)	+	(TCCCTA)n	Simple_repeat	1	48	(0)	1895482
258	14.9	0.0	2.1	chr19	51441343	51441390	(7176226)	+	L1P5	LINE/L1	5711	5757	(397)	1895634
446	26.3	0.0	0.0	chr19	51441432	51441568	(7176048)	C	L1PBa	LINE/L1	(6639)	224	88	1895635
3028	14.9	1.3	4.4	chr19	51441614	51442180	(7175436)	+	LTR43B	LTR/ERV1	24	572	(0)	1895636
3336	19.2	1.2	4.7	chr19	51547055	51547721	(7069895)	+	MER54B	LTR/ERVL	150	793	(0)	1895798
231	30.5	17.9	4.9	chr19	51701246	51701339	(6916277)	C	L2	LINE/L2	(422)	2997	2871	1896074
2051	15.0	2.5	5.8	chr19	52896742	52897158	(5720458)	+	MER51C	LTR/ERV1	124	526	(114)	1898428
188	35.5	5.1	2.1	chr19	54210081	54210175	(4407441)	C	L2a	LINE/L2	(17)	3409	3312	1901312
2154	10.8	1.0	2.9	chr19	54448652	54448966	(4168650)	+	AluSg	SINE/Alu	1	309	(1)	1901778
1779	11.8	10.6	0.0	chr19	55216200	55216462	(3401154)	C	AluSx	SINE/Alu	(15)	297	4	1903254
498	21.9	4.7	3.1	chr19	55391217	55391343	(3226273)	+	MIR	SINE/MIR	12	140	(122)	1903630
194	24.0	5.7	0.0	chr19	55391392	55391441	(3226175)	+	L2a	LINE/L2	3345	3397	(29)	1903631
578	24.1	1.3	0.8	chr19	55391551	55391704	(3225912)	+	MIR	SINE/MIR	41	190	(72)	1903632
798	26.7	11.4	3.1	chr19	55457858	55458066	(3159550)	+	L1MB3	LINE/L1	5969	6182	(1)	1903769
20	5.6	7.9	0.0	chr19	55458067	55458105	(3159511)	+	(AAAAG)n	Simple_repeat	1	42	(0)	1903772
191	32.5	2.5	0.0	chr19	55458137	55458213	(3159403)	C	MIR3	SINE/MIR	(67)	141	63	1903773
2577	4.6	1.3	0.0	chr19	55653385	55653688	(2963928)	+	AluSc8	SINE/Alu	2	309	(2)	1904234
13	23.2	0.0	2.4	chr19	55655318	55655359	(2962257)	+	G-rich	Low_complexity	1	42	(0)	1904237
12	36.1	0.0	2.7	chr19	58362332	58362405	(255211)	+	(ATGA)n	Simple_repeat	1	74	(0)	1909403
238	31.0	15.5	0.6	chr19	58519001	58519159	(98457)	+	L2	LINE/L2	2650	2836	(583)	1909663
483	31.5	11.0	1.8	chr2	3602253	3602649	(238590880)	+	L2a	LINE/L2	2369	2806	(613)	1914722
1691	15.5	3.9	4.1	chr2	6997751	6998113	(235195416)	+	L1MA9	LINE/L1	5950	6311	(1)	1919283
267	32.7	2.7	0.0	chr2	6998325	6998431	(235195098)	C	MIRc	SINE/MIR	(49)	219	110	1919284
5458	7.5	5.4	15.0	chr2	8894647	8895631	(233297898)	C	LTR12D	LTR/ERV1	(0)	1254	370	1922013
382	33.9	6.0	3.3	chr2	9057796	9058003	(233135526)	C	L1M4	LINE/L1	(1713)	4433	4213	1922245
2053	13.8	1.3	0.0	chr2	9058004	9058307	(233135222)	+	AluSx1	SINE/Alu	1	308	(4)	1922246
399	11.5	14.5	6.2	chr2	10120423	10120535	(232072994)	+	FLAM_C	SINE/Alu	12	135	(8)	1924224
12	6.6	12.5	0.0	chr2	14634375	14634406	(227559123)	+	(GCCCGC)n	Simple_repeat	1	36	(0)	1931491
562	25.5	8.1	11.8	chr2	24794292	24794562	(217398967)	+	MIRb	SINE/MIR	3	262	(6)	1946751
1207	30.2	13.1	10.0	chr2	24796670	24797943	(217395586)	C	L2c	LINE/L2	(167)	3220	1902	1946755
1017	17.2	14.0	0.0	chr2	24797944	24798146	(217395383)	+	Tigger4a	DNA/TcMar-Tigger	1	236	(0)	1946757
261	29.7	16.9	0.0	chr2	25878942	25879069	(216314460)	C	MIRc	SINE/MIR	(113)	155	2	1948760
339	25.2	1.2	2.4	chr2	25879135	25879234	(216314295)	+	L2a	LINE/L2	3293	3420	(6)	1948761
30	17.0	0.0	0.0	chr2	26245248	26245300	(215948229)	+	(GT)n	Simple_repeat	1	53	(0)	1949599
16	19.6	0.0	4.4	chr2	27033067	27033111	(215160418)	+	(CGG)n	Simple_repeat	1	45	(0)	1951085
354	25.5	15.2	1.6	chr2	27033254	27033456	(215160073)	C	MIR3	SINE/MIR	(39)	229	1	1951086
577	6.8	0.0	0.0	chr2	27051214	27051287	(215142242)	+	tRNA-Ala-GCY	tRNA	1	74	(2)	1951108
364	23.1	7.5	5.2	chr2	27354291	27354445	(214839084)	C	Tigger13a	DNA/TcMar-Tigger	(566)	205	47	1951647
1912	10.1	2.2	2.2	chr2	27354479	27354756	(214838773)	+	AluSx1	SINE/Alu	1	278	(34)	1951653
397	29.7	13.8	1.9	chr2	27354762	27355239	(214838290)	C	L1ME3G	LINE/L1	(317)	607	68	1951654
16	22.7	3.5	1.7	chr2	32011040	32011097	(210182432)	+	(GGCGCAG)n	Simple_repeat	1	60	(0)	1959290
227	24.8	20.2	0.0	chr2	32277327	32277438	(209916091)	+	MIR1_Amn	SINE/MIR	6	143	(125)	1959941
233	33.0	0.0	3.1	chr2	32277501	32277597	(209915932)	C	MIR3	SINE/MIR	(45)	163	70	1959942
702	20.9	8.4	4.7	chr2	32950259	32950274	(209243255)	+	AluSx3	SINE/Alu	118	132	(179)	1961247
2299	9.0	1.3	0.7	chr2	32950275	32950575	(209242954)	+	AluSz6	SINE/Alu	1	303	(9)	1961248
35	0.0	0.0	0.0	chr2	36966899	36966928	(205226601)	+	(AC)n	Simple_repeat	1	30	(0)	1966853
310	33.8	11.7	4.1	chr2	37196705	37197019	(204996510)	C	L1M4b	LINE/L1	(6274)	593	252	1967324
5484	12.7	0.6	0.4	chr2	38516002	38516841	(203676688)	+	L1MC1	LINE/L1	5482	6323	(10)	1969385
2201	10.4	0.3	0.0	chr2	38827867	38828155	(203365374)	C	AluSp	SINE/Alu	(23)	290	1	1970061
27	19.5	3.1	5.9	chr2	39437114	39437211	(202756318)	+	(CGC)n	Simple_repeat	1	101	(0)	1971190
1460	5.4	0.0	0.0	chr2	45610776	45610941	(196582588)	+	AluYh3	SINE/Alu	130	295	(16)	1980960
667	24.9	3.4	1.3	chr2	55268545	55268728	(186924801)	C	MIR3	SINE/MIR	(17)	191	3	1995599
12	10.4	6.1	2.9	chr2	55419886	55419918	(186773611)	+	(CCCG)n	Simple_repeat	1	35	(0)	1995872
18	12.4	0.0	2.7	chr2	55420095	55420131	(186773398)	+	(GGCGCG)n	Simple_repeat	1	37	(0)	1995873
2470	5.7	0.0	1.0	chr2	60882393	60882693	(181310836)	+	AluSx	SINE/Alu	1	298	(14)	2003274
2347	7.6	0.0	2.1	chr2	61004973	61005262	(181188267)	+	AluSp	SINE/Alu	1	284	(29)	2003476
28	0.0	0.0	0.0	chr2	61005263	61005289	(181188240)	+	(AAAC)n	Simple_repeat	1	27	(0)	2003477
2612	16.6	0.0	0.0	chr2	64256174	64256583	(177936946)	+	HERVH-int	LTR/ERV1	4740	5149	(2564)	2009073
1270	13.4	1.9	0.5	chr2	64256617	64256819	(177936710)	+	HERVH-int	LTR/ERV1	5614	5819	(1894)	2009073
2574	7.8	4.6	1.3	chr2	64256818	64257196	(177936333)	+	HERVH-int	LTR/ERV1	7322	7713	(0)	2009073
1505	22.8	10.7	1.1	chr2	65294512	65295062	(176898467)	C	L2a	LINE/L2	(0)	3426	2817	2010998
395	32.2	6.1	5.7	chr2	65295234	65295444	(176898085)	C	MamGypLTR1b	LTR/Gypsy	(85)	697	486	2010999
16668	4.2	0.0	0.1	chr2	68677862	68680074	(173513455)	C	L1PA3	LINE/L1	(3811)	2335	125	2015930
23769	13.9	2.2	3.1	chr2	69790238	69792971	(172400558)	C	LTR25-int	LTR/ERV1	(1)	7187	4480	2017767
240	33.3	3.8	0.0	chr2	69978434	69978535	(172214994)	+	MIRb	SINE/MIR	113	218	(50)	2018098
13	17.7	4.2	4.0	chr2	70554078	70554125	(171639404)	+	G-rich	Low_complexity	1	50	(0)	2019278
45	0.0	0.0	0.0	chr2	70687594	70687634	(171505895)	+	(AAAC)n	Simple_repeat	1	41	(0)	2019464
332	30.1	18.8	1.6	chr2	73385178	73385366	(168808163)	C	MIRb	SINE/MIR	(14)	254	26	2023642
12	31.9	0.0	0.0	chr2	73385981	73386030	(168807499)	+	(GAGGTG)n	Simple_repeat	1	50	(0)	2023646
403	33.2	10.5	5.9	chr2	74048488	74049144	(168144385)	C	L2c	LINE/L2	(5)	3382	2658	2024692
361	34.3	9.5	0.7	chr2	74148358	74148636	(168044893)	C	L2	LINE/L2	(589)	2830	2525	2024871
1951	14.4	0.3	0.7	chr2	74252598	74252881	(167940648)	C	AluJb	SINE/Alu	(23)	289	7	2025086
316	19.5	2.5	1.3	chr2	74252885	74252962	(167940567)	C	L1ME3Cz	LINE/L1	(112)	885	807	2025085
201	24.7	4.3	11.9	chr2	84925970	84926070	(157267459)	C	MER91C	DNA/hAT-Tip100	(31)	109	17	2039689
1612	10.5	11.8	0.4	chr2	85546187	85546425	(156647104)	+	AluY	SINE/Alu	21	290	(21)	2041002
1873	11.4	5.2	0.0	chr2	85546437	85546707	(156646822)	+	AluSx1	SINE/Alu	3	288	(24)	2041003
304	30.6	3.9	0.0	chr2	85612390	85612487	(156581042)	+	MIR	SINE/MIR	81	182	(80)	2041128
2545	8.0	0.0	0.0	chr2	85612637	85612960	(156580569)	C	AluSx	SINE/Alu	(0)	312	1	2041129
18	11.6	0.0	4.9	chr2	85616281	85616321	(156577208)	+	G-rich	Low_complexity	1	41	(0)	2041141
222	34.2	1.2	0.0	chr2	85866112	85866190	(156327339)	+	L2b	LINE/L2	2339	2418	(1001)	2041644
421	22.6	8.2	1.0	chr2	88016105	88016206	(154177323)	C	AluJo	SINE/Alu	(195)	117	8	2045131
923	20.9	0.0	1.6	chr2	88016358	88016547	(154176982)	C	U2	snRNA	(1)	187	1	2045132
907	27.8	10.4	9.0	chr2	88250176	88250732	(153942797)	+	MLT1L	LTR/ERVL-MaLR	43	608	(2)	2045567
376	25.9	3.7	4.2	chr2	88250835	88250999	(153942530)	C	L2	LINE/L2	(597)	2822	2659	2045568
21	8.8	2.8	0.0	chr2	91478098	91478133	(150715396)	+	(CCG)n	Simple_repeat	1	37	(0)	2048369
3764	14.8	7.2	9.4	chr2	95120048	95120606	(147072923)	+	L1MB7	LINE/L1	5598	6175	(9)	2050211
404	30.3	7.2	0.6	chr2	95120620	95120775	(147072754)	+	MIR	SINE/MIR	26	192	(70)	2050214
2399	7.9	1.3	0.0	chr2	95120840	95121142	(147072387)	+	AluSg	SINE/Alu	1	307	(3)	2050215
392	30.8	10.6	1.0	chr2	96321083	96321284	(145872245)	C	MIRb	SINE/MIR	(32)	230	8	2051941
12	24.4	4.4	4.2	chr2	96321923	96321990	(145871539)	+	(GGAGGC)n	Simple_repeat	1	71	(0)	2051942
2918	14.4	1.1	1.1	chr2	96918679	96919141	(145274388)	+	LTR2	LTR/ERV1	1	463	(0)	2053007
186	21.6	2.6	0.0	chr2	101002432	101002468	(141191061)	C	L3b	LINE/CR1	(101)	5131	5094	2058833
240	29.8	6.0	0.0	chr2	102069667	102069760	(140123769)	C	MIRb	SINE/MIR	(82)	186	87	2060598
2605	13.1	1.8	2.0	chr2	107746255	107746623	(134446906)	+	L1PA4	LINE/L1	5320	5693	(619)	2068293
8363	5.7	19.0	0.1	chr2	107746624	107747902	(134445627)	C	LTR12C	LTR/ERV1	(0)	1579	2	2068294
261	30.8	1.0	4.6	chr2	109173518	109173626	(133019903)	+	MER58B	DNA/hAT-Charlie	213	317	(24)	2070385
363	27.6	7.3	9.0	chr2	112690842	112691064	(129502465)	C	MLT1N2	LTR/ERVL-MaLR	(90)	472	254	2075565
1084	11.6	0.0	0.7	chr2	112691140	112691286	(129502243)	C	AluJb	SINE/Alu	(80)	232	87	2075566
12	18.1	0.0	3.0	chr2	121530606	121530638	(120662891)	+	(CGCCC)n	Simple_repeat	1	33	(0)	2088812
4734	12.3	4.9	5.2	chr2	126307724	126308563	(115884966)	C	LTR1A2	LTR/ERV1	(0)	837	1	2095747
2510	5.6	0.0	0.0	chr2	126308579	126308865	(115884664)	+	AluY	SINE/Alu	1	287	(24)	2095748
14	19.7	2.3	2.3	chr2	127064658	127064700	(115128829)	+	(GAGCAGG)n	Simple_repeat	1	44	(0)	2096829
1982	15.7	6.6	4.7	chr2	127857370	127857798	(114335731)	+	MER67A	LTR/ERV1	106	543	(0)	2098143
13	19.3	2.2	4.3	chr2	130356489	130356533	(111836996)	+	(GCGG)n	Simple_repeat	1	46	(0)	2101707
12	17.5	3.1	0.0	chr2	130356676	130356707	(111836822)	+	(TCCGCG)n	Simple_repeat	1	33	(0)	2101708
299	30.6	10.5	0.7	chr2	130356708	130356864	(111836665)	+	MIRb	SINE/MIR	55	236	(32)	2101709
23	17.1	5.7	0.0	chr2	144515739	144515791	(97677738)	+	(CA)n	Simple_repeat	1	56	(0)	2121491
21	0.0	0.0	0.0	chr2	144515798	144515820	(97677709)	+	(AG)n	Simple_repeat	1	23	(0)	2121492
15	0.0	0.0	0.0	chr2	144517172	144517190	(97676339)	+	(CGC)n	Simple_repeat	1	19	(0)	2121496
24	19.7	1.9	0.0	chr2	144583960	144584011	(97609518)	+	(TG)n	Simple_repeat	1	53	(0)	2121601
17	25.9	0.0	4.6	chr2	144584012	144584076	(97609453)	+	G-rich	Low_complexity	1	65	(0)	2121602
12	9.1	4.2	0.0	chr2	145288687	145288710	(96904819)	+	(AGAA)n	Simple_repeat	1	25	(0)	2122486
1519	14.5	9.6	2.7	chr2	151775449	151775740	(90417789)	C	AluJr	SINE/Alu	(0)	312	1	2131332
1715	17.1	1.9	3.2	chr2	151790682	151790996	(90402533)	C	AluJb	SINE/Alu	(1)	311	1	2131362
15	24.1	1.4	6.8	chr2	151828341	151828412	(90365117)	+	(GCC)n	Simple_repeat	1	73	(0)	2131422
3891	13.0	1.2	0.2	chr2	152583288	152583874	(89609655)	C	MER41E	LTR/ERV1	(0)	595	3	2132648
657	1.4	0.0	0.0	chr2	156401147	156401217	(85792312)	C	tRNA-Gly-GGY	tRNA	(3)	71	1	2137396
23	32.0	0.0	2.2	chr2	157876292	157876383	(84317146)	+	GA-rich	Low_complexity	1	92	(0)	2139335
2395	21.0	9.3	2.5	chr2	159134926	159135548	(83057981)	C	L1MB8	LINE/L1	(0)	6178	5514	2141173
226	12.1	0.0	0.0	chr2	161265953	161265985	(80927544)	+	Eulor9C	DNA	45	77	(193)	2144177
20	0.0	0.0	0.0	chr2	169799279	169799300	(72394229)	+	(T)n	Simple_repeat	1	22	(0)	2155629
16	11.2	0.0	3.2	chr2	169827510	169827540	(72365989)	+	(GGC)n	Simple_repeat	1	31	(0)	2155681
27	20.3	1.1	6.5	chr2	169827686	169827776	(72365753)	+	(GCG)n	Simple_repeat	1	92	(0)	2155682
3724	8.5	6.2	0.2	chr2	169839868	169840412	(72353117)	C	LTR19B	LTR/ERV1	(0)	580	1	2155717
6104	21.6	8.1	6.6	chr2	169840413	169841348	(72352181)	C	MLT1A1-int	LTR/ERVL-MaLR	(439)	1296	377	2155714
5953	13.0	5.4	3.3	chr2	170263304	170264250	(71929279)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	2156370
13	18.6	3.7	5.4	chr2	170715346	170715399	(71478130)	+	G-rich	Low_complexity	1	56	(0)	2157104
772	29.9	7.2	1.8	chr2	170928043	170928433	(71265096)	C	L1MC5a	LINE/L1	(299)	2478	2065	2157500
2292	10.8	0.3	0.7	chr2	171137568	171137874	(71055655)	+	AluSx3	SINE/Alu	2	307	(4)	2157859
14	20.2	4.3	2.0	chr2	173354872	173354918	(68838611)	+	(GCT)n	Simple_repeat	1	49	(0)	2161545
26401	2.5	0.1	0.0	chr2	173527290	173533317	(68660212)	C	L1PA3	LINE/L1	(0)	6155	127	2161822
19	25.0	1.2	5.8	chr2	173963715	173963799	(68229730)	+	(GGCGGC)n	Simple_repeat	1	86	(0)	2162453
13	7.8	3.5	3.3	chr2	173965000	173965028	(68228501)	+	(GGAGG)n	Simple_repeat	1	30	(0)	2162463
23	17.3	0.0	5.2	chr2	173965080	173965137	(68228392)	+	(CGG)n	Simple_repeat	1	58	(0)	2162464
13	21.7	0.0	2.6	chr2	173965232	173965270	(68228259)	+	(GGCGGC)n	Simple_repeat	1	39	(0)	2162465
1357	23.6	1.9	2.1	chr2	174059504	174059876	(68133653)	+	MER74B	LTR/ERVL	193	564	(58)	2162649
1815	15.5	4.1	0.3	chr2	174060035	174060318	(68133211)	+	AluJo	SINE/Alu	3	297	(15)	2162650
24	3.1	2.9	2.8	chr2	175171157	175171191	(67022338)	+	(GT)n	Simple_repeat	1	36	(0)	2164416
26438	2.4	0.3	0.2	chr2	175588547	175594563	(66598966)	C	L1PA2	LINE/L1	(0)	6155	130	2165003
449	28.4	5.1	4.8	chr2	175594569	175594901	(66598628)	+	L1MC4a	LINE/L1	5687	5901	(1981)	2165004
18	17.8	2.2	2.1	chr2	178072727	178072772	(64120757)	+	(GCT)n	Simple_repeat	1	47	(0)	2168498
600	31.3	7.7	1.8	chr2	181962533	181962861	(60230668)	+	HAL1ME	LINE/L1	246	595	(1870)	2173354
2342	11.6	0.0	0.3	chr2	182994356	182994666	(59198863)	+	AluSz	SINE/Alu	1	310	(2)	2174748
466	27.0	14.0	7.3	chr2	182994667	182994758	(59198771)	+	MIRb	SINE/MIR	156	237	(31)	2174747
704	33.3	7.8	4.6	chr2	190271590	190271948	(51921581)	+	L2	LINE/L2	2681	3062	(357)	2184077
487	31.4	10.5	5.9	chr2	190271954	190272302	(51921227)	+	L2b	LINE/L2	3010	3376	(11)	2184079
777	28.1	19.8	1.7	chr2	190379023	190379439	(51814090)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	2	2184272
28	3.3	0.0	0.0	chr2	190534906	190534936	(51658593)	+	(CGGCCT)n	Simple_repeat	1	31	(0)	2184502
14	13.8	0.0	5.6	chr2	191020468	191020503	(51173026)	+	(GCAGGC)n	Simple_repeat	1	36	(0)	2185241
539	23.5	12.6	0.5	chr2	197477721	197477908	(44715621)	C	MIR	SINE/MIR	(28)	234	21	2194120
1311	16.1	18.0	3.4	chr2	197477956	197478276	(44715253)	C	LTR47A	LTR/ERVL	(2)	450	73	2194121
890	23.1	16.3	7.8	chr2	197943433	197944116	(44249413)	C	HAL1	LINE/L1	(113)	2394	1641	2194819
16	21.9	1.2	8.5	chr2	230411968	230412048	(11781481)	+	G-rich	Low_complexity	1	82	(0)	2245094
2230	11.9	0.3	0.0	chr2	231570775	231571077	(10622452)	C	AluSx	SINE/Alu	(8)	304	1	2247162
4799	14.9	2.3	3.7	chr2	231571078	231571231	(10622298)	C	MER4D	LTR/ERV1	(298)	605	470	2247160
2284	10.8	0.0	0.0	chr2	231571232	231571528	(10622001)	C	AluSq	SINE/Alu	(16)	297	1	2247163
13	11.0	9.8	2.2	chr2	231662447	231662487	(10531042)	+	(CCGCT)n	Simple_repeat	1	45	(0)	2247398
27	19.5	1.5	1.5	chr2	236167745	236167810	(6025719)	+	(GGC)n	Simple_repeat	1	67	(0)	2254615
90	2.2	1.1	0.0	chr2	237923933	237924024	(4269505)	+	(TCTTT)n	Simple_repeat	1	93	(0)	2257054
23	21.8	0.0	5.3	chr2	238158847	238158865	(4034664)	+	(CTCCCC)n	Simple_repeat	5	76	(0)	2257430
15	14.9	0.0	7.0	chr2	238158885	238158927	(4034602)	+	G-rich	Low_complexity	1	43	(0)	2257431
18	19.3	2.4	9.2	chr2	238158997	238159081	(4034448)	+	(CCG)n	Simple_repeat	1	87	(0)	2257432
12	15.9	5.7	0.0	chr2	238159212	238159246	(4034283)	+	(CGCCCG)n	Simple_repeat	1	37	(0)	2257433
2461	5.7	1.0	0.0	chr2	241687524	241687823	(505706)	C	AluSc8	SINE/Alu	(8)	303	1	2261545
13	24.2	1.9	3.8	chr20	324509	324560	(64119607)	+	(CGCCC)n	Simple_repeat	1	53	(0)	2262662
2118	10.3	2.1	0.0	chr20	372543	372823	(64071344)	+	AluSz	SINE/Alu	1	287	(25)	2262787
609	27.5	2.5	3.0	chr20	372824	372972	(64071195)	+	MIRb	SINE/MIR	71	218	(50)	2262786
2671	3.0	0.3	0.0	chr20	380405	380708	(64063459)	+	AluY	SINE/Alu	1	305	(6)	2262813
272	30.8	5.7	4.1	chr20	380709	380745	(64063422)	C	MIRb	SINE/MIR	(163)	105	73	2262812
3378	23.7	1.9	5.8	chr20	1434405	1434915	(63009252)	+	L1ME1	LINE/L1	5653	6154	(25)	2264995
3002	12.3	11.7	0.0	chr20	1434987	1435464	(63008703)	+	MER66C	LTR/ERV1	1	541	(14)	2264998
609	25.9	18.4	1.0	chr20	3174958	3175370	(61268797)	C	L1M6	LINE/L1	(658)	2017	1421	2268351
12	13.5	0.0	7.9	chr20	3797582	3797619	(60646548)	+	(TTTCCC)n	Simple_repeat	1	38	(0)	2269518
330	26.1	7.3	1.7	chr20	5077845	5077961	(59366206)	C	L2a	LINE/L2	(95)	3331	3208	2271956
999	17.6	0.0	4.5	chr20	5078151	5078328	(59365839)	+	MER45A	DNA/hAT-Tip100	8	177	(1)	2271960
395	20.8	8.9	5.9	chr20	17965188	17965340	(46478827)	+	MER20	DNA/hAT-Charlie	58	215	(4)	2291815
24	25.8	0.0	2.6	chr20	30290568	30290644	(34153523)	+	G-rich	Low_complexity	1	77	(0)	2304833
