17	12.8	2.9	0.0	chr1	1000024	1000057	(247956365)	+	G-rich	Low_complexity	1	35	(0)	1254
12	27.7	0.0	2.2	chr1	1000791	1000835	(247955587)	+	(GGCCG)n	Simple_repeat	1	45	(0)	1256
13	15.9	2.7	2.6	chr1	1033359	1033395	(247923027)	+	(GCACAC)n	Simple_repeat	1	38	(0)	1304
104	20.7	5.1	3.2	chr1	1033499	1033852	(247922570)	+	(CCAGCC)n	Simple_repeat	1	372	(0)	1305
205	38.1	8.9	2.3	chr1	1231418	1231594	(247724828)	C	MIRb	SINE/MIR	(2)	260	71	1497
17	13.0	2.9	0.0	chr1	1273795	1273828	(247682594)	+	(CCG)n	Simple_repeat	1	35	(0)	1543
12	31.5	0.0	0.0	chr1	1349764	1349810	(247606612)	+	G-rich	Low_complexity	1	47	(0)	1607
16	24.5	1.6	3.2	chr1	1375060	1375120	(247581302)	+	(GCCCGGC)n	Simple_repeat	1	62	(0)	1639
15	19.8	7.5	2.8	chr1	1407559	1407625	(247548797)	+	G-rich	Low_complexity	1	72	(0)	1698
17	23.1	1.3	7.7	chr1	1574632	1574708	(247381714)	+	(GGC)n	Simple_repeat	1	78	(0)	1975
1482	18.1	5.7	2.4	chr1	1779693	1779794	(247176628)	C	AluJb	SINE/Alu	(195)	117	1	2332
17	19.2	3.9	3.8	chr1	1890885	1890935	(247065487)	+	(CG)n	Simple_repeat	1	53	(0)	2568
23	25.6	3.5	1.1	chr1	1890946	1891030	(247065392)	+	(CGCTCC)n	Simple_repeat	1	88	(0)	2569
23	14.7	1.4	7.1	chr1	1891109	1891186	(247065236)	+	(CACGCG)n	Simple_repeat	1	73	(0)	2570
13	21.0	3.2	6.2	chr1	2195398	2195459	(246760963)	+	(CTGGCCC)n	Simple_repeat	1	64	(0)	2984
20	24.7	0.0	1.7	chr1	3652504	3652562	(245303860)	+	(GCCC)n	Simple_repeat	1	59	(0)	4185
408	23.2	11.2	0.0	chr1	3676864	3677014	(245279408)	C	MER20	DNA/hAT-Charlie	(48)	171	2	4227
13	19.2	8.3	0.0	chr1	6235667	6235714	(242720708)	+	(CGGC)n	Simple_repeat	1	52	(0)	7885
11	21.3	4.4	2.1	chr1	6784676	6784720	(242171702)	+	(GCCGGC)n	Simple_repeat	1	47	(0)	8925
3057	16.6	1.7	1.4	chr1	7994064	7994286	(240962136)	C	L1MB3	LINE/L1	(354)	5829	5607	10720
770	8.0	5.0	0.0	chr1	7994287	7994399	(240962023)	C	L1MB3	LINE/L1	(741)	5439	5321	10720
376	14.3	3.1	0.0	chr1	7994413	7994475	(240961947)	C	U6	snRNA	(42)	65	1	10722
2171	11.6	0.0	0.7	chr1	7994521	7994812	(240961610)	C	AluSz	SINE/Alu	(11)	301	12	10723
12	31.0	0.0	1.9	chr1	8818008	8818060	(240138362)	+	(CCGCCCC)n	Simple_repeat	1	53	(0)	12309
13	18.2	2.6	2.5	chr1	9539663	9539701	(239416721)	+	(CGGCGA)n	Simple_repeat	1	40	(0)	13848
395	23.1	5.3	0.0	chr1	9629569	9629676	(239326746)	+	MIRb	SINE/MIR	87	200	(68)	14021
185	17.5	2.4	0.0	chr1	10430229	10430268	(238526154)	C	L2a	LINE/L2	(38)	3388	3348	15779
1346	16.2	1.9	4.1	chr1	11908526	11908796	(237047626)	+	MER1B	DNA/hAT-Charlie	75	339	(0)	18707
768	7.9	0.0	5.0	chr1	11909807	11909926	(237046496)	C	U5	snRNA	(1)	115	2	18711
2246	12.0	0.3	0.0	chr1	12044455	12044753	(236911669)	+	AluSz	SINE/Alu	1	300	(12)	19030
238	28.6	11.8	5.0	chr1	12052267	12052550	(236903872)	+	L2b	LINE/L2	2919	3211	(176)	19049
196	26.2	2.4	8.1	chr1	12068336	12068422	(236888000)	C	MIR3	SINE/MIR	(62)	146	65	19080
16	13.2	3.0	0.0	chr1	12068662	12068694	(236887728)	+	(CATG)n	Simple_repeat	1	34	(0)	19081
405	23.8	3.7	1.3	chr1	12078656	12078772	(236877650)	+	MIR	SINE/MIR	25	145	(63)	19107
551	19.7	19.0	0.0	chr1	12078863	12078994	(236877428)	C	MER5A1	DNA/hAT-Charlie	(0)	166	4	19108
15	29.2	0.0	3.4	chr1	15617497	15617555	(233338867)	+	G-rich	Low_complexity	1	59	(0)	25685
16	10.4	3.2	0.0	chr1	15617534	15617564	(233338858)	+	(GAGC)n	Simple_repeat	1	32	(0)	25686
21	13.9	0.0	2.3	chr1	15617628	15617670	(233338752)	+	G-rich	Low_complexity	1	43	(0)	25687
517	29.7	12.7	0.0	chr1	16012712	16012896	(232943526)	+	MIRb	SINE/MIR	57	268	(0)	26520
15	9.9	0.0	7.9	chr1	17011760	17011797	(231944625)	+	(CCGGCC)n	Simple_repeat	1	38	(0)	28481
511	32.1	8.0	0.0	chr1	17239261	17239456	(231716966)	+	MIRb	SINE/MIR	48	260	(8)	28982
1862	18.1	1.3	0.3	chr1	17536198	17536495	(231419927)	+	AluJb	SINE/Alu	1	301	(11)	29667
3435	14.3	5.3	0.2	chr1	19459676	19460264	(229496158)	+	Tigger7	DNA/TcMar-Tigger	9	629	(1862)	33666
4569	10.0	0.8	1.7	chr1	19508778	19509281	(229447141)	C	MER41B	LTR/ERV1	(126)	508	1	33785
15	18.2	0.0	4.9	chr1	19882621	19882661	(229073761)	+	(GCG)n	Simple_repeat	1	41	(0)	34717
44	2.3	0.0	0.0	chr1	21176568	21176611	(227779811)	+	(CGC)n	Simple_repeat	1	44	(0)	37302
245	28.7	12.8	3.4	chr1	21177346	21177493	(227778929)	C	MIRb	SINE/MIR	(45)	223	60	37303
3255	15.4	3.0	4.9	chr1	21791392	21791926	(227164496)	C	MER41B	LTR/ERV1	(37)	597	73	38679
2017	9.4	0.0	0.4	chr1	21791927	21792182	(227164240)	+	AluY	SINE/Alu	1	255	(56)	38680
13	27.9	2.1	0.0	chr1	21937482	21937529	(227018893)	+	(GGCCCGC)n	Simple_repeat	1	49	(0)	38998
18	19.4	0.0	6.7	chr1	21937554	21937613	(227018809)	+	G-rich	Low_complexity	1	60	(0)	38999
259	27.9	1.7	2.7	chr1	22025238	22025366	(226931056)	C	MIRb	SINE/MIR	(28)	180	60	39248
13	9.3	0.0	0.0	chr1	23554620	23554642	(225401780)	+	(GAAG)n	Simple_repeat	1	23	(0)	42729
16	7.1	3.1	3.0	chr1	23554882	23554913	(225401509)	+	(GAGCCA)n	Simple_repeat	1	33	(0)	42730
27	0.0	0.0	3.3	chr1	23619563	23619592	(225336830)	+	(CCG)n	Simple_repeat	1	30	(0)	42898
18	17.5	6.7	1.6	chr1	23619639	23619705	(225336717)	+	(GGCGTG)n	Simple_repeat	1	70	(0)	42899
15	21.2	0.0	0.0	chr1	23619705	23619742	(225336680)	+	(CCCCTCC)n	Simple_repeat	1	38	(0)	42900
1333	28.9	11.6	11.6	chr1	25032386	25033152	(223923270)	C	Tigger13a	DNA/TcMar-Tigger	(1)	770	4	46235
394	27.4	0.0	0.0	chr1	25429884	25429978	(223526444)	+	MIRb	SINE/MIR	159	253	(15)	47146
19	25.2	2.7	2.6	chr1	25429997	25430070	(223526352)	+	(CCGGC)n	Simple_repeat	1	76	(0)	47147
15	17.5	0.0	0.0	chr1	25543664	25543695	(223412727)	+	(GGC)n	Simple_repeat	1	32	(0)	47358
15	18.2	0.0	2.6	chr1	25543805	25543843	(223412579)	+	(GCCGG)n	Simple_repeat	1	39	(0)	47359
14	18.9	4.8	0.0	chr1	25859472	25859513	(223096909)	+	(CCGGCC)n	Simple_repeat	1	44	(0)	47960
12	27.7	3.1	3.0	chr1	25859514	25859535	(223096887)	+	(CCGCC)n	Simple_repeat	1	66	(0)	47961
18	22.2	2.1	0.0	chr1	26472643	26472689	(222483733)	+	(GCC)n	Simple_repeat	1	48	(0)	49429
12	23.1	2.0	4.0	chr1	26542450	26542455	(222413967)	+	(TGTG)n	Simple_repeat	1	14	(36)	49627
12	10.1	9.4	0.0	chr1	26542456	26542487	(222413935)	+	(TGTGCA)n	Simple_repeat	1	35	(0)	49628
12	23.1	2.0	4.0	chr1	26542488	26542498	(222413924)	+	(TGTG)n	Simple_repeat	15	50	(0)	49627
24	18.7	5.3	2.5	chr1	26826609	26826684	(222129738)	+	(GGC)n	Simple_repeat	1	80	(0)	50248
13	14.4	3.0	2.9	chr1	26826706	26826738	(222129684)	+	(CGC)n	Simple_repeat	1	34	(0)	50249
15	27.5	6.7	0.0	chr1	27155046	27155120	(221801302)	+	(GCTCCA)n	Simple_repeat	1	80	(0)	51051
209	29.7	7.5	5.1	chr1	27449196	27449312	(221507110)	+	L2c	LINE/L2	3255	3374	(13)	51743
665	23.9	3.0	0.6	chr1	27609682	27609841	(221346581)	+	MIRb	SINE/MIR	51	214	(54)	52115
255	16.4	3.2	1.6	chr1	27609885	27609946	(221346476)	+	MamRep605	LTR?	56	118	(731)	52116
598	25.2	8.6	0.6	chr1	28172430	28172589	(220783833)	+	MIRb	SINE/MIR	28	201	(67)	53439
199	12.5	0.0	0.0	chr1	28172622	28172653	(220783769)	+	L2b	LINE/L2	3344	3375	(0)	53440
449	33.0	6.6	4.9	chr1	28172722	28172944	(220783478)	+	MIRc	SINE/MIR	15	241	(27)	53441
1987	14.7	8.6	4.8	chr1	28199256	28199655	(220756767)	+	MSTA	LTR/ERVL-MaLR	1	417	(11)	53523
1314	14.9	12.9	0.0	chr1	28510357	28510605	(220445817)	+	AluSc	SINE/Alu	2	287	(22)	54383
12	20.7	5.1	0.0	chr1	28553062	28553100	(220403322)	+	(GCCCC)n	Simple_repeat	1	41	(0)	54505
24	19.4	2.6	3.9	chr1	28592397	28592472	(220363950)	+	G-rich	Low_complexity	1	78	(0)	54617
384	29.4	2.7	2.7	chr1	28648880	28649025	(220307397)	+	AluJr4	SINE/Alu	11	156	(156)	54782
19	20.8	0.0	6.3	chr1	29181798	29181860	(219774562)	+	(GGC)n	Simple_repeat	1	63	(0)	56088
182	30.6	0.0	0.0	chr1	30756942	30756990	(218199432)	C	MIR3	SINE/MIR	(104)	104	56	58993
2423	9.3	0.0	0.0	chr1	31162519	31162820	(217793602)	+	AluSq	SINE/Alu	3	304	(9)	59999
303	20.6	0.0	2.7	chr1	31163064	31163080	(217793342)	+	MIR	SINE/MIR	72	88	(174)	60000
55	0.0	0.0	0.0	chr1	31163090	31163136	(217793286)	+	(TG)n	Simple_repeat	1	47	(0)	60001
222	31.4	6.7	0.0	chr1	31423473	31423542	(217532880)	+	MIRb	SINE/MIR	47	121	(147)	60658
13	20.9	4.3	2.1	chr1	31938121	31938144	(217018278)	+	(CGGCG)n	Simple_repeat	1	46	(0)	61650
16	0.0	0.0	0.0	chr1	31938145	31938164	(217018258)	+	(CGG)n	Simple_repeat	1	20	(0)	61651
35	29.8	3.9	3.8	chr1	31938185	31938388	(217018034)	+	(GCC)n	Simple_repeat	1	212	(0)	61652
15	14.7	0.0	0.0	chr1	31938446	31938475	(217017947)	+	(GCTG)n	Simple_repeat	1	30	(0)	61653
183	24.7	8.0	1.2	chr1	33127828	33127909	(215828513)	C	MIRb	SINE/MIR	(24)	244	157	64501
27	13.6	0.0	0.0	chr1	33256904	33256945	(215699477)	+	(GT)n	Simple_repeat	1	42	(0)	64796
455	31.3	11.3	2.8	chr1	33260184	33260645	(215695777)	+	L2a	LINE/L2	2825	3321	(105)	64803
16	29.2	2.7	5.3	chr1	33349580	33349689	(215606733)	+	(CCCGG)n	Simple_repeat	1	113	(0)	64945
196	29.3	0.0	0.0	chr1	34360839	34360896	(214595526)	C	MIRb	SINE/MIR	(46)	222	165	66677
30	0.0	0.0	0.0	chr1	35507417	35507444	(213448978)	+	(AAAACA)n	Simple_repeat	1	28	(0)	68892
12	11.8	2.3	8.9	chr1	37808027	37808070	(211148352)	+	G-rich	Low_complexity	1	45	(0)	73488
11	14.2	10.3	0.0	chr1	38991486	38991524	(209964898)	+	G-rich	Low_complexity	1	43	(0)	75807
1350	26.2	14.2	1.4	chr1	39539361	39539926	(209416496)	+	MER20B	DNA/hAT-Charlie	5	654	(129)	76887
17	27.4	1.3	4.0	chr1	39576661	39576736	(209379686)	+	(TTTTTC)n	Simple_repeat	1	74	(0)	76951
12	17.6	5.0	2.4	chr1	39576756	39576795	(209379627)	+	(GCG)n	Simple_repeat	1	42	(0)	76952
15	17.0	9.8	1.5	chr1	39576889	39576949	(209379473)	+	(CGGCG)n	Simple_repeat	1	67	(0)	76953
2592	1.1	0.0	0.0	chr1	39606452	39606730	(209349692)	+	AluYa5	SINE/Alu	21	299	(12)	77040
690	19.9	3.4	7.4	chr1	39977186	39977340	(208979082)	C	MER3	DNA/hAT-Charlie	(54)	155	1	77827
197	40.0	2.9	1.0	chr1	39977467	39977567	(208978855)	+	L2b	LINE/L2	3102	3204	(183)	77829
16	9.4	10.6	1.9	chr1	40374626	40374672	(208581750)	+	GA-rich	Low_complexity	1	52	(0)	78697
275	27.0	10.7	1.0	chr1	41658292	41658392	(207298030)	+	MIRc	SINE/MIR	3	114	(154)	81175
182	26.2	5.6	5.6	chr1	41658384	41658472	(207297950)	C	L2a	LINE/L2	(8)	3418	3330	81176
211	25.0	4.0	0.0	chr1	41658468	41658515	(207297907)	+	MIRc	SINE/MIR	101	150	(118)	81175
443	29.7	11.9	3.7	chr1	42923231	42923608	(206032814)	C	L2	LINE/L2	(337)	3082	2670	83366
22	22.8	3.8	2.4	chr1	43707610	43707689	(205248733)	+	(CGCCTC)n	Simple_repeat	1	83	(0)	84746
13	20.9	0.0	0.0	chr1	43707750	43707782	(205248640)	+	(CCGCC)n	Simple_repeat	1	33	(0)	84747
15	25.3	2.6	5.1	chr1	43707772	43707848	(205248574)	+	G-rich	Low_complexity	1	79	(0)	84748
346	22.0	14.8	4.5	chr1	44213112	44213244	(204743178)	C	MIRb	SINE/MIR	(34)	234	86	85684
15	21.2	0.0	2.5	chr1	44355120	44355159	(204601263)	+	(GGC)n	Simple_repeat	1	40	(0)	85869
540	20.4	0.0	0.0	chr1	44721624	44721711	(204234711)	+	AluJb	SINE/Alu	178	265	(47)	86565
685	12.5	0.0	1.8	chr1	44721786	44721899	(204234523)	C	U5	snRNA	(1)	115	4	86566
24	15.2	0.0	3.6	chr1	44775763	44775817	(204180605)	+	G-rich	Low_complexity	1	55	(0)	86689
757	24.1	2.4	0.6	chr1	44819664	44819825	(204136597)	C	AluSx	SINE/Alu	(35)	277	113	86771
588	11.6	2.1	0.0	chr1	44819903	44819997	(204136425)	C	U5	snRNA	(19)	97	1	86772
181	29.8	15.4	0.0	chr1	45011805	45011908	(203944514)	+	L2b	LINE/L2	3220	3342	(33)	87196
204	17.4	2.1	8.0	chr1	45543837	45543886	(203412536)	+	L2c	LINE/L2	3380	3426	(0)	88241
220	17.4	4.2	0.0	chr1	45687561	45687606	(203268816)	C	MIR3	SINE/MIR	(80)	128	81	88537
13	13.1	0.0	0.0	chr1	46668325	46668349	(202288073)	+	(CCT)n	Simple_repeat	1	25	(0)	90458
23	13.7	2.7	7.8	chr1	51519364	51519438	(197436984)	+	(CCCG)n	Simple_repeat	1	77	(0)	98834
244	31.8	7.0	0.9	chr1	51519558	51519665	(197436757)	+	MIRb	SINE/MIR	88	202	(66)	98835
12	23.2	0.0	4.5	chr1	51878751	51878794	(197077628)	+	(CCCTCCG)n	Simple_repeat	1	44	(0)	99630
13	22.5	2.0	3.9	chr1	52602415	52602464	(196353958)	+	(GGCTGC)n	Simple_repeat	1	51	(0)	101225
272	29.2	1.4	0.0	chr1	52703541	52703612	(196252810)	C	MIR3	SINE/MIR	(68)	140	68	101511
32	0.0	0.0	0.0	chr1	52726473	52726502	(196229920)	+	(GGCTGC)n	Simple_repeat	1	30	(0)	101582
13	16.5	0.0	5.3	chr1	55215174	55215211	(193741211)	+	(CGCGC)n	Simple_repeat	1	38	(0)	106639
13	20.1	0.0	2.8	chr1	55215315	55215350	(193741072)	+	(GGCGC)n	Simple_repeat	1	36	(0)	106640
17	8.1	0.0	0.0	chr1	55215359	55215384	(193741038)	+	(CCT)n	Simple_repeat	1	26	(0)	106641
19	25.6	2.9	5.7	chr1	58782585	58782687	(190173735)	+	(GCTGCC)n	Simple_repeat	1	106	(0)	113505
28	20.4	2.4	3.5	chr1	62688241	62688324	(186268098)	+	(GGC)n	Simple_repeat	1	86	(0)	120631
367	37.9	7.3	0.1	chr1	66397269	66397516	(182558906)	C	L2a	LINE/L2	(300)	3126	2856	127162
15	25.9	1.4	5.6	chr1	67053630	67053700	(181902722)	+	(GCCC)n	Simple_repeat	1	72	(0)	128151
27	21.7	1.5	0.0	chr1	67053742	67053806	(181902616)	+	(GCC)n	Simple_repeat	1	66	(0)	128152
673	29.1	3.2	0.0	chr1	67818733	67818942	(181137480)	C	MIR	SINE/MIR	(10)	252	36	129633
241	28.1	18.8	5.8	chr1	67818999	67819360	(181137062)	C	L2c	LINE/L2	(578)	2841	2422	129626
16	24.3	3.3	1.6	chr1	67833273	67833332	(181123090)	+	(CGCCG)n	Simple_repeat	1	62	(0)	129657
11	13.4	5.7	2.7	chr1	67833344	67833378	(181123044)	+	(CCGCCG)n	Simple_repeat	1	37	(0)	129658
19	6.8	3.2	0.0	chr1	67833416	67833446	(181122976)	+	(CCT)n	Simple_repeat	1	32	(0)	129659
261	29.1	11.9	7.2	chr1	70504430	70504581	(178451841)	C	MIRb	SINE/MIR	(67)	201	42	133545
44	2.4	0.0	0.0	chr1	76936954	76936995	(172019427)	+	(GT)n	Simple_repeat	1	42	(0)	142144
283	25.0	2.3	1.2	chr1	76947987	76948071	(172008351)	C	MLT1I	LTR/ERVL-MaLR	(6)	405	320	142157
244	34.1	3.6	2.9	chr1	76948132	76948270	(172008152)	C	MLT1I	LTR/ERVL-MaLR	(239)	209	70	142157
24	10.8	0.0	0.0	chr1	81801412	81801451	(167154971)	+	(TCTC)n	Simple_repeat	1	40	(0)	149030
333	36.0	10.7	0.5	chr1	81895031	81895231	(167061191)	+	LFSINE_Vert	SINE/tRNA	5	228	(231)	149126
15	11.0	7.3	2.3	chr1	84690710	84690750	(164265672)	+	(CTGCGG)n	Simple_repeat	1	44	(0)	152920
12	22.7	5.7	1.8	chr1	84690818	84690870	(164265552)	+	G-rich	Low_complexity	1	56	(0)	152921
20	7.7	15.3	2.4	chr1	87328746	87328817	(161627605)	+	(GAGC)n	Simple_repeat	1	83	(0)	156907
14	18.6	2.7	0.0	chr1	93681782	93681818	(155274604)	+	(GCTCCG)n	Simple_repeat	1	38	(0)	166666
488	5.5	0.0	14.1	chr1	93847573	93847657	(155108765)	+	tRNA-Arg-AGA	tRNA	1	73	(3)	166925
31	22.1	2.0	4.8	chr1	95234014	95234115	(153722307)	+	(GCCCC)n	Simple_repeat	1	104	(0)	169060
3273	17.3	5.0	1.0	chr1	106995827	106996324	(141960098)	+	MER73	LTR/ERVL	120	643	(1)	184790
8036	19.2	5.6	2.8	chr1	106996325	106996411	(141960011)	+	L1MC3	LINE/L1	8112	8186	(17)	184780
23	13.0	0.0	0.0	chr1	107451090	107451124	(141505298)	+	(T)n	Simple_repeat	1	35	(0)	185458
34	5.2	0.0	0.0	chr1	108560105	108560144	(140396278)	+	(GGC)n	Simple_repeat	1	40	(0)	186918
3072	1.3	0.0	0.0	chr1	108660643	108660952	(140295470)	+	AluYa5	SINE/Alu	1	310	(1)	187088
15	20.3	4.4	0.0	chr1	108661127	108661171	(140295251)	+	(CCGCGC)n	Simple_repeat	1	47	(0)	187089
2601	6.5	0.3	0.0	chr1	109154000	109154308	(139802114)	+	AluSp	SINE/Alu	1	310	(3)	188123
375	25.9	3.5	8.9	chr1	109154355	109154477	(139801945)	C	MIR3	SINE/MIR	(5)	203	88	188124
12	15.3	5.3	2.5	chr1	111204368	111204405	(137752017)	+	(CCCGCT)n	Simple_repeat	1	40	(0)	191233
15	5.6	0.0	0.0	chr1	111593006	111593024	(137363398)	+	(AG)n	Simple_repeat	1	19	(0)	191763
14	14.6	0.0	3.1	chr1	112509388	112509419	(136447003)	+	(CTG)n	Simple_repeat	1	32	(0)	193235
1788	14.2	7.1	0.3	chr1	113793678	113793966	(135162456)	C	AluSx1	SINE/Alu	(2)	310	1	195528
562	35.4	11.4	5.1	chr1	113793967	113794882	(135161540)	+	L2c	LINE/L2	2403	3382	(5)	195527
460	25.5	10.2	0.0	chr1	116561242	116561425	(132394997)	+	L1MC5a	LINE/L1	2339	2543	(234)	199904
188	35.8	2.4	2.4	chr1	116770517	116770599	(132185823)	+	L2c	LINE/L2	3122	3204	(183)	200239
914	28.5	5.3	8.5	chr1	116770645	116770997	(132185425)	C	L2b	LINE/L2	(1)	3374	3034	200240
510	25.1	10.1	4.3	chr1	117654879	117655065	(131301357)	C	MIRb	SINE/MIR	(66)	202	4	201619
619	4.0	0.0	0.0	chr1	120844262	120844335	(128112087)	C	tRNA-Asn-AAC	tRNA	(3)	74	1	206153
1273	6.1	0.0	1.8	chr1	120850818	120850985	(128105437)	C	U1	snRNA	(0)	165	1	206170
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
1305	7.9	0.0	0.6	chr1	145281116	145281281	(103675141)	+	U1	snRNA	1	165	(0)	210764
1502	1.2	0.0	0.0	chr1	145465617	145465780	(103490642)	C	U1	snRNA	(1)	164	1	210998
13	16.9	0.0	0.0	chr1	145823942	145823968	(103132454)	+	(GCC)n	Simple_repeat	1	27	(0)	211601
271	30.2	13.5	3.3	chr1	145845057	145845268	(103111154)	C	L2c	LINE/L2	(619)	2800	2564	211639
1344	19.3	5.5	1.4	chr1	146035370	146035649	(102920773)	C	AluJb	SINE/Alu	(14)	298	7	211987
634	0.0	0.0	0.0	chr1	146035692	146035763	(102920659)	+	tRNA-Glu-GAG_	tRNA	1	72	(3)	211988
666	0.0	0.0	0.0	chr1	146037061	146037132	(102919290)	+	tRNA-Gly-GGA	tRNA	1	72	(3)	211991
637	2.8	0.0	0.0	chr1	146038044	146038115	(102918307)	+	tRNA-His-CAY_	tRNA	1	72	(3)	211993
674	0.0	0.0	0.0	chr1	146039401	146039474	(102916948)	+	tRNA-Lys-AAG	tRNA	1	74	(2)	211996
220	22.9	3.7	11.0	chr1	146051838	146051955	(102904467)	C	AluSg4	SINE/Alu	(190)	120	12	212031
1276	9.2	0.0	0.0	chr1	146052081	146052244	(102904178)	C	U1	snRNA	(1)	164	1	212032
1597	0.0	0.0	0.0	chr1	146376807	146376970	(102579452)	+	U1	snRNA	1	164	(1)	212533
14	0.0	0.0	0.0	chr1	147172643	147172660	(101783762)	+	(GCC)n	Simple_repeat	1	18	(0)	213747
402	28.8	1.4	1.1	chr1	147495241	147495370	(101461052)	C	MIRc	SINE/MIR	(51)	157	28	214166
1272	7.9	0.0	0.6	chr1	148522601	148522766	(100433656)	+	U1	snRNA	1	165	(0)	215838
674	0.0	0.0	0.0	chr1	148529257	148529331	(100427091)	+	tRNA-Asn-AAC	tRNA	1	75	(2)	215855
1017	20.6	0.0	0.0	chr1	149636766	149636930	(99319492)	+	U1	snRNA	1	165	(0)	217501
191	38.1	3.1	0.0	chr1	149997850	149997975	(98958447)	+	MIRc	SINE/MIR	3	132	(136)	218120
36	17.6	0.0	2.8	chr1	150236005	150236075	(98720347)	+	(CA)n	Simple_repeat	1	71	(0)	218582
11	19.4	5.3	7.6	chr1	150974454	150974528	(97981894)	+	(CGCCTCC)n	Simple_repeat	1	79	(0)	220231
17	25.7	0.0	0.0	chr1	151282307	151282352	(97674070)	+	(GCG)n	Simple_repeat	1	46	(0)	220903
20	25.3	4.3	0.0	chr1	151612252	151612321	(97344101)	+	(CGG)n	Simple_repeat	1	73	(0)	221596
668	1.4	0.0	0.0	chr1	153671250	153671323	(95285099)	+	tRNA-Met-i	tRNA	1	74	(1)	224506
21	25.1	1.6	0.0	chr1	153946317	153946377	(95010045)	+	(GGCG)n	Simple_repeat	1	62	(0)	225116
12	17.9	5.0	2.4	chr1	153946514	153946553	(95009869)	+	(CGCTG)n	Simple_repeat	1	42	(0)	225117
12	16.5	0.0	0.0	chr1	154221333	154221378	(94735044)	+	(GAGC)n	Simple_repeat	1	46	(0)	225712
17	23.2	0.0	2.1	chr1	155017543	155017589	(93938833)	+	(GCC)n	Simple_repeat	1	47	(0)	227202
59	9.6	1.1	0.0	chr1	155244786	155244875	(93711547)	+	(GAGA)n	Simple_repeat	1	91	(0)	227608
364	27.6	7.5	4.8	chr1	159077080	159077518	(89878904)	C	MER41E	LTR/ERV1	(0)	572	177	233860
1492	15.4	9.7	0.4	chr1	160431776	160432055	(88524367)	+	L1MC1	LINE/L1	6021	6329	(4)	235739
1545	12.4	2.1	3.3	chr1	160432056	160432296	(88524126)	+	AluSz	SINE/Alu	62	299	(13)	235740
714	28.9	2.8	0.9	chr1	160627075	160627287	(88329135)	+	MIRb	SINE/MIR	38	254	(14)	236028
1095	20.6	0.4	0.0	chr1	160643631	160643858	(88312564)	C	L1MA4	LINE/L1	(11)	6289	6061	236059
318	17.4	0.0	2.3	chr1	160643859	160643924	(88312498)	+	L1ME4b	LINE/L1	730	805	(119)	236060
869	28.9	1.2	6.5	chr1	161046495	161046757	(87909665)	+	MIRb	SINE/MIR	5	253	(15)	236761
24	19.9	1.3	6.2	chr1	161132588	161132666	(87823756)	+	(CCG)n	Simple_repeat	1	80	(0)	236931
688	0.0	0.0	0.0	chr1	161399700	161399772	(87556650)	C	tRNA-Val-GTG	tRNA	(3)	73	1	237470
642	0.0	0.0	0.0	chr1	161422093	161422164	(87534258)	C	tRNA-Glu-GAA	tRNA	(3)	72	1	237515
6644	8.0	2.8	2.5	chr1	161422259	161424316	(87532106)	+	SVA_D	Retroposon/SVA	14	1386	(0)	237516
681	0.0	0.0	0.0	chr1	161428077	161428150	(87528272)	C	tRNA-Asn-AAC	tRNA	(3)	74	1	237526
633	1.4	0.0	0.0	chr1	161523846	161523917	(87432505)	C	tRNA-Gly-GGY	tRNA	(2)	72	1	237663
583	9.6	0.0	0.0	chr1	161530342	161530424	(87425998)	C	tRNA-Leu-CTG	tRNA	(3)	83	1	237672
660	0.0	0.0	0.0	chr1	161531113	161531184	(87425238)	+	tRNA-Gly-GGA	tRNA	1	72	(3)	237673
645	1.4	0.0	0.0	chr1	161540241	161540314	(87416108)	+	tRNA-Asn-AAC	tRNA	1	74	(3)	237691
729	0.0	0.0	1.2	chr1	161611946	161612029	(87344393)	C	tRNA-Leu-CTG	tRNA	(3)	83	1	237809
503	10.0	0.0	0.0	chr1	161612718	161612787	(87343635)	+	tRNA-Gly-GGA	tRNA	1	70	(5)	237810
489	11.0	0.0	0.0	chr1	161621675	161621747	(87334675)	+	tRNA-Asn-AAC	tRNA	1	73	(4)	237826
12	25.5	0.0	0.0	chr1	161726750	161726786	(87229636)	+	(CGCGG)n	Simple_repeat	1	37	(0)	237995
654	0.0	0.0	0.0	chr1	167714725	167714796	(81241626)	+	tRNA-Pro-CCG	tRNA	1	72	(3)	247181
658	0.0	0.0	0.0	chr1	167715488	167715559	(81240863)	C	tRNA-Pro-CCY	tRNA	(3)	72	1	247182
2427	8.2	0.0	1.3	chr1	167753627	167753929	(81202493)	C	AluSx1	SINE/Alu	(13)	299	1	247253
472	26.9	7.8	6.1	chr1	170538686	170538899	(78417523)	C	Helitron2Na_Mam	RC?/Helitron?	(20)	304	87	251448
12	4.7	0.0	7.7	chr1	171741943	171741968	(77214454)	+	(CGGG)n	Simple_repeat	1	26	(0)	253260
43	0.0	0.0	0.0	chr1	172359126	172359162	(76597260)	+	(AC)n	Simple_repeat	1	37	(0)	254131
14	16.1	0.0	0.0	chr1	174022262	174022289	(74934133)	+	(CTG)n	Simple_repeat	1	28	(0)	256537
24	24.9	0.0	1.5	chr1	174022311	174022378	(74934044)	+	(CCT)n	Simple_repeat	1	68	(0)	256538
14	33.3	1.4	1.4	chr1	176207201	176207269	(72749153)	+	(CCG)n	Simple_repeat	1	70	(0)	259874
15	20.5	5.1	0.0	chr1	176207252	176207310	(72749112)	+	(GC)n	Simple_repeat	1	62	(0)	259875
1772	19.7	1.3	7.2	chr1	177931960	177932374	(71024048)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	262301
5716	22.9	7.2	4.4	chr1	180290944	180293294	(68663128)	C	L1ME1	LINE/L1	(199)	6775	4370	266156
18	19.2	2.7	6.6	chr1	181105313	181105386	(67851036)	+	(GCGCGG)n	Simple_repeat	1	76	(0)	267473
21	16.6	2.9	3.8	chr1	181105455	181105526	(67850896)	+	G-rich	Low_complexity	1	71	(0)	267474
851	21.8	9.5	3.0	chr1	181128017	181128213	(67828209)	+	AluJr	SINE/Alu	1	211	(101)	267518
716	24.1	4.4	0.6	chr1	181128231	181128405	(67828017)	+	MIRb	SINE/MIR	79	260	(8)	267519
186	32.4	5.1	9.8	chr1	181134599	181134680	(67821742)	C	MIR3	SINE/MIR	(84)	124	45	267528
3349	14.1	10.8	2.6	chr1	181430169	181430787	(67525635)	C	MER61F	LTR/ERV1	(0)	676	1	267978
316	32.1	10.4	0.0	chr1	181430832	181430943	(67525479)	+	MIRc	SINE/MIR	31	155	(113)	267979
267	22.6	16.0	0.0	chr1	182615673	182615756	(66340666)	C	MIR	SINE/MIR	(30)	232	133	269754
309	22.2	0.0	0.0	chr1	182615747	182615809	(66340613)	C	MIR	SINE/MIR	(188)	74	12	269754
236	26.7	8.8	5.2	chr1	182615816	182615969	(66340453)	C	L2a	LINE/L2	(41)	3385	3226	269755
383	30.7	9.7	5.8	chr1	182616033	182616340	(66340082)	C	MLT1N2	LTR/ERVL-MaLR	(31)	531	211	269756
183	28.1	15.9	5.1	chr1	183105423	183105617	(65850805)	+	MIRc	SINE/MIR	6	225	(43)	270575
448	30.3	1.5	2.2	chr1	192516650	192516784	(56439638)	C	L2c	LINE/L2	(3)	3384	3251	283500
1376	9.4	18.0	0.0	chr1	192559496	192559728	(56396694)	+	Tigger1	DNA/TcMar-Tigger	1497	1780	(638)	283551
2857	17.6	1.9	0.0	chr1	192559727	192560232	(56396190)	C	Tigger1	DNA/TcMar-Tigger	(1902)	516	1	283550
197	34.6	12.3	0.0	chr1	192577972	192578078	(56378344)	+	MIR3	SINE/MIR	68	189	(19)	283571
204	34.9	5.1	10.2	chr1	192580340	192580505	(56375917)	C	MER5A	DNA/hAT-Charlie	(0)	189	33	283575
738	25.5	8.4	1.8	chr1	198598678	198598953	(50357469)	C	MLT1I	LTR/ERVL-MaLR	(7)	404	109	291433
12	4.7	4.5	0.0	chr1	203327305	203327326	(45629096)	+	(CACC)n	Simple_repeat	1	23	(0)	299418
15	13.7	0.0	0.0	chr1	203466495	203466518	(45489904)	+	(AC)n	Simple_repeat	1	24	(0)	299650
777	24.4	6.4	4.7	chr1	203466578	203466809	(45489613)	+	MIR	SINE/MIR	23	258	(4)	299651
2460	9.1	0.0	0.0	chr1	204506171	204506479	(44449943)	+	AluSc	SINE/Alu	1	309	(0)	301656
656	1.4	0.0	0.0	chr1	204506527	204506599	(44449823)	+	tRNA-Lys-AAA	tRNA	1	73	(3)	301657
696	19.4	4.0	0.0	chr1	204506878	204507021	(44449401)	+	L1MA8	LINE/L1	6142	6291	(0)	301658
661	2.7	0.0	0.0	chr1	204507028	204507102	(44449320)	C	tRNA-Lys-AAA	tRNA	(1)	75	1	301659
287	37.2	8.8	0.0	chr1	204513089	204513233	(44443189)	C	MIR3	SINE/MIR	(21)	187	29	301678
231	20.8	15.1	5.9	chr1	204513227	204513328	(44443094)	+	L3	LINE/CR1	2793	2905	(1194)	301679
293	11.8	0.0	0.0	chr1	204513329	204513379	(44443043)	C	Alu	SINE/Alu	(0)	301	251	301680
1018	14.7	0.0	0.0	chr1	204513380	204513522	(44442900)	+	AluSc	SINE/Alu	138	280	(29)	301681
2413	8.5	0.0	0.7	chr1	205657267	205657571	(43298851)	C	AluSq2	SINE/Alu	(6)	307	5	303866
330	31.9	14.2	4.8	chr1	207414515	207414895	(41541527)	C	MamGypLTR1c	LTR/Gypsy	(110)	674	266	306618
45	2.4	0.0	0.0	chr1	207824032	207824074	(41132348)	+	(CT)n	Simple_repeat	1	43	(0)	307172
730	9.9	1.8	1.8	chr1	210374156	210374268	(38582154)	C	U5	snRNA	(2)	114	2	311068
274	30.2	4.5	8.9	chr1	210393685	210393942	(38562480)	C	MamSINE1	SINE/tRNA-RTE	(32)	258	13	311101
15	20.4	0.0	0.0	chr1	211259202	211259230	(37697192)	+	(C)n	Simple_repeat	1	29	(0)	312388
443	19.2	12.0	3.9	chr1	212415197	212415326	(36541096)	C	MIRc	SINE/MIR	(5)	263	122	314462
8037	12.2	2.8	3.3	chr1	215583662	215584977	(33371445)	C	MER41-int	LTR/ERV1	(0)	5946	4639	319268
26	0.0	0.0	0.0	chr1	221643432	221643456	(27312966)	+	(AAAT)n	Simple_repeat	1	25	(0)	327961
299	28.7	15.9	1.4	chr1	221643457	221643523	(27312899)	C	MIR3	SINE/MIR	(90)	118	39	327960
700	28.1	6.0	1.0	chr1	221761793	221761997	(27194425)	C	MIRb	SINE/MIR	(0)	268	53	328135
639	24.7	3.7	0.6	chr1	221775607	221775765	(27180657)	+	MER5A1	DNA/hAT-Charlie	1	164	(2)	328170
367	27.9	1.8	4.6	chr1	222464743	222464915	(26491507)	C	L1ME4c	LINE/L1	(101)	729	562	329166
573	5.3	0.0	0.0	chr1	222465005	222465079	(26491343)	+	tRNA-Thr-ACA	tRNA	1	75	(1)	329167
550	26.9	1.9	0.0	chr1	223190581	223190736	(25765686)	C	MamRep564	Unknown	(130)	227	69	330354
14	5.0	0.0	0.0	chr1	224183257	224183277	(24773145)	+	(GCC)n	Simple_repeat	1	21	(0)	331975
14	18.3	2.5	2.4	chr1	225427783	225427822	(23528600)	+	GA-rich	Low_complexity	1	41	(0)	333957
16	16.4	5.0	4.8	chr1	226870678	226870737	(22085685)	+	(GGCCTGG)n	Simple_repeat	1	63	(0)	336619
619	24.4	7.7	0.6	chr1	231422715	231422871	(17533551)	C	MIRb	SINE/MIR	(96)	172	4	343475
426	31.8	7.5	1.4	chr1	233897210	233897424	(15058998)	C	MIRb	SINE/MIR	(0)	262	26	347060
475	26.8	0.0	1.6	chr1	233897443	233897571	(15058851)	+	L3	LINE/CR1	3391	3517	(582)	347061
476	24.8	11.6	0.7	chr1	233897600	233897745	(15058677)	C	MIR	SINE/MIR	(33)	229	66	347062
300	31.0	9.8	0.0	chr1	234373847	234373975	(14582447)	C	MIRb	SINE/MIR	(86)	182	40	347763
14	16.2	1.8	8.6	chr1	234608656	234608712	(14347710)	+	(GCGGCC)n	Simple_repeat	1	58	(0)	348163
16	25.9	0.0	1.9	chr1	234610920	234610971	(14345451)	+	G-rich	Low_complexity	1	52	(0)	348168
470	28.6	2.6	4.8	chr1	234882425	234882718	(14073704)	+	L2c	LINE/L2	2989	3268	(107)	348601
16	27.4	1.9	0.0	chr1	234962493	234962545	(13993877)	+	(ACAT)n	Simple_repeat	1	54	(0)	348744
13	22.5	3.6	3.5	chr1	235504156	235504218	(13452204)	+	(CGCAGG)n	Simple_repeat	1	63	(0)	349877
180	26.8	4.0	4.0	chr1	236067088	236067161	(12889261)	+	L2c	LINE/L2	3010	3083	(292)	350916
2686	7.0	0.0	1.1	chr1	236161556	236161914	(12794508)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	351120
631	28.6	14.6	0.9	chr1	236458061	236458409	(12498013)	+	L1ME4b	LINE/L1	247	651	(241)	351672
2176	7.2	0.7	0.0	chr1	244833995	244834271	(4122151)	C	AluSq4	SINE/Alu	(31)	280	2	364891
31	3.3	0.0	0.0	chr1	244941092	244941122	(4015300)	+	(AC)n	Simple_repeat	1	31	(0)	365116
692	16.0	4.3	7.1	chr1	244941123	244941261	(4015161)	C	MER33	DNA/hAT-Charlie	(157)	167	30	365077
1312	10.2	0.0	0.6	chr1	244941392	244941567	(4014855)	+	AluSp	SINE/Alu	123	297	(16)	365117
1254	17.6	1.3	0.9	chr1	245990644	245990872	(2965550)	+	MLT1D	LTR/ERVL-MaLR	267	496	(9)	366786
1267	22.2	7.5	2.4	chr1	247077925	247078265	(1878157)	+	MER57E3	LTR/ERV1	128	487	(0)	368617
4117	13.4	1.1	1.3	chr1	247367907	247368541	(1587881)	+	MER41B	LTR/ERV1	1	634	(0)	369035
268	32.5	2.5	4.9	chr1	247410165	247410326	(1546096)	C	MamGypLTR2c	LTR/Gypsy	(98)	970	813	369127
421	32.2	12.0	1.6	chr1	247439704	247440009	(1516413)	C	L1ME3G	LINE/L1	(259)	665	324	369182
284	32.8	12.1	1.1	chr1	247440372	247440547	(1515875)	+	L2	LINE/L2	2731	2928	(491)	369177
229	32.1	5.9	3.1	chr1	248819103	248819298	(137124)	C	L4_A_Mam	LINE/RTE-X	(15)	4975	4774	370847
1540	9.9	2.6	1.3	chr1	248819299	248819419	(137003)	C	MER30	DNA/hAT-Charlie	(1)	229	108	370848
608	0.0	0.0	21.5	chr1	248873855	248873961	(82461)	+	tRNA-Leu-TTG	tRNA	1	84	(2)	370918
629	1.4	0.0	0.0	chr1	248874248	248874319	(82103)	+	tRNA-Glu-GAG_	tRNA	1	72	(3)	370919
227	17.5	2.4	0.0	chr1	248874345	248874384	(82038)	C	MER66C	LTR/ERV1	(148)	407	367	370920
347	32.6	6.0	2.8	chr10	3839169	3839345	(129958077)	C	L4_A_Mam	LINE/RTE-X	(155)	4835	4653	375624
17	18.6	2.2	2.1	chr10	3839480	3839529	(129957893)	+	(ATAT)n	Simple_repeat	1	50	(0)	375625
23	24.3	1.1	5.4	chr10	6088932	6088964	(127708458)	+	G-rich	Low_complexity	1	92	(0)	378878
31	13.2	1.7	0.0	chr10	6088965	6089022	(127708400)	+	(GGCGCA)n	Simple_repeat	1	59	(0)	378879
16	10.3	2.9	2.9	chr10	6089432	6089465	(127707957)	+	(CCT)n	Simple_repeat	1	35	(0)	378880
13	9.2	2.4	9.3	chr10	6163681	6163722	(127633700)	+	G-rich	Low_complexity	1	43	(0)	379017
2634	21.3	7.5	1.5	chr10	6266970	6267623	(127529799)	C	MER45B	DNA/hAT-Tip100	(68)	972	277	379212
2339	10.2	0.0	0.6	chr10	6269850	6270162	(127527260)	+	AluSq2	SINE/Alu	2	312	(1)	379219
618	31.6	10.5	5.6	chr10	6270351	6270940	(127526482)	+	L2c	LINE/L2	2775	3386	(1)	379220
467	27.6	0.0	1.6	chr10	11178199	11178327	(122619095)	C	LFSINE_Vert	SINE/tRNA	(238)	221	95	386577
243	34.7	10.7	1.8	chr10	11245883	11246054	(122551368)	+	MIR1_Amn	SINE/MIR	1	185	(23)	386644
1429	16.1	3.1	4.7	chr10	11710781	11711079	(122086343)	+	L1MB2	LINE/L1	5834	6127	(44)	387381
2225	11.3	0.0	0.0	chr10	11711083	11711365	(122086057)	+	AluSx	SINE/Alu	1	283	(29)	387382
1047	10.3	0.0	0.0	chr10	12068364	12068499	(121728923)	C	AluSx	SINE/Alu	(176)	136	1	388081
16	11.7	5.4	0.0	chr10	12129500	12129536	(121667886)	+	G-rich	Low_complexity	1	39	(0)	388252
253	19.7	2.9	4.3	chr10	14648360	14648428	(119148994)	C	UCON25	Unknown	(116)	159	92	392807
199	26.0	13.5	0.0	chr10	14960106	14960201	(118837221)	C	MIR3	SINE/MIR	(34)	174	64	393370
17	14.4	5.1	0.0	chr10	18399521	18399559	(115397863)	+	G-rich	Low_complexity	1	41	(0)	399038
834	15.8	0.0	0.0	chr10	18399562	18399681	(115397741)	C	FLAM_C	SINE/Alu	(22)	121	2	399039
673	0.0	0.0	0.0	chr10	22229508	22229582	(111567840)	C	tRNA-Asn-AAC	tRNA	(2)	75	1	404961
12	19.9	2.3	4.4	chr10	22325817	22325860	(111471562)	+	(CCCGGC)n	Simple_repeat	1	45	(0)	405123
17	20.6	6.1	2.9	chr10	22714404	22714471	(111082951)	+	(GCC)n	Simple_repeat	1	70	(0)	405680
443	15.8	0.7	3.8	chr10	22714478	22714635	(111082787)	C	LTR27E	LTR/ERV1	(91)	986	834	405681
836	13.4	2.3	3.7	chr10	24643880	24644013	(109153409)	C	AluJr	SINE/Alu	(180)	132	1	408803
4754	23.0	2.7	1.1	chr10	26334604	26335915	(107461507)	C	L1M3f	LINE/L1	(4981)	2584	1251	411458
785	26.1	3.2	2.8	chr10	26437829	26438080	(107359342)	C	L1MC5a	LINE/L1	(2297)	480	228	411647
13	13.5	4.3	6.2	chr10	27252856	27252901	(106544521)	+	(GCGCCGG)n	Simple_repeat	1	48	(0)	413156
2299	8.1	3.3	0.0	chr10	38011303	38011597	(95785825)	+	AluSq2	SINE/Alu	1	305	(8)	430418
13	19.8	1.6	8.1	chr10	43407227	43407287	(90390135)	+	(GCCGCC)n	Simple_repeat	1	62	(0)	433435
24	20.4	3.5	4.5	chr10	45001106	45001191	(88796231)	+	G-rich	Low_complexity	1	89	(0)	435515
16	23.5	6.4	2.4	chr10	45672536	45672613	(88124809)	+	(CGCCAG)n	Simple_repeat	1	83	(0)	436407
13	36.1	0.0	2.6	chr10	45672635	45672657	(88124765)	+	(GCCC)n	Simple_repeat	1	76	(0)	436408
14	26.7	0.0	3.8	chr10	45672658	45672710	(88124712)	+	(CGCT)n	Simple_repeat	1	53	(0)	436409
11	18.4	6.7	2.1	chr10	48306614	48306658	(85490764)	+	(GCGCGT)n	Simple_repeat	1	48	(0)	440378
15	20.1	0.0	0.0	chr10	48306885	48306918	(85490504)	+	(GCC)n	Simple_repeat	1	34	(0)	440379
15659	14.6	4.1	1.2	chr10	48336815	48340545	(85456877)	+	L1PA17	LINE/L1	2318	6152	(14)	440429
359	30.9	3.5	3.5	chr10	48802824	48802967	(84994455)	+	MIRb	SINE/MIR	53	196	(72)	441054
200	24.8	20.4	3.2	chr10	50508327	50508451	(83288971)	+	MIRb	SINE/MIR	7	158	(110)	443456
189	25.6	14.6	5.8	chr10	50508583	50508669	(83288753)	C	MamTip2	DNA/hAT-Tip100	(133)	172	77	443457
16	9.1	2.6	5.0	chr10	50623872	50623910	(83173512)	+	(CCCGCCG)n	Simple_repeat	1	40	(0)	443660
193	33.6	7.9	2.5	chr10	58266391	58266509	(75530913)	+	MIRc	SINE/MIR	21	146	(122)	453879
297	22.9	0.0	0.0	chr10	59007660	59007720	(74789702)	+	MLT1K	LTR/ERVL-MaLR	36	96	(499)	454925
741	27.4	9.5	2.7	chr10	59007717	59008050	(74789372)	+	MLT1K	LTR/ERVL-MaLR	231	589	(6)	454925
270	32.3	9.9	5.6	chr10	59885563	59885831	(73911591)	+	L2c	LINE/L2	2916	3197	(190)	456242
1164	17.7	1.8	3.1	chr10	60236804	60237030	(73560392)	C	MER58A	DNA/hAT-Charlie	(0)	224	1	456766
21	10.3	4.8	0.0	chr10	61903867	61903908	(71893514)	+	(CCCCTCC)n	Simple_repeat	1	44	(0)	459253
12	21.8	2.7	0.0	chr10	62653336	62653372	(71144050)	+	(AACAGAA)n	Simple_repeat	1	38	(0)	460413
505	22.9	2.8	0.0	chr10	62732817	62732921	(71064501)	C	MIRb	SINE/MIR	(91)	177	70	460527
285	26.9	0.9	15.0	chr10	62732977	62733103	(71064319)	+	L2b	LINE/L2	3277	3387	(0)	460528
14	15.2	0.0	7.1	chr10	63521224	63521265	(70276157)	+	(GCCCTG)n	Simple_repeat	1	42	(0)	461935
474	27.1	10.3	2.7	chr10	64041134	64041357	(69756065)	C	L1M3e	LINE/L1	(5425)	2140	1898	462798
226	18.8	0.0	0.0	chr10	64041385	64041432	(69755990)	C	L1M3e	LINE/L1	(4635)	1930	1883	462798
462	29.0	1.6	0.8	chr10	64041466	64041673	(69755749)	C	L1M3e	LINE/L1	(6676)	813	653	462798
737	0.0	0.0	0.0	chr10	67764503	67764584	(66032838)	+	tRNA-Ser-TCA	tRNA	1	82	(3)	467832
301	25.4	8.5	3.0	chr10	69061995	69062128	(64735294)	C	MIRb	SINE/MIR	(119)	149	8	470770
33	5.2	0.0	0.0	chr10	70132752	70132791	(63664631)	+	(CGCTCC)n	Simple_repeat	1	40	(0)	472807
19	15.1	0.0	0.0	chr10	72297844	72297880	(61499542)	+	(TCCGCC)n	Simple_repeat	1	37	(0)	476990
645	19.3	5.8	0.7	chr10	73088248	73088393	(60709029)	+	LTR52	LTR/ERVL	3	156	(265)	478581
243	31.1	4.6	0.0	chr10	73088413	73088515	(60708907)	+	LTR52	LTR/ERVL	114	221	(200)	478581
285	31.9	5.0	2.6	chr10	73849442	73849557	(59947865)	C	MIR3	SINE/MIR	(4)	204	86	480025
527	28.0	3.6	3.3	chr10	73879934	73880123	(59917299)	C	MIRb	SINE/MIR	(8)	260	60	480076
192	35.2	6.4	1.1	chr10	74058802	74058890	(59738532)	+	MamSINE1	SINE/tRNA-RTE	75	168	(122)	480497
21	14.8	0.0	0.0	chr10	74058891	74058929	(59738493)	+	(GTGTGC)n	Simple_repeat	1	39	(0)	480498
16	5.3	0.0	0.0	chr10	74058929	74058948	(59738474)	+	(GA)n	Simple_repeat	1	20	(0)	480499
281	20.2	17.4	8.8	chr10	74871831	74871955	(58925467)	+	MIRc	SINE/MIR	43	180	(88)	482037
921	24.1	4.0	1.2	chr10	75013658	75013897	(58783525)	C	MIR	SINE/MIR	(0)	262	16	482271
1351	17.9	7.8	11.2	chr10	75014028	75014193	(58783229)	+	Charlie1b	DNA/hAT-Charlie	52	215	(308)	482272
1547	16.6	0.3	4.8	chr10	75611346	75611669	(58185753)	C	L1MB3	LINE/L1	(127)	6173	5867	483353
47	0.0	0.0	0.0	chr10	77491715	77491754	(56305668)	+	(AC)n	Simple_repeat	1	40	(0)	486022
17	6.8	6.5	0.0	chr10	79068813	79068843	(54728579)	+	(GCG)n	Simple_repeat	1	33	(0)	488999
18	24.2	4.2	5.0	chr10	86377301	86377396	(47420026)	+	(CGCAGG)n	Simple_repeat	1	100	(0)	499385
18	20.3	2.2	0.0	chr10	86521644	86521688	(47275734)	+	(GCC)n	Simple_repeat	1	46	(0)	499653
16	9.3	2.6	5.1	chr10	87863519	87863556	(45933866)	+	(GGCG)n	Simple_repeat	1	39	(0)	501931
22	30.2	2.0	2.9	chr10	87863717	87863818	(45933604)	+	(CGG)n	Simple_repeat	1	104	(0)	501932
16	12.8	2.8	2.7	chr10	89645039	89645074	(44152348)	+	(CTC)n	Simple_repeat	1	37	(0)	504723
2279	10.6	0.0	0.3	chr10	92101625	92101925	(41695497)	+	AluSz	SINE/Alu	1	300	(12)	508391
2367	9.2	0.0	0.7	chr10	92434805	92435107	(41362315)	+	AluSg	SINE/Alu	1	301	(9)	509118
221	32.3	0.0	4.1	chr10	92435228	92435324	(41362098)	+	MER5B	DNA/hAT-Charlie	1	93	(85)	509119
895	32.3	5.5	4.2	chr10	92742280	92743188	(41054234)	C	L2c	LINE/L2	(226)	3161	2239	509798
28	0.0	0.0	0.0	chr10	93702523	93702548	(40094874)	+	(CCG)n	Simple_repeat	1	26	(0)	511624
336	34.1	3.7	1.5	chr10	95758445	95758575	(38038847)	+	L2c	LINE/L2	3112	3245	(142)	514854
360	30.7	13.3	1.0	chr10	95791477	95791680	(38005742)	+	L3	LINE/CR1	3820	4052	(47)	514905
331	19.6	3.0	9.3	chr10	95791702	95791808	(38005614)	C	MER5B	DNA/hAT-Charlie	(11)	167	68	514911
208	24.0	0.0	2.0	chr10	95791824	95791874	(38005548)	+	L3	LINE/CR1	4039	4088	(11)	514905
209	26.2	16.3	1.0	chr10	96587309	96587412	(37210010)	+	MIRc	SINE/MIR	84	206	(62)	516222
11	17.2	7.7	0.0	chr10	96720027	96720065	(37077357)	+	(TCGCCTC)n	Simple_repeat	1	42	(0)	516502
18	25.0	4.0	3.8	chr10	96832884	96832959	(36964463)	+	(CG)n	Simple_repeat	1	79	(0)	516804
11	16.5	5.9	0.0	chr10	96832966	96832999	(36964423)	+	(GAGGTG)n	Simple_repeat	1	36	(0)	516805
12	21.2	2.1	4.2	chr10	100009959	100010005	(33787417)	+	(CCGCCT)n	Simple_repeat	1	48	(0)	522513
15	17.0	6.2	2.0	chr10	101694328	101694375	(32103047)	+	G-rich	Low_complexity	1	51	(0)	525476
12	15.3	5.3	2.5	chr10	101695111	101695148	(32102274)	+	(GCCCGA)n	Simple_repeat	1	40	(0)	525478
2233	10.5	0.7	0.3	chr10	102003167	102003461	(31793961)	C	AluSx1	SINE/Alu	(16)	296	1	526070
26	14.1	8.6	0.0	chr10	102918607	102918676	(30878746)	+	(GCGGCT)n	Simple_repeat	1	76	(0)	527859
27	8.6	0.0	0.0	chr10	110388304	110388340	(23409082)	+	(TC)n	Simple_repeat	1	37	(0)	539393
394	38.8	2.8	0.0	chr10	110774016	110774224	(23023198)	+	MIRc	SINE/MIR	8	222	(46)	540130
654	23.2	4.3	3.8	chr10	110842658	110842841	(22954581)	C	MIRb	SINE/MIR	(81)	187	3	540251
11	26.8	3.6	1.8	chr10	113961293	113961347	(19836075)	+	(CACAAG)n	Simple_repeat	1	57	(0)	545148
38	0.0	0.0	0.0	chr10	113961425	113961457	(19835965)	+	(CA)n	Simple_repeat	1	33	(0)	545149
873	27.4	7.1	3.5	chr10	117656644	117656984	(16140438)	C	HAL1b	LINE/L1	(193)	2228	1875	550835
1797	24.6	10.1	6.0	chr10	117657005	117657844	(16139578)	C	HAL1b	LINE/L1	(628)	1793	915	550835
882	19.4	9.1	2.4	chr10	119120648	119120853	(14676569)	C	MER58A	DNA/hAT-Charlie	(0)	224	4	553262
2982	18.0	2.8	6.7	chr10	119477209	119477642	(14319780)	C	L1MD1	LINE/L1	(571)	5671	5234	553955
4200	9.6	0.4	0.0	chr10	119687865	119688416	(14109006)	C	MER41A	LTR/ERV1	(0)	554	1	554382
638	34.1	10.8	5.2	chr10	119693456	119694108	(14103314)	+	L2c	LINE/L2	1924	2620	(799)	554394
783	16.4	0.0	0.0	chr10	119704816	119704931	(14092491)	+	AluJr	SINE/Alu	9	124	(188)	554420
18	10.5	0.0	0.0	chr10	121975069	121975099	(11822323)	+	(GGGAGC)n	Simple_repeat	1	31	(0)	558054
14	15.2	0.0	7.1	chr10	121975098	121975152	(11822270)	+	(GGCCGC)n	Simple_repeat	1	51	(0)	558055
39	0.0	0.0	0.0	chr10	122980724	122980759	(10816663)	+	(GCGGG)n	Simple_repeat	1	36	(0)	559574
857	26.7	4.4	2.8	chr10	122980993	122981118	(10816304)	C	MamRep137	DNA/TcMar-Tigger	(23)	487	353	559575
373	27.9	3.5	2.6	chr10	123994981	123995094	(9802328)	C	MIR3	SINE/MIR	(13)	195	81	561210
296	30.1	2.6	8.9	chr10	124286108	124286231	(9511191)	+	HAL1ME	LINE/L1	2336	2451	(14)	561632
16	15.4	2.8	0.0	chr10	124461792	124461827	(9335595)	+	(GCGCCG)n	Simple_repeat	1	37	(0)	561977
25	2.3	1.9	9.3	chr10	124744316	124744368	(9053054)	+	(GGC)n	Simple_repeat	1	54	(0)	562382
22	13.7	6.2	5.8	chr10	124744369	124744389	(9053033)	+	(GGCGGCA)n	Simple_repeat	19	86	(0)	562381
22	22.4	5.0	3.8	chr10	124744458	124744557	(9052865)	+	(GCCGCGC)n	Simple_repeat	1	105	(0)	562383
16	10.1	2.9	2.9	chr10	124917084	124917117	(8880305)	+	(GGC)n	Simple_repeat	1	35	(0)	562765
39	2.6	0.0	0.0	chr10	124917175	124917214	(8880208)	+	(CGC)n	Simple_repeat	1	40	(0)	562766
17	16.4	0.0	0.0	chr10	124917226	124917259	(8880163)	+	GA-rich	Low_complexity	1	34	(0)	562767
1579	12.2	0.0	0.0	chr10	133307550	133307763	(489659)	+	AluSz6	SINE/Alu	88	301	(11)	572364
590	23.1	6.5	1.1	chr10	133307770	133307944	(489478)	C	Tigger3c	DNA/TcMar-Tigger	(47)	555	371	572365
809	17.2	0.7	6.8	chr10	133307945	133308107	(489315)	+	AluJo	SINE/Alu	121	273	(39)	572366
16	19.2	2.0	3.9	chr11	568893	568952	(134517670)	+	(CGCCCCG)n	Simple_repeat	1	58	(0)	573570
19	23.2	2.4	5.8	chr11	576493	576576	(134510046)	+	(CGG)n	Simple_repeat	1	86	(0)	573583
22	13.2	10.3	1.3	chr11	925798	925865	(134160757)	+	(CGTG)n	Simple_repeat	1	75	(0)	574110
37	26.7	3.7	5.3	chr11	926095	926311	(134160311)	+	G-rich	Low_complexity	1	225	(0)	574111
24	7.7	2.3	2.2	chr11	2992031	2992074	(132094548)	+	(CCAGGCC)n	Simple_repeat	1	45	(0)	576411
12	4.2	0.0	10.0	chr11	3840729	3840758	(131245864)	+	(CCCG)n	Simple_repeat	1	30	(0)	577809
15	27.9	0.0	9.7	chr11	3840910	3841023	(131245599)	+	G-rich	Low_complexity	1	114	(0)	577810
17	29.6	0.0	2.9	chr11	6611930	6611998	(128474624)	+	(CCCCG)n	Simple_repeat	1	69	(0)	581578
617	11.3	0.4	0.4	chr11	7986876	7986981	(127099641)	C	FLAM_C	SINE/Alu	(196)	106	1	583340
11	20.5	5.1	0.0	chr11	9461144	9461182	(125625440)	+	(CGGCTC)n	Simple_repeat	1	41	(0)	585847
15	25.2	1.7	3.3	chr11	9758131	9758190	(125328432)	+	(GTGGC)n	Simple_repeat	1	61	(0)	586500
327	26.7	11.0	4.0	chr11	10762221	10762372	(124324250)	C	L2c	LINE/L2	(0)	3426	3256	588092
347	29.8	13.9	1.0	chr11	10856705	10856904	(124229718)	C	MIRb	SINE/MIR	(21)	247	18	588253
2191	25.5	7.6	2.1	chr11	13046585	13047290	(122039332)	+	MER72B	LTR/ERV1	6	753	(15)	591719
584	32.0	9.7	3.5	chr11	13047351	13047774	(122038848)	+	L2	LINE/L2	1576	2028	(1391)	591720
3246	18.4	2.4	4.3	chr11	13047889	13048521	(122038101)	C	L1MB7	LINE/L1	(1)	6183	5565	591721
17	20.8	0.0	2.2	chr11	13277863	13277908	(121808714)	+	G-rich	Low_complexity	1	46	(0)	592126
17	4.3	0.0	0.0	chr11	13668730	13668753	(121417869)	+	(GCG)n	Simple_repeat	1	24	(0)	592646
12	12.1	7.9	2.4	chr11	14358947	14358984	(120727638)	+	G-rich	Low_complexity	1	41	(0)	593749
15	11.7	0.0	3.3	chr11	18105972	18106001	(116980621)	+	(CTC)n	Simple_repeat	1	30	(0)	599909
2297	13.2	6.3	6.7	chr11	18770124	18770603	(116316019)	C	L1MB5	LINE/L1	(0)	6174	5697	601190
1897	19.5	4.3	0.5	chr11	22657143	22657519	(112429103)	C	MER74C	LTR/ERVL	(0)	460	69	607280
18	18.3	2.7	0.0	chr11	22657537	22657573	(112429049)	+	(CA)n	Simple_repeat	1	38	(0)	607281
4728	28.2	11.8	1.1	chr11	26651891	26653847	(108432775)	+	L2a	LINE/L2	1018	3224	(202)	612779
605	30.9	11.3	4.8	chr11	27233720	27234198	(107852424)	C	LTR33	LTR/ERVL	(0)	515	2	613634
2364	19.5	16.9	1.1	chr11	27894566	27895197	(107191425)	C	L1MC4	LINE/L1	(2)	8040	7309	614726
195	30.4	0.0	0.0	chr11	29294020	29294065	(105792557)	+	MamRTE1	LINE/RTE-BovB	3714	3759	(53)	616807
3280	5.3	0.1	0.0	chr11	31696635	31697206	(103389416)	+	L1PA5	LINE/L1	1977	2533	(3613)	620311
207	28.7	12.7	0.0	chr11	31697226	31697329	(103389293)	+	MIRb	SINE/MIR	73	188	(80)	620312
19	20.9	5.9	1.4	chr11	33257311	33257378	(101829244)	+	(GGCGGA)n	Simple_repeat	1	72	(0)	623167
17	26.8	3.8	2.4	chr11	34052227	34052305	(101034317)	+	(GCGCCC)n	Simple_repeat	1	82	(0)	624603
196	24.3	7.9	9.1	chr11	34235177	34235253	(100851369)	+	L2a	LINE/L2	3266	3341	(85)	624892
524	23.2	11.4	1.3	chr11	34235328	34235484	(100851138)	+	MIRb	SINE/MIR	93	267	(1)	624893
2327	9.0	0.7	0.0	chr11	34248850	34249150	(100837472)	+	AluSp	SINE/Alu	2	304	(9)	624921
290	34.2	6.2	2.5	chr11	41428290	41428490	(93658132)	C	L2a	LINE/L2	(800)	2619	2411	635416
464	29.3	4.6	0.5	chr11	43881084	43881272	(91205350)	C	MIRb	SINE/MIR	(50)	218	22	639138
372	24.4	10.8	2.5	chr11	44559858	44559975	(90526647)	+	MIR	SINE/MIR	65	193	(69)	640361
13	13.5	6.1	0.0	chr11	45147283	45147315	(89939307)	+	(GACGCG)n	Simple_repeat	1	35	(0)	641575
19	24.1	0.0	3.5	chr11	46121972	46122029	(88964593)	+	(GCG)n	Simple_repeat	1	58	(0)	643320
13	10.4	4.5	11.6	chr11	46122043	46122108	(88964514)	+	(CCGGCAG)n	Simple_repeat	1	69	(0)	643321
17	16.6	7.3	0.0	chr11	46347517	46347557	(88739065)	+	(GC)n	Simple_repeat	1	44	(0)	643816
29	30.2	1.6	2.3	chr11	47552994	47553120	(87533502)	+	(GCCGCT)n	Simple_repeat	1	126	(0)	646144
15	6.8	0.0	10.3	chr11	47553169	47553207	(87533415)	+	G-rich	Low_complexity	1	39	(0)	646145
16	18.4	8.4	2.6	chr11	47553221	47553291	(87533331)	+	(GCGCCGA)n	Simple_repeat	1	77	(0)	646146
261	31.6	4.9	1.3	chr11	57568015	57568171	(77518451)	C	MamRep1879	DNA/hAT-Tip100?	(49)	167	5	654006
208	31.7	0.0	0.0	chr11	58503757	58503816	(76582806)	+	MIRc	SINE/MIR	85	144	(124)	655584
11243	11.6	3.0	0.5	chr11	58646399	58648187	(76438435)	C	L1PBa	LINE/L1	(5027)	1836	3	655792
2218	13.9	3.3	2.5	chr11	59199994	59200354	(75886268)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	656484
681	0.0	0.0	0.0	chr11	59550629	59550701	(75535921)	C	tRNA-Val-GTA	tRNA	(3)	73	1	656945
670	1.4	0.0	0.0	chr11	59550986	59551059	(75535563)	C	tRNA-Val-GTA	tRNA	(2)	74	1	656946
670	8.4	0.0	0.0	chr11	59551755	59551837	(75534785)	+	tRNA-Leu-TTA	tRNA	1	83	(3)	656948
632	2.7	0.0	0.0	chr11	59556429	59556501	(75530121)	+	tRNA-Lys-AAA	tRNA	1	73	(3)	656960
661	1.4	0.0	0.0	chr11	59557497	59557569	(75529053)	C	tRNA-Phe-TTY	tRNA	(3)	73	1	656962
20	13.3	2.3	2.3	chr11	59557606	59557622	(75529000)	+	(TAA)n	Simple_repeat	1	18	(0)	656963
2303	7.3	0.0	1.1	chr11	59557623	59557909	(75528713)	+	AluSq2	SINE/Alu	3	286	(27)	656964
656	1.4	0.0	0.0	chr11	59560335	59560407	(75526215)	C	tRNA-Lys-AAA	tRNA	(3)	73	1	656970
682	0.0	0.0	0.0	chr11	59566380	59566452	(75520170)	C	tRNA-Phe-TTY	tRNA	(3)	73	1	656983
360	25.9	6.7	0.9	chr11	60763286	60763398	(74323224)	+	MIRc	SINE/MIR	2	121	(147)	658813
407	30.8	3.0	2.3	chr11	60763446	60763578	(74323044)	+	MIR	SINE/MIR	1	134	(128)	658814
240	29.2	0.0	1.5	chr11	60906807	60906872	(74179750)	C	MER5A	DNA/hAT-Charlie	(3)	186	122	659082
317	13.3	0.0	0.0	chr11	60910234	60910278	(74176344)	C	MER39	LTR/ERV1	(661)	46	2	659092
467	31.3	11.7	4.8	chr11	60910389	60910807	(74175815)	+	L2a	LINE/L2	2973	3424	(2)	659087
1692	25.3	6.1	3.4	chr11	61042867	61043456	(74043166)	C	L1ME2	LINE/L1	(8)	6156	5550	659380
18	13.6	4.9	0.0	chr11	61061569	61061614	(74025008)	+	(CCCACC)n	Simple_repeat	1	48	(0)	659425
22	27.2	3.5	4.2	chr11	61161308	61161421	(73925201)	+	(GCC)n	Simple_repeat	1	118	(0)	659603
353	28.2	4.0	9.6	chr11	61385525	61385681	(73700941)	C	ERVL-E-int	LTR/ERVL	(302)	5365	5218	660065
860	20.2	4.9	2.5	chr11	61385682	61385879	(73700743)	C	LTR41B	LTR/ERVL	(555)	203	1	660063
12	17.5	3.1	0.0	chr11	61827628	61827659	(73258963)	+	(CCCG)n	Simple_repeat	1	33	(0)	660908
18	8.7	7.4	5.2	chr11	62653254	62653307	(72433315)	+	(GAGCGC)n	Simple_repeat	1	58	(0)	662481
1657	2.7	0.0	0.0	chr11	62841624	62841809	(72244813)	C	U2	snRNA	(2)	186	1	662922
2320	9.2	0.0	0.0	chr11	63631700	63631993	(71454629)	+	AluSx1	SINE/Alu	1	294	(18)	664042
20	8.1	2.3	4.5	chr11	63671527	63671569	(71415053)	+	(CGAGG)n	Simple_repeat	1	44	(0)	664137
255	26.3	19.1	0.0	chr11	64331763	64331952	(70754670)	C	L2	LINE/L2	(348)	3071	2837	665407
13	14.3	2.2	8.5	chr11	65423133	65423178	(69663444)	+	GA-rich	Low_complexity	1	47	(0)	667512
332	31.3	6.2	8.0	chr11	65499662	65499925	(69586697)	+	L1M4c	LINE/L1	949	1207	(5177)	667663
1937	13.4	1.3	1.0	chr11	65506779	65507076	(69579546)	C	AluSx3	SINE/Alu	(12)	299	1	667666
326	32.0	9.9	1.1	chr11	65637684	65637857	(69448765)	+	MIRb	SINE/MIR	69	259	(9)	667878
281	29.7	11.7	0.8	chr11	65639883	65640011	(69446611)	+	MIRc	SINE/MIR	32	176	(92)	667881
12	10.5	0.0	10.5	chr11	65890604	65890641	(69195981)	+	(GCCCC)n	Simple_repeat	1	38	(0)	668358
15	14.5	5.3	0.0	chr11	65890689	65890726	(69195896)	+	(CGGAGC)n	Simple_repeat	1	40	(0)	668359
13	15.9	2.6	5.0	chr11	65890858	65890896	(69195726)	+	(GCG)n	Simple_repeat	1	40	(0)	668360
921	15.2	0.0	0.0	chr11	65896034	65896165	(69190457)	C	AluJr	SINE/Alu	(180)	132	1	668369
557	27.4	3.3	3.3	chr11	65896172	65896352	(69190270)	+	MIR	SINE/MIR	12	192	(70)	668370
1069	18.5	0.0	0.6	chr11	65909145	65909317	(69177305)	+	AluJo	SINE/Alu	129	300	(12)	668411
902	22.4	31.6	0.3	chr11	65909331	65909632	(69176990)	C	L1ME2	LINE/L1	(11)	6153	5756	668412
284	27.9	9.6	3.9	chr11	65918663	65918789	(69167833)	C	MIRc	SINE/MIR	(87)	181	47	668432
14	21.8	0.0	8.1	chr11	66277970	66278031	(68808591)	+	G-rich	Low_complexity	1	62	(0)	669165
14	21.2	0.0	7.1	chr11	66278127	66278182	(68808440)	+	(CCCCG)n	Simple_repeat	1	56	(0)	669166
728	2.4	0.0	0.0	chr11	66348120	66348201	(68738421)	+	tRNA-Ser-AGY	tRNA	1	82	(3)	669283
562	27.2	5.2	3.2	chr11	66408347	66408452	(68678170)	+	MIR	SINE/MIR	149	257	(5)	669458
35	24.7	2.6	5.1	chr11	66744642	66744682	(68341940)	+	(GGCGCG)n	Simple_repeat	1	64	(92)	670144
18	22.6	0.0	3.6	chr11	66744683	66744737	(68341885)	+	(GCGG)n	Simple_repeat	1	55	(0)	670145
2304	11.1	1.3	0.3	chr11	67213477	67213773	(67872849)	+	AluSx1	SINE/Alu	1	300	(12)	671235
18	25.0	3.5	4.4	chr11	67373349	67373435	(67713187)	+	(GCCCG)n	Simple_repeat	1	90	(0)	671516
15	22.5	0.0	4.0	chr11	67373395	67373444	(67713178)	+	(CCCCGG)n	Simple_repeat	1	50	(0)	671517
401	28.0	11.8	6.3	chr11	67436475	67436928	(67649694)	+	L2a	LINE/L2	2873	3380	(7)	671640
323	32.6	7.7	0.0	chr11	67486755	67486886	(67599736)	+	MIR3	SINE/MIR	31	173	(35)	671738
2180	9.6	0.3	0.7	chr11	67557706	67558006	(67528616)	C	AluSz	SINE/Alu	(12)	300	1	671879
17	24.9	3.7	3.6	chr11	67629812	67629892	(67456730)	+	(CCGCGG)n	Simple_repeat	1	84	(0)	672000
14	13.8	0.0	5.6	chr11	67629953	67629988	(67456634)	+	(GGCGA)n	Simple_repeat	1	36	(0)	672001
13	13.1	0.0	0.0	chr11	68004128	68004153	(67082469)	+	(CCCCG)n	Simple_repeat	1	26	(0)	672598
18	27.1	0.0	0.0	chr11	68004175	68004217	(67082405)	+	(GT)n	Simple_repeat	1	43	(0)	672599
488	16.4	0.0	0.0	chr11	68460147	68460219	(66626403)	C	tRNA-Ala-GCY	tRNA	(2)	74	2	673466
13	8.2	3.9	0.0	chr11	68460278	68460303	(66626319)	+	(CCCCG)n	Simple_repeat	1	27	(0)	673467
18	17.4	6.7	1.6	chr11	70270768	70270827	(64815795)	+	G-rich	Low_complexity	1	64	(0)	676599
11	27.7	0.0	0.0	chr11	70398499	70398537	(64688085)	+	(GGACCC)n	Simple_repeat	1	39	(0)	676806
18	18.1	0.0	0.0	chr11	74749032	74749069	(60337553)	+	(CGC)n	Simple_repeat	1	38	(0)	684743
435	25.7	11.6	2.8	chr11	76152846	76153057	(58933565)	C	MamGypLTR2c	LTR/Gypsy	(6)	1062	830	687420
675	1.3	0.0	0.0	chr11	76235513	76235587	(58851035)	+	tRNA-Pro-CCY	tRNA	1	75	(0)	687581
614	2.7	0.0	0.0	chr11	76235824	76235896	(58850726)	C	tRNA-Pro-CCA	tRNA	(2)	73	1	687582
618	31.3	5.4	1.6	chr11	76376987	76377236	(58709386)	+	L2a	LINE/L2	2153	2412	(1007)	687875
338	37.6	5.2	3.1	chr11	76424470	76424828	(58661794)	+	L2c	LINE/L2	2944	3310	(77)	687995
236	24.3	2.8	6.7	chr11	77047065	77047139	(58039483)	C	MER20B	DNA/hAT-Charlie	(710)	73	2	689156
301	22.5	0.9	4.3	chr11	77047188	77047260	(58039362)	+	L1M4	LINE/L1	4250	4322	(1824)	689155
1650	13.2	4.2	0.0	chr11	77047261	77047510	(58039112)	+	AluJb	SINE/Alu	44	304	(8)	689157
242	19.6	0.0	5.6	chr11	78140181	78140234	(56946388)	C	MER5A1	DNA/hAT-Charlie	(26)	140	90	691442
193	17.0	13.1	0.0	chr11	78140303	78140355	(56946267)	+	MIRc	SINE/MIR	85	145	(123)	691443
8381	10.0	3.7	3.4	chr11	82970492	82971932	(52114690)	+	LTR12C	LTR/ERV1	3	1434	(145)	699769
329	23.3	0.0	0.0	chr11	82971939	82972011	(52114611)	+	MADE2	DNA/TcMar-Mariner	8	80	(0)	699770
2613	4.8	0.7	1.0	chr11	83155782	83156073	(51930549)	C	AluSc	SINE/Alu	(18)	291	1	700164
219	37.2	11.0	0.8	chr11	86243978	86244107	(48842515)	C	MamRTE1	LINE/RTE-BovB	(1288)	2524	2380	705222
37	8.6	0.0	0.0	chr11	88301787	88301836	(46784786)	+	(CA)n	Simple_repeat	1	50	(0)	708337
16	17.0	0.0	0.0	chr11	93197794	93197826	(41888796)	+	(CGC)n	Simple_repeat	1	33	(0)	715244
4153	16.2	8.4	4.0	chr11	93511382	93512206	(41574416)	+	MER6	DNA/TcMar-Tigger	1	865	(0)	715672
3271	16.1	5.0	3.4	chr11	93512209	93512800	(41573822)	+	Tigger3c	DNA/TcMar-Tigger	1	602	(0)	715673
13	22.5	0.0	4.4	chr11	93543471	93543515	(41543107)	+	(GCCCCC)n	Simple_repeat	1	45	(0)	715720
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
18300	3.7	0.3	0.1	chr11	94238529	94241278	(40845344)	C	L1PA4	LINE/L1	(372)	5782	3028	716863
18	7.6	0.0	0.0	chr11	94543836	94543863	(40542759)	+	(CTCC)n	Simple_repeat	1	28	(0)	717311
16	23.0	3.9	0.0	chr11	95089758	95089808	(39996814)	+	(CCCGC)n	Simple_repeat	1	53	(0)	718109
12	27.7	0.0	0.0	chr11	95789478	95789516	(39297106)	+	(TCC)n	Simple_repeat	1	39	(0)	719160
15	4.3	4.2	0.0	chr11	96156274	96156297	(38930325)	+	(CCT)n	Simple_repeat	1	25	(0)	719718
40	4.9	0.0	0.0	chr11	102317589	102317631	(32768991)	+	(GT)n	Simple_repeat	1	43	(0)	727750
588	26.8	4.9	4.1	chr11	102318138	102318382	(32768240)	C	MIR	SINE/MIR	(8)	254	8	727751
883	22.8	4.8	0.0	chr11	102474684	102474863	(32611759)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	727991
2539	9.0	0.0	0.3	chr11	102474959	102475258	(32611364)	+	AluSx	SINE/Alu	1	299	(13)	727992
795	20.6	0.8	0.0	chr11	108558257	108558387	(26528235)	C	FLAM_A	SINE/Alu	(10)	132	1	737034
211	36.7	7.3	2.8	chr11	108558505	108558751	(26527871)	C	X6A_LINE	LINE/CR1	(356)	724	466	737035
306	34.7	10.9	4.5	chr11	110000069	110000291	(25086331)	C	AmnSINE1	SINE/5S-Deu-L2	(332)	243	5	739102
13	27.9	2.9	2.9	chr11	110429986	110430053	(24656569)	+	(CCGCCG)n	Simple_repeat	1	70	(0)	739820
17	16.7	2.4	2.3	chr11	117098372	117098413	(17988209)	+	(GCC)n	Simple_repeat	1	43	(0)	750510
16	0.0	7.7	0.0	chr11	117947125	117947150	(17139472)	+	(CACTC)n	Simple_repeat	1	28	(0)	752024
12	13.2	5.7	2.7	chr11	118436244	118436278	(16650344)	+	G-rich	Low_complexity	1	37	(0)	752905
390	26.6	9.1	2.0	chr11	118926283	118926450	(16160172)	+	L2c	LINE/L2	3185	3382	(5)	753870
21	0.0	0.0	0.0	chr11	118926498	118926518	(16160104)	+	(TC)n	Simple_repeat	1	21	(0)	753871
31	0.0	0.0	0.0	chr11	118926519	118926545	(16160077)	+	(CA)n	Simple_repeat	1	27	(0)	753872
14	25.2	3.5	1.7	chr11	119729178	119729235	(15357387)	+	(CGCTCT)n	Simple_repeat	1	60	(0)	755357
2316	12.4	1.3	0.0	chr11	121446469	121446775	(13639847)	+	AluSx	SINE/Alu	1	311	(1)	758131
770	19.1	1.8	0.6	chr11	121590408	121590570	(13496052)	+	MER5A1	DNA/hAT-Charlie	1	165	(1)	758346
6315	13.7	5.9	2.5	chr11	122900989	122901591	(12185031)	C	Tigger3b	DNA/TcMar-Tigger	(0)	1231	572	760434
300	34.2	10.6	1.0	chr11	125375452	125375646	(9710976)	+	MIRb	SINE/MIR	12	227	(41)	764399
201	10.3	0.0	0.0	chr11	126862744	126862772	(8223850)	+	MIR3	SINE/MIR	169	197	(11)	766748
820	27.3	23.9	0.5	chr12	1536776	1536903	(131738406)	+	L2a	LINE/L2	2088	2272	(1147)	780824
1855	18.4	3.5	0.0	chr12	1536904	1537239	(131738070)	+	Tigger3a	DNA/TcMar-Tigger	1	348	(0)	780825
17	17.9	2.7	7.9	chr12	1594790	1594863	(131680446)	+	(GCGCCC)n	Simple_repeat	1	76	(0)	780921
381	23.1	4.2	0.0	chr12	1796021	1796111	(131479198)	C	MER94	DNA/hAT-Blackjack	(22)	112	18	781286
434	27.9	6.9	1.2	chr12	1796360	1796548	(131478761)	C	MIRb	SINE/MIR	(60)	202	4	781282
305	25.6	5.5	1.1	chr12	4829435	4829521	(128445788)	C	MER5A	DNA/hAT-Charlie	(43)	146	56	786145
262	33.5	3.5	8.7	chr12	4829571	4829753	(128445556)	C	MER5B	DNA/hAT-Charlie	(1)	177	5	786146
699	31.3	9.6	5.7	chr12	6626595	6626983	(126648326)	+	L2c	LINE/L2	2938	3343	(44)	789061
694	17.0	0.0	0.0	chr12	6627202	6627307	(126648002)	+	AluSx3	SINE/Alu	192	297	(14)	789062
541	3.2	0.0	0.0	chr12	6943817	6943878	(126331431)	+	U7	snRNA	2	63	(0)	789678
24625	9.9	2.4	2.0	chr12	9636919	9638847	(123636462)	C	MER61-int	LTR/ERV1	(0)	5217	3269	794119
996	21.0	13.5	10.0	chr12	11486292	11486668	(121788641)	C	MER110A	LTR/ERV1	(51)	417	9	796541
16	20.1	0.0	4.1	chr12	12562056	12562104	(120713205)	+	(GCGCCCC)n	Simple_repeat	1	49	(0)	798341
12	12.3	5.1	4.9	chr12	12562720	12562758	(120712551)	+	G-rich	Low_complexity	1	41	(0)	798343
2298	11.3	0.0	0.0	chr12	12704220	12704521	(120570788)	+	AluSz	SINE/Alu	1	302	(10)	798606
498	33.1	0.7	0.0	chr12	13631612	13631747	(119643562)	C	MIRb	SINE/MIR	(127)	141	5	800092
17	20.8	3.4	3.3	chr12	15789446	15789504	(117485805)	+	(CGAG)n	Simple_repeat	1	61	(0)	803291
180	33.7	7.5	8.0	chr12	17991987	17992199	(115283110)	+	MIR	SINE/MIR	45	256	(6)	806099
1764	26.8	9.8	4.6	chr12	24705529	24706202	(108569107)	+	L3	LINE/CR1	1349	2061	(2038)	815272
189	30.9	8.0	0.0	chr12	24839396	24839476	(108435833)	+	L2b	LINE/L2	3238	3325	(50)	815495
715	30.3	9.1	5.7	chr12	25292444	25292866	(107982443)	+	MLT1L	LTR/ERVL-MaLR	1	439	(171)	816275
2641	9.3	0.3	0.0	chr12	25292958	25293311	(107981998)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	816276
6238	8.2	1.4	0.7	chr12	26729093	26729965	(106545344)	+	L1PA13	LINE/L1	5274	6152	(11)	818373
1483	24.9	16.3	2.2	chr12	26884703	26885241	(106390068)	C	LTR41B	LTR/ERVL	(135)	623	1	818645
495	26.9	10.9	6.6	chr12	29103326	29103552	(104171757)	C	MIRb	SINE/MIR	(1)	267	30	821936
312	37.1	8.1	6.4	chr12	29103638	29104195	(104171114)	+	L2c	LINE/L2	2731	3307	(80)	821937
13	20.6	4.9	4.7	chr12	32106869	32106959	(101168350)	+	(GCGAGCC)n	Simple_repeat	1	91	(0)	826843
24	6.6	0.0	0.0	chr12	32139354	32139385	(101135924)	+	(TG)n	Simple_repeat	1	32	(0)	826909
653	28.2	7.2	0.8	chr12	38350699	38350934	(94924375)	C	L2a	LINE/L2	(486)	2933	2682	830991
286	29.9	1.2	0.0	chr12	38350979	38351069	(94924240)	+	L2a	LINE/L2	3284	3426	(0)	830996
5444	12.1	8.5	4.4	chr12	40192376	40193336	(93081973)	C	MER4-int	LTR/ERV1	(5566)	1192	189	833436
345	21.4	18.2	0.0	chr12	42299985	42300096	(90975213)	+	LTR50	LTR/ERVL	1	137	(658)	836382
24	24.1	0.0	1.7	chr12	42300127	42300186	(90975123)	+	(TG)n	Simple_repeat	1	60	(0)	836383
23	19.9	4.1	2.6	chr12	42300187	42300197	(90975112)	+	(TCTGTG)n	Simple_repeat	3	76	(0)	836384
13	18.9	0.0	0.0	chr12	42589114	42589143	(90686166)	+	(CCTCG)n	Simple_repeat	1	30	(0)	836900
284	33.2	3.5	10.9	chr12	43278245	43278555	(89996754)	C	L2c	LINE/L2	(6)	3381	3095	837858
16445	10.2	1.6	0.7	chr12	43702666	43705267	(89570042)	+	HUERS-P3b-int	LTR/ERV1	4713	7411	(7)	838408
14	18.5	4.8	6.2	chr12	43835973	43836034	(89439275)	+	(GCG)n	Simple_repeat	1	65	(0)	838634
13	0.0	5.0	0.0	chr12	45727547	45727566	(87547743)	+	(GGC)n	Simple_repeat	1	21	(0)	841277
4527	21.8	5.9	2.9	chr12	46179159	46180398	(87094911)	+	LTR37-int	LTR/ERV1	2782	4060	(0)	841944
987	19.7	3.4	9.1	chr12	46180482	46180639	(87094670)	+	LTR37A	LTR/ERV1	54	196	(230)	841944
2403	5.2	1.0	2.6	chr12	48717145	48717452	(84557857)	+	AluSx3	SINE/Alu	1	303	(8)	845624
14	24.8	3.0	4.3	chr12	49234624	49234690	(84040619)	+	(GCCGCC)n	Simple_repeat	1	69	(0)	846738
17	16.3	6.8	3.2	chr12	49707425	49707483	(83567826)	+	(CCGCG)n	Simple_repeat	1	63	(0)	847645
13	29.6	0.0	3.5	chr12	49707465	49707521	(83567788)	+	(CCCT)n	Simple_repeat	1	57	(0)	847646
12	12.0	0.0	6.5	chr12	51323953	51323983	(81951326)	+	(GCTCG)n	Simple_repeat	1	31	(0)	851127
241	33.0	5.9	0.0	chr12	53079716	53079827	(80195482)	C	MIRb	SINE/MIR	(15)	253	135	854016
23	20.4	0.0	0.0	chr12	53751052	53751096	(79524213)	+	(AC)n	Simple_repeat	1	45	(0)	855388
15	22.1	3.2	4.6	chr12	53751635	53751697	(79523612)	+	G-rich	Low_complexity	1	65	(0)	855389
15	13.5	3.0	0.0	chr12	54082149	54082181	(79193128)	+	A-rich	Low_complexity	1	34	(0)	855837
606	5.6	0.0	0.0	chr12	56190369	56190439	(77084870)	+	tRNA-Ser-TCG	tRNA	6	76	(9)	859050
2265	10.3	0.7	0.0	chr12	56190451	56190742	(77084567)	C	AluSx	SINE/Alu	(0)	312	19	859051
12	16.3	2.8	2.7	chr12	56224440	56224475	(77050834)	+	G-rich	Low_complexity	1	37	(0)	859122
24	23.2	4.9	1.2	chr12	56258303	56258384	(77016925)	+	(CGG)n	Simple_repeat	1	86	(0)	859169
391	29.1	12.8	4.5	chr12	56468164	56468352	(76806957)	C	MIRb	SINE/MIR	(58)	204	1	859601
31	3.1	0.0	0.0	chr12	64404467	64404499	(68870810)	+	(GCG)n	Simple_repeat	1	33	(0)	871076
23	18.1	0.0	0.0	chr12	64404541	64404586	(68870723)	+	(CCTG)n	Simple_repeat	1	46	(0)	871077
307	35.7	5.5	1.2	chr12	68374507	68374679	(64900630)	C	LTR88a	LTR/Gypsy?	(0)	816	636	877263
19	19.8	0.0	6.7	chr12	69239578	69239637	(64035672)	+	(GCG)n	Simple_repeat	1	60	(0)	878960
18	10.0	6.2	0.0	chr12	80703260	80703291	(52572018)	+	(TC)n	Simple_repeat	1	34	(0)	895362
18	15.4	4.6	5.9	chr12	80703292	80703319	(52571990)	+	(TCTCTTC)n	Simple_repeat	6	68	(0)	895363
11	15.0	4.9	4.7	chr12	89709930	89709970	(43565339)	+	G-rich	Low_complexity	1	43	(0)	907478
195	33.9	0.0	1.6	chr12	92497076	92497138	(40778171)	+	L2b	LINE/L2	3314	3375	(0)	911643
347	31.7	1.4	6.0	chr12	92544359	92544479	(40730830)	+	MIR3	SINE/MIR	38	159	(49)	911725
867	19.2	9.4	1.5	chr12	92544480	92544685	(40730624)	+	MER58A	DNA/hAT-Charlie	1	224	(0)	911726
256	31.6	3.4	6.6	chr12	92546206	92546327	(40728982)	+	MER5B	DNA/hAT-Charlie	46	163	(15)	911733
189	41.8	0.0	0.0	chr12	92546435	92546513	(40728796)	+	L2b	LINE/L2	3292	3370	(5)	911734
714	35.1	9.3	3.8	chr12	92557055	92557684	(40717625)	C	L2	LINE/L2	(913)	2506	1839	911748
1169	10.8	3.0	0.2	chr12	92650348	92650562	(40624747)	+	L1MA4A	LINE/L1	6012	6234	(69)	911904
221	6.9	0.0	0.0	chr12	93669331	93669359	(39605950)	C	L2b	LINE/L2	(14)	3361	3333	913933
578	29.7	6.8	0.2	chr12	94262803	94263023	(39012286)	C	MIRb	SINE/MIR	(0)	268	23	914947
180	22.0	3.8	5.7	chr12	95003876	95003928	(38271381)	+	Penelope1_Vert	LINE/Penelope	880	931	(156)	916302
645	1.3	0.0	0.0	chr12	96036021	96036095	(37239214)	+	tRNA-Asp-GAY	tRNA	1	75	(0)	918300
1074	29.1	4.6	7.0	chr12	96550615	96550984	(36724325)	+	L1MEd	LINE/L1	20	400	(6703)	919331
649	2.8	0.0	0.0	chr12	98503503	98503574	(34771735)	+	tRNA-Asp-GAY	tRNA	1	72	(3)	922374
645	2.8	0.0	0.0	chr12	98504252	98504323	(34770986)	+	tRNA-Trp-TGG	tRNA	1	72	(3)	922375
14	25.4	0.0	6.3	chr12	98516105	98516167	(34759142)	+	G-rich	Low_complexity	1	63	(0)	922401
2259	7.6	0.0	0.4	chr12	98643813	98644075	(34631234)	C	AluSx1	SINE/Alu	(9)	303	42	922686
14	20.4	3.9	7.4	chr12	101697808	101697885	(31577424)	+	(CCAGGCG)n	Simple_repeat	1	81	(0)	927780
26	16.3	3.5	6.7	chr12	101830884	101830970	(31444339)	+	(CGG)n	Simple_repeat	1	90	(0)	928029
15	14.8	1.9	7.5	chr12	101877701	101877752	(31397557)	+	(GCGCCCG)n	Simple_repeat	1	53	(0)	928161
13	5.2	0.0	0.0	chr12	101877768	101877787	(31397522)	+	(CGG)n	Simple_repeat	1	20	(0)	928162
16	19.2	3.4	4.9	chr12	102958341	102958373	(30316936)	+	(GCCGCA)n	Simple_repeat	1	33	(0)	929898
42	1.8	7.0	0.0	chr12	102958374	102958430	(30316879)	+	(GCA)n	Simple_repeat	1	61	(0)	929899
16	19.2	3.4	4.9	chr12	102958431	102958455	(30316854)	+	(GCCGCA)n	Simple_repeat	4	28	(0)	929900
34	24.0	3.4	5.2	chr12	103841045	103841158	(29434151)	+	(CCG)n	Simple_repeat	1	161	(0)	931388
16	22.2	3.9	1.9	chr12	103841159	103841209	(29434100)	+	(CTG)n	Simple_repeat	1	53	(0)	931389
189	16.1	0.0	0.0	chr12	104456707	104456737	(28818572)	C	MER131	DNA?	(150)	65	35	932617
31	11.0	2.0	0.0	chr12	104671729	104671777	(28603532)	+	(TC)n	Simple_repeat	1	50	(0)	933063
18	17.9	0.0	4.2	chr12	108731549	108731596	(24543713)	+	(CCGCCC)n	Simple_repeat	1	48	(0)	940859
365	30.1	8.8	4.9	chr12	108772446	108772630	(24502679)	+	MIRb	SINE/MIR	7	199	(69)	940975
16	17.1	0.0	0.0	chr12	109052622	109052654	(24222655)	+	(CGG)n	Simple_repeat	1	33	(0)	941640
1278	14.3	1.8	0.5	chr12	109899799	109900015	(23375294)	C	AluJr	SINE/Alu	(12)	300	81	943608
211	16.2	0.0	0.0	chr12	109900017	109900053	(23375256)	C	MER5B	DNA/hAT-Charlie	(141)	37	1	943607
17	4.9	0.0	0.0	chr12	110577909	110577929	(22697380)	+	(AC)n	Simple_repeat	1	21	(0)	945038
420	28.9	3.1	7.8	chr12	110578008	110578213	(22697096)	+	MIR3	SINE/MIR	8	203	(5)	945039
2414	9.9	0.0	0.0	chr12	112075881	112076182	(21199127)	C	AluSq2	SINE/Alu	(11)	302	1	948415
17	13.5	0.0	8.3	chr12	112108584	112108631	(21166678)	+	(GCCC)n	Simple_repeat	1	48	(0)	948493
181	26.9	8.2	4.9	chr12	112907400	112907481	(20367828)	+	MER5A	DNA/hAT-Charlie	105	189	(0)	950371
347	25.0	0.0	0.0	chr12	112907611	112907678	(20367631)	+	MIR	SINE/MIR	71	138	(124)	950372
805	27.1	18.6	1.5	chr12	113208514	113208903	(20066406)	C	LTR33A_	LTR/ERVL	(59)	472	1	951064
13	23.3	0.0	2.4	chr12	113221664	113221705	(20053604)	+	G-rich	Low_complexity	1	42	(0)	951099
2094	9.3	0.7	1.0	chr12	113229501	113229791	(20045518)	C	AluSz	SINE/Alu	(22)	290	1	951119
236	39.0	1.9	4.2	chr12	113229794	113229959	(20045350)	+	L2c	LINE/L2	2794	2955	(464)	951120
582	27.3	5.6	3.9	chr12	116538205	116538433	(16736876)	C	MLT1K	LTR/ERVL-MaLR	(0)	595	363	958321
19	14.8	3.5	5.0	chr12	116737904	116737961	(16537348)	+	(GGCGCGG)n	Simple_repeat	1	60	(0)	958801
15	32.4	1.1	3.3	chr12	116819327	116819415	(16455894)	+	(GGCCCGG)n	Simple_repeat	1	90	(0)	959020
1323	1.4	0.0	0.0	chr12	120291760	120291903	(12983406)	C	U4	snRNA	(1)	144	1	966631
1329	1.4	0.0	0.0	chr12	120293094	120293237	(12982072)	C	U4	snRNA	(1)	144	1	966634
25	18.9	4.3	5.2	chr12	120469569	120469661	(12805648)	+	(CCG)n	Simple_repeat	1	97	(0)	967152
23	11.1	6.1	0.0	chr12	120534216	120534264	(12741045)	+	A-rich	Low_complexity	1	52	(0)	967327
18	16.8	2.5	0.0	chr12	120687327	120687366	(12587943)	+	(GCT)n	Simple_repeat	1	41	(0)	967692
15	18.9	6.2	0.0	chr12	120687385	120687432	(12587877)	+	(GGCGC)n	Simple_repeat	1	51	(0)	967693
238	34.4	8.2	7.1	chr12	120688273	120688441	(12586868)	+	MER5A	DNA/hAT-Charlie	1	171	(18)	967694
293	29.3	11.3	5.4	chr12	120688299	120688464	(12586845)	C	MER5A	DNA/hAT-Charlie	(6)	183	7	967695
13	30.7	0.0	0.0	chr12	120710495	120710542	(12564767)	+	G-rich	Low_complexity	1	48	(0)	967732
13	26.2	1.7	3.4	chr12	121626548	121626605	(11648704)	+	G-rich	Low_complexity	1	59	(0)	969869
18	13.5	0.0	0.0	chr12	123364774	123364806	(9910503)	+	(GCG)n	Simple_repeat	1	33	(0)	973884
12	20.0	0.0	0.0	chr12	123364841	123364869	(9910440)	+	(CGCCC)n	Simple_repeat	1	29	(0)	973885
19	20.3	4.1	4.0	chr12	124567489	124567561	(8707748)	+	(GCGCGGA)n	Simple_repeat	1	76	(0)	976292
1114	25.3	12.1	1.4	chr12	124774270	124774622	(8500687)	+	Charlie2b	DNA/hAT-Charlie	1793	2188	(594)	976806
1792	25.0	7.4	8.3	chr12	124774624	124774882	(8500427)	+	L1ME1	LINE/L1	5428	5718	(461)	976807
615	5.6	0.0	0.0	chr12	124921755	124921826	(8353483)	C	tRNA-Ala-GCG	tRNA	(3)	72	1	977152
659	0.0	0.0	0.0	chr12	124927345	124927416	(8347893)	C	tRNA-Asp-GAY	tRNA	(3)	72	1	977165
679	1.4	0.0	0.0	chr12	124927842	124927915	(8347394)	C	tRNA-Phe-TTY	tRNA	(2)	74	1	977166
296	28.9	8.1	0.0	chr12	128820264	128820376	(4454933)	+	MIR	SINE/MIR	36	162	(106)	983916
605	21.1	2.3	15.9	chr12	128820514	128820777	(4454532)	+	MIRb	SINE/MIR	9	254	(14)	983917
237	26.1	0.0	0.0	chr12	128830002	128830070	(4445239)	C	MLT1M	LTR/ERVL-MaLR	(227)	445	377	983941
325	28.0	7.1	0.0	chr12	128830181	128830298	(4445011)	C	MLT1M	LTR/ERVL-MaLR	(352)	320	194	983941
2093	13.9	0.0	0.3	chr12	130880717	130881017	(2394292)	C	AluJb	SINE/Alu	(6)	306	7	987394
24	12.7	0.0	0.0	chr12	131894687	131894748	(1380561)	+	(AGTCGG)n	Simple_repeat	1	62	(0)	988784
2234	9.8	0.7	0.0	chr12	132769954	132770250	(505059)	+	AluSx1	SINE/Alu	2	300	(12)	989922
632	17.8	10.6	0.0	chr12	132888328	132888445	(386864)	+	FLAM_C	SINE/Alu	1	132	(11)	990112
19	11.0	2.4	2.4	chr13	19863432	19863472	(94500856)	+	(CTCCGC)n	Simple_repeat	1	42	(0)	993246
13	11.8	7.7	2.4	chr13	21458926	21458964	(92905364)	+	(GCGTCCG)n	Simple_repeat	1	42	(0)	996140
19	0.0	0.0	0.0	chr13	27620497	27620520	(86743808)	+	(CGC)n	Simple_repeat	1	24	(0)	1005251
17	4.3	0.0	0.0	chr13	27917607	27917630	(86446698)	+	(TAA)n	Simple_repeat	1	24	(0)	1005746
385	30.6	4.8	0.7	chr13	28049025	28049175	(86315153)	C	L2c	LINE/L2	(12)	3414	3220	1005991
14	18.4	2.7	0.0	chr13	28139237	28139273	(86225055)	+	(CCTCCTT)n	Simple_repeat	1	38	(0)	1006221