2080	8.2	9.2	1.4	chr20	31503372	31503653	(32940514)	+	AluSx	SINE/Alu	7	312	(0)	2306127
361	32.2	8.4	6.8	chr20	31503697	31503989	(32940178)	+	L2c	LINE/L2	2500	2797	(622)	2306128
1002	25.5	0.9	0.9	chr20	31676226	31676447	(32767720)	C	MIR	SINE/MIR	(24)	238	17	2306602
2003	13.8	0.0	2.8	chr20	31709870	31709985	(32734182)	C	AluSx1	SINE/Alu	(203)	109	1	2306688
565	26.1	7.2	0.0	chr20	31710110	31710251	(32733916)	C	L2a	LINE/L2	(2)	3424	3272	2306690
185	28.1	0.0	3.4	chr20	32752670	32752728	(31691439)	C	L2b	LINE/L2	(818)	2601	2545	2309200
359	30.6	0.9	0.0	chr20	32752750	32752857	(31691310)	C	MIR3	SINE/MIR	(62)	146	38	2309201
12	15.9	5.7	0.0	chr20	32762320	32762354	(31681813)	+	G-rich	Low_complexity	1	37	(0)	2309235
12	24.6	0.0	2.5	chr20	32762485	32762524	(31681643)	+	G-rich	Low_complexity	1	40	(0)	2309236
384	26.7	17.3	1.9	chr20	34302395	34302604	(30141563)	+	MIR	SINE/MIR	10	258	(4)	2312722
2375	11.0	0.3	0.0	chr20	35120588	35120896	(29323271)	C	AluSx	SINE/Alu	(2)	310	1	2314565
3793	12.8	0.0	0.2	chr20	35121029	35121558	(29322609)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	2314566
1848	4.8	0.0	1.7	chr20	35447050	35447281	(28996886)	C	L1PA5	LINE/L1	(0)	6154	5927	2315295
302	5.4	0.0	0.0	chr20	35447283	35447319	(28996848)	+	L1PA5	LINE/L1	5912	5948	(206)	2315295
412	30.0	17.6	0.5	chr20	35699929	35700139	(28744028)	+	MIR	SINE/MIR	8	262	(0)	2315847
12	17.6	5.0	2.4	chr20	36605904	36605943	(27838224)	+	(GGCCC)n	Simple_repeat	1	42	(0)	2318000
416	32.2	6.8	1.0	chr20	38460381	38460587	(25983580)	+	MamGypLTR1a	LTR/Gypsy	555	774	(10)	2322218
8777	1.9	1.4	29.6	chr20	38460665	38462605	(25981562)	C	SVA_D	Retroposon/SVA	(0)	1386	1	2322219
18	23.8	0.0	2.0	chr20	38926649	38926699	(25517468)	+	(GCG)n	Simple_repeat	1	51	(0)	2323167
226	26.0	0.0	0.0	chr20	40991042	40991102	(23453065)	C	L2c	LINE/L2	(60)	3327	3256	2326841
16	26.6	2.0	1.9	chr20	43458260	43458310	(20985857)	+	(GC)n	Simple_repeat	1	52	(0)	2331218
2207	12.5	0.0	0.7	chr20	43575181	43575483	(20868684)	+	AluSx1	SINE/Alu	1	301	(11)	2331458
33	26.3	0.0	0.0	chr20	44885718	44885803	(19558364)	+	(CCG)n	Simple_repeat	1	86	(0)	2334595
387	28.6	4.3	0.0	chr20	45881480	45881591	(18562576)	+	MIRc	SINE/MIR	40	156	(112)	2336465
351	24.0	0.0	0.0	chr20	45881669	45881757	(18562410)	C	MIRc	SINE/MIR	(98)	164	76	2336466
190	28.9	3.7	0.0	chr20	46681216	46681267	(17762900)	C	MIR3	SINE/MIR	(15)	193	140	2338205
239	20.0	1.8	1.8	chr20	46681283	46681338	(17762829)	+	L2b	LINE/L2	3320	3375	(0)	2338206
26	31.8	2.8	4.0	chr20	46681350	46681385	(17762782)	+	G-rich	Low_complexity	1	147	(0)	2338207
25	19.9	5.6	5.3	chr20	46681386	46681492	(17762675)	+	GA-rich	Low_complexity	1	113	(0)	2338208
12	13.9	0.0	0.0	chr20	47359222	47359245	(17084922)	+	(CCTC)n	Simple_repeat	1	24	(0)	2339810
610	30.1	0.6	0.0	chr20	49047115	49047297	(15396870)	+	MIR	SINE/MIR	12	195	(67)	2343479
1172	28.8	13.8	3.3	chr20	49811496	49812173	(14631994)	C	L2a	LINE/L2	(0)	3426	2665	2345408
229	32.1	1.2	0.0	chr20	49812243	49812323	(14631844)	+	L2a	LINE/L2	3344	3425	(1)	2345407
191	32.3	1.6	0.0	chr20	49915961	49916022	(14528145)	C	MIRc	SINE/MIR	(119)	149	87	2345602
579	17.4	0.9	0.9	chr20	49916080	49916189	(14527978)	+	MIRc	SINE/MIR	47	156	(112)	2345603
1208	26.0	17.1	1.1	chr20	50097896	50098642	(14345525)	C	L2a	LINE/L2	(0)	3426	2522	2346076
320	25.0	14.5	5.3	chr20	50113488	50113618	(14330549)	C	MIRb	SINE/MIR	(71)	197	53	2346106
2472	12.2	6.6	0.2	chr20	50482541	50482952	(13961215)	+	LTR47A	LTR/ERVL	13	452	(0)	2347064
296	18.2	0.0	0.0	chr20	50482956	50483010	(13961157)	C	LTR16C	LTR/ERVL	(249)	240	186	2347063
774	27.6	11.6	1.4	chr20	50788258	50788544	(13655623)	+	MER46C	DNA/TcMar-Tigger	9	328	(10)	2347736
239	17.4	0.0	0.0	chr20	50958126	50958171	(13485996)	C	MLT1O	LTR/ERVL-MaLR	(75)	467	422	2348089
1085	20.1	6.4	4.0	chr20	51887965	51888178	(12555989)	+	MER58B	DNA/hAT-Charlie	119	341	(0)	2350175
438	27.3	12.8	1.0	chr20	53622510	53622716	(10821451)	C	MIRc	SINE/MIR	(8)	260	26	2353883
598	26.9	1.6	3.1	chr20	53750615	53750796	(10693371)	+	MER46C	DNA/TcMar-Tigger	155	334	(4)	2354257
187	29.1	13.4	0.0	chr20	53750818	53750920	(10693247)	C	MIR	SINE/MIR	(136)	126	8	2354258
19	7.3	3.5	0.0	chr20	53751106	53751134	(10693033)	+	(AC)n	Simple_repeat	1	30	(0)	2354259
32	0.0	0.0	0.0	chr20	62359473	62359502	(2084665)	+	(GGGCCTG)n	Simple_repeat	1	30	(0)	2368459
848	11.6	3.7	0.0	chr20	63019379	63019507	(1424660)	C	AluJb	SINE/Alu	(178)	134	1	2369200
1052	24.8	7.5	2.1	chr20	63019521	63020000	(1424167)	C	L1MEg	LINE/L1	(4507)	2595	1895	2369196
11	24.1	0.0	0.0	chr20	63740465	63740498	(703669)	+	(GGACGG)n	Simple_repeat	1	34	(0)	2369965
193	21.2	0.0	0.0	chr20	63846951	63847337	(596830)	+	(CA)n	Simple_repeat	1	387	(0)	2370123
3679	16.1	0.8	0.8	chr21	8815385	8816049	(37893934)	+	TAR1	Satellite/telo	1404	2068	(43)	2374003
18	18.5	0.0	2.6	chr21	21161684	21161722	(25548261)	+	(AT)n	Simple_repeat	1	39	(0)	2386656
427	33.9	4.5	0.0	chr21	25733664	25733831	(20976152)	C	MIRc	SINE/MIR	(13)	255	80	2392950
291	37.5	3.8	4.1	chr21	29656797	29657103	(17052880)	+	X6B_LINE	LINE/CR1	759	1065	(7)	2398649
14	22.1	2.0	3.9	chr21	32727802	32727852	(13982131)	+	(CTCCCG)n	Simple_repeat	1	52	(0)	2403671
488	23.8	1.0	0.0	chr21	33383190	33383290	(13326693)	+	MER81	DNA/hAT-Blackjack	2	103	(11)	2404845
15	19.3	6.4	0.0	chr21	33588418	33588464	(13121519)	+	(GCC)n	Simple_repeat	1	50	(0)	2405243
765	22.2	4.8	19.5	chr21	35201042	35201410	(11508573)	C	L2a	LINE/L2	(0)	3426	3115	2407761
221	29.2	9.6	2.6	chr21	36298130	36298245	(10411738)	C	MIRb	SINE/MIR	(37)	231	107	2409558
22	21.7	9.1	0.0	chr21	36321672	36321748	(10388235)	+	(TC)n	Simple_repeat	1	84	(0)	2409610
334	33.9	6.7	2.6	chr21	36429857	36429884	(10280099)	C	L3	LINE/CR1	(233)	3866	3833	2409864
27	23.2	0.0	0.0	chr21	37366986	37367047	(9342936)	+	(GCT)n	Simple_repeat	1	62	(0)	2411470
22	19.3	6.1	3.5	chr21	37367295	37367376	(9342607)	+	(GCC)n	Simple_repeat	1	87	(0)	2411471
518	18.8	6.5	0.0	chr21	37450893	37450993	(9258990)	+	Tigger3c	DNA/TcMar-Tigger	1	108	(494)	2411620
2456	15.4	12.5	1.7	chr21	37450985	37451345	(9258638)	+	Tigger3	DNA/TcMar-Tigger	2278	2677	(352)	2411621
2035	18.1	2.3	6.1	chr21	38120890	38120935	(8589048)	C	MLT2C1	LTR/ERVL	(352)	45	3	2412609
15	0.0	0.0	0.0	chr21	38120985	38121001	(8588982)	+	(AC)n	Simple_repeat	1	17	(0)	2412611
677	16.3	3.6	1.5	chr21	38121047	38121183	(8588800)	C	LTR16A	LTR/ERVL	(8)	443	304	2412612
2018	19.8	3.8	0.7	chr21	38121187	38121599	(8588384)	C	LTR9	LTR/ERV1	(0)	612	187	2412613
200	27.5	5.9	1.2	chr21	38804426	38804506	(7905477)	C	X7B_LINE	LINE/CR1	(23)	227	143	2413541
18	18.4	2.3	0.0	chr21	39348737	39348779	(7361204)	+	(CGCC)n	Simple_repeat	1	44	(0)	2414409
15	22.4	4.9	3.1	chr21	39348838	39348898	(7361085)	+	(GCG)n	Simple_repeat	1	64	(0)	2414410
2204	21.5	3.8	3.9	chr21	41932055	41932664	(4777319)	+	MER21C	LTR/ERVL	297	905	(33)	2418185
21	19.7	3.3	1.6	chr21	41954023	41954082	(4755901)	+	G-rich	Low_complexity	1	62	(0)	2418219
16	24.7	0.0	0.0	chr21	41954290	41954324	(4755659)	+	(GT)n	Simple_repeat	1	35	(0)	2418220
224	20.4	7.5	1.7	chr21	41954536	41955391	(4754592)	+	(GT)n	Simple_repeat	1	905	(0)	2418221
8795	13.3	10.0	2.6	chr21	42976090	42977537	(3732446)	C	Tigger1	DNA/TcMar-Tigger	(0)	2418	814	2419665
1168	17.9	10.4	0.9	chr21	43775666	43776004	(2933979)	+	MER31A	LTR/ERV1	1	375	(110)	2420778
64	25.4	6.8	0.0	chr21	43884549	43884799	(2825184)	+	G-rich	Low_complexity	1	268	(0)	2420983
20	3.1	6.1	0.0	chr21	45073746	45073778	(1636205)	+	(AAAC)n	Simple_repeat	1	35	(0)	2422492
225	31.5	5.3	2.7	chr21	46323406	46323552	(386431)	C	MER4E	LTR/ERV1	(153)	613	463	2423810
235	22.1	3.4	5.5	chr21	46323663	46323753	(386230)	+	LTR16A	LTR/ERVL	135	223	(228)	2423811
12	7.5	6.7	3.1	chr21	46324785	46324814	(385169)	+	(GCGCGG)n	Simple_repeat	1	32	(0)	2423813
1305	29.1	5.9	7.5	chr21	46455558	46456078	(253905)	+	MLT1G3	LTR/ERVL-MaLR	75	586	(9)	2423973
567	21.8	19.4	8.0	chr21	46456087	46456265	(253718)	C	ERV3-16A3_I-int	LTR/ERVL	(4170)	1056	842	2423961
1961	14.7	9.5	8.1	chr21	46456266	46456723	(253260)	+	MLT1C	LTR/ERVL-MaLR	1	465	(2)	2423974
617	16.4	15.8	7.1	chr21	46634904	46635087	(74896)	C	MER4B	LTR/ERV1	(399)	211	9	2424208
12	17.7	1.2	13.1	chr21	46635981	46636063	(73920)	+	(CGCCCA)n	Simple_repeat	1	84	(0)	2424209
335	31.7	11.1	6.3	chr22	16534338	16534958	(34283510)	+	L1MC4	LINE/L1	916	1368	(1121)	2427474
44	14.2	8.5	0.8	chr22	16534959	16535076	(34283392)	+	(TGAGA)n	Simple_repeat	1	128	(0)	2427475
21	16.0	4.1	0.0	chr22	16601252	16601300	(34217168)	+	(CCGGAG)n	Simple_repeat	1	51	(0)	2427582
822	22.0	15.3	2.9	chr22	17628986	17629083	(33189385)	C	L1MC3	LINE/L1	(340)	7655	7516	2429398
834	15.0	1.5	0.0	chr22	17629084	17629216	(33189252)	+	FLAM_C	SINE/Alu	1	135	(8)	2429399
1176	18.4	0.9	1.9	chr22	17629217	17629440	(33189028)	C	L1MC3	LINE/L1	(480)	7515	7072	2429398
1219	27.1	10.2	4.9	chr22	17916199	17916874	(32901594)	+	L2a	LINE/L2	1578	2293	(1126)	2429882
3632	23.5	6.7	4.4	chr22	19044617	19045255	(31773213)	C	L1MD	LINE/L1	(652)	5527	4859	2431347
827	10.3	0.8	0.0	chr22	19045256	19045372	(31773096)	+	HY1	scRNA	1	118	(1)	2431348
3632	24.9	5.6	5.2	chr22	19045373	19045597	(31772871)	C	L1MD	LINE/L1	(1288)	4858	4652	2431347
19	18.5	6.3	1.5	chr22	19122417	19122479	(31695989)	+	(GCCGC)n	Simple_repeat	1	67	(0)	2431480
188	29.1	0.0	6.4	chr22	19144141	19144250	(31674218)	+	L2c	LINE/L2	3015	3117	(270)	2431499
15	4.8	0.0	0.0	chr22	19291658	19291679	(31526789)	+	(CGG)n	Simple_repeat	1	22	(0)	2431742
3891	19.5	2.2	2.1	chr22	19299895	19300485	(31517983)	+	PRIMAX-int	LTR/ERV1	518	1121	(6492)	2431757
2405	8.5	0.0	1.3	chr22	19300486	19300802	(31517666)	+	AluSp	SINE/Alu	1	313	(0)	2431759
633	28.8	16.1	2.3	chr22	19380924	19382112	(31436356)	C	L1ME4b	LINE/L1	(1487)	4659	3247	2431901
660	23.9	12.3	4.8	chr22	19393656	19393886	(31424582)	C	Charlie15b	DNA/hAT-Charlie	(136)	925	657	2431922
1082	16.6	0.6	0.0	chr22	19446707	19446869	(31371599)	C	AluJr	SINE/Alu	(15)	297	134	2432023
17	11.7	5.8	5.5	chr22	19447536	19447587	(31370881)	+	(GGC)n	Simple_repeat	1	55	(0)	2432024
2306	10.3	0.0	0.6	chr22	19586449	19586760	(31231708)	+	AluSz	SINE/Alu	1	310	(2)	2432269
4727	12.0	3.0	7.0	chr22	19586761	19587377	(31231091)	C	LTR1A2	LTR/ERV1	(251)	586	7	2432268
3251	25.2	7.0	4.8	chr22	19595132	19595547	(31222921)	+	L1MEc	LINE/L1	4644	5037	(1282)	2432282
2204	9.4	0.0	0.7	chr22	19628880	19629178	(31189290)	+	AluSx1	SINE/Alu	3	299	(13)	2432344
1088	14.4	4.9	6.7	chr22	19629179	19629267	(31189201)	C	L1MA4	LINE/L1	(185)	6115	6038	2432343
1652	8.6	0.9	2.3	chr22	19712695	19712942	(31105526)	C	AluSc8	SINE/Alu	(0)	311	65	2432472
627	28.1	8.9	0.0	chr22	19712947	19713170	(31105298)	+	MER46C	DNA/TcMar-Tigger	7	252	(86)	2432473
13	11.2	3.2	3.1	chr22	19723472	19723502	(31094966)	+	G-rich	Low_complexity	1	32	(0)	2432483
1781	26.9	13.3	10.2	chr22	19814005	19814306	(31004162)	+	L1MD3	LINE/L1	6889	7228	(767)	2432559
633	12.6	0.0	0.0	chr22	19814307	19814393	(31004075)	C	FLAM_A	SINE/Alu	(33)	109	23	2432562
1781	26.9	13.3	10.2	chr22	19814394	19814789	(31003679)	+	L1MD3	LINE/L1	7229	7677	(318)	2432559
1781	26.9	13.3	10.2	chr22	19815058	19815179	(31003289)	+	L1MD3	LINE/L1	7678	7814	(181)	2432559
18	6.3	5.9	0.0	chr22	19815222	19815255	(31003213)	+	(GTGCGGT)n	Simple_repeat	1	36	(0)	2432564
255	7.3	6.4	1.1	chr22	19909490	19910005	(30908463)	+	(AC)n	Simple_repeat	1	549	(0)	2432668
1792	12.3	2.4	5.8	chr22	19958600	19958908	(30859560)	+	AluJo	SINE/Alu	2	299	(13)	2432752
2496	7.0	0.0	0.0	chr22	20006632	20006929	(30811539)	C	AluSc	SINE/Alu	(11)	298	1	2432783
1041	14.5	0.0	0.0	chr22	20006972	20007116	(30811352)	+	AluJo	SINE/Alu	1	145	(167)	2432784
241	36.2	6.0	9.9	chr22	20008349	20008590	(30809878)	+	L2a	LINE/L2	3149	3403	(23)	2432787
1311	21.5	2.7	1.3	chr22	20058033	20058357	(30760111)	C	L1MB8	LINE/L1	(0)	6178	5850	2432853
2456	8.5	0.0	0.0	chr22	20058361	20058665	(30759803)	+	AluY	SINE/Alu	1	305	(6)	2432854
1918	20.9	4.6	5.6	chr22	20059275	20059960	(30758508)	C	L1MB8	LINE/L1	(418)	5766	4993	2432853
1737	15.5	1.4	3.4	chr22	20059961	20060068	(30758400)	C	AluJb	SINE/Alu	(17)	295	188	2432856
2574	5.9	0.0	0.0	chr22	20060069	20060372	(30758096)	+	AluY	SINE/Alu	2	305	(6)	2432857
1737	15.5	1.4	3.4	chr22	20060373	20060554	(30757914)	C	AluJb	SINE/Alu	(125)	187	11	2432856
907	17.4	2.8	9.8	chr22	20060555	20060631	(30757837)	C	L1MB8	LINE/L1	(1154)	4992	4924	2432853
14	18.7	2.2	4.3	chr22	20117136	20117181	(30701287)	+	(CCGC)n	Simple_repeat	1	47	(0)	2432924
293	23.5	17.6	6.8	chr22	20118560	20118705	(30699763)	C	MIRb	SINE/MIR	(15)	253	89	2432927
2154	14.5	2.4	0.0	chr22	20128305	20128635	(30689833)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	2432938
596	25.1	7.3	2.4	chr22	20317601	20317808	(30500660)	+	L1MC4	LINE/L1	6794	7012	(1030)	2433103
983	24.2	10.0	4.2	chr22	20321742	20322171	(30496297)	C	LTR56	LTR/ERV1	(0)	445	11	2433111
1745	17.0	0.6	4.3	chr22	20417255	20417578	(30400890)	C	AluSz6	SINE/Alu	(0)	312	1	2433279
330	23.7	0.3	0.0	chr22	20417579	20417666	(30400802)	C	L1MB3	LINE/L1	(215)	5959	5871	2433280
2313	9.4	0.0	0.3	chr22	20417806	20418103	(30400365)	+	AluSz	SINE/Alu	1	297	(15)	2433281
517	5.9	0.0	0.0	chr22	20484156	20484223	(30334245)	C	AluSx	SINE/Alu	(175)	137	70	2433402
13432	12.7	2.5	2.1	chr22	20677402	20677910	(30140558)	C	L1PB	LINE/L1	(2693)	3453	2918	2433724
2108	14.9	0.0	0.0	chr22	21056221	21056516	(29761952)	+	AluSz	SINE/Alu	2	297	(15)	2434468
53	0.0	0.0	0.0	chr22	21056597	21056641	(29761827)	+	(CA)n	Simple_repeat	1	45	(0)	2434469
13	16.2	2.7	2.6	chr22	21682982	21683018	(29135450)	+	(CCCTGC)n	Simple_repeat	1	38	(0)	2435685
220	38.3	1.1	0.0	chr22	21911266	21911359	(28907109)	C	MIRc	SINE/MIR	(116)	152	58	2436204
2335	10.1	0.0	0.0	chr22	21911396	21911692	(28906776)	+	AluSc8	SINE/Alu	1	297	(14)	2436205
1818	27.3	5.4	7.5	chr22	22740243	22741222	(28077246)	+	L1MEc	LINE/L1	558	1519	(4881)	2437329
1252	15.8	1.5	0.0	chr22	26573129	26573330	(24245138)	C	AluJo	SINE/Alu	(107)	205	1	2444648
2235	11.9	0.0	0.0	chr22	29590244	29590553	(21227915)	+	AluSg	SINE/Alu	1	310	(0)	2450935
1539	14.8	5.2	10.2	chr22	29954061	29954385	(20864083)	C	AluJo	SINE/Alu	(0)	312	5	2451707
14	23.1	0.0	6.9	chr22	38455963	38456020	(12362448)	+	(CCGC)n	Simple_repeat	1	58	(0)	2469535
13	13.1	2.7	5.3	chr22	38456052	38456088	(12362380)	+	G-rich	Low_complexity	1	38	(0)	2469536
1205	15.8	7.3	0.0	chr22	39961226	39961427	(10857041)	C	MER39	LTR/ERV1	(489)	218	1	2472596
299	24.4	18.6	14.5	chr22	39961241	39961364	(10857104)	C	MER21A	LTR/ERVL	(642)	289	101	2472597
382	34.4	9.7	3.1	chr22	40043850	40044071	(10774397)	+	MIRb	SINE/MIR	5	242	(26)	2472774
369	29.6	5.8	3.0	chr22	40182901	40183106	(10635362)	+	L2a	LINE/L2	3180	3413	(13)	2473085
219	24.8	14.6	1.9	chr22	40183145	40183251	(10635217)	+	MIRb	SINE/MIR	123	245	(23)	2473086
204	30.6	1.8	4.4	chr22	41845930	41846042	(8972426)	C	L2c	LINE/L2	(243)	3144	3035	2476908
389	28.3	7.0	0.0	chr22	41846163	41846282	(8972186)	C	MLT1N2	LTR/ERVL-MaLR	(2)	560	432	2476909
19	9.8	0.0	2.9	chr22	43862019	43862053	(6956415)	+	(CCCCA)n	Simple_repeat	1	35	(0)	2480889
16	22.9	9.2	0.0	chr22	43862134	43862209	(6956259)	+	G-rich	Low_complexity	1	83	(0)	2480890
283	28.1	6.5	4.2	chr22	43956228	43956346	(6862122)	C	MIR3	SINE/MIR	(82)	126	5	2481088
2448	14.0	6.7	3.1	chr22	43956508	43956964	(6861504)	C	LTR26C	LTR/ERV1	(0)	539	65	2481089
223	31.7	3.7	0.0	chr22	46122429	46122532	(4695936)	+	MIR1_Amn	SINE/MIR	30	137	(93)	2485022
325	34.8	4.8	0.6	chr22	46297583	46297761	(4520707)	+	L2a	LINE/L2	3236	3422	(4)	2485328
488	29.8	1.7	1.1	chr22	46297766	46297945	(4520523)	C	L1M5	LINE/L1	(2360)	3786	3606	2485329
236	7.6	8.0	3.6	chr22	49975367	49975881	(842587)	+	(GT)n	Simple_repeat	1	537	(0)	2490011
546	21.8	29.2	4.0	chr22	50342271	50342602	(475866)	C	LTR41	LTR/ERVL	(308)	460	5	2490487
12	23.6	0.0	0.0	chr3	3126957	3126991	(195168568)	+	(GGCGGC)n	Simple_repeat	1	35	(0)	2496960
305	32.5	7.4	3.5	chr3	3189654	3189822	(195105737)	+	L2c	LINE/L2	3208	3383	(4)	2497047
184	28.1	9.5	0.0	chr3	4493834	4493890	(193801669)	C	OldhAT1	DNA/hAT-Ac	(1409)	1439	1377	2499110
30	0.0	0.0	0.0	chr3	4831107	4831132	(193464427)	+	(TC)n	Simple_repeat	1	26	(0)	2499647
21	4.0	0.0	0.0	chr3	4831133	4831158	(193464401)	+	(AC)n	Simple_repeat	1	26	(0)	2499648
16	17.1	0.0	0.0	chr3	4831159	4831186	(193464373)	+	(CTCT)n	Simple_repeat	1	54	(0)	2499649