426	31.7	11.0	1.6	chr13	28658712	28658900	(85705428)	+	MIRc	SINE/MIR	58	266	(2)	1007119
18	27.4	1.3	4.0	chr13	30464650	30464724	(83899604)	+	(CCG)n	Simple_repeat	1	76	(0)	1009735
3095	17.5	5.1	1.3	chr13	30662675	30662918	(83701410)	C	Tigger17a	DNA/TcMar-Tigger	(406)	248	5	1010154
2349	7.2	0.0	6.3	chr13	30662919	30663236	(83701092)	C	AluSq2	SINE/Alu	(15)	298	1	1010156
666	0.0	0.0	0.0	chr13	30673964	30674037	(83690291)	C	tRNA-Asn-AAC	tRNA	(3)	74	1	1010174
225	28.6	9.5	3.6	chr13	30720498	30720635	(83643693)	C	Eulor9A	DNA	(22)	279	133	1010257
479	30.0	1.7	5.6	chr13	30797336	30797515	(83566813)	C	MIRb	SINE/MIR	(50)	218	46	1010397
210	39.8	10.1	1.2	chr13	33144207	33144458	(81219870)	+	L2	LINE/L2	2473	2749	(670)	1013885
5084	21.9	3.9	1.6	chr13	33146626	33147707	(81216621)	+	L1MC1	LINE/L1	1	1108	(6409)	1013889
448	26.8	11.0	0.0	chr13	39306647	39306784	(75057544)	C	MIRc	SINE/MIR	(2)	266	112	1022449
15	4.7	0.0	0.0	chr13	40666509	40666530	(73697798)	+	(CGGA)n	Simple_repeat	1	22	(0)	1024471
14	20.6	2.1	4.1	chr13	40666565	40666612	(73697716)	+	(GCT)n	Simple_repeat	1	49	(0)	1024472
17	18.1	3.1	6.1	chr13	40666644	40666707	(73697621)	+	(CCGC)n	Simple_repeat	1	66	(0)	1024473
346	21.9	0.0	0.0	chr13	41060737	41060809	(73303519)	C	tRNA-Glu-GAG_	tRNA	(2)	73	1	1025161
13	10.4	6.2	0.0	chr13	41060893	41060914	(73303414)	+	(CTG)n	Simple_repeat	1	24	(0)	1025162
35	0.0	0.0	0.0	chr13	41060915	41060946	(73303382)	+	(GCC)n	Simple_repeat	1	32	(0)	1025163
12	15.7	2.6	5.0	chr13	41311487	41311525	(73052803)	+	(CCTG)n	Simple_repeat	1	40	(0)	1025640
14	14.2	3.2	0.0	chr13	42549150	42549199	(71815129)	+	(GACA)n	Simple_repeat	1	51	(0)	1027526
326	20.6	0.0	0.0	chr13	44917926	44917998	(69446330)	C	tRNA-Glu-GAG_	tRNA	(2)	73	1	1031204
27	16.1	0.0	3.4	chr13	48303940	48303998	(66060330)	+	(GCC)n	Simple_repeat	1	59	(0)	1036634
359	27.3	2.3	0.0	chr13	49847812	49847935	(64516393)	+	MIRb	SINE/MIR	35	163	(67)	1039174
75	15.5	4.7	4.1	chr13	49996819	49997027	(64367301)	+	G-rich	Low_complexity	1	210	(0)	1039473
668	17.5	12.2	5.1	chr13	50912262	50912436	(63451892)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	1040829
14	28.3	0.0	5.6	chr13	51452898	51452968	(62911360)	+	(GGAGTGG)n	Simple_repeat	1	71	(0)	1041603
558	32.4	5.5	3.1	chr13	51824972	51825296	(62539032)	C	Tigger15a	DNA/TcMar-Tigger	(71)	644	309	1042154
959	14.0	1.3	0.0	chr13	51825358	51825507	(62538821)	C	L1MB5	LINE/L1	(13)	6161	6010	1042156
657	18.8	4.3	10.6	chr13	52447182	52447407	(61916921)	C	L1ME4a	LINE/L1	(340)	5784	5574	1043122
341	23.8	4.1	9.4	chr13	52447583	52447717	(61916611)	+	MIRb	SINE/MIR	4	140	(90)	1043124
502	23.0	9.5	10.1	chr13	52903304	52903472	(61460856)	C	MIR	SINE/MIR	(90)	172	5	1043871
266	28.1	6.7	6.7	chr13	52903535	52903644	(61460684)	+	L2c	LINE/L2	3265	3375	(12)	1043870
343	31.6	12.2	3.1	chr13	58955995	58956187	(55408141)	+	MamTip2	DNA/hAT-Tip100	25	237	(68)	1051403
13	13.1	2.7	5.3	chr13	59734500	59734536	(54629792)	+	(GTCAT)n	Simple_repeat	1	38	(0)	1052502
21482	10.7	4.8	2.3	chr13	68257765	68261389	(46102939)	+	MER61-int	LTR/ERV1	1411	5206	(11)	1063312
35	5.4	0.0	0.0	chr13	75480868	75480906	(38883422)	+	(CA)n	Simple_repeat	1	39	(0)	1073408
2237	13.2	3.6	1.4	chr13	77429552	77429906	(36934422)	C	THE1B	LTR/ERVL-MaLR	(0)	364	2	1076196
17	22.7	1.9	1.9	chr13	77697597	77697649	(36666679)	+	(CCGCC)n	Simple_repeat	1	54	(0)	1076567
320	31.7	14.6	2.4	chr13	77730058	77730267	(36634061)	C	L2b	LINE/L2	(363)	3056	2817	1076598
1980	17.5	0.0	1.1	chr13	79468845	79469214	(34895114)	+	L1MB3	LINE/L1	5814	6179	(4)	1078990
945	18.2	4.0	0.0	chr13	79660496	79660687	(34703641)	+	L1MB7	LINE/L1	5955	6154	(30)	1079271
376	36.4	6.5	2.3	chr13	87554120	87554296	(26810032)	+	MamRTE1	LINE/RTE-BovB	3113	3297	(515)	1089150
14	27.5	1.7	3.3	chr13	91348957	91349016	(23015312)	+	(CGC)n	Simple_repeat	1	61	(0)	1094137
661	1.4	0.0	0.0	chr13	94549650	94549722	(19814606)	C	tRNA-Phe-TTY	tRNA	(3)	73	1	1098498
13	16.2	2.0	8.0	chr13	97976865	97976913	(16387415)	+	(CGGC)n	Simple_repeat	1	50	(0)	1103823
39	16.9	2.7	8.5	chr13	106567412	106567560	(7796768)	+	(CCCGC)n	Simple_repeat	1	153	(0)	1116230
13	22.9	2.3	2.3	chr13	106567593	106567635	(7796693)	+	(CTC)n	Simple_repeat	1	44	(0)	1116231
542	32.5	10.9	3.6	chr13	108575185	108575660	(5788668)	C	LTR78	LTR/ERV1	(648)	656	142	1118976
2425	23.9	1.9	2.9	chr13	110459114	110459765	(3904563)	+	L1MB7	LINE/L1	5538	6182	(2)	1121273
17	18.8	5.4	1.7	chr13	110705974	110706029	(3658299)	+	(CCGCCCG)n	Simple_repeat	1	59	(0)	1121626
17	14.6	4.1	3.9	chr13	110706167	110706215	(3658113)	+	(CACGCC)n	Simple_repeat	1	51	(0)	1121627
27	3.4	0.0	0.0	chr13	112689836	112689865	(1674463)	+	(CCTCTGC)n	Simple_repeat	1	30	(0)	1123837
34	14.9	6.5	2.0	chr13	112689876	112689968	(1674360)	+	G-rich	Low_complexity	1	99	(0)	1123838
26	25.2	4.8	3.1	chr13	113297341	113297347	(1066981)	+	(GCGCCCC)n	Simple_repeat	1	15	(115)	1124475
12	29.0	2.8	4.0	chr13	113297348	113297419	(1066909)	+	(CGCAC)n	Simple_repeat	1	74	(0)	1124476
12	27.6	6.2	0.0	chr13	114314573	114314637	(49691)	+	(GCCGCCC)n	Simple_repeat	1	69	(0)	1125515
29	33.2	0.0	3.6	chr14	20461318	20461457	(86582261)	+	(GCCGCC)n	Simple_repeat	1	140	(0)	1128082
643	0.0	0.0	0.0	chr14	20609336	20609407	(86434311)	C	tRNA-Pro-CCY	tRNA	(3)	72	1	1128336
722	0.0	0.0	0.0	chr14	20610132	20610213	(86433505)	+	tRNA-Leu-CTY	tRNA	1	82	(3)	1128337
657	1.4	0.0	0.0	chr14	20613399	20613472	(86430246)	C	tRNA-Pro-CCY	tRNA	(1)	74	1	1128342
740	0.0	0.0	0.0	chr14	20625370	20625451	(86418267)	+	tRNA-Leu-CTA_	tRNA	1	82	(3)	1128366
267	10.2	0.0	24.4	chr14	20630432	20630509	(86413209)	C	tRNA-Tyr-TAC	tRNA	(15)	61	3	1128375
686	0.0	0.0	0.0	chr14	20631159	20631232	(86412486)	C	tRNA-Thr-ACA	tRNA	(2)	74	1	1128376
635	1.4	0.0	0.0	chr14	20633006	20633078	(86410640)	+	tRNA-Pro-CCA	tRNA	1	73	(2)	1128377
11	10.0	5.7	2.7	chr14	20633079	20633108	(86410610)	+	(TTCTCT)n	Simple_repeat	5	35	(0)	1128378
544	0.0	0.0	22.3	chr14	20663192	20663285	(86380433)	C	tRNA-Tyr-TAC	tRNA	(3)	73	1	1128422
638	2.7	0.0	0.0	chr14	20681690	20681762	(86361956)	+	tRNA-Thr-ACA	tRNA	1	73	(3)	1128457
563	0.0	0.0	18.0	chr14	20683273	20683361	(86360357)	+	tRNA-Tyr-TAC	tRNA	1	73	(3)	1128459
644	1.4	0.0	0.0	chr14	20684016	20684089	(86359629)	+	tRNA-Pro-CCA	tRNA	1	74	(1)	1128460
25	22.4	2.5	2.4	chr14	21092542	21092622	(85951096)	+	(GGCTGA)n	Simple_repeat	1	83	(0)	1129071
23	17.2	1.9	0.0	chr14	21092584	21092635	(85951083)	+	(GGCGGA)n	Simple_repeat	1	53	(0)	1129072
182	24.5	2.0	0.0	chr14	22872886	22872934	(84170784)	C	MIRc	SINE/MIR	(102)	166	117	1131880
663	1.4	0.0	0.0	chr14	22929701	22929773	(84113945)	+	tRNA-Arg-CGY_	tRNA	1	73	(3)	1131978
205	21.9	1.5	9.9	chr14	31208260	31208330	(75835388)	C	MIRb	SINE/MIR	(82)	186	122	1143147
983	0.0	0.0	0.0	chr14	32203164	32203269	(74840449)	C	U6	snRNA	(1)	106	1	1144828
344	21.4	4.5	0.0	chr14	32206273	32206356	(74837362)	C	MER5B	DNA/hAT-Charlie	(4)	174	87	1144834
19	11.1	3.6	6.9	chr14	34630043	34630098	(72413620)	+	(CCCGCG)n	Simple_repeat	1	58	(0)	1148281
17	14.3	4.0	3.9	chr14	35404653	35404702	(71639016)	+	G-rich	Low_complexity	1	52	(0)	1149965
229	28.3	2.9	5.7	chr14	35856264	35856368	(71187350)	C	MIR	SINE/MIR	(11)	251	150	1150751
468	31.3	5.2	1.1	chr14	45251988	45252171	(61791547)	C	MIR	SINE/MIR	(56)	206	15	1162922
298	24.9	14.4	1.1	chr14	45252199	45252487	(61791231)	+	L1ME3G	LINE/L1	432	633	(291)	1162923
2827	1.0	0.0	0.0	chr14	49586580	49586879	(57456839)	+	7SLRNA	srpRNA	1	300	(20)	1168209
1938	10.2	1.0	11.1	chr14	49886482	49886824	(57156894)	+	AluSz6	SINE/Alu	1	308	(4)	1168841
363	27.3	7.0	9.8	chr14	50062887	50062903	(56980815)	+	L1M5	LINE/L1	4232	4251	(1895)	1169194
1657	18.3	4.6	0.3	chr14	50062904	50063192	(56980526)	+	AluJb	SINE/Alu	1	302	(10)	1169195
24	26.0	0.0	5.5	chr14	50532503	50532593	(56511125)	+	(GCC)n	Simple_repeat	1	91	(0)	1170125
15	22.0	2.0	2.0	chr14	52695751	52695799	(54347919)	+	(CCCCG)n	Simple_repeat	1	50	(0)	1173340
14	24.7	0.0	0.0	chr14	52791516	52791554	(54252164)	+	(CACCGC)n	Simple_repeat	1	39	(0)	1173517
19	18.2	7.5	3.5	chr14	58200077	58200156	(48843562)	+	(CCGCGG)n	Simple_repeat	1	86	(0)	1181806
19	18.0	10.9	2.0	chr14	58200157	58200165	(48843553)	+	(AGCGCCG)n	Simple_repeat	4	102	(0)	1181807
615	2.7	0.0	0.0	chr14	58239894	58239967	(48803751)	C	tRNA-Lys-AAG	tRNA	(2)	74	1	1181896
313	27.9	4.9	1.4	chr14	58395685	58395822	(48647896)	+	MIRb	SINE/MIR	1	143	(125)	1182162
3576	22.1	4.7	2.4	chr14	61325005	61326605	(45717113)	+	L1ME1	LINE/L1	4522	6168	(11)	1186355
2305	12.6	0.0	0.0	chr14	61387867	61388176	(45655542)	+	AluSx	SINE/Alu	2	311	(1)	1186443
605	22.8	5.1	7.0	chr14	61388177	61388252	(45655466)	C	MER112	DNA/hAT-Charlie	(191)	70	1	1186442
1103	14.4	6.5	0.5	chr14	64444972	64445174	(42598544)	+	MER20	DNA/hAT-Charlie	4	219	(0)	1191313
43	0.0	0.0	0.0	chr14	65205597	65205633	(41838085)	+	(GT)n	Simple_repeat	1	37	(0)	1192647
1946	18.3	0.6	0.6	chr14	65301902	65302341	(41741377)	+	MER89	LTR/ERV1	2	539	(20)	1192867
2053	14.5	4.6	0.0	chr14	67880895	67881226	(39162492)	C	Tigger3a	DNA/TcMar-Tigger	(0)	348	1	1196868
1929	27.8	6.6	2.5	chr14	67881227	67881770	(39161948)	C	L1MEc	LINE/L1	(5742)	658	94	1196860
55	0.0	0.0	0.0	chr14	68275795	68275841	(38767877)	+	(CA)n	Simple_repeat	1	47	(0)	1197471
1630	23.1	8.3	3.1	chr14	68663336	68663655	(38380063)	+	LTR33	LTR/ERVL	171	514	(1)	1198048
467	32.9	6.5	2.8	chr14	68663730	68663979	(38379739)	+	MIR	SINE/MIR	3	262	(0)	1198051
656	18.2	15.9	6.5	chr14	68817043	68817212	(38226506)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	1198300
194	18.8	0.0	0.0	chr14	68821406	68821437	(38222281)	C	L2b	LINE/L2	(14)	3361	3330	1198311
21	16.4	3.5	3.3	chr14	69152986	69153043	(37890675)	+	(CCG)n	Simple_repeat	1	60	(0)	1198957
326	33.7	6.0	5.1	chr14	69625249	69625490	(37418228)	C	MIR1_Amn	SINE/MIR	(18)	244	24	1199910
2412	13.4	0.5	4.1	chr14	70654670	70655082	(36388636)	C	MER57B1	LTR/ERV1	(3)	398	1	1201489
389	24.0	3.9	6.6	chr14	70655083	70655113	(36388605)	C	L1ME4b	LINE/L1	(47)	6077	6047	1201488
2336	9.8	0.0	1.9	chr14	70655114	70655429	(36388289)	+	AluSx	SINE/Alu	3	312	(0)	1201490
23	21.1	1.3	5.1	chr14	70907480	70907557	(36136161)	+	(GGCGGC)n	Simple_repeat	1	79	(0)	1201960
30	16.4	4.5	4.3	chr14	70907604	70907692	(36136026)	+	(CTC)n	Simple_repeat	1	93	(0)	1201961
4723	9.4	1.1	0.6	chr14	71130673	71131303	(35912415)	+	MER41B	LTR/ERV1	1	634	(0)	1202243
16	24.8	0.0	3.6	chr14	71321008	71321016	(35722702)	+	(GCCGCTC)n	Simple_repeat	1	51	(0)	1202621
16	7.6	11.9	0.0	chr14	71321017	71321058	(35722660)	+	(CGCTCGG)n	Simple_repeat	1	47	(0)	1202622
217	28.1	0.0	1.5	chr14	72155371	72155435	(34888283)	C	L3	LINE/CR1	(2)	4097	4034	1203872
1419	10.1	0.0	2.5	chr14	73465378	73465576	(33578142)	+	AluSp	SINE/Alu	120	313	(0)	1206329
19	3.9	0.0	0.0	chr14	73714419	73714445	(33329273)	+	(CCGCC)n	Simple_repeat	1	27	(0)	1206931
611	23.4	1.9	2.5	chr14	73770671	73770855	(33272863)	+	Tigger16a	DNA/TcMar-Tigger	793	950	(7)	1207033
19	20.1	1.9	1.9	chr14	74612690	74612747	(32430971)	+	G-rich	Low_complexity	1	58	(0)	1208836
16	45.4	0.0	0.0	chr14	75231293	75231372	(31812346)	+	(TG)n	Simple_repeat	1	80	(0)	1210017
504	27.5	6.6	5.1	chr14	76960864	76961041	(30082677)	+	MER112	DNA/hAT-Charlie	70	261	(0)	1213301
2956	14.5	9.5	3.0	chr14	87995286	87995881	(19047837)	C	MER61F	LTR/ERV1	(37)	639	1	1229797
409	26.0	17.4	1.0	chr14	88006258	88006459	(19037259)	C	MIR	SINE/MIR	(19)	243	2	1229815
19	18.9	8.6	1.3	chr14	90397079	90397148	(16646570)	+	(GCA)n	Simple_repeat	1	76	(0)	1233834
405	32.4	12.3	4.1	chr14	91154702	91155282	(15888436)	+	L2c	LINE/L2	2730	3354	(33)	1235179
247	31.2	0.0	3.1	chr14	91155295	91155390	(15888328)	C	MIR	SINE/MIR	(10)	252	160	1235184
12	13.3	5.7	2.7	chr14	91509766	91509800	(15533918)	+	(GCC)n	Simple_repeat	1	37	(0)	1235827
18	28.3	1.0	5.9	chr14	91510623	91510722	(15532996)	+	(CGGCCC)n	Simple_repeat	1	101	(0)	1235829
12	5.6	0.0	0.0	chr14	92577514	92577532	(14466186)	+	(GCA)n	Simple_repeat	1	19	(0)	1237816
634	24.4	5.5	0.6	chr14	92582921	92583077	(14460641)	+	MIR	SINE/MIR	7	171	(91)	1237827
371	25.5	13.0	0.0	chr14	92651088	92651228	(14392490)	C	MIR	SINE/MIR	(92)	170	9	1237943
15	17.2	0.0	6.7	chr14	92677258	92677302	(14366416)	+	(CCCA)n	Simple_repeat	1	45	(0)	1238005
200	33.3	5.1	6.2	chr14	92677353	92677512	(14366206)	C	X7C_LINE	LINE/CR1	(0)	236	79	1238006
267	30.8	10.7	3.0	chr14	93946152	93946302	(13097416)	+	MIRc	SINE/MIR	36	203	(65)	1240340
404	30.6	4.8	3.0	chr14	93967507	93967671	(13076047)	+	MIR3	SINE/MIR	20	187	(21)	1240381
516	28.4	3.0	1.9	chr14	93967805	93968019	(13075699)	+	MIR3	SINE/MIR	12	239	(29)	1240382
577	21.5	5.6	1.5	chr14	93978119	93978255	(13065463)	+	MLT1H1	LTR/ERVL-MaLR	36	178	(377)	1240398
421	25.8	11.6	1.3	chr14	93978309	93978500	(13065218)	+	MLT1H1	LTR/ERVL-MaLR	375	588	(7)	1240398
405	35.4	4.2	1.6	chr14	94011963	94012146	(13031572)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	1240460
127	20.2	0.7	3.0	chr14	94012159	94012453	(13031265)	+	(TCCCT)n	Simple_repeat	1	297	(0)	1240461
1066	26.4	11.3	4.3	chr14	95328059	95328124	(11715594)	+	L1ME3A	LINE/L1	5606	5663	(510)	1242788
1945	13.2	0.0	1.6	chr14	95328125	95328428	(11715290)	+	AluSz	SINE/Alu	2	300	(12)	1242789
559	32.6	5.0	3.2	chr14	96192931	96193244	(10850474)	+	MLT1N2	LTR/ERVL-MaLR	116	435	(127)	1244417
234	28.8	12.1	1.9	chr14	96194668	96194823	(10848895)	+	L1ME1	LINE/L1	5969	6142	(37)	1244419
51	2.1	0.0	0.0	chr14	97369357	97369404	(9674314)	+	(TG)n	Simple_repeat	1	48	(0)	1246586
13	20.4	4.3	2.0	chr14	99604226	99604272	(7439446)	+	(CCGCCCCG)n	Simple_repeat	1	49	(0)	1250258
298	25.8	7.0	3.2	chr14	100065060	100065183	(6978535)	C	MIRc	SINE/MIR	(128)	140	12	1251121
15	30.4	0.0	0.0	chr14	100376199	100376250	(6667468)	+	(TCCC)n	Simple_repeat	1	52	(0)	1251757
288	31.1	3.2	5.0	chr14	101823599	101823757	(5219961)	C	MIRc	SINE/MIR	(88)	180	25	1253707
44	0.0	0.0	0.0	chr14	101825212	101825249	(5218469)	+	(GT)n	Simple_repeat	1	38	(0)	1253709
12	18.4	5.4	0.0	chr14	102087355	102087391	(4956327)	+	(CCGCCCT)n	Simple_repeat	1	39	(0)	1254195
683	0.0	0.0	0.0	chr14	102317092	102317165	(4726553)	+	tRNA-Ile-ATT	tRNA	1	74	(3)	1254658
22	22.7	0.0	1.7	chr14	102319768	102319825	(4723893)	+	(GGC)n	Simple_repeat	1	58	(0)	1254667
16	8.5	0.0	0.0	chr14	102319917	102319941	(4723777)	+	(CGC)n	Simple_repeat	1	25	(0)	1254668
1582	19.7	1.4	1.2	chr14	102525254	102525597	(4518121)	+	L1MB3	LINE/L1	5698	6042	(141)	1255089
3817	11.5	0.9	1.1	chr14	103427526	103428035	(3615683)	C	MER41B	LTR/ERV1	(129)	505	2	1256813
23	27.9	0.0	2.5	chr14	103715302	103715382	(3328336)	+	(CCCGCC)n	Simple_repeat	1	81	(0)	1257364
225	31.5	6.1	0.9	chr14	105070152	105070260	(1973458)	+	LTR103_Mam	LTR/ERV1?	350	464	(11)	1259201
676	26.4	4.1	3.4	chr14	105070413	105070679	(1973039)	C	MLT1J	LTR/ERVL-MaLR	(202)	310	42	1259202
259	31.5	2.7	0.0	chr14	105087889	105087961	(1955757)	C	MIR	SINE/MIR	(74)	188	114	1259227
14	19.9	6.6	3.1	chr14	105398207	105398267	(1645451)	+	(CGCCC)n	Simple_repeat	1	65	(0)	1259622
21	5.0	7.0	2.2	chr14	105415231	105415273	(1628445)	+	(CGCGGGG)n	Simple_repeat	1	46	(0)	1259656
11	24.8	0.0	0.0	chr14	105474566	105474599	(1569119)	+	G-rich	Low_complexity	1	34	(0)	1259730
370	22.5	7.2	2.3	chr14	106851869	106852000	(191718)	+	MER65B	LTR/ERV1	1	139	(392)	1261128
1735	14.6	4.8	0.7	chr15	30859307	30859603	(71131586)	+	LTR47A2	LTR/ERVL	112	421	(11)	1277766
4076	21.4	3.2	7.7	chr15	30859604	30860654	(71130535)	+	HERVL74-int	LTR/ERVL	3875	4876	(809)	1277761
18	29.9	3.7	2.7	chr15	30904028	30904134	(71087055)	+	(CGCGGC)n	Simple_repeat	1	111	(0)	1277837
22	18.7	1.5	4.5	chr15	34039161	34039226	(67951963)	+	G-rich	Low_complexity	1	67	(0)	1282165
13	17.6	3.3	8.1	chr15	34988252	34988311	(67002878)	+	(GCGGC)n	Simple_repeat	1	62	(0)	1283721
1864	33.8	9.4	6.6	chr15	35136340	35137920	(66853269)	C	L4_A_Mam	LINE/RTE-X	(1330)	3660	2011	1284004
29	28.7	3.3	1.6	chr15	37098981	37099101	(64892088)	+	(GGC)n	Simple_repeat	1	125	(0)	1286504
13	15.0	3.3	0.0	chr15	37099077	37099106	(64892083)	+	(GCA)n	Simple_repeat	1	31	(0)	1286505
15	20.6	0.0	6.0	chr15	38564665	38564714	(63426475)	+	(CGC)n	Simple_repeat	1	50	(0)	1288523
286	24.8	15.1	0.0	chr15	38672739	38672839	(63318350)	C	MIRb	SINE/MIR	(81)	187	69	1288685
21	4.0	0.0	0.0	chr15	39788073	39788098	(62203091)	+	(CA)n	Simple_repeat	1	26	(0)	1290173
2299	11.8	0.0	0.0	chr15	40543445	40543750	(61447439)	C	AluSx4	SINE/Alu	(2)	308	3	1291397
2283	15.4	2.1	11.9	chr15	40543751	40543831	(61447358)	+	LTR47A2	LTR/ERVL	366	432	(0)	1291394
1539	26.6	10.9	3.2	chr15	40543832	40543997	(61447192)	C	L3	LINE/CR1	(470)	3629	3453	1291393
729	1.2	0.0	0.0	chr15	40593825	40593906	(61397283)	C	tRNA-Ser-AGY	tRNA	(3)	82	1	1291509
16	16.4	0.0	0.0	chr15	40874076	40874109	(61117080)	+	G-rich	Low_complexity	1	34	(0)	1292108
14	20.2	0.0	0.0	chr15	41774508	41774541	(60216648)	+	(CTGCCG)n	Simple_repeat	1	34	(0)	1294072
422	29.3	5.0	11.0	chr15	42495112	42495456	(59495733)	+	L2b	LINE/L2	3048	3370	(5)	1295221
12	31.9	0.0	0.0	chr15	43133656	43133702	(58857487)	+	(GGCCCC)n	Simple_repeat	1	47	(0)	1296447
14	23.4	3.4	3.3	chr15	43133895	43133953	(58857236)	+	(GCCCGC)n	Simple_repeat	1	61	(0)	1296448
568	29.6	10.3	8.2	chr15	43225560	43225819	(58765370)	C	L2b	LINE/L2	(40)	3335	3081	1296600
7071	8.4	3.5	2.2	chr15	44784189	44785182	(57206007)	C	LTR13	LTR/ERVK	(0)	1007	1	1299553
8837	14.6	4.8	1.0	chr15	44876800	44877612	(57113577)	C	HUERS-P1-int	LTR/ERV1	(370)	4645	4118	1299694
1988	16.8	0.3	0.0	chr15	44877613	44877921	(57113268)	C	AluJb	SINE/Alu	(2)	310	1	1299695
643	2.8	0.0	0.0	chr15	45198606	45198677	(56792512)	C	tRNA-His-CAY_	tRNA	(3)	72	1	1300216
643	2.8	0.0	0.0	chr15	45200413	45200484	(56790705)	C	tRNA-His-CAY_	tRNA	(3)	72	1	1300219
643	2.8	0.0	0.0	chr15	45201151	45201222	(56789967)	+	tRNA-His-CAY_	tRNA	1	72	(3)	1300220
13	23.7	0.0	4.2	chr15	45279515	45279562	(56711627)	+	GA-rich	Low_complexity	1	48	(0)	1300371
262	25.0	5.6	0.0	chr15	45279640	45279723	(56711466)	C	L1ME3G	LINE/L1	(273)	651	563	1300372
2039	17.3	3.3	0.8	chr15	45399320	45399675	(56591514)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	1300581
553	33.1	3.5	0.0	chr15	50009641	50009885	(51981304)	C	Tigger15a	DNA/TcMar-Tigger	(441)	274	21	1306955
15	6.7	2.9	5.6	chr15	50686809	50686843	(51304346)	+	(GCGGC)n	Simple_repeat	1	36	(0)	1308295
13	20.2	4.3	2.0	chr15	50765626	50765672	(51225517)	+	(CCGGA)n	Simple_repeat	1	49	(0)	1308472
1725	17.6	0.0	5.6	chr15	52220842	52220974	(49770215)	C	AluJb	SINE/Alu	(185)	127	1	1310929
880	22.5	6.9	6.2	chr15	52220975	52221082	(49770107)	+	MER102a	DNA/hAT-Charlie	216	330	(0)	1310928
14	14.8	1.9	9.1	chr15	52568729	52568782	(49422407)	+	(GCCTCG)n	Simple_repeat	1	55	(0)	1311518
379	32.9	7.2	1.2	chr15	55277084	55277332	(46713857)	+	HAL1	LINE/L1	2194	2458	(49)	1315235
734	10.9	0.0	0.0	chr15	55277361	55277452	(46713737)	+	AluSz6	SINE/Alu	1	92	(220)	1315236
705	29.1	3.7	3.4	chr15	55277453	55277719	(46713470)	C	Tigger15a	DNA/TcMar-Tigger	(292)	423	156	1315237
12	24.0	4.5	0.0	chr15	56887288	56887331	(45103858)	+	(GCCGC)n	Simple_repeat	1	46	(0)	1317809
17	11.2	0.0	0.0	chr15	58749538	58749566	(43241623)	+	(CCG)n	Simple_repeat	1	29	(0)	1320716
1263	18.2	3.5	0.9	chr15	59413068	59413415	(42577774)	C	MER74C	LTR/ERVL	(106)	452	11	1322018
254	22.1	2.7	12.6	chr15	60508166	60508272	(41482917)	+	MIR3	SINE/MIR	7	106	(162)	1323917
726	27.0	8.5	2.7	chr15	63474604	63474856	(38516333)	C	MIRb	SINE/MIR	(3)	265	1	1328640
376	32.0	1.3	1.5	chr15	63881611	63881753	(38109436)	+	MIRb	SINE/MIR	17	158	(72)	1329326
2658	18.4	14.1	1.3	chr15	63881849	63882463	(38108726)	C	MER39	LTR/ERV1	(0)	707	1	1329327
69	31.7	1.6	0.4	chr15	63897116	63897361	(38093828)	+	(AC)n	Simple_repeat	1	250	(0)	1329352
320	21.1	5.0	3.1	chr15	64144488	64144585	(37846604)	C	MER102b	DNA/hAT-Charlie	(109)	232	133	1329846
974	0.9	0.0	0.8	chr15	65296051	65296167	(36695022)	+	U5	snRNA	1	116	(0)	1332324
859	6.9	0.0	0.8	chr15	65304677	65304793	(36686396)	+	U5	snRNA	1	116	(0)	1332345
638	4.0	0.0	0.0	chr15	65869059	65869133	(36122056)	C	tRNA-Gln-CAG	tRNA	(0)	75	1	1333537
30	3.0	2.9	0.0	chr15	67102248	67102281	(34888908)	+	(GT)n	Simple_repeat	1	35	(0)	1336079
14	25.1	2.1	0.0	chr15	68229352	68229398	(33761791)	+	(CGCCC)n	Simple_repeat	1	48	(0)	1337960
362	31.8	4.0	10.3	chr15	70162479	70162692	(31828497)	+	MIRb	SINE/MIR	26	225	(43)	1341596
266	28.6	4.8	7.0	chr15	70492524	70492651	(31498538)	C	MIRb	SINE/MIR	(116)	152	28	1342250
19	12.0	2.8	0.0	chr15	74433806	74433841	(27557348)	+	(CAG)n	Simple_repeat	1	37	(0)	1348811
525	25.7	5.3	2.0	chr15	74460877	74461023	(27530166)	C	MIRb	SINE/MIR	(55)	213	62	1348854
16	14.7	0.0	0.0	chr15	74782153	74782207	(27208982)	+	(GCC)n	Simple_repeat	1	55	(0)	1349517
16	11.1	0.0	3.2	chr15	74938170	74938200	(27052989)	+	(GCG)n	Simple_repeat	1	31	(0)	1349817
2233	13.5	0.3	0.0	chr15	75130664	75130974	(26860215)	C	AluSz	SINE/Alu	(0)	312	1	1350248
3733	16.4	1.4	0.3	chr15	75130975	75131655	(26859534)	C	L1MB2	LINE/L1	(32)	6139	5451	1350249
17	6.5	0.0	7.9	chr15	75213330	75213367	(26777822)	+	(CCTC)n	Simple_repeat	1	38	(0)	1350407
13	11.6	3.6	0.0	chr15	75579312	75579339	(26411850)	+	G-rich	Low_complexity	1	29	(0)	1351123
213	29.2	1.1	2.2	chr15	77543593	77543683	(24447506)	C	MIR1_Amn	SINE/MIR	(103)	127	38	1354239
15	25.5	6.0	4.8	chr15	78131221	78131337	(23859852)	+	(CCGCGGC)n	Simple_repeat	1	124	(0)	1355267
16	28.6	1.3	3.9	chr15	78131451	78131527	(23859662)	+	(GGCACCC)n	Simple_repeat	1	78	(0)	1355268
16	22.3	2.0	2.0	chr15	78149437	78149485	(23841704)	+	(GCAG)n	Simple_repeat	1	50	(0)	1355315
620	2.7	0.0	0.0	chr15	78860562	78860634	(23130555)	+	tRNA-Lys-AAG	tRNA	1	73	(3)	1356758
2326	9.0	1.6	0.0	chr15	78939607	78939907	(23051282)	+	AluSx	SINE/Alu	2	307	(5)	1356913
635	26.8	2.4	2.4	chr15	78939923	78940090	(23051099)	C	MER58A	DNA/hAT-Charlie	(8)	216	49	1356914
231	28.9	1.1	6.2	chr15	80211168	80211263	(21779926)	+	L1P4a	LINE/L1	185	275	(6228)	1359181
20	24.8	2.7	2.6	chr15	82810046	82810077	(19181112)	+	(GGCTGG)n	Simple_repeat	1	60	(17)	1363497
13	6.5	5.6	5.3	chr15	82810078	82810113	(19181076)	+	G-rich	Low_complexity	1	38	(0)	1363498
20	24.8	2.7	2.6	chr15	82810114	82810120	(19181069)	+	(GGCTGG)n	Simple_repeat	61	77	(0)	1363497
947	16.2	1.3	12.7	chr15	85840939	85841127	(16150062)	C	L1ME2z	LINE/L1	(2)	6442	6262	1368473
13	6.9	9.7	0.0	chr15	85854435	85854465	(16136724)	+	A-rich	Low_complexity	1	34	(0)	1368499
20	7.8	0.0	0.0	chr15	85854629	85854655	(16136534)	+	(GT)n	Simple_repeat	1	27	(0)	1368500
12	13.7	6.2	0.0	chr15	89334445	89334476	(12656713)	+	(ACCCAC)n	Simple_repeat	1	34	(0)	1374039
669	0.0	0.0	0.0	chr15	89335073	89335145	(12656044)	+	tRNA-Arg-CGA_	tRNA	1	73	(3)	1374041
902	25.2	15.8	2.7	chr15	90038312	90038707	(11952482)	C	L1MC4	LINE/L1	(0)	8042	7577	1375475
2084	12.1	2.1	0.6	chr15	90657729	90658053	(11333136)	C	MER44A	DNA/TcMar-Tigger	(7)	332	3	1376797
958	15.3	5.2	2.7	chr15	90661411	90661509	(11329680)	+	MER44A	DNA/TcMar-Tigger	2	101	(238)	1376803
32	3.2	0.0	0.0	chr15	90661510	90661541	(11329648)	+	(GA)n	Simple_repeat	1	32	(0)	1376804
958	15.3	5.2	2.7	chr15	90661542	90661602	(11329587)	+	MER44A	DNA/TcMar-Tigger	102	168	(171)	1376803
2310	11.1	0.3	0.0	chr15	90661603	90661900	(11329289)	C	AluSx1	SINE/Alu	(13)	299	1	1376805
13	14.2	0.0	5.7	chr15	92883099	92883133	(9108056)	+	G-rich	Low_complexity	1	35	(0)	1380697
1856	16.9	0.3	0.7	chr15	96058768	96059068	(5932121)	+	AluJb	SINE/Alu	2	301	(11)	1385315
2112	17.6	2.2	0.6	chr15	99163594	99163952	(2827237)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	1389705
517	27.3	7.4	2.7	chr15	99502124	99502379	(2488810)	C	MLT1N2	LTR/ERVL-MaLR	(13)	549	281	1390213
556	17.8	1.0	0.0	chr15	101127638	101127738	(863451)	C	LTR67B	LTR/ERVL	(3)	617	516	1392364
20	28.8	2.0	4.0	chr15	101251700	101251798	(739391)	+	(CGG)n	Simple_repeat	1	101	(0)	1392534
603	32.5	17.5	1.9	chr16	52803	53424	(90284921)	C	L2a	LINE/L2	(135)	3291	2528	1394121
15	18.9	2.3	2.2	chr16	668148	668191	(89670154)	+	(GGTCCG)n	Simple_repeat	1	45	(0)	1395064
21	4.2	7.1	6.7	chr16	680436	680491	(89657854)	+	G-rich	Low_complexity	1	60	(0)	1395074
2085	11.7	0.0	2.9	chr16	690600	690908	(89647437)	C	AluSx1	SINE/Alu	(12)	300	1	1395078
12	20.8	0.0	2.9	chr16	721433	721467	(89616878)	+	(GCAGG)n	Simple_repeat	1	35	(0)	1395116
17	10.7	7.1	2.2	chr16	1351946	1351987	(88986358)	+	(GCG)n	Simple_repeat	1	45	(0)	1395772
13	23.6	2.1	9.3	chr16	1414509	1414603	(88923742)	+	(CGGAGGC)n	Simple_repeat	1	97	(0)	1395875
264	24.6	1.4	0.0	chr16	1971582	1971650	(88366695)	+	L2a	LINE/L2	3338	3407	(19)	1396734
13	19.5	0.0	2.7	chr16	2048028	2048064	(88290281)	+	(GCGCG)n	Simple_repeat	1	37	(0)	1396836
27	18.1	8.6	3.6	chr16	2155886	2155938	(88182407)	+	G-rich	Low_complexity	1	50	(0)	1396968
26	0.0	0.0	0.0	chr16	2155939	2155963	(88182382)	+	(CGAGG)n	Simple_repeat	1	25	(0)	1396969
27	18.1	8.6	3.6	chr16	2155964	2156037	(88182308)	+	G-rich	Low_complexity	51	133	(0)	1396970
17	15.3	2.7	0.0	chr16	2251462	2251498	(88086847)	+	(CCCGGC)n	Simple_repeat	1	38	(0)	1397109
15	24.9	0.0	3.9	chr16	2268061	2268111	(88070234)	+	(CCG)n	Simple_repeat	1	51	(0)	1397131
13	20.7	5.8	1.8	chr16	2473947	2473998	(87864347)	+	G-rich	Low_complexity	1	55	(0)	1397490
2412	7.1	0.0	0.0	chr16	2983921	2984215	(87354130)	+	AluSq2	SINE/Alu	1	295	(18)	1398295
672	0.0	0.0	0.0	chr16	3150674	3150746	(87187599)	+	tRNA-Arg-CGG	tRNA	1	73	(3)	1398597
629	4.1	0.0	0.0	chr16	3152900	3152972	(87185373)	+	tRNA-Arg-AGG	tRNA	1	73	(3)	1398603
654	1.4	0.0	0.0	chr16	3157405	3157477	(87180868)	C	tRNA-Lys-AAG	tRNA	(3)	73	1	1398614
622	0.0	0.0	0.0	chr16	3182635	3182706	(87155639)	C	tRNA-Pro-CCY	tRNA	(3)	72	1	1398678
220	32.1	8.7	0.0	chr16	3500675	3500758	(86837587)	+	MIR	SINE/MIR	152	243	(19)	1399286
17	16.1	0.0	6.4	chr16	4272869	4272915	(86065430)	+	(GGC)n	Simple_repeat	1	47	(0)	1400803
60	1.8	0.0	0.0	chr16	4272948	4273003	(86065342)	+	(GT)n	Simple_repeat	1	56	(0)	1400804
19	30.2	0.0	6.4	chr16	4273125	4273233	(86065112)	+	G-rich	Low_complexity	1	109	(0)	1400805
307	28.7	11.6	6.0	chr16	4307224	4307547	(86030798)	+	L2a	LINE/L2	2958	3383	(43)	1400908
25	15.6	3.5	0.0	chr16	4351130	4351186	(85987159)	+	(GGCGCCC)n	Simple_repeat	1	59	(0)	1400992
26	12.6	3.9	0.0	chr16	4693887	4693938	(85644407)	+	G-rich	Low_complexity	1	54	(0)	1401668
16	15.1	6.8	0.0	chr16	4694053	4694096	(85644249)	+	(GGCCTG)n	Simple_repeat	1	47	(0)	1401669
15	16.9	0.0	2.9	chr16	4847517	4847551	(85490794)	+	(GCG)n	Simple_repeat	1	35	(0)	1402011
2110	11.7	0.0	1.7	chr16	8891144	8891433	(81446912)	C	AluSx1	SINE/Alu	(27)	285	1	1410069
12	8.4	0.0	6.9	chr16	9092305	9092333	(81246012)	+	(CCGGC)n	Simple_repeat	1	29	(0)	1410576
4104	16.4	7.1	1.7	chr16	10811934	10812893	(79525452)	+	L1MB2	LINE/L1	5131	6164	(7)	1414286
1457	16.9	5.6	11.0	chr16	10964740	10965158	(79373187)	C	L1MA9	LINE/L1	(33)	6279	5885	1414657
310	24.0	11.7	1.6	chr16	10981511	10981633	(79356712)	C	L1ME4b	LINE/L1	(0)	892	756	1414698
315	27.9	9.0	8.6	chr16	10981682	10981809	(79356536)	C	L1ME4b	LINE/L1	(37)	855	725	1414699
1044	21.9	1.8	0.9	chr16	10981810	10982026	(79356319)	+	MER20	DNA/hAT-Charlie	1	219	(0)	1414700
670	26.7	12.5	0.0	chr16	11224941	11225157	(79113188)	C	MIR	SINE/MIR	(1)	261	14	1415158
492	29.0	2.7	0.0	chr16	11251828	11251972	(79086373)	+	MIRb	SINE/MIR	38	186	(82)	1415241
339	22.7	6.7	1.0	chr16	11252107	11252204	(79086141)	C	UCON80	DNA/hAT?	(27)	115	12	1415242
12	4.3	8.3	0.0	chr16	11256035	11256058	(79082287)	+	(CCCT)n	Simple_repeat	1	26	(0)	1415250
1467	14.8	8.7	5.9	chr16	11575859	11576161	(78762184)	C	AluJr	SINE/Alu	(0)	312	1	1416006
21	30.8	0.0	0.0	chr16	11742653	11742720	(78595625)	+	(GCC)n	Simple_repeat	1	68	(0)	1416395
612	19.7	13.8	3.1	chr16	11783440	11783633	(78554712)	C	MER20	DNA/hAT-Charlie	(1)	218	1	1416466
36	25.6	1.2	7.0	chr16	11797137	11797305	(78541040)	+	(GCG)n	Simple_repeat	1	171	(0)	1416501
218	25.7	19.7	3.7	chr16	12547338	12547527	(77790818)	C	L2b	LINE/L2	(614)	2805	2578	1418149
610	1.4	0.0	0.0	chr16	14285893	14285964	(76052381)	+	tRNA-Thr-ACG	tRNA	1	72	(3)	1421772
305	24.5	21.4	3.2	chr16	17134810	17134965	(73203380)	+	MIR	SINE/MIR	47	238	(24)	1428381
336	31.8	6.8	0.0	chr16	17963441	17963550	(72374795)	C	LTR81AB	LTR/Gypsy	(463)	690	573	1430166
345	22.7	6.0	6.8	chr16	19886270	19886387	(70451958)	+	L2a	LINE/L2	3304	3420	(6)	1434582
427	29.6	3.9	4.4	chr16	19886480	19886659	(70451686)	+	MIR	SINE/MIR	84	262	(0)	1434583
638	18.7	2.2	0.7	chr16	20300458	20300592	(70037753)	+	MIR3	SINE/MIR	60	196	(12)	1435609
15	23.1	1.9	3.6	chr16	21599621	21599674	(68738671)	+	(GGC)n	Simple_repeat	1	55	(0)	1438246
46	0.0	0.0	0.0	chr16	21935154	21935192	(68403153)	+	(TG)n	Simple_repeat	1	39	(0)	1438960
759	0.0	0.0	0.0	chr16	22195710	22195792	(68142553)	C	tRNA-Leu-CTA	tRNA	(2)	83	1	1439502
14	21.5	2.2	2.2	chr16	22206227	22206271	(68132074)	+	(CGCCC)n	Simple_repeat	1	46	(0)	1439529
734	0.0	0.0	0.0	chr16	22297140	22297221	(68041124)	+	tRNA-Leu-CTY	tRNA	1	82	(3)	1439785
370	35.0	4.3	1.3	chr16	22298460	22298618	(68039727)	C	MIR	SINE/MIR	(97)	165	2	1439787
313	30.4	11.1	1.8	chr16	22298633	22298803	(68039542)	+	MIR	SINE/MIR	1	189	(73)	1439788
336	29.7	8.6	6.3	chr16	23334359	23334563	(67003782)	C	Charlie17a	DNA/hAT-Charlie	(0)	217	8	1442027
701	28.9	4.9	1.8	chr16	23334682	23334959	(67003386)	C	L1ME3G	LINE/L1	(437)	487	201	1442028
292	34.7	4.9	2.7	chr16	23336083	23336250	(67002095)	+	MIR1_Amn	SINE/MIR	11	180	(88)	1442033
20	10.8	5.0	0.0	chr16	24539917	24539956	(65798389)	+	(GGC)n	Simple_repeat	1	42	(0)	1444971
12	15.8	6.5	4.1	chr16	24663102	24663137	(65675208)	+	GA-rich	Low_complexity	1	38	(0)	1445220
2737	19.3	8.1	2.5	chr16	24663138	24663270	(65675075)	C	MER77	LTR/ERVL	(0)	604	473	1445221
2103	12.9	0.3	1.3	chr16	24663271	24663581	(65674764)	+	AluSx1	SINE/Alu	1	308	(4)	1445222
46	5.7	0.0	0.0	chr16	24729669	24729723	(65608622)	+	(GCG)n	Simple_repeat	1	55	(0)	1445420
203	23.4	10.5	1.3	chr16	25055676	25055753	(65282592)	+	L3	LINE/CR1	4006	4091	(8)	1446124
2348	8.5	0.7	0.3	chr16	25055840	25056145	(65282200)	+	AluSq2	SINE/Alu	1	307	(6)	1446125
16	18.9	2.4	0.0	chr16	28212035	28212076	(62126269)	+	G-rich	Low_complexity	1	43	(0)	1452865
190	16.5	22.9	2.1	chr16	28212245	28212337	(62126008)	C	L2a	LINE/L2	(3)	3423	3306	1452866
404	33.1	1.5	0.3	chr16	28277941	28278110	(62060235)	+	MIR	SINE/MIR	43	212	(56)	1453081
618	23.5	3.3	20.2	chr16	28523218	28523489	(61814856)	+	MER66-int	LTR/ERV1	1125	1347	(5329)	1453742
1584	17.3	0.0	1.2	chr16	29644292	29644458	(60693887)	+	AluJo	SINE/Alu	139	303	(9)	1456172
783	28.2	15.3	0.8	chr16	29644460	29644942	(60693403)	+	L2a	LINE/L2	2839	3425	(1)	1456174
25	10.2	0.0	2.3	chr16	30183646	30183689	(60154656)	+	(CTC)n	Simple_repeat	1	44	(0)	1457487
15	17.7	5.0	2.4	chr16	30183779	30183818	(60154527)	+	(GC)n	Simple_repeat	1	42	(0)	1457488
1782	22.5	8.8	1.9	chr16	30350724	30351189	(59987156)	C	MLT1D	LTR/ERVL-MaLR	(1)	504	4	1457833
1333	17.1	4.2	1.4	chr16	30873268	30873546	(59464799)	+	L1MB8	LINE/L1	5887	6173	(5)	1459061
2100	10.5	1.0	1.0	chr16	30873567	30873862	(59464483)	+	AluSz	SINE/Alu	1	296	(16)	1459062
19	11.7	2.7	0.0	chr16	30893950	30893986	(59444359)	+	(CGGGGC)n	Simple_repeat	1	38	(0)	1459122
195	36.6	4.1	0.0	chr16	30950171	30950263	(59388082)	+	MIR3	SINE/MIR	19	115	(93)	1459272
1874	21.5	6.6	1.3	chr16	31874324	31874780	(58463565)	C	MER57E3	LTR/ERV1	(4)	483	1	1460888
260	21.7	9.9	6.9	chr16	47143451	47143941	(43194404)	+	LTR12C	LTR/ERV1	122	628	(951)	1466777
57	0.0	0.0	0.0	chr16	48098091	48098139	(42240206)	+	(AC)n	Simple_repeat	1	49	(0)	1468123
230	23.1	4.4	4.4	chr16	48098145	48098212	(42240133)	C	OldhAT1	DNA/hAT-Ac	(2621)	227	160	1468124
3394	24.0	8.1	5.8	chr16	48458416	48458791	(41879554)	C	L1ME3A	LINE/L1	(576)	6095	5724	1468843
278	32.4	0.0	6.8	chr16	53061873	53062018	(37276327)	+	MER113	DNA/hAT-Charlie	4	139	(382)	1477141
722	24.8	8.5	5.7	chr16	53062120	53062452	(37275893)	+	MER113	DNA/hAT-Charlie	135	477	(44)	1477142
18	22.7	4.8	4.5	chr16	53130468	53130551	(37207794)	+	(GGC)n	Simple_repeat	1	88	(0)	1477320
905	19.5	0.6	0.0	chr16	56898850	56899013	(33439332)	+	MER5A1	DNA/hAT-Charlie	1	165	(1)	1483929
336	24.5	22.8	0.0	chr16	56899056	56899214	(33439131)	+	L2a	LINE/L2	3221	3426	(0)	1483930
594	23.6	5.6	15.5	chr16	56990048	56990388	(33347957)	C	L1MC5	LINE/L1	(59)	9245	8989	1484120
249	31.5	10.1	0.0	chr16	57042132	57042220	(33296125)	+	MIRb	SINE/MIR	162	260	(8)	1484225
625	8.4	0.0	0.0	chr16	57299951	57300033	(33038312)	+	tRNA-Leu-CTG	tRNA	1	83	(3)	1484766
625	8.4	0.0	0.0	chr16	57300480	57300562	(33037783)	C	tRNA-Leu-CTG	tRNA	(3)	83	1	1484768
2373	10.6	0.0	0.0	chr16	57367694	57367996	(32970349)	C	AluSz	SINE/Alu	(9)	303	1	1484933
19	30.3	0.0	5.3	chr16	57368118	57368156	(32970189)	+	GA-rich	Low_complexity	1	37	(0)	1484934
1958	15.2	0.0	2.0	chr16	57368157	57368458	(32969887)	+	AluJb	SINE/Alu	2	297	(15)	1484935
298	25.5	3.3	4.2	chr16	57544592	57544695	(32793650)	+	MIR3	SINE/MIR	89	190	(40)	1485285
492	28.1	1.3	1.1	chr16	57648889	57649069	(32689276)	+	MIRb	SINE/MIR	75	255	(13)	1485494
937	20.7	5.0	0.0	chr16	58215312	58215519	(32122826)	+	MER20	DNA/hAT-Charlie	1	219	(0)	1486651
15	18.3	7.5	4.2	chr16	66751661	66751727	(23586618)	+	(GCC)n	Simple_repeat	1	72	(0)	1500336
13	28.9	1.4	5.3	chr16	66751777	66751850	(23586495)	+	(GGC)n	Simple_repeat	1	75	(0)	1500337
14	17.9	6.5	4.5	chr16	67014089	67014150	(23324195)	+	(CCGC)n	Simple_repeat	1	66	(0)	1500882
60	22.3	2.1	4.1	chr16	67029050	67029240	(23309105)	+	(GGC)n	Simple_repeat	1	195	(0)	1500922