213	26.0	8.0	6.3	chr3	4978009	4978119	(193317440)	+	L2c	LINE/L2	3273	3385	(2)	2499892
27326	2.8	0.1	0.0	chr3	6484912	6490929	(191804630)	C	L1PA2	LINE/L1	(2)	6153	127	2502333
30	26.0	0.0	2.3	chr3	9731741	9731827	(188563732)	+	(CGC)n	Simple_repeat	1	87	(0)	2507838
2235	12.0	0.0	0.0	chr3	9980015	9980313	(188315246)	C	AluSx	SINE/Alu	(13)	299	1	2508397
1892	14.7	0.0	6.9	chr3	9980369	9980687	(188314872)	C	AluJb	SINE/Alu	(15)	297	1	2508398
1668	10.0	0.7	14.5	chr3	13418456	13418814	(184876745)	+	AluSq2	SINE/Alu	2	310	(3)	2515199
2094	9.1	3.2	2.6	chr3	13418815	13418977	(184876582)	+	AluSz	SINE/Alu	142	311	(1)	2515198
2793	15.9	0.4	6.1	chr3	13435817	13436326	(184859233)	+	L1M4	LINE/L1	5332	5822	(362)	2515234
1542	14.6	7.5	0.0	chr3	13436329	13436575	(184858984)	+	AluJo	SINE/Alu	1	267	(45)	2515237
17	29.9	0.0	0.0	chr3	13650691	13650747	(184644812)	+	(GCGGT)n	Simple_repeat	1	57	(0)	2515681
14	15.4	6.7	2.1	chr3	13650739	13650783	(184644776)	+	(GGCCA)n	Simple_repeat	1	48	(0)	2515682
343	20.9	10.8	3.4	chr3	13650819	13650937	(184644622)	+	Charlie4a	DNA/hAT-Charlie	25	153	(355)	2515683
328	30.9	4.7	0.0	chr3	14232962	14233084	(184062475)	+	L3	LINE/CR1	3898	4026	(73)	2516500
1959	14.1	0.3	0.7	chr3	14233100	14233383	(184062176)	+	AluSz6	SINE/Alu	1	283	(29)	2516501
2157	10.2	0.0	0.0	chr3	14408332	14408605	(183886954)	C	AluSz	SINE/Alu	(9)	303	30	2516895
319	25.5	11.9	5.4	chr3	14408620	14408768	(183886791)	C	L1M5	LINE/L1	(3111)	3035	2876	2516896
2531	6.7	0.0	0.6	chr3	14408796	14409107	(183886452)	C	AluY	SINE/Alu	(1)	310	1	2516897
33	0.0	0.0	0.0	chr3	17741801	17741831	(180553728)	+	(T)n	Simple_repeat	1	31	(0)	2522302
17270	2.6	0.0	0.0	chr3	17858275	17861391	(180434168)	C	L1HS	LINE/L1	(2902)	3244	127	2522495
18	17.9	0.0	0.0	chr3	20039916	20039954	(178255605)	+	(CCCCCA)n	Simple_repeat	1	39	(0)	2525554
14	9.6	0.0	0.0	chr3	20040191	20040213	(178255346)	+	(GGC)n	Simple_repeat	1	23	(0)	2525555
15	17.5	0.0	0.0	chr3	20040242	20040274	(178255285)	+	(GCCGCC)n	Simple_repeat	1	33	(0)	2525556
21	22.5	1.2	6.0	chr3	20040468	20040549	(178255010)	+	G-rich	Low_complexity	1	83	(0)	2525557
33	9.0	5.0	0.0	chr3	20040837	20040896	(178254663)	+	(CCCGCCT)n	Simple_repeat	1	63	(0)	2525558
216	29.0	5.3	7.0	chr3	20185677	20185791	(178109768)	C	MIRb	SINE/MIR	(9)	259	147	2525825
3715	23.0	3.6	3.7	chr3	20324646	20325533	(177970026)	C	MSTD-int	LTR/ERVL-MaLR	(847)	888	2	2526023
1668	20.8	6.3	3.6	chr3	20325536	20325919	(177969640)	C	MSTD	LTR/ERVL-MaLR	(0)	396	2	2526023
20	9.7	0.0	2.8	chr3	31532887	31532922	(166762637)	+	(CCT)n	Simple_repeat	1	36	(0)	2542253
14	18.9	4.5	2.2	chr3	31533127	31533170	(166762389)	+	(GGC)n	Simple_repeat	1	46	(0)	2542254
345	19.6	1.1	2.1	chr3	32501532	32501625	(165793934)	+	Charlie26a	DNA/hAT-Charlie	110	202	(123)	2543988
263	33.5	0.3	0.8	chr3	32948056	32948172	(165347387)	+	MIRc	SINE/MIR	39	159	(109)	2545011
2087	10.6	0.3	0.7	chr3	32948182	32948464	(165347095)	+	AluSq	SINE/Alu	1	282	(31)	2545012
272	17.6	4.2	5.6	chr3	33097529	33097600	(165197959)	+	MER5A	DNA/hAT-Charlie	5	75	(114)	2545278
2330	6.8	0.0	0.0	chr3	33097601	33097878	(165197681)	+	AluSq2	SINE/Alu	15	292	(21)	2545279
2062	11.7	1.3	1.0	chr3	33114944	33115243	(165180316)	C	AluJb	SINE/Alu	(10)	302	2	2545327
253	32.7	1.7	5.0	chr3	33441832	33441950	(164853609)	C	MIRc	SINE/MIR	(119)	149	35	2545869
280	33.3	2.6	8.1	chr3	33901471	33901594	(164393965)	+	L2b	LINE/L2	3240	3356	(19)	2546649
2176	11.3	0.0	0.0	chr3	33901596	33901914	(164393645)	C	AluSx1	SINE/Alu	(0)	312	2	2546650
3753	11.4	1.9	3.0	chr3	37241698	37242231	(161053328)	C	MER1A	DNA/hAT-Charlie	(0)	529	2	2551251
14	0.0	0.0	0.0	chr3	38454761	38454778	(159840781)	+	(GCA)n	Simple_repeat	1	18	(0)	2553073
2397	10.2	0.0	0.3	chr3	39384789	39385101	(158910458)	C	AluSz	SINE/Alu	(0)	312	1	2554428
26503	2.5	0.1	0.0	chr3	43565823	43571847	(154723712)	+	L1PA2	LINE/L1	125	6154	(1)	2560809
14	12.5	5.4	2.6	chr3	44968312	44968348	(153327211)	+	A-rich	Low_complexity	1	39	(0)	2562969
1738	17.0	1.1	0.4	chr3	44968418	44968693	(153326866)	+	AluJo	SINE/Alu	3	280	(32)	2562970
23	0.0	0.0	0.0	chr3	44975748	44975772	(153319787)	+	(TC)n	Simple_repeat	1	25	(0)	2562980
38	0.0	0.0	0.0	chr3	44975773	44975805	(153319754)	+	(CA)n	Simple_repeat	1	33	(0)	2562981
13	5.3	0.0	0.0	chr3	44975979	44975998	(153319561)	+	(CCG)n	Simple_repeat	1	20	(0)	2562982
3845	11.1	0.7	2.0	chr3	45061285	45061704	(153233855)	+	MER41A	LTR/ERV1	1	415	(139)	2563147
2138	10.6	0.0	0.0	chr3	45061705	45061978	(153233581)	C	AluSz	SINE/Alu	(37)	275	2	2563148
312	31.9	11.1	3.1	chr3	45104561	45104751	(153190808)	C	MIRb	SINE/MIR	(54)	214	7	2563232
2251	10.1	2.0	0.0	chr3	45104772	45105067	(153190492)	+	AluSp	SINE/Alu	1	302	(11)	2563233
713	0.0	0.0	0.0	chr3	45688998	45689071	(152606488)	C	tRNA-Arg-CGY_	tRNA	(2)	74	1	2564290
1121	18.9	26.6	0.7	chr3	46508869	46509177	(151786382)	C	MER47B	DNA/TcMar-Tigger	(0)	418	1	2565503
294	17.2	0.0	4.9	chr3	46509178	46509197	(151786362)	C	MLT2B2	LTR/ERVL	(43)	519	500	2565502
834	11.5	0.0	0.0	chr3	46509199	46509311	(151786248)	+	MER83	LTR/ERV1	1	113	(335)	2565504
1667	13.3	8.2	6.7	chr3	46509386	46509731	(151785828)	+	MER83	LTR/ERV1	97	448	(0)	2565504
240	30.0	3.9	4.8	chr3	46948067	46948171	(151347388)	C	MIRc	SINE/MIR	(49)	219	116	2566149
21	4.2	0.0	0.0	chr3	46976958	46976982	(151318577)	+	(A)n	Simple_repeat	1	25	(0)	2566210
2665	4.0	0.0	0.0	chr3	46977193	46977495	(151318064)	+	AluSc5	SINE/Alu	1	303	(6)	2566211
14	23.0	1.8	5.3	chr3	46979798	46979853	(151315706)	+	(CGG)n	Simple_repeat	1	57	(0)	2566214
14	7.8	0.0	6.5	chr3	46979838	46979868	(151315691)	+	(GCCGG)n	Simple_repeat	1	31	(0)	2566215
31	16.1	2.4	9.4	chr3	46979917	46980041	(151315518)	+	(GCCCGC)n	Simple_repeat	1	128	(0)	2566216
1775	26.1	15.7	3.5	chr3	47315159	47316335	(150979224)	+	HAL1	LINE/L1	187	1519	(988)	2566906
246	33.3	1.1	0.0	chr3	47503123	47503209	(150792350)	C	MIRb	SINE/MIR	(92)	176	89	2567301
21	22.6	0.0	0.0	chr3	50370691	50370733	(147924826)	+	(CA)n	Simple_repeat	1	43	(0)	2572960
19	13.0	0.0	0.0	chr3	51538798	51538831	(146756728)	+	(CCG)n	Simple_repeat	1	34	(0)	2574563
14	17.3	5.1	0.0	chr3	51538872	51538910	(146756649)	+	(CGGCG)n	Simple_repeat	1	41	(0)	2574564
813	4.6	6.9	0.9	chr3	52279087	52279195	(146016364)	C	AluSg	SINE/Alu	(152)	158	43	2575688
816	29.9	4.2	3.4	chr3	69787882	69788120	(128507439)	C	MIRb	SINE/MIR	(8)	260	20	2604806
2278	3.6	0.0	0.0	chr3	69788135	69788408	(128507151)	C	L1PA4	LINE/L1	(0)	6155	5882	2604807
11918	11.2	3.1	1.2	chr3	81549327	81550475	(116745084)	+	MER41-int	LTR/ERV1	4779	5946	(0)	2622203
7421	4.9	23.1	0.2	chr3	85504025	85505239	(112790320)	C	LTR12C	LTR/ERV1	(0)	1579	3	2627104
20	8.4	5.3	0.0	chr3	99876079	99876116	(98419443)	+	(GCCGGG)n	Simple_repeat	1	40	(0)	2640829
622	24.5	9.2	2.5	chr3	120595854	120596055	(77699504)	C	MIRc	SINE/MIR	(39)	229	12	2669375
1639	16.4	5.0	3.7	chr3	124689204	124689502	(73606057)	C	AluJb	SINE/Alu	(9)	303	1	2675702
2427	13.2	3.0	3.9	chr3	126084798	126085370	(72210189)	+	MER4E	LTR/ERV1	19	756	(10)	2678110
26	2.8	2.6	2.6	chr3	129607107	129607144	(68688415)	+	(TCTCTGCG)n	Simple_repeat	1	39	(0)	2684063
14	22.4	2.4	0.0	chr3	129607184	129607225	(68688334)	+	(TTCTGC)n	Simple_repeat	1	43	(0)	2684064
1116	30.2	19.6	2.3	chr3	130378136	130379000	(67916559)	+	L2a	LINE/L2	2364	3386	(40)	2685414
27419	3.7	0.2	0.2	chr3	131331471	131337625	(66957934)	+	L1PA3	LINE/L1	2	6152	(3)	2686749
28167	2.6	0.1	0.1	chr3	132371233	132377261	(65918298)	C	L1PA2	LINE/L1	(1)	6154	124	2688385
1047	25.1	7.0	7.5	chr3	132377262	132377761	(65917798)	C	HAL1ME	LINE/L1	(832)	1633	1020	2688384
12	17.1	2.9	2.8	chr3	138608976	138609010	(59686549)	+	(CGCC)n	Simple_repeat	1	36	(0)	2697787
13	22.5	2.3	2.3	chr3	138609063	138609105	(59686454)	+	(GCG)n	Simple_repeat	1	44	(0)	2697788
182	25.8	9.6	1.5	chr3	138915350	138915416	(59380143)	C	L2a	LINE/L2	(47)	3379	3307	2698510
581	27.9	7.3	6.6	chr3	140941197	140941468	(57354091)	C	L1ME3G	LINE/L1	(291)	633	360	2701539
322	32.5	13.8	3.0	chr3	141805152	141805319	(56490240)	+	L2c	LINE/L2	3186	3386	(1)	2702887
180	27.4	3.8	0.0	chr3	141805298	141805348	(56490211)	C	L3b	LINE/CR1	(260)	4972	4920	2702888
199	25.5	4.0	7.5	chr3	141805345	141805453	(56490106)	C	L2c	LINE/L2	(2)	3373	3258	2702889
548	15.5	0.0	0.0	chr3	141805467	141805550	(56490009)	C	BLACKJACK	DNA/hAT-Blackjack	(2883)	86	3	2702890
13	11.6	2.2	8.7	chr3	142225686	142225730	(56069829)	+	(CAGCCGC)n	Simple_repeat	1	46	(0)	2703768
12	31.9	3.2	0.0	chr3	142596364	142596425	(55699134)	+	G-rich	Low_complexity	1	64	(0)	2704384
229	33.3	5.2	2.0	chr3	143307433	143307582	(54987977)	C	MIR3	SINE/MIR	(38)	170	16	2705501
405	25.2	6.1	4.5	chr3	143307868	143307979	(54987580)	+	MER81	DNA/hAT-Blackjack	1	114	(0)	2705502
198	27.9	7.6	0.0	chr3	150733838	150733898	(47561661)	C	L2b	LINE/L2	(17)	3358	3293	2715762
536	35.0	0.0	4.3	chr3	153217026	153217213	(45078346)	C	MIRb	SINE/MIR	(10)	258	79	2719446
29	20.0	0.0	0.0	chr3	153217333	153217389	(45078170)	+	(AC)n	Simple_repeat	1	57	(0)	2719447
2629	4.7	0.3	0.0	chr3	153217505	153217803	(45077756)	C	AluY	SINE/Alu	(10)	301	2	2719448
17	8.0	0.0	0.0	chr3	156606243	156606269	(41689290)	+	(GCCG)n	Simple_repeat	1	27	(0)	2724283
22	7.7	2.2	4.3	chr3	156674852	156674896	(41620663)	+	(GCCCCG)n	Simple_repeat	1	46	(0)	2724395
16	18.9	0.0	0.0	chr3	170180551	170180580	(28114979)	+	(T)n	Simple_repeat	1	30	(0)	2742509
553	26.5	8.4	1.7	chr3	171183145	171183378	(27112181)	C	LTR50	LTR/ERVL	(544)	251	1	2744143
16	14.2	0.0	0.0	chr3	171810484	171810514	(26485045)	+	(GGGA)n	Simple_repeat	1	31	(0)	2745122
416	32.1	1.4	0.0	chr3	172180239	172180378	(26115181)	+	MER5A	DNA/hAT-Charlie	43	184	(5)	2745722
2396	12.0	0.0	1.9	chr3	176959606	176959921	(21335638)	+	AluSg	SINE/Alu	1	310	(0)	2752355
339	29.0	3.9	1.6	chr3	176959956	176960081	(21335478)	+	MLT1J	LTR/ERVL-MaLR	382	510	(2)	2752352
278	33.1	8.3	6.8	chr3	176960082	176960401	(21335158)	+	Tigger15a	DNA/TcMar-Tigger	157	481	(234)	2752356
58	7.9	2.0	2.9	chr3	177339390	177339479	(20956080)	+	(TTTC)n	Simple_repeat	1	89	(0)	2753087
79	3.4	1.0	2.1	chr3	177339480	177339575	(20955984)	+	(TTCC)n	Simple_repeat	1	97	(0)	2753088
2276	9.9	0.3	0.0	chr3	177339576	177339879	(20955680)	C	AluSp	SINE/Alu	(0)	313	2	2753089
428	25.4	10.8	3.4	chr3	177358979	177359157	(20936402)	C	MIRb	SINE/MIR	(70)	198	5	2753123
20	15.5	2.3	0.0	chr3	182980714	182980756	(15314803)	+	G-rich	Low_complexity	1	44	(0)	2761872
674	20.7	4.2	10.2	chr3	183178905	183179130	(15116429)	+	MER20	DNA/hAT-Charlie	2	213	(6)	2762245
2329	8.2	0.0	0.7	chr3	184298420	184298725	(13996834)	+	AluSx1	SINE/Alu	1	304	(8)	2764409
31	14.1	0.0	0.0	chr3	185253762	185253810	(13041749)	+	(A)n	Simple_repeat	1	49	(0)	2766052
18	16.7	7.9	5.2	chr3	185498746	185498834	(12796725)	+	(GATCCCG)n	Simple_repeat	1	96	(0)	2766483
215	30.8	7.2	6.2	chr3	193656255	193656351	(4639208)	+	MIRc	SINE/MIR	12	109	(159)	2779813
610	28.1	7.6	1.9	chr3	193656665	193656914	(4638645)	C	MER102a	DNA/hAT-Charlie	(75)	266	2	2779814
379	30.6	3.4	4.2	chr3	193843511	193843652	(4451907)	C	MIR3	SINE/MIR	(49)	159	20	2780097
2030	7.7	3.7	0.0	chr3	194583529	194583814	(3711745)	+	AluSx4	SINE/Alu	1	297	(13)	2781439
13	13.1	5.6	9.3	chr3	195270948	195271018	(3024541)	+	(GGCCAGC)n	Simple_repeat	1	75	(0)	2782627
702	10.6	15.2	0.9	chr3	196943621	196943733	(1351826)	C	AluJb	SINE/Alu	(173)	139	8	2786083
184	25.7	18.6	0.0	chr3	196943755	196943824	(1351735)	C	MIR	SINE/MIR	(160)	102	17	2786084
582	17.1	8.3	1.6	chr3	196943908	196944030	(1351529)	+	FLAM_A	SINE/Alu	1	132	(10)	2786085
17	22.6	2.7	5.3	chr3	197003012	197003085	(1292474)	+	G-rich	Low_complexity	1	76	(0)	2786205
109	4.4	0.8	0.0	chr3	197510600	197510718	(784841)	+	(GT)n	Simple_repeat	1	120	(0)	2787043
1423	8.7	0.0	1.1	chr3	197739227	197739411	(556148)	+	AluYh3	SINE/Alu	119	301	(10)	2787432
2325	4.1	0.0	7.9	chr3	197739412	197739726	(555833)	+	AluY	SINE/Alu	1	290	(21)	2787433
1985	14.0	1.3	1.3	chr3	197739756	197740055	(555504)	+	AluSz	SINE/Alu	1	300	(12)	2787434
180	22.9	12.7	0.0	chr4	1130610	1130657	(189083898)	+	MamTip2	DNA/hAT-Tip100	179	233	(72)	2789909
419	33.1	6.0	0.0	chr4	1130930	1131086	(189083469)	+	MIR	SINE/MIR	73	239	(23)	2789910
1032	25.6	7.2	0.3	chr4	1544386	1544761	(188669794)	+	MLT1C	LTR/ERVL-MaLR	37	440	(27)	2790295
260	18.2	4.9	0.0	chr4	1568417	1568517	(188646038)	C	MIR3	SINE/MIR	(100)	168	58	2790308
55	20.5	1.3	4.4	chr4	1568662	1568819	(188645736)	+	(CCCAC)n	Simple_repeat	1	160	(0)	2790309
2257	12.0	0.3	0.0	chr4	1704924	1705224	(188509331)	C	AluSp	SINE/Alu	(9)	304	3	2790504
714	15.5	4.6	3.1	chr4	2009803	2009931	(188204624)	C	AluJo	SINE/Alu	(180)	132	2	2790937
7969	6.3	23.6	0.1	chr4	6672541	6673747	(183540808)	+	LTR12C	LTR/ERV1	2	1579	(0)	2798852
12	20.8	3.1	7.6	chr4	6716367	6716430	(183498125)	+	(CGC)n	Simple_repeat	1	66	(0)	2798931
1723	16.9	0.8	0.4	chr4	6900072	6900337	(183314218)	+	AluJb	SINE/Alu	1	267	(45)	2799277
13	19.9	9.2	1.4	chr4	6900510	6900574	(183313981)	+	(AGGCTGG)n	Simple_repeat	1	71	(0)	2799278
1868	21.7	8.3	0.5	chr4	10182522	10182965	(180031590)	C	L1PA15	LINE/L1	(16)	6149	5668	2804254
2116	19.0	3.9	2.6	chr4	10182967	10183420	(180031135)	C	MER66B	LTR/ERV1	(0)	486	27	2804255
13	16.8	2.8	2.8	chr4	15681302	15681347	(174533208)	+	G-rich	Low_complexity	1	46	(0)	2813056
277	33.7	15.4	1.4	chr4	17511420	17511630	(172702925)	C	MIRb	SINE/MIR	(2)	266	21	2816349
14	18.4	2.7	0.0	chr4	17811198	17811234	(172403321)	+	(CCCGGC)n	Simple_repeat	1	38	(0)	2816977
181	22.7	2.2	0.0	chr4	17811317	17811360	(172403195)	C	MIRc	SINE/MIR	(135)	133	89	2816978
247	26.1	18.6	1.1	chr4	25238056	25238237	(164976318)	C	L4_A_Mam	LINE/RTE-X	(31)	4959	4739	2828562
501	21.8	7.2	1.6	chr4	25914492	25914691	(164299864)	+	MIRb	SINE/MIR	10	219	(49)	2829998
474	25.6	9.6	4.2	chr4	25914731	25914946	(164299609)	C	MIRb	SINE/MIR	(5)	263	35	2829999
202	32.4	3.9	0.0	chr4	26320446	26320519	(163894036)	+	L2b	LINE/L2	3298	3374	(1)	2830849
458	22.7	12.2	8.0	chr4	26860087	26860273	(163354282)	+	MIR	SINE/MIR	57	252	(10)	2831733
2741	8.0	0.0	0.0	chr4	38669611	38669923	(151544632)	+	AluSq	SINE/Alu	1	313	(0)	2848202
1621	12.7	1.4	10.2	chr4	40230343	40230657	(149983898)	C	AluSz	SINE/Alu	(24)	288	2	2851533
47	2.2	0.0	0.0	chr4	49512992	49513038	(140701517)	+	(TCTG)n	Simple_repeat	1	47	(0)	2865181
43	13.2	2.7	0.0	chr4	49513072	49513146	(140701409)	+	(CA)n	Simple_repeat	1	77	(0)	2865182
240	17.2	3.6	5.6	chr4	54094753	54094840	(136119715)	+	L2b	LINE/L2	3281	3414	(12)	2868723
182	32.1	7.8	1.9	chr4	56387059	56387166	(133827389)	C	MIRc	SINE/MIR	(34)	234	120	2872523
967	25.6	8.0	2.1	chr4	56390019	56390405	(133824150)	+	LTR40c	LTR/ERVL	49	460	(5)	2872528
378	30.4	2.3	4.6	chr4	67576009	67576139	(122638416)	+	MIR	SINE/MIR	11	138	(124)	2887170
710	29.9	5.2	6.1	chr4	67576142	67576454	(122638101)	+	L2a	LINE/L2	3117	3426	(0)	2887171
18	21.1	1.7	4.9	chr4	68349770	68349829	(121864726)	+	(CCG)n	Simple_repeat	1	61	(0)	2888211
15	8.6	7.3	4.5	chr4	72568595	72568635	(117645920)	+	GA-rich	Low_complexity	1	44	(0)	2893667
1762	18.3	3.6	3.7	chr4	78622963	78623345	(111591210)	+	MLT2D	LTR/ERVL	1	514	(42)	2902424
12032	21.1	8.6	4.6	chr4	78695328	78696788	(111517767)	C	MER41-int	LTR/ERV1	(294)	6037	4326	2902578
4838	16.0	2.9	1.4	chr4	82735099	82735949	(107478606)	+	MER6	DNA/TcMar-Tigger	2	865	(0)	2908143
2098	11.2	3.7	9.9	chr4	83495529	83495581	(106718974)	C	L1MA5A	LINE/L1	(0)	6297	6245	2909645
2329	8.4	0.3	1.4	chr4	83495582	83495877	(106718678)	C	AluYk2	SINE/Alu	(18)	293	1	2909646
2098	11.2	3.7	9.9	chr4	83495878	83495984	(106718571)	C	L1MA5A	LINE/L1	(53)	6244	6159	2909645
868	23.3	12.6	4.9	chr4	86940700	86940765	(103273790)	C	LTR40b	LTR/ERVL	(264)	198	121	2914654
2125	11.8	0.0	2.0	chr4	86940806	86941102	(103273453)	+	AluSx1	SINE/Alu	1	291	(21)	2914656
639	21.9	4.0	9.4	chr4	86941108	86941229	(103273326)	C	LTR40a	LTR/ERVL	(319)	200	86	2914657
1537	18.9	1.1	4.4	chr4	86941230	86941375	(103273180)	+	AluJr	SINE/Alu	2	144	(168)	2914658
268	25.4	6.2	2.4	chr4	88524141	88524265	(101690290)	C	MamRep4096	DNA/hAT-Tip100	(275)	151	22	2917327
15	26.6	0.0	0.0	chr4	102345350	102345394	(87869161)	+	(CTGT)n	Simple_repeat	1	45	(0)	2935547
470	26.1	13.3	3.6	chr4	103020009	103020231	(87194324)	+	MIR	SINE/MIR	5	252	(10)	2936489
397	28.6	5.9	0.0	chr4	108763542	108763653	(81450902)	C	MIRc	SINE/MIR	(30)	238	120	2944021
2375	8.8	0.3	2.0	chr4	109422667	109423001	(80791554)	C	AluSx4	SINE/Alu	(0)	310	2	2944926
2596	17.2	1.3	1.3	chr4	122700198	122700669	(67513886)	+	MER70A	LTR/ERVL	1	472	(0)	2962867
917	21.5	4.8	9.5	chr4	139214206	139214488	(51000067)	C	MLT1B	LTR/ERVL-MaLR	(121)	269	1	2984188
53	19.4	3.4	6.0	chr4	144016306	144016484	(46198071)	+	(TTCC)n	Simple_repeat	1	185	(0)	2991069
212	24.0	11.8	7.4	chr4	144016487	144016567	(46197988)	C	L2a	LINE/L2	(6)	3420	3336	2991070
49	23.7	2.8	4.9	chr4	144137666	144137843	(46076712)	+	(TTCC)n	Simple_repeat	1	183	(0)	2991246
224	22.7	11.8	7.4	chr4	144137846	144137926	(46076629)	C	L2a	LINE/L2	(6)	3420	3336	2991247
14	24.8	3.0	4.3	chr4	145180703	145180769	(45033786)	+	(CGCCGC)n	Simple_repeat	1	69	(0)	2992523
18	3.5	0.0	6.1	chr4	146175529	146175561	(44038994)	+	(TTTTG)n	Simple_repeat	1	33	(0)	2993935
16	13.2	0.0	0.0	chr4	150952624	150952648	(39261907)	+	(TC)n	Simple_repeat	1	25	(0)	3000502
295	26.9	12.3	3.9	chr4	151099121	151099275	(39115280)	C	MIRb	SINE/MIR	(72)	196	27	3000859
36	6.7	0.0	0.0	chr4	152535804	152535850	(37678705)	+	(CCGGCT)n	Simple_repeat	1	47	(0)	3003139
27	6.1	0.0	0.0	chr4	152535997	152536031	(37678524)	+	(CAGCGG)n	Simple_repeat	1	35	(0)	3003140
13	18.3	0.0	5.3	chr4	158769379	158769423	(31445132)	+	G-rich	Low_complexity	1	42	(0)	3011885
66	3.1	0.0	0.0	chr4	159104490	159104554	(31110001)	+	(GA)n	Simple_repeat	1	65	(0)	3012419
24	9.5	0.0	0.0	chr4	159104555	159104588	(31109967)	+	(TG)n	Simple_repeat	1	34	(0)	3012420
1496	21.3	8.7	11.2	chr4	172992651	172993075	(17221480)	C	LTR8	LTR/ERV1	(346)	381	4	3030988
1752	16.0	9.0	2.8	chr4	172993080	172993432	(17221123)	+	MLT1B	LTR/ERVL-MaLR	3	379	(11)	3030989
224	20.0	2.4	0.0	chr4	173264493	173264532	(16950023)	+	MIR3	SINE/MIR	112	152	(56)	3031369
20	8.5	0.0	7.0	chr4	173527236	173527278	(16687277)	+	(CCT)n	Simple_repeat	1	43	(0)	3031754
2078	12.0	0.3	4.9	chr4	174221780	174222104	(15992451)	C	AluSx1	SINE/Alu	(1)	311	2	3032663
238	33.2	4.7	6.4	chr4	182261499	182261717	(7952838)	+	MARNA	DNA/TcMar-Mariner	278	492	(94)	3043186
365	31.1	10.0	1.5	chr4	184268065	184268394	(5946161)	+	L1M6	LINE/L1	1136	1496	(5000)	3046277
15	13.6	0.0	2.9	chr4	184649179	184649212	(5565343)	+	(CCCCGG)n	Simple_repeat	1	34	(0)	3046946
19	16.0	4.2	6.7	chr4	185143506	185143577	(5070978)	+	(GGCGG)n	Simple_repeat	1	75	(0)	3047770
905	22.6	6.3	0.0	chr4	186805082	186805289	(3409266)	C	MER58A	DNA/hAT-Charlie	(0)	224	3	3050167
2487	23.1	8.7	2.1	chr5	996795	997467	(180540792)	+	MER72	LTR/ERV1	1	722	(0)	3055886
4449	24.7	7.2	1.4	chr5	12614767	12616035	(168922224)	+	MLT1F2-int	LTR/ERVL-MaLR	120	1467	(22)	3069781
1692	16.3	7.4	0.0	chr5	21479959	21480258	(160058001)	+	MER2	DNA/TcMar-Tigger	22	345	(0)	3082060
320	22.9	12.5	4.5	chr5	21480265	21480374	(160057885)	C	L2a	LINE/L2	(97)	3329	3210	3082061
2340	8.3	0.0	4.9	chr5	32313455	32313634	(149224625)	C	AluSq2	SINE/Alu	(3)	310	139	3096592
36	0.0	0.0	0.0	chr5	32313635	32313665	(149224594)	+	(TG)n	Simple_repeat	1	31	(0)	3096593
2128	8.8	0.0	0.0	chr5	32313666	32313928	(149224331)	C	AluSg	SINE/Alu	(42)	268	6	3096594
478	17.3	17.6	0.0	chr5	32613327	32613494	(148924765)	C	Charlie10	DNA/hAT-Charlie	(51)	2771	2568	3097207
323	29.5	10.9	4.9	chr5	33441308	33441471	(148096788)	C	MIR3	SINE/MIR	(0)	208	34	3098353
268	33.3	4.9	6.2	chr5	34929004	34929147	(146609112)	+	MIR3	SINE/MIR	8	149	(59)	3100652
11	15.9	0.0	9.3	chr5	39016542	39016584	(142521675)	+	A-rich	Low_complexity	1	43	(0)	3106960
189	28.3	4.8	0.0	chr5	40756193	40756252	(140782007)	C	L2c	LINE/L2	(52)	3335	3273	3109365
491	28.5	8.0	10.4	chr5	40802147	40802256	(140736003)	C	Chap1_Mam	DNA/hAT-Charlie	(73)	269	161	3109440
1650	17.9	0.3	2.0	chr5	40802257	40802553	(140735706)	C	AluJr4	SINE/Alu	(20)	292	1	3109441
1907	15.3	0.3	1.0	chr5	40835925	40836237	(140702022)	+	AluJb	SINE/Alu	1	311	(1)	3109516
755	27.4	8.1	2.2	chr5	40840524	40841045	(140697214)	C	L1ME4b	LINE/L1	(129)	795	353	3109529
203	26.4	4.0	4.0	chr5	40841069	40841143	(140697116)	C	L2c	LINE/L2	(198)	3189	3115	3109530
7008	16.4	2.9	2.4	chr5	42976054	42977018	(138561241)	C	LTR57-int	LTR/ERVL	(3837)	1506	538	3112347
8319	12.3	4.0	4.8	chr5	42987522	42989161	(138549098)	C	MER4-int	LTR/ERV1	(1)	6597	5096	3112364
23	9.8	4.3	2.1	chr5	42994133	42994178	(138544081)	+	(GTT)n	Simple_repeat	1	48	(0)	3112370
2143	15.1	18.2	0.2	chr5	43007613	43008023	(138530236)	+	MER61D	LTR/ERV1	1	501	(0)	3112396
2106	10.1	1.7	0.0	chr5	43008369	43008655	(138529604)	C	AluSz	SINE/Alu	(20)	292	1	3112397
1891	15.9	20.4	3.2	chr5	43063964	43064332	(138473927)	+	MER61D	LTR/ERV1	3	464	(37)	3112476
2298	10.2	0.0	0.0	chr5	43064333	43064635	(138473624)	+	AluSx	SINE/Alu	2	304	(8)	3112477
2271	9.2	0.3	0.0	chr5	43120440	43120734	(138417525)	C	AluSx1	SINE/Alu	(16)	296	1	3112575
315	30.2	4.0	0.0	chr5	43390027	43390122	(138148137)	C	MamRep488	DNA/hAT-Tip100	(0)	219	120	3113023
20	15.7	2.3	0.0	chr5	44809324	44809366	(136728893)	+	(CCCGAG)n	Simple_repeat	1	44	(0)	3114717
235	25.0	7.4	4.3	chr5	54310447	54310538	(127227721)	+	Tigger15a	DNA/TcMar-Tigger	1	95	(620)	3121528
4442	19.9	6.3	5.5	chr5	54421835	54423220	(127115039)	+	MER92-int	LTR/ERV1	2722	4119	(1099)	3121687
332	28.0	4.8	2.5	chr5	54845869	54845989	(126692270)	+	MIRc	SINE/MIR	64	187	(81)	3122344
581	26.3	9.2	4.3	chr5	57494370	57494719	(124043540)	+	HAL1	LINE/L1	1	369	(2138)	3126846
1256	21.0	1.9	2.2	chr5	57494779	57495094	(124043165)	C	MLT1H	LTR/ERVL-MaLR	(228)	321	7	3126847
12	9.7	0.0	0.0	chr5	61332972	61332993	(120205266)	+	(CCGT)n	Simple_repeat	1	22	(0)	3132109
17	6.1	11.8	0.0	chr5	68420968	68421001	(113117258)	+	(CT)n	Simple_repeat	1	38	(0)	3142228
13	23.2	3.9	1.9	chr5	69094190	69094241	(112444018)	+	(GCGGCA)n	Simple_repeat	1	54	(0)	3143234
15	12.6	0.0	7.5	chr5	69094270	69094309	(112443950)	+	(CGG)n	Simple_repeat	1	40	(0)	3143235
12	10.1	9.4	0.0	chr5	72320529	72320560	(109217699)	+	G-rich	Low_complexity	1	35	(0)	3148804
2540	6.9	0.3	0.0	chr5	72320798	72321103	(109217156)	C	AluSx3	SINE/Alu	(4)	307	1	3148805
14	14.4	5.0	2.4	chr5	72956052	72956091	(108582168)	+	(GCGGCGC)n	Simple_repeat	1	42	(0)	3149768
1492	22.2	3.3	6.1	chr5	73488743	73489006	(108049253)	C	MLT1A	LTR/ERVL-MaLR	(118)	256	1	3150565
1795	12.4	0.4	5.2	chr5	76402098	76402387	(105135872)	C	AluJo	SINE/Alu	(35)	277	2	3154969
2289	8.6	2.3	0.7	chr5	76739260	76739560	(104798699)	+	AluSq2	SINE/Alu	1	306	(7)	3155493
41	13.8	3.2	3.1	chr5	81751267	81751359	(99786900)	+	(CCTC)n	Simple_repeat	1	96	(0)	3163565
12	8.6	0.0	6.9	chr5	81852164	81852192	(99686067)	+	(AACA)n	Simple_repeat	1	29	(0)	3163718
12	31.9	0.0	0.0	chr5	91383758	91383804	(90154455)	+	G-rich	Low_complexity	1	47	(0)	3176171
9941	9.0	0.0	0.1	chr5	95710731	95712075	(85826184)	C	HERVS71-int	LTR/ERV1	(5742)	3236	1893	3181554
87	0.0	0.0	0.0	chr5	96808188	96808261	(84729998)	+	(GT)n	Simple_repeat	1	74	(0)	3183133
18	12.0	0.0	0.0	chr5	96808270	96808296	(84729963)	+	(T)n	Simple_repeat	1	27	(0)	3183134
193	23.8	11.0	9.5	chr5	103605252	103605367	(77932892)	+	Penelope1_Vert	LINE/Penelope	36	153	(934)	3191664
2038	15.7	0.3	0.0	chr5	109427291	109427584	(72110675)	+	AluJr	SINE/Alu	1	295	(17)	3198978
14	20.0	2.4	2.3	chr5	112922243	112922284	(68615975)	+	(GCG)n	Simple_repeat	1	43	(0)	3203525
24	14.0	5.8	4.1	chr5	112922304	112922372	(68615887)	+	(CGC)n	Simple_repeat	1	73	(0)	3203526
2535	9.4	0.0	0.0	chr5	112977968	112978274	(68559985)	C	AluSg7	SINE/Alu	(2)	307	1	3203650
448	31.3	6.9	3.6	chr5	112978277	112978501	(68559758)	C	MIRb	SINE/MIR	(22)	246	14	3203651
16	11.1	0.0	0.0	chr5	116085200	116085228	(65453031)	+	(GGTGG)n	Simple_repeat	1	29	(0)	3207708
563	28.1	9.9	2.6	chr5	116085485	116085794	(65452465)	+	MER113	DNA/hAT-Charlie	152	486	(35)	3207709
57	0.0	0.0	0.0	chr5	121961699	121961747	(59576512)	+	(AC)n	Simple_repeat	1	49	(0)	3215350
13	25.3	5.4	0.0	chr5	123423087	123423142	(58115117)	+	(CCCCGGT)n	Simple_repeat	1	59	(0)	3217346
13	18.4	5.4	0.0	chr5	123423318	123423354	(58114905)	+	(GCC)n	Simple_repeat	1	39	(0)	3217347
12	19.9	2.3	4.4	chr5	131164982	131165025	(50373234)	+	(TCCCC)n	Simple_repeat	1	45	(0)	3227449
630	28.6	12.6	6.3	chr5	131373394	131374072	(50164187)	+	HAL1	LINE/L1	581	1308	(1199)	3227856
5674	11.8	2.3	1.0	chr5	131746269	131747225	(49791034)	C	L1PA16	LINE/L1	(1)	6165	5201	3228459
333	34.0	9.4	0.1	chr5	131747239	131747403	(49790856)	+	L4_A_Mam	LINE/RTE-X	4124	4330	(660)	3228460
15	18.1	2.6	0.0	chr5	133052191	133052250	(48486009)	+	(GCCGGA)n	Simple_repeat	1	61	(0)	3230468
11	17.2	7.7	0.0	chr5	134176870	134176908	(47361351)	+	(GGAGGCG)n	Simple_repeat	1	42	(0)	3232043
557	22.5	7.9	0.8	chr5	135271624	135271753	(46266506)	C	MIR	SINE/MIR	(110)	152	13	3234095
1940	9.1	9.4	1.4	chr5	137878215	137878489	(43659770)	C	AluSg	SINE/Alu	(11)	299	1	3237676
14	12.0	0.0	3.5	chr5	138464200	138464228	(43074031)	+	GA-rich	Low_complexity	1	29	(0)	3238914
1192	18.0	4.5	0.5	chr5	138469469	138469662	(43068597)	C	AluJb	SINE/Alu	(26)	286	85	3238922
237	16.2	0.0	0.0	chr5	138469763	138469799	(43068460)	C	MER77B	LTR/ERVL	(282)	418	382	3238923
18	4.7	0.0	0.0	chr5	139710938	139710959	(41827300)	+	(A)n	Simple_repeat	1	22	(0)	3241350
18	17.8	0.0	0.0	chr5	140115059	140115096	(41423163)	+	(AGC)n	Simple_repeat	1	38	(0)	3242048
511	16.2	2.9	1.0	chr5	140719047	140719146	(40819113)	+	L1MD3	LINE/L1	6787	6888	(1107)	3243135
2619	4.5	0.0	1.3	chr5	140719151	140719463	(40818796)	+	AluY	SINE/Alu	1	309	(2)	3243136
636	14.9	1.6	1.6	chr5	140726264	140726386	(40811873)	+	L1MC3	LINE/L1	6737	6859	(926)	3243152
5001	8.1	11.2	7.4	chr5	141297966	141298774	(40239485)	C	LTR25	LTR/ERV1	(0)	844	1	3243847
425	31.9	5.8	0.6	chr5	141968523	141968686	(39569573)	+	MIR	SINE/MIR	78	250	(12)	3244970
247	17.4	6.8	4.2	chr5	141968852	141968923	(39569336)	+	MER5A	DNA/hAT-Charlie	27	100	(89)	3244973
16	12.8	5.7	0.0	chr5	149732036	149732045	(31806214)	+	(GC)n	Simple_repeat	1	10	(0)	3258412
38	0.0	0.0	0.0	chr5	149732046	149732078	(31806181)	+	(GT)n	Simple_repeat	1	33	(0)	3258413
16	12.8	5.7	0.0	chr5	149732079	149732102	(31806157)	+	(GC)n	Simple_repeat	1	26	(0)	3258414
261	26.9	7.1	8.4	chr5	150001510	150001651	(31536608)	C	MIRc	SINE/MIR	(106)	162	23	3259013
460	31.6	8.1	2.5	chr5	150102979	150103176	(31435083)	C	MIRc	SINE/MIR	(27)	241	32	3259212
244	32.9	6.8	0.7	chr5	151081330	151081482	(30456777)	C	MIR3	SINE/MIR	(16)	192	30	3261109
197	28.6	9.5	3.7	chr5	154653888	154653996	(26884263)	C	MIR3	SINE/MIR	(77)	131	16	3267691
229	31.0	10.7	0.0	chr5	160509273	160509372	(21028887)	+	MIR3	SINE/MIR	33	144	(64)	3278299
19	18.9	0.0	0.0	chr5	172006555	172006596	(9531663)	+	(GGCGGC)n	Simple_repeat	1	42	(0)	3296455
368	31.4	0.0	8.8	chr5	175478003	175478173	(6060086)	+	L2a	LINE/L2	2676	2831	(588)	3303489
21	20.7	0.7	8.0	chr5	175478417	175478508	(6059751)	+	G-rich	Low_complexity	1	85	(0)	3303490
12	15.7	2.6	5.0	chr5	176388390	176388428	(5149831)	+	(CCCGGCC)n	Simple_repeat	1	40	(0)	3305144
14	18.7	2.2	4.3	chr5	176416387	176416432	(5121827)	+	(CTCCG)n	Simple_repeat	1	47	(0)	3305205
381	26.6	11.1	5.4	chr5	179699864	179700066	(1838193)	+	MIR	SINE/MIR	46	261	(1)	3311404
13	20.7	3.6	5.2	chr5	180071333	180071388	(1466871)	+	(GGCCGG)n	Simple_repeat	1	58	(0)	3312025
12	20.1	5.0	0.0	chr5	181053620	181053659	(484600)	+	G-rich	Low_complexity	1	42	(0)	3313576
536	14.6	0.0	0.0	chr5	181164564	181164645	(373614)	C	tRNA-Leu-CTY	tRNA	(3)	82	1	3313758
728	1.2	0.0	0.0	chr5	181174044	181174125	(364134)	C	tRNA-Leu-CTY	tRNA	(3)	82	1	3313785
734	0.0	0.0	0.0	chr5	181187701	181187782	(350477)	+	tRNA-Leu-CTY	tRNA	1	82	(3)	3313822
2468	8.0	0.3	0.0	chr5	181188094	181188405	(349854)	+	AluSp	SINE/Alu	1	313	(0)	3313823
670	1.4	0.0	0.0	chr5	181188416	181188488	(349771)	C	tRNA-Val-GTY	tRNA	(3)	73	1	3313824
648	0.0	0.0	0.0	chr5	181188854	181188925	(349334)	C	tRNA-Pro-CCA	tRNA	(3)	72	1	3313825
638	0.0	1.4	0.0	chr5	181191687	181191758	(346501)	C	tRNA-Thr-ACA	tRNA	(3)	73	1	3313826
13	9.3	5.3	5.0	chr5	181191960	181191997	(346262)	+	G-rich	Low_complexity	1	40	(0)	3313827
606	5.6	0.0	0.0	chr5	181206868	181206939	(331320)	+	tRNA-Ala-GCG	tRNA	1	72	(3)	3313850
671	1.3	0.0	0.0	chr5	181207755	181207830	(330429)	+	tRNA-Lys-AAG	tRNA	1	76	(0)	3313853
1911	15.0	3.0	0.3	chr5	181210268	181210561	(327698)	C	AluSz6	SINE/Alu	(9)	303	2	3313861
778	28.2	6.2	2.9	chr5	181210576	181210636	(327623)	C	L1ME4b	LINE/L1	(200)	692	614	3313862
2262	7.9	0.3	2.6	chr5	181210637	181210939	(327320)	C	AluSp	SINE/Alu	(17)	296	1	3313863
2126	8.0	1.1	1.7	chr5	181215995	181216282	(321977)	C	AluSq2	SINE/Alu	(27)	286	1	3313878
688	0.0	0.0	0.0	chr5	181218270	181218342	(319917)	C	tRNA-Val-GTY	tRNA	(3)	73	1	3313881
2391	5.5	1.6	0.7	chr5	181218548	181218855	(319404)	+	AluY	SINE/Alu	1	311	(0)	3313882
667	0.0	0.0	0.0	chr5	181221979	181222051	(316208)	C	tRNA-Lys-AAG	tRNA	(3)	73	1	3313889
14	19.0	5.0	4.8	chr6	2634350	2634409	(168171570)	+	(CCCGCAG)n	Simple_repeat	1	63	(0)	3317715
168	21.2	0.9	0.0	chr6	2834243	2834587	(167971392)	+	(TCCA)n	Simple_repeat	1	348	(0)	3317985
26	22.4	3.7	4.5	chr6	3053779	3053885	(167752094)	+	(CGCCA)n	Simple_repeat	1	111	(0)	3318323
2237	8.8	3.6	0.3	chr6	3053985	3054278	(167751701)	+	AluSx1	SINE/Alu	1	304	(8)	3318324
15	23.0	2.9	8.6	chr6	3118584	3118685	(167687294)	+	(GGCGG)n	Simple_repeat	1	105	(0)	3318430
1000	24.8	5.3	0.0	chr6	3162251	3162484	(167643495)	+	MIR	SINE/MIR	15	261	(1)	3318494
1397	24.9	6.0	6.5	chr6	3175664	3176185	(167629794)	+	MLT1E3	LTR/ERVL-MaLR	52	651	(2)	3318514
1598	28.5	14.5	1.7	chr6	3392439	3393299	(167412680)	C	L2a	LINE/L2	(581)	2838	1849	3318822
644	24.7	5.5	1.0	chr6	3393339	3393530	(167412449)	C	MER3	DNA/hAT-Charlie	(8)	201	1	3318824
188	33.6	1.8	8.3	chr6	3459047	3459166	(167346813)	C	MIRc	SINE/MIR	(149)	119	8	3318919
12	5.6	0.0	0.0	chr6	4021388	4021406	(166784573)	+	(GCC)n	Simple_repeat	1	19	(0)	3319829
556	22.4	2.7	2.7	chr6	4811963	4812109	(165993870)	+	MER5A1	DNA/hAT-Charlie	1	147	(19)	3321097
367	28.2	13.6	6.9	chr6	4812193	4812512	(165993467)	C	L1ME3G	LINE/L1	(296)	628	284	3321098
13	11.7	7.7	2.4	chr6	4928744	4928782	(165877197)	+	(TTTTC)n	Simple_repeat	1	42	(0)	3321232
2517	7.8	0.0	0.0	chr6	4984387	4984694	(165821285)	C	AluY	SINE/Alu	(3)	308	1	3321313
12	18.6	5.4	0.0	chr6	5004047	5004083	(165801896)	+	(CGCCC)n	Simple_repeat	1	39	(0)	3321336
318	25.8	16.1	1.2	chr6	7119469	7119680	(163686299)	C	L2b	LINE/L2	(226)	3161	2918	3324641
190	32.0	4.8	4.8	chr6	7119699	7119803	(163686176)	C	L2b	LINE/L2	(557)	2862	2758	3324641
2080	13.5	2.2	0.0	chr6	11930767	11931070	(158874909)	+	AluSx	SINE/Alu	1	311	(1)	3331932
1505	20.0	4.6	14.1	chr6	11931071	11931254	(158874725)	+	Charlie1b	DNA/hAT-Charlie	392	523	(0)	3331931
3262	14.8	1.7	6.7	chr6	13441567	13442174	(157363805)	C	MER6A	DNA/TcMar-Tigger	(1)	604	28	3334264
415	8.9	0.0	0.0	chr6	13442178	13442233	(157363746)	+	L1MA8	LINE/L1	6168	6223	(68)	3334265
229	29.5	11.3	1.3	chr6	13574911	13575212	(157230767)	C	L2a	LINE/L2	(689)	2730	2395	3334514
8324	18.0	9.1	2.6	chr6	13670822	13671804	(157134175)	+	L1MB7	LINE/L1	5143	6184	(0)	3334662
538	28.2	15.2	1.8	chr6	13671822	13672214	(157133765)	+	L1MCa	LINE/L1	254	708	(6043)	3334666
13	19.4	4.9	0.0	chr6	14211240	14211280	(156594699)	+	(GCCTC)n	Simple_repeat	1	43	(0)	3335634
2456	17.3	6.6	1.9	chr6	14734064	14734593	(156071386)	+	MER89	LTR/ERV1	3	559	(0)	3336467
507	17.9	0.0	0.0	chr6	15327240	15327323	(155478656)	C	AluJo	SINE/Alu	(8)	304	221	3337796
13	24.6	2.3	0.0	chr6	15400871	15400913	(155405066)	+	(CCTC)n	Simple_repeat	1	44	(0)	3337905
306	28.0	5.1	5.6	chr6	15915804	15915981	(154889998)	+	UCON6	Unknown	64	240	(197)	3338680
1215	29.3	8.2	2.1	chr6	16005496	16006053	(154799926)	C	MLT1L	LTR/ERVL-MaLR	(5)	605	11	3338838
337	24.7	0.0	1.2	chr6	16031246	16031331	(154774648)	+	MER61E	LTR/ERV1	1	85	(484)	3338877
248	15.4	0.0	5.5	chr6	16031311	16031365	(154774614)	+	LTR9D	LTR/ERV1	104	155	(490)	3338878
2444	19.0	3.0	4.1	chr6	16031415	16031909	(154774070)	+	MER61E	LTR/ERV1	85	531	(38)	3338877
29	16.0	5.5	4.2	chr6	16238600	16238690	(154567289)	+	(GCC)n	Simple_repeat	1	96	(0)	3339210
3387	14.0	11.9	1.6	chr6	16265461	16266134	(154539845)	+	LTR12	LTR/ERV1	1	753	(73)	3339250
1123	18.7	2.8	11.2	chr6	16266133	16266520	(154539459)	+	LTR12	LTR/ERV1	349	610	(78)	3339250
2040	7.9	7.3	3.1	chr6	16266521	16266810	(154539169)	+	AluYk3	SINE/Alu	1	303	(8)	3339251
1627	13.1	0.6	11.3	chr6	16266811	16267081	(154538898)	+	LTR12_	LTR/ERV1	363	609	(79)	3339252
2325	6.4	0.7	3.0	chr6	16267082	16267379	(154538600)	+	AluYk2	SINE/Alu	1	291	(20)	3339253
2237	7.0	3.7	1.9	chr6	16267380	16267699	(154538280)	+	LTR12_	LTR/ERV1	363	688	(0)	3339254