13	21.6	4.7	4.5	chr16	67279303	67279366	(23058979)	+	G-rich	Low_complexity	1	67	(0)	1501369
15	13.8	0.0	2.9	chr16	67279460	67279493	(23058852)	+	(GGCGC)n	Simple_repeat	1	34	(0)	1501370
15	17.8	2.6	0.0	chr16	67562793	67562830	(22775515)	+	(CGGCGC)n	Simple_repeat	1	39	(0)	1501892
342	32.8	7.6	5.5	chr16	67834041	67834221	(22504124)	+	MIRb	SINE/MIR	84	268	(0)	1502444
16	17.4	0.0	4.7	chr16	67842337	67842379	(22495966)	+	(GCGG)n	Simple_repeat	1	43	(0)	1502467
2594	5.5	0.3	0.3	chr16	69386211	69386520	(20951825)	+	AluSp	SINE/Alu	1	310	(3)	1505677
16	17.3	8.1	3.0	chr16	70251620	70251681	(20086664)	+	(CCG)n	Simple_repeat	1	67	(0)	1507543
306	29.3	9.0	3.6	chr16	70476834	70477010	(19861335)	C	L2c	LINE/L2	(3)	3423	3225	1508084
2259	7.8	0.0	0.3	chr16	71818390	71818698	(18519647)	C	AluSx3	SINE/Alu	(0)	311	1	1510441
17	24.6	1.4	5.3	chr16	71884005	71884078	(18454267)	+	(GCCGG)n	Simple_repeat	1	75	(0)	1510563
14	8.9	11.1	0.0	chr16	71884098	71884133	(18454212)	+	(CAGA)n	Simple_repeat	1	40	(0)	1510564
15	24.6	0.0	0.0	chr16	71884210	71884252	(18454093)	+	(CCTCCC)n	Simple_repeat	1	43	(0)	1510565
236	28.0	21.9	1.4	chr16	74984322	74984466	(15353879)	C	MIR	SINE/MIR	(77)	185	3	1515868
3147	13.8	9.1	1.8	chr16	75378802	75379576	(14958769)	+	L1MD	LINE/L1	2687	3523	(2623)	1516655
1023	19.1	8.0	1.6	chr16	75379575	75379830	(14958515)	+	L1MD1	LINE/L1	5965	6238	(4)	1516656
271	17.4	0.0	0.0	chr16	80767752	80767797	(9570548)	C	L2a	LINE/L2	(6)	3420	3375	1525865
192	27.6	12.1	0.0	chr16	81007744	81007801	(9330544)	C	L2a	LINE/L2	(2)	3424	3359	1526294
2324	9.9	0.0	0.0	chr16	81007825	81008127	(9330218)	+	AluSx1	SINE/Alu	1	303	(9)	1526295
407	36.8	5.0	0.0	chr16	81481283	81481472	(8856873)	C	MIR	SINE/MIR	(32)	230	31	1527363
2074	18.2	12.6	2.2	chr16	81481607	81481878	(8856467)	C	MLT1D	LTR/ERVL-MaLR	(3)	502	186	1527364
1379	25.0	10.0	1.1	chr16	81809154	81809598	(8528747)	+	LTR16C	LTR/ERVL	1	489	(0)	1528094
12	9.5	0.0	4.0	chr16	81821384	81821408	(8516937)	+	(TGAA)n	Simple_repeat	1	25	(0)	1528126
206	28.2	4.9	9.3	chr16	82654091	82654219	(7684126)	C	L2c	LINE/L2	(2)	3385	3263	1529604
14	12.4	2.6	5.0	chr16	84116591	84116629	(6221716)	+	(GCCCCC)n	Simple_repeat	1	40	(0)	1532174
180	41.9	4.7	4.7	chr16	85570736	85570993	(4767352)	C	L2c	LINE/L2	(18)	3369	3112	1535078
377	23.2	2.9	0.0	chr16	85571065	85571163	(4767182)	C	MER5A1	DNA/hAT-Charlie	(10)	156	55	1535079
2015	9.8	0.7	0.7	chr16	85820761	85821034	(4517311)	+	AluSg	SINE/Alu	5	278	(32)	1535505
47	0.0	0.0	0.0	chr16	85821035	85821077	(4517268)	+	(ACAAA)n	Simple_repeat	1	43	(0)	1535506
196	26.5	0.0	0.0	chr16	85821095	85821143	(4517202)	+	MER5B	DNA/hAT-Charlie	1	49	(129)	1535507
181	17.6	0.0	5.6	chr16	85821176	85821211	(4517134)	+	MER5A	DNA/hAT-Charlie	142	175	(14)	1535508
318	22.9	7.9	0.9	chr16	85821248	85821353	(4516992)	+	MER5A	DNA/hAT-Charlie	44	157	(32)	1535509
1397	18.9	13.0	0.0	chr16	85935689	85935995	(4402350)	+	MLT1D	LTR/ERVL-MaLR	153	505	(0)	1535700
679	0.0	0.0	0.0	chr16	87384022	87384094	(2954251)	C	tRNA-Met_	tRNA	(3)	73	1	1538340
26	21.1	1.5	1.5	chr16	87392347	87392413	(2945932)	+	(CGC)n	Simple_repeat	1	68	(0)	1538356
15	12.2	0.0	0.0	chr16	88803785	88803811	(1534534)	+	(CTTC)n	Simple_repeat	1	27	(0)	1540471
17	15.3	0.0	2.6	chr16	89657993	89658030	(680315)	+	G-rich	Low_complexity	1	38	(0)	1541616
12	19.9	5.0	0.0	chr16	89701677	89701716	(636629)	+	(CCGCGCG)n	Simple_repeat	1	42	(0)	1541696
15	22.5	0.0	2.3	chr16	89720846	89720888	(617457)	+	(CGG)n	Simple_repeat	1	43	(0)	1541725
2472	5.4	0.0	0.0	chr16	89948269	89948562	(389783)	C	AluY	SINE/Alu	(17)	294	1	1542143
1555	10.0	18.4	0.0	chr17	1183929	1184168	(82073273)	+	AluSx	SINE/Alu	1	294	(18)	1546516
16	8.5	4.7	6.7	chr17	1456146	1456192	(81801249)	+	(GCC)n	Simple_repeat	1	46	(0)	1547172
353	27.2	8.8	0.8	chr17	1487018	1487143	(81770298)	+	MIRb	SINE/MIR	80	216	(52)	1547235
17	10.8	10.8	4.2	chr17	1562588	1562652	(81694789)	+	(CGGCC)n	Simple_repeat	1	72	(0)	1547358
14	13.4	7.0	2.2	chr17	1724837	1724879	(81532562)	+	(GCCCCA)n	Simple_repeat	1	46	(0)	1547675
17	26.5	0.0	3.2	chr17	1829801	1829862	(81427579)	+	(CCCGC)n	Simple_repeat	1	62	(0)	1547918
2200	8.1	0.3	0.7	chr17	3711371	3711683	(79545758)	C	AluSx1	SINE/Alu	(0)	312	1	1551561
2208	8.5	1.4	1.0	chr17	3712662	3712955	(79544486)	+	AluSx1	SINE/Alu	1	295	(17)	1551565
625	33.3	9.0	4.7	chr17	3712956	3713081	(79544360)	+	L1M5	LINE/L1	4280	4405	(1741)	1551564
1717	17.4	3.3	1.3	chr17	3713082	3713379	(79544062)	+	AluJr	SINE/Alu	1	304	(8)	1551566
12	16.1	0.0	3.3	chr17	4939771	4939800	(78317641)	+	(CCCTT)n	Simple_repeat	1	30	(0)	1554104
15	27.8	2.9	4.2	chr17	4939941	4940010	(78317431)	+	(CG)n	Simple_repeat	1	72	(0)	1554105
12	12.8	8.8	0.0	chr17	4948398	4948431	(78309010)	+	(GCT)n	Simple_repeat	1	37	(0)	1554112
18	19.4	0.0	0.0	chr17	4948969	4949009	(78308432)	+	(GCGCCT)n	Simple_repeat	1	41	(0)	1554113
251	32.7	3.8	0.7	chr17	6161736	6161886	(77095555)	+	L1ME3G	LINE/L1	473	628	(296)	1556508
19	17.3	2.1	2.0	chr17	6444058	6444105	(76813336)	+	G-rich	Low_complexity	1	49	(0)	1557110
15	6.5	9.1	0.0	chr17	7484513	7484545	(75772896)	+	(CCTTTT)n	Simple_repeat	1	36	(0)	1558912
16	18.6	6.1	0.0	chr17	7614616	7614664	(75642777)	+	(CCGGAG)n	Simple_repeat	1	52	(0)	1559152
41	33.8	1.1	2.1	chr17	7614701	7614891	(75642550)	+	(GCC)n	Simple_repeat	1	193	(0)	1559153
673	2.6	0.0	0.0	chr17	8119155	8119230	(75138211)	+	tRNA-Lys-AAA	tRNA	1	76	(0)	1560127
643	2.8	0.0	0.0	chr17	8119752	8119823	(75137618)	+	tRNA-Gln-CAG	tRNA	1	72	(3)	1560129
707	2.4	0.0	0.0	chr17	8120314	8120395	(75137046)	C	tRNA-Leu-CTY	tRNA	(3)	82	1	1560130
542	4.1	0.0	17.1	chr17	8120925	8121012	(75136429)	+	tRNA-Arg-AGA	tRNA	1	73	(3)	1560131
648	1.4	0.0	0.0	chr17	8125746	8125817	(75131624)	+	tRNA-Gly-GGY	tRNA	1	72	(2)	1560137
779	1.2	0.0	0.0	chr17	8138878	8138962	(75118479)	C	tRNA-Ser-TCG	tRNA	(0)	85	1	1560170
13	0.0	14.3	0.0	chr17	8139020	8139047	(75118394)	+	(CCGGCT)n	Simple_repeat	1	32	(0)	1560171
691	0.0	0.0	0.0	chr17	8139452	8139525	(75117916)	C	tRNA-Thr-ACY	tRNA	(3)	74	1	1560172
1234	2.2	0.0	0.0	chr17	8173453	8173588	(75083853)	C	U8	snRNA	(0)	136	1	1560231
670	0.0	0.0	0.0	chr17	8186358	8186429	(75071012)	+	tRNA-Trp-TGG	tRNA	1	72	(3)	1560263
650	1.4	0.0	0.0	chr17	8220869	8220940	(75036501)	C	tRNA-Trp-TGG	tRNA	(3)	72	1	1560357
659	1.4	0.0	0.0	chr17	8221548	8221619	(75035822)	+	tRNA-Gly-GGA	tRNA	1	72	(3)	1560359
653	0.0	0.0	0.0	chr17	8222238	8222309	(75035132)	C	tRNA-Asp-GAY	tRNA	(3)	72	1	1560360
652	1.4	0.0	0.0	chr17	8222831	8222904	(75034537)	C	tRNA-Pro-CCG	tRNA	(1)	74	1	1560361
678	3.9	0.0	0.0	chr17	8226232	8226308	(75031133)	C	tRNA-Thr-ACY	tRNA	(0)	77	1	1560365
654	1.4	0.0	0.0	chr17	8226991	8227064	(75030377)	C	tRNA-Ile-ATT	tRNA	(3)	74	1	1560367
651	30.9	12.9	9.5	chr17	8949908	8950279	(74307162)	+	L3	LINE/CR1	2739	3154	(945)	1561755
227	17.6	0.0	0.0	chr17	8950288	8950338	(74307103)	C	L1MB3	LINE/L1	(6)	6177	6127	1561761
5390	12.3	4.2	0.6	chr17	8950334	8951262	(74306179)	C	L1PA16	LINE/L1	(0)	6166	5194	1561762
21	14.5	0.0	0.0	chr17	12020906	12020943	(71236498)	+	(GCG)n	Simple_repeat	1	38	(0)	1567443
17	19.8	1.7	6.6	chr17	12789616	12789675	(70467766)	+	(GCG)n	Simple_repeat	1	61	(0)	1568664
23	6.9	1.9	7.4	chr17	16000038	16000090	(67257351)	+	G-rich	Low_complexity	1	54	(0)	1574054
357	27.2	5.5	2.7	chr17	16416707	16416818	(66840623)	+	MIR3	SINE/MIR	44	152	(116)	1574948
200	23.2	10.9	6.8	chr17	16964851	16964938	(66292503)	+	MIR1_Amn	SINE/MIR	86	177	(53)	1575835
546	23.3	9.5	0.0	chr17	16970423	16970555	(66286886)	+	MER103C	DNA/hAT-Charlie	47	193	(104)	1575848
21	26.2	4.5	1.1	chr17	17303357	17303444	(65953997)	+	(CGCGCGC)n	Simple_repeat	1	92	(0)	1576399
19	14.4	9.5	3.7	chr17	17303557	17303630	(65953811)	+	(CGG)n	Simple_repeat	1	81	(0)	1576400
21	29.5	0.0	5.7	chr17	17477089	17477193	(65780248)	+	(GCCGCC)n	Simple_repeat	1	105	(0)	1576739
451	25.2	11.2	4.4	chr17	17839905	17840062	(65417379)	C	MIR	SINE/MIR	(13)	249	80	1577452
12	16.5	0.0	0.0	chr17	17960188	17960214	(65297227)	+	(TTCA)n	Simple_repeat	1	27	(0)	1577662
458	24.5	1.4	23.7	chr17	17960237	17960337	(65297104)	+	MIRb	SINE/MIR	14	115	(153)	1577663
1797	15.4	0.0	2.0	chr17	17960338	17960636	(65296805)	C	AluJb	SINE/Alu	(18)	294	2	1577664
34	13.2	0.0	0.0	chr17	18184331	18184388	(65073053)	+	(GCCGCC)n	Simple_repeat	1	58	(0)	1578112
2016	0.5	0.0	0.0	chr17	19063920	19064136	(64193305)	C	U3	snRNA	(0)	217	1	1579728
640	2.8	0.0	0.0	chr17	19508181	19508252	(63749189)	+	tRNA-Trp-TGG	tRNA	1	72	(3)	1580743
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
558	19.4	18.7	0.0	chr17	27349026	27349273	(55908168)	+	MER52D	LTR/ERV1	10	314	(1809)	1586590
873	21.2	4.1	3.2	chr17	27466966	27467184	(55790257)	C	MIR	SINE/MIR	(1)	261	41	1586844
299	25.9	11.8	2.2	chr17	27477404	27477541	(55779900)	C	MIR3	SINE/MIR	(54)	154	2	1586866
1898	15.2	0.0	1.6	chr17	27477709	27478017	(55779424)	C	AluJo	SINE/Alu	(8)	304	1	1586867
206	23.2	6.7	0.0	chr17	28719340	28719395	(54538046)	+	MIR3	SINE/MIR	67	126	(82)	1589195
13	15.2	0.0	3.2	chr17	28744082	28744112	(54513329)	+	(CCCG)n	Simple_repeat	1	31	(0)	1589232
17	25.1	0.0	4.8	chr17	28897639	28897700	(54359741)	+	(CGCC)n	Simple_repeat	1	62	(0)	1589579
13	25.4	3.0	4.4	chr17	28902918	28902983	(54354458)	+	(CCCCGCG)n	Simple_repeat	1	68	(0)	1589592
13	17.0	3.0	0.0	chr17	29589693	29589725	(53667716)	+	(CCCCG)n	Simple_repeat	1	34	(0)	1590971
13	25.9	3.2	3.1	chr17	29589778	29589840	(53667601)	+	(GGCCGC)n	Simple_repeat	1	65	(0)	1590972
771	31.6	1.7	0.0	chr17	30173612	30173848	(53083593)	C	MIR	SINE/MIR	(14)	248	8	1592095
29	0.0	0.0	0.0	chr17	30291955	30291981	(52965460)	+	(CGG)n	Simple_repeat	1	27	(0)	1592285
646	0.0	0.0	0.0	chr17	31550074	31550145	(51707296)	+	tRNA-Thr-ACG	tRNA	1	72	(3)	1594799
17	20.5	3.9	1.9	chr17	32007641	32007692	(51249749)	+	(CCG)n	Simple_repeat	1	54	(0)	1595844
56	0.0	0.0	0.0	chr17	32142452	32142501	(51114940)	+	(CCG)n	Simple_repeat	1	50	(0)	1596168
295	31.4	11.4	0.8	chr17	32523306	32523430	(50734011)	C	MIR3	SINE/MIR	(49)	159	20	1596963
17	26.4	1.9	0.0	chr17	35089065	35089118	(48168323)	+	(CGC)n	Simple_repeat	1	55	(0)	1601648
1029	15.7	10.1	2.0	chr17	35849508	35849708	(47407733)	C	MER20	DNA/hAT-Charlie	(0)	219	1	1602926
476	31.5	15.9	7.4	chr17	35849709	35850081	(47407360)	C	L2	LINE/L2	(1420)	1999	1578	1602922
2582	17.6	6.3	2.7	chr17	36034035	36034554	(47222887)	+	MER34	LTR/ERV1	1	540	(2)	1603293
2114	11.3	0.7	0.3	chr17	36197069	36197370	(47060071)	+	AluSp	SINE/Alu	2	304	(9)	1603532
19	6.2	5.9	0.0	chr17	37359406	37359439	(45898002)	+	(GGGC)n	Simple_repeat	1	36	(0)	1605677
47	0.0	0.0	0.0	chr17	37764954	37764993	(45492448)	+	(AC)n	Simple_repeat	1	40	(0)	1606497
16	16.8	0.0	0.0	chr17	37765114	37765140	(45492301)	+	(T)n	Simple_repeat	1	27	(0)	1606498
16	7.4	0.0	6.1	chr17	38674846	38674882	(44582559)	+	(CCCGGG)n	Simple_repeat	1	34	(0)	1608325
13	13.2	0.0	0.0	chr17	38702362	38702386	(44555055)	+	(CGG)n	Simple_repeat	1	25	(0)	1608405
13	10.4	6.5	0.0	chr17	38702408	38702438	(44555003)	+	G-rich	Low_complexity	1	33	(0)	1608406
23	14.5	0.0	0.0	chr17	38751735	38751772	(44505669)	+	(A)n	Simple_repeat	1	38	(0)	1608488
698	1.3	0.0	0.0	chr17	38751778	38751854	(44505587)	C	tRNA-Asn-AAC	tRNA	(0)	77	1	1608489
652	2.7	0.0	0.0	chr17	38861683	38861755	(44395686)	C	tRNA-Cys-TGY	tRNA	(2)	73	1	1608756
641	2.7	0.0	0.0	chr17	38867645	38867717	(44389724)	+	tRNA-Cys-TGY	tRNA	1	73	(2)	1608775
628	4.1	0.0	0.0	chr17	38869291	38869363	(44388078)	C	tRNA-Cys-TGY	tRNA	(2)	73	1	1608779
641	2.7	0.0	0.0	chr17	39153733	39153805	(44103636)	C	tRNA-Cys-TGY	tRNA	(2)	73	1	1609432
641	2.7	0.0	0.0	chr17	39154490	39154562	(44102879)	C	tRNA-Cys-TGY	tRNA	(2)	73	1	1609433
13	21.9	0.0	2.6	chr17	39980927	39980965	(43276476)	+	(GGCCCC)n	Simple_repeat	1	39	(0)	1611119
13	4.1	8.0	0.0	chr17	39980983	39981007	(43276434)	+	(GGCGC)n	Simple_repeat	1	27	(0)	1611120
1962	21.8	1.5	2.4	chr17	40552783	40553192	(42704249)	+	MLT1A1	LTR/ERVL-MaLR	3	408	(0)	1612297
733	18.1	3.1	1.3	chr17	40556129	40556285	(42701156)	+	MER5A	DNA/hAT-Charlie	2	161	(28)	1612299
506	22.1	3.0	3.0	chr17	40556298	40556432	(42701009)	C	MER5A1	DNA/hAT-Charlie	(0)	166	32	1612300
588	14.0	6.1	4.5	chr17	40563821	40563932	(42693509)	+	MER63B	DNA/hAT-Blackjack	273	386	(50)	1612309
508	25.8	4.4	0.7	chr17	40601710	40601861	(42655580)	+	MER5B	DNA/hAT-Charlie	17	174	(4)	1612354
343	21.6	13.7	0.0	chr17	40619969	40620056	(42637385)	+	MER81	DNA/hAT-Blackjack	1	102	(12)	1612393
184	30.4	2.8	4.2	chr17	41665811	41665882	(41591559)	+	L2c	LINE/L2	3316	3386	(1)	1613989
19	15.2	2.5	9.8	chr17	42184176	42184255	(41073186)	+	(GGCGC)n	Simple_repeat	1	82	(0)	1615097
17	24.2	0.0	0.0	chr17	42532066	42532109	(40725332)	+	(CAG)n	Simple_repeat	1	44	(0)	1615836
35	20.4	1.0	4.1	chr17	42532129	42532225	(40725216)	+	(CGC)n	Simple_repeat	1	98	(0)	1615837
17	13.2	0.0	0.0	chr17	42536275	42536307	(40721134)	+	(GGTGGC)n	Simple_repeat	1	33	(0)	1615844
18	19.8	6.0	2.8	chr17	42536474	42536540	(40720901)	+	(GGC)n	Simple_repeat	1	71	(0)	1615845
13	22.1	0.0	0.0	chr17	42980635	42980666	(40276775)	+	GA-rich	Low_complexity	1	32	(0)	1616805
680	25.3	1.7	0.6	chr17	43367908	43368082	(39889359)	C	U2	snRNA	(6)	182	6	1617635
12	19.6	2.9	0.0	chr17	44123383	44123417	(39134024)	+	(GGAGCGC)n	Simple_repeat	1	36	(0)	1619259
25	25.5	2.3	2.2	chr17	44123484	44123570	(39133871)	+	(GGC)n	Simple_repeat	1	89	(0)	1619260
12	17.8	6.2	5.9	chr17	44557402	44557465	(38699976)	+	(AGCGAG)n	Simple_repeat	1	68	(0)	1620208
427	29.1	14.3	1.9	chr17	45051197	45051403	(38206038)	+	MIRb	SINE/MIR	25	261	(7)	1621259
2219	8.9	0.3	0.0	chr17	45299808	45300100	(37957341)	+	AluSz	SINE/Alu	1	294	(18)	1621748
6357	26.6	6.9	7.0	chr17	47065564	47068369	(36189072)	C	HERVIP10FH-int	LTR/ERV1	(259)	4843	2041	1625273
254	33.9	0.0	0.0	chr17	47230014	47230072	(36027369)	C	Plat_L3	LINE/CR1	(20)	3566	3508	1625610
604	33.2	11.9	3.1	chr17	47231266	47231625	(36025816)	+	L3	LINE/CR1	2206	2601	(1498)	1625615
610	32.4	11.4	0.0	chr17	47231673	47231928	(36025513)	+	L3	LINE/CR1	3810	4098	(1)	1625615
247	25.0	0.0	1.5	chr17	47895335	47895399	(35362042)	C	MER5A1	DNA/hAT-Charlie	(0)	166	103	1626910
20	30.1	1.0	4.0	chr17	48430246	48430345	(34827096)	+	G-rich	Low_complexity	1	101	(0)	1627828
2130	12.3	2.6	0.0	chr17	48814777	48815076	(34442365)	C	AluSp	SINE/Alu	(4)	309	2	1628548
379	30.2	9.3	0.2	chr17	49191589	49191799	(34065642)	C	L1ME4b	LINE/L1	(2222)	555	316	1629399
658	2.7	0.0	0.0	chr17	49192528	49192600	(34064841)	+	tRNA-Gln-CAA	tRNA	1	73	(2)	1629400
13	22.1	2.3	2.2	chr17	50478731	50478775	(32778666)	+	G-rich	Low_complexity	1	45	(0)	1631863
20	20.1	1.3	7.5	chr17	50707671	50707749	(32549692)	+	(GCCCC)n	Simple_repeat	1	80	(0)	1632279
12	11.9	10.8	0.0	chr17	50867665	50867701	(32389740)	+	(CCTTCTC)n	Simple_repeat	1	41	(0)	1632612
13	13.1	0.0	0.0	chr17	56833697	56833721	(26423720)	+	(CGG)n	Simple_repeat	1	25	(0)	1642079
242	25.3	3.1	7.8	chr17	57370283	57370385	(25887056)	C	MamRep434	DNA/TcMar-Tigger	(2)	424	327	1643163
312	30.9	9.7	2.6	chr17	57441073	57441225	(25816216)	C	MamSINE1	SINE/tRNA-RTE	(9)	281	117	1643279
307	33.3	1.9	5.5	chr17	58337040	58337205	(24920236)	+	MIRb	SINE/MIR	5	165	(43)	1644832
2344	29.3	2.1	4.6	chr17	58447134	58447868	(24809573)	+	L1MA3	LINE/L1	708	2098	(5467)	1645005
1578	18.6	4.9	0.4	chr17	58631185	58631459	(24625982)	+	AluSz6	SINE/Alu	6	293	(19)	1645372
725	21.4	11.5	2.0	chr17	58631641	58631836	(24625605)	C	U3	snRNA	(0)	217	1	1645373
800	22.9	6.1	1.1	chr17	58658800	58658987	(24598454)	C	AluJr	SINE/Alu	(5)	307	110	1645453
472	20.1	7.9	3.5	chr17	58659153	58659296	(24598145)	C	U1	snRNA	(5)	160	10	1645454
886	18.4	0.6	1.2	chr17	58679526	58679690	(24577751)	C	U1	snRNA	(1)	164	1	1645511
2383	4.6	0.4	0.7	chr17	59209539	59209839	(24047602)	C	AluSq2	SINE/Alu	(0)	313	9	1646700
18	14.9	0.0	0.0	chr17	59209850	59209880	(24047561)	+	(T)n	Simple_repeat	1	31	(0)	1646701
13	6.5	8.8	2.7	chr17	59331843	59331876	(23925565)	+	(GGCGCG)n	Simple_repeat	1	37	(0)	1647026
13	21.1	2.6	0.0	chr17	59331883	59331921	(23925520)	+	(GCTCCGG)n	Simple_repeat	1	40	(0)	1647027
414	15.8	0.0	0.0	chr17	59827955	59828011	(23429430)	+	AluSc8	SINE/Alu	136	192	(119)	1648041
22	4.0	0.0	0.0	chr17	59838096	59838121	(23419320)	+	(T)n	Simple_repeat	1	26	(0)	1648064
956	10.5	0.0	3.0	chr17	59892262	59892394	(23365047)	+	FLAM_C	SINE/Alu	3	131	(12)	1648195
573	19.6	1.4	1.6	chr17	59892530	59892669	(23364772)	C	MIRb	SINE/MIR	(90)	178	38	1648196
325	33.7	14.5	2.9	chr17	60638970	60639123	(22618318)	C	L2c	LINE/L2	(1)	3374	3219	1649723
21	18.0	8.7	0.0	chr17	62478994	62479062	(20778379)	+	(CCGGCGC)n	Simple_repeat	1	75	(0)	1653081
14	9.2	0.0	11.4	chr17	63622483	63622535	(19634906)	+	(GGCG)n	Simple_repeat	1	46	(0)	1655052
16	22.6	8.3	0.0	chr17	63622634	63622705	(19634736)	+	(CGCAGCC)n	Simple_repeat	1	78	(0)	1655053
2499	6.4	0.0	0.6	chr17	63742648	63742959	(19514482)	+	AluY	SINE/Alu	1	310	(1)	1655273
13	21.5	0.0	4.8	chr17	63842651	63842692	(19414749)	+	(CCCGC)n	Simple_repeat	1	42	(0)	1655439
23	28.4	4.4	1.7	chr17	63842676	63842810	(19414631)	+	G-rich	Low_complexity	1	138	(0)	1655440
25	22.3	1.6	0.0	chr17	64662112	64662174	(18595267)	+	(GCC)n	Simple_repeat	1	64	(0)	1657018
1150	12.7	0.0	1.2	chr17	64918754	64918918	(18338523)	+	AluSx1	SINE/Alu	2	164	(148)	1657590
12	21.5	4.4	2.1	chr17	64918991	64919035	(18338406)	+	(CGG)n	Simple_repeat	1	47	(0)	1657591
480	34.8	2.6	2.6	chr17	65182299	65182525	(18074916)	C	MIR	SINE/MIR	(8)	254	28	1658158
1143	23.3	7.9	5.2	chr17	66706278	66706353	(16551088)	+	MER58B	DNA/hAT-Charlie	2	81	(260)	1660681
2389	6.0	1.7	2.7	chr17	66706354	66706651	(16550790)	+	AluY	SINE/Alu	1	295	(16)	1660682
193	33.6	8.6	0.0	chr17	66717697	66717824	(16539617)	+	MIR3	SINE/MIR	62	201	(7)	1660696
12	15.8	0.0	3.3	chr17	67378210	67378239	(15879202)	+	(CCGGC)n	Simple_repeat	1	30	(0)	1661913
487	11.8	0.0	0.0	chr17	68019900	68019967	(15237474)	C	tRNA-Arg-AGG	tRNA	(6)	70	3	1663342
1019	33.9	3.9	3.2	chr17	70365182	70365951	(12891490)	+	L2a	LINE/L2	2650	3419	(7)	1667193
13	0.0	9.1	0.0	chr17	72121153	72121174	(11136267)	+	(TCC)n	Simple_repeat	1	24	(0)	1669835
557	25.1	4.6	5.1	chr17	72420115	72420290	(10837151)	C	MIRc	SINE/MIR	(9)	259	85	1670361
934	13.6	2.8	0.0	chr17	74657747	74657886	(8599555)	+	FRAM	SINE/Alu	22	165	(11)	1674565
642	0.0	0.0	0.0	chr17	75033906	75033978	(8223463)	+	tRNA-Arg-AGG	tRNA	1	73	(3)	1675212
630	0.0	0.0	0.0	chr17	75034432	75034503	(8222938)	C	tRNA-Arg-AGG	tRNA	(4)	72	1	1675213
599	4.1	0.0	0.0	chr17	75035113	75035185	(8222256)	+	tRNA-Arg-CGG	tRNA	1	73	(3)	1675215
16	8.3	0.0	0.0	chr17	75182636	75182661	(8074780)	+	(GGGA)n	Simple_repeat	1	26	(0)	1675545
344	25.2	6.1	3.1	chr17	75296048	75296174	(7961267)	+	MIR3	SINE/MIR	76	206	(2)	1675791
2309	9.0	0.0	0.0	chr17	75775945	75776234	(7481207)	+	AluSc	SINE/Alu	2	291	(18)	1676749
2013	6.7	1.5	2.2	chr17	75905304	75905571	(7351870)	+	AluSc8	SINE/Alu	1	266	(45)	1676998
12	28.6	0.0	5.0	chr17	76353621	76353680	(6903761)	+	G-rich	Low_complexity	1	60	(0)	1677879
26	10.0	0.0	0.0	chr17	77107224	77107266	(6150175)	+	(CCAGGCT)n	Simple_repeat	1	43	(0)	1679464
386	25.8	7.1	0.2	chr17	77107272	77107409	(6150032)	C	MIRb	SINE/MIR	(75)	193	42	1679465
268	29.0	1.7	20.7	chr17	77441446	77441667	(5815774)	C	MIRc	SINE/MIR	(29)	239	61	1680049
18	14.2	0.0	3.0	chr17	77445526	77445558	(5811883)	+	(GT)n	Simple_repeat	1	33	(0)	1680058
1281	14.3	0.8	2.1	chr17	78276350	78276591	(4980850)	+	L1MB3	LINE/L1	5669	5907	(276)	1681547
12	18.5	7.8	1.8	chr17	78782045	78782095	(4475346)	+	(GCACCGC)n	Simple_repeat	1	55	(0)	1682446
2309	7.0	0.7	0.0	chr17	79697547	79697833	(3559608)	+	AluSx1	SINE/Alu	9	297	(15)	1683777
15	20.6	3.3	4.8	chr17	80146728	80146788	(3110653)	+	(GCCCGC)n	Simple_repeat	1	63	(0)	1684528
254	21.2	1.0	11.6	chr17	80258934	80259045	(2998396)	C	MER33	DNA/hAT-Charlie	(0)	324	225	1684768
366	15.1	0.0	0.0	chr17	80259047	80259099	(2998342)	C	AluSz6	SINE/Alu	(26)	286	234	1684769
417	14.8	0.0	11.4	chr17	80259100	80259185	(2998256)	C	LTR38A1	LTR/ERV1	(55)	488	406	1684770
12	22.6	4.2	2.0	chr17	81393862	81393909	(1863532)	+	(GGCC)n	Simple_repeat	1	50	(0)	1686225
13	24.8	4.2	0.0	chr17	81636936	81636983	(1620458)	+	(CTGCCTC)n	Simple_repeat	1	50	(0)	1686548
1203	7.5	0.0	0.0	chr17	81711642	81711827	(1545614)	C	AluSx	SINE/Alu	(0)	312	136	1686674
12	23.8	2.2	2.1	chr17	82065754	82065799	(1191642)	+	G-rich	Low_complexity	1	47	(0)	1687089
13	19.4	4.9	0.0	chr17	82065901	82065941	(1191500)	+	(AGAGGTC)n	Simple_repeat	1	43	(0)	1687090
21	21.1	0.0	0.0	chr17	82098063	82098111	(1159330)	+	(CCCCGG)n	Simple_repeat	1	49	(0)	1687135
13	20.1	5.0	0.0	chr17	82321578	82321617	(935824)	+	(GCC)n	Simple_repeat	1	42	(0)	1687482
16	23.6	0.0	0.0	chr17	82450409	82450443	(806998)	+	(CA)n	Simple_repeat	1	35	(0)	1687654
664	0.0	0.0	0.0	chr17	82494721	82494792	(762649)	C	tRNA-Met-i	tRNA	(3)	72	1	1687730
18	15.1	4.5	0.0	chr17	82519467	82519510	(737931)	+	(GCGCCC)n	Simple_repeat	1	46	(0)	1687801
26	27.5	3.3	3.2	chr18	158579	158698	(80214587)	+	(GCC)n	Simple_repeat	1	124	(0)	1689321
25	19.2	1.5	4.3	chr18	2312507	2312574	(78060711)	+	GA-rich	Low_complexity	1	69	(0)	1692490
2961	14.9	0.8	0.0	chr18	2312575	2313076	(78060209)	+	MER34B	LTR/ERV1	60	565	(0)	1692488
2646	22.0	7.0	3.4	chr18	2390627	2391691	(77981594)	+	L1ME1	LINE/L1	5131	6238	(114)	1692589
969	11.9	0.0	0.0	chr18	2391779	2391904	(77981381)	+	AluJb	SINE/Alu	1	126	(186)	1692594
710	29.8	5.6	3.6	chr18	3153214	3153460	(77219825)	+	MIRb	SINE/MIR	8	259	(9)	1693860
838	23.7	3.4	1.3	chr18	3178200	3178440	(77194845)	C	MIR	SINE/MIR	(20)	242	3	1693909
15	8.8	4.2	0.0	chr18	3526106	3526129	(76847156)	+	(GT)n	Simple_repeat	1	25	(0)	1694569
306	31.5	13.8	5.6	chr18	5295087	5295338	(75077947)	C	L1M4b	LINE/L1	(6188)	679	404	1697043
18	18.7	5.1	3.2	chr18	5295372	5295430	(75077855)	+	(CGG)n	Simple_repeat	1	62	(0)	1697044
29	23.8	1.7	5.9	chr18	9475572	9475687	(70897598)	+	(GGC)n	Simple_repeat	1	118	(0)	1703111
13	17.4	7.1	3.3	chr18	9913872	9913927	(70459358)	+	(GCGCAGC)n	Simple_repeat	1	60	(0)	1703863
15	20.9	1.6	6.3	chr18	9914178	9914239	(70459046)	+	(GCCGCC)n	Simple_repeat	1	63	(0)	1703864
20	3.0	2.6	5.1	chr18	12884216	12884253	(67489032)	+	(GCGCTGC)n	Simple_repeat	1	39	(0)	1708294
15	19.1	5.9	3.7	chr18	12884254	12884266	(67489019)	+	(GC)n	Simple_repeat	1	54	(0)	1708295
298	38.0	0.0	0.0	chr18	13606766	13606894	(66766391)	C	MER131	DNA?	(73)	142	14	1709286
587	23.9	7.4	1.9	chr18	13607165	13607369	(66765916)	+	MIR	SINE/MIR	36	252	(10)	1709287
2023	13.8	11.9	1.1	chr18	22872876	22873256	(57500029)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1715137
14	25.4	1.9	1.9	chr18	23503490	23503542	(56869743)	+	(AGCCGC)n	Simple_repeat	1	54	(0)	1716343
15	20.0	3.6	3.5	chr18	24014646	24014700	(56358585)	+	(CCGCGG)n	Simple_repeat	1	57	(0)	1717217
26	0.0	0.0	0.0	chr18	24014742	24014766	(56358519)	+	(CTCCC)n	Simple_repeat	1	25	(0)	1717218
307	31.7	6.4	6.1	chr18	27240358	27240538	(53132747)	C	L2b	LINE/L2	(49)	3377	3217	1722146
303	34.9	3.0	0.9	chr18	27240578	27240760	(53132525)	C	Plat_L3	LINE/CR1	(520)	3066	2899	1722147
744	27.9	4.8	3.7	chr18	31774120	31774446	(48598839)	C	MER46C	DNA/TcMar-Tigger	(0)	338	8	1728182
753	28.3	5.5	2.1	chr18	31791573	31791854	(48581431)	C	MamRep605	LTR?	(117)	732	441	1728211
3016	19.2	6.5	1.2	chr18	35971355	35972182	(44401103)	+	L1MB5	LINE/L1	5258	6174	(0)	1734073
18	0.0	0.0	0.0	chr18	44709813	44709832	(35663453)	+	(T)n	Simple_repeat	1	20	(0)	1745855
194	21.2	0.0	0.0	chr18	45197635	45197667	(35175618)	C	MER131	DNA?	(151)	64	32	1746563
17	18.8	1.2	9.8	chr18	47749224	47749304	(32623981)	+	(CGCCCCG)n	Simple_repeat	1	82	(0)	1750733
784	29.7	9.4	3.1	chr18	47901692	47902187	(32471098)	C	L1MEg2	LINE/L1	(5642)	810	321	1750971
220	21.9	0.0	0.0	chr18	48008702	48008742	(32364543)	+	L2c	LINE/L2	3344	3384	(3)	1751165
329	24.2	10.0	3.9	chr18	49788871	49788973	(30584312)	+	MIR3	SINE/MIR	42	151	(57)	1754209
26360	15.2	2.8	2.7	chr18	50333584	50334805	(30038480)	C	MER83A-int	LTR/ERV1	(4)	4281	3060	1754978
2209	14.0	11.7	2.1	chr18	50334806	50335191	(30038094)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1754979
1724	27.0	8.1	6.6	chr18	51953473	51954262	(28419023)	+	PABL_B-int	LTR/ERV1	1	803	(983)	1757736
230	35.9	0.0	2.5	chr18	56532380	56532459	(23840826)	C	MIRc	SINE/MIR	(36)	232	155	1764231
730	30.1	2.7	2.2	chr18	56532467	56532690	(23840595)	C	MIRb	SINE/MIR	(31)	237	13	1764232
12	16.6	0.0	0.0	chr18	57586769	57586795	(22786490)	+	(GCCGG)n	Simple_repeat	1	27	(0)	1765779
209	33.7	2.1	0.0	chr18	58658227	58658321	(21714964)	+	X7A_LINE	LINE/CR1	41	137	(130)	1767611
723	18.4	2.2	10.9	chr18	58658350	58658485	(21714800)	C	MER5A	DNA/hAT-Charlie	(5)	184	58	1767612
2374	9.9	0.0	0.3	chr18	58658486	58658789	(21714496)	C	AluSz	SINE/Alu	(9)	303	1	1767613
1816	10.0	6.9	0.4	chr18	59904554	59904812	(20468473)	C	AluSz6	SINE/Alu	(13)	299	23	1769760
1506	12.3	3.1	12.0	chr18	62652254	62652419	(17720866)	C	AluSz6	SINE/Alu	(17)	295	130	1773795
4317	17.8	3.1	2.9	chr18	70193762	70194979	(10178306)	+	L1MB4	LINE/L1	4962	6180	(0)	1784187
20	14.9	0.0	6.0	chr18	70288985	70289034	(10084251)	+	GA-rich	Low_complexity	1	50	(0)	1784348
799	17.7	4.3	1.9	chr18	79678792	79678949	(694336)	C	AluJo	SINE/Alu	(121)	191	30	1795686
32	0.0	0.0	0.0	chr19	267223	267252	(58350364)	+	(CGCTG)n	Simple_repeat	1	30	(0)	1796658
2112	12.3	0.0	1.7	chr19	951854	952154	(57665462)	+	AluSx	SINE/Alu	1	296	(16)	1797959
1009	0.0	0.0	0.0	chr19	1021522	1021628	(57595988)	+	U6	snRNA	1	107	(0)	1798081
1291	12.2	0.0	1.1	chr19	1076848	1077027	(57540589)	C	AluJr4	SINE/Alu	(133)	179	2	1798189
24	14.8	1.9	1.8	chr19	1275563	1275616	(57342000)	+	(TGCTGC)n	Simple_repeat	1	55	(0)	1798487
671	1.4	0.0	0.0	chr19	1383362	1383434	(57234182)	C	tRNA-Phe-TTY	tRNA	(3)	73	1	1798705
689	0.0	0.0	0.0	chr19	1383563	1383637	(57233979)	+	tRNA-Asn-AAC	tRNA	1	75	(2)	1798706
13	8.8	0.0	3.9	chr19	1407748	1407773	(57209843)	+	(CGC)n	Simple_repeat	1	26	(0)	1798749
17	24.4	1.9	0.0	chr19	1407835	1407887	(57209729)	+	(CCCCGCC)n	Simple_repeat	1	54	(0)	1798750
11	18.4	6.7	2.1	chr19	1445279	1445323	(57172293)	+	(CCGCCCA)n	Simple_repeat	1	48	(0)	1798790
16	19.3	0.0	4.4	chr19	1848420	1848464	(56769152)	+	(CGC)n	Simple_repeat	1	45	(0)	1799618
847	24.8	12.4	7.2	chr19	1904289	1904647	(56712969)	+	LTR38B	LTR/ERV1	171	556	(0)	1799728
23	24.6	2.7	2.6	chr19	1905578	1905652	(56711964)	+	(CG)n	Simple_repeat	1	77	(0)	1799732
11	22.4	6.6	3.1	chr19	2050970	2051030	(56566586)	+	(GGAGCGC)n	Simple_repeat	1	65	(0)	1800036
2507	6.6	0.3	0.0	chr19	2085685	2085986	(56531630)	+	AluY	SINE/Alu	2	304	(7)	1800119
21	19.8	0.0	0.0	chr19	2163757	2163802	(56453814)	+	(CGTG)n	Simple_repeat	1	46	(0)	1800272
17	27.5	1.3	4.0	chr19	2163789	2163863	(56453753)	+	G-rich	Low_complexity	1	76	(0)	1800273
308	26.4	1.1	2.1	chr19	2171410	2171502	(56446114)	+	MER20	DNA/hAT-Charlie	1	92	(127)	1800294
2265	9.5	1.9	3.2	chr19	2610326	2610641	(56006975)	C	AluSx1	SINE/Alu	(0)	312	1	1801236
2007	11.7	0.0	1.8	chr19	2610642	2610760	(56006856)	C	AluJo	SINE/Alu	(175)	137	21	1801235
369	29.6	2.3	0.0	chr19	2962110	2962234	(55655382)	+	L1ME1	LINE/L1	6039	6166	(13)	1802025
24	16.1	6.5	0.0	chr19	3185963	3186024	(55431592)	+	(CCG)n	Simple_repeat	1	66	(0)	1802594
1597	14.2	1.4	12.3	chr19	4109444	4109775	(54507841)	C	AluJr	SINE/Alu	(17)	295	1	1804766
24	25.9	9.0	1.7	chr19	4123955	4124120	(54493496)	+	(CGAGGC)n	Simple_repeat	1	181	(0)	1804793
18	24.6	2.6	3.8	chr19	4400443	4400519	(54217097)	+	(CGCCTC)n	Simple_repeat	1	79	(0)	1805509
23	26.0	1.3	1.3	chr19	4400558	4400634	(54216982)	+	(CGCCCG)n	Simple_repeat	1	77	(0)	1805510
646	1.4	0.0	0.0	chr19	4724070	4724141	(53893475)	+	tRNA-Gly-GGA	tRNA	1	72	(3)	1806264
1937	7.9	0.3	12.5	chr19	4724169	4724496	(53893120)	C	AluSx	SINE/Alu	(14)	298	11	1806265
605	5.5	0.0	0.0	chr19	4724635	4724707	(53892909)	C	tRNA-Val-GTG	tRNA	(3)	73	1	1806266
315	31.2	7.8	1.0	chr19	4851623	4851933	(53765683)	C	L2	LINE/L2	(435)	2984	2651	1806670
1621	15.2	0.7	11.9	chr19	4863936	4864098	(53753518)	C	AluSz	SINE/Alu	(15)	297	135	1806707
62	0.0	0.0	0.0	chr19	4864099	4864151	(53753465)	+	(GT)n	Simple_repeat	1	53	(0)	1806708
2230	10.8	1.3	0.0	chr19	4864153	4864447	(53753169)	C	AluSx3	SINE/Alu	(12)	299	1	1806709
1659	17.7	1.7	3.9	chr19	6528464	6528768	(52088848)	+	AluJo	SINE/Alu	1	298	(14)	1810493
20	3.4	0.0	5.9	chr19	6531138	6531171	(52086445)	+	(GCT)n	Simple_repeat	1	34	(0)	1810499
235	8.7	9.8	0.0	chr19	6536464	6536509	(52081107)	+	MADE1	DNA/TcMar-Mariner	30	80	(0)	1810506
1365	20.2	8.6	6.9	chr19	6536507	6536753	(52080863)	C	MLT1C	LTR/ERVL-MaLR	(2)	465	199	1810507
3802	5.2	0.0	1.1	chr19	6578115	6578583	(52039033)	C	L1PA8	LINE/L1	(2)	6170	5707	1810620
76	25.8	6.9	3.0	chr19	6670921	6671329	(51946287)	+	(TGTGCA)n	Simple_repeat	1	424	(0)	1810871
22	30.0	2.2	1.1	chr19	7294260	7294288	(51323328)	+	G-rich	Low_complexity	1	54	(39)	1812537
14	14.7	0.0	7.0	chr19	7294289	7294331	(51323285)	+	(GGCGGCG)n	Simple_repeat	1	43	(0)	1812538
22	30.0	2.2	1.1	chr19	7294332	7294350	(51323266)	+	G-rich	Low_complexity	55	93	(0)	1812537
14	15.8	2.7	2.6	chr19	7294486	7294522	(51323094)	+	(CCGC)n	Simple_repeat	1	38	(0)	1812539
407	24.8	0.3	8.8	chr19	7337585	7337753	(51279863)	+	MIR	SINE/MIR	69	215	(47)	1812680
285	18.3	28.5	3.0	chr19	7772777	7772902	(50844714)	C	L1MD3	LINE/L1	(595)	7400	7243	1813691
3360	17.6	4.2	3.5	chr19	7772904	7773169	(50844447)	C	MER50	LTR/ERV1	(42)	692	429	1813692
659	28.0	9.5	2.9	chr19	8308608	8308853	(50308763)	+	L2a	LINE/L2	3163	3426	(0)	1814980
743	23.9	7.4	3.4	chr19	10100607	10100840	(48516776)	C	L2a	LINE/L2	(0)	3426	3183	1818904
350	15.4	0.0	0.6	chr19	10100847	10100914	(48516702)	+	FLAM_C	SINE/Alu	1	54	(79)	1818905
263	0.0	0.0	0.0	chr19	10100914	10100945	(48516671)	+	Alu	SINE/Alu	21	52	(81)	1818906
2191	10.1	0.0	0.0	chr19	10100947	10101222	(48516394)	+	AluSz6	SINE/Alu	21	296	(16)	1818907
255	32.3	5.7	2.0	chr19	10270728	10270828	(48346788)	+	MIR	SINE/MIR	117	221	(41)	1819334
192	27.4	1.9	0.0	chr19	10271594	10271644	(48345972)	+	MIR	SINE/MIR	121	172	(90)	1819336
52	2.1	0.0	0.0	chr19	10404178	10404226	(48213390)	+	(CA)n	Simple_repeat	1	49	(0)	1819650
14	15.7	5.5	5.2	chr19	10430936	10430990	(48186626)	+	(CCGCGCCG)n	Simple_repeat	1	58	(0)	1819721
480	25.0	0.9	0.0	chr19	10604587	10604690	(48012926)	+	MIRb	SINE/MIR	40	144	(124)	1820228
459	24.8	0.8	2.3	chr19	12052320	12052449	(46565167)	+	MER57E3	LTR/ERV1	360	487	(0)	1823660
753	16.0	7.0	8.2	chr19	12671994	12672182	(45945434)	C	Tigger2a	DNA/TcMar-Tigger	(241)	193	2	1824963
982	17.3	0.0	1.8	chr19	12696841	12697008	(45920608)	+	AluJr	SINE/Alu	137	301	(11)	1825026
13	18.3	2.6	2.5	chr19	12957099	12957137	(45660479)	+	(CCGCGG)n	Simple_repeat	1	40	(0)	1825617
804	26.5	11.2	0.4	chr19	13260959	13261189	(45356427)	+	MER46C	DNA/TcMar-Tigger	80	338	(0)	1826282
15	5.6	0.0	0.0	chr19	14031559	14031577	(44586039)	+	(GT)n	Simple_repeat	1	19	(0)	1828390
15	8.7	0.0	10.9	chr19	14073548	14073593	(44544023)	+	(CGCGCCC)n	Simple_repeat	1	46	(0)	1828505
13	18.5	4.3	4.1	chr19	14073621	14073667	(44543949)	+	(GGC)n	Simple_repeat	1	49	(0)	1828506
535	28.4	3.5	4.0	chr19	14089470	14089704	(44527912)	C	MIR	SINE/MIR	(0)	262	35	1828545
16	30.9	1.4	1.4	chr19	15380240	15380308	(43237308)	+	(GGC)n	Simple_repeat	1	70	(0)	1831698
17	14.2	0.0	0.0	chr19	15380373	15380403	(43237213)	+	(CCT)n	Simple_repeat	1	31	(0)	1831699
13	18.3	5.4	0.0	chr19	15432769	15432805	(43184811)	+	(GCC)n	Simple_repeat	1	39	(0)	1831784
13	25.8	2.2	0.0	chr19	16076660	16076705	(42540911)	+	(AGCGCG)n	Simple_repeat	1	47	(0)	1833071
295	13.5	0.0	18.7	chr19	16079270	16079360	(42538256)	+	L1MB7	LINE/L1	6011	6084	(100)	1833075
290	25.2	2.9	0.0	chr19	16628871	16628969	(41988647)	C	MER20	DNA/hAT-Charlie	(3)	216	115	1834294
3161	22.9	7.6	1.2	chr19	17064040	17065259	(41552357)	+	L1ME1	LINE/L1	4286	5590	(589)	1835414
291	20.3	0.0	2.8	chr19	17065261	17065331	(41552285)	+	MER21A	LTR/ERVL	6	74	(857)	1835415
13	24.4	2.2	2.1	chr19	17235853	17235898	(41381718)	+	(CCG)n	Simple_repeat	1	47	(0)	1835810
15	23.9	4.0	0.0	chr19	17245669	17245718	(41371898)	+	G-rich	Low_complexity	1	52	(0)	1835831
29	11.5	1.7	3.3	chr19	17245941	17246000	(41371616)	+	G-rich	Low_complexity	1	61	(0)	1835832
199	13.9	12.2	0.0	chr19	17306083	17306125	(41311491)	C	MIRc	SINE/MIR	(136)	132	84	1835990
201	29.2	18.8	2.3	chr19	17739230	17739362	(40878254)	C	L2b	LINE/L2	(181)	3194	3035	1837146
14	15.8	0.0	5.1	chr19	17739548	17739586	(40878030)	+	G-rich	Low_complexity	1	39	(0)	1837147
31	27.6	2.7	0.9	chr19	18153180	18153289	(40464327)	+	(GGC)n	Simple_repeat	1	113	(0)	1838227
19	15.9	2.2	2.2	chr19	18161433	18161477	(40456139)	+	(GCC)n	Simple_repeat	1	46	(0)	1838245
17	20.2	1.6	6.2	chr19	18161493	18161556	(40456060)	+	G-rich	Low_complexity	1	65	(0)	1838246
12	25.0	6.3	1.5	chr19	18280608	18280670	(40336946)	+	(TGCGCT)n	Simple_repeat	1	67	(0)	1838527
311	26.9	6.3	2.5	chr19	18282357	18282478	(40335138)	C	MIR3	SINE/MIR	(52)	156	30	1838531
196	15.6	0.0	0.0	chr19	18340441	18340472	(40277144)	C	MIR1_Amn	SINE/MIR	(76)	154	123	1838667
20	24.7	1.8	0.0	chr19	18419440	18419496	(40198120)	+	(GCC)n	Simple_repeat	1	58	(0)	1838870
25	26.8	2.9	2.8	chr19	18831937	18832039	(39785577)	+	(CGG)n	Simple_repeat	1	106	(0)	1839691
16	22.7	3.0	4.3	chr19	18832095	18832161	(39785455)	+	(CCGCGG)n	Simple_repeat	1	69	(0)	1839692
20	23.8	1.6	1.6	chr19	19033444	19033504	(39584112)	+	(CCG)n	Simple_repeat	1	62	(0)	1840112
24	23.2	2.3	7.6	chr19	19385915	19385974	(39231642)	+	(CGCCGC)n	Simple_repeat	1	67	(55)	1840892
12	4.7	4.5	0.0	chr19	19385975	19385996	(39231620)	+	(GTCG)n	Simple_repeat	1	23	(0)	1840893
24	23.2	2.3	7.6	chr19	19385997	19386043	(39231573)	+	(CGCCGC)n	Simple_repeat	68	122	(0)	1840892
11	21.2	2.5	2.4	chr19	19386089	19386128	(39231488)	+	(CGCCGGC)n	Simple_repeat	1	41	(0)	1840894
17	4.0	0.0	3.6	chr19	29694704	29694731	(28922885)	+	(GGCCT)n	Simple_repeat	1	28	(0)	1850651
13	21.4	3.9	3.7	chr19	32405916	32405967	(26211649)	+	(GGCG)n	Simple_repeat	1	54	(0)	1854737
13	14.1	3.0	2.9	chr19	32692046	32692078	(25925538)	+	(CCG)n	Simple_repeat	1	34	(0)	1855320
687	1.3	0.0	0.0	chr19	33177057	33177131	(25440485)	+	tRNA-Thr-ACY	tRNA	1	75	(2)	1856355
36	2.5	2.4	0.0	chr19	34172434	34172474	(24445142)	+	(CGC)n	Simple_repeat	1	42	(0)	1858077
3695	19.6	2.7	5.3	chr19	35324144	35324478	(23293138)	C	L1MB8	LINE/L1	(5)	6564	6248	1860189
2234	9.0	0.7	0.3	chr19	35324479	35324766	(23292850)	+	AluSq	SINE/Alu	3	291	(22)	1860190
11	11.5	10.0	2.3	chr19	35995333	35995372	(22622244)	+	(GCGCCGAG)n	Simple_repeat	1	44	(0)	1861644
12	19.1	2.6	2.6	chr19	36009534	36009571	(22608045)	+	(GGCCGA)n	Simple_repeat	1	39	(0)	1861677
12	4.1	3.5	6.7	chr19	38402967	38402995	(20214621)	+	(GGGGC)n	Simple_repeat	1	30	(0)	1866578
586	31.3	13.2	0.6	chr19	38557237	38557586	(20060030)	C	L2a	LINE/L2	(1)	3425	3025	1866941
2404	10.1	0.3	0.0	chr19	38559226	38559533	(20058083)	C	AluSq2	SINE/Alu	(4)	309	1	1866948
1978	9.0	4.0	0.8	chr19	38857270	38857537	(19760079)	+	AluSq4	SINE/Alu	1	277	(34)	1867591
49	0.0	0.0	0.0	chr19	38857539	38857580	(19760036)	+	(CA)n	Simple_repeat	1	42	(0)	1867592
576	27.1	6.1	7.1	chr19	38857581	38857775	(19759841)	C	L2	LINE/L2	(389)	3030	2831	1867590
17	27.4	2.2	5.3	chr19	39409702	39409793	(19207823)	+	G-rich	Low_complexity	1	94	(0)	1869013
1429	24.8	11.8	2.7	chr19	39410929	39411768	(19205848)	+	L2a	LINE/L2	2485	3426	(0)	1869014
554	1.3	0.0	20.2	chr19	39412167	39412260	(19205356)	C	tRNA-Ile-ATA	tRNA	(2)	75	1	1869015
330	31.7	13.1	5.1	chr19	40426326	40426521	(18191095)	+	MIRb	SINE/MIR	54	267	(1)	1871023
28	19.2	0.0	0.0	chr19	40605493	40605551	(18012065)	+	(GGCGGA)n	Simple_repeat	1	59	(0)	1871506
42	0.0	0.0	0.0	chr19	40634800	40634837	(17982779)	+	(CAT)n	Simple_repeat	1	38	(0)	1871567
15101	8.9	0.7	1.7	chr19	41552583	41553122	(17064494)	C	PABL_A-int	LTR/ERV1	(0)	5015	4489	1873582
344	33.2	15.1	0.5	chr19	41875511	41875879	(16741737)	C	L1ME3Cz	LINE/L1	(164)	833	402	1874100
17	9.4	5.9	5.6	chr19	42076164	42076214	(16541402)	+	(GCGAGA)n	Simple_repeat	1	54	(0)	1874520
230	27.6	9.5	5.4	chr19	42108883	42108993	(16508623)	+	L2b	LINE/L2	3258	3373	(2)	1874593
12	12.8	5.6	2.6	chr19	42325733	42325768	(16291848)	+	(GCTCCC)n	Simple_repeat	1	38	(0)	1875034
13	26.1	2.4	0.0	chr19	43619558	43619599	(14998017)	+	(CGG)n	Simple_repeat	1	43	(0)	1877255
183	32.7	5.6	3.8	chr19	43765460	43765564	(14852052)	+	MIR1_Amn	SINE/MIR	52	158	(72)	1877621
213	26.0	6.5	2.5	chr19	45883360	45883459	(12734157)	+	MIRc	SINE/MIR	60	166	(64)	1882485
26	0.0	0.0	0.0	chr19	47226328	47226352	(11391264)	+	(CCCTGG)n	Simple_repeat	1	25	(0)	1885597
7404	9.5	1.1	0.6	chr19	48259616	48260614	(10357002)	C	LTR13	LTR/ERVK	(0)	1007	4	1888303
391	33.1	5.3	0.0	chr19	48618825	48618966	(9998650)	+	MIR	SINE/MIR	2	151	(111)	1889229
40	0.0	0.0	0.0	chr19	49158585	49158621	(9458995)	+	(TTCA)n	Simple_repeat	1	37	(0)	1890487
2221	12.0	0.0	0.3	chr19	49452714	49453021	(9164595)	C	AluSx	SINE/Alu	(5)	307	1	1891124
13	15.4	2.5	4.9	chr19	49534118	49534157	(9083459)	+	G-rich	Low_complexity	1	41	(0)	1891317
12	19.3	0.0	5.1	chr19	49929309	49929347	(8688269)	+	(CCCGCTC)n	Simple_repeat	1	39	(0)	1892228
12	17.3	10.0	3.9	chr19	50325680	50325749	(8291867)	+	(GGCGCGC)n	Simple_repeat	1	77	(0)	1893278
3803	12.8	8.4	4.9	chr19	50341007	50341155	(8276461)	+	LTR8A	LTR/ERV1	602	727	(0)	1893294
409	24.2	0.0	6.9	chr19	50341325	50341426	(8276190)	C	MER58B	DNA/hAT-Charlie	(48)	293	199	1893296
3028	14.9	1.3	4.4	chr19	51441614	51442180	(7175436)	+	LTR43B	LTR/ERV1	24	572	(0)	1895636
16	0.0	0.0	0.0	chr19	55634771	55634788	(2982828)	+	(T)n	Simple_repeat	1	18	(0)	1904202
13	23.2	0.0	2.4	chr19	55655318	55655359	(2962257)	+	G-rich	Low_complexity	1	42	(0)	1904237
15	10.4	3.0	2.9	chr19	55675287	55675319	(2942297)	+	(GGC)n	Simple_repeat	1	34	(0)	1904272
12	25.8	0.0	0.0	chr19	55675311	55675347	(2942269)	+	(GCGT)n	Simple_repeat	1	37	(0)	1904273
275	29.0	4.8	1.0	chr19	55678214	55678314	(2939302)	C	MIRb	SINE/MIR	(116)	152	48	1904284
201	25.3	11.8	2.6	chr19	55678410	55678486	(2939130)	C	L2c	LINE/L2	(482)	2937	2853	1904283
238	31.0	15.5	0.6	chr19	58519001	58519159	(98457)	+	L2	LINE/L2	2650	2836	(583)	1909663
268	31.6	14.9	0.0	chr2	7722107	7722220	(234471309)	+	MIR3	SINE/MIR	56	189	(19)	1920320
3586	20.0	6.0	0.3	chr2	7722284	7722971	(234470558)	C	MER44C	DNA/TcMar-Tigger	(0)	733	4	1920321
414	31.7	3.8	3.4	chr2	8469985	8470222	(233723307)	C	MamRep605	LTR?	(204)	645	407	1921432
277	29.0	8.6	0.0	chr2	8515091	8515197	(233678332)	C	MIRb	SINE/MIR	(66)	202	86	1921500
13	16.6	2.2	6.4	chr2	9004038	9004083	(233189446)	+	G-rich	Low_complexity	1	47	(0)	1922160
16	20.5	0.0	0.0	chr2	10079921	10079959	(232113570)	+	G-rich	Low_complexity	1	39	(0)	1924129
2252	10.0	0.0	0.0	chr2	10082577	10082866	(232110663)	C	AluSx	SINE/Alu	(22)	290	1	1924136
16	25.3	7.0	0.0	chr2	10302815	10302885	(231890644)	+	(CGCCCCG)n	Simple_repeat	1	76	(0)	1924544
13	6.8	0.0	12.5	chr2	10302901	10302940	(231890589)	+	(GGC)n	Simple_repeat	1	40	(0)	1924545
17	18.1	0.0	7.0	chr2	10448011	10448067	(231745462)	+	(CCGCGGC)n	Simple_repeat	1	57	(0)	1924772
17	20.2	6.1	2.9	chr2	10812723	10812788	(231380741)	+	(CCG)n	Simple_repeat	1	70	(0)	1925522
526	25.2	17.9	3.6	chr2	11870854	11871206	(230322323)	+	MLT1I	LTR/ERVL-MaLR	3	409	(2)	1927389
331	35.4	10.7	3.6	chr2	14425030	14425281	(227768248)	C	LTR78B	LTR/ERV1	(417)	879	608	1931173
16	22.8	1.6	4.8	chr2	20224799	20224860	(221968669)	+	(CAGCGC)n	Simple_repeat	1	63	(0)	1939965
14	10.3	3.0	2.9	chr2	20651130	20651162	(221542367)	+	(CCCTG)n	Simple_repeat	1	34	(0)	1940695
13	17.4	0.0	2.9	chr2	24123807	24123840	(218069689)	+	G-rich	Low_complexity	1	34	(0)	1945548
1420	14.4	7.8	22.7	chr2	25483833	25484246	(216709283)	+	Tigger3a	DNA/TcMar-Tigger	1	347	(1)	1947992
1107	31.5	4.8	0.0	chr2	25514003	25514478	(216679051)	C	L2a	LINE/L2	(81)	3345	2845	1948051
261	29.7	16.9	0.0	chr2	25878942	25879069	(216314460)	C	MIRc	SINE/MIR	(113)	155	2	1948760
533	1.4	0.0	17.8	chr2	27050782	27050871	(215142658)	+	tRNA-Tyr-TAC	tRNA	1	74	(2)	1951107
577	6.8	0.0	0.0	chr2	27051214	27051287	(215142242)	+	tRNA-Ala-GCY	tRNA	1	74	(2)	1951108
33	0.0	0.0	0.0	chr2	27086722	27086752	(215106777)	+	(CGGGG)n	Simple_repeat	1	31	(0)	1951151
12	22.0	1.9	5.6	chr2	27380532	27380584	(214812945)	+	(CCGGCCT)n	Simple_repeat	1	54	(0)	1951697
14	9.3	0.0	0.0	chr2	27380692	27380714	(214812815)	+	(GCC)n	Simple_repeat	1	23	(0)	1951698
1384	17.7	14.1	4.0	chr2	27683331	27683678	(214509851)	C	MLT1B	LTR/ERVL-MaLR	(1)	389	1	1952256
1741	10.8	1.9	1.6	chr2	27683736	27683993	(214509536)	C	AluSx3	SINE/Alu	(10)	301	43	1952257
14	22.7	0.0	2.3	chr2	28392229	28392271	(213801258)	+	(CTCCCGG)n	Simple_repeat	1	43	(0)	1953483
18	8.6	5.1	2.4	chr2	30147841	30147879	(212045650)	+	(GCC)n	Simple_repeat	1	41	(0)	1956448
16	22.7	3.5	1.7	chr2	32011040	32011097	(210182432)	+	(GGCGCAG)n	Simple_repeat	1	60	(0)	1959290
22	23.4	1.6	1.6	chr2	32357248	32357347	(209836182)	+	(GGC)n	Simple_repeat	1	100	(0)	1960156
310	33.8	11.7	4.1	chr2	37196705	37197019	(204996510)	C	L1M4b	LINE/L1	(6274)	593	252	1967324
21	23.0	4.1	1.3	chr2	37671684	37671756	(204521773)	+	(GCGGC)n	Simple_repeat	1	76	(0)	1968080
13	24.4	0.0	4.3	chr2	38376977	38377023	(203816506)	+	G-rich	Low_complexity	1	47	(0)	1969097
2836	23.1	4.5	2.8	chr2	38653466	38654148	(203539381)	+	MER21C	LTR/ERVL	173	868	(70)	1969647
2216	12.2	0.0	0.3	chr2	38687428	38687730	(203505799)	+	AluSx1	SINE/Alu	1	302	(10)	1969731
245	25.6	11.0	0.8	chr2	42809687	42809808	(199383721)	C	Charlie8	DNA/hAT-Charlie	(2256)	172	37	1976360
563	0.0	0.0	20.4	chr2	42810536	42810628	(199382901)	+	tRNA-Ile-ATA	tRNA	1	74	(3)	1976362
197	36.9	11.6	1.2	chr2	43483067	43483151	(198710378)	C	MamRTE1	LINE/RTE-BovB	(3604)	208	114	1977569
29	5.6	0.0	0.0	chr2	44181929	44181965	(198011564)	+	(AGAATAA)n	Simple_repeat	1	37	(0)	1978751
3266	21.1	3.9	5.5	chr2	44249834	44250490	(197943039)	+	L1ME2z	LINE/L1	5665	6325	(119)	1978892
843	29.5	4.6	3.7	chr2	44250508	44250865	(197942664)	+	L1MB1	LINE/L1	47	411	(5989)	1978896
534	28.3	1.9	5.8	chr2	45975066	45975290	(196218239)	+	MIR	SINE/MIR	43	258	(4)	1981565
3676	9.5	12.9	12.0	chr2	47697116	47697434	(194496095)	+	LTR8A	LTR/ERV1	363	727	(0)	1984580
990	5.9	6.2	3.5	chr2	47697435	47697461	(194496068)	C	LTR49	LTR/ERV1	(365)	230	204	1984576
4700	4.0	0.0	2.5	chr2	47697467	47698038	(194495491)	C	LTR6B	LTR/ERV1	(0)	558	1	1984582
1312	16.5	8.9	0.3	chr2	54115032	54115329	(188078200)	+	L1MA9	LINE/L1	5982	6307	(5)	1993801
412	25.2	3.6	0.9	chr2	54571396	54571503	(187622026)	+	MER81	DNA/hAT-Blackjack	2	112	(2)	1994578
59	1.9	0.0	0.0	chr2	54571547	54571601	(187621928)	+	(AC)n	Simple_repeat	1	55	(0)	1994579
38	0.0	0.0	0.0	chr2	54673060	54673092	(187520437)	+	(GT)n	Simple_repeat	1	33	(0)	1994664
32	21.9	1.3	0.0	chr2	55050129	55050207	(187143322)	+	(TCCTCC)n	Simple_repeat	1	80	(0)	1995181
12	10.4	6.1	2.9	chr2	55419886	55419918	(186773611)	+	(CCCG)n	Simple_repeat	1	35	(0)	1995872
18	12.4	0.0	2.7	chr2	55420095	55420131	(186773398)	+	(GGCGCG)n	Simple_repeat	1	37	(0)	1995873
302	33.1	5.0	2.3	chr2	57549784	57549959	(184643570)	C	MamSINE1	SINE/tRNA-RTE	(24)	266	86	1998720
12	26.8	0.0	8.9	chr2	61065894	61065972	(181127557)	+	G-rich	Low_complexity	1	79	(0)	2003591
16	22.5	4.5	2.9	chr2	61177289	61177354	(181016175)	+	(CCCCG)n	Simple_repeat	1	69	(0)	2003841
2735	17.6	4.0	0.8	chr2	61443493	61443980	(180749549)	+	L1MC1	LINE/L1	5813	6316	(17)	2004324
13	21.0	4.5	0.0	chr2	61470531	61470574	(180722955)	+	(CCGCCCG)n	Simple_repeat	1	46	(0)	2004393
17	25.1	0.0	0.0	chr2	61538196	61538242	(180655287)	+	(GCTGCC)n	Simple_repeat	1	47	(0)	2004523
240	27.1	8.5	2.5	chr2	62084975	62085095	(180108434)	C	MIRc	SINE/MIR	(31)	237	109	2005814
2498	9.9	0.0	0.0	chr2	62085222	62085515	(180108014)	C	AluY	SINE/Alu	(16)	295	2	2005815
11	14.1	0.0	8.1	chr2	63050325	63050361	(179143168)	+	G-rich	Low_complexity	1	37	(0)	2007375
13	7.5	3.1	6.1	chr2	64019442	64019473	(178174056)	+	(GCCGG)n	Simple_repeat	1	33	(0)	2008683
17	18.1	5.8	1.8	chr2	64865705	64865779	(177327750)	+	(GGC)n	Simple_repeat	1	77	(0)	2010083
12	20.8	3.6	5.3	chr2	64918187	64918241	(177275288)	+	G-rich	Low_complexity	1	57	(0)	2010188
222	28.2	3.0	4.5	chr2	64932620	64932698	(177260831)	+	MER91C	DNA/hAT-Tip100	1	78	(112)	2010220
266	30.5	8.1	0.9	chr2	64932671	64932815	(177260714)	+	MIR3	SINE/MIR	57	205	(3)	2010221
233	32.4	11.2	6.3	chr2	68385451	68385975	(173807554)	+	L2c	LINE/L2	2804	3375	(12)	2015549
232	37.5	9.5	1.9	chr2	68423839	68424316	(173769213)	C	L2	LINE/L2	(1024)	2395	1878	2015589
23769	13.9	2.2	3.1	chr2	69790238	69792971	(172400558)	C	LTR25-int	LTR/ERV1	(1)	7187	4480	2017767
481	32.7	1.8	2.9	chr2	70141286	70141455	(172052074)	+	MIRb	SINE/MIR	78	245	(23)	2018485
335	21.9	15.9	3.1	chr2	70161220	70161385	(172032144)	+	MIRb	SINE/MIR	73	265	(3)	2018526
2319	10.0	0.3	0.0	chr2	70161560	70161859	(172031670)	+	AluSp	SINE/Alu	2	302	(11)	2018527
19	15.8	2.4	0.0	chr2	72917421	72917462	(169276067)	+	(CCCGC)n	Simple_repeat	1	43	(0)	2022809
879	17.0	3.7	1.6	chr2	75055743	75055927	(167137602)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	2026418
247	30.1	11.6	5.0	chr2	75055936	75056096	(167137433)	C	MER5B	DNA/hAT-Charlie	(0)	178	6	2026419
371	34.6	8.3	6.1	chr2	78977286	78977531	(163215998)	C	MIRb	SINE/MIR	(2)	266	15	2031711
792	17.9	1.9	0.6	chr2	80527332	80527488	(161666041)	C	MER5A	DNA/hAT-Charlie	(2)	187	29	2033902
273	28.2	9.7	2.2	chr2	80527536	80527669	(161665860)	+	MER5A	DNA/hAT-Charlie	45	189	(0)	2033903
201	24.7	4.3	11.9	chr2	84925970	84926070	(157267459)	C	MER91C	DNA/hAT-Tip100	(31)	109	17	2039689
565	28.6	1.0	9.9	chr2	84938570	84938677	(157254852)	C	L4_A_Mam	LINE/RTE-X	(290)	4700	4608	2039719
2341	8.0	3.2	0.3	chr2	84938862	84939162	(157254367)	C	AluSq2	SINE/Alu	(3)	310	1	2039721
17	24.4	1.0	8.2	chr2	86623345	86623440	(155570089)	+	G-rich	Low_complexity	1	97	(0)	2042943
284	26.3	8.3	2.2	chr2	86808329	86808464	(155385065)	C	MIR3	SINE/MIR	(8)	200	56	2043241
25	28.2	2.0	6.0	chr2	96760837	96760984	(145432545)	+	G-rich	Low_complexity	1	151	(0)	2052732
12	14.4	7.5	2.3	chr2	97995381	97995420	(144198109)	+	(CCCGG)n	Simple_repeat	1	43	(0)	2054371
232	33.3	0.0	2.9	chr2	98608073	98608174	(143585355)	C	MIRb	SINE/MIR	(77)	191	93	2055212
14	28.6	2.6	3.8	chr2	100417614	100417690	(141775839)	+	(CGCC)n	Simple_repeat	1	79	(0)	2057844
12	19.1	2.6	2.6	chr2	101308488	101308525	(140885004)	+	(GCCCGG)n	Simple_repeat	1	39	(0)	2059376
19	16.6	2.0	2.0	chr2	101697755	101697803	(140495726)	+	G-rich	Low_complexity	1	50	(0)	2060084
13	16.6	2.8	2.7	chr2	101697919	101697954	(140495575)	+	(CGC)n	Simple_repeat	1	37	(0)	2060085
529	20.0	7.4	1.7	chr2	102020845	102021022	(140172507)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	2060515
306	36.5	5.8	1.9	chr2	102107886	102108100	(140085429)	+	MIRc	SINE/MIR	45	268	(0)	2060651
24	8.7	0.0	0.0	chr2	109213779	109213815	(132979714)	+	(TGTGG)n	Simple_repeat	1	37	(0)	2070447
316	32.9	11.6	0.7	chr2	111115738	111116013	(131077516)	C	L3	LINE/CR1	(10)	4089	3780	2073123
13	15.2	2.5	4.9	chr2	112276066	112276105	(129917424)	+	(GGCGG)n	Simple_repeat	1	41	(0)	2074833
1445	21.8	3.4	0.6	chr2	112666781	112667094	(129526435)	+	Tigger6b	DNA/TcMar-Tigger	2	324	(1273)	2075507
363	27.6	7.3	9.0	chr2	112690842	112691064	(129502465)	C	MLT1N2	LTR/ERVL-MaLR	(90)	472	254	2075565
2763	4.4	0.0	0.0	chr2	121531314	121531609	(120661920)	+	AluYe5	SINE/Alu	1	296	(14)	2088813
344	28.9	8.0	0.7	chr2	122741654	122741807	(119451722)	+	MIR3	SINE/MIR	3	165	(43)	2090848
909	26.4	13.5	0.0	chr2	122884139	122884433	(119309096)	C	MER58B	DNA/hAT-Charlie	(0)	341	1	2091052
393	36.3	3.5	5.3	chr2	124875875	124876398	(117317131)	C	MLT1K	LTR/ERVL-MaLR	(42)	553	40	2093851
52	29.5	0.7	0.0	chr2	124981179	124981330	(117212199)	+	(TG)n	Simple_repeat	1	153	(0)	2094019
209	33.8	5.6	8.1	chr2	124981410	124981667	(117211862)	+	L2c	LINE/L2	3132	3382	(5)	2094020
19	17.5	3.6	3.5	chr2	127858082	127858137	(114335392)	+	(CGC)n	Simple_repeat	1	58	(0)	2098144
14	0.0	7.4	3.5	chr2	128027098	128027124	(114166405)	+	(CCGC)n	Simple_repeat	1	29	(0)	2098506
14	24.6	5.1	1.6	chr2	128027166	128027224	(114166305)	+	(CGG)n	Simple_repeat	1	62	(0)	2098507
307	21.9	0.0	0.0	chr2	130337127	130337199	(111856330)	C	tRNA-Glu-GAG_	tRNA	(2)	73	1	2101680
14	17.2	3.0	0.0	chr2	134120135	134120167	(108073362)	+	(CGG)n	Simple_repeat	1	34	(0)	2106959
13	19.6	2.2	4.3	chr2	134120194	134120238	(108073291)	+	(CGCGCCT)n	Simple_repeat	1	46	(0)	2106960
234	32.8	17.8	0.6	chr2	134283148	134283328	(107910201)	+	MIRb	SINE/MIR	42	260	(8)	2107204
2287	14.9	5.3	3.6	chr2	135874818	135875089	(106318440)	+	L1MB3	LINE/L1	5790	6058	(125)	2109770
2138	9.1	2.4	0.0	chr2	135875090	135875376	(106318153)	+	AluSp	SINE/Alu	2	295	(18)	2109772
655	23.0	10.4	5.9	chr2	138475091	138475363	(103718166)	+	MLT2C1	LTR/ERVL	107	393	(4)	2113488
355	27.3	3.6	3.6	chr2	138475397	138475533	(103717996)	+	HAL1	LINE/L1	1709	1845	(662)	2113489
534	22.0	0.0	0.8	chr2	144374263	144374395	(97819134)	C	UCON80	DNA/hAT?	(0)	142	11	2121342
15	0.0	0.0	0.0	chr2	144517172	144517190	(97676339)	+	(CGC)n	Simple_repeat	1	19	(0)	2121496
17	9.4	5.7	0.0	chr2	147844537	147844571	(94348958)	+	(GAGCCCG)n	Simple_repeat	1	37	(0)	2125792
36	19.1	3.3	1.1	chr2	147844582	147844672	(94348857)	+	(GCC)n	Simple_repeat	1	94	(0)	2125793
15	24.1	1.4	6.8	chr2	151828341	151828412	(90365117)	+	(GCC)n	Simple_repeat	1	73	(0)	2131422
657	1.4	0.0	0.0	chr2	156401147	156401217	(85792312)	C	tRNA-Gly-GGY	tRNA	(3)	71	1	2137396
257	38.6	12.6	4.0	chr2	161077255	161078097	(81115432)	C	L2	LINE/L2	(1668)	1751	818	2143932
1514	17.8	1.1	0.0	chr2	161141049	161141317	(81052212)	C	L1MB5	LINE/L1	(0)	7034	6763	2144027
23554	7.6	1.5	0.3	chr2	161141324	161145133	(81048396)	C	L1PA8	LINE/L1	(1)	6486	2638	2144028
18	28.4	2.7	1.3	chr2	162318495	162318568	(79874961)	+	(GGCA)n	Simple_repeat	1	76	(0)	2145557
13	13.1	13.3	1.5	chr2	169824904	169824963	(72368566)	+	(GCGCGCAC)n	Simple_repeat	1	68	(0)	2155676
1981	16.8	2.4	1.9	chr2	170212521	170212933	(71980596)	C	MER61C	LTR/ERV1	(0)	428	14	2156288
307	19.0	2.5	6.0	chr2	170212956	170213039	(71980490)	C	Charlie4z	DNA/hAT-Charlie	(34)	133	53	2156290
2680	12.7	5.2	3.6	chr2	170213173	170213647	(71979882)	C	LTR2B	LTR/ERV1	(0)	483	1	2156291
12	9.8	0.0	11.9	chr2	170771318	170771359	(71422170)	+	(GGCCCCG)n	Simple_repeat	1	42	(0)	2157213
15	27.3	5.2	3.9	chr2	171160560	171160656	(71032873)	+	G-rich	Low_complexity	1	102	(0)	2157911
16	22.6	1.8	3.6	chr2	171160827	171160881	(71032648)	+	(CGG)n	Simple_repeat	1	56	(0)	2157912
19	25.0	1.2	5.8	chr2	173963715	173963799	(68229730)	+	(GGCGGC)n	Simple_repeat	1	86	(0)	2162453
13	18.5	2.6	2.5	chr2	174682243	174682281	(67511248)	+	G-rich	Low_complexity	1	40	(0)	2163676
30	17.0	4.0	1.3	chr2	177264625	177264698	(64928831)	+	(CGG)n	Simple_repeat	1	77	(0)	2167361
26	24.9	0.0	4.5	chr2	179264569	179264659	(62928870)	+	(GGC)n	Simple_repeat	1	86	(0)	2169919
16	26.1	3.4	0.0	chr2	186590241	186590299	(55603230)	+	G-rich	Low_complexity	1	61	(0)	2179278
17	3.2	5.9	2.8	chr2	189784481	189784514	(52409015)	+	(GCGGGT)n	Simple_repeat	1	36	(0)	2183366
19	18.4	4.5	4.3	chr2	190408282	190408366	(51785163)	+	(CCTCG)n	Simple_repeat	1	85	(0)	2184332
19	17.3	9.2	0.0	chr2	190408395	190408476	(51785053)	+	(CCGGCGCC)n	Simple_repeat	1	89	(0)	2184333
28	3.3	0.0	0.0	chr2	190534906	190534936	(51658593)	+	(CGGCCT)n	Simple_repeat	1	31	(0)	2184502
17	23.9	2.0	0.0	chr2	190648836	190648885	(51544644)	+	(GCCCCC)n	Simple_repeat	1	51	(0)	2184672
543	35.8	7.9	3.2	chr2	190680096	190680630	(51512899)	+	L2b	LINE/L2	2723	3374	(1)	2184712
13	0.0	0.0	0.0	chr2	197804607	197804623	(44388906)	+	(GCC)n	Simple_repeat	1	17	(0)	2194616
12	21.8	5.3	3.3	chr2	200509853	200509909	(41683620)	+	(GCCCGA)n	Simple_repeat	1	60	(0)	2198446
11	27.6	1.0	9.1	chr2	200509910	200509948	(41683581)	+	(CGGCCCG)n	Simple_repeat	3	99	(0)	2198447
20	11.8	0.0	2.6	chr2	200510168	200510206	(41683323)	+	(GCCAC)n	Simple_repeat	1	39	(0)	2198448
322	25.0	5.7	0.0	chr2	200889152	200889251	(41304278)	C	MER94	DNA/hAT-Blackjack	(6)	128	23	2199071
17	23.1	0.0	3.7	chr2	201116576	201116629	(41076900)	+	(GCCCC)n	Simple_repeat	1	54	(0)	2199569
11	19.5	2.1	6.2	chr2	201451779	201451825	(40741704)	+	(GCCCCGC)n	Simple_repeat	1	48	(0)	2200074
15	10.9	4.4	6.4	chr2	206085808	206085852	(36107677)	+	(GCCC)n	Simple_repeat	1	47	(0)	2207944
919	27.8	14.3	6.6	chr2	207723964	207724602	(34468927)	C	L4_C_Mam	LINE/RTE-X	(783)	4355	3659	2210573
11209	15.4	7.0	3.2	chr2	208293816	208295269	(33898260)	C	L1MC1	LINE/L1	(5032)	1476	3	2211653
2480	9.1	1.4	0.0	chr2	210912636	210912985	(31280544)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	2214923
7680	20.0	6.6	3.3	chr2	210912986	210913453	(31280076)	+	L1MC3	LINE/L1	7471	7948	(12)	2214916
1616	17.4	5.8	0.4	chr2	215811427	215811701	(26381828)	C	AluJr	SINE/Alu	(21)	291	1	2221679
4376	18.8	2.9	2.4	chr2	215811708	215812650	(26380879)	+	ERV24B_Prim-int	LTR/ERV1	313	1259	(6354)	2221678
13	18.2	2.6	2.5	chr2	216013476	216013514	(26180015)	+	G-rich	Low_complexity	1	40	(0)	2221993
297	30.7	1.1	0.0	chr2	216057645	216057732	(26135797)	+	MLT1K	LTR/ERVL-MaLR	24	112	(483)	2222095
1724	16.0	0.4	1.4	chr2	216222476	216222756	(25970773)	+	AluJo	SINE/Alu	11	288	(24)	2222356
1972	14.5	5.4	2.4	chr2	216417297	216417671	(25775858)	C	MLT1B	LTR/ERVL-MaLR	(2)	388	2	2222717
363	30.6	9.4	2.0	chr2	217218775	217218970	(24974559)	C	MIRb	SINE/MIR	(38)	230	7	2224082
568	10.0	0.0	0.0	chr2	217222663	217222742	(24970787)	C	MADE1	DNA/TcMar-Mariner	(0)	80	1	2224087
13	21.2	0.0	6.1	chr2	218880643	218880691	(23312838)	+	(CCCCAGC)n	Simple_repeat	1	49	(0)	2226967
14	16.4	2.9	0.0	chr2	219176946	219176979	(23016550)	+	(CGCCCT)n	Simple_repeat	1	35	(0)	2227458
12	12.6	2.5	7.3	chr2	219294869	219294908	(22898621)	+	(AGGCCC)n	Simple_repeat	1	41	(0)	2227663
12	20.9	0.0	7.8	chr2	223837325	223837375	(18356154)	+	(GGCCC)n	Simple_repeat	1	51	(0)	2234958
36	2.7	0.0	0.0	chr2	224585163	224585200	(17608329)	+	(GCG)n	Simple_repeat	1	38	(0)	2236169
13	5.3	0.0	0.0	chr2	224585308	224585327	(17608202)	+	(GGC)n	Simple_repeat	1	20	(0)	2236170
22	9.4	0.0	0.0	chr2	224585356	224585389	(17608140)	+	(TCC)n	Simple_repeat	1	34	(0)	2236171
428	29.9	0.8	1.7	chr2	225271023	225271141	(16922388)	+	LTR16C	LTR/ERVL	147	264	(225)	2237252
997	22.8	7.8	0.0	chr2	227460347	227460570	(14732959)	+	MIR	SINE/MIR	3	245	(17)	2240549
13	5.3	0.0	0.0	chr2	227472177	227472196	(14721333)	+	(GGC)n	Simple_repeat	1	20	(0)	2240577
3525	9.5	3.2	1.0	chr2	227805691	227806180	(14387349)	C	LTR2C	LTR/ERV1	(0)	501	1	2241169
413	30.6	24.0	6.2	chr2	229822168	229822494	(12371035)	+	L1MEg	LINE/L1	413	802	(5650)	2244133
978	30.8	6.3	5.5	chr2	229822493	229823298	(12370231)	+	L1MEg	LINE/L1	1854	2666	(4884)	2244133
16	21.9	1.2	8.5	chr2	230411968	230412048	(11781481)	+	G-rich	Low_complexity	1	82	(0)	2245094
13	12.5	0.0	3.6	chr2	230668224	230668251	(11525278)	+	(CCA)n	Simple_repeat	1	28	(0)	2245482
297	24.7	3.1	1.1	chr2	230984459	230984552	(11208977)	C	MLT1C	LTR/ERVL-MaLR	(371)	96	1	2246015
13	0.0	5.0	0.0	chr2	230985188	230985207	(11208322)	+	(AGGG)n	Simple_repeat	1	21	(0)	2246018
190	25.0	1.9	5.5	chr2	230985300	230985354	(11208175)	+	AmnSINE2	SINE/tRNA-Deu	131	183	(175)	2246019
37	20.0	4.1	0.0	chr2	231604662	231604758	(10588771)	+	(CCGGC)n	Simple_repeat	1	101	(0)	2247244
12	18.3	5.4	0.0	chr2	231708162	231708198	(10485331)	+	G-rich	Low_complexity	1	39	(0)	2247478
2252	15.4	5.8	2.2	chr2	237057879	237058101	(5135428)	+	MSTA	LTR/ERVL-MaLR	194	427	(1)	2255888
643	27.0	13.3	2.0	chr2	237058160	237058465	(5135064)	+	LTR16B2	LTR/ERVL	108	453	(9)	2255890
18	19.3	2.4	9.2	chr2	238158997	238159081	(4034448)	+	(CCG)n	Simple_repeat	1	87	(0)	2257432
12	15.9	5.7	0.0	chr2	238159212	238159246	(4034283)	+	(CGCCCG)n	Simple_repeat	1	37	(0)	2257433
17	15.7	4.7	0.0	chr2	238289204	238289246	(3904283)	+	(CGGCCAG)n	Simple_repeat	1	45	(0)	2257600
25	13.2	3.9	0.0	chr2	238289266	238289316	(3904213)	+	(TTCA)n	Simple_repeat	1	53	(0)	2257601
11	24.3	4.0	1.9	chr2	241102477	241102526	(1091003)	+	(GCCGCA)n	Simple_repeat	1	52	(0)	2260683
2129	11.5	0.3	0.7	chr2	241305128	241305422	(888107)	C	AluSx	SINE/Alu	(18)	294	1	2260950
501	21.4	6.4	0.0	chr2	241305504	241305620	(887909)	C	MER20	DNA/hAT-Charlie	(0)	219	95	2260951
16	15.3	2.0	6.0	chr2	241356235	241356283	(837246)	+	G-rich	Low_complexity	1	50	(0)	2261023
12	21.8	2.7	0.0	chr20	325406	325442	(64118725)	+	(GCCCGA)n	Simple_repeat	1	38	(0)	2262664
14	14.0	4.9	2.3	chr20	325566	325606	(64118561)	+	(GCGGCGGA)n	Simple_repeat	1	43	(0)	2262665
13	18.4	5.7	3.6	chr20	462515	462567	(63981600)	+	(CCGCGGC)n	Simple_repeat	1	56	(0)	2262991
14	35.9	0.0	0.0	chr20	653096	653162	(63791005)	+	(GCCCG)n	Simple_repeat	1	67	(0)	2263435
13	14.8	4.0	10.4	chr20	653483	653556	(63790611)	+	G-rich	Low_complexity	1	77	(0)	2263436
16	14.2	0.0	0.0	chr20	653539	653569	(63790598)	+	(GCGGGG)n	Simple_repeat	1	31	(0)	2263437
1197	23.7	3.8	1.7	chr20	1523881	1524241	(62919926)	C	L1MC5a	LINE/L1	(154)	2623	2255	2265162
340	25.3	2.2	0.0	chr20	1524245	1524331	(62919836)	+	LTR16C	LTR/ERVL	280	368	(121)	2265163
581	31.4	1.9	0.0	chr20	1850746	1850952	(62593215)	C	MER103C	DNA/hAT-Charlie	(45)	252	42	2265736
564	9.3	22.4	0.0	chr20	2524794	2524890	(61919277)	C	FLAM_C	SINE/Alu	(15)	128	4	2267111
26	29.4	1.2	0.0	chr20	4823230	4823314	(59620853)	+	(GCGCCCT)n	Simple_repeat	1	86	(0)	2271387
18	13.7	2.4	2.3	chr20	4823488	4823529	(59620638)	+	(CCCT)n	Simple_repeat	1	43	(0)	2271388
999	17.6	0.0	4.5	chr20	5078151	5078328	(59365839)	+	MER45A	DNA/hAT-Tip100	8	177	(1)	2271960
672	25.5	5.9	0.0	chr20	5078473	5078768	(59365399)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	52	2271961
1879	11.8	6.6	0.0	chr20	5650772	5651041	(58793126)	C	AluSg	SINE/Alu	(13)	297	9	2272954
2151	28.4	6.5	8.8	chr20	5842470	5843780	(58600387)	C	L1MEd	LINE/L1	(1025)	1440	36	2273415
27	40.8	1.1	0.6	chr20	6766985	6767163	(57677004)	+	(ATAT)n	Simple_repeat	1	181	(0)	2274929
560	26.4	0.0	0.0	chr20	6940125	6940268	(57503899)	C	MER91B	DNA/hAT-Tip100	(35)	155	12	2275196
17	17.8	1.7	6.8	chr20	17968482	17968539	(46475628)	+	(GCC)n	Simple_repeat	1	59	(0)	2291818
634	25.0	10.5	3.9	chr20	19915124	19915545	(44528622)	C	LTR16C	LTR/ERVL	(7)	482	1	2294867
223	33.6	8.7	0.8	chr20	19945108	19945224	(44498943)	C	MIRc	SINE/MIR	(124)	144	18	2294922
46	2.2	0.0	0.0	chr20	32277699	32277744	(32166423)	+	(CGC)n	Simple_repeat	1	46	(0)	2308087
12	24.6	0.0	2.5	chr20	32762485	32762524	(31681643)	+	G-rich	Low_complexity	1	40	(0)	2309236
521	20.7	3.9	20.5	chr20	33401624	33401937	(31042230)	+	MER33	DNA/hAT-Charlie	14	267	(57)	2310618
15	32.0	3.4	2.2	chr20	33993917	33994005	(30450162)	+	(GCG)n	Simple_repeat	1	92	(0)	2312095
16	0.0	4.3	0.0	chr20	35284937	35284959	(29159208)	+	(TTCA)n	Simple_repeat	1	24	(0)	2314939
1848	4.8	0.0	1.7	chr20	35447050	35447281	(28996886)	C	L1PA5	LINE/L1	(0)	6154	5927	2315295
302	5.4	0.0	0.0	chr20	35447283	35447319	(28996848)	+	L1PA5	LINE/L1	5912	5948	(206)	2315295
22	20.9	4.0	2.6	chr20	35772088	35772164	(28672003)	+	(GGCCG)n	Simple_repeat	1	78	(0)	2316009
12	21.9	2.2	4.3	chr20	35772191	35772236	(28671931)	+	(CCCGG)n	Simple_repeat	1	47	(0)	2316010
2338	7.6	0.7	1.0	chr20	36595534	36595834	(27848333)	+	AluSz	SINE/Alu	1	300	(12)	2317971
12	17.6	5.0	2.4	chr20	36605904	36605943	(27838224)	+	(GGCCC)n	Simple_repeat	1	42	(0)	2318000
20	13.4	0.0	4.4	chr20	36863794	36863838	(27580329)	+	GA-rich	Low_complexity	1	45	(0)	2318641
14	10.5	6.5	0.0	chr20	36863902	36863932	(27580235)	+	(CCT)n	Simple_repeat	1	33	(0)	2318642
554	23.7	20.3	0.0	chr20	41133753	41133929	(23310238)	+	MIR	SINE/MIR	20	241	(21)	2327091
185	21.7	6.1	0.0	chr20	41133906	41133951	(23310216)	C	MIR	SINE/MIR	(21)	241	193	2327092
1309	25.3	9.2	9.4	chr20	43438407	43438605	(21005562)	+	LTR16C	LTR/ERVL	1	195	(294)	2331161
2505	10.5	27.9	0.0	chr20	43438606	43439062	(21005105)	+	MER51A	LTR/ERV1	1	634	(0)	2331162
17	8.1	7.3	2.3	chr20	44531882	44531922	(19912245)	+	G-rich	Low_complexity	1	44	(0)	2333726
218	39.0	5.0	3.4	chr20	44587074	44587251	(19856916)	C	L2c	LINE/L2	(7)	3380	3200	2333859
1298	24.7	5.7	1.6	chr20	44652277	44652712	(19791455)	+	L1ME3F	LINE/L1	5631	6085	(158)	2333995
22	10.4	0.0	0.0	chr20	47350321	47350352	(17093815)	+	(A)n	Simple_repeat	1	32	(0)	2339802
15	0.0	0.0	0.0	chr20	47350454	47350470	(17093697)	+	(TG)n	Simple_repeat	1	17	(0)	2339803
15	21.7	0.0	0.0	chr20	47350471	47350489	(17093678)	+	(TTTGTG)n	Simple_repeat	3	38	(0)	2339804
354	28.9	16.7	1.6	chr20	47415419	47415601	(17028566)	+	L2	LINE/L2	2822	3037	(382)	2339992
517	27.1	5.8	10.9	chr20	47493838	47494088	(16950079)	C	MIR	SINE/MIR	(1)	261	25	2340265
20	19.0	0.0	6.6	chr20	47501914	47501974	(16942193)	+	(GCG)n	Simple_repeat	1	61	(0)	2340296
16	18.3	2.2	2.2	chr20	47502034	47502078	(16942089)	+	(AGGCGG)n	Simple_repeat	1	46	(0)	2340297
380	20.6	4.5	0.1	chr20	47711230	47711323	(16732844)	+	MIR	SINE/MIR	1	97	(171)	2340688
496	23.6	0.7	5.3	chr20	49611315	49611466	(14832701)	C	MER20	DNA/hAT-Charlie	(59)	160	16	2344884
1956	14.6	1.3	3.0	chr20	49630225	49630526	(14813641)	+	AluJb	SINE/Alu	1	297	(15)	2344938
217	26.5	11.7	0.0	chr20	49630681	49630763	(14813404)	+	MIR	SINE/MIR	8	101	(161)	2344939
14	15.4	1.6	9.7	chr20	49713638	49713698	(14730469)	+	(GCGGCA)n	Simple_repeat	1	62	(0)	2345095
39	23.3	1.5	4.5	chr20	49713734	49713864	(14730303)	+	(CCG)n	Simple_repeat	1	133	(0)	2345096
14	22.7	1.8	5.2	chr20	50113046	50113102	(14331065)	+	(CCCCGG)n	Simple_repeat	1	58	(0)	2346105
14	10.3	2.9	5.6	chr20	50153672	50153706	(14290461)	+	(GGC)n	Simple_repeat	1	36	(0)	2346210
618	29.6	3.7	2.7	chr20	50461074	50461292	(13982875)	+	MIRb	SINE/MIR	36	250	(12)	2346998
335	29.8	11.2	7.1	chr20	50794681	50794850	(13649317)	C	MER5B	DNA/hAT-Charlie	(0)	178	1	2347757
253	36.3	1.6	0.8	chr20	51400744	51400903	(13043264)	C	MIRb	SINE/MIR	(77)	191	29	2349056
438	27.3	12.8	1.0	chr20	53622510	53622716	(10821451)	C	MIRc	SINE/MIR	(8)	260	26	2353883
2169	10.2	0.3	2.9	chr20	53686329	53686641	(10757526)	+	AluSc5	SINE/Alu	1	305	(4)	2354068
424	32.2	3.2	2.0	chr20	53708451	53708602	(10735565)	+	MIRb	SINE/MIR	108	261	(7)	2354133
2486	17.9	0.2	8.8	chr20	53708657	53708709	(10735458)	C	L1MB3	LINE/L1	(2)	6181	6143	2354134
572	24.8	10.5	6.8	chr20	53729641	53729951	(10714216)	+	MLT1H	LTR/ERVL-MaLR	226	549	(0)	2354197
36	7.2	0.0	0.0	chr20	53735956	53735999	(10708168)	+	(TC)n	Simple_repeat	1	44	(0)	2354219
187	29.1	13.4	0.0	chr20	53750818	53750920	(10693247)	C	MIR	SINE/MIR	(136)	126	8	2354258
19	7.3	3.5	0.0	chr20	53751106	53751134	(10693033)	+	(AC)n	Simple_repeat	1	30	(0)	2354259
13	13.2	0.0	0.0	chr20	53754169	53754193	(10689974)	+	(TAA)n	Simple_repeat	1	25	(0)	2354264
707	20.1	0.0	6.9	chr20	53754198	53754357	(10689810)	C	MIR	SINE/MIR	(24)	238	90	2354265
2014	17.2	9.8	1.7	chr20	53814915	53815317	(10628850)	+	LTR51	LTR/ERV1	1	439	(232)	2354429
31	3.3	0.0	0.0	chr20	53834308	53834338	(10609829)	+	(CT)n	Simple_repeat	1	31	(0)	2354466
472	19.2	0.0	0.0	chr20	53872562	53872660	(10571507)	+	L1MB8	LINE/L1	6079	6177	(1)	2354553
16	15.6	7.8	0.0	chr20	53872661	53872699	(10571468)	+	GA-rich	Low_complexity	1	42	(0)	2354554
39	0.0	2.7	0.0	chr20	53872753	53872789	(10571378)	+	(GT)n	Simple_repeat	1	38	(0)	2354555
483	25.5	9.7	2.0	chr20	53893506	53893705	(10550462)	C	MER113	DNA/hAT-Charlie	(0)	521	305	2354604
708	24.9	10.6	6.8	chr20	53899230	53899609	(10544558)	C	LTR16A1	LTR/ERVL	(9)	447	52	2354621
15	13.8	2.9	2.8	chr20	53922417	53922451	(10521716)	+	(TCC)n	Simple_repeat	1	36	(0)	2354675
2358	11.3	0.0	0.0	chr20	53922567	53922875	(10521292)	+	AluSz	SINE/Alu	1	309	(3)	2354676
20	14.9	4.8	0.0	chr20	54017891	54017939	(10426228)	+	A-rich	Low_complexity	1	51	(0)	2354865
262	30.6	12.9	3.2	chr20	54018170	54018385	(10425782)	+	L2a	LINE/L2	3187	3426	(0)	2354866
480	29.3	4.2	3.9	chr20	54199388	54199621	(10244546)	C	L2b	LINE/L2	(228)	3147	2913	2355248
408	31.1	10.2	2.8	chr20	57619627	57619808	(6824359)	+	MIRb	SINE/MIR	52	248	(20)	2361494
304	34.6	0.0	2.7	chr20	57680200	57680309	(6763858)	C	MIRb	SINE/MIR	(46)	222	116	2361582
997	17.7	6.5	2.4	chr20	57680329	57680536	(6763631)	+	MER20	DNA/hAT-Charlie	3	219	(0)	2361583
17	18.6	4.4	5.6	chr20	58889254	58889321	(5554846)	+	(GGC)n	Simple_repeat	1	71	(0)	2363578
13	15.9	2.7	2.6	chr20	58890745	58890781	(5553386)	+	(CCACCG)n	Simple_repeat	1	38	(0)	2363582
301	30.2	11.2	0.5	chr20	59004622	59004837	(5439330)	C	L2a	LINE/L2	(1764)	1655	1414	2363798
21	3.6	0.0	0.0	chr20	62926247	62926275	(1517892)	+	(CCCG)n	Simple_repeat	1	29	(0)	2369100
11	21.8	0.0	4.9	chr20	63009088	63009128	(1435039)	+	G-rich	Low_complexity	1	41	(0)	2369184
328	27.1	3.7	1.5	chr20	63730789	63730919	(713248)	+	Charlie18a	DNA/hAT-Charlie	165	298	(44)	2369955
57	0.0	0.0	0.0	chr20	63730923	63730971	(713196)	+	(TC)n	Simple_repeat	1	49	(0)	2369956
18	0.0	0.0	0.0	chr20	63730972	63730991	(713176)	+	(GT)n	Simple_repeat	1	20	(0)	2369957
2298	9.7	0.0	1.0	chr20	63864482	63864792	(579375)	+	AluSq2	SINE/Alu	6	313	(0)	2370148
15	4.1	0.0	6.9	chr20	64063098	64063126	(381041)	+	(GCGG)n	Simple_repeat	1	29	(0)	2370474
238	30.1	5.7	8.9	chr21	14787546	14787691	(31922292)	C	MLT1I	LTR/ERVL-MaLR	(19)	392	252	2378298
405	30.4	23.5	1.7	chr21	15018290	15018644	(31691339)	C	L2a	LINE/L2	(41)	3385	2930	2378562
16	11.7	0.0	0.0	chr21	15064946	15064973	(31645010)	+	(CGC)n	Simple_repeat	1	28	(0)	2378615
657	29.6	16.2	4.2	chr21	25298337	25298794	(21411189)	+	LTR79	LTR/ERVL	1	524	(3)	2392302
182	32.7	0.0	0.0	chr21	25298934	25298985	(21410998)	+	MIRc	SINE/MIR	175	226	(42)	2392303
440	18.7	6.8	3.1	chr21	32930048	32930174	(13779809)	+	L1ME4a	LINE/L1	5981	6112	(12)	2404018
249	22.0	5.7	0.0	chr21	33079329	33079378	(13630605)	C	L2c	LINE/L2	(0)	3387	3335	2404264
1727	16.2	0.3	1.3	chr21	33383610	33383910	(13326073)	C	L1MB5	LINE/L1	(8)	6166	5869	2404846
20	26.4	2.5	2.4	chr21	33588685	33588764	(13121219)	+	(CCCCCG)n	Simple_repeat	1	82	(0)	2405244
342	29.5	3.9	1.6	chr21	34020252	34020375	(12689608)	C	MIR	SINE/MIR	(134)	128	2	2406009
2777	15.3	1.9	0.6	chr21	36289756	36290222	(10419761)	+	L1MC1	LINE/L1	5857	6329	(4)	2409534
22	21.7	9.1	0.0	chr21	36321672	36321748	(10388235)	+	(TC)n	Simple_repeat	1	84	(0)	2409610
24	28.1	1.1	3.2	chr21	37073267	37073358	(9636625)	+	(CGG)n	Simple_repeat	1	93	(0)	2410977
18	18.4	2.3	0.0	chr21	39348737	39348779	(7361204)	+	(CGCC)n	Simple_repeat	1	44	(0)	2414409
15	22.4	4.9	3.1	chr21	39348838	39348898	(7361085)	+	(GCG)n	Simple_repeat	1	64	(0)	2414410
355	23.6	4.0	2.7	chr21	41361729	41361876	(5348107)	+	MER5A	DNA/hAT-Charlie	39	188	(1)	2417321
471	24.1	2.9	2.2	chr21	41420052	41420187	(5289796)	C	MER5A1	DNA/hAT-Charlie	(29)	137	1	2417418
23	13.0	0.0	0.0	chr21	41420268	41420309	(5289674)	+	(GCGGGC)n	Simple_repeat	1	42	(0)	2417419