2499	6.3	0.0	0.3	chr6	17702226	17702526	(153103453)	+	AluY	SINE/Alu	1	300	(11)	3341629
1245	12.7	0.0	0.0	chr6	17702529	17702701	(153103278)	+	AluSp	SINE/Alu	136	308	(5)	3341630
29	8.3	1.9	1.9	chr6	18263848	18263900	(152542079)	+	(TCC)n	Simple_repeat	1	54	(0)	3342727
1498	9.0	0.0	12.4	chr6	19892028	19892261	(150913718)	+	AluSx1	SINE/Alu	82	286	(26)	3345058
41	0.0	0.0	0.0	chr6	20211970	20212004	(150593975)	+	(AC)n	Simple_repeat	1	35	(0)	3345604
374	26.1	2.6	2.6	chr6	20302756	20302869	(150503110)	+	MamRep434	DNA/TcMar-Tigger	253	366	(60)	3345775
2915	15.9	10.6	0.9	chr6	20445658	20446203	(150359776)	C	MER6A	DNA/TcMar-Tigger	(0)	605	1	3346056
30	0.0	0.0	3.0	chr6	24719179	24719211	(146086768)	+	(ACCAAA)n	Simple_repeat	1	33	(0)	3352412
229	15.8	18.6	0.0	chr6	24775797	24775853	(146030126)	C	MER112	DNA/hAT-Charlie	(1)	260	193	3352543
11	20.7	5.1	0.0	chr6	25992617	25992655	(144813324)	+	(GCGCCT)n	Simple_repeat	1	41	(0)	3354452
1463	16.1	0.9	0.0	chr6	26064766	26064988	(144740991)	C	AluSx	SINE/Alu	(87)	225	1	3354579
2145	9.0	8.1	1.4	chr6	26125750	26126038	(144679941)	C	AluSq	SINE/Alu	(3)	310	1	3354669
257	30.9	0.0	0.0	chr6	26175442	26175509	(144630470)	+	L2b	LINE/L2	3308	3375	(0)	3354769
16	17.6	0.0	0.0	chr6	26175756	26175782	(144630197)	+	(T)n	Simple_repeat	1	27	(0)	3354770
2247	10.4	0.0	4.6	chr6	26176010	26176336	(144629643)	C	AluSz	SINE/Alu	(0)	312	1	3354771
490	21.1	0.7	2.8	chr6	26195793	26195900	(144610079)	+	FLAM_C	SINE/Alu	1	103	(63)	3354810
2239	10.4	1.0	0.0	chr6	26203778	26204074	(144601905)	C	AluSp	SINE/Alu	(12)	301	2	3354819
2109	8.5	4.4	0.3	chr6	26284161	26284442	(144521537)	+	AluSq4	SINE/Alu	1	294	(17)	3354951
651	0.0	0.0	0.0	chr6	26286526	26286597	(144519382)	+	tRNA-Met-i	tRNA	1	72	(3)	3354954
210	31.3	0.0	4.8	chr6	26305006	26305109	(144500870)	C	MER5B	DNA/hAT-Charlie	(63)	115	17	3354980
623	4.2	0.0	0.0	chr6	26311196	26311267	(144494712)	C	tRNA-Gln-CAA	tRNA	(3)	72	1	3354996
623	4.2	0.0	0.0	chr6	26311747	26311818	(144494161)	C	tRNA-Gln-CAA	tRNA	(3)	72	1	3354997
732	1.2	0.0	0.0	chr6	26312596	26312677	(144493302)	C	tRNA-Ser-TCA_	tRNA	(3)	82	1	3354998
651	0.0	0.0	0.0	chr6	26313124	26313195	(144492784)	C	tRNA-Met-i	tRNA	(3)	72	1	3354999
569	14.7	3.8	0.0	chr6	26319887	26319988	(144485991)	+	MER5A	DNA/hAT-Charlie	84	189	(0)	3355018
2272	6.9	0.4	0.0	chr6	26320047	26320360	(144485619)	+	AluSp	SINE/Alu	37	313	(0)	3355019
327	17.7	3.1	0.0	chr6	26322418	26322479	(144483500)	C	AluYb8	SINE/Alu	(18)	300	237	3355022
664	1.4	0.0	0.0	chr6	26322818	26322890	(144483089)	+	tRNA-Arg-CGA	tRNA	1	73	(3)	3355024
752	1.2	0.0	0.0	chr6	26327589	26327673	(144478306)	+	tRNA-Ser-TCY	tRNA	1	85	(0)	3355033
650	1.4	0.0	0.0	chr6	26328140	26328212	(144477767)	+	tRNA-Arg-CGY_	tRNA	1	73	(3)	3355034
651	0.0	0.0	0.0	chr6	26330301	26330372	(144475607)	C	tRNA-Met-i	tRNA	(3)	72	1	3355038
679	0.0	0.0	0.0	chr6	26532917	26532990	(144272989)	C	tRNA-Thr-ACY_	tRNA	(3)	74	1	3355416
650	1.4	0.0	0.0	chr6	26537498	26537570	(144268409)	+	tRNA-Arg-CGY_	tRNA	1	73	(3)	3355427
686	0.0	0.0	0.0	chr6	26538054	26538127	(144267852)	+	tRNA-Val-GTG	tRNA	1	74	(2)	3355428
597	5.6	0.0	0.0	chr6	26553503	26553574	(144252405)	+	tRNA-Ala-GCG	tRNA	1	72	(3)	3355456
668	0.0	0.0	0.0	chr6	26554122	26554195	(144251784)	+	tRNA-Ile-ATT	tRNA	1	74	(3)	3355457
643	0.0	0.0	0.0	chr6	26555270	26555341	(144250638)	+	tRNA-Pro-CCY	tRNA	1	72	(3)	3355459
27	8.2	0.0	0.0	chr6	26555486	26555524	(144250455)	+	(T)n	Simple_repeat	1	39	(0)	3355460
665	0.0	0.0	0.0	chr6	26556546	26556619	(144249360)	+	tRNA-Lys-AAG	tRNA	1	74	(2)	3355461
185	29.0	0.0	1.6	chr6	26556870	26556932	(144249047)	C	MER5A	DNA/hAT-Charlie	(93)	96	35	3355462
631	4.1	0.0	0.0	chr6	26571864	26571936	(144234043)	C	tRNA-Ala-GCY	tRNA	(3)	73	1	3355497
516	4.1	0.0	18.7	chr6	26575570	26575660	(144230319)	+	tRNA-Tyr-TAC	tRNA	1	74	(2)	3355506
384	27.6	15.5	1.6	chr6	26575756	26575943	(144230036)	+	LTR50	LTR/ERVL	42	260	(535)	3355502
511	4.0	0.0	17.8	chr6	26577104	26577193	(144228786)	+	tRNA-Tyr-TAC	tRNA	1	74	(2)	3355507
243	24.6	5.4	12.2	chr6	26594653	26594791	(144211188)	C	L1ME3	LINE/L1	(25)	6137	6009	3355541
514	2.7	0.0	18.0	chr6	26594874	26594962	(144211017)	+	tRNA-Tyr-TAC	tRNA	1	73	(3)	3355542
265	21.9	11.7	0.9	chr6	26595265	26595429	(144210550)	C	L1ME1	LINE/L1	(9)	9295	9163	3355527
1499	16.9	8.9	0.5	chr6	27078759	27079066	(143726913)	+	MER61B	LTR/ERV1	1	427	(0)	3356253
614	1.4	0.0	0.0	chr6	27091742	27091813	(143714166)	+	tRNA-Pro-CCG	tRNA	1	72	(3)	3356276
50	0.0	0.0	0.0	chr6	27145296	27145338	(143660641)	+	(AC)n	Simple_repeat	1	43	(0)	3356366
656	4.0	0.0	0.0	chr6	27162271	27162344	(143643635)	+	tRNA-Thr-ACY_	tRNA	1	74	(3)	3356400
1258	26.6	11.3	1.4	chr6	27174966	27175316	(143630663)	C	MLT1E2	LTR/ERVL-MaLR	(2)	625	236	3356427
27	0.0	3.5	0.0	chr6	27177039	27177067	(143628912)	+	(AAGAAAA)n	Simple_repeat	1	30	(0)	3356431
22	17.3	0.0	0.0	chr6	27177166	27177204	(143628775)	+	A-rich	Low_complexity	1	39	(0)	3356432
677	0.0	0.0	0.0	chr6	27177214	27177288	(143628691)	C	tRNA-Ile-ATT	tRNA	(2)	75	1	3356433
20582	9.6	0.8	3.9	chr6	27188071	27190816	(143615163)	+	HERVKC4-int	LTR/ERVK	1	2671	(2591)	3356439
2183	8.9	0.0	0.0	chr6	27213536	27213815	(143592164)	+	AluSq2	SINE/Alu	1	280	(33)	3356487
671	0.0	0.0	0.0	chr6	27213844	27213916	(143592063)	C	tRNA-Arg-CGY_	tRNA	(3)	73	1	3356488
2395	7.5	0.0	0.7	chr6	27214800	27215104	(143590875)	+	AluSx	SINE/Alu	5	307	(5)	3356490
671	0.0	0.0	0.0	chr6	27215173	27215245	(143590734)	+	tRNA-Arg-CGY_	tRNA	1	73	(3)	3356491
17	0.0	0.0	0.0	chr6	27215261	27215279	(143590700)	+	(T)n	Simple_repeat	1	19	(0)	3356492
678	4.8	0.0	0.0	chr6	27230555	27230637	(143575342)	C	tRNA-Leu-TTA	tRNA	(3)	83	1	3356540
863	30.7	5.9	5.3	chr6	27231697	27231771	(143574208)	+	L1ME5	LINE/L1	5259	5333	(861)	3356544
2304	11.1	0.0	0.0	chr6	27231772	27232077	(143573902)	+	AluSx4	SINE/Alu	2	307	(3)	3356545
657	2.7	0.0	0.0	chr6	27235509	27235581	(143570398)	+	tRNA-Val-GTY	tRNA	1	73	(3)	3356551
2297	7.3	0.0	0.3	chr6	27235607	27235925	(143570054)	C	AluSc5	SINE/Alu	(0)	309	1	3356552
677	0.0	0.0	0.0	chr6	27237570	27237644	(143568335)	C	tRNA-Ile-ATT	tRNA	(2)	75	1	3356559
644	2.7	0.0	0.0	chr6	27275210	27275284	(143530695)	C	tRNA-Ile-ATT	tRNA	(2)	75	1	3356626
608	5.5	0.0	0.0	chr6	27280270	27280342	(143525637)	C	tRNA-Val-GTG	tRNA	(3)	73	1	3356638
578	8.2	0.0	0.0	chr6	27290626	27290698	(143515281)	+	tRNA-Val-GTG	tRNA	1	73	(3)	3356658
523	8.2	0.0	0.0	chr6	27293892	27293964	(143512015)	+	tRNA-Ile-ATT	tRNA	1	73	(4)	3356664
582	6.9	0.0	0.0	chr6	27295433	27295504	(143510475)	+	tRNA-Gln-CAG	tRNA	1	72	(3)	3356668
691	3.7	0.0	0.0	chr6	27297996	27298077	(143507902)	+	tRNA-Ser-AGY	tRNA	1	82	(3)	3356672
650	0.0	0.0	0.0	chr6	27332985	27333056	(143472923)	C	tRNA-Met-i	tRNA	(3)	72	1	3356727
2476	6.2	1.9	0.3	chr6	27473370	27473700	(143332279)	+	AluSx4	SINE/Alu	1	310	(0)	3356942
748	0.0	0.0	0.0	chr6	27478812	27478893	(143327086)	+	tRNA-Ser-TCY	tRNA	1	82	(3)	3356951
643	0.0	0.0	0.0	chr6	27479674	27479745	(143326234)	+	tRNA-Asp-GAY	tRNA	1	72	(3)	3356952
748	0.0	0.0	0.0	chr6	27495814	27495895	(143310084)	+	tRNA-Ser-TCY	tRNA	1	82	(3)	3356989
788	0.0	0.0	0.0	chr6	27503039	27503120	(143302859)	+	tRNA-Ser-TCY	tRNA	1	82	(3)	3357006
748	2.4	0.0	0.0	chr6	27505828	27505909	(143300070)	C	tRNA-Ser-TCA_	tRNA	(3)	82	1	3357009
667	2.8	0.0	0.0	chr6	27519529	27519600	(143286379)	+	tRNA-Gln-CAG	tRNA	1	72	(3)	3357033
767	2.4	0.0	0.0	chr6	27532208	27532289	(143273690)	+	tRNA-Ser-TCY	tRNA	1	82	(3)	3357062
776	1.2	0.0	0.0	chr6	27541775	27541856	(143264123)	C	tRNA-Ser-TCY	tRNA	(3)	82	1	3357082
788	0.0	0.0	0.0	chr6	27545689	27545770	(143260209)	+	tRNA-Ser-TCA_	tRNA	1	82	(3)	3357088
247	15.0	0.0	0.0	chr6	27547588	27547627	(143258352)	+	U2	snRNA	1	40	(148)	3357093
678	1.4	0.0	0.0	chr6	27547752	27547823	(143258156)	C	tRNA-Gln-CAG	tRNA	(3)	72	1	3357094
754	2.4	0.0	0.0	chr6	27553413	27553494	(143252485)	C	tRNA-Ser-TCY	tRNA	(3)	82	1	3357102
15	9.0	12.2	1.8	chr6	27553496	27553544	(143252435)	+	(GACAT)n	Simple_repeat	1	55	(0)	3357103
571	8.3	0.0	0.0	chr6	27576068	27576139	(143229840)	+	tRNA-Lys-AAA	tRNA	2	73	(3)	3357148
665	1.4	0.0	0.0	chr6	27591814	27591886	(143214093)	C	tRNA-Lys-AAA	tRNA	(3)	73	1	3357178
651	0.0	0.0	0.0	chr6	27592821	27592892	(143213087)	C	tRNA-Met-i	tRNA	(3)	72	1	3357179
2277	12.7	0.0	0.9	chr6	27602220	27602534	(143203445)	C	AluSx1	SINE/Alu	(0)	312	1	3357201
595	0.0	0.0	22.2	chr6	27602568	27602675	(143203304)	C	tRNA-Leu-TTG	tRNA	(2)	84	1	3357202
590	0.0	0.0	22.9	chr6	27605637	27605745	(143200234)	C	tRNA-Leu-TTG	tRNA	(2)	84	1	3357208
551	0.0	0.0	21.3	chr6	27631421	27631514	(143174465)	+	tRNA-Ile-ATA	tRNA	1	74	(3)	3357259
617	5.5	0.0	0.0	chr6	27650928	27651000	(143154979)	C	tRNA-Val-GTY	tRNA	(3)	73	1	3357299
633	2.7	0.0	0.0	chr6	27668583	27668657	(143137322)	+	tRNA-Ile-ATT	tRNA	1	75	(2)	3357335
2029	11.5	2.9	2.0	chr6	27668842	27669146	(143136833)	+	AluSp	SINE/Alu	1	308	(5)	3357336
680	0.0	0.0	0.0	chr6	27670564	27670637	(143135342)	C	tRNA-Arg-CGY_	tRNA	(2)	74	1	3357338
2229	9.2	0.7	0.7	chr6	27672004	27672297	(143133682)	C	AluSz	SINE/Alu	(18)	294	1	3357340
692	6.0	0.0	0.0	chr6	27672448	27672531	(143133448)	C	tRNA-Ser-TCG	tRNA	(1)	84	1	3357341
679	0.0	0.0	0.0	chr6	27684695	27684768	(143121211)	C	tRNA-Thr-ACY_	tRNA	(3)	74	1	3357369
648	1.4	0.0	0.0	chr6	27688188	27688261	(143117718)	+	tRNA-Ile-ATT	tRNA	1	74	(3)	3357376
681	0.0	0.0	0.0	chr6	27753400	27753472	(143052507)	C	tRNA-Val-GTY	tRNA	(3)	73	1	3357536
573	7.0	0.0	0.0	chr6	27791357	27791427	(143014552)	C	tRNA-Gln-CAA	tRNA	(4)	71	1	3357599
627	5.4	0.0	0.0	chr6	27795859	27795932	(143010047)	C	tRNA-Gln-CAA	tRNA	(1)	74	1	3357606
486	28.7	6.5	0.6	chr6	27796019	27796176	(143009803)	+	MER20B	DNA/hAT-Charlie	5	172	(611)	3357607
4965	11.3	3.9	2.0	chr6	27825846	27826625	(142979354)	C	LTR5_Hs	LTR/ERVK	(172)	796	2	3357661
626	1.4	0.0	0.0	chr6	27902908	27902978	(142903001)	C	tRNA-Gly-GGY	tRNA	(3)	71	1	3357803
11	25.3	0.0	5.8	chr6	28281975	28282026	(142523953)	+	(GGATGG)n	Simple_repeat	1	52	(0)	3358394
32	3.2	0.0	0.0	chr6	28350085	28350116	(142455863)	+	(TG)n	Simple_repeat	1	32	(0)	3358488
1485	26.5	9.8	3.1	chr6	28400212	28401574	(142404405)	+	L1MC5a	LINE/L1	7	444	(2333)	3358562
619	6.8	0.0	0.0	chr6	28474552	28474625	(142331354)	C	tRNA-Thr-ACG_	tRNA	(3)	74	1	3358684
623	4.0	0.0	0.0	chr6	28488993	28489066	(142316913)	C	tRNA-Thr-ACG_	tRNA	(3)	74	1	3358713
12	31.0	0.0	4.6	chr6	28489989	28490053	(142315926)	+	G-rich	Low_complexity	1	65	(0)	3358716
671	0.0	0.0	0.0	chr6	28543115	28543186	(142262793)	C	tRNA-Arg-CGA	tRNA	(4)	72	1	3358801
1792	15.0	11.9	1.7	chr6	28616551	28616897	(142189082)	C	LTR35A	LTR/ERV1	(160)	387	1	3358917
16	21.6	4.2	0.0	chr6	28709587	28709634	(142096345)	+	(TCT)n	Simple_repeat	1	50	(0)	3359063
180	26.7	0.0	3.2	chr6	28709755	28709816	(142096163)	C	MER5A	DNA/hAT-Charlie	(26)	163	104	3359064
667	1.4	0.0	0.0	chr6	28710589	28710660	(142095319)	+	tRNA-Ala-GCY_	tRNA	1	72	(3)	3359065
4552	15.3	4.7	1.1	chr6	28710855	28711641	(142094338)	+	Tigger7	DNA/TcMar-Tigger	25	840	(1651)	3359066
649	1.4	0.0	0.0	chr6	28719704	28719775	(142086204)	+	tRNA-Ala-GCY_	tRNA	1	72	(3)	3359087
629	4.0	0.0	0.0	chr6	28726018	28726091	(142079888)	+	tRNA-Thr-ACY_	tRNA	1	74	(3)	3359101
499	8.3	0.0	0.0	chr6	28729315	28729386	(142076593)	+	tRNA-Ala-GCY_	tRNA	1	72	(3)	3359110
662	0.0	0.0	0.0	chr6	28742952	28743024	(142062955)	C	tRNA-Arg-CGG	tRNA	(3)	73	1	3359137
589	6.8	0.0	0.0	chr6	28747744	28747816	(142058163)	+	tRNA-Lys-AAA	tRNA	1	73	(3)	3359146
2799	16.1	0.6	2.3	chr6	28747872	28748347	(142057632)	+	MER1A	DNA/hAT-Charlie	62	529	(0)	3359147
2266	10.6	1.0	0.0	chr6	28752401	28752703	(142053276)	+	AluSx	SINE/Alu	1	306	(6)	3359157
2851	10.6	11.8	4.6	chr6	28752704	28753112	(142052867)	C	LTR61	LTR/ERV1	(106)	453	1	3359156
2349	9.2	0.0	0.0	chr6	28753282	28753575	(142052404)	+	AluSq2	SINE/Alu	1	294	(19)	3359158
2509	16.9	6.7	5.5	chr6	28753576	28753633	(142052346)	+	L1MDa	LINE/L1	3904	3957	(2580)	3359148
2038	5.6	9.8	0.4	chr6	28753634	28753901	(142052078)	+	AluY	SINE/Alu	1	296	(15)	3359159
2314	9.2	0.3	0.0	chr6	28756283	28756577	(142049402)	+	AluSg	SINE/Alu	1	296	(14)	3359166
586	18.9	1.6	9.9	chr6	28756578	28756690	(142049289)	C	MER5A	DNA/hAT-Charlie	(23)	166	61	3359165
2287	8.8	0.3	0.0	chr6	28757384	28757677	(142048302)	C	AluSp	SINE/Alu	(16)	297	3	3359168
2416	6.0	1.3	0.0	chr6	28790370	28790670	(142015309)	+	AluSp	SINE/Alu	2	306	(7)	3359224
15	14.4	0.0	0.0	chr6	28790694	28790718	(142015261)	+	(A)n	Simple_repeat	1	25	(0)	3359225
661	1.4	0.0	0.0	chr6	28790722	28790794	(142015185)	C	tRNA-Phe-TTY	tRNA	(3)	73	1	3359226
582	6.9	0.0	0.0	chr6	28795964	28796035	(142009944)	C	tRNA-Ala-GCY_	tRNA	(3)	72	1	3359235
2387	7.2	2.3	0.0	chr6	28796196	28796488	(142009491)	+	AluSg7	SINE/Alu	2	301	(8)	3359236
631	23.5	2.9	0.0	chr6	28803352	28803487	(142002492)	+	AluJo	SINE/Alu	134	273	(39)	3359251
18	0.0	0.0	0.0	chr6	28803489	28803511	(142002468)	+	(AAGC)n	Simple_repeat	1	23	(0)	3359252
47	24.6	0.7	3.5	chr6	28803519	28803658	(142002321)	+	G-rich	Low_complexity	1	141	(0)	3359253
661	1.4	0.0	0.0	chr6	28807833	28807905	(141998074)	C	tRNA-Phe-TTY	tRNA	(3)	73	1	3359263
11	20.2	2.9	0.0	chr6	28808212	28808245	(141997734)	+	(TTTCTT)n	Simple_repeat	1	35	(0)	3359264
544	18.8	5.9	0.0	chr6	28837370	28837481	(141968498)	C	MER5A1	DNA/hAT-Charlie	(3)	163	45	3359316
619	1.4	0.0	0.0	chr6	28863685	28863756	(141942223)	C	tRNA-Ala-GCY_	tRNA	(3)	72	1	3359354
668	1.3	0.0	0.0	chr6	28881388	28881462	(141924517)	+	tRNA-Arg-CGG	tRNA	1	75	(1)	3359379
221	35.9	1.9	0.0	chr6	28881562	28881664	(141924315)	C	L2c	LINE/L2	(6)	3381	3277	3359380
2564	4.0	1.0	0.3	chr6	28895821	28896121	(141909858)	C	AluY	SINE/Alu	(6)	305	3	3359410
619	1.2	0.0	21.5	chr6	28896222	28896328	(141909651)	C	tRNA-Leu-TTG	tRNA	(2)	84	1	3359411
194	16.3	0.0	8.5	chr6	28897263	28897309	(141908670)	+	L2a	LINE/L2	3366	3408	(18)	3359413
636	2.8	0.0	0.0	chr6	28941601	28941672	(141864307)	C	tRNA-Gln-CAG	tRNA	(3)	72	1	3359511
722	0.0	0.0	0.0	chr6	28943622	28943703	(141862276)	C	tRNA-Leu-CTY	tRNA	(3)	82	1	3359515
556	6.8	0.0	0.0	chr6	28944575	28944647	(141861332)	+	tRNA-Met_	tRNA	1	73	(3)	3359516
656	1.4	0.0	0.0	chr6	28951029	28951101	(141854878)	+	tRNA-Lys-AAA	tRNA	1	73	(3)	3359526
556	6.8	0.0	0.0	chr6	28953265	28953337	(141852642)	C	tRNA-Met_	tRNA	(3)	73	1	3359531
3386	14.4	14.2	0.8	chr6	28979629	28980258	(141825721)	+	LTR9A1	LTR/ERV1	1	728	(0)	3359571
624	0.0	0.0	0.0	chr6	28982199	28982270	(141823709)	+	tRNA-Glu-GAG_	tRNA	1	72	(3)	3359575
473	31.1	11.7	7.4	chr6	29016881	29017519	(141788460)	+	MamGypLTR3	LTR/Gypsy	208	877	(17)	3359639
391	16.9	3.5	2.4	chr6	29965034	29965118	(140840861)	+	LTR18B	LTR/ERVL	268	353	(261)	3360892
182	34.2	13.0	0.0	chr6	29965436	29965555	(140840424)	+	L3	LINE/CR1	3930	4067	(32)	3360893
5130	16.5	2.1	1.4	chr6	29967423	29967550	(140838429)	+	HERVP71A-int	LTR/ERV1	4493	4618	(2972)	3360889
1319	14.4	5.9	0.5	chr6	29967567	29967775	(140838204)	+	HERVP71A-int	LTR/ERV1	5243	5463	(2127)	3360889
4760	22.1	2.0	0.6	chr6	29967929	29968831	(140837148)	+	HERVP71A-int	LTR/ERV1	5938	6853	(737)	3360889
302	32.6	0.7	2.2	chr6	30326147	30326284	(140479695)	C	L2b	LINE/L2	(2)	3373	3238	3361433
3312	9.8	11.2	0.0	chr6	30495778	30496247	(140309732)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	3361684
203	37.3	8.3	6.2	chr6	30496248	30496311	(140309668)	C	L2a	LINE/L2	(218)	3169	3101	3361683
285	23.2	9.2	5.7	chr6	30496327	30496431	(140309548)	C	LTR67B	LTR/ERVL	(64)	556	448	3361685
1795	13.3	0.7	9.1	chr6	30516755	30517084	(140288895)	C	AluSx1	SINE/Alu	(10)	302	1	3361728
317	28.1	15.4	5.0	chr6	30673180	30673381	(140132598)	C	L2a	LINE/L2	(3)	3423	3197	3362001
11221	7.4	5.3	3.3	chr6	31195281	31196824	(139609155)	+	LTR12C	LTR/ERV1	4	1579	(0)	3362998
744	11.9	1.0	0.0	chr6	31196866	31196966	(139609013)	C	AluJb	SINE/Alu	(34)	278	177	3362999
2265	7.3	0.7	0.3	chr6	31400352	31400638	(139405341)	+	AluSp	SINE/Alu	1	288	(25)	3363278
47	0.0	0.0	0.0	chr6	31652321	31652360	(139153619)	+	(AC)n	Simple_repeat	1	40	(0)	3363672
347	30.7	7.4	2.5	chr6	31697793	31697977	(139108002)	C	L2a	LINE/L2	(43)	3383	3217	3363734
305	28.4	7.8	1.4	chr6	31697979	31698121	(139107858)	+	L1ME3Cz	LINE/L1	563	715	(282)	3363735
366	19.8	1.1	0.0	chr6	31698122	31698207	(139107772)	+	Kanga1c	DNA/TcMar-Tc2	1	87	(642)	3363736
541	13.1	3.5	0.0	chr6	31704016	31704099	(139101880)	+	FLAM_C	SINE/Alu	1	87	(56)	3363747