1527	23.0	5.5	2.7	chr21	43353166	43353603	(3356380)	+	MLT1C	LTR/ERVL-MaLR	1	451	(16)	2420186
13	0.0	0.0	4.8	chr21	43659537	43659557	(3050426)	+	(CCG)n	Simple_repeat	1	21	(0)	2420580
419	16.5	8.1	2.6	chr21	43958234	43959528	(2750455)	+	(GT)n	Simple_repeat	1	1400	(0)	2421097
11	22.1	0.0	4.9	chr21	44939893	44939933	(1770050)	+	(CCGCGAC)n	Simple_repeat	1	41	(0)	2422349
822	22.0	15.3	2.9	chr22	17628986	17629083	(33189385)	C	L1MC3	LINE/L1	(340)	7655	7516	2429398
834	15.0	1.5	0.0	chr22	17629084	17629216	(33189252)	+	FLAM_C	SINE/Alu	1	135	(8)	2429399
1268	24.0	7.8	0.6	chr22	17777409	17777764	(33040704)	+	MLT1B	LTR/ERVL-MaLR	1	384	(6)	2429741
47	27.5	3.6	3.9	chr22	19431483	19431707	(31386761)	+	(GCC)n	Simple_repeat	1	233	(0)	2431996
13	18.3	2.6	2.5	chr22	19431815	19431853	(31386615)	+	G-rich	Low_complexity	1	40	(0)	2431997
17	11.7	5.8	5.5	chr22	19447536	19447587	(31370881)	+	(GGC)n	Simple_repeat	1	55	(0)	2432024
312	30.1	6.7	3.2	chr22	20017199	20017356	(30801112)	C	MIRb	SINE/MIR	(17)	251	88	2432796
16	15.8	0.0	2.7	chr22	21735482	21735518	(29082950)	+	(GCCC)n	Simple_repeat	1	37	(0)	2435784
15	17.2	2.0	5.8	chr22	21735618	21735668	(29082800)	+	(CGCCCCG)n	Simple_repeat	1	52	(0)	2435785
12	21.2	2.5	2.4	chr22	21867954	21867993	(28950475)	+	(GCGA)n	Simple_repeat	1	41	(0)	2436082
348	30.9	7.9	0.0	chr22	23069772	23069945	(27748523)	C	MIRb	SINE/MIR	(23)	245	50	2437725
2119	16.1	0.3	0.3	chr22	23138281	23138590	(27679878)	+	AluSz6	SINE/Alu	2	311	(1)	2437804
410	32.1	7.4	0.0	chr22	24434781	24434917	(26383551)	C	MIR3	SINE/MIR	(5)	203	56	2440019
237	26.4	8.3	2.4	chr22	25398463	25398586	(25419882)	C	MIR3	SINE/MIR	(26)	182	51	2442117
1828	14.1	2.4	0.3	chr22	25398773	25399063	(25419405)	+	AluJb	SINE/Alu	1	297	(15)	2442118
26	19.0	4.4	5.3	chr22	28773015	28773138	(22045330)	+	G-rich	Low_complexity	1	122	(0)	2449171
21	27.6	0.0	5.4	chr22	28800218	28800309	(22018159)	+	(CCCAGC)n	Simple_repeat	1	92	(0)	2449228
19	18.5	2.0	1.9	chr22	28800537	28800587	(22017881)	+	(CGCGC)n	Simple_repeat	1	52	(0)	2449229
355	23.7	2.1	0.0	chr22	29202846	29202938	(21615530)	+	MIRb	SINE/MIR	148	242	(26)	2450104
23	33.0	0.0	2.9	chr22	30969596	30969698	(19848770)	+	(CGG)n	Simple_repeat	1	103	(0)	2453683
256	27.2	3.2	7.1	chr22	35127079	35127177	(15691291)	C	MIRb	SINE/MIR	(66)	202	108	2462317
19	24.1	0.0	6.5	chr22	35127384	35127460	(15691008)	+	(TAAT)n	Simple_repeat	1	77	(0)	2462318
2010	18.8	0.3	0.0	chr22	36382939	36383247	(14435221)	+	AluJo	SINE/Alu	1	310	(2)	2464874
223	22.2	6.0	1.6	chr22	36383265	36383328	(14435140)	C	MIRc	SINE/MIR	(195)	73	7	2464875
16	9.5	5.9	0.0	chr22	36383495	36383528	(14434940)	+	(CAATCCA)n	Simple_repeat	1	36	(0)	2464876
14	4.0	7.7	0.0	chr22	36387753	36387778	(14430690)	+	(CCCG)n	Simple_repeat	1	28	(0)	2464883
12	14.4	7.5	2.3	chr22	37019521	37019560	(13798908)	+	(CGC)n	Simple_repeat	1	43	(0)	2466322
15	23.9	0.0	2.2	chr22	37019627	37019672	(13798796)	+	G-rich	Low_complexity	1	46	(0)	2466323
240	29.4	11.8	0.0	chr22	37538795	37538932	(13279536)	+	MIRb	SINE/MIR	80	243	(25)	2467472
15	18.1	0.0	0.0	chr22	37539055	37539086	(13279382)	+	GA-rich	Low_complexity	1	32	(0)	2467473
187	22.4	10.8	6.5	chr22	37539106	37539167	(13279301)	C	L2c	LINE/L2	(30)	3357	3293	2467474
297	6.1	5.8	0.0	chr22	38260357	38260405	(12558063)	+	MLT1D	LTR/ERVL-MaLR	439	490	(15)	2469123
190	34.9	1.6	0.0	chr22	38260407	38260469	(12557999)	C	MIR1_Amn	SINE/MIR	(82)	148	85	2469126
739	26.9	3.7	0.2	chr22	38260488	38260705	(12557763)	+	MIR	SINE/MIR	6	229	(33)	2469127
14	21.3	2.6	0.0	chr22	38272954	38272991	(12545477)	+	(CGC)n	Simple_repeat	1	39	(0)	2469147
15	23.5	1.9	1.9	chr22	38273101	38273152	(12545316)	+	(CCGCCCC)n	Simple_repeat	1	53	(0)	2469148
2433	8.1	0.0	0.0	chr22	39099891	39100187	(11718281)	+	AluSx1	SINE/Alu	1	297	(15)	2470876
2140	8.3	0.7	5.3	chr22	39442073	39442373	(11376095)	+	AluSx	SINE/Alu	1	287	(25)	2471657
1796	15.0	0.0	10.0	chr22	39442374	39442586	(11375882)	+	AluSz6	SINE/Alu	112	308	(4)	2471655
16	19.8	4.8	4.5	chr22	39521048	39521110	(11297358)	+	(GGC)n	Simple_repeat	1	66	(0)	2471816
589	28.3	27.1	3.8	chr22	39957245	39957663	(10860805)	+	L2a	LINE/L2	1329	1837	(1582)	2472592
1205	15.8	7.3	0.0	chr22	39961226	39961427	(10857041)	C	MER39	LTR/ERV1	(489)	218	1	2472596
382	34.4	9.7	3.1	chr22	40043850	40044071	(10774397)	+	MIRb	SINE/MIR	5	242	(26)	2472774
340	29.9	2.2	6.0	chr22	40241191	40241375	(10577093)	C	L1MC4	LINE/L1	(141)	7901	7724	2473195
1599	23.2	2.5	1.8	chr22	40241394	40241792	(10576676)	C	L1MC4	LINE/L1	(393)	7649	7248	2473195
293	28.9	7.1	4.3	chr22	40899002	40899164	(9919304)	C	MER21-int	LTR/ERVL	(3543)	648	481	2474588
2319	21.4	3.6	7.9	chr22	41859139	41859601	(8958867)	C	Tigger9b	DNA/TcMar-Tigger	(152)	472	5	2476945
224	24.2	8.1	3.2	chr22	41920511	41920604	(8897864)	C	MIRb	SINE/MIR	(60)	208	110	2477055
320	28.7	12.6	0.5	chr22	42419343	42419559	(8398909)	+	MER112	DNA/hAT-Charlie	15	261	(0)	2478011
8235	5.6	2.0	0.0	chr22	42551535	42552521	(8265947)	C	LTR13	LTR/ERVK	(0)	1007	1	2478356
1075	22.0	13.7	3.7	chr22	43187850	43188009	(7630459)	C	BLACKJACK	DNA/hAT-Blackjack	(740)	2229	2079	2479780
624	29.7	6.2	0.0	chr22	43263988	43264182	(7554286)	C	MER63A	DNA/hAT-Blackjack	(1)	209	2	2479898
325	34.8	4.8	0.6	chr22	46297583	46297761	(4520707)	+	L2a	LINE/L2	3236	3422	(4)	2485328
488	29.8	1.7	1.1	chr22	46297766	46297945	(4520523)	C	L1M5	LINE/L1	(2360)	3786	3606	2485329
544	38.2	9.5	3.1	chr22	46603815	46604340	(4214128)	C	L1MC	LINE/L1	(1011)	5135	4574	2485797
1249	22.7	3.3	0.3	chr22	46604382	46604704	(4213764)	C	L1MB3	LINE/L1	(7)	6176	5844	2485800
13	9.4	8.3	2.6	chr22	49936340	49936375	(882093)	+	(CGC)n	Simple_repeat	1	39	(0)	2489985
546	21.8	29.2	4.0	chr22	50342271	50342602	(475866)	C	LTR41	LTR/ERVL	(308)	460	5	2490487
276	28.2	7.8	6.6	chr3	4753809	4753960	(193541599)	C	MIRb	SINE/MIR	(36)	232	79	2499540
30	0.0	0.0	0.0	chr3	4831107	4831132	(193464427)	+	(TC)n	Simple_repeat	1	26	(0)	2499647
21	4.0	0.0	0.0	chr3	4831133	4831158	(193464401)	+	(AC)n	Simple_repeat	1	26	(0)	2499648
16	17.1	0.0	0.0	chr3	4831159	4831186	(193464373)	+	(CTCT)n	Simple_repeat	1	54	(0)	2499649
30	17.1	3.0	0.0	chr3	5122066	5122131	(193173428)	+	(AATG)n	Simple_repeat	1	68	(0)	2500268
1468	19.7	6.8	3.1	chr3	6717383	6717733	(191577826)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	2502650
394	24.6	7.2	2.7	chr3	9891094	9891239	(188404320)	+	MIRb	SINE/MIR	87	239	(29)	2508189
12	21.5	7.1	1.7	chr3	10248718	10248773	(188046786)	+	(CGGCGCC)n	Simple_repeat	1	60	(0)	2509045
465	24.8	8.1	4.5	chr3	13011360	13011570	(185283989)	C	MIRb	SINE/MIR	(17)	251	24	2514474
12	26.1	0.0	0.0	chr3	13419716	13419752	(184875807)	+	G-rich	Low_complexity	1	37	(0)	2515200
734	28.0	11.7	3.1	chr3	15361894	15362250	(182933309)	+	LTR16C	LTR/ERVL	132	537	(1)	2518668
4157	10.6	2.5	5.1	chr3	15398811	15399456	(182896103)	+	MER41B	LTR/ERV1	6	634	(0)	2518750
367	26.6	10.6	1.7	chr3	15647971	15648150	(182647409)	+	MLT1M	LTR/ERVL-MaLR	34	231	(441)	2519198
591	29.4	5.3	0.0	chr3	15769582	15769761	(182525798)	+	Tigger13a	DNA/TcMar-Tigger	22	211	(560)	2519378
3224	22.1	5.2	5.6	chr3	16510635	16511545	(181784014)	+	L1ME2z	LINE/L1	5511	6417	(27)	2520629
18	6.4	2.7	5.3	chr3	17742520	17742559	(180553000)	+	(TCC)n	Simple_repeat	1	38	(0)	2522304
14	16.2	0.0	0.0	chr3	19947408	19947435	(178348124)	+	(CGC)n	Simple_repeat	1	28	(0)	2525351
21	22.5	1.2	6.0	chr3	20040468	20040549	(178255010)	+	G-rich	Low_complexity	1	83	(0)	2525557
16	21.9	0.0	2.3	chr3	23806030	23806073	(174489486)	+	(CAG)n	Simple_repeat	1	44	(0)	2530811
21	23.0	5.9	2.2	chr3	23806111	23806195	(174489364)	+	(CCG)n	Simple_repeat	1	90	(0)	2530812
15	16.3	2.9	0.0	chr3	25665280	25665314	(172630245)	+	G-rich	Low_complexity	1	36	(0)	2533627
249	21.6	13.7	4.3	chr3	27454918	27455009	(170840550)	+	L1ME3G	LINE/L1	330	431	(493)	2536082
182	24.1	0.0	10.8	chr3	27455050	27455114	(170840445)	+	MIRc	SINE/MIR	67	124	(144)	2536083
544	27.8	10.8	7.3	chr3	27455117	27455570	(170839989)	+	L1ME3G	LINE/L1	438	909	(15)	2536082
26	6.1	0.0	0.0	chr3	27721915	27721948	(170573611)	+	(GCG)n	Simple_repeat	1	34	(0)	2536643
18	23.1	4.0	3.8	chr3	37452044	37452119	(160843440)	+	(CGC)n	Simple_repeat	1	79	(0)	2551605
306	27.1	9.5	0.8	chr3	39255848	39255981	(159039578)	C	MIRb	SINE/MIR	(29)	239	93	2554239
1589	22.4	9.2	5.4	chr3	42012034	42012833	(156282726)	C	L1MC4	LINE/L1	(0)	8042	7168	2558391
601	27.1	8.7	2.5	chr3	43907457	43907694	(154387865)	C	LTR81AB	LTR/Gypsy	(24)	254	1	2561354
230	26.5	10.6	4.8	chr3	43907695	43907915	(154387644)	C	MIRb	SINE/MIR	(10)	258	21	2561356
16	16.8	1.9	5.7	chr3	44510513	44510564	(153784995)	+	(CGCCCCG)n	Simple_repeat	1	53	(0)	2562222
2498	7.1	0.0	0.0	chr3	45037473	45037782	(153257777)	C	AluY	SINE/Alu	(0)	311	2	2563099
878	13.4	3.9	1.7	chr3	45038034	45038207	(153257352)	C	MER96B	DNA/hAT-Tip100	(239)	178	1	2563100
713	0.0	0.0	0.0	chr3	45688998	45689071	(152606488)	C	tRNA-Arg-CGY_	tRNA	(2)	74	1	2564290
1416	19.8	6.2	8.4	chr3	46095085	46095465	(152200094)	+	MLT1A	LTR/ERVL-MaLR	1	372	(2)	2564905
648	31.6	7.5	7.5	chr3	46095466	46095609	(152199950)	+	MLT1K	LTR/ERVL-MaLR	419	556	(39)	2564904
489	21.8	4.7	2.1	chr3	46488743	46488887	(151806672)	+	LTR41B	LTR/ERVL	19	167	(591)	2565464
14	23.0	1.8	5.3	chr3	46979798	46979853	(151315706)	+	(CGG)n	Simple_repeat	1	57	(0)	2566214
14	7.8	0.0	6.5	chr3	46979838	46979868	(151315691)	+	(GCCGG)n	Simple_repeat	1	31	(0)	2566215
31	16.1	2.4	9.4	chr3	46979917	46980041	(151315518)	+	(GCCCGC)n	Simple_repeat	1	128	(0)	2566216
29	13.9	0.0	3.4	chr3	47475821	47475879	(150819680)	+	(GCG)n	Simple_repeat	1	59	(0)	2567225
13	18.8	0.0	5.0	chr3	47475977	47476016	(150819543)	+	(CGCCCTG)n	Simple_repeat	1	40	(0)	2567226
12	22.4	0.0	2.6	chr3	47803441	47803478	(150492081)	+	G-rich	Low_complexity	1	38	(0)	2568028
13	8.5	0.0	3.7	chr3	48685810	48685836	(149609723)	+	(GGCAG)n	Simple_repeat	1	27	(0)	2569696
17	26.6	5.3	3.0	chr3	48685860	48685954	(149609605)	+	(CGCCG)n	Simple_repeat	1	100	(0)	2569697
15	14.9	2.6	2.5	chr3	48686065	48686103	(149609456)	+	(CCCCTCA)n	Simple_repeat	1	40	(0)	2569698
26	21.6	1.6	0.0	chr3	49093912	49093975	(149201584)	+	(CCG)n	Simple_repeat	1	65	(0)	2570661
19	13.0	0.0	0.0	chr3	51538798	51538831	(146756728)	+	(CCG)n	Simple_repeat	1	34	(0)	2574563
14	17.3	5.1	0.0	chr3	51538872	51538910	(146756649)	+	(CGGCG)n	Simple_repeat	1	41	(0)	2574564
365	29.3	3.1	0.8	chr3	52062595	52062718	(146232841)	C	MIRc	SINE/MIR	(49)	219	93	2575394
184	36.5	5.3	3.6	chr3	52062769	52062933	(146232626)	C	L2	LINE/L2	(3066)	353	186	2575395
813	4.6	6.9	0.9	chr3	52279087	52279195	(146016364)	C	AluSg	SINE/Alu	(152)	158	43	2575688
17	20.8	4.0	0.0	chr3	52685591	52685640	(145609919)	+	(CCGCC)n	Simple_repeat	1	52	(0)	2576289
28	27.3	4.0	2.3	chr3	52685752	52685875	(145609684)	+	(GCC)n	Simple_repeat	1	129	(0)	2576290
14	19.2	3.9	3.8	chr3	52705593	52705643	(145589916)	+	(GCCCC)n	Simple_repeat	1	53	(0)	2576322
578	30.7	1.4	3.6	chr3	53147783	53148005	(145147554)	+	MIR	SINE/MIR	29	246	(16)	2577088
16	17.4	3.4	6.6	chr3	53161340	53161398	(145134161)	+	(CGC)n	Simple_repeat	1	61	(0)	2577114
13	14.5	3.2	0.0	chr3	58008464	58008494	(140287065)	+	(CCCGCT)n	Simple_repeat	1	32	(0)	2585183
19	31.7	1.0	3.8	chr3	58237792	58237895	(140057664)	+	G-rich	Low_complexity	1	105	(0)	2585629
464	29.6	4.4	4.8	chr3	61637262	61637467	(136658092)	+	MIR	SINE/MIR	37	241	(21)	2590971
2792	23.0	6.2	7.7	chr3	61723593	61723949	(136571610)	C	L1MD1	LINE/L1	(11)	6231	5930	2591131
1972	12.1	5.7	0.7	chr3	61723950	61724231	(136571328)	+	AluSx1	SINE/Alu	1	297	(15)	2591132
29	0.0	0.0	0.0	chr3	63863798	63863824	(134431735)	+	(GCG)n	Simple_repeat	1	27	(0)	2594807
14	14.6	0.0	3.1	chr3	63912111	63912142	(134383417)	+	(CGGA)n	Simple_repeat	1	32	(0)	2594888
664	25.4	8.5	2.0	chr3	71985190	71985386	(126310173)	C	MIRb	SINE/MIR	(24)	244	34	2608220
548	34.7	2.3	1.8	chr3	72102001	72102220	(126193339)	C	MIR	SINE/MIR	(7)	255	35	2608470
1328	25.8	6.2	1.6	chr3	72102225	72102658	(126192901)	C	LTR16C	LTR/ERVL	(34)	455	1	2608471
618	22.4	0.7	2.7	chr3	72164162	72164308	(126131251)	+	MER5A	DNA/hAT-Charlie	3	146	(43)	2608608
1683	17.1	17.0	2.1	chr3	80993378	80993760	(117301799)	+	LTR47A	LTR/ERVL	1	452	(0)	2621462
273	28.3	10.7	8.1	chr3	81817022	81817194	(116478365)	+	LTR91	LTR/ERVL	22	199	(0)	2622613
257	34.3	2.9	0.0	chr3	82294150	82294248	(116001311)	+	MER135	DNA	77	178	(50)	2623221
4205	19.5	2.6	4.5	chr3	95237540	95238696	(103056863)	C	L1MB1	LINE/L1	(1)	6167	5044	2635236
467	32.8	4.5	5.2	chr3	95387577	95387865	(102907694)	C	L1M2	LINE/L1	(5852)	1644	1358	2635420
456	32.8	10.7	5.8	chr3	99418399	99418796	(98876763)	+	LTR105_Mam	LTR/ERVL	181	600	(0)	2640230
1134	34.2	9.4	1.7	chr3	100044182	100045173	(98250386)	C	L2b	LINE/L2	(1)	3374	2303	2641092
244	37.1	12.2	3.0	chr3	101938448	101939177	(96356382)	+	L2	LINE/L2	1661	2466	(953)	2643829
12034	15.4	2.1	2.3	chr3	106253081	106255986	(92039573)	+	L1PA16	LINE/L1	1868	4760	(2089)	2649283
1544	16.6	5.9	6.7	chr3	106255987	106256329	(92039230)	+	MER61A	LTR/ERV1	1	340	(1)	2649287
18	23.9	0.0	2.2	chr3	107522822	107522867	(90772692)	+	(TG)n	Simple_repeat	1	46	(0)	2651000
930	28.3	0.7	3.3	chr3	112676430	112676736	(85618823)	C	L2	LINE/L2	(410)	3009	2711	2658164
15	20.5	5.1	0.0	chr3	112676872	112676910	(85618649)	+	(AC)n	Simple_repeat	1	41	(0)	2658165
22	10.0	4.7	0.0	chr3	113838845	113838887	(84456672)	+	(GGTGC)n	Simple_repeat	1	45	(0)	2659865
21	11.7	0.0	0.0	chr3	113947695	113947731	(84347828)	+	(GGGGC)n	Simple_repeat	1	37	(0)	2660038
230	28.3	0.0	1.6	chr3	114327832	114327892	(83967667)	+	MIRc	SINE/MIR	2	61	(207)	2660621
182	34.1	2.9	9.0	chr3	114743886	114744030	(83551529)	C	MIR	SINE/MIR	(87)	175	40	2661134
308	28.5	15.9	3.1	chr3	118476801	118476963	(79818596)	+	MIR3	SINE/MIR	18	205	(3)	2666229
1232	14.7	13.6	1.4	chr3	119238503	119238785	(79056774)	+	MER44A	DNA/TcMar-Tigger	17	339	(0)	2667264
1187	27.9	10.6	3.1	chr3	121531193	121531749	(76763810)	C	L2a	LINE/L2	(173)	3253	2660	2670551
1320	32.6	12.4	2.1	chr3	122082057	122082921	(76212638)	C	L3	LINE/CR1	(11)	4088	3122	2671448
567	25.7	11.4	0.0	chr3	122617247	122617417	(75678142)	+	MIRb	SINE/MIR	6	198	(70)	2672333
13	18.2	0.0	0.0	chr3	122795234	122795264	(75500295)	+	G-rich	Low_complexity	1	31	(0)	2672621
15	17.6	0.0	0.0	chr3	122795282	122795313	(75500246)	+	(GGC)n	Simple_repeat	1	32	(0)	2672622
17	21.1	1.7	4.9	chr3	126475748	126475807	(71819752)	+	(GGCGG)n	Simple_repeat	1	61	(0)	2678640
13	14.1	4.7	4.4	chr3	127590416	127590458	(70705101)	+	(GCCCG)n	Simple_repeat	1	45	(0)	2680325
15	17.6	1.7	8.2	chr3	128153460	128153519	(70142040)	+	G-rich	Low_complexity	1	61	(0)	2681288
14	4.0	3.3	6.5	chr3	128153493	128153522	(70142037)	+	(GGC)n	Simple_repeat	1	31	(0)	2681289
19	35.7	0.0	2.0	chr3	129316101	129316199	(68979360)	+	(CCGGAG)n	Simple_repeat	1	99	(0)	2683539
11	27.7	0.0	0.0	chr3	132660552	132660590	(65634969)	+	(GGAGCG)n	Simple_repeat	1	39	(0)	2688747
12	25.0	4.3	0.0	chr3	133574289	133574335	(64721224)	+	G-rich	Low_complexity	1	49	(0)	2690192
33	29.1	1.0	0.0	chr3	134795373	134795487	(63500072)	+	(CA)n	Simple_repeat	1	116	(0)	2691964
13	9.8	9.1	0.0	chr3	136752057	136752089	(61543470)	+	(GCTC)n	Simple_repeat	1	36	(0)	2695003
12	17.1	2.9	2.8	chr3	138608976	138609010	(59686549)	+	(CGCC)n	Simple_repeat	1	36	(0)	2697787
581	27.9	7.3	6.6	chr3	140941197	140941468	(57354091)	C	L1ME3G	LINE/L1	(291)	633	360	2701539
12	21.0	3.6	5.3	chr3	141231886	141231940	(57063619)	+	G-rich	Low_complexity	1	57	(0)	2701980
12	31.9	3.2	0.0	chr3	142596364	142596425	(55699134)	+	G-rich	Low_complexity	1	64	(0)	2704384
2355	9.5	1.7	0.0	chr3	149602675	149602959	(48692600)	C	AluSz	SINE/Alu	(22)	290	1	2713891
185	26.2	9.7	3.7	chr3	149752626	149752732	(48542827)	C	L2a	LINE/L2	(6)	3420	3307	2714160
13	17.2	3.9	5.7	chr3	150762949	150762999	(47532560)	+	(CGCCCGG)n	Simple_repeat	1	53	(0)	2715807
14	7.2	0.0	8.6	chr3	153162083	153162117	(45133442)	+	(GCCCC)n	Simple_repeat	1	35	(0)	2719347
18	16.6	1.6	7.8	chr3	156817017	156817079	(41478480)	+	(GCG)n	Simple_repeat	1	64	(0)	2724606
443	29.6	3.6	1.2	chr3	157089356	157089516	(41206043)	C	MIR3	SINE/MIR	(5)	203	39	2724955
654	27.0	5.9	4.2	chr3	157089614	157089857	(41205702)	+	MIRb	SINE/MIR	5	253	(15)	2724956
328	18.4	0.0	0.0	chr3	159919967	159920015	(38375544)	C	AluJb	SINE/Alu	(182)	130	82	2728951
2352	20.0	7.3	9.8	chr3	159920016	159920559	(38375000)	+	L1MB4	LINE/L1	5565	6157	(23)	2728950
863	28.4	3.1	1.7	chr3	165459821	165460110	(32835449)	C	LTR16A1	LTR/ERVL	(4)	452	159	2736268
2675	17.3	3.6	3.6	chr3	165460160	165460711	(32834848)	+	MLT2B4	LTR/ERVL	1	552	(4)	2736269
737	33.0	4.4	6.3	chr3	165839609	165840006	(32455553)	C	MamRTE1	LINE/RTE-BovB	(268)	3544	3155	2736759
684	0.0	0.0	0.0	chr3	169772230	169772303	(28523256)	+	tRNA-Val-GTY	tRNA	1	74	(2)	2741787
19	0.0	0.0	0.0	chr3	169772317	169772337	(28523222)	+	(T)n	Simple_repeat	1	21	(0)	2741788
15	16.8	1.9	7.3	chr3	170356808	170356861	(27938698)	+	G-rich	Low_complexity	1	55	(0)	2742884
13	15.0	0.0	8.9	chr3	170357539	170357583	(27937976)	+	(CTCCC)n	Simple_repeat	1	45	(0)	2742889
12	15.8	0.0	3.3	chr3	170357586	170357615	(27937944)	+	(GGC)n	Simple_repeat	1	30	(0)	2742890
28	20.9	1.3	2.6	chr3	170357707	170357805	(27937754)	+	(GGC)n	Simple_repeat	1	97	(0)	2742891
314	31.5	8.4	10.8	chr3	172131899	172132314	(26163245)	C	L2c	LINE/L2	(1)	3386	2982	2745654
2087	12.5	2.8	0.0	chr3	172132419	172132697	(26162862)	C	AluSx1	SINE/Alu	(25)	287	1	2745655
1231	20.1	5.6	6.2	chr3	177144780	177145007	(21150552)	C	MER58B	DNA/hAT-Charlie	(117)	224	1	2752663
541	24.6	16.1	0.5	chr3	177145204	177145391	(21150168)	+	MER58A	DNA/hAT-Charlie	1	223	(1)	2752665
15	18.1	5.8	1.8	chr3	179322883	179322934	(18972625)	+	(GGCCGCG)n	Simple_repeat	1	55	(0)	2755995
12	18.0	5.0	2.4	chr3	179323212	179323251	(18972308)	+	(CCG)n	Simple_repeat	1	42	(0)	2755996
23	21.2	4.3	6.6	chr3	182980357	182980473	(15315086)	+	G-rich	Low_complexity	1	122	(0)	2761870
15	0.0	0.0	0.0	chr3	182980542	182980560	(15314999)	+	(CGG)n	Simple_repeat	1	19	(0)	2761871
2270	10.8	1.3	0.0	chr3	183161383	183161688	(15133871)	C	AluSx1	SINE/Alu	(2)	310	1	2762211
14	9.9	2.8	5.4	chr3	183527418	183527453	(14768106)	+	A-rich	Low_complexity	1	37	(0)	2762839
38	6.9	0.0	0.0	chr3	183527694	183527739	(14767820)	+	(GT)n	Simple_repeat	1	46	(0)	2762840
12	14.4	0.0	0.0	chr3	183636873	183636896	(14658663)	+	(GCC)n	Simple_repeat	1	24	(0)	2763074
304	34.5	2.7	7.8	chr3	186218075	186218222	(12077337)	+	MIR3	SINE/MIR	3	153	(55)	2767949
16	9.4	10.6	1.9	chr3	186783214	186783260	(11512299)	+	(CTCCGG)n	Simple_repeat	1	52	(0)	2768981
237	26.7	6.8	6.8	chr3	187000603	187000779	(11294780)	C	L1ME4c	LINE/L1	(246)	584	408	2769410
242	27.6	3.0	3.9	chr3	187000828	187000929	(11294630)	C	L1ME4c	LINE/L1	(538)	292	192	2769410
249	31.3	4.8	2.9	chr3	187027414	187027515	(11268044)	+	MER5A	DNA/hAT-Charlie	86	189	(0)	2769472
2188	12.3	1.0	0.0	chr3	189655347	189655646	(8639913)	+	AluSz6	SINE/Alu	5	307	(5)	2773892
798	29.8	9.0	4.6	chr3	189655647	189655866	(8639693)	+	L1MCa	LINE/L1	131	369	(5676)	2773891
1214	33.7	10.3	4.1	chr3	191295056	191296254	(6999305)	+	L2b	LINE/L2	1785	3099	(276)	2776324
30	8.2	0.0	0.0	chr3	191296255	191296293	(6999266)	+	(AC)n	Simple_repeat	1	39	(0)	2776326
306	34.1	8.5	11.7	chr3	191296294	191296610	(6998949)	+	L2b	LINE/L2	3100	3374	(1)	2776324
1151	19.3	5.5	2.2	chr3	192127797	192127984	(6167575)	+	MER33	DNA/hAT-Charlie	133	324	(0)	2777447
12	12.6	0.0	3.6	chr3	192918099	192918126	(5377433)	+	(CTGCC)n	Simple_repeat	1	28	(0)	2778682
19	21.1	3.5	6.7	chr3	194137861	194137947	(4157612)	+	(GCC)n	Simple_repeat	1	90	(0)	2780607
12	14.4	0.0	0.0	chr3	194594760	194594783	(3700776)	+	(CAAA)n	Simple_repeat	1	24	(0)	2781461
265	22.0	9.2	0.0	chr3	194594928	194594986	(3700573)	+	L1ME5	LINE/L1	6113	6177	(17)	2781462
2184	17.4	8.4	2.0	chr3	195129231	195129728	(3165831)	C	L1MB8	LINE/L1	(0)	6178	5646	2782398
248	21.4	11.1	0.0	chr3	195271835	195271890	(3023669)	C	MIR	SINE/MIR	(157)	105	43	2782628
18	20.1	4.4	6.4	chr3	196712477	196712566	(1582993)	+	(TCCGGCG)n	Simple_repeat	1	94	(0)	2785607
17	22.6	2.7	5.3	chr3	197003012	197003085	(1292474)	+	G-rich	Low_complexity	1	76	(0)	2786205
2555	5.5	0.0	0.0	chr3	197790643	197790935	(504624)	+	AluSz	SINE/Alu	2	294	(18)	2787539
1572	18.6	0.0	6.6	chr4	1219051	1219351	(188995204)	+	AluJo	SINE/Alu	2	282	(30)	2790002
571	26.7	7.5	5.9	chr4	1219352	1219708	(188994847)	+	L1ME3	LINE/L1	3044	3207	(3734)	2790000
14	25.5	6.2	0.0	chr4	1346620	1346684	(188867871)	+	(GGCGCGG)n	Simple_repeat	1	69	(0)	2790134
12	19.8	6.3	4.5	chr4	1712193	1712255	(188502300)	+	(GCGCGG)n	Simple_repeat	1	67	(0)	2790521
28	21.4	4.1	3.0	chr4	1712256	1712275	(188502280)	+	(GGCAG)n	Simple_repeat	39	101	(0)	2790520
24	18.1	5.1	5.8	chr4	2261981	2262078	(187952477)	+	(CCGC)n	Simple_repeat	1	103	(0)	2791326
23	23.3	2.8	1.4	chr4	2764339	2764410	(187450145)	+	(CGCCC)n	Simple_repeat	1	74	(0)	2792201
180	29.7	8.8	12.9	chr4	2787531	2787708	(187426847)	+	OldhAT1	DNA/hAT-Ac	637	806	(2042)	2792243
380	34.1	1.4	2.4	chr4	10730737	10730949	(179483606)	C	LTR85a	LTR/Gypsy?	(127)	575	365	2805009
1412	13.9	1.6	0.0	chr4	10730964	10731214	(179483341)	C	L1MA4	LINE/L1	(29)	6271	6017	2805010
12	21.2	0.0	2.9	chr4	12926722	12926756	(177287799)	+	(TCTTG)n	Simple_repeat	1	35	(0)	2808507
12	21.4	4.4	2.1	chr4	16226806	16226850	(173987705)	+	(CGG)n	Simple_repeat	1	47	(0)	2813970
197	43.2	7.9	0.4	chr4	23068296	23068553	(167146002)	C	L2	LINE/L2	(804)	2615	2337	2825005
247	26.1	18.6	1.1	chr4	25238056	25238237	(164976318)	C	L4_A_Mam	LINE/RTE-X	(31)	4959	4739	2828562
458	22.7	12.2	8.0	chr4	26860087	26860273	(163354282)	+	MIR	SINE/MIR	57	252	(10)	2831733
26	23.2	0.0	4.8	chr4	26861040	26861122	(163353433)	+	(GGC)n	Simple_repeat	1	83	(0)	2831736
13	17.3	3.9	5.7	chr4	26861187	26861237	(163353318)	+	(GCTGC)n	Simple_repeat	1	53	(0)	2831737
713	29.1	2.8	3.6	chr4	26986026	26986275	(163228280)	+	MIR	SINE/MIR	15	262	(0)	2831918
13	0.0	0.0	0.0	chr4	38132334	38132350	(152082205)	+	(GCA)n	Simple_repeat	1	17	(0)	2847259
3301	17.6	0.6	5.8	chr4	38783098	38783155	(151431400)	C	L1MB3	LINE/L1	(0)	6183	6139	2848409
311	32.6	6.5	7.5	chr4	39609386	39609858	(150604697)	C	L2b	LINE/L2	(211)	3164	2695	2850002
1426	10.6	11.7	3.6	chr4	39636713	39636987	(150577568)	C	MER44A	DNA/TcMar-Tigger	(39)	300	1	2850074
12	19.9	0.0	0.0	chr4	40056774	40056802	(150157753)	+	(CCCG)n	Simple_repeat	1	29	(0)	2851169
273	22.4	6.2	8.4	chr4	40200354	40200436	(150014119)	+	MER5B	DNA/hAT-Charlie	2	82	(96)	2851477
420	32.9	12.8	0.9	chr4	40305853	40306085	(149908470)	C	MIRb	SINE/MIR	(0)	268	4	2851720
13	15.1	6.2	3.9	chr4	52659371	52659418	(137555137)	+	(GGCCGC)n	Simple_repeat	1	51	(0)	2866515
9952	15.2	3.1	6.4	chr4	52700612	52701614	(137512941)	+	LTR49-int	LTR/ERV1	4390	5386	(945)	2866583
2139	11.8	0.3	2.0	chr4	53004896	53005199	(137209356)	C	AluSz	SINE/Alu	(13)	299	1	2867107
12	17.1	2.9	2.8	chr4	53377870	53377904	(136836651)	+	(CGGAG)n	Simple_repeat	1	36	(0)	2867612
1498	19.3	9.4	4.5	chr4	55947207	55947700	(134266855)	+	LTR61	LTR/ERV1	1	559	(0)	2871738
18	21.1	1.7	4.9	chr4	68349770	68349829	(121864726)	+	(CCG)n	Simple_repeat	1	61	(0)	2888211
13	19.6	2.2	4.3	chr4	74158303	74158347	(116056208)	+	(GGTGGC)n	Simple_repeat	1	46	(0)	2895789
24	7.9	2.4	2.3	chr4	74933047	74933088	(115281467)	+	(GGC)n	Simple_repeat	1	43	(0)	2896885
25	22.1	6.3	4.4	chr4	76949773	76949899	(113264656)	+	(AGCCGG)n	Simple_repeat	1	135	(0)	2900137
524	32.3	2.0	1.5	chr4	78613644	78613892	(111600663)	+	MIRb	SINE/MIR	13	268	(0)	2902407
2564	18.7	6.1	3.1	chr4	78628979	78629204	(111585351)	C	MER77B	LTR/ERVL	(0)	700	457	2902439
616	26.1	8.7	0.9	chr4	78750342	78750554	(111464001)	C	MIR	SINE/MIR	(0)	262	32	2902689
15	5.5	0.0	0.0	chr4	78776041	78776059	(111438496)	+	(C)n	Simple_repeat	1	19	(0)	2902732
12	19.1	3.8	5.5	chr4	78776078	78776130	(111438425)	+	(GCGGCC)n	Simple_repeat	1	55	(0)	2902733
1726	29.8	8.2	1.5	chr4	80229183	80229842	(109984713)	C	L2c	LINE/L2	(775)	2644	1937	2904561
434	29.7	4.5	0.7	chr4	80229863	80230011	(109984544)	C	L1M5	LINE/L1	(1321)	4825	4671	2904566
13	13.2	6.1	0.0	chr4	82430020	82430052	(107784503)	+	(GCGC)n	Simple_repeat	1	35	(0)	2907601
300	21.4	14.3	0.0	chr4	83034764	83034847	(107179708)	+	MER5C	DNA/hAT-Charlie	216	313	(0)	2908719
2896	15.8	2.7	6.2	chr4	83222033	83222211	(106992344)	+	MER74A	LTR/ERVL	1	171	(387)	2909102
1223	12.5	26.1	0.5	chr4	83222212	83222427	(106992128)	C	AluSz6	SINE/Alu	(20)	292	2	2909103
506	32.4	4.9	2.8	chr4	85778414	85778594	(104435961)	+	MIR3	SINE/MIR	16	200	(8)	2912979
461	34.6	12.7	2.4	chr4	93334091	93334427	(96880128)	+	LFSINE_Vert	SINE/tRNA	15	391	(68)	2923494
25	26.9	1.7	5.0	chr4	99946616	99946732	(90267823)	+	(GGCGGC)n	Simple_repeat	1	119	(0)	2932376
17	25.3	2.4	4.8	chr4	102501456	102501537	(87713018)	+	(GCAGCC)n	Simple_repeat	1	84	(0)	2935761
729	12.6	0.0	0.0	chr4	102684631	102684733	(87529822)	C	MER44B	DNA/TcMar-Tigger	(0)	550	448	2936009
1436	18.6	5.7	0.0	chr4	102684733	102684980	(87529575)	C	MER44B	DNA/TcMar-Tigger	(288)	262	1	2936009
897	20.6	7.0	4.0	chr4	109990589	109991009	(80223546)	C	MLT1B	LTR/ERVL-MaLR	(19)	448	1	2945810
16	28.8	2.2	4.3	chr4	112515257	112515347	(77699208)	+	(GCCCCCC)n	Simple_repeat	1	93	(0)	2949284
351	20.6	12.1	12.8	chr4	113761739	113761855	(76452700)	+	L1MDb	LINE/L1	597	712	(5697)	2951248
20	12.0	0.0	2.6	chr4	119628968	119629005	(70585550)	+	(GGC)n	Simple_repeat	1	38	(0)	2958742
469	32.9	17.1	2.0	chr4	123776207	123776500	(66438055)	C	L2	LINE/L2	(830)	2589	2276	2964482
43	2.5	0.0	0.0	chr4	123776501	123776541	(66438014)	+	(GA)n	Simple_repeat	1	41	(0)	2964483
469	32.9	17.1	2.0	chr4	123776542	123776845	(66437710)	C	L2	LINE/L2	(1144)	2275	1882	2964482
29	21.5	6.1	5.1	chr4	128061433	128061580	(62152975)	+	(CGGCG)n	Simple_repeat	1	157	(0)	2970077
12	11.9	0.0	6.5	chr4	128809779	128809809	(61404746)	+	(GCCC)n	Simple_repeat	1	31	(0)	2971405
20	29.9	4.9	0.0	chr4	128809881	128809962	(61404593)	+	(CG)n	Simple_repeat	1	86	(0)	2971406
29	3.2	0.0	0.0	chr4	128809973	128810004	(61404551)	+	(GCG)n	Simple_repeat	1	32	(0)	2971407
18	9.6	0.0	5.4	chr4	128812298	128812334	(61402221)	+	GA-rich	Low_complexity	1	37	(0)	2971409
13	18.8	0.0	8.0	chr4	128812373	128812422	(61402133)	+	(CGGCGCG)n	Simple_repeat	1	50	(0)	2971410
1033	24.1	9.8	5.8	chr4	130028585	130028999	(60185556)	C	MER57C2	LTR/ERV1	(2)	401	1	2972900
32	22.3	0.0	1.2	chr4	139084411	139084490	(51130065)	+	(CGGCGG)n	Simple_repeat	1	80	(0)	2983898
716	21.9	3.2	0.7	chr4	143372334	143372485	(46842070)	C	L2a	LINE/L2	(0)	3426	3271	2990229
282	32.3	12.2	3.9	chr4	143372516	143372747	(46841808)	+	L3	LINE/CR1	3405	3658	(441)	2990230
14	24.8	3.0	4.3	chr4	145180703	145180769	(45033786)	+	(CGCCGC)n	Simple_repeat	1	69	(0)	2992523
291	33.3	7.1	2.7	chr4	145299787	145299974	(44914581)	+	UCON31	Unknown	148	344	(110)	2992708
13	4.3	0.0	7.1	chr4	147732031	147732058	(42482497)	+	(GGGGC)n	Simple_repeat	1	28	(0)	2996130
2014	15.8	0.0	0.0	chr4	147761018	147761315	(42453240)	C	AluJr	SINE/Alu	(13)	299	2	2996191
451	28.2	22.4	1.9	chr4	147794413	147794717	(42419838)	C	L1ME3A	LINE/L1	(12)	6161	5791	2996255
263	18.3	7.7	1.6	chr4	147794718	147794778	(42419777)	C	MIRc	SINE/MIR	(119)	149	85	2996256
261	28.9	4.5	1.0	chr4	147794784	147794908	(42419647)	C	L1ME3Cz	LINE/L1	(435)	562	473	2996257
295	26.9	12.3	3.9	chr4	151099121	151099275	(39115280)	C	MIRb	SINE/MIR	(72)	196	27	3000859
375	27.3	10.7	10.0	chr4	153520092	153520170	(36694385)	+	Charlie16a	DNA/hAT-Charlie	72	156	(186)	3004827
13	18.3	0.0	5.3	chr4	158769379	158769423	(31445132)	+	G-rich	Low_complexity	1	42	(0)	3011885
16	16.3	4.9	0.0	chr4	165207420	165207460	(25007095)	+	(GCCC)n	Simple_repeat	1	43	(0)	3020741
25	14.7	0.0	0.0	chr4	165207463	165207507	(25007048)	+	(CAG)n	Simple_repeat	1	45	(0)	3020742
12	5.5	0.0	0.0	chr4	169271019	169271037	(20943518)	+	(CGC)n	Simple_repeat	1	19	(0)	3026073
15	8.1	0.0	3.6	chr4	169271052	169271079	(20943476)	+	(AGG)n	Simple_repeat	1	28	(0)	3026074
9842	14.0	7.2	1.3	chr4	169293398	169295194	(20919361)	+	L1MA3	LINE/L1	1	1912	(4596)	3026127
581	34.3	12.7	3.0	chr4	169417055	169417486	(20797069)	C	L2b	LINE/L2	(184)	3191	2723	3026301
13	13.2	6.1	0.0	chr4	170026518	170026550	(20188005)	+	G-rich	Low_complexity	1	35	(0)	3027259
1318	31.6	6.0	4.6	chr4	179127923	179128838	(11085717)	+	HAL1	LINE/L1	1578	2507	(0)	3039097
1660	12.2	0.3	8.7	chr4	183368346	183368438	(6846117)	+	Tigger4b	DNA/TcMar-Tigger	58	132	(229)	3044816
2513	8.9	0.0	0.3	chr4	183368439	183368751	(6845804)	+	AluSx	SINE/Alu	1	312	(0)	3044817
565	31.3	5.7	2.5	chr4	184282297	184282688	(5931867)	+	LTR81	LTR/Gypsy	527	1095	(298)	3046300
958	27.0	9.8	14.1	chr4	184353594	184354081	(5860474)	+	MLT1G	LTR/ERVL-MaLR	1	499	(96)	3046420
2202	10.6	0.0	0.3	chr4	184354082	184354365	(5860190)	+	AluSx3	SINE/Alu	2	284	(27)	3046421
14	12.6	0.0	7.5	chr4	184473237	184473276	(5741279)	+	(CGCGCCC)n	Simple_repeat	1	40	(0)	3046622
1723	15.4	7.5	0.3	chr4	184537728	184538047	(5676508)	C	MER2	DNA/TcMar-Tigger	(0)	345	1	3046749
497	28.3	13.7	8.9	chr4	184538048	184538241	(5676314)	+	L1M6	LINE/L1	614	815	(5681)	3046748
236	27.4	3.2	1.0	chr4	184815452	184815544	(5399011)	C	L2c	LINE/L2	(20)	3355	3258	3047203
14	26.9	2.0	0.0	chr4	184825845	184825893	(5388662)	+	(GCCGCG)n	Simple_repeat	1	50	(0)	3047221
817	11.9	11.7	0.0	chr4	185214005	185214155	(5000400)	+	LTR36	LTR/ERV1	1	171	(440)	3047906
1714	17.4	0.0	5.7	chr4	185214277	185214593	(4999962)	+	AluJr	SINE/Alu	3	301	(11)	3047907
11	14.4	7.5	2.3	chr5	344074	344113	(181194146)	+	G-rich	Low_complexity	1	43	(0)	3055345
13	19.6	2.9	0.0	chr5	344255	344289	(181193970)	+	(GGC)n	Simple_repeat	1	36	(0)	3055346
13	21.2	2.6	0.0	chr5	1295520	1295557	(180242702)	+	G-rich	Low_complexity	1	39	(0)	3056108
33	19.2	5.1	5.5	chr5	1523884	1524021	(180014238)	+	G-rich	Low_complexity	1	145	(0)	3056316
2007	26.5	3.4	2.9	chr5	6274846	6275469	(175262790)	+	MLT1E3	LTR/ERVL-MaLR	5	650	(4)	3061611
1916	23.2	12.5	0.3	chr5	10633409	10634062	(170904197)	C	L1MC3	LINE/L1	(0)	7785	7051	3067270
327	26.8	20.2	2.8	chr5	10634063	10634248	(170904011)	C	MIRb	SINE/MIR	(49)	219	3	3067271
30	18.2	0.0	0.0	chr5	17217607	17217664	(164320595)	+	(GGC)n	Simple_repeat	1	58	(0)	3076467
16	20.9	2.9	5.7	chr5	17217831	17217898	(164320361)	+	(GCCCC)n	Simple_repeat	1	70	(0)	3076468
12	34.2	0.0	1.7	chr5	32312855	32312914	(149225345)	+	(GCG)n	Simple_repeat	1	60	(0)	3096591
3050	16.8	6.3	2.2	chr5	32542708	32543114	(148995145)	+	L1MB7	LINE/L1	5547	5963	(221)	3097078
423	25.2	12.8	3.8	chr5	35320240	35320462	(146217797)	+	MIRb	SINE/MIR	18	257	(5)	3101244
316	31.3	6.4	1.5	chr5	35518189	35518321	(146019938)	C	MER91A	DNA/hAT-Tip100	(0)	196	57	3101502
31	24.3	3.3	5.8	chr5	36241604	36241754	(145296505)	+	(GCC)n	Simple_repeat	1	156	(0)	3102472
13	13.6	2.9	2.9	chr5	36241802	36241835	(145296424)	+	G-rich	Low_complexity	1	35	(0)	3102473
18	27.2	4.9	1.2	chr5	36876605	36876685	(144661574)	+	(CGG)n	Simple_repeat	1	85	(0)	3103485
604	27.0	7.8	0.5	chr5	37248712	37248912	(144289347)	+	L1MC5a	LINE/L1	1874	2090	(687)	3104088
60	0.0	1.8	0.0	chr5	37811326	37811380	(143726879)	+	(GT)n	Simple_repeat	1	56	(0)	3105069
377	27.7	3.6	9.7	chr5	37811555	37811730	(143726529)	C	MER103C	DNA/hAT-Charlie	(61)	236	72	3105070
2106	10.1	1.7	0.0	chr5	43008369	43008655	(138529604)	C	AluSz	SINE/Alu	(20)	292	1	3112397
2271	9.2	0.3	0.0	chr5	43120440	43120734	(138417525)	C	AluSx1	SINE/Alu	(16)	296	1	3112575
17	18.6	5.3	6.2	chr5	54517730	54517805	(127020454)	+	(CGG)n	Simple_repeat	1	80	(0)	3121856
16	20.2	3.2	4.7	chr5	61330917	61330978	(120207281)	+	G-rich	Low_complexity	1	64	(0)	3132104
13	20.1	6.5	0.0	chr5	61330994	61331039	(120207220)	+	(CGCCCGC)n	Simple_repeat	1	49	(0)	3132105
35	6.9	0.0	0.0	chr5	61332327	61332372	(120205887)	+	(GGC)n	Simple_repeat	1	46	(0)	3132106
24	4.9	4.3	4.2	chr5	61332413	61332458	(120205801)	+	(GGC)n	Simple_repeat	1	48	(0)	3132106
12	9.7	0.0	0.0	chr5	61332972	61332993	(120205266)	+	(CCGT)n	Simple_repeat	1	22	(0)	3132109
695	23.1	18.5	2.6	chr5	62720262	62720659	(118817600)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	6	3134273
15	10.1	2.9	2.9	chr5	65103091	65103124	(116435135)	+	(CCCGC)n	Simple_repeat	1	35	(0)	3137372
1858	17.0	0.3	0.0	chr5	76720819	76721106	(104817153)	C	AluJb	SINE/Alu	(23)	289	1	3155460
17	15.8	2.2	4.3	chr5	77492451	77492496	(104045763)	+	(GCG)n	Simple_repeat	1	47	(0)	3156732
36	0.0	0.0	0.0	chr5	77852876	77852906	(103685353)	+	(CA)n	Simple_repeat	1	31	(0)	3157273
10634	13.9	4.7	1.2	chr5	78844748	78847129	(102691130)	C	L1MA5	LINE/L1	(2)	7319	4802	3158699
3990	23.7	3.5	6.1	chr5	78904990	78906099	(102632160)	C	L1MEf	LINE/L1	(5190)	1450	373	3158763
418	32.3	2.2	0.0	chr5	78923363	78923495	(102614764)	C	LTR16E2	LTR/ERVL	(425)	143	8	3158793
14	16.4	2.9	0.0	chr5	88729671	88729704	(92808555)	+	A-rich	Low_complexity	1	35	(0)	3172712
297	29.0	3.7	10.4	chr5	89301427	89301599	(92236660)	+	UCON105	Unknown	98	258	(15)	3173392
22	2.8	2.4	7.0	chr5	91380210	91380251	(90158008)	+	(CCG)n	Simple_repeat	1	43	(0)	3176168
19	17.6	4.2	5.4	chr5	91383382	91383387	(90154872)	+	(GCGCC)n	Simple_repeat	1	24	(50)	3176169
12	24.6	3.6	3.5	chr5	91383388	91383443	(90154816)	+	(GCC)n	Simple_repeat	1	58	(0)	3176170
19	17.6	4.2	5.4	chr5	91383444	91383452	(90154807)	+	(GCGCC)n	Simple_repeat	25	74	(0)	3176169
312	32.3	7.1	4.8	chr5	94745761	94746125	(86792134)	C	MLT1J	LTR/ERVL-MaLR	(18)	494	196	3180235
2744	17.4	5.0	3.6	chr5	95615132	95615775	(85922484)	+	L1MB7	LINE/L1	5512	6165	(19)	3181410
4427	9.5	2.2	0.5	chr5	95728658	95729280	(85808979)	+	MER41B	LTR/ERV1	1	634	(0)	3181579
16	13.1	6.8	2.1	chr5	96662445	96662488	(84875771)	+	(CCG)n	Simple_repeat	1	47	(0)	3182910
12	27.7	3.1	3.0	chr5	107671093	107671156	(73867103)	+	(CCGGC)n	Simple_repeat	1	66	(0)	3196631
29	9.9	0.0	0.0	chr5	111513121	111513163	(70025096)	+	(TG)n	Simple_repeat	1	43	(0)	3201528
24	34.9	0.0	0.0	chr5	111757369	111757454	(69780805)	+	(TC)n	Simple_repeat	1	86	(0)	3201826
18	27.9	0.0	2.9	chr5	111757614	111757681	(69780578)	+	(CGCACCC)n	Simple_repeat	1	68	(0)	3201827
14	20.0	2.4	2.3	chr5	112922243	112922284	(68615975)	+	(GCG)n	Simple_repeat	1	43	(0)	3203525
24	14.0	5.8	4.1	chr5	112922304	112922372	(68615887)	+	(CGC)n	Simple_repeat	1	73	(0)	3203526
389	27.3	14.1	0.0	chr5	113048025	113048189	(68490070)	+	MIRb	SINE/MIR	17	208	(60)	3203759
3040	18.4	1.9	0.6	chr5	113048210	113048743	(68489516)	+	MER44B	DNA/TcMar-Tigger	3	543	(7)	3203760
2274	11.5	0.0	0.0	chr5	115375647	115375942	(66162317)	C	AluSx	SINE/Alu	(16)	296	1	3206711
2425	8.3	0.3	1.3	chr5	116763584	116763897	(64774362)	C	AluSx1	SINE/Alu	(1)	311	1	3208575
2109	3.8	0.7	0.7	chr5	116766890	116767158	(64771101)	+	L1PA5	LINE/L1	5886	6154	(0)	3208580
57	0.0	0.0	0.0	chr5	121961699	121961747	(59576512)	+	(AC)n	Simple_repeat	1	49	(0)	3215350
13	25.3	5.4	0.0	chr5	123423087	123423142	(58115117)	+	(CCCCGGT)n	Simple_repeat	1	59	(0)	3217346
13	18.4	5.4	0.0	chr5	123423318	123423354	(58114905)	+	(GCC)n	Simple_repeat	1	39	(0)	3217347
466	30.7	10.9	3.3	chr5	127586269	127586480	(53951779)	C	MIR	SINE/MIR	(21)	241	12	3223045
800	18.3	7.2	0.0	chr5	127586656	127586835	(53951424)	+	L1PA17	LINE/L1	5971	6164	(2)	3223046
20	20.7	1.7	3.3	chr5	128083672	128083730	(53454529)	+	(GCC)n	Simple_repeat	1	60	(0)	3223723
12	22.9	2.3	2.3	chr5	128083748	128083790	(53454469)	+	(GCCC)n	Simple_repeat	1	44	(0)	3223724
17	24.2	1.6	3.2	chr5	132369671	132369732	(49168527)	+	(CCCGC)n	Simple_repeat	1	63	(0)	3229279
389	28.5	0.0	7.9	chr5	132467606	132467769	(49070490)	+	MIRb	SINE/MIR	105	255	(13)	3229420
184	13.9	2.7	0.0	chr5	132525591	132525626	(49012633)	C	MIRc	SINE/MIR	(208)	60	24	3229492
354	32.8	8.1	0.8	chr5	132746904	132747029	(48791230)	C	MIRb	SINE/MIR	(88)	180	45	3229870
309	33.6	3.6	2.2	chr5	134003686	134003822	(47534437)	C	MIR	SINE/MIR	(14)	248	110	3231730
183	18.2	0.0	0.0	chr5	134003822	134003854	(47534405)	+	MIRc	SINE/MIR	76	108	(160)	3231731
1002	24.9	3.1	1.6	chr5	134111784	134112040	(47426219)	+	MIR	SINE/MIR	1	261	(1)	3231960
207	36.3	5.2	4.5	chr5	134112131	134112398	(47425861)	+	L2b	LINE/L2	3080	3349	(26)	3231961
17	22.6	1.4	5.7	chr5	135399286	135399360	(46138899)	+	(CGGCCC)n	Simple_repeat	1	71	(0)	3234231
23	24.5	1.2	4.7	chr5	139648335	139648418	(41889841)	+	(GGC)n	Simple_repeat	1	85	(0)	3241241
12	9.1	7.7	4.8	chr5	139648420	139648458	(41889801)	+	(AGAGC)n	Simple_repeat	1	42	(0)	3241242
14	8.2	0.0	3.6	chr5	139648486	139648513	(41889746)	+	(CCCAG)n	Simple_repeat	1	28	(0)	3241243
14	9.6	0.0	0.0	chr5	139648803	139648825	(41889434)	+	(GCG)n	Simple_repeat	1	23	(0)	3241244
24	17.4	7.6	1.2	chr5	140042801	140042879	(41495380)	+	(GCGGCT)n	Simple_repeat	1	85	(0)	3241897
64	5.7	2.1	2.1	chr5	140042904	140042998	(41495261)	+	(TGC)n	Simple_repeat	1	97	(0)	3241898
511	16.2	2.9	1.0	chr5	140719047	140719146	(40819113)	+	L1MD3	LINE/L1	6787	6888	(1107)	3243135
636	14.9	1.6	1.6	chr5	140726264	140726386	(40811873)	+	L1MC3	LINE/L1	6737	6859	(926)	3243152
247	17.4	6.8	4.2	chr5	141968852	141968923	(39569336)	+	MER5A	DNA/hAT-Charlie	27	100	(89)	3244973
667	14.3	0.0	0.0	chr5	143020164	143020247	(38518012)	C	AluJr	SINE/Alu	(228)	84	1	3247058
11	24.7	2.2	2.2	chr5	143435428	143435472	(38102787)	+	GA-rich	Low_complexity	1	46	(0)	3247650
325	31.3	1.7	0.0	chr5	143570495	143570609	(37967650)	+	MIRc	SINE/MIR	132	248	(20)	3247898
23	7.0	0.0	0.0	chr5	143693799	143693828	(37844431)	+	(A)n	Simple_repeat	1	30	(0)	3248099
17	25.0	4.3	5.1	chr5	149358053	149358146	(32180113)	+	(CCG)n	Simple_repeat	1	98	(0)	3257561
570	26.5	5.7	2.4	chr5	150407368	150407572	(31130687)	C	MamRep1879	DNA/hAT-Tip100?	(2)	214	3	3259859
2434	9.0	0.0	0.0	chr5	150409245	150409543	(31128716)	+	AluSx1	SINE/Alu	1	299	(13)	3259864
1346	11.7	0.0	0.0	chr5	150409544	150409722	(31128537)	+	AluSx1	SINE/Alu	134	312	(0)	3259865
453	28.2	11.9	0.0	chr5	150410339	150410515	(31127744)	+	MIRb	SINE/MIR	53	253	(15)	3259867
420	30.1	2.9	2.2	chr5	150412427	150412565	(31125694)	C	MIR3	SINE/MIR	(57)	151	12	3259872
230	30.9	4.9	0.0	chr5	150626318	150626414	(30911845)	+	MIR3	SINE/MIR	66	167	(41)	3260387
2405	9.2	0.0	0.3	chr5	151211519	151211823	(30326436)	C	AluSz	SINE/Alu	(8)	304	1	3261405
277	36.3	2.7	3.2	chr5	151211824	151211883	(30326376)	+	MER5A	DNA/hAT-Charlie	128	184	(5)	3261404
658	22.1	4.9	0.0	chr5	151223372	151223525	(30314734)	C	MER5A1	DNA/hAT-Charlie	(0)	166	5	3261429
288	20.3	8.6	3.2	chr5	151223529	151223632	(30314627)	C	MIR3	SINE/MIR	(42)	166	60	3261430
18	17.9	0.0	0.0	chr5	151447684	151447722	(30090537)	+	(AGCCGG)n	Simple_repeat	1	39	(0)	3261885
1356	19.2	8.3	0.7	chr5	154384304	154384602	(27153657)	C	MER33	DNA/hAT-Charlie	(0)	324	1	3267039
323	28.2	15.0	7.7	chr5	154384603	154384715	(27153544)	C	MIRc	SINE/MIR	(160)	108	2	3267037
628	31.8	6.0	2.1	chr5	154384741	154384981	(27153278)	+	MIR	SINE/MIR	2	252	(10)	3267040
11	18.1	2.4	4.8	chr5	154446098	154446138	(27092121)	+	G-rich	Low_complexity	1	42	(0)	3267171
254	27.4	21.1	1.4	chr5	154467979	154468126	(27070133)	C	MIR3	SINE/MIR	(7)	201	17	3267207
443	25.3	18.8	0.6	chr5	154487909	154488097	(27050162)	C	MIRb	SINE/MIR	(12)	250	12	3267246
319	28.3	11.7	0.0	chr5	154513679	154513784	(27024475)	+	MLT2E	LTR/ERVL	504	623	(5)	3267316
2270	17.2	4.5	1.8	chr5	154513810	154514265	(27023994)	C	L1MB2	LINE/L1	(0)	6171	5703	3267317
1219	21.5	0.5	0.5	chr5	154791651	154791870	(26746389)	C	MER8	DNA/TcMar-Tigger	(19)	220	1	3268057
542	24.7	11.9	3.4	chr5	154791882	154792057	(26746202)	C	MIRb	SINE/MIR	(66)	202	10	3268058
295	22.9	11.4	3.4	chr5	157142398	157142563	(24395696)	C	MIR3	SINE/MIR	(63)	205	24	3272145
402	32.1	13.8	0.4	chr5	157540694	157540918	(23997341)	C	L3	LINE/CR1	(53)	4046	3787	3272886
566	19.7	4.5	3.0	chr5	157540919	157541049	(23997210)	+	MER5A	DNA/hAT-Charlie	21	153	(36)	3272887
26	28.6	3.4	2.4	chr5	159099239	159099357	(22438902)	+	(CCG)n	Simple_repeat	1	123	(0)	3275545
20	11.8	2.6	0.0	chr5	159458266	159458303	(22079956)	+	(CATT)n	Simple_repeat	1	39	(0)	3276144
449	26.4	14.9	2.4	chr5	163461220	163461451	(18076808)	C	MIR	SINE/MIR	(0)	268	8	3282585
2401	5.2	0.7	1.1	chr5	163461513	163461798	(18076461)	+	AluYc	SINE/Alu	1	285	(14)	3282586
49	2.2	0.0	0.0	chr5	170331247	170331292	(11206967)	+	(AC)n	Simple_repeat	1	46	(0)	3293404
2785	2.9	0.0	0.3	chr5	172114475	172114782	(9423477)	C	AluY	SINE/Alu	(4)	307	1	3296707
219	34.9	6.7	0.8	chr5	172773419	172773545	(8764714)	+	MIR1_Amn	SINE/MIR	71	205	(25)	3298159
326	36.0	3.8	6.0	chr5	173820916	173821131	(7717128)	+	MIR	SINE/MIR	4	214	(48)	3300358
1069	14.0	1.2	0.0	chr5	173821187	173821350	(7716909)	C	MER5A	DNA/hAT-Charlie	(23)	166	1	3300359
14	18.7	2.2	4.3	chr5	176416387	176416432	(5121827)	+	(CTCCG)n	Simple_repeat	1	47	(0)	3305205
11	15.9	12.2	0.0	chr5	177133528	177133576	(4404683)	+	(CGGCAG)n	Simple_repeat	1	55	(0)	3306741
22	6.4	0.0	0.0	chr5	177426737	177426769	(4111490)	+	(CGAGC)n	Simple_repeat	1	33	(0)	3307401
20	21.6	4.9	1.6	chr5	177446749	177446809	(4091450)	+	(CG)n	Simple_repeat	1	64	(0)	3307433
11	9.7	8.6	2.6	chr5	177446973	177447007	(4091252)	+	G-rich	Low_complexity	1	38	(0)	3307434
44	24.5	0.8	2.3	chr5	177455323	177455452	(4082807)	+	(GCGCAC)n	Simple_repeat	1	131	(0)	3307451
19	12.4	0.0	0.0	chr5	177455614	177455648	(4082611)	+	(CGGGCT)n	Simple_repeat	1	35	(0)	3307452
16	14.2	5.1	0.0	chr5	178113402	178113440	(3424819)	+	G-rich	Low_complexity	1	41	(0)	3308587
18	24.7	7.6	1.0	chr5	178113595	178113686	(3424573)	+	(CCGGCG)n	Simple_repeat	1	99	(0)	3308588
12	22.0	4.8	0.0	chr5	178205185	178205226	(3333033)	+	(CGCTGG)n	Simple_repeat	1	44	(0)	3308796
19	13.0	4.8	0.0	chr5	178205276	178205317	(3332942)	+	(GCCAGG)n	Simple_repeat	1	44	(0)	3308797
17	12.6	4.3	4.1	chr5	178860283	178860329	(2677930)	+	(GCCGCT)n	Simple_repeat	1	49	(0)	3309954
13	15.7	9.3	0.0	chr5	179550804	179550846	(1987413)	+	(GCGCGCT)n	Simple_repeat	1	47	(0)	3311067
12	24.9	5.8	0.0	chr5	179796340	179796391	(1741868)	+	(CGCGCCG)n	Simple_repeat	1	55	(0)	3311605
25	18.1	1.5	3.0	chr5	179806880	179806945	(1731314)	+	G-rich	Low_complexity	1	67	(0)	3311614
702	0.0	0.0	0.0	chr5	181173650	181173724	(364535)	+	tRNA-Val-GTG	tRNA	1	75	(1)	3313784
734	0.0	0.0	0.0	chr5	181187701	181187782	(350477)	+	tRNA-Leu-CTY	tRNA	1	82	(3)	3313822
670	1.4	0.0	0.0	chr5	181188416	181188488	(349771)	C	tRNA-Val-GTY	tRNA	(3)	73	1	3313824
648	0.0	0.0	0.0	chr5	181188854	181188925	(349334)	C	tRNA-Pro-CCA	tRNA	(3)	72	1	3313825
638	0.0	1.4	0.0	chr5	181191687	181191758	(346501)	C	tRNA-Thr-ACA	tRNA	(3)	73	1	3313826
12	16.5	0.0	0.0	chr5	181199344	181199370	(338889)	+	(CTTT)n	Simple_repeat	1	27	(0)	3313836
606	5.6	0.0	0.0	chr5	181206868	181206939	(331320)	+	tRNA-Ala-GCG	tRNA	1	72	(3)	3313850
671	1.3	0.0	0.0	chr5	181207755	181207830	(330429)	+	tRNA-Lys-AAG	tRNA	1	76	(0)	3313853
688	0.0	0.0	0.0	chr5	181218270	181218342	(319917)	C	tRNA-Val-GTY	tRNA	(3)	73	1	3313881
660	0.0	0.0	0.0	chr5	181222394	181222467	(315792)	C	tRNA-Val-GTG	tRNA	(2)	74	1	3313890
14	25.2	0.0	5.3	chr5	181246451	181246507	(291752)	+	(GCCCC)n	Simple_repeat	1	57	(0)	3313921
187	23.4	4.5	7.2	chr6	305981	306049	(170499930)	C	UCON71_Crp	Unknown	(47)	230	164	3314668
329	26.2	4.5	1.8	chr6	309231	309339	(170496640)	C	LTR56	LTR/ERV1	(333)	112	1	3314674
2125	22.3	10.0	3.7	chr6	2866147	2866834	(167939145)	+	MER21C	LTR/ERVL	2	876	(62)	3318026
667	18.4	3.7	0.0	chr6	2866928	2867047	(167938932)	C	FLAM_C	SINE/Alu	(90)	212	1	3318027
15	23.0	2.9	8.6	chr6	3118584	3118685	(167687294)	+	(GGCGG)n	Simple_repeat	1	105	(0)	3318430
15	23.0	0.0	5.4	chr6	3157761	3157816	(167648163)	+	G-rich	Low_complexity	1	56	(0)	3318484
42	22.5	1.8	6.9	chr6	4776143	4776313	(166029666)	+	(GCCCC)n	Simple_repeat	1	174	(0)	3321052
277	21.1	0.0	0.0	chr6	4777353	4777404	(166028575)	C	Eulor9C	DNA	(62)	208	157	3321056
556	22.4	2.7	2.7	chr6	4811963	4812109	(165993870)	+	MER5A1	DNA/hAT-Charlie	1	147	(19)	3321097
367	28.2	13.6	6.9	chr6	4812193	4812512	(165993467)	C	L1ME3G	LINE/L1	(296)	628	284	3321098
12	18.6	5.4	0.0	chr6	5004047	5004083	(165801896)	+	(CGCCC)n	Simple_repeat	1	39	(0)	3321336
269	29.4	10.1	6.1	chr6	5278096	5278276	(165527703)	+	MIRc	SINE/MIR	6	194	(74)	3321796
15	7.7	3.6	0.0	chr6	6407363	6407390	(164398589)	+	(GCTCT)n	Simple_repeat	1	29	(0)	3323375
4680	19.3	3.8	1.9	chr6	6407427	6408484	(164397495)	+	Tigger6a	DNA/TcMar-Tigger	1	1079	(4)	3323376
199	30.8	0.0	0.0	chr6	6918470	6918521	(163887458)	+	L2c	LINE/L2	3281	3332	(55)	3324205
342	31.2	5.2	7.3	chr6	11277863	11278080	(159527899)	+	LTR33	LTR/ERVL	4	216	(299)	3330987
5590	13.8	2.6	4.6	chr6	11785273	11785419	(159020560)	+	L1MA8	LINE/L1	6149	6288	(3)	3331721
453	28.7	3.7	2.6	chr6	11785509	11785705	(159020274)	C	L2c	LINE/L2	(18)	3357	3193	3331723
13	19.4	4.9	0.0	chr6	14211240	14211280	(156594699)	+	(GCCTC)n	Simple_repeat	1	43	(0)	3335634
735	16.6	9.3	1.7	chr6	14750608	14750785	(156055194)	+	MER53	DNA/hAT	1	193	(0)	3336490
532	30.6	10.8	0.8	chr6	15735654	15735887	(155070092)	+	MIR	SINE/MIR	3	262	(0)	3338355
335	29.9	14.6	2.8	chr6	15735885	15736101	(155069878)	C	MIRc	SINE/MIR	(19)	249	3	3338356
4240	12.7	0.6	3.5	chr6	15897676	15898039	(154907940)	+	MER41B	LTR/ERV1	1	362	(272)	3338641
29	16.0	5.5	4.2	chr6	16238600	16238690	(154567289)	+	(GCC)n	Simple_repeat	1	96	(0)	3339210
208	18.6	10.6	4.8	chr6	16763170	16763231	(154042748)	+	LFSINE_Vert	SINE/tRNA	123	188	(271)	3340019
7632	13.2	18.0	0.9	chr6	20318738	20320042	(150485937)	+	LTR12C	LTR/ERV1	3	1579	(0)	3345811
21	7.5	0.0	0.0	chr6	21594265	21594292	(149211687)	+	(GA)n	Simple_repeat	1	28	(0)	3347915
13687	8.7	5.7	0.2	chr6	22373912	22376175	(148429804)	+	HUERS-P3b-int	LTR/ERV1	4719	7107	(311)	3349186
14	7.5	3.3	3.2	chr6	22381966	22381995	(148423984)	+	(AAACC)n	Simple_repeat	1	31	(0)	3349195
15	29.0	0.0	3.2	chr6	24495062	24495130	(146310849)	+	(CCGCCC)n	Simple_repeat	1	66	(0)	3352039
23	14.7	2.2	0.0	chr6	24720260	24720304	(146085675)	+	(GGC)n	Simple_repeat	1	46	(0)	3352413
639	26.8	7.9	1.0	chr6	25043205	25043404	(145762575)	C	MamRep1879	DNA/hAT-Tip100?	(1)	215	1	3352990
2145	9.0	8.1	1.4	chr6	26125750	26126038	(144679941)	C	AluSq	SINE/Alu	(3)	310	1	3354669
238	17.6	8.3	1.5	chr6	26157243	26157310	(144648669)	C	AluY	SINE/Alu	(15)	287	214	3354736
1553	16.2	1.0	5.4	chr6	26249689	26250003	(144555976)	C	AluSz	SINE/Alu	(11)	301	1	3354891
651	0.0	0.0	0.0	chr6	26286526	26286597	(144519382)	+	tRNA-Met-i	tRNA	1	72	(3)	3354954
671	1.2	0.0	2.4	chr6	26305489	26305570	(144500409)	C	tRNA-Ser-AGY	tRNA	(2)	83	4	3354981
623	4.2	0.0	0.0	chr6	26311196	26311267	(144494712)	C	tRNA-Gln-CAA	tRNA	(3)	72	1	3354996
623	4.2	0.0	0.0	chr6	26311747	26311818	(144494161)	C	tRNA-Gln-CAA	tRNA	(3)	72	1	3354997
732	1.2	0.0	0.0	chr6	26312596	26312677	(144493302)	C	tRNA-Ser-TCA_	tRNA	(3)	82	1	3354998
664	1.4	0.0	0.0	chr6	26322818	26322890	(144483089)	+	tRNA-Arg-CGA	tRNA	1	73	(3)	3355024
752	1.2	0.0	0.0	chr6	26327589	26327673	(144478306)	+	tRNA-Ser-TCY	tRNA	1	85	(0)	3355033
650	1.4	0.0	0.0	chr6	26328140	26328212	(144477767)	+	tRNA-Arg-CGY_	tRNA	1	73	(3)	3355034
651	0.0	0.0	0.0	chr6	26330301	26330372	(144475607)	C	tRNA-Met-i	tRNA	(3)	72	1	3355038
667	1.3	0.0	0.0	chr6	26331441	26331515	(144474464)	C	tRNA-Trp-TGG	tRNA	(0)	75	1	3355039
583	9.6	0.0	0.0	chr6	26521208	26521290	(144284689)	+	tRNA-Leu-CTG	tRNA	1	83	(3)	3355398
679	0.0	0.0	0.0	chr6	26532917	26532990	(144272989)	C	tRNA-Thr-ACY_	tRNA	(3)	74	1	3355416
650	1.4	0.0	0.0	chr6	26537498	26537570	(144268409)	+	tRNA-Arg-CGY_	tRNA	1	73	(3)	3355427
686	0.0	0.0	0.0	chr6	26538054	26538127	(144267852)	+	tRNA-Val-GTG	tRNA	1	74	(2)	3355428
597	5.6	0.0	0.0	chr6	26553503	26553574	(144252405)	+	tRNA-Ala-GCG	tRNA	1	72	(3)	3355456
668	0.0	0.0	0.0	chr6	26554122	26554195	(144251784)	+	tRNA-Ile-ATT	tRNA	1	74	(3)	3355457
643	0.0	0.0	0.0	chr6	26555270	26555341	(144250638)	+	tRNA-Pro-CCY	tRNA	1	72	(3)	3355459
665	0.0	0.0	0.0	chr6	26556546	26556619	(144249360)	+	tRNA-Lys-AAG	tRNA	1	74	(2)	3355461
2069	10.8	0.3	3.3	chr6	26568131	26568437	(144237542)	+	AluSz6	SINE/Alu	1	298	(14)	3355490
515	2.7	0.0	19.8	chr6	26568858	26568948	(144237031)	+	tRNA-Tyr-TAC	tRNA	1	73	(3)	3355491
631	4.1	0.0	0.0	chr6	26571864	26571936	(144234043)	C	tRNA-Ala-GCY	tRNA	(3)	73	1	3355497
511	4.0	0.0	17.8	chr6	26577104	26577193	(144228786)	+	tRNA-Tyr-TAC	tRNA	1	74	(2)	3355507
514	2.7	0.0	18.0	chr6	26594874	26594962	(144211017)	+	tRNA-Tyr-TAC	tRNA	1	73	(3)	3355542
11	21.2	0.0	2.9	chr6	26599883	26599917	(144206062)	+	(TTTCTT)n	Simple_repeat	1	35	(0)	3355544
1499	16.9	8.9	0.5	chr6	27078759	27079066	(143726913)	+	MER61B	LTR/ERV1	1	427	(0)	3356253
614	1.4	0.0	0.0	chr6	27091742	27091813	(143714166)	+	tRNA-Pro-CCG	tRNA	1	72	(3)	3356276
661	2.8	0.0	0.0	chr6	27158127	27158198	(143647781)	+	tRNA-His-CAY_	tRNA	1	72	(3)	3356395
27	0.0	3.5	0.0	chr6	27177039	27177067	(143628912)	+	(AAGAAAA)n	Simple_repeat	1	30	(0)	3356431
22	17.3	0.0	0.0	chr6	27177166	27177204	(143628775)	+	A-rich	Low_complexity	1	39	(0)	3356432
677	0.0	0.0	0.0	chr6	27177214	27177288	(143628691)	C	tRNA-Ile-ATT	tRNA	(2)	75	1	3356433
677	0.0	0.0	0.0	chr6	27237570	27237644	(143568335)	C	tRNA-Ile-ATT	tRNA	(2)	75	1	3356559
650	0.0	0.0	0.0	chr6	27332985	27333056	(143472923)	C	tRNA-Met-i	tRNA	(3)	72	1	3356727
748	0.0	0.0	0.0	chr6	27478812	27478893	(143327086)	+	tRNA-Ser-TCY	tRNA	1	82	(3)	3356951
643	0.0	0.0	0.0	chr6	27479674	27479745	(143326234)	+	tRNA-Asp-GAY	tRNA	1	72	(3)	3356952
748	0.0	0.0	0.0	chr6	27495814	27495895	(143310084)	+	tRNA-Ser-TCY	tRNA	1	82	(3)	3356989
788	0.0	0.0	0.0	chr6	27503039	27503120	(143302859)	+	tRNA-Ser-TCY	tRNA	1	82	(3)	3357006
676	0.0	0.0	0.0	chr6	27503744	27503815	(143302164)	+	tRNA-Asp-GAY	tRNA	1	72	(3)	3357007
748	2.4	0.0	0.0	chr6	27505828	27505909	(143300070)	C	tRNA-Ser-TCA_	tRNA	(3)	82	1	3357009
667	2.8	0.0	0.0	chr6	27519529	27519600	(143286379)	+	tRNA-Gln-CAG	tRNA	1	72	(3)	3357033
754	2.4	0.0	0.0	chr6	27553413	27553494	(143252485)	C	tRNA-Ser-TCY	tRNA	(3)	82	1	3357102
15	9.0	12.2	1.8	chr6	27553496	27553544	(143252435)	+	(GACAT)n	Simple_repeat	1	55	(0)	3357103
16	7.5	0.0	6.2	chr6	27583326	27583357	(143222622)	+	(TAA)n	Simple_repeat	1	32	(0)	3357162
606	2.8	0.0	0.0	chr6	27583457	27583528	(143222451)	C	tRNA-Asp-GAY	tRNA	(3)	72	1	3357163
665	1.4	0.0	0.0	chr6	27591814	27591886	(143214093)	C	tRNA-Lys-AAA	tRNA	(3)	73	1	3357178
651	0.0	0.0	0.0	chr6	27592821	27592892	(143213087)	C	tRNA-Met-i	tRNA	(3)	72	1	3357179
633	2.7	0.0	0.0	chr6	27668583	27668657	(143137322)	+	tRNA-Ile-ATT	tRNA	1	75	(2)	3357335
680	0.0	0.0	0.0	chr6	27670564	27670637	(143135342)	C	tRNA-Arg-CGY_	tRNA	(2)	74	1	3357338
2229	9.2	0.7	0.7	chr6	27672004	27672297	(143133682)	C	AluSz	SINE/Alu	(18)	294	1	3357340
692	6.0	0.0	0.0	chr6	27672448	27672531	(143133448)	C	tRNA-Ser-TCG	tRNA	(1)	84	1	3357341
679	0.0	0.0	0.0	chr6	27684695	27684768	(143121211)	C	tRNA-Thr-ACY_	tRNA	(3)	74	1	3357369
648	1.4	0.0	0.0	chr6	27688188	27688261	(143117718)	+	tRNA-Ile-ATT	tRNA	1	74	(3)	3357376
721	25.7	8.8	4.4	chr6	27752233	27752560	(143053419)	C	LTR41	LTR/ERVL	(349)	419	5	3357533
681	0.0	0.0	0.0	chr6	27753400	27753472	(143052507)	C	tRNA-Val-GTY	tRNA	(3)	73	1	3357536
13	0.0	0.0	0.0	chr6	27754388	27754404	(143051575)	+	(AAT)n	Simple_repeat	1	17	(0)	3357537
258	29.5	0.0	0.0	chr6	27754415	27754475	(143051504)	C	tRNA-Val-GTY	tRNA	(15)	61	1	3357538
573	7.0	0.0	0.0	chr6	27791357	27791427	(143014552)	C	tRNA-Gln-CAA	tRNA	(4)	71	1	3357599
627	5.4	0.0	0.0	chr6	27795859	27795932	(143010047)	C	tRNA-Gln-CAA	tRNA	(1)	74	1	3357606
1723	8.8	1.4	0.0	chr6	27824836	27825052	(142980927)	C	AluSc	SINE/Alu	(56)	253	34	3357657
15	5.6	0.0	0.0	chr6	27902474	27902492	(142903487)	+	(A)n	Simple_repeat	1	19	(0)	3357801
650	0.0	0.0	0.0	chr6	27902493	27902564	(142903415)	C	tRNA-Met-i	tRNA	(3)	72	1	3357802
626	1.4	0.0	0.0	chr6	27902908	27902978	(142903001)	C	tRNA-Gly-GGY	tRNA	(3)	71	1	3357803
749	0.0	0.0	0.0	chr6	28213037	28213118	(142592861)	+	tRNA-Ser-AGY	tRNA	1	82	(3)	3358258
187	30.7	7.3	8.2	chr6	28589183	28589292	(142216687)	C	L3b	LINE/CR1	(531)	4701	4593	3358868
666	0.0	0.0	0.0	chr6	28589379	28589450	(142216529)	+	tRNA-Gln-CAA	tRNA	1	72	(3)	3358869
628	4.0	0.0	0.0	chr6	28607156	28607230	(142198749)	+	tRNA-Ala-GCY_	tRNA	1	75	(0)	3358903
585	6.9	0.0	0.0	chr6	28643445	28643516	(142162463)	+	tRNA-Ala-GCG	tRNA	1	72	(3)	3358957
659	1.4	0.0	0.0	chr6	28648207	28648280	(142157699)	C	tRNA-Thr-ACG_	tRNA	(3)	74	1	3358969
573	8.3	0.0	0.0	chr6	28658237	28658308	(142147671)	C	tRNA-Ala-GCY_	tRNA	(3)	72	1	3358985
499	8.3	0.0	0.0	chr6	28729315	28729386	(142076593)	+	tRNA-Ala-GCY_	tRNA	1	72	(3)	3359110
619	1.4	0.0	0.0	chr6	28838444	28838515	(141967464)	C	tRNA-Ala-GCY_	tRNA	(3)	72	1	3359318
619	1.4	0.0	0.0	chr6	28863685	28863756	(141942223)	C	tRNA-Ala-GCY_	tRNA	(3)	72	1	3359354
668	1.3	0.0	0.0	chr6	28881388	28881462	(141924517)	+	tRNA-Arg-CGG	tRNA	1	75	(1)	3359379
619	1.2	0.0	21.5	chr6	28896222	28896328	(141909651)	C	tRNA-Leu-TTG	tRNA	(2)	84	1	3359411
194	16.3	0.0	8.5	chr6	28897263	28897309	(141908670)	+	L2a	LINE/L2	3366	3408	(18)	3359413
624	1.2	0.0	20.8	chr6	28941053	28941158	(141864821)	+	tRNA-Leu-TTG	tRNA	1	84	(2)	3359510
636	2.8	0.0	0.0	chr6	28941601	28941672	(141864307)	C	tRNA-Gln-CAG	tRNA	(3)	72	1	3359511
722	0.0	0.0	0.0	chr6	28943622	28943703	(141862276)	C	tRNA-Leu-CTY	tRNA	(3)	82	1	3359515
556	6.8	0.0	0.0	chr6	28944575	28944647	(141861332)	+	tRNA-Met_	tRNA	1	73	(3)	3359516
656	1.4	0.0	0.0	chr6	28951029	28951101	(141854878)	+	tRNA-Lys-AAA	tRNA	1	73	(3)	3359526
556	6.8	0.0	0.0	chr6	28953265	28953337	(141852642)	C	tRNA-Met_	tRNA	(3)	73	1	3359531
661	1.4	0.0	0.0	chr6	28981672	28981744	(141824235)	C	tRNA-Phe-TTY	tRNA	(3)	73	1	3359573
16	19.0	2.4	0.0	chr6	28981779	28981820	(141824159)	+	(ATTTATT)n	Simple_repeat	1	43	(0)	3359574
624	0.0	0.0	0.0	chr6	28982199	28982270	(141823709)	+	tRNA-Glu-GAG_	tRNA	1	72	(3)	3359575
317	28.1	15.4	5.0	chr6	30673180	30673381	(140132598)	C	L2a	LINE/L2	(3)	3423	3197	3362001
2430	8.0	0.6	0.3	chr6	30907508	30907819	(139898160)	C	AluSq2	SINE/Alu	(0)	313	1	3362482
14	19.8	2.3	2.3	chr6	31795863	31795905	(139010074)	+	(CGCAGGA)n	Simple_repeat	1	44	(0)	3363903
372	30.7	12.5	2.9	chr6	31863785	31863982	(138941997)	+	MIR	SINE/MIR	15	228	(34)	3364052
467	31.5	8.9	0.9	chr6	32940454	32940651	(137865328)	C	L2b	LINE/L2	(4)	3422	3214	3365635
247	28.0	14.2	2.1	chr6	33454055	33454248	(137351731)	+	MIRb	SINE/MIR	20	253	(15)	3366469
12	17.6	0.0	5.6	chr6	34237135	34237170	(136568809)	+	(GCG)n	Simple_repeat	1	36	(0)	3367936
13	26.5	2.2	0.0	chr6	34237361	34237405	(136568574)	+	(CGCC)n	Simple_repeat	1	46	(0)	3367937
779	15.8	2.4	0.0	chr6	34316044	34316163	(136489816)	C	AluJr	SINE/Alu	(189)	123	1	3368102
25	25.1	0.9	6.2	chr6	34527180	34527290	(136278689)	+	G-rich	Low_complexity	1	112	(0)	3368607
1472	16.5	25.1	3.5	chr6	34662380	34662794	(136143185)	+	L1MB3	LINE/L1	5620	6120	(51)	3368852
1781	15.9	1.4	6.8	chr6	34662795	34663102	(136142877)	+	AluJb	SINE/Alu	1	291	(21)	3368853
584	24.4	7.2	1.6	chr6	34671742	34671924	(136134055)	+	HAL1	LINE/L1	92	285	(2222)	3368873
1860	13.6	5.1	0.4	chr6	34672110	34672388	(136133591)	C	AluSz	SINE/Alu	(19)	293	1	3368874
12	31.3	0.0	0.0	chr6	35259735	35259781	(135546198)	+	(GCGG)n	Simple_repeat	1	47	(0)	3369993
306	30.5	7.1	0.8	chr6	36677702	36677820	(134128159)	+	MIR3	SINE/MIR	6	132	(76)	3373074
14	29.1	2.5	3.7	chr6	36986351	36986430	(133819549)	+	G-rich	Low_complexity	1	82	(0)	3373670
23	24.5	3.5	2.3	chr6	37170158	37170242	(133635737)	+	(GGC)n	Simple_repeat	1	88	(0)	3374136
32	0.0	0.0	0.0	chr6	37170248	37170277	(133635702)	+	(GCA)n	Simple_repeat	1	30	(0)	3374137
35	20.9	0.0	0.0	chr6	37170434	37170510	(133635469)	+	(CAGCCA)n	Simple_repeat	1	77	(0)	3374138
1884	11.7	15.3	9.5	chr6	39753001	39753205	(131052774)	+	MER51B	LTR/ERV1	184	376	(1)	3378473
1648	8.3	0.9	0.0	chr6	39753206	39753423	(131052556)	C	MER41B	LTR/ERV1	(414)	220	1	3378476
280	28.7	5.0	1.1	chr6	40251585	40251679	(130554300)	+	L3	LINE/CR1	3889	3987	(112)	3379127
196	33.0	0.8	7.8	chr6	40251766	40251893	(130554086)	+	MIR3	SINE/MIR	14	132	(76)	3379128
32	0.0	0.0	0.0	chr6	41779741	41779770	(129026209)	+	(GCGGC)n	Simple_repeat	1	30	(0)	3381803
15	12.6	8.9	2.0	chr6	41786632	41786676	(129019303)	+	(CGG)n	Simple_repeat	1	49	(0)	3381816
12	43.1	0.0	0.0	chr6	42452222	42452296	(128353683)	+	G-rich	Low_complexity	1	75	(0)	3383278
14	14.9	5.4	0.0	chr6	42783122	42783158	(128022821)	+	(CGCTCC)n	Simple_repeat	1	39	(0)	3384026
13	16.4	8.6	3.2	chr6	42783234	42783291	(128022688)	+	(CCGCGG)n	Simple_repeat	1	63	(0)	3384027
182	32.1	10.7	9.9	chr6	42929876	42930228	(127875751)	C	L2c	LINE/L2	(70)	3317	2962	3384363
281	23.8	13.7	2.9	chr6	42930269	42930372	(127875607)	+	L2c	LINE/L2	3256	3372	(15)	3384364
361	28.9	3.7	0.0	chr6	43271317	43271420	(127534559)	+	MER91C	DNA/hAT-Tip100	2	109	(31)	3385039
30	26.8	4.2	1.6	chr6	43369433	43369552	(127436427)	+	(CGC)n	Simple_repeat	1	125	(0)	3385201
588	30.8	11.9	0.5	chr6	43715185	43715393	(127090586)	+	MIR	SINE/MIR	2	237	(25)	3385887
16	21.7	0.0	2.6	chr6	44074597	44074635	(126731344)	+	(AC)n	Simple_repeat	1	39	(0)	3386518
66	3.1	0.0	0.0	chr6	44260827	44260891	(126545088)	+	(AC)n	Simple_repeat	1	65	(0)	3386865
13	21.1	2.6	0.0	chr6	44313284	44313321	(126492658)	+	(GCCGCT)n	Simple_repeat	1	39	(0)	3386940
632	26.4	0.9	7.1	chr6	44868079	44868318	(125937661)	+	MER121	DNA/hAT?	93	317	(84)	3387864
13	14.9	5.1	2.4	chr6	45377470	45377508	(125428471)	+	(CAGCC)n	Simple_repeat	1	41	(0)	3388537
14	13.7	3.1	0.0	chr6	45377643	45377674	(125428305)	+	G-rich	Low_complexity	1	33	(0)	3388538
2993	0.3	0.0	0.3	chr6	52995620	52995951	(117810028)	+	7SK	RNA	1	331	(0)	3399374
12	9.7	8.6	2.6	chr6	53348638	53348672	(117457307)	+	(CGGAG)n	Simple_repeat	1	38	(0)	3400037
14	23.1	2.1	2.1	chr6	53348858	53348904	(117457075)	+	(GGC)n	Simple_repeat	1	48	(0)	3400038
12	23.5	2.5	0.0	chr6	53544953	53544992	(117260987)	+	(GCGGCG)n	Simple_repeat	1	41	(0)	3400326
20	25.2	0.0	7.6	chr6	53794964	53794988	(117010991)	+	(GCG)n	Simple_repeat	1	52	(51)	3400740
13	22.8	1.5	7.6	chr6	53794989	53795053	(117010926)	+	(GCGG)n	Simple_repeat	1	66	(0)	3400741
250	27.1	4.0	3.0	chr6	57317069	57317167	(113488812)	+	MIR	SINE/MIR	93	192	(70)	3405449
13	20.1	1.7	8.2	chr6	63572479	63572538	(107233441)	+	(CGGCT)n	Simple_repeat	1	61	(0)	3410802
34	24.6	2.0	1.0	chr6	63572569	63572666	(107233313)	+	(GCC)n	Simple_repeat	1	100	(0)	3410803
1714	27.1	5.9	3.2	chr6	63598416	63598975	(107207004)	C	LTR33C	LTR/ERVL	(29)	600	25	3410846
2406	15.1	3.7	3.9	chr6	71366496	71366957	(99439022)	+	LOR1b	LTR/ERV1	1	461	(0)	3420482
5298	13.6	3.6	0.6	chr6	82326421	82327376	(88478603)	C	L1PB3	LINE/L1	(1)	6153	5175	3435010
2334	29.3	5.6	1.7	chr6	84575178	84576675	(86229304)	+	ERVL-E-int	LTR/ERVL	1177	2735	(2932)	3438012
960	16.9	0.0	0.7	chr6	85354991	85355138	(85450841)	C	AluJo	SINE/Alu	(30)	282	136	3438923
220	26.2	15.8	5.3	chr6	85355332	85355444	(85450535)	C	MIR3	SINE/MIR	(78)	130	4	3438924
288	34.3	6.1	0.0	chr6	85461218	85461325	(85344654)	+	Charlie17a	DNA/hAT-Charlie	101	215	(2)	3439093
20	24.0	2.4	4.6	chr6	85643596	85643680	(85162299)	+	(CCCCG)n	Simple_repeat	1	87	(0)	3439346
13	10.4	2.9	5.6	chr6	85643759	85643793	(85162186)	+	(CGCGCC)n	Simple_repeat	1	36	(0)	3439347
2341	9.9	0.3	2.0	chr6	87796236	87796537	(83009442)	+	AluSx	SINE/Alu	1	297	(15)	3442230
384	30.2	9.6	1.1	chr6	88179610	88179800	(82626179)	C	LTR33A_	LTR/ERVL	(0)	515	307	3442809
458	32.6	2.9	2.9	chr6	88179819	88180058	(82625921)	C	LTR33A_	LTR/ERVL	(269)	262	23	3442809
13	23.9	3.1	4.5	chr6	89433119	89433182	(81372797)	+	G-rich	Low_complexity	1	66	(0)	3444762
467	30.2	3.8	5.8	chr6	91482303	91482492	(79323487)	C	MIRc	SINE/MIR	(51)	217	32	3447761
242	27.9	5.5	1.9	chr6	91482511	91482616	(79323363)	+	X7B_LINE	LINE/CR1	127	236	(14)	3447762
1189	26.6	3.8	1.6	chr6	92826584	92826892	(77979087)	+	MER4-int	LTR/ERV1	1852	2167	(4164)	3449353
5016	18.4	9.8	8.1	chr6	92826950	92827792	(77978187)	+	MER4B-int	LTR/ERV1	196	1138	(5620)	3449354
25	21.4	9.3	2.1	chr6	105402895	105403023	(65402956)	+	G-rich	Low_complexity	1	141	(0)	3465369
14	14.6	0.0	3.1	chr6	105403119	105403171	(65402808)	+	(CGG)n	Simple_repeat	1	51	(0)	3465370
1813	4.7	0.0	0.5	chr6	107027849	107028060	(63777919)	+	AluY	SINE/Alu	1	211	(100)	3468021
292	31.3	7.9	5.4	chr6	107317826	107318156	(63487823)	+	Charlie19a	DNA/hAT-Charlie	2	341	(45)	3468668
1467	19.0	3.4	5.6	chr6	110039486	110039842	(60766137)	C	MLT1B	LTR/ERVL-MaLR	(38)	352	4	3473070
27	22.9	3.4	5.0	chr6	110815172	110815241	(59990738)	+	(GCCGCCC)n	Simple_repeat	1	108	(13)	3474363
17	8.0	10.0	0.0	chr6	110815242	110815281	(59990698)	+	(CGCG)n	Simple_repeat	1	44	(0)	3474364
27	22.9	3.4	5.0	chr6	110815282	110815288	(59990691)	+	(GCCGCCC)n	Simple_repeat	109	121	(0)	3474363
12	22.6	0.0	2.6	chr6	111806022	111806059	(58999920)	+	(GGAAGTG)n	Simple_repeat	1	38	(0)	3476217
492	21.1	0.0	1.6	chr6	113626183	113626305	(57179674)	+	FLAM_C	SINE/Alu	12	133	(0)	3478774
214	23.7	11.6	0.0	chr6	113663090	113663165	(57142814)	C	MIR3	SINE/MIR	(10)	198	113	3478835
233	26.4	4.4	6.5	chr6	113663222	113663314	(57142665)	C	MamTip2	DNA/hAT-Tip100	(168)	137	47	3478836
24	21.1	0.0	0.0	chr6	125780118	125780166	(45025813)	+	A-rich	Low_complexity	1	49	(0)	3494810
626	0.0	0.0	0.0	chr6	125780247	125780318	(45025661)	C	tRNA-Glu-GAG_	tRNA	(3)	72	1	3494811
15	10.1	2.9	2.9	chr6	127266776	127266809	(43539170)	+	G-rich	Low_complexity	1	35	(0)	3496650
395	28.9	13.4	0.0	chr6	129671794	129671942	(41134037)	C	MER20B	DNA/hAT-Charlie	(592)	191	20	3499771
240	25.0	5.7	7.0	chr6	129671953	129672072	(41133907)	C	MIRc	SINE/MIR	(48)	160	44	3499773
15	18.1	3.1	0.0	chr6	129672077	129672108	(41133871)	+	(CA)n	Simple_repeat	1	33	(0)	3499774
13	20.9	1.0	5.2	chr6	136822627	136822692	(33983287)	+	G-rich	Low_complexity	1	63	(0)	3510537
14	20.6	0.0	6.0	chr6	136822798	136822847	(33983132)	+	(GAGGCG)n	Simple_repeat	1	50	(0)	3510538
632	18.5	16.8	2.1	chr6	137172813	137173055	(33632924)	+	L1MC5	LINE/L1	9005	9290	(14)	3511075
2692	26.1	9.2	8.8	chr6	137678324	137679069	(33126910)	+	L1MC4	LINE/L1	6249	7012	(1030)	3511806
433	23.9	0.0	0.0	chr6	138455989	138456094	(32349885)	C	MIRb	SINE/MIR	(0)	262	157	3512978
657	16.3	3.1	0.8	chr6	138456095	138456218	(32349761)	C	MER94	DNA/hAT-Blackjack	(0)	134	8	3512979
271	29.4	5.6	1.9	chr6	138456221	138456324	(32349655)	C	MIRc	SINE/MIR	(115)	153	46	3512980
1679	19.2	9.3	16.4	chr6	138514924	138515262	(32290717)	C	MER44B	DNA/TcMar-Tigger	(201)	349	1	3513085
12	19.4	0.0	5.1	chr6	138693300	138693338	(32112641)	+	(CCGCGC)n	Simple_repeat	1	39	(0)	3513360
13	20.7	4.3	2.1	chr6	138693515	138693560	(32112419)	+	(GCTCC)n	Simple_repeat	1	48	(0)	3513361
30	34.8	0.0	0.0	chr6	139373348	139373463	(31432516)	+	(GCC)n	Simple_repeat	1	116	(0)	3514554
181	33.0	2.0	5.8	chr6	141483617	141483719	(29322260)	+	MER131	DNA?	46	144	(71)	3517315
14	11.7	8.1	0.0	chr6	142926996	142927032	(27878947)	+	(GCGGC)n	Simple_repeat	1	40	(0)	3519160
16	7.5	3.6	0.0	chr6	143450810	143450837	(27355142)	+	(GCG)n	Simple_repeat	1	29	(0)	3519895
731	4.8	0.0	0.0	chr6	144216547	144216629	(26589350)	+	tRNA-Leu-TTA	tRNA	1	83	(3)	3521045
307	21.6	4.7	1.0	chr6	148760803	148760905	(22045074)	+	L1M	LINE/L1	5287	5393	(850)	3527405
268	32.1	2.6	0.9	chr6	149031866	149031978	(21774001)	C	L2c	LINE/L2	(250)	3137	3023	3527826
14	5.0	0.0	0.0	chr6	149718040	149718060	(21087919)	+	(GCC)n	Simple_repeat	1	21	(0)	3529015
376	24.4	9.0	7.8	chr6	153210212	153210353	(17595626)	C	UCON25	Unknown	(82)	193	50	3534599
375	20.8	1.8	2.1	chr6	154258044	154258154	(16547825)	+	L2b	LINE/L2	3056	3160	(227)	3536028
540	24.4	4.2	2.4	chr6	154258239	154258415	(16547564)	C	MIR	SINE/MIR	(41)	189	2	3536029
239	37.2	7.9	2.0	chr6	154261960	154262162	(16543817)	+	MamRTE1	LINE/RTE-BovB	3330	3545	(267)	3536037
218	33.3	3.7	1.3	chr6	154262354	154262432	(16543547)	C	L3	LINE/CR1	(1470)	2629	2549	3536038
1021	26.9	10.4	4.7	chr6	154360818	154361333	(16444646)	C	L2a	LINE/L2	(9)	3417	2869	3536241
181	28.6	7.9	0.0	chr6	155186181	155186250	(15619729)	+	MIRb	SINE/MIR	21	96	(172)	3537786
685	26.4	4.9	2.0	chr6	155186275	155186529	(15619450)	+	LTR16E1	LTR/ERVL	273	535	(3)	3537787
298	20.9	22.8	0.9	chr6	156698380	156698485	(14107494)	C	MIRc	SINE/MIR	(24)	244	109	3539840
20	20.5	3.6	0.0	chr6	156777192	156777247	(14028732)	+	(CGGCCC)n	Simple_repeat	1	58	(0)	3539992
12	32.1	2.8	1.4	chr6	157021871	157021941	(13784038)	+	(CGTCCCG)n	Simple_repeat	1	73	(0)	3540328
1320	13.9	16.3	1.6	chr6	157561664	157561914	(13244065)	C	AluSg	SINE/Alu	(15)	295	1	3541108
430	27.3	6.1	3.5	chr6	157761592	157761735	(13044244)	+	MIRc	SINE/MIR	21	168	(100)	3541426
2730	27.4	14.3	3.8	chr6	157829921	157830586	(12975393)	C	L1MEd	LINE/L1	(5115)	1988	1240	3541548
787	19.4	13.9	0.0	chr6	157830587	157830766	(12975213)	+	MER3	DNA/hAT-Charlie	1	209	(0)	3541549
2730	27.4	14.3	3.8	chr6	157830767	157831845	(12974134)	C	L1MEd	LINE/L1	(5864)	1239	29	3541548
13	14.3	10.9	0.0	chr6	158559991	158560036	(12245943)	+	(CCCGCGCG)n	Simple_repeat	1	51	(0)	3542740
13	27.4	2.0	1.9	chr6	158560131	158560179	(12245800)	+	(CGG)n	Simple_repeat	1	88	(0)	3542741
14	9.0	5.1	4.9	chr6	158560180	158560218	(12245761)	+	G-rich	Low_complexity	1	41	(0)	3542742
382	27.2	12.6	7.0	chr6	158648924	158649109	(12156870)	C	MamRep38	DNA/hAT	(5)	290	93	3542871
2236	10.7	0.7	0.0	chr6	158653225	158653523	(12152456)	+	AluSp	SINE/Alu	1	301	(12)	3542882
682	21.0	17.0	4.3	chr6	158704127	158704286	(12101693)	+	MER58B	DNA/hAT-Charlie	85	269	(72)	3542981
14	5.2	8.9	6.1	chr6	159692948	159692992	(11112987)	+	(GCGTCCCC)n	Simple_repeat	1	49	(0)	3544445
3870	17.1	3.0	1.1	chr6	159930877	159931599	(10874380)	+	L1MB3	LINE/L1	5432	6168	(15)	3544849
28	17.5	2.3	5.7	chr6	160991642	160991727	(9814252)	+	(CGC)n	Simple_repeat	1	88	(0)	3546054
36	5.0	0.0	0.0	chr6	163414675	163414716	(7391263)	+	(GAG)n	Simple_repeat	1	42	(0)	3549419
13	14.7	3.3	0.0	chr6	163414729	163414758	(7391221)	+	(GCG)n	Simple_repeat	1	31	(0)	3549420
20	27.9	1.3	1.3	chr6	163414841	163414930	(7391049)	+	(CGCCCGC)n	Simple_repeat	1	90	(0)	3549421
3042	20.1	2.5	1.4	chr6	164507319	164507954	(6298025)	+	MER73	LTR/ERVL	1	643	(1)	3550842
14	14.0	0.0	5.7	chr6	166275821	166275855	(4530124)	+	(CGC)n	Simple_repeat	1	35	(0)	3553041
210	35.5	7.3	0.0	chr6	167047645	167047720	(3758259)	+	L2c	LINE/L2	3089	3170	(205)	3553966
300	29.5	10.3	1.2	chr6	167047869	167048036	(3757943)	+	MamRep4096	DNA/hAT-Tip100	114	298	(128)	3553967
745	27.9	8.3	5.5	chr6	167094232	167094595	(3711384)	C	MamGypLTR3a	LTR/Gypsy	(419)	562	188	3554019
13	26.8	2.2	0.0	chr6	170584448	170584492	(221487)	+	(CCCG)n	Simple_repeat	1	46	(0)	3557615
19	24.3	2.6	3.8	chr7	876805	876882	(158469091)	+	(CCCCG)n	Simple_repeat	1	80	(0)	3559024
364	17.3	3.6	1.3	chr7	1024112	1024194	(158321779)	C	FLAM_C	SINE/Alu	(49)	84	1	3559191
31	24.2	5.3	5.0	chr7	2631898	2632068	(156713905)	+	G-rich	Low_complexity	1	180	(0)	3561761
2144	16.9	10.6	4.3	chr7	2838627	2839237	(156506736)	+	L1MEf	LINE/L1	2584	3237	(3300)	3562081