1533	13.6	6.7	7.3	chr6	31704100	31704401	(139101578)	+	AluJo	SINE/Alu	13	312	(0)	3363748
227	26.6	1.2	3.7	chr6	31704402	31704483	(139101496)	+	L1MD	LINE/L1	4476	4555	(1591)	3363749
13	26.2	5.5	0.0	chr6	31729337	31729391	(139076588)	+	(CCACT)n	Simple_repeat	1	58	(0)	3363791
14	19.8	2.3	2.3	chr6	31795863	31795905	(139010074)	+	(CGCAGGA)n	Simple_repeat	1	44	(0)	3363903
1147	8.3	8.2	0.0	chr6	31821465	31821621	(138984358)	+	AluJb	SINE/Alu	136	306	(6)	3363955
1887	13.1	5.0	1.7	chr6	31831664	31831953	(138974026)	+	AluSx	SINE/Alu	1	300	(12)	3363972
395	28.8	8.6	1.2	chr6	31833079	31833240	(138972739)	+	MER5B	DNA/hAT-Charlie	4	178	(0)	3363976
2256	11.4	0.3	1.6	chr6	31833246	31833561	(138972418)	+	AluSx1	SINE/Alu	1	312	(0)	3363977
2419	4.5	2.0	0.0	chr6	31833975	31834262	(138971717)	C	AluY	SINE/Alu	(17)	294	1	3363979
652	17.6	3.7	5.1	chr6	31834263	31834400	(138971579)	C	AluJb	SINE/Alu	(176)	136	1	3363975
14	10.4	3.0	2.9	chr6	31834405	31834437	(138971542)	+	(TTTTG)n	Simple_repeat	1	34	(0)	3363980
372	30.7	12.5	2.9	chr6	31863785	31863982	(138941997)	+	MIR	SINE/MIR	15	228	(34)	3364052
2346	8.3	1.0	1.3	chr6	31864064	31864375	(138941604)	C	AluSx1	SINE/Alu	(1)	311	1	3364053
1943	9.3	0.0	0.4	chr6	32131345	32131602	(138674377)	+	AluSx1	SINE/Alu	51	307	(5)	3364432
715	20.0	2.6	0.0	chr6	32131900	32132049	(138673930)	C	MER5A1	DNA/hAT-Charlie	(1)	165	12	3364433
908	13.5	0.7	0.0	chr6	32132057	32132189	(138673790)	C	FLAM_C	SINE/Alu	(8)	135	2	3364434
13	23.6	0.0	0.0	chr6	32154637	32154671	(138651308)	+	(CTG)n	Simple_repeat	1	35	(0)	3364477
2342	19.3	0.0	1.4	chr6	32255572	32255986	(138549993)	C	L1PA12	LINE/L1	(6566)	415	7	3364643
11	18.1	2.4	4.8	chr6	33161621	33161661	(137644318)	+	(AGGCGG)n	Simple_repeat	1	42	(0)	3365936
708	7.8	0.0	0.0	chr6	33199601	33199690	(137606289)	+	HY4	scRNA	1	90	(3)	3365968
17	15.3	0.0	0.0	chr6	33276840	33276868	(137529111)	+	(T)n	Simple_repeat	1	29	(0)	3366123
264	32.1	0.0	2.4	chr6	33632988	33633070	(137172909)	+	MIRc	SINE/MIR	158	238	(30)	3366889
199	37.6	1.1	1.1	chr6	34196853	34196954	(136609025)	C	MIR3	SINE/MIR	(118)	150	46	3367830
12	17.6	0.0	5.6	chr6	34237135	34237170	(136568809)	+	(GCG)n	Simple_repeat	1	36	(0)	3367936
13	26.5	2.2	0.0	chr6	34237361	34237405	(136568574)	+	(CGCC)n	Simple_repeat	1	46	(0)	3367937
442	29.7	7.4	3.3	chr6	34426333	34426513	(136379466)	C	L1ME4a	LINE/L1	(12)	6112	5924	3368361
25	25.1	0.9	6.2	chr6	34527180	34527290	(136278689)	+	G-rich	Low_complexity	1	112	(0)	3368607
200	31.4	3.3	9.2	chr6	34560225	34560354	(136245625)	+	L2c	LINE/L2	3049	3170	(217)	3368654
418	29.4	3.8	5.6	chr6	34560564	34560779	(136245200)	+	MIRc	SINE/MIR	18	229	(39)	3368655
19	25.7	4.9	1.2	chr6	35731935	35731962	(135074017)	+	(GGAGCG)n	Simple_repeat	1	83	(0)	3371022
19	0.0	0.0	0.0	chr6	36028792	36028812	(134777167)	+	(T)n	Simple_repeat	1	21	(0)	3371677
17	7.0	6.2	2.9	chr6	36661318	36661349	(134144630)	+	(AC)n	Simple_repeat	1	34	(0)	3373033
35	20.9	0.0	0.0	chr6	37170434	37170510	(133635469)	+	(CAGCCA)n	Simple_repeat	1	77	(0)	3374138
117	25.5	1.6	3.1	chr6	37204029	37204411	(133601568)	+	(ACACAA)n	Simple_repeat	1	389	(0)	3374229
1037	13.7	0.0	0.6	chr6	37204431	37204592	(133601387)	+	L1PA15	LINE/L1	5870	6030	(135)	3374230
17	21.1	0.0	7.8	chr6	37697623	37697686	(133108293)	+	(CGC)n	Simple_repeat	1	64	(0)	3375149
14	15.6	0.0	0.0	chr6	41073192	41073220	(129732759)	+	(GAGCC)n	Simple_repeat	1	29	(0)	3380581
2406	8.9	0.3	0.3	chr6	42027734	42028046	(128777933)	C	AluSp	SINE/Alu	(0)	313	1	3382373
625	28.9	6.9	1.5	chr6	42028047	42028171	(128777808)	+	MIRb	SINE/MIR	131	267	(1)	3382372
2580	5.6	0.0	0.3	chr6	42049031	42049336	(128756643)	C	AluSx	SINE/Alu	(7)	305	1	3382422
2091	10.7	0.0	0.0	chr6	42092417	42092707	(128713272)	C	AluSz6	SINE/Alu	(10)	302	12	3382513
219	19.7	7.0	7.0	chr6	42197433	42197503	(128608476)	+	L2a	LINE/L2	824	894	(2525)	3382770
920	17.5	3.5	0.0	chr6	42197504	42197669	(128608310)	+	MER5A	DNA/hAT-Charlie	16	187	(2)	3382771
1408	30.5	13.3	2.3	chr6	42197671	42198492	(128607487)	+	L2a	LINE/L2	906	1831	(1588)	3382770
14	39.3	1.1	1.1	chr6	43171522	43171610	(127634369)	+	(GCG)n	Simple_repeat	1	90	(0)	3384861
361	28.9	3.7	0.0	chr6	43271317	43271420	(127534559)	+	MER91C	DNA/hAT-Tip100	2	109	(31)	3385039
17	11.1	0.0	0.0	chr6	43454843	43454871	(127351108)	+	(GGAC)n	Simple_repeat	1	29	(0)	3385384
1258	14.0	0.0	0.0	chr6	43630760	43630938	(127175041)	+	AluSx3	SINE/Alu	133	311	(0)	3385711
2266	5.5	2.3	0.0	chr6	44218781	44219073	(126586906)	+	AluSp	SINE/Alu	1	300	(13)	3386807
13	14.9	5.1	2.4	chr6	45377470	45377508	(125428471)	+	(CAGCC)n	Simple_repeat	1	41	(0)	3388537
14	13.7	3.1	0.0	chr6	45377643	45377674	(125428305)	+	G-rich	Low_complexity	1	33	(0)	3388538
2888	6.7	0.3	0.0	chr6	49663935	49664309	(121141670)	+	L1PA7	LINE/L1	5508	5883	(271)	3394747
13607	12.2	2.9	0.9	chr6	49717615	49720336	(121085643)	C	PABL_A-int	LTR/ERV1	(2)	5944	2374	3394807
2993	0.3	0.0	0.3	chr6	52995620	52995951	(117810028)	+	7SK	RNA	1	331	(0)	3399374
13	20.1	1.7	8.2	chr6	63572479	63572538	(107233441)	+	(CGGCT)n	Simple_repeat	1	61	(0)	3410802
34	24.6	2.0	1.0	chr6	63572569	63572666	(107233313)	+	(GCC)n	Simple_repeat	1	100	(0)	3410803
279	25.8	9.0	5.7	chr6	67888748	67888887	(102917092)	C	HERVH-int	LTR/ERV1	(7336)	377	233	3416017
1477	24.3	8.7	1.0	chr6	67889062	67889473	(102916506)	C	LTR7C	LTR/ERV1	(0)	471	25	3416018
2288	10.8	4.5	0.0	chr6	70565869	70566164	(100239815)	C	AluSx	SINE/Alu	(2)	310	1	3419394
550	32.4	26.5	0.2	chr6	70566165	70566553	(100239426)	C	ERVL-E-int	LTR/ERVL	(2191)	3463	2952	3419390
2292	7.4	1.1	0.3	chr6	73514185	73514468	(97291511)	C	AluY	SINE/Alu	(24)	287	2	3423639
957	17.0	23.6	0.0	chr6	73514470	73514693	(97291286)	C	AluSc8	SINE/Alu	(18)	293	1	3423640
1390	11.7	18.6	0.0	chr6	73514694	73514933	(97291046)	C	AluSx4	SINE/Alu	(3)	307	13	3423641
2265	9.5	1.0	0.0	chr6	73523145	73523439	(97282540)	+	AluSz	SINE/Alu	1	298	(14)	3423646
239	29.3	6.0	4.3	chr6	79604391	79604521	(91201458)	+	MIRb	SINE/MIR	131	267	(1)	3431488
910	25.4	3.0	3.0	chr6	79604663	79604930	(91201049)	+	MLT1G1-int	LTR/ERVL-MaLR	1140	1407	(2)	3431489
960	16.9	0.0	0.7	chr6	85354991	85355138	(85450841)	C	AluJo	SINE/Alu	(30)	282	136	3438923
220	26.2	15.8	5.3	chr6	85355332	85355444	(85450535)	C	MIR3	SINE/MIR	(78)	130	4	3438924
13	10.4	2.9	5.6	chr6	85643759	85643793	(85162186)	+	(CGCGCC)n	Simple_repeat	1	36	(0)	3439347
2658	3.9	0.0	1.0	chr6	99515771	99516075	(71289904)	C	AluYm1	SINE/Alu	(8)	303	2	3457765
15	16.9	0.0	2.9	chr6	100881024	100881058	(69924921)	+	(CCT)n	Simple_repeat	1	35	(0)	3459592
13	20.8	0.0	0.0	chr6	100881277	100881309	(69924670)	+	(CAGA)n	Simple_repeat	1	33	(0)	3459593
227	37.8	2.7	1.4	chr6	105808852	105808996	(64996983)	+	L2c	LINE/L2	3183	3329	(58)	3465950
540	25.0	2.3	5.5	chr6	105904620	105904676	(64901303)	C	Charlie2b	DNA/hAT-Charlie	(603)	2179	2123	3466069
3123	16.5	5.8	0.0	chr6	105904677	105905245	(64900734)	+	MER6A	DNA/TcMar-Tigger	2	605	(0)	3466072
15	22.7	5.7	2.7	chr6	107028291	107028360	(63777619)	+	(CGCGC)n	Simple_repeat	1	74	(0)	3468022
12	17.9	3.1	0.0	chr6	107116056	107116087	(63689892)	+	(CACA)n	Simple_repeat	1	33	(0)	3468220
13	25.0	0.0	0.0	chr6	107116239	107116276	(63689703)	+	G-rich	Low_complexity	1	38	(0)	3468221
292	31.3	7.9	5.4	chr6	107317826	107318156	(63487823)	+	Charlie19a	DNA/hAT-Charlie	2	341	(45)	3468668
15	7.0	6.7	0.0	chr6	107459945	107459974	(63346005)	+	(TGGCAG)n	Simple_repeat	1	32	(0)	3468896
1299	33.5	6.3	1.5	chr6	109237180	109237975	(61568004)	C	L2b	LINE/L2	(757)	2662	1826	3471877
200	25.4	3.5	0.0	chr6	109383253	109383307	(61422672)	C	MIR3	SINE/MIR	(55)	153	97	3472068
27	22.9	3.4	5.0	chr6	110815172	110815241	(59990738)	+	(GCCGCCC)n	Simple_repeat	1	108	(13)	3474363
17	8.0	10.0	0.0	chr6	110815242	110815281	(59990698)	+	(CGCG)n	Simple_repeat	1	44	(0)	3474364
27	22.9	3.4	5.0	chr6	110815282	110815288	(59990691)	+	(GCCGCCC)n	Simple_repeat	109	121	(0)	3474363
1565	11.3	19.9	0.0	chr6	111251800	111252037	(59553942)	C	AluSz6	SINE/Alu	(15)	297	1	3475298
644	25.5	4.2	4.6	chr6	119324815	119325032	(51480947)	C	MER20	DNA/hAT-Charlie	(2)	217	1	3486461
789	26.3	6.2	4.3	chr6	119325056	119325309	(51480670)	C	MIR	SINE/MIR	(0)	262	4	3486462
211	40.0	3.3	4.9	chr6	125812598	125813065	(44992914)	+	L2	LINE/L2	2324	2783	(636)	3494856
16	14.5	0.0	0.0	chr6	130019614	130019644	(40786335)	+	(CACA)n	Simple_repeat	1	31	(0)	3500312
18	11.6	0.0	4.9	chr6	130019645	130019652	(40786327)	+	(CGCACA)n	Simple_repeat	3	41	(0)	3500313
1558	21.8	5.7	3.2	chr6	131657458	131657864	(39148115)	+	L1ME3A	LINE/L1	5727	6144	(29)	3502684
2073	11.8	3.2	0.7	chr6	131657882	131658185	(39147794)	+	AluSz6	SINE/Alu	1	312	(0)	3502686
260	19.1	0.0	0.0	chr6	132818725	132818771	(37987208)	+	SVA_B	Retroposon/SVA	197	243	(1140)	3504379
1715	11.8	12.9	0.4	chr6	132818862	132819132	(37986847)	C	AluSx	SINE/Alu	(2)	310	1	3504380
25	22.9	4.9	4.7	chr6	137866994	137867115	(32938864)	+	G-rich	Low_complexity	1	128	(0)	3512115
38	15.6	4.1	2.9	chr6	138987868	138987965	(31818014)	+	(CGGCTG)n	Simple_repeat	1	102	(0)	3513898
14	13.1	0.0	0.0	chr6	139135984	139136009	(31669970)	+	(GAAG)n	Simple_repeat	1	26	(0)	3514182
484	25.7	0.0	17.5	chr6	143844180	143844316	(26961663)	+	L2b	LINE/L2	3270	3382	(5)	3520512
731	4.8	0.0	0.0	chr6	144216547	144216629	(26589350)	+	tRNA-Leu-TTA	tRNA	1	83	(3)	3521045
223	27.2	15.6	2.6	chr6	145815054	145815170	(24990809)	C	MIR3	SINE/MIR	(60)	148	14	3523215
220	19.8	5.9	2.7	chr6	146892976	146893063	(23912916)	C	L2c	LINE/L2	(217)	3158	3075	3524642
257	24.5	15.9	0.0	chr6	146893144	146893249	(23912730)	+	MIR	SINE/MIR	46	171	(91)	3524643
532	32.4	4.9	4.6	chr6	147201568	147201829	(23604150)	C	MIRb	SINE/MIR	(3)	265	3	3525088
557	25.1	15.1	0.9	chr6	149728652	149728969	(21077010)	+	L2a	LINE/L2	2881	3245	(181)	3529035
2405	8.9	0.0	0.3	chr6	149728988	149729291	(21076688)	C	AluSx1	SINE/Alu	(9)	303	1	3529036
526	34.4	5.5	9.3	chr6	150150789	150151509	(20654470)	+	L2b	LINE/L2	2039	2730	(689)	3529758
568	26.9	4.5	5.4	chr6	150268655	150268878	(20537101)	C	MIR	SINE/MIR	(11)	251	30	3529941
184	14.3	0.0	0.0	chr6	150268942	150268976	(20537003)	C	L2b	LINE/L2	(103)	3272	3238	3529942
55	8.3	11.6	0.7	chr6	150268988	150269116	(20536863)	+	(ATGAT)n	Simple_repeat	1	144	(0)	3529943
24	21.4	3.0	1.4	chr6	151391468	151391582	(19414397)	+	(GCG)n	Simple_repeat	1	116	(0)	3531914
2125	9.4	1.0	6.4	chr6	156719245	156719574	(14086405)	C	AluSx1	SINE/Alu	(0)	312	1	3539890
11	27.2	2.0	2.0	chr6	156720216	156720265	(14085714)	+	(CGCGCTG)n	Simple_repeat	1	51	(0)	3539891
28	22.9	0.0	0.0	chr6	156720287	156720344	(14085635)	+	(AC)n	Simple_repeat	1	58	(0)	3539892
20	20.5	3.6	0.0	chr6	156777192	156777247	(14028732)	+	(CGGCCC)n	Simple_repeat	1	58	(0)	3539992
380	20.6	3.2	2.1	chr6	157221227	157221320	(13584659)	C	L1MC4a	LINE/L1	(0)	7882	7788	3540566
2606	25.8	11.7	1.3	chr6	157317057	157317930	(13488049)	+	L2	LINE/L2	1736	2712	(707)	3540704
2595	4.5	0.0	1.3	chr6	157515452	157515764	(13290215)	C	AluY	SINE/Alu	(2)	309	1	3541040
682	21.0	17.0	4.3	chr6	158704127	158704286	(12101693)	+	MER58B	DNA/hAT-Charlie	85	269	(72)	3542981
14	5.2	8.9	6.1	chr6	159692948	159692992	(11112987)	+	(GCGTCCCC)n	Simple_repeat	1	49	(0)	3544445
18	14.2	0.0	4.7	chr6	159970343	159970385	(10835594)	+	(CTGTTA)n	Simple_repeat	1	43	(0)	3544920
2150	14.3	12.2	1.5	chr6	159998986	159999388	(10806591)	C	LTR47A	LTR/ERVL	(0)	452	1	3544958
610	27.2	3.0	2.9	chr6	160138138	160138356	(10667623)	+	MIR	SINE/MIR	49	262	(0)	3545107
7125	9.7	5.0	1.4	chr6	161212842	161213911	(9592068)	+	MER4-int	LTR/ERV1	5475	6584	(14)	3546334
246	15.4	5.7	2.4	chr6	161374165	161374761	(9431218)	+	(GT)n	Simple_repeat	1	631	(0)	3546590
27	0.0	0.0	0.0	chr6	169702221	169702246	(1103733)	+	(CCCTGC)n	Simple_repeat	1	26	(0)	3556751
226	22.2	0.0	0.0	chr7	1460833	1460877	(157885096)	+	L3	LINE/CR1	3948	3992	(107)	3559944
453	15.9	0.0	0.0	chr7	2020763	2020825	(157325148)	C	AluJo	SINE/Alu	(16)	296	234	3560719
2349	11.2	0.0	0.0	chr7	2305352	2305663	(157040310)	C	AluSx1	SINE/Alu	(0)	312	1	3561095
2019	15.1	0.3	0.3	chr7	2402646	2402956	(156943017)	+	AluJr	SINE/Alu	1	311	(1)	3561337
591	25.9	3.5	2.4	chr7	2402975	2403144	(156942829)	C	MIRb	SINE/MIR	(14)	254	83	3561338
319	25.3	5.4	0.0	chr7	2717822	2717908	(156628065)	+	Tigger10	DNA/TcMar-Tigger	1713	1804	(40)	3561898
13	18.4	7.0	0.0	chr7	5423924	5423966	(153922007)	+	(CCCGGCC)n	Simple_repeat	1	46	(0)	3566998
18	25.1	1.4	5.3	chr7	5424138	5424160	(153921813)	+	(CCT)n	Simple_repeat	1	73	(0)	3566999
13	20.7	6.1	1.9	chr7	5424161	5424209	(153921764)	+	(CCCT)n	Simple_repeat	1	52	(0)	3567000
14	23.8	0.0	2.2	chr7	5424357	5424402	(153921571)	+	(CCCGGCC)n	Simple_repeat	1	46	(0)	3567001
290	25.9	3.2	3.5	chr7	5555734	5555854	(153790119)	+	MIR3	SINE/MIR	63	185	(83)	3567327
2133	11.9	0.0	0.3	chr7	5574004	5574297	(153771676)	C	AluSx	SINE/Alu	(19)	293	1	3567379
2539	4.2	0.3	2.6	chr7	6104073	6104380	(153241593)	C	AluSx3	SINE/Alu	(10)	301	1	3568622
1421	16.9	1.0	10.8	chr7	6104381	6104411	(153241562)	+	AluJo	SINE/Alu	271	300	(12)	3568621
2343	6.0	0.0	1.7	chr7	6373632	6373929	(152972044)	C	AluSc	SINE/Alu	(12)	297	5	3569226
2409	7.6	0.0	0.3	chr7	6373948	6374249	(152971724)	C	AluSq2	SINE/Alu	(7)	306	6	3569227
25	27.2	1.9	3.6	chr7	6374618	6374631	(152971342)	+	(GCCCCGC)n	Simple_repeat	1	105	(0)	3569229
21	17.1	5.6	6.4	chr7	6374632	6374720	(152971253)	+	(CGC)n	Simple_repeat	1	94	(0)	3569230
186	20.0	5.2	8.3	chr7	10939441	10939500	(148406473)	+	MamRTE1	LINE/RTE-BovB	2122	2179	(1633)	3575541
2800	17.8	3.2	12.9	chr7	16419266	16420033	(142925940)	+	LTR8	LTR/ERV1	1	691	(0)	3582433
2048	10.2	5.0	0.0	chr7	16565162	16565444	(142780529)	+	AluSq2	SINE/Alu	1	298	(15)	3582647
700	31.9	7.2	5.6	chr7	20219895	20220355	(139125618)	+	MLT1N2	LTR/ERVL-MaLR	93	561	(1)	3587458
31061	11.3	5.7	4.3	chr7	22806026	22808138	(136537835)	+	MER61-int	LTR/ERV1	3039	5214	(3)	3591237
25	6.7	3.8	5.5	chr7	23470542	23470594	(135875379)	+	GA-rich	Low_complexity	1	55	(0)	3592401
13	24.9	4.6	2.9	chr7	23474085	23474149	(135871824)	+	(GCCGC)n	Simple_repeat	1	68	(0)	3592403
474	24.1	12.3	2.5	chr7	24907337	24907523	(134438450)	+	MIRb	SINE/MIR	55	261	(1)	3594575
11	23.9	6.1	0.0	chr7	33062650	33062698	(126283275)	+	(GCGCTC)n	Simple_repeat	1	52	(0)	3607294
25	19.4	0.0	0.0	chr7	33062804	33062856	(126283117)	+	(CCCGC)n	Simple_repeat	1	53	(0)	3607295
12	19.7	0.0	0.0	chr7	38178317	38178345	(121167628)	+	(CCCCG)n	Simple_repeat	1	29	(0)	3614739
208	33.0	4.9	0.0	chr7	38178407	38178503	(121167470)	C	MIRc	SINE/MIR	(82)	186	85	3614740
14	26.1	2.0	0.0	chr7	39465066	39465115	(119880858)	+	A-rich	Low_complexity	1	51	(0)	3616543
23452	8.3	2.8	1.9	chr7	43074358	43076362	(116269611)	C	MER61-int	LTR/ERV1	(1555)	3662	1664	3622059
532	17.8	10.4	2.4	chr7	43925799	43925892	(115420081)	C	MER112	DNA/hAT-Charlie	(163)	98	1	3623461
387	23.9	11.0	2.1	chr7	44018772	44018912	(115327061)	+	MIRb	SINE/MIR	19	173	(95)	3623673
1936	9.4	5.9	1.1	chr7	44582848	44583123	(114762850)	+	AluJb	SINE/Alu	1	290	(22)	3624449
188	28.8	19.3	0.9	chr7	44885920	44886147	(114459826)	C	L2b	LINE/L2	(180)	3195	2916	3625086
447	6.6	0.0	10.6	chr7	48083019	48083103	(111262870)	C	L1PA6	LINE/L1	(0)	6154	6079	3629461
220	25.3	12.0	3.1	chr7	48083153	48083311	(111262662)	C	MIRb	SINE/MIR	(25)	243	69	3629462
220	28.4	2.9	1.5	chr7	56106796	56106863	(103239110)	+	MIR1_Amn	SINE/MIR	63	131	(99)	3639946
51583	14.8	1.2	1.3	chr7	64990916	64999343	(94346630)	C	HERV3-int	LTR/ERV1	(0)	8426	2	3647034
2902	14.3	7.2	6.8	chr7	64999344	64999936	(94346037)	C	LTR4	LTR/ERV1	(0)	596	1	3647034
1427	14.1	2.8	3.5	chr7	66739981	66740236	(92605737)	C	AluJr	SINE/Alu	(22)	290	37	3650716
263	28.6	6.7	1.2	chr7	66930483	66930567	(92415406)	C	L2a	LINE/L2	(1337)	2082	1993	3651127
527	35.0	3.8	0.9	chr7	72805694	72806027	(86539946)	C	L2	LINE/L2	(2511)	908	565	3663098
208	27.7	8.7	0.0	chr7	72806120	72806213	(86539760)	+	MIR	SINE/MIR	90	192	(70)	3663099
2336	9.4	0.0	0.3	chr7	72806238	72806536	(86539437)	C	AluSx1	SINE/Alu	(14)	298	1	3663100
2532	5.5	0.0	0.3	chr7	73433200	73433506	(85912467)	+	AluSq2	SINE/Alu	2	307	(6)	3664623
21	16.8	3.0	5.8	chr7	73557632	73557698	(85788275)	+	(CGC)n	Simple_repeat	1	69	(0)	3664904
35	5.0	1.4	6.8	chr7	73667848	73667919	(85678054)	+	(CGGAG)n	Simple_repeat	1	73	(0)	3665208
13	14.1	10.3	3.1	chr7	73667942	73667999	(85677974)	+	G-rich	Low_complexity	1	64	(0)	3665209
1857	12.6	0.0	4.2	chr7	74207006	74207314	(85138659)	+	AluJr	SINE/Alu	1	296	(16)	3666471
12	27.8	3.1	3.0	chr7	75073438	75073501	(84272472)	+	G-rich	Low_complexity	1	66	(0)	3668724
23	14.7	5.3	5.1	chr7	75073665	75073739	(84272234)	+	(GCCCCA)n	Simple_repeat	1	79	(0)	3668725
21	23.0	4.3	4.1	chr7	75527828	75527920	(83818053)	+	(CCGCCT)n	Simple_repeat	1	97	(0)	3669848
884	15.0	0.0	0.0	chr7	75663319	75663451	(83682522)	+	FRAM	SINE/Alu	2	134	(42)	3670183
1796	15.5	5.2	0.7	chr7	75739994	75740290	(83605683)	C	AluJr	SINE/Alu	(0)	312	2	3670392
15	24.5	0.0	3.9	chr7	76358446	76358497	(82987476)	+	(CCCGCG)n	Simple_repeat	1	52	(0)	3671937
1873	17.3	0.3	0.7	chr7	76388434	76388733	(82957240)	+	AluJr	SINE/Alu	2	300	(12)	3672029
2182	11.7	0.7	0.0	chr7	76388735	76389025	(82956948)	+	AluSx	SINE/Alu	1	293	(19)	3672030
3932	14.7	1.1	5.5	chr7	81161670	81162409	(78183564)	+	LTR62	LTR/ERVL	3	709	(0)	3679185
8102	8.9	2.8	0.1	chr7	87038527	87039756	(72306217)	+	L1MA2	LINE/L1	2725	3988	(2158)	3686702
27409	2.6	0.3	0.0	chr7	87039757	87045768	(72300205)	+	L1PA2	LINE/L1	124	6152	(3)	3686703
19	28.2	1.6	7.2	chr7	87876335	87876457	(71469516)	+	G-rich	Low_complexity	1	125	(0)	3687771
15	13.6	0.0	5.6	chr7	91264241	91264276	(68081697)	+	(TCC)n	Simple_repeat	1	36	(0)	3692226
18	22.7	0.0	0.0	chr7	91264494	91264539	(68081434)	+	(GGAGGC)n	Simple_repeat	1	46	(0)	3692227
16	31.2	0.0	0.0	chr7	92246063	92246121	(67099852)	+	(GGCGGT)n	Simple_repeat	1	59	(0)	3693578
13	24.4	4.2	0.0	chr7	92246093	92246140	(67099833)	+	G-rich	Low_complexity	1	50	(0)	3693579
24133	2.8	0.0	0.0	chr7	93586903	93591767	(65754206)	C	L1PA2	LINE/L1	(1154)	4992	127	3695445
210	35.0	1.2	0.0	chr7	94004724	94004803	(65341170)	C	MIR3	SINE/MIR	(31)	177	97	3696021
10342	12.1	4.3	2.1	chr7	97125454	97127258	(62218715)	C	L1PA8	LINE/L1	(4627)	1843	6	3700305
2173	11.3	0.0	0.0	chr7	99330306	99330614	(60015359)	C	AluSx1	SINE/Alu	(3)	309	1	3704496
24	15.4	1.5	6.1	chr7	99438954	99439018	(59906955)	+	(GGC)n	Simple_repeat	1	66	(0)	3704735
3297	7.2	2.3	2.5	chr7	99471161	99471603	(59874370)	+	L1PA8A	LINE/L1	5688	6129	(2)	3704800
2035	5.2	1.5	3.4	chr7	99471610	99471877	(59874096)	+	AluSx1	SINE/Alu	39	301	(11)	3704801
1561	14.9	8.7	3.4	chr7	99616160	99616454	(59729519)	+	AluJr	SINE/Alu	1	312	(0)	3705100
218	12.8	0.0	0.0	chr7	99616469	99616507	(59729466)	+	L2c	LINE/L2	3122	3160	(227)	3705101
12	14.4	0.0	0.0	chr7	99616509	99616532	(59729441)	+	(ACAC)n	Simple_repeat	1	24	(0)	3705102
210	26.9	5.1	1.1	chr7	99665514	99665607	(59680366)	C	L2c	LINE/L2	(45)	3342	3245	3705170
3272	10.9	1.4	1.4	chr7	99833185	99833666	(59512307)	C	LTR15	LTR/ERV1	(11)	482	1	3705357
18141	9.4	0.2	0.4	chr7	99833671	99836055	(59509918)	C	HERV15-int	LTR/ERV1	(5)	8730	6349	3705357
2371	6.0	1.0	0.7	chr7	100082302	100082600	(59263373)	+	AluSx1	SINE/Alu	1	300	(12)	3705822
3539	11.0	2.2	3.4	chr7	100082616	100083179	(59262794)	+	LTR43	LTR/ERV1	2	558	(44)	3705823
1049	16.2	16.7	1.2	chr7	100125669	100125761	(59220212)	+	AluJo	SINE/Alu	2	124	(188)	3705907
2355	8.1	0.0	2.6	chr7	100125762	100125904	(59220069)	+	AluSx1	SINE/Alu	1	143	(169)	3705908
2426	6.9	0.0	0.0	chr7	100125905	100126195	(59219778)	+	AluY	SINE/Alu	1	291	(20)	3705909
271	16.1	3.3	0.5	chr7	100580394	100580938	(58765035)	+	(CA)n	Simple_repeat	1	563	(0)	3706896
243	26.2	14.0	1.4	chr7	100642374	100642516	(58703457)	C	Charlie4z	DNA/hAT-Charlie	(3)	164	1	3707033
45	2.3	0.0	0.0	chr7	100673816	100673860	(58672113)	+	(CGC)n	Simple_repeat	1	45	(0)	3707120
1456	15.2	13.4	1.5	chr7	100706466	100706735	(58639238)	C	AluJo	SINE/Alu	(5)	307	1	3707180
217	19.3	13.6	0.0	chr7	100837604	100837660	(58508313)	C	L2a	LINE/L2	(50)	3376	3311	3707491
788	15.4	2.4	0.0	chr7	100874312	100874434	(58471539)	C	AluJo	SINE/Alu	(186)	126	1	3707555
1125	16.4	3.1	8.8	chr7	100875975	100876153	(58469820)	C	AluJr	SINE/Alu	(3)	309	128	3707556
2182	11.2	0.0	0.0	chr7	100876154	100876439	(58469534)	C	AluSx1	SINE/Alu	(14)	298	13	3707557
1125	16.4	3.1	8.8	chr7	100876440	100876497	(58469476)	C	AluJr	SINE/Alu	(185)	127	86	3707556
14	16.9	3.9	5.6	chr7	100896142	100896193	(58449780)	+	(GACA)n	Simple_repeat	1	54	(0)	3707588
15	22.8	7.5	2.3	chr7	100966449	100966481	(58379492)	+	(GGCGCT)n	Simple_repeat	1	52	(34)	3707725
16	11.6	0.0	0.0	chr7	100966482	100966509	(58379464)	+	(GCT)n	Simple_repeat	1	28	(0)	3707726
15	22.8	7.5	2.3	chr7	100966510	100966528	(58379445)	+	(GGCGCT)n	Simple_repeat	53	86	(0)	3707725
12	19.8	2.3	4.4	chr7	100966552	100966595	(58379378)	+	G-rich	Low_complexity	1	45	(0)	3707727
1645	13.7	5.6	8.0	chr7	101086125	101086280	(58259693)	+	AluJr	SINE/Alu	4	137	(175)	3707965
2395	9.9	0.0	0.0	chr7	101086281	101086584	(58259389)	+	AluSx	SINE/Alu	3	306	(6)	3707966
218	25.0	14.0	4.8	chr7	101252159	101252242	(58093731)	+	L2c	LINE/L2	3294	3386	(1)	3708330
232	30.8	5.1	1.5	chr7	102081087	102081218	(57264755)	+	L2	LINE/L2	2148	2284	(1135)	3710262
533	26.9	10.7	3.7	chr7	102081219	102081316	(57264657)	+	L2	LINE/L2	2434	2550	(869)	3710262
2304	17.6	7.6	1.1	chr7	102420704	102421168	(56924805)	+	Tigger4	DNA/TcMar-Tigger	1	498	(2233)	3710970
12	23.8	1.8	5.4	chr7	105387935	105387989	(53957984)	+	(CCCGCG)n	Simple_repeat	1	56	(0)	3715693
12	15.4	5.3	2.5	chr7	106660255	106660292	(52685681)	+	(GCGCT)n	Simple_repeat	1	40	(0)	3717896
12	23.8	3.9	1.9	chr7	106660827	106660877	(52685096)	+	(CGCCGC)n	Simple_repeat	1	53	(0)	3717897
298	36.6	5.1	1.4	chr7	106952609	106952816	(52393157)	+	MIRc	SINE/MIR	34	249	(19)	3718317
2529	11.5	0.0	0.0	chr7	107008605	107008916	(52337057)	C	AluSx	SINE/Alu	(0)	312	1	3718437
2218	10.3	5.1	0.0	chr7	107010443	107010723	(52335250)	C	AluSz	SINE/Alu	(11)	301	6	3718439
816	18.4	1.8	0.6	chr7	107130930	107131093	(52214880)	C	MER5A1	DNA/hAT-Charlie	(0)	166	1	3718642
202	29.3	8.5	1.3	chr7	107564931	107565006	(51780967)	C	MIR	SINE/MIR	(25)	237	156	3719259
368	29.9	14.4	8.3	chr7	107580185	107580571	(51765402)	C	L1M4b	LINE/L1	(6263)	604	190	3719278
360	32.6	10.6	0.7	chr7	108568712	108568856	(50777117)	C	MIR	SINE/MIR	(100)	162	2	3720736
350	23.9	10.3	9.7	chr7	108568976	108569119	(50776854)	+	MIRc	SINE/MIR	46	191	(77)	3720737
1985	13.7	0.7	0.3	chr7	111484800	111485083	(47860890)	C	AluJb	SINE/Alu	(23)	289	5	3724391
12	29.0	2.0	0.0	chr7	111562247	111562296	(47783677)	+	(CACGCG)n	Simple_repeat	1	51	(0)	3724507
13	18.4	0.0	0.0	chr7	112939646	112939676	(46406297)	+	(CTGCTC)n	Simple_repeat	1	31	(0)	3726479
19	15.6	2.2	2.2	chr7	112939728	112939797	(46406176)	+	(CGC)n	Simple_repeat	1	70	(0)	3726480
15	30.3	0.0	1.7	chr7	112939807	112939864	(46406109)	+	GA-rich	Low_complexity	1	58	(0)	3726481
27	2.4	4.3	4.2	chr7	116950248	116950293	(42395680)	+	(CCTT)n	Simple_repeat	1	48	(0)	3731844
64	36.5	4.4	0.0	chr7	116950294	116950587	(42395386)	+	(CTCT)n	Simple_repeat	4	310	(0)	3731845
55	6.8	2.5	0.0	chr7	116950588	116950666	(42395307)	+	(TTCC)n	Simple_repeat	1	81	(0)	3731846
393	32.9	15.1	1.4	chr7	116952981	116953196	(42392777)	+	MIR	SINE/MIR	8	258	(4)	3731851
25	25.4	5.7	0.9	chr7	116953370	116953474	(42392499)	+	(CGGCCG)n	Simple_repeat	1	111	(0)	3731852
17	19.2	0.0	0.0	chr7	117873334	117873369	(41472604)	+	(CCG)n	Simple_repeat	1	36	(0)	3733127
22	11.5	0.0	0.0	chr7	117873506	117873543	(41472430)	+	(CCGGGAG)n	Simple_repeat	1	38	(0)	3733128
1524	21.3	3.4	4.5	chr7	119906459	119906797	(39439176)	C	L1MA5	LINE/L1	(0)	6300	5967	3735707
2551	4.7	3.2	0.0	chr7	119906798	119907096	(39438877)	C	AluYk4	SINE/Alu	(1)	310	2	3735708
4279	19.8	2.2	1.4	chr7	121038602	121039507	(38306466)	C	L1MC3	LINE/L1	(172)	7613	6701	3737147
260	25.0	5.9	0.0	chr7	121076654	121076717	(38269256)	C	MamTip3	DNA/hAT-Tip100	(398)	102	35	3737200
215	29.3	8.9	1.2	chr7	123719072	123719154	(35626819)	C	L3	LINE/CR1	(351)	3748	3659	3740857
419	29.5	13.4	4.2	chr7	123719358	123719430	(35626543)	+	L2c	LINE/L2	3065	3145	(242)	3740859
2822	11.4	1.8	2.4	chr7	123719431	123719881	(35626092)	+	MER83	LTR/ERV1	1	448	(0)	3740860
1825	14.1	3.2	3.2	chr7	127650847	127651158	(31694815)	+	AluJb	SINE/Alu	1	312	(0)	3746060
325	32.4	13.2	3.6	chr7	127651159	127651207	(31694766)	C	L2	LINE/L2	(2917)	502	456	3746053
224	27.9	11.7	0.0	chr7	127651201	127651268	(31694705)	+	MIRb	SINE/MIR	186	262	(6)	3746051
232	33.5	2.4	2.1	chr7	128456325	128456417	(30889556)	+	L2b	LINE/L2	3304	3425	(1)	3747273
902	4.7	0.0	0.0	chr7	128697452	128697558	(30648415)	+	5S	rRNA	15	121	(0)	3747813
445	3.7	0.0	0.0	chr7	128697691	128697744	(30648229)	+	5S	rRNA	3	56	(65)	3747814
1078	20.3	12.3	1.3	chr7	128697902	128698205	(30647768)	+	MER20B	DNA/hAT-Charlie	440	781	(2)	3747815
12	13.7	0.0	0.0	chr7	128783387	128783410	(30562563)	+	(CTG)n	Simple_repeat	1	24	(0)	3747962
653	0.0	0.0	0.0	chr7	128783450	128783521	(30562452)	+	tRNA-Pro-CCY	tRNA	1	72	(3)	3747963
2550	24.4	6.1	2.9	chr7	129438570	129439284	(29906689)	C	MER21C	LTR/ERVL	(78)	860	122	3749152
14	21.3	2.2	2.2	chr7	129779713	129779779	(29566194)	+	(GCCCC)n	Simple_repeat	1	67	(0)	3749819
233	23.7	1.7	0.0	chr7	129785194	129785252	(29560721)	+	Charlie24	DNA/hAT-Charlie	2380	2439	(11)	3749827
401	29.1	10.1	4.4	chr7	129785406	129785563	(29560410)	+	MIRc	SINE/MIR	74	241	(27)	3749828
26	0.0	0.0	0.0	chr7	134646898	134646922	(24699051)	+	(GCT)n	Simple_repeat	1	25	(0)	3757795
26	25.8	1.3	1.3	chr7	135509714	135509790	(23836183)	+	GA-rich	Low_complexity	1	78	(0)	3759070
348	28.3	8.5	4.4	chr7	135557206	135557386	(23788587)	+	L1MC5	LINE/L1	9108	9296	(8)	3759181
27	8.7	0.0	0.0	chr7	135893051	135893087	(23452886)	+	(T)n	Simple_repeat	1	37	(0)	3759765
2025	14.9	0.4	0.0	chr7	135893122	135893396	(23452577)	C	AluSz6	SINE/Alu	(6)	306	31	3759766
186	34.9	0.0	0.0	chr7	137991979	137992041	(21353932)	+	MamRTE1	LINE/RTE-BovB	193	255	(3557)	3762709
1386	25.3	4.7	4.2	chr7	138257403	138257858	(21088115)	C	MER61E	LTR/ERV1	(208)	571	85	3763227
14	16.1	0.0	0.0	chr7	138460459	138460486	(20885487)	+	GA-rich	Low_complexity	1	28	(0)	3763675
15	4.3	4.2	0.0	chr7	138461132	138461155	(20884818)	+	(CCG)n	Simple_repeat	1	25	(0)	3763677
13579	14.5	4.8	2.8	chr7	138929961	138931352	(20414621)	C	Tigger1	DNA/TcMar-Tigger	(938)	1480	23	3764563
2086	5.2	10.3	0.0	chr7	139091218	139091486	(20254487)	+	AluY	SINE/Alu	1	300	(11)	3764898
630	2.8	0.0	0.0	chr7	139340700	139340771	(20005202)	+	tRNA-Arg-AGG	tRNA	1	72	(4)	3765383
282	24.7	5.1	2.1	chr7	139434759	139434853	(19911120)	+	MIRc	SINE/MIR	2	99	(169)	3765587
305	32.7	7.8	4.7	chr7	139434859	139435097	(19910876)	C	MIRb	SINE/MIR	(1)	261	18	3765588
25	20.6	1.6	0.0	chr7	139631393	139631454	(19714519)	+	A-rich	Low_complexity	1	63	(0)	3765953
1993	24.3	6.2	1.4	chr7	140322629	140323213	(19022760)	C	MER74B	LTR/ERVL	(7)	615	1	3767171
19	24.8	2.1	6.1	chr7	140924604	140924699	(18421274)	+	(CGGCGC)n	Simple_repeat	1	98	(0)	3768435
359	29.1	11.0	6.2	chr7	142404720	142405107	(16940866)	+	L1MC4	LINE/L1	7254	7662	(380)	3770598
12	25.8	5.5	0.0	chr7	143380491	143380545	(15965428)	+	(GCAGTCC)n	Simple_repeat	1	58	(0)	3771836
11	25.1	0.0	4.3	chr7	143380536	143380581	(15965392)	+	(CGGCCC)n	Simple_repeat	1	46	(0)	3771837
2537	6.4	0.0	0.3	chr7	144836403	144836699	(14509274)	+	AluSx3	SINE/Alu	1	296	(15)	3773751
27846	2.5	0.0	0.1	chr7	146013559	146019592	(13326381)	C	L1PA2	LINE/L1	(0)	6155	125	3775353
384	31.1	6.6	0.7	chr7	146019590	146019861	(13326112)	C	L1MEg	LINE/L1	(5318)	766	478	3775350
2204	11.3	1.0	0.0	chr7	148881655	148881946	(10464027)	+	AluSz	SINE/Alu	1	295	(17)	3779536
36	8.9	0.0	0.0	chr7	148881952	148882000	(10463973)	+	(AC)n	Simple_repeat	1	49	(0)	3779537
2252	11.1	0.7	0.0	chr7	148917983	148918280	(10427693)	C	AluSx3	SINE/Alu	(11)	300	1	3779604
1029	0.0	0.0	0.0	chr7	148987137	148987248	(10358725)	C	HY1	scRNA	(7)	112	1	3779772
403	28.8	4.3	1.6	chr7	149496886	149497034	(9848939)	+	MIR	SINE/MIR	71	231	(37)	3780778
470	28.9	3.2	3.9	chr7	149623928	149624082	(9721891)	+	MIRb	SINE/MIR	78	231	(37)	3780952
627	4.1	0.0	0.0	chr7	149691180	149691252	(9654721)	C	tRNA-Cys-TGY	tRNA	(2)	73	1	3781036
973	13.1	0.7	0.0	chr7	149761255	149761407	(9584566)	+	L1MB4	LINE/L1	6027	6180	(0)	3781146
12	20.0	5.3	5.0	chr7	149873609	149873665	(9472308)	+	(CGGCG)n	Simple_repeat	1	60	(0)	3781258
771	23.0	7.4	0.5	chr7	150303977	150304177	(9041796)	+	HAL1	LINE/L1	2	217	(2290)	3781847
1391	27.6	16.2	1.6	chr7	150305590	150306332	(9039641)	C	Charlie13a	DNA/hAT-Charlie	(641)	873	2	3781846
471	30.7	4.7	1.6	chr7	150898872	150899119	(8446854)	C	MLT1J	LTR/ERVL-MaLR	(112)	400	145	3782618
343	18.4	16.3	6.4	chr7	151008469	151008578	(8337395)	C	MIRb	SINE/MIR	(22)	246	124	3782781
173	26.0	3.1	2.9	chr7	151398081	151398216	(7947757)	+	(GTGTAT)n	Simple_repeat	1	134	(0)	3783370
32	0.0	8.2	1.9	chr7	151398217	151398265	(7947708)	+	(TGTGTGTGCTA)n	Simple_repeat	1	53	(0)	3783371
173	26.0	3.1	2.9	chr7	151398266	151398737	(7947236)	+	(GTGTAT)n	Simple_repeat	3	477	(0)	3783372
19	14.8	5.4	3.4	chr7	151519191	151519246	(7826727)	+	(CCCG)n	Simple_repeat	1	59	(0)	3783576
18	29.5	0.0	5.5	chr7	151519551	151519641	(7826332)	+	(GCGGCG)n	Simple_repeat	1	91	(0)	3783577
29	0.0	0.0	0.0	chr7	152436749	152436775	(6909198)	+	(CTCCGG)n	Simple_repeat	1	27	(0)	3785122
20	24.6	2.8	6.3	chr7	152464192	152464299	(6881674)	+	(GCCGGCC)n	Simple_repeat	1	111	(0)	3785186
1857	9.2	2.4	0.4	chr7	152676604	152676852	(6669121)	+	AluSz	SINE/Alu	50	303	(9)	3785719
762	26.9	7.2	0.5	chr7	154672776	154672984	(4672989)	C	MER58A	DNA/hAT-Charlie	(0)	224	1	3788596
4089	5.9	1.7	0.4	chr7	154676662	154677185	(4668788)	C	HERV1_LTRd	LTR/ERV1	(4)	531	1	3788600
732	17.6	5.8	2.2	chr7	155004958	155005091	(4340882)	+	Tigger4b	DNA/TcMar-Tigger	2	140	(221)	3789018
809	13.6	3.1	0.0	chr7	155005092	155005216	(4340757)	+	FLAM_A	SINE/Alu	1	129	(13)	3789019
155	24.9	0.3	0.5	chr7	155205936	155206308	(4139665)	+	(TG)n	Simple_repeat	1	374	(0)	3789350
1822	21.2	1.6	0.0	chr7	155206325	155206544	(4139429)	C	MLT1B	LTR/ERVL-MaLR	(2)	388	166	3789351
190	37.5	0.0	0.0	chr7	155234201	155234264	(4111709)	C	MIRc	SINE/MIR	(44)	224	161	3789392
1412	20.2	2.3	6.9	chr7	155736991	155737352	(3608621)	+	Tigger3a	DNA/TcMar-Tigger	3	347	(1)	3790051
758	26.9	9.1	1.9	chr7	157273180	157273444	(2072529)	+	L2a	LINE/L2	3141	3426	(0)	3792171
718	24.4	3.8	0.9	chr7	158830063	158830293	(515680)	C	MER65A	LTR/ERV1	(207)	238	1	3793758
375	21.6	5.8	1.0	chr7	158864156	158864253	(481720)	C	LTR56	LTR/ERV1	(342)	103	1	3793810
1724	13.2	3.0	4.0	chr8	2727654	2728209	(142410427)	+	LTR12C	LTR/ERV1	3	596	(983)	3797219
345	40.7	4.9	0.0	chr8	2788241	2788471	(142350165)	C	MIR	SINE/MIR	(6)	256	14	3797284
253	17.1	0.0	0.0	chr8	2788592	2788632	(142350004)	+	MLT1H	LTR/ERVL-MaLR	240	280	(269)	3797285
594	30.8	10.2	3.7	chr8	2788925	2789410	(142349226)	+	L1ME4a	LINE/L1	5326	5846	(278)	3797286
1024	25.5	3.0	11.5	chr8	6428757	6429235	(138709401)	C	HAL1	LINE/L1	(19)	2488	2052	3802067
21	14.6	0.0	0.0	chr8	19817439	19817476	(125321160)	+	(GCG)n	Simple_repeat	1	38	(0)	3821835
36	8.7	0.0	0.0	chr8	22060384	22060432	(123078204)	+	(CT)n	Simple_repeat	1	49	(0)	3825504
18	21.0	0.0	0.0	chr8	22060438	22060472	(123078164)	+	(CA)n	Simple_repeat	1	35	(0)	3825505
14	22.0	2.0	3.9	chr8	22367197	22367247	(122771389)	+	G-rich	Low_complexity	1	52	(0)	3826083
252	29.6	1.4	0.0	chr8	22901030	22901100	(122237536)	+	Tigger15a	DNA/TcMar-Tigger	392	463	(252)	3827007
182	27.9	10.5	0.0	chr8	22901362	22901429	(122237207)	C	L2a	LINE/L2	(38)	3388	3313	3827008
14	10.6	13.2	1.7	chr8	23494338	23494390	(121644246)	+	(CAGCTGG)n	Simple_repeat	1	60	(0)	3828018
15	0.0	0.0	0.0	chr8	30156938	30156954	(114981682)	+	(AC)n	Simple_repeat	1	17	(0)	3839162
3127	15.9	3.2	5.1	chr8	30156958	30157588	(114981048)	C	L1PB4	LINE/L1	(12)	6144	5526	3839163
847	7.4	0.0	0.0	chr8	33513474	33513581	(111625055)	+	U13	snRNA	1	108	(0)	3844636
1912	9.7	7.3	0.4	chr8	33513741	33514019	(111624617)	C	AluSc	SINE/Alu	(9)	300	1	3844637
5264	19.9	5.7	3.7	chr8	37923851	37924796	(107213840)	C	L1M4	LINE/L1	(6296)	1221	254	3851221
1977	13.0	4.0	0.0	chr8	37924797	37925081	(107213555)	C	AluSx1	SINE/Alu	(15)	297	1	3851228
41	2.6	0.0	0.0	chr8	38798607	38798646	(106339990)	+	(GT)n	Simple_repeat	1	40	(0)	3852994
3655	10.6	4.8	0.2	chr8	39004567	39005088	(106133548)	C	MER41B	LTR/ERV1	(87)	547	1	3853363
2062	13.7	0.0	1.0	chr8	41793095	41793407	(103345229)	+	AluJo	SINE/Alu	1	310	(2)	3857597
287	33.3	2.0	0.0	chr8	41793472	41793570	(103345066)	C	L2b	LINE/L2	(557)	2862	2762	3857596
230	23.1	7.1	1.3	chr8	41793601	41793679	(103344957)	+	Chap1_Mam	DNA/hAT-Charlie	121	204	(138)	3857598
449	27.2	7.2	2.0	chr8	42139662	42139860	(102998776)	C	L1ME4b	LINE/L1	(236)	656	447	3858210
22	12.7	9.6	2.5	chr8	42541714	42541786	(102596850)	+	(CCCCGCGT)n	Simple_repeat	1	80	(0)	3858983
15	19.9	0.0	0.0	chr8	42541757	42541791	(102596845)	+	(CCCGG)n	Simple_repeat	1	35	(0)	3858984
19312	7.7	3.5	2.8	chr8	43136889	43137949	(102000687)	+	MER61-int	LTR/ERV1	3064	4088	(1129)	3860173
2551	15.2	1.4	0.5	chr8	47557872	47558307	(97580329)	+	L1PA17	LINE/L1	5711	6150	(16)	3862062
20	17.7	4.3	4.2	chr8	47659595	47659663	(97478973)	+	(GCCCCC)n	Simple_repeat	1	72	(0)	3862216
3317	15.0	2.9	1.1	chr8	49230597	49231163	(95907473)	C	MER34D	LTR/ERV1	(1)	578	1	3864188
3794	19.5	4.3	1.6	chr8	53944746	53945626	(91193010)	+	L1MB7	LINE/L1	5270	6175	(9)	3870182
2422	8.3	0.0	0.3	chr8	54022731	54023018	(91115618)	C	AluSc	SINE/Alu	(21)	288	2	3870337
1776	9.4	2.0	0.0	chr8	60516181	60516425	(84622211)	C	AluSx	SINE/Alu	(2)	310	61	3879291
543	0.0	0.0	21.5	chr8	66113367	66113459	(79025177)	+	tRNA-Tyr-TAC	tRNA	1	73	(3)	3886877
28	0.0	0.0	0.0	chr8	70668749	70668775	(74469861)	+	(T)n	Simple_repeat	1	27	(0)	3894217
207	39.4	4.5	1.2	chr8	71831482	71831653	(73306983)	+	L2c	LINE/L2	2541	2718	(701)	3895734
16	19.8	1.7	6.6	chr8	73294989	73295048	(71843588)	+	(GCCG)n	Simple_repeat	1	61	(0)	3897760
614	27.2	3.2	5.3	chr8	81686779	81686823	(63451813)	C	MIRb	SINE/MIR	(11)	257	218	3909617
2232	9.9	3.0	0.0	chr8	81686824	81687117	(63451519)	C	AluSq2	SINE/Alu	(10)	303	1	3909618
751	23.7	5.9	1.6	chr8	90221370	90221562	(54917074)	C	LTR16C	LTR/ERVL	(12)	477	276	3920907
683	30.3	5.5	1.9	chr8	90221581	90221792	(54916844)	C	LTR16C	LTR/ERVL	(269)	220	1	3920907
788	0.0	0.0	0.0	chr8	95269657	95269738	(49868898)	C	tRNA-Ser-TCY	tRNA	(3)	82	1	3928507
32	3.2	0.0	0.0	chr8	95269957	95269988	(49868648)	+	(GA)n	Simple_repeat	1	32	(0)	3928508
208	32.8	3.1	6.0	chr8	96235040	96235159	(48903477)	+	MIRb	SINE/MIR	110	241	(21)	3929959
2504	6.0	0.3	0.3	chr8	97775242	97775543	(47363093)	+	AluSq2	SINE/Alu	1	302	(11)	3932411
14	28.8	4.1	1.3	chr8	97776270	97776342	(47362294)	+	G-rich	Low_complexity	1	76	(0)	3932413
3742	8.6	5.7	0.8	chr8	97778363	97778898	(47359738)	+	LTR6A	LTR/ERV1	1	564	(0)	3932416
13	21.3	0.0	0.0	chr8	99012974	99013006	(46125630)	+	(GCCGCA)n	Simple_repeat	1	33	(0)	3934592
15	9.7	0.0	0.0	chr8	100150590	100150611	(44988025)	+	(AG)n	Simple_repeat	1	22	(0)	3936243
473	32.0	12.1	0.5	chr8	100150988	100151185	(44987451)	+	MIRb	SINE/MIR	27	250	(18)	3936244
16	8.7	0.0	0.0	chr8	100951980	100952004	(44186632)	+	(GGC)n	Simple_repeat	1	25	(0)	3937835
410	13.3	0.0	0.0	chr8	102591393	102591452	(42547184)	C	FLAM_A	SINE/Alu	(10)	132	73	3940695
250	22.2	0.0	0.0	chr8	102591449	102591493	(42547143)	C	AluSx3	SINE/Alu	(132)	179	135	3940696
272	23.3	3.7	8.8	chr8	102811260	102811372	(42327264)	C	L1ME4a	LINE/L1	(66)	6058	5952	3941155
13	18.9	6.0	1.9	chr8	104589053	104589102	(40549534)	+	(GCCGCCC)n	Simple_repeat	1	53	(0)	3943937
346	24.5	1.1	7.8	chr8	104665310	104665411	(40473225)	C	MIRb	SINE/MIR	(96)	172	78	3944050
634	19.6	0.9	0.0	chr8	104665479	104665590	(40473046)	C	MER81	DNA/hAT-Blackjack	(1)	113	1	3944051
231	21.5	7.2	5.8	chr8	123167041	123167109	(21971527)	+	L2c	LINE/L2	3294	3365	(61)	3971305
20	17.9	1.9	1.9	chr8	123241150	123241201	(21897435)	+	G-rich	Low_complexity	1	53	(0)	3971459
13	8.5	0.0	3.7	chr8	123395308	123395334	(21743302)	+	(GGGGA)n	Simple_repeat	1	27	(0)	3971767
265	31.4	17.5	0.7	chr8	123395476	123395613	(21743023)	+	MIR	SINE/MIR	20	185	(77)	3971768
303	35.4	5.3	0.0	chr8	124539424	124539621	(20599015)	+	MIRb	SINE/MIR	48	256	(12)	3973889
261	11.1	0.0	8.5	chr8	124688157	124688215	(20450421)	+	MER4-int	LTR/ERV1	1112	1165	(5433)	3974135
90	22.5	2.9	0.0	chr8	124688216	124688423	(20450213)	+	(TG)n	Simple_repeat	1	214	(0)	3974136
908	28.2	7.6	4.3	chr8	124736143	124736628	(20402008)	C	LTR33	LTR/ERVL	(10)	505	3	3974216
301	30.8	11.6	2.5	chr8	124830758	124830811	(20307825)	C	L1ME4b	LINE/L1	(527)	365	310	3974436
269	35.6	3.3	1.4	chr8	124830812	124830959	(20307677)	C	MIRb	SINE/MIR	(111)	157	7	3974438
478	40.3	0.7	2.4	chr8	124954445	124954741	(20183895)	C	MamRTE1	LINE/RTE-BovB	(1053)	2759	2468	3974670
226	32.2	8.2	10.6	chr8	125312776	125313001	(19825635)	C	L2b	LINE/L2	(162)	3213	2994	3975308
828	9.0	0.0	1.8	chr8	125313002	125313114	(19825522)	+	L1PA8	LINE/L1	6058	6168	(4)	3975309
63	22.9	2.9	1.7	chr8	125313116	125313287	(19825349)	+	GA-rich	Low_complexity	1	177	(0)	3975310
14	26.0	1.7	3.3	chr8	125430092	125430171	(19708465)	+	(CCCCTCT)n	Simple_repeat	1	78	(0)	3975579
21	14.6	0.0	0.0	chr8	125430292	125430329	(19708307)	+	(AGG)n	Simple_repeat	1	38	(0)	3975580
13	24.1	1.7	5.0	chr8	126558530	126558588	(18580048)	+	(CCCCGC)n	Simple_repeat	1	60	(0)	3977739
118	13.2	0.9	2.3	chr8	127897456	127897669	(17240967)	+	GA-rich	Low_complexity	1	216	(0)	3980353
321	30.0	15.2	6.0	chr8	127897670	127897953	(17240683)	+	HAL1	LINE/L1	880	1194	(1313)	3980354
1410	18.0	0.3	1.1	chr8	128207568	128207854	(16930782)	C	L1MA4	LINE/L1	(1)	6299	6015	3981032
326	29.1	6.6	2.3	chr8	128207925	128208054	(16930582)	+	MIR	SINE/MIR	41	176	(86)	3981033
1497	21.9	2.7	3.8	chr8	128208071	128208325	(16930311)	C	MER58B	DNA/hAT-Charlie	(4)	337	86	3981034
392	31.9	4.0	1.2	chr8	131904853	131905020	(13233616)	+	MER5A	DNA/hAT-Charlie	16	188	(1)	3987617
346	24.1	6.1	10.7	chr8	140464199	140464319	(4674317)	+	L2b	LINE/L2	3260	3374	(1)	4002004
985	24.8	2.9	0.0	chr8	141021578	141021815	(4116821)	C	MIR	SINE/MIR	(5)	257	13	4003012
931	27.7	3.9	0.7	chr8	143195087	143195431	(1943205)	+	L1MEg2	LINE/L1	67	597	(5855)	4005891
7686	5.6	3.2	0.0	chr8	143195432	143196486	(1942150)	+	HERVL-int	LTR/ERVL	4565	5654	(0)	4005892
2275	11.0	0.0	3.1	chr8	143454074	143454390	(1684246)	C	AluSq	SINE/Alu	(6)	307	1	4006239
1830	18.3	3.9	6.4	chr8	143454391	143454402	(1684234)	+	Tigger7	DNA/TcMar-Tigger	110	110	(2381)	4006238
2338	7.8	0.0	3.6	chr8	143454403	143454710	(1683926)	C	AluY	SINE/Alu	(14)	297	1	4006240
14	23.1	0.0	4.1	chr8	144332389	144332437	(806199)	+	G-rich	Low_complexity	1	49	(0)	4007459
2640	3.9	0.0	0.0	chr8	144428784	144429088	(709548)	C	AluY	SINE/Alu	(6)	305	1	4007614
13	14.7	3.3	0.0	chr8	144853441	144853470	(285166)	+	(GGAGC)n	Simple_repeat	1	31	(0)	4008203
411	15.9	5.8	2.3	chr8	144853539	144853640	(284996)	C	LTR54	LTR/ERV1	(391)	107	1	4008204
578	20.0	10.3	0.0	chr9	4865625	4865729	(133528988)	C	AluSz6	SINE/Alu	(194)	118	2	4015787
180	36.3	5.1	4.5	chr9	13268575	13268750	(125125967)	C	L2c	LINE/L2	(191)	3196	3020	4027377
17	22.0	5.0	1.6	chr9	15510935	15510994	(122883723)	+	(CCG)n	Simple_repeat	1	63	(0)	4030658
2435	14.3	4.5	1.4	chr9	33560111	33560539	(104834178)	C	MER61C	LTR/ERV1	(0)	428	1	4055668
12	12.8	5.6	2.6	chr9	34652039	34652074	(103742643)	+	(GGTGGA)n	Simple_repeat	1	38	(0)	4057743
23	17.4	2.9	4.2	chr9	34652148	34652217	(103742500)	+	(GCGAGG)n	Simple_repeat	1	72	(0)	4057744
13	19.8	4.0	3.9	chr9	34652418	34652467	(103742250)	+	(TGCATG)n	Simple_repeat	1	52	(0)	4057745
264	21.1	0.0	1.9	chr9	35096008	35096060	(103298657)	+	MER5A	DNA/hAT-Charlie	78	129	(60)	4058345
1628	10.6	2.1	0.8	chr9	35657504	35657740	(102736977)	+	AluJb	SINE/Alu	1	240	(72)	4059251
4758	15.8	0.4	0.9	chr9	64016535	64017494	(74377223)	+	TAR1	Satellite/telo	1114	2068	(43)	4074954
6262	12.8	1.2	1.9	chr9	64478771	64479744	(73914973)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	4075366
12	14.1	3.0	2.9	chr9	65397801	65397833	(72996884)	+	A-rich	Low_complexity	1	34	(0)	4076205
2440	10.3	0.0	0.3	chr9	72378585	72378885	(66015832)	C	AluSc5	SINE/Alu	(9)	300	1	4086396
16	9.3	0.0	0.0	chr9	72379129	72379151	(66015566)	+	(T)n	Simple_repeat	1	23	(0)	4086397
314	20.8	0.0	0.0	chr9	87041779	87041850	(51352867)	+	L1MEc	LINE/L1	1472	1543	(4872)	4108844
26269	2.8	0.2	0.0	chr9	87041883	87047900	(51346817)	+	L1PA3	LINE/L1	127	6155	(0)	4108845
30	35.2	0.8	1.5	chr9	91682029	91682160	(46712557)	+	(TA)n	Simple_repeat	1	133	(0)	4115582
15	34.7	0.0	0.0	chr9	91682126	91682172	(46712545)	+	(TG)n	Simple_repeat	1	47	(0)	4115583
2548	5.3	0.3	0.0	chr9	92115681	92115979	(46278738)	C	AluSp	SINE/Alu	(13)	300	1	4116218
745	13.7	0.8	2.3	chr9	94165547	94165677	(44229040)	+	AluJb	SINE/Alu	176	304	(8)	4119124
244	21.3	1.3	0.5	chr9	94165714	94165828	(44228889)	C	MIR	SINE/MIR	(98)	170	57	4119125
351	19.8	5.6	3.8	chr9	94168268	94168372	(44226345)	+	Charlie9	DNA/hAT-Charlie	5	111	(2646)	4119127
16	0.0	0.0	0.0	chr9	96417977	96417996	(41976721)	+	(GGC)n	Simple_repeat	1	20	(0)	4122833
387	30.4	3.6	3.6	chr9	96575035	96575201	(41819516)	C	MLT1J1	LTR/ERVL-MaLR	(21)	423	257	4123103
250	28.6	4.9	4.9	chr9	96575312	96575392	(41819325)	+	LTR79	LTR/ERVL	424	504	(23)	4123104
2105	9.5	0.3	7.0	chr9	97960587	97960913	(40433804)	C	AluSz	SINE/Alu	(7)	305	1	4125486
39	2.7	0.0	0.0	chr9	97961214	97961251	(40433466)	+	(GT)n	Simple_repeat	1	38	(0)	4125487
427	22.2	15.6	1.2	chr9	97981689	97981852	(40412865)	+	MIRb	SINE/MIR	28	219	(43)	4125542
18	4.0	0.0	0.0	chr9	97981890	97981915	(40412802)	+	(TTTTG)n	Simple_repeat	1	26	(0)	4125543
225	33.9	5.8	9.6	chr9	98017160	98017430	(40377287)	C	L2b	LINE/L2	(16)	3359	3100	4125609
1524	5.5	3.5	3.0	chr9	105696301	105696500	(32698217)	C	AluSx1	SINE/Alu	(25)	287	87	4137935
420	18.3	3.8	7.3	chr9	105696503	105696570	(32698147)	+	Charlie1a	DNA/hAT-Charlie	1251	1316	(139)	4137936
1759	14.1	16.8	1.6	chr9	105696571	105696952	(32697765)	C	LTR47A	LTR/ERVL	(0)	452	1	4137937
200	28.1	13.6	0.0	chr9	109117946	109118034	(29276683)	+	MIRc	SINE/MIR	22	124	(144)	4143825
658	20.2	21.3	6.9	chr9	112311445	112311646	(26083071)	+	MER8	DNA/TcMar-Tigger	1	239	(0)	4149558
1428	17.6	1.7	7.7	chr9	112311668	112311980	(26082737)	+	AluJr	SINE/Alu	2	295	(17)	4149559
235	32.3	18.0	1.2	chr9	114588243	114588408	(23806309)	+	L2c	LINE/L2	2509	2708	(711)	4153994
194	33.3	2.8	1.4	chr9	116686928	116686997	(21707720)	C	MIR1_Amn	SINE/MIR	(80)	150	80	4157867
296	26.0	8.4	3.4	chr9	116687011	116687161	(21707556)	+	MIR3	SINE/MIR	23	175	(33)	4157868
206	25.1	0.0	0.0	chr9	120715023	120715079	(17679638)	C	MIR1_Amn	SINE/MIR	(90)	178	122	4165551
265	18.5	7.1	4.4	chr9	121202235	121202302	(17192415)	C	MIRb	SINE/MIR	(11)	257	188	4166478
381	23.2	1.2	0.0	chr9	121202366	121202465	(17192252)	C	MIRc	SINE/MIR	(87)	181	73	4166478
37	33.8	1.4	3.7	chr9	122093034	122093247	(16301470)	+	(CCG)n	Simple_repeat	1	217	(0)	4168287
2434	8.1	0.7	0.0	chr9	122828828	122829135	(15565582)	+	AluSx1	SINE/Alu	1	310	(2)	4169621
218	10.9	14.8	0.0	chr9	124772028	124772073	(13622644)	+	MIR3	SINE/MIR	104	157	(51)	4173184
200	30.9	4.7	1.2	chr9	127451080	127451161	(10943556)	C	MIR3	SINE/MIR	(43)	165	81	4178232
236	19.2	4.0	0.0	chr9	128160659	128160716	(10234001)	C	MIR1_Amn	SINE/MIR	(84)	184	121	4179865
538	2.7	0.0	19.8	chr9	128340076	128340166	(10054551)	C	tRNA-Arg-AGA	tRNA	(3)	73	1	4180290
294	18.9	18.9	0.0	chr9	128829296	128829385	(9565332)	+	L2a	LINE/L2	3312	3422	(4)	4181421
374	34.0	8.0	1.9	chr9	128886793	128887002	(9507715)	C	MIRc	SINE/MIR	(22)	246	23	4181572
2241	11.5	0.0	1.3	chr9	129035657	129035969	(9358748)	C	AluSx3	SINE/Alu	(2)	309	1	4181934
281	29.4	9.4	1.6	chr9	129035970	129036015	(9358702)	C	MIRc	SINE/MIR	(115)	153	103	4181933
191	38.0	6.6	2.8	chr9	129036086	129036261	(9358456)	C	L2c	LINE/L2	(58)	3329	3147	4181935
3940	16.5	4.4	0.1	chr9	129274217	129274907	(9119810)	+	L1MB3	LINE/L1	5462	6183	(0)	4182475
444	26.6	6.9	5.3	chr9	129393078	129393408	(9001309)	+	L2c	LINE/L2	2917	3269	(157)	4182723
386	34.2	3.4	3.9	chr9	129393402	129393620	(9001097)	+	MIRb	SINE/MIR	29	246	(16)	4182724
315	27.6	1.5	5.3	chr9	129481886	129482012	(8912705)	C	MIRb	SINE/MIR	(126)	142	13	4182933
15	19.1	0.0	2.6	chr9	129482062	129482099	(8912618)	+	GA-rich	Low_complexity	1	38	(0)	4182934
245	23.7	2.1	0.0	chr9	129488847	129488932	(8905785)	+	MIR3	SINE/MIR	53	147	(121)	4182953
255	22.9	1.6	1.6	chr9	129488970	129489031	(8905686)	C	MIR3	SINE/MIR	(66)	142	81	4182954
1322	22.3	11.6	5.4	chr9	129562962	129563227	(8831490)	+	LTR48B	LTR/ERV1	93	398	(246)	4183133
2410	9.2	0.7	0.0	chr9	129563228	129563531	(8831186)	C	AluSc8	SINE/Alu	(5)	306	1	4183134
323	31.7	8.8	2.0	chr9	129626577	129626724	(8767993)	+	MIRb	SINE/MIR	102	260	(8)	4183281
1811	14.8	1.8	1.4	chr9	129737339	129737622	(8657095)	C	AluJb	SINE/Alu	(12)	300	16	4183516
310	31.4	6.3	0.8	chr9	129737623	129737683	(8657034)	+	MIRb	SINE/MIR	188	250	(18)	4183515
1111	18.7	1.1	0.0	chr9	129789741	129789922	(8604795)	+	FAM	SINE/Alu	1	184	(1)	4183649
1976	13.2	0.7	0.3	chr9	129790074	129790362	(8604355)	C	AluJb	SINE/Alu	(20)	292	3	4183650
499	34.2	1.1	2.1	chr9	129863365	129863555	(8531162)	C	MIRb	SINE/MIR	(19)	249	61	4183807
2532	5.9	0.3	0.0	chr9	130712063	130712365	(7682352)	C	AluSp	SINE/Alu	(9)	304	1	4185637
771	25.0	6.5	3.8	chr9	132505569	132505850	(5888867)	+	MER102b	DNA/hAT-Charlie	44	341	(0)	4189038
14	19.1	3.9	3.7	chr9	132978389	132978440	(5416277)	+	(TTTAATAA)n	Simple_repeat	1	54	(0)	4189845
1576	6.9	0.0	5.1	chr9	133335690	133335905	(5058812)	+	AluY	SINE/Alu	107	311	(0)	4190430
2447	5.8	0.7	0.0	chr9	133347238	133347531	(5047186)	+	AluSx1	SINE/Alu	3	298	(14)	4190449
17	3.6	0.0	8.8	chr9	134325463	134325496	(4069221)	+	(CGG)n	Simple_repeat	1	34	(0)	4191899
43615	7.8	0.6	0.9	chr9	135440177	135444140	(2950577)	C	HERVE-int	LTR/ERV1	(3837)	3976	1	4193232
2129	13.6	0.7	0.3	chr9	135918300	135918608	(2476109)	+	AluJb	SINE/Alu	2	311	(1)	4193788
5232	21.1	7.9	0.4	chr9	135918609	135919468	(2475249)	+	L1MB3	LINE/L1	5200	6138	(45)	4193783
693	22.3	8.7	0.0	chr9	136128849	136129059	(2265658)	+	L1MB3	LINE/L1	5953	6183	(0)	4194063
11	17.1	2.9	2.8	chr9	136363573	136363607	(2031110)	+	(GCCCCA)n	Simple_repeat	1	36	(0)	4194302
13	12.1	3.6	0.0	chr9	136687065	136687092	(1707625)	+	G-rich	Low_complexity	1	29	(0)	4194649
1114	6.1	0.0	0.0	chr9	136809495	136809625	(1585092)	+	AluSx3	SINE/Alu	1	131	(180)	4194832
233	26.6	12.2	2.1	chr9	136991413	136991508	(1403209)	+	L2b	LINE/L2	3242	3348	(27)	4195077
2096	7.9	7.3	0.7	chr9	136991578	136991857	(1402860)	C	AluSx	SINE/Alu	(12)	300	1	4195088
1685	14.1	4.6	1.4	chr9	137224158	137224433	(1170284)	+	AluJb	SINE/Alu	3	287	(25)	4195364
2415	7.7	0.0	0.3	chr9	137224436	137224734	(1169983)	+	AluSx1	SINE/Alu	1	298	(14)	4195365
208	24.5	12.5	0.0	chr9	137617782	137617830	(776887)	+	MamRTE1	LINE/RTE-BovB	2466	2521	(1291)	4195880
1304	11.9	0.0	6.6	chr9	137676143	137676368	(718349)	C	AluSc8	SINE/Alu	(100)	211	1	4196013
1258	15.3	0.0	0.0	chr9	137676373	137676568	(718149)	C	AluSx	SINE/Alu	(19)	293	98	4196014
1890	16.9	1.9	7.6	chr9	137676569	137677043	(717674)	+	MER61C	LTR/ERV1	14	498	(117)	4196015
2141	10.2	3.7	0.0	chrX	281764	282047	(155758848)	C	AluSx	SINE/Alu	(17)	295	1	4358323
1853	16.3	2.6	0.3	chrX	426249	426548	(155614347)	C	AluJo	SINE/Alu	(5)	307	1	4358581
1904	16.0	13.6	2.7	chrX	2609730	2610141	(153430754)	C	MER4C	LTR/ERV1	(1)	464	1	4363230
4133	5.9	2.3	0.7	chrX	2890508	2891056	(153149839)	C	LTR6B	LTR/ERV1	(0)	558	1	4363774
4259	10.9	0.5	0.9	chrX	2891057	2891645	(153149250)	C	MER41B	LTR/ERV1	(43)	591	1	4363773
576	25.0	5.6	0.6	chrX	14029401	14029569	(142011326)	C	MER5B	DNA/hAT-Charlie	(0)	178	1	4382165
15	3.9	7.1	3.3	chrX	48469691	48469718	(107571177)	+	(AG)n	Simple_repeat	1	30	(0)	4436138
15	12.8	2.8	2.7	chrX	49878936	49878971	(106161924)	+	GA-rich	Low_complexity	1	37	(0)	4438514
1204	33.1	13.1	2.1	chrX	53269302	53270293	(102770602)	+	L2a	LINE/L2	1533	2649	(770)	4443366
216	38.9	0.0	2.4	chrX	64206326	64206491	(91834404)	C	MIR3	SINE/MIR	(32)	176	15	4451083
25550	13.6	3.5	2.1	chrX	80424042	80425746	(75615149)	C	LTR25-int	LTR/ERV1	(11)	7177	5456	4471821
14	20.2	0.0	0.0	chrX	118644577	118644610	(37396285)	+	(CACATA)n	Simple_repeat	1	34	(0)	4519628
353	35.2	7.6	5.1	chrX	118644727	118645058	(37395837)	C	L2	LINE/L2	(467)	2952	2612	4519629
6767	7.7	4.2	3.9	chrX	129872871	129873062	(26167833)	+	MER41-int	LTR/ERV1	4943	5146	(800)	4535471
2461	7.0	0.0	0.7	chrX	129873063	129873360	(26167535)	+	AluSc8	SINE/Alu	1	296	(15)	4535472
17	3.9	3.7	0.0	chrX	135520841	135520867	(20520028)	+	(GTCCC)n	Simple_repeat	1	28	(0)	4544492
280	17.0	0.0	0.0	chrX	136744841	136744887	(19296008)	C	MIR	SINE/MIR	(1)	261	215	4546508
220	26.2	12.2	0.0	chrX	136744977	136745041	(19295854)	C	MIRc	SINE/MIR	(156)	112	34	4546509
37	2.6	0.0	0.0	chrX	147911523	147911561	(8129334)	+	(ACCAA)n	Simple_repeat	1	39	(0)	4562593
18200	12.8	4.4	3.2	chrX	154813046	154816311	(1224584)	C	MER4-int	LTR/ERV1	(0)	6598	3291	4572467