809	18.5	7.4	0.0	chr7	2839238	2839388	(156506585)	C	AluSx	SINE/Alu	(16)	296	134	3562084
15	17.2	1.4	10.8	chr7	4641731	4641803	(154704170)	+	(CCCTG)n	Simple_repeat	1	74	(0)	3565271
15	13.1	2.0	8.0	chr7	4682138	4682186	(154663787)	+	G-rich	Low_complexity	1	50	(0)	3565384
188	34.7	3.0	2.0	chr7	5396933	5397032	(153948941)	C	MIR3	SINE/MIR	(43)	165	65	3566926
217	22.4	0.0	0.0	chr7	5397506	5397554	(153948419)	+	MIR1_Amn	SINE/MIR	101	149	(81)	3566927
1011	15.2	3.0	1.2	chr7	5526205	5526368	(153819605)	+	AluJo	SINE/Alu	132	298	(14)	3567254
129	3.4	6.6	0.5	chr7	5538671	5538853	(153807120)	+	(AC)n	Simple_repeat	1	195	(0)	3567275
13	9.4	8.3	2.6	chr7	6059100	6059135	(153286838)	+	(GCCCA)n	Simple_repeat	1	39	(0)	3568487
1439	17.6	11.6	0.3	chr7	6250547	6250837	(153095136)	+	L1MB7	LINE/L1	5831	6158	(26)	3568885
21	17.1	5.6	6.4	chr7	6374632	6374720	(152971253)	+	(CGC)n	Simple_repeat	1	94	(0)	3569230
203	32.7	4.5	7.0	chr7	6435800	6435914	(152910059)	+	MIR3	SINE/MIR	65	176	(32)	3569357
17	13.3	7.1	0.0	chr7	6590130	6590171	(152755802)	+	(GCAG)n	Simple_repeat	1	45	(0)	3569752
13	20.1	5.0	0.0	chr7	6706693	6706732	(152639241)	+	(CCG)n	Simple_repeat	1	42	(0)	3569975
241	30.8	20.0	1.5	chr7	7577939	7578202	(151767771)	C	L2a	LINE/L2	(2282)	1137	813	3571272
1286	17.5	8.5	0.3	chr7	7821207	7821499	(151524474)	+	MER33	DNA/hAT-Charlie	4	322	(2)	3571647
13	26.3	1.6	4.6	chr7	7968727	7968790	(151377183)	+	G-rich	Low_complexity	1	65	(0)	3571872
19	12.1	2.8	0.0	chr7	7968827	7968862	(151377111)	+	(GCG)n	Simple_repeat	1	37	(0)	3571873
309	30.2	10.4	6.4	chr7	7969024	7969225	(151376748)	C	L1M4b	LINE/L1	(6249)	618	408	3571874
1039	25.6	16.5	7.1	chr7	8130856	8131390	(151214583)	+	MLT1K	LTR/ERVL-MaLR	1	595	(0)	3572095
186	20.0	5.2	8.3	chr7	10939441	10939500	(148406473)	+	MamRTE1	LINE/RTE-BovB	2122	2179	(1633)	3575541
545	27.3	7.1	2.1	chr7	17159725	17159911	(142186062)	C	MIR3	SINE/MIR	(3)	205	9	3583517
517	32.9	5.5	2.4	chr7	17160041	17160423	(142185550)	+	L4_A_Mam	LINE/RTE-X	4592	4987	(3)	3583518
263	24.6	9.1	6.0	chr7	17492634	17492750	(141853223)	+	MIR3	SINE/MIR	83	203	(5)	3583975
2119	14.9	4.2	8.8	chr7	20241738	20242216	(139103757)	+	MSTB2	LTR/ERVL-MaLR	1	456	(1)	3587488
2360	11.9	0.0	2.2	chr7	23433793	23434111	(135911862)	+	AluSx	SINE/Alu	1	312	(0)	3592334
25	6.7	3.8	5.5	chr7	23470542	23470594	(135875379)	+	GA-rich	Low_complexity	1	55	(0)	3592401
1853	24.4	7.8	0.2	chr7	23594878	23595341	(135750632)	+	MER65-int	LTR/ERV1	4370	4871	(0)	3592693
2640	14.2	5.4	2.1	chr7	23595342	23595771	(135750202)	+	MER65A	LTR/ERV1	1	445	(0)	3592693
1018	24.5	1.6	1.2	chr7	24896019	24896262	(134449711)	+	LTR82B	LTR/ERVL	524	768	(62)	3594545
797	22.9	4.3	0.0	chr7	24900063	24900241	(134445732)	+	MER5A	DNA/hAT-Charlie	3	189	(0)	3594553
2393	9.5	0.0	0.0	chr7	26156831	26157134	(133188839)	+	AluSc8	SINE/Alu	1	304	(7)	3596523
16	4.0	0.0	6.7	chr7	26291981	26292010	(133053963)	+	(CGC)n	Simple_repeat	1	30	(0)	3596789
13	22.8	0.0	0.0	chr7	26292040	26292075	(133053898)	+	(GCCCG)n	Simple_repeat	1	36	(0)	3596790
14	16.9	2.9	0.0	chr7	28621542	28621575	(130724398)	+	(GTTTT)n	Simple_repeat	1	35	(0)	3600322
11	23.9	6.1	0.0	chr7	33062650	33062698	(126283275)	+	(GCGCTC)n	Simple_repeat	1	52	(0)	3607294
682	22.4	8.2	6.5	chr7	35730164	35730425	(123615548)	C	MamTip1	DNA/hAT-Tip100	(0)	267	1	3611112
4655	16.1	4.1	4.0	chr7	37815550	37816502	(121529471)	C	L1MCa	LINE/L1	(5177)	1331	378	3614272
14	26.1	2.0	0.0	chr7	39465066	39465115	(119880858)	+	A-rich	Low_complexity	1	51	(0)	3616543
3083	22.5	2.5	0.6	chr7	41881406	41882125	(117463848)	C	Arthur1B	DNA/hAT-Tip100	(472)	753	20	3620473
12	29.2	0.0	3.7	chr7	42911707	42911760	(116434213)	+	(CGGCC)n	Simple_repeat	1	54	(0)	3621832
12	10.1	8.3	5.8	chr7	42911917	42911964	(116434009)	+	(GCACGCGA)n	Simple_repeat	1	52	(0)	3621833
2418	9.2	0.3	0.0	chr7	43055278	43055581	(116290392)	C	AluSx	SINE/Alu	(7)	305	1	3622040
37	19.7	1.4	8.3	chr7	43582939	43583085	(115762888)	+	G-rich	Low_complexity	1	136	(0)	3622832
819	21.1	1.1	8.2	chr7	43649660	43649855	(115696118)	+	MER91B	DNA/hAT-Tip100	6	187	(3)	3622928
31	18.7	4.1	3.9	chr7	44847977	44848074	(114497899)	+	(CGC)n	Simple_repeat	1	102	(0)	3625016
1731	18.3	3.1	5.0	chr7	46058512	46058909	(113287064)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	3626747
267	24.5	6.9	0.0	chr7	55309310	55309403	(104036570)	C	MIR	SINE/MIR	(68)	194	94	3638438
17	28.2	5.2	0.0	chr7	55964833	55964909	(103381064)	+	G-rich	Low_complexity	1	81	(0)	3639596
21	16.8	3.0	5.8	chr7	73557632	73557698	(85788275)	+	(CGC)n	Simple_repeat	1	69	(0)	3664904
13	17.4	5.3	5.0	chr7	73557829	73557885	(85788088)	+	(CGAGGTG)n	Simple_repeat	1	60	(0)	3664905
35	5.0	1.4	6.8	chr7	73667848	73667919	(85678054)	+	(CGGAG)n	Simple_repeat	1	73	(0)	3665208
13	14.1	10.3	3.1	chr7	73667942	73667999	(85677974)	+	G-rich	Low_complexity	1	64	(0)	3665209
200	31.5	8.9	4.2	chr7	74254882	74254977	(85090996)	C	MIRb	SINE/MIR	(44)	224	124	3666593
16	18.3	5.8	1.8	chr7	74289432	74289483	(85056490)	+	(CCGCT)n	Simple_repeat	1	55	(0)	3666690
12	12.0	3.7	0.0	chr7	75092733	75092759	(84253214)	+	(CGCGG)n	Simple_repeat	1	28	(0)	3668774
20	29.7	2.7	0.0	chr7	75092760	75092806	(84253167)	+	(CCG)n	Simple_repeat	2	77	(0)	3668775
13	27.0	1.6	3.2	chr7	76201662	76201722	(83144251)	+	G-rich	Low_complexity	1	62	(0)	3671569
15	24.5	0.0	3.9	chr7	76358446	76358497	(82987476)	+	(CCCGCG)n	Simple_repeat	1	52	(0)	3671937
1797	13.8	1.3	8.9	chr7	76379384	76379710	(82966263)	C	AluJo	SINE/Alu	(10)	302	1	3672004
326	33.8	6.8	0.7	chr7	87216895	87217046	(72128927)	+	MIRb	SINE/MIR	83	244	(24)	3686936
19	28.2	1.6	7.2	chr7	87876335	87876457	(71469516)	+	G-rich	Low_complexity	1	125	(0)	3687771
219	36.1	15.1	1.5	chr7	87933596	87933800	(71412173)	+	L2b	LINE/L2	3132	3369	(6)	3687845
13	20.9	3.8	3.6	chr7	88220048	88220100	(71125873)	+	(GCCCT)n	Simple_repeat	1	55	(0)	3688231
286	8.1	0.0	0.0	chr7	90242800	90242836	(69103137)	+	tRNA-Met-i	tRNA	1	37	(38)	3690805
304	33.8	10.0	0.0	chr7	90242844	90243041	(69102932)	C	L2	LINE/L2	(1243)	2176	1957	3690806
20	10.9	7.8	1.8	chr7	90596343	90596393	(68749580)	+	(GGC)n	Simple_repeat	1	55	(0)	3691355
13	9.8	0.0	0.0	chr7	90596516	90596537	(68749436)	+	(GAG)n	Simple_repeat	1	22	(0)	3691356
4207	12.9	0.6	1.9	chr7	94157450	94158091	(65187882)	C	MER41B	LTR/ERV1	(0)	634	1	3696236
1560	24.5	11.0	5.3	chr7	98130961	98131638	(61214335)	C	L1MC5	LINE/L1	(5)	9299	8579	3701988
449	23.0	8.6	8.0	chr7	98131641	98131791	(61214182)	C	MER58B	DNA/hAT-Charlie	(188)	153	2	3701989
13	21.7	0.0	2.6	chr7	98878848	98878886	(60467087)	+	(GCGCTCG)n	Simple_repeat	1	39	(0)	3703633
21	9.8	0.0	0.0	chr7	99408550	99408582	(59937391)	+	(GCG)n	Simple_repeat	1	33	(0)	3704671
45	2.3	0.0	0.0	chr7	100673816	100673860	(58672113)	+	(CGC)n	Simple_repeat	1	45	(0)	3707120
13	17.9	7.7	1.8	chr7	100896989	100897040	(58448933)	+	(GTGCG)n	Simple_repeat	1	56	(0)	3707589
15	22.8	7.5	2.3	chr7	100966449	100966481	(58379492)	+	(GGCGCT)n	Simple_repeat	1	52	(34)	3707725
16	11.6	0.0	0.0	chr7	100966482	100966509	(58379464)	+	(GCT)n	Simple_repeat	1	28	(0)	3707726
15	22.8	7.5	2.3	chr7	100966510	100966528	(58379445)	+	(GGCGCT)n	Simple_repeat	53	86	(0)	3707725
12	19.8	2.3	4.4	chr7	100966552	100966595	(58379378)	+	G-rich	Low_complexity	1	45	(0)	3707727
218	25.0	14.0	4.8	chr7	101252159	101252242	(58093731)	+	L2c	LINE/L2	3294	3386	(1)	3708330
323	32.7	7.8	0.0	chr7	102390634	102390786	(56955187)	C	MIRb	SINE/MIR	(28)	240	75	3710899
15	23.2	1.3	7.8	chr7	102433626	102433701	(56912272)	+	G-rich	Low_complexity	1	77	(0)	3710998
2284	8.2	0.0	0.0	chr7	102443707	102443986	(56901987)	C	AluSx1	SINE/Alu	(12)	300	21	3711025
288	32.3	5.8	0.0	chr7	104945439	104945568	(54400405)	C	MIR3	SINE/MIR	(20)	188	51	3714875
45	2.3	0.0	0.0	chr7	105014152	105014196	(54331777)	+	(GCC)n	Simple_repeat	1	45	(0)	3715005
18	16.4	0.0	2.7	chr7	105521971	105522021	(53823952)	+	G-rich	Low_complexity	1	49	(0)	3716041
368	29.9	14.4	8.3	chr7	107580185	107580571	(51765402)	C	L1M4b	LINE/L1	(6263)	604	190	3719278
427	19.1	9.3	2.9	chr7	107899005	107899144	(51446829)	C	L1ME2z	LINE/L1	(0)	6444	6295	3719806
325	30.5	12.7	3.9	chr7	111083560	111083788	(48262185)	+	MIRb	SINE/MIR	17	268	(0)	3723867
16	9.7	0.0	0.0	chr7	112449827	112449848	(46896125)	+	(G)n	Simple_repeat	1	22	(0)	3725833
377	35.8	6.3	9.1	chr7	114916523	114916863	(44429110)	+	L2b	LINE/L2	3036	3366	(9)	3729023
11	11.3	6.9	0.0	chr7	116862408	116862436	(42483537)	+	(CACGCG)n	Simple_repeat	1	31	(0)	3731664
16	4.5	0.0	0.0	chr7	116862569	116862591	(42483382)	+	(GCC)n	Simple_repeat	1	23	(0)	3731665
16398	9.8	9.3	0.7	chr7	117345700	117348798	(41997175)	C	L1PB1	LINE/L1	(3446)	3416	1	3732415
17	19.2	0.0	0.0	chr7	117873334	117873369	(41472604)	+	(CCG)n	Simple_repeat	1	36	(0)	3733127
197	33.9	8.4	3.5	chr7	120615974	120616086	(38729887)	+	L2c	LINE/L2	3260	3378	(9)	3736614
381	12.7	11.2	0.0	chr7	126657302	126657372	(32688601)	C	MADE1	DNA/TcMar-Mariner	(0)	80	1	3744713
247	25.0	1.5	0.0	chr7	126657537	126657600	(32688373)	C	Charlie15b	DNA/hAT-Charlie	(182)	879	815	3744714
2351	15.4	11.0	0.5	chr7	126658791	126659239	(32686734)	C	LTR22C0	LTR/ERVK	(0)	502	1	3744715
363	25.6	3.5	6.8	chr7	126659427	126659602	(32686371)	C	L1ME4a	LINE/L1	(1)	6123	5954	3744716
3095	17.3	0.3	5.4	chr7	126696840	126697537	(32648436)	+	L1MA9	LINE/L1	5613	6274	(38)	3744758
20	29.6	0.0	3.6	chr7	127392070	127392152	(31953821)	+	G-rich	Low_complexity	1	83	(0)	3745667
18	23.0	8.5	3.1	chr7	127392851	127392968	(31953005)	+	(GCCGAGG)n	Simple_repeat	1	128	(0)	3745668
18	14.0	0.0	0.0	chr7	129611701	129611732	(29734241)	+	(CGG)n	Simple_repeat	1	32	(0)	3749522
13	21.0	3.2	6.2	chr7	129611757	129611818	(29734155)	+	(AGGCGC)n	Simple_repeat	1	64	(0)	3749523
233	23.7	1.7	0.0	chr7	129785194	129785252	(29560721)	+	Charlie24	DNA/hAT-Charlie	2380	2439	(11)	3749827
401	29.1	10.1	4.4	chr7	129785406	129785563	(29560410)	+	MIRc	SINE/MIR	74	241	(27)	3749828
12	7.2	2.9	8.3	chr7	131106094	131106128	(28239845)	+	(CCGCC)n	Simple_repeat	1	36	(0)	3752133
31	5.9	0.0	0.0	chr7	134293129	134293164	(25052809)	+	(CA)n	Simple_repeat	1	36	(0)	3757230
517	24.6	4.7	1.4	chr7	134995692	134995835	(24350138)	C	LTR86A1	LTR/ERVL	(142)	371	223	3758356
2620	17.2	3.1	2.4	chr7	134996044	134996550	(24349423)	C	LTR108a_Mam	LTR/ERVL	(0)	511	1	3758357
256	31.5	2.4	4.1	chr7	135211094	135211262	(24134711)	+	MIR3	SINE/MIR	1	166	(42)	3758572
26	25.8	1.3	1.3	chr7	135509714	135509790	(23836183)	+	GA-rich	Low_complexity	1	78	(0)	3759070
14	17.6	2.5	2.4	chr7	135662425	135662464	(23683509)	+	G-rich	Low_complexity	1	41	(0)	3759374
24	30.2	2.6	2.6	chr7	137846558	137846671	(21499302)	+	(GCC)n	Simple_repeat	1	117	(0)	3762478
6939	15.0	5.2	2.2	chr7	138025072	138026492	(21319481)	+	HERV35I-int	LTR/ERV1	5124	6496	(422)	3762749
15	4.3	4.2	0.0	chr7	138461132	138461155	(20884818)	+	(CCG)n	Simple_repeat	1	25	(0)	3763677
18	25.3	4.2	1.3	chr7	139035791	139035862	(20310111)	+	(CCGCCT)n	Simple_repeat	1	75	(0)	3764776
630	2.8	0.0	0.0	chr7	139340700	139340771	(20005202)	+	tRNA-Arg-AGG	tRNA	1	72	(4)	3765383
765	0.0	0.0	0.0	chr7	148941488	148941571	(10404402)	+	HY5	scRNA	1	84	(0)	3779656
792	4.3	0.0	0.0	chr7	148963315	148963407	(10382566)	+	HY4	scRNA	1	93	(0)	3779711
930	0.0	0.0	0.0	chr7	148983755	148983855	(10362118)	+	HY3	scRNA	1	101	(0)	3779765
1029	0.0	0.0	0.0	chr7	148987137	148987248	(10358725)	C	HY1	scRNA	(7)	112	1	3779772
12	21.6	5.6	5.3	chr7	149262051	149262121	(10083852)	+	(GCCGCGG)n	Simple_repeat	1	75	(0)	3780412
12	20.0	5.3	5.0	chr7	149873609	149873665	(9472308)	+	(CGGCG)n	Simple_repeat	1	60	(0)	3781258
13	13.1	2.7	5.3	chr7	150368687	150368723	(8977250)	+	(CGCCC)n	Simple_repeat	1	38	(0)	3781958
14	24.1	1.7	4.9	chr7	150368724	150368739	(8977234)	+	(GCGGCC)n	Simple_repeat	17	61	(0)	3781957
14	15.4	6.7	2.1	chr7	150368946	150368990	(8976983)	+	(GGCCGG)n	Simple_repeat	1	48	(0)	3781959
19	14.8	5.4	3.4	chr7	151519191	151519246	(7826727)	+	(CCCG)n	Simple_repeat	1	59	(0)	3783576
18	29.5	0.0	5.5	chr7	151519551	151519641	(7826332)	+	(GCGGCG)n	Simple_repeat	1	91	(0)	3783577
29	0.0	0.0	0.0	chr7	152436749	152436775	(6909198)	+	(CTCCGG)n	Simple_repeat	1	27	(0)	3785122
20	24.6	2.8	6.3	chr7	152464192	152464299	(6881674)	+	(GCCGGCC)n	Simple_repeat	1	111	(0)	3785186
12	23.8	2.2	2.1	chr7	152759939	152759984	(6585989)	+	(CGGCCC)n	Simple_repeat	1	47	(0)	3785946
345	29.5	8.0	2.7	chr7	155205477	155205664	(4140309)	C	MIR	SINE/MIR	(36)	226	28	3789348
240	21.1	9.5	0.0	chr7	155205813	155205888	(4140085)	+	Charlie1b	DNA/hAT-Charlie	307	390	(133)	3789349
16	26.6	1.7	1.6	chr7	155297434	155297493	(4048480)	+	G-rich	Low_complexity	1	61	(0)	3789476
12	17.6	0.0	5.6	chr7	157010779	157010814	(2335159)	+	(CCGCC)n	Simple_repeat	1	36	(0)	3791706
792	23.9	5.6	5.3	chr8	4106488	4106809	(141031827)	C	MER33	DNA/hAT-Charlie	(1)	323	1	3798951
1777	23.7	10.1	1.6	chr8	6426179	6426868	(138711768)	C	L1ME1	LINE/L1	(0)	6179	5378	3802059
1024	25.5	3.0	11.5	chr8	6428757	6429235	(138709401)	C	HAL1	LINE/L1	(19)	2488	2052	3802067
1420	18.5	0.8	3.0	chr8	8242590	8242856	(136895780)	C	MER57B2	LTR/ERV1	(28)	375	115	3804387
932	15.5	13.0	2.4	chr8	8242928	8243132	(136895504)	+	MER4B	LTR/ERV1	1	230	(380)	3804388
3917	13.7	3.0	1.1	chr8	11417598	11418219	(133720417)	C	MER41B	LTR/ERV1	(0)	634	1	3809560
606	33.4	12.6	4.4	chr8	11418220	11418784	(133719852)	+	L2	LINE/L2	1562	2170	(1249)	3809559
1782	15.2	5.3	1.4	chr8	17927125	17927414	(127211222)	C	AluSz	SINE/Alu	(10)	302	1	3818946
2147	12.4	0.7	0.0	chr8	17927559	17927848	(127210788)	C	AluSg	SINE/Alu	(18)	292	1	3818947
346	28.3	2.1	1.5	chr8	17933114	17933220	(127205416)	+	MIRb	SINE/MIR	158	262	(0)	3818959
27	6.1	0.0	0.0	chr8	22865357	22865391	(122273245)	+	(GGCGGT)n	Simple_repeat	1	35	(0)	3826943
2417	7.5	0.0	1.3	chr8	23225479	23225783	(121912853)	C	AluSg4	SINE/Alu	(8)	302	2	3827567
20	25.4	4.9	1.2	chr8	23457448	23457528	(121681108)	+	(GCCC)n	Simple_repeat	1	85	(0)	3827940
14	8.5	10.3	2.3	chr8	29348857	29348895	(115789741)	+	(GCG)n	Simple_repeat	1	43	(0)	3837753
185	22.1	6.1	6.1	chr8	29469469	29469550	(115669086)	+	MIR3	SINE/MIR	120	201	(7)	3837968
1048	29.3	6.0	2.7	chr8	29490056	29490494	(115648142)	C	L1MEi	LINE/L1	(1750)	462	9	3838007
198	36.4	1.8	0.9	chr8	29490517	29490627	(115648009)	C	L3	LINE/CR1	(661)	3438	3327	3838008
184	31.2	1.3	3.8	chr8	29524491	29524570	(115614066)	+	L2	LINE/L2	258	335	(3084)	3838068
1024	15.0	13.8	6.5	chr8	30156019	30156121	(114982515)	C	AluJr	SINE/Alu	(177)	135	31	3839159
14	11.6	0.0	3.3	chr8	30156267	30156296	(114982340)	+	(CCCCG)n	Simple_repeat	1	30	(0)	3839161
13	20.3	0.0	4.7	chr8	30658004	30658046	(114480590)	+	(CCGCCT)n	Simple_repeat	1	43	(0)	3840123
26	14.5	0.0	0.0	chr8	30658138	30658183	(114480453)	+	(GGC)n	Simple_repeat	1	46	(0)	3840124
11	17.2	7.7	0.0	chr8	30727772	30727810	(114410826)	+	(CGCGCGC)n	Simple_repeat	1	42	(0)	3840308
847	7.4	0.0	0.0	chr8	33513474	33513581	(111625055)	+	U13	snRNA	1	108	(0)	3844636
1912	9.7	7.3	0.4	chr8	33513741	33514019	(111624617)	C	AluSc	SINE/Alu	(9)	300	1	3844637
699	24.6	15.4	12.2	chr8	37267466	37267989	(107870647)	C	MLT1H1	LTR/ERVL-MaLR	(10)	545	7	3850065
2102	10.0	3.5	0.4	chr8	37889793	37890071	(107248565)	C	AluSx1	SINE/Alu	(11)	301	14	3851152
13	12.7	0.0	0.0	chr8	38231750	38231775	(106906861)	+	(CCGCC)n	Simple_repeat	1	26	(0)	3851937
16	7.0	10.0	0.0	chr8	38787121	38787156	(106351480)	+	(GC)n	Simple_repeat	1	39	(0)	3852978
25	18.1	1.3	5.2	chr8	38787224	38787299	(106351337)	+	G-rich	Low_complexity	1	77	(0)	3852979
2252	10.7	1.6	1.0	chr8	38958043	38958351	(106180285)	+	AluSx1	SINE/Alu	1	311	(1)	3853278
1364	14.4	0.4	10.6	chr8	41528480	41528771	(103609865)	+	AluJr	SINE/Alu	35	296	(16)	3857156
1542	13.7	1.0	13.4	chr8	41703452	41703786	(103434850)	C	AluJr	SINE/Alu	(15)	297	5	3857458
15	25.2	1.2	7.3	chr8	42153361	42153441	(102985195)	+	(GCGCCT)n	Simple_repeat	1	82	(0)	3858238
473	26.3	6.0	10.7	chr8	42292733	42293013	(102845623)	+	MIRb	SINE/MIR	2	268	(0)	3858530
22	12.7	9.6	2.5	chr8	42541714	42541786	(102596850)	+	(CCCCGCGT)n	Simple_repeat	1	80	(0)	3858983
15	19.9	0.0	0.0	chr8	42541757	42541791	(102596845)	+	(CCCGG)n	Simple_repeat	1	35	(0)	3858984
18	16.4	5.2	3.3	chr8	43056172	43056229	(102082407)	+	(CGCAGCC)n	Simple_repeat	1	61	(0)	3860029
13	18.5	7.0	0.0	chr8	43056407	43056449	(102082187)	+	(CAGCCC)n	Simple_repeat	1	46	(0)	3860030
1583	14.6	3.9	1.4	chr8	43093803	43094077	(102044559)	+	AluJb	SINE/Alu	1	282	(30)	3860104
1040	26.8	8.6	3.9	chr8	47377304	47377826	(97760810)	C	MER68	LTR/ERVL	(0)	604	20	3861858
4086	17.5	4.9	0.7	chr8	53767533	53768942	(91369694)	+	L1MB8	LINE/L1	4696	6166	(12)	3869891
1730	22.2	7.2	1.4	chr8	53768946	53769581	(91369055)	+	L1M5	LINE/L1	4824	5519	(925)	3869899
3794	19.5	4.3	1.6	chr8	53944746	53945626	(91193010)	+	L1MB7	LINE/L1	5270	6175	(9)	3870182
23	10.0	2.1	4.2	chr8	56993637	56993683	(88144953)	+	(CCG)n	Simple_repeat	1	48	(0)	3874703
1646	28.6	8.2	5.9	chr8	57420606	57421066	(87717570)	C	LTR43-int	LTR/ERV1	(4331)	467	1	3875284
682	31.1	13.0	2.4	chr8	60916294	60916779	(84221857)	C	L2c	LINE/L2	(37)	3350	2798	3879881
41	6.4	0.0	0.0	chr8	60916780	60916828	(84221808)	+	(TG)n	Simple_repeat	1	49	(0)	3879882
565	29.6	16.0	2.7	chr8	60916829	60917171	(84221465)	C	L2c	LINE/L2	(622)	2797	2407	3879881
16	0.0	0.0	0.0	chr8	60926707	60926726	(84211910)	+	(GCA)n	Simple_repeat	1	20	(0)	3879899
12	24.9	1.9	3.8	chr8	60947507	60947558	(84191078)	+	(TCAGTT)n	Simple_repeat	1	53	(0)	3879940
10608	17.2	7.2	3.4	chr8	62887135	62888674	(82249962)	C	L1MC1	LINE/L1	(4928)	1580	10	3882426
1148	23.2	9.5	12.6	chr8	63199931	63200389	(81938247)	C	MLT1F2	LTR/ERVL-MaLR	(0)	560	118	3882887
619	34.5	5.4	0.9	chr8	64695066	64695381	(80443255)	+	LFSINE_Vert	SINE/tRNA	43	373	(86)	3884809
16	5.5	10.0	2.3	chr8	65842097	65842164	(79296472)	+	(GCGCCCA)n	Simple_repeat	1	73	(0)	3886500
543	0.0	0.0	21.5	chr8	66113367	66113459	(79025177)	+	tRNA-Tyr-TAC	tRNA	1	73	(3)	3886877
563	0.0	0.0	18.0	chr8	66113988	66114076	(79024560)	+	tRNA-Tyr-TAC	tRNA	1	73	(3)	3886878
588	6.8	0.0	0.0	chr8	66114189	66114261	(79024375)	+	tRNA-Ala-GCY	tRNA	1	73	(3)	3886879
26	0.0	0.0	0.0	chr8	69832995	69833019	(75305617)	+	(CCG)n	Simple_repeat	1	25	(0)	3892657
1980	11.6	3.2	5.5	chr8	70625819	70626165	(74512471)	C	MER44A	DNA/TcMar-Tigger	(0)	339	1	3894146
319	26.3	3.5	9.1	chr8	70626166	70626345	(74512291)	+	L2	LINE/L2	2273	2439	(980)	3894145
207	39.4	4.5	1.2	chr8	71831482	71831653	(73306983)	+	L2c	LINE/L2	2541	2718	(701)	3895734
38	24.8	3.0	4.7	chr8	73746880	73747045	(71391591)	+	(CCCCGC)n	Simple_repeat	1	171	(0)	3898434
19	3.9	0.0	0.0	chr8	75558480	75558506	(69580130)	+	(TTGTT)n	Simple_repeat	1	27	(0)	3901174
425	25.6	9.3	0.0	chr8	80085334	80085470	(65053166)	+	Helitron3Na_Mam	RC/Helitron	5	155	(331)	3906984
27	15.9	1.7	1.7	chr8	80171332	80171405	(64967231)	+	(AGCCCA)n	Simple_repeat	1	74	(0)	3907148
515	31.2	8.2	2.0	chr8	80435944	80436252	(64702384)	+	L2c	LINE/L2	2840	3168	(219)	3907779
3039	14.3	0.8	0.4	chr8	83317861	83318353	(61820283)	+	LOR1a	LTR/ERV1	1	495	(2)	3911744
1047	32.4	10.7	5.2	chr8	88657360	88658061	(56480575)	C	ERVL-E-int	LTR/ERVL	(2412)	3255	2510	3918902
3925	9.3	3.1	0.0	chr8	89805158	89805694	(55332942)	+	MER41A	LTR/ERV1	1	554	(0)	3920291
2398	9.3	0.0	0.6	chr8	95115857	95116169	(50022467)	+	AluSx	SINE/Alu	2	312	(0)	3928225
16	18.5	0.0	2.6	chr8	95133990	95134028	(50004608)	+	(CGC)n	Simple_repeat	1	39	(0)	3928265
788	0.0	0.0	0.0	chr8	95269657	95269738	(49868898)	C	tRNA-Ser-TCY	tRNA	(3)	82	1	3928507
269	22.3	12.3	5.1	chr8	97597184	97597336	(47541300)	+	L1ME4b	LINE/L1	465	641	(283)	3931968
533	29.3	7.9	3.1	chr8	97597360	97597588	(47541048)	+	MIR	SINE/MIR	11	251	(11)	3931969
2236	12.5	0.0	0.3	chr8	97630996	97631308	(47507328)	C	AluSz	SINE/Alu	(0)	312	1	3932045
13	21.3	0.0	0.0	chr8	99012974	99013006	(46125630)	+	(GCCGCA)n	Simple_repeat	1	33	(0)	3934592
15	9.7	0.0	0.0	chr8	100150590	100150611	(44988025)	+	(AG)n	Simple_repeat	1	22	(0)	3936243
48	4.2	0.0	0.0	chr8	100494721	100494770	(44643866)	+	(AC)n	Simple_repeat	1	50	(0)	3936891
13	5.3	0.0	0.0	chr8	101790916	101790935	(43347701)	+	(CAG)n	Simple_repeat	1	20	(0)	3939333
17	18.9	2.8	0.0	chr8	101791112	101791147	(43347489)	+	(TG)n	Simple_repeat	1	37	(0)	3939334
2279	12.6	0.3	0.0	chr8	101911348	101911656	(43226980)	C	AluSz	SINE/Alu	(2)	310	1	3939501
282	33.0	2.0	0.0	chr8	102529282	102529381	(42609255)	+	LTR85b	LTR/Gypsy?	471	572	(212)	3940565
243	29.5	12.2	5.2	chr8	102529413	102529548	(42609088)	+	LTR85b	LTR/Gypsy?	551	697	(5)	3940565
14	12.2	0.0	0.0	chr8	102961505	102961531	(42177105)	+	(CCTCC)n	Simple_repeat	1	27	(0)	3941477
9541	14.4	1.5	3.5	chr8	104273234	104274878	(40863758)	C	LOR1-int	LTR/ERV1	(1276)	6844	5233	3943461
567	30.2	13.5	4.6	chr8	108326405	108326727	(36811909)	C	L2c	LINE/L2	(12)	3375	3020	3949201
16	15.2	0.0	5.0	chr8	109644662	109644701	(35493935)	+	(CGC)n	Simple_repeat	1	40	(0)	3951138
14	9.6	0.0	0.0	chr8	109644792	109644814	(35493822)	+	(CGC)n	Simple_repeat	1	23	(0)	3951139
198	34.8	3.2	1.1	chr8	115185488	115185580	(29953056)	+	MIR1_Amn	SINE/MIR	17	111	(119)	3958345
19	0.0	0.0	6.5	chr8	117439911	117439941	(27698695)	+	(AAAAC)n	Simple_repeat	1	31	(0)	3961614
212	36.6	2.1	0.0	chr8	117520346	117520438	(27618198)	+	MIR	SINE/MIR	20	114	(148)	3961723
774	27.7	9.2	1.2	chr8	118959324	118959564	(26179072)	+	MIR	SINE/MIR	1	262	(0)	3964121
680	2.7	0.0	0.0	chr8	123157229	123157302	(21981334)	C	tRNA-Met_	tRNA	(2)	74	1	3971276
18	23.0	0.0	5.9	chr8	124475020	124475087	(20663549)	+	(CCCGCC)n	Simple_repeat	1	68	(0)	3973783
15	19.9	2.5	0.0	chr8	124475055	124475094	(20663542)	+	(GCCCT)n	Simple_repeat	1	41	(0)	3973784
1302	13.0	17.1	2.2	chr8	124757225	124757491	(20381145)	C	Tigger4	DNA/TcMar-Tigger	(2416)	315	1	3974272
737	19.0	6.1	1.2	chr8	125417561	125417733	(19720903)	+	MIRb	SINE/MIR	60	247	(21)	3975546
306	32.4	18.4	1.9	chr8	130008989	130009196	(15129440)	C	MIRb	SINE/MIR	(17)	251	2	3984172
420	22.0	6.2	3.2	chr8	131816653	131816807	(13321829)	C	MER112	DNA/hAT-Charlie	(7)	254	95	3987481
743	24.0	1.0	3.5	chr8	133499059	133499257	(11639379)	+	MIRb	SINE/MIR	2	201	(67)	3990571
463	30.1	14.5	0.0	chr8	133794390	133794595	(11344041)	+	MIR	SINE/MIR	20	260	(2)	3991212
11	18.1	2.4	4.8	chr8	134713228	134713268	(10425368)	+	(TCCGGAG)n	Simple_repeat	1	42	(0)	3992734
251	28.7	4.4	6.9	chr8	134713321	134713436	(10425200)	+	MIRc	SINE/MIR	28	140	(128)	3992735
243	34.9	4.4	4.2	chr8	135923098	135923287	(9215349)	C	L2a	LINE/L2	(110)	3277	3084	3994801
404	23.9	4.0	3.4	chr8	136071068	136071214	(9067422)	+	L1ME3D	LINE/L1	5742	5889	(353)	3995050
329	33.3	9.1	2.6	chr8	136071227	136071608	(9067028)	+	MamRep1527	LTR	470	878	(91)	3995051
663	28.3	1.6	1.6	chr8	136487420	136487606	(8651030)	+	MLT1I	LTR/ERVL-MaLR	1	187	(224)	3995732
314	35.6	1.3	0.0	chr8	137934199	137934347	(7204289)	+	MIRc	SINE/MIR	114	264	(4)	3997917
99	20.1	6.1	3.9	chr8	140457828	140458190	(4680446)	+	GA-rich	Low_complexity	1	385	(0)	4001984
13	17.1	3.0	0.0	chr8	141090106	141090138	(4048498)	+	(AGACGG)n	Simple_repeat	1	34	(0)	4003161
21	13.7	0.0	7.1	chr8	141128535	141128590	(4010046)	+	(GCCCC)n	Simple_repeat	1	56	(0)	4003236
13	21.5	3.4	4.9	chr8	141128648	141128706	(4009930)	+	G-rich	Low_complexity	1	61	(0)	4003237
23	21.5	3.6	7.0	chr8	142669794	142669904	(2468732)	+	(CCCG)n	Simple_repeat	1	115	(0)	4005161
11	33.6	0.0	0.0	chr8	143568578	143568626	(1570010)	+	(GCAGCA)n	Simple_repeat	1	49	(0)	4006348
13	15.4	0.0	3.2	chr8	143597733	143597763	(1540873)	+	G-rich	Low_complexity	1	31	(0)	4006369
16	16.1	2.8	1.4	chr8	143617538	143617580	(1521056)	+	G-rich	Low_complexity	1	43	(0)	4006383
14	7.8	0.0	6.5	chr8	143829032	143829062	(1309574)	+	(CGCCC)n	Simple_repeat	1	31	(0)	4006715
14	24.7	0.0	5.2	chr8	143990143	143990200	(1148436)	+	(CACCGGC)n	Simple_repeat	1	58	(0)	4006925
25	23.7	0.0	7.8	chr8	143990327	143990429	(1148207)	+	(CGG)n	Simple_repeat	1	103	(0)	4006926
15	10.3	3.0	2.9	chr8	144103719	144103751	(1034885)	+	(GCC)n	Simple_repeat	1	34	(0)	4007110
13	14.7	3.3	0.0	chr8	144853441	144853470	(285166)	+	(GGAGC)n	Simple_repeat	1	31	(0)	4008203
411	15.9	5.8	2.3	chr8	144853539	144853640	(284996)	C	LTR54	LTR/ERV1	(391)	107	1	4008204
195	29.7	5.9	0.0	chr9	859536	859599	(137535118)	+	MER131	DNA?	129	196	(19)	4009896
22	35.2	0.0	1.2	chr9	894240	894336	(137500381)	+	(CA)n	Simple_repeat	1	95	(0)	4009960
312	35.9	0.0	0.0	chr9	1267075	1267191	(137127526)	+	ERV3-16A3_I-int	LTR/ERVL	3207	3323	(2344)	4010522
1155	31.4	6.6	0.7	chr9	1267217	1267774	(137126943)	+	ERV3-16A3_I-int	LTR/ERVL	3391	3983	(1684)	4010522
697	30.9	7.6	1.8	chr9	1939877	1940100	(136454617)	C	MIRb	SINE/MIR	(28)	240	3	4011453
20	18.9	2.4	0.0	chr9	2017521	2017562	(136377155)	+	(GT)n	Simple_repeat	1	43	(0)	4011563
18	23.9	1.9	0.0	chr9	2017563	2017574	(136377143)	+	(GTGTGC)n	Simple_repeat	1	55	(0)	4011564
14	24.2	0.0	0.0	chr9	2017664	2017702	(136377015)	+	G-rich	Low_complexity	1	39	(0)	4011565
2230	9.0	0.0	0.0	chr9	4762356	4762634	(133632083)	+	AluSc8	SINE/Alu	1	279	(32)	4015628
15	0.0	0.0	0.0	chr9	4762635	4762651	(133632066)	+	(AC)n	Simple_repeat	1	17	(0)	4015629
3722	20.3	3.8	0.6	chr9	4814567	4815462	(133579255)	C	L1MA5	LINE/L1	(4029)	3139	2214	4015711
873	22.3	8.7	2.8	chr9	5590276	5590566	(132804151)	C	MER5C	DNA/hAT-Charlie	(2)	311	2	4016738
17	14.2	0.0	0.0	chr9	5629194	5629224	(132765493)	+	(GCC)n	Simple_repeat	1	31	(0)	4016815
12	12.6	0.0	3.6	chr9	6413413	6413440	(131981277)	+	(GCGGC)n	Simple_repeat	1	28	(0)	4017979
2231	11.0	0.7	0.0	chr9	6682364	6682673	(131712044)	+	AluSp	SINE/Alu	1	312	(1)	4018488
2606	4.7	0.0	0.0	chr9	6682903	6683200	(131711517)	C	AluY	SINE/Alu	(13)	298	1	4018489
209	34.2	7.1	5.7	chr9	6683299	6683422	(131711295)	+	MIRb	SINE/MIR	120	245	(23)	4018490
14	13.7	3.1	0.0	chr9	15511251	15511282	(122883435)	+	(TGTGTA)n	Simple_repeat	1	33	(0)	4030659
260	23.5	5.7	10.4	chr9	17863537	17863772	(120530945)	C	MLT1I	LTR/ERVL-MaLR	(125)	286	94	4033910
2181	8.1	0.0	6.2	chr9	19380563	19380869	(119013848)	+	AluSx1	SINE/Alu	1	288	(24)	4036215
2337	9.9	0.0	1.3	chr9	20640022	20640333	(117754384)	C	AluSz	SINE/Alu	(4)	308	1	4038171
965	26.0	19.3	3.9	chr9	20640334	20640798	(117753919)	+	MLT1G3	LTR/ERVL-MaLR	40	577	(2)	4038170
13	29.4	1.3	5.3	chr9	21335468	21335551	(117059166)	+	G-rich	Low_complexity	1	80	(0)	4039097
586	30.6	1.1	1.1	chr9	26727546	26727727	(111666990)	C	MIRb	SINE/MIR	(7)	261	80	4046043
11	22.3	0.0	6.4	chr9	27366050	27366096	(111028621)	+	G-rich	Low_complexity	1	47	(0)	4047030
1279	27.2	3.9	9.5	chr9	27792975	27793597	(110601120)	+	L1MEg1	LINE/L1	2	487	(5748)	4047668
2435	14.3	4.5	1.4	chr9	33560111	33560539	(104834178)	C	MER61C	LTR/ERV1	(0)	428	1	4055668
2599	19.2	1.2	4.7	chr9	33560540	33560678	(104834039)	C	L1MB8	LINE/L1	(342)	5836	5703	4055667
1628	10.6	2.1	0.8	chr9	35657504	35657740	(102736977)	+	AluJb	SINE/Alu	1	240	(72)	4059251
15	20.0	6.0	5.7	chr9	36572773	36572855	(101821862)	+	(GTCCGC)n	Simple_repeat	1	88	(0)	4061005
19	17.5	2.7	7.8	chr9	37027606	37027680	(101367037)	+	(GCC)n	Simple_repeat	1	77	(0)	4061903
499	20.1	6.4	3.8	chr9	37409297	37409464	(100985253)	+	MIRb	SINE/MIR	30	214	(54)	4062609
241	20.2	3.1	4.5	chr9	38088601	38088674	(100306043)	+	MIR3	SINE/MIR	82	157	(73)	4063908
1155	27.2	7.2	1.3	chr9	38088866	38089335	(100305382)	C	ORSL-2b	DNA/hAT-Tip100	(0)	508	9	4063909
14	10.0	6.2	0.0	chr9	69035827	69035858	(69358859)	+	(ACCCAG)n	Simple_repeat	1	34	(0)	4080839
23	19.6	4.7	0.0	chr9	69035970	69036033	(69358684)	+	(GCCGCAC)n	Simple_repeat	1	67	(0)	4080840
19	20.6	0.0	0.0	chr9	69174299	69174343	(69220374)	+	(AGCAGG)n	Simple_repeat	1	45	(0)	4081172
1810	15.4	2.1	2.5	chr9	72443178	72443463	(65951254)	C	AluSz	SINE/Alu	(21)	291	7	4086541
1425	22.7	9.1	0.3	chr9	72443547	72443895	(65950822)	C	MER63D	DNA/hAT-Blackjack	(677)	384	2	4086542
3441	16.9	4.7	2.1	chr9	82726442	82727058	(55667659)	C	MER41B	LTR/ERV1	(0)	634	1	4101842
602	15.0	2.0	0.0	chr9	84296250	84296349	(54098368)	+	LTR32	LTR/ERVL	228	329	(128)	4104408
535	29.0	9.1	1.8	chr9	84694115	84694339	(53700378)	+	MIRb	SINE/MIR	10	252	(16)	4105102
51	0.0	0.0	0.0	chr9	84709962	84710005	(53684712)	+	(TG)n	Simple_repeat	1	44	(0)	4105124
31	14.4	1.6	1.6	chr9	85741887	85741949	(52652768)	+	(CGG)n	Simple_repeat	1	64	(0)	4106656
21	24.9	2.0	0.0	chr9	89406173	89406223	(48988494)	+	(CA)n	Simple_repeat	1	52	(0)	4112467
42	0.0	0.0	0.0	chr9	90924127	90924162	(47470555)	+	(GT)n	Simple_repeat	1	36	(0)	4114454
351	19.8	5.6	3.8	chr9	94168268	94168372	(44226345)	+	Charlie9	DNA/hAT-Charlie	5	111	(2646)	4119127
413	28.9	11.8	1.3	chr9	94860895	94861045	(43533672)	+	MIR3	SINE/MIR	37	205	(3)	4120405
30	26.7	1.9	6.7	chr9	95508226	95508387	(42886330)	+	(CCG)n	Simple_repeat	1	165	(0)	4121305
21	16.2	2.8	6.8	chr9	96417538	96417608	(41977109)	+	(CCGC)n	Simple_repeat	1	73	(0)	4122831
259	21.1	0.0	6.6	chr9	96419486	96419546	(41975171)	+	L2c	LINE/L2	3331	3387	(0)	4122834
27	12.0	0.0	0.0	chr9	97412046	97412091	(40982626)	+	(GCGGG)n	Simple_repeat	1	46	(0)	4124478
1934	8.8	10.6	0.0	chr9	98205995	98206255	(40188462)	C	AluSc	SINE/Alu	(17)	292	1	4126065
877	28.3	11.4	8.0	chr9	99181497	99181984	(39212733)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	6	4127977
21	24.1	0.0	1.7	chr9	105244524	105244583	(33150134)	+	G-rich	Low_complexity	1	60	(0)	4137223
1524	5.5	3.5	3.0	chr9	105696301	105696500	(32698217)	C	AluSx1	SINE/Alu	(25)	287	87	4137935
420	18.3	3.8	7.3	chr9	105696503	105696570	(32698147)	+	Charlie1a	DNA/hAT-Charlie	1251	1316	(139)	4137936
1759	14.1	16.8	1.6	chr9	105696571	105696952	(32697765)	C	LTR47A	LTR/ERVL	(0)	452	1	4137937
424	33.2	3.6	3.6	chr9	106981371	106981595	(31413122)	+	MIRb	SINE/MIR	26	250	(18)	4139825
469	35.6	2.8	1.9	chr9	106981685	106981896	(31412821)	+	L3b	LINE/CR1	4758	4971	(261)	4139826
462	34.2	12.5	4.7	chr9	107759420	107759802	(30634915)	C	L2b	LINE/L2	(9)	3378	2962	4141529
306	25.7	9.5	3.2	chr9	109401284	109401440	(28993277)	C	MER5A	DNA/hAT-Charlie	(19)	170	3	4144430
17	27.7	1.4	2.9	chr9	111037976	111038044	(27356673)	+	(CACCCG)n	Simple_repeat	1	70	(0)	4147191
513	24.9	18.6	3.8	chr9	111078862	111079070	(27315647)	C	MIRb	SINE/MIR	(15)	253	3	4147264
294	22.2	12.2	0.0	chr9	111148340	111148447	(27246270)	C	MLT1O	LTR/ERVL-MaLR	(1)	541	419	4147393
13	27.4	0.0	6.2	chr9	111484194	111484257	(26910460)	+	G-rich	Low_complexity	1	64	(0)	4147933
600	32.2	6.0	0.4	chr9	113578788	113579021	(24815696)	C	MIRc	SINE/MIR	(0)	268	21	4151947
237	16.4	3.3	3.7	chr9	113579165	113579232	(24815485)	+	MIRb	SINE/MIR	40	112	(156)	4151948
262	25.9	17.8	1.4	chr9	114385854	114385998	(24008719)	+	MIRc	SINE/MIR	12	185	(83)	4153553
433	30.6	20.9	1.9	chr9	114390315	114391040	(24003677)	+	L2b	LINE/L2	2445	3369	(6)	4153564
449	29.2	5.4	1.4	chr9	114391070	114391255	(24003462)	C	MIR	SINE/MIR	(67)	195	14	4153565
14	22.9	4.3	0.0	chr9	114989822	114989867	(23404850)	+	(CTCT)n	Simple_repeat	1	48	(0)	4154806
183	19.4	2.7	0.0	chr9	115524686	115524721	(22869996)	C	OldhAT1	DNA/hAT-Ac	(861)	1987	1951	4155729
200	28.6	4.1	0.0	chr9	115524739	115524808	(22869909)	+	MIRb	SINE/MIR	179	251	(17)	4155730
883	22.5	1.9	0.9	chr9	120927315	120927524	(17467193)	+	MIRb	SINE/MIR	24	241	(27)	4166012
761	22.4	6.6	3.4	chr9	120928058	120928233	(17466484)	C	MIR	SINE/MIR	(39)	223	42	4166013
265	18.5	7.1	4.4	chr9	121202235	121202302	(17192415)	C	MIRb	SINE/MIR	(11)	257	188	4166478
381	23.2	1.2	0.0	chr9	121202366	121202465	(17192252)	C	MIRc	SINE/MIR	(87)	181	73	4166478
486	29.4	9.0	6.2	chr9	121249750	121250072	(17144645)	+	MLT1O	LTR/ERVL-MaLR	112	444	(98)	4166591
37	33.8	1.4	3.7	chr9	122093034	122093247	(16301470)	+	(CCG)n	Simple_repeat	1	217	(0)	4168287
15	16.4	2.9	0.0	chr9	123268205	123268238	(15126479)	+	(GCG)n	Simple_repeat	1	35	(0)	4170358
29	18.5	2.6	2.5	chr9	123929804	123929880	(14464837)	+	(CCCGG)n	Simple_repeat	1	79	(0)	4171512
14	24.8	1.3	7.7	chr9	123929927	123930003	(14464714)	+	(GCCC)n	Simple_repeat	1	78	(0)	4171513
12	5.5	0.0	0.0	chr9	123930054	123930072	(14464645)	+	(CGC)n	Simple_repeat	1	19	(0)	4171514
242	33.3	11.7	1.1	chr9	124871270	124871445	(13523272)	+	MIRb	SINE/MIR	65	261	(7)	4173433
372	33.1	10.4	1.2	chr9	124871439	124871683	(13523034)	+	MIRb	SINE/MIR	5	265	(3)	4173434
248	36.4	10.6	1.8	chr9	125634771	125634994	(12759723)	C	MIRc	SINE/MIR	(17)	251	6	4175015
29	29.4	0.9	2.6	chr9	126860601	126860713	(11534004)	+	G-rich	Low_complexity	1	114	(0)	4177201
19	23.6	0.0	8.1	chr9	126914809	126914895	(11479822)	+	(CGGCC)n	Simple_repeat	1	87	(0)	4177309
200	30.9	4.7	1.2	chr9	127451080	127451161	(10943556)	C	MIR3	SINE/MIR	(43)	165	81	4178232
26	9.9	0.0	0.0	chr9	127785879	127785921	(10608796)	+	(GGC)n	Simple_repeat	1	43	(0)	4179014
26	21.7	2.4	3.5	chr9	127802798	127802882	(10591835)	+	(GGCGG)n	Simple_repeat	1	87	(0)	4179046
15	17.7	2.6	0.0	chr9	128068136	128068173	(10326544)	+	G-rich	Low_complexity	1	39	(0)	4179701
19	13.8	1.9	5.6	chr9	128068267	128068319	(10326398)	+	(CCGCGC)n	Simple_repeat	1	54	(0)	4179702
18	9.3	2.8	2.7	chr9	128068350	128068385	(10326332)	+	(GCC)n	Simple_repeat	1	37	(0)	4179703
13	19.4	0.0	2.7	chr9	128191414	128191450	(10203267)	+	(CCGCCC)n	Simple_repeat	1	37	(0)	4179938
13	8.5	0.0	14.0	chr9	128552779	128552828	(9841889)	+	(GGCGG)n	Simple_repeat	1	50	(0)	4180818
15	8.9	0.0	0.0	chr9	128689232	128689255	(9705462)	+	(AGG)n	Simple_repeat	1	24	(0)	4181103
17	9.7	2.9	2.8	chr9	128689312	128689346	(9705371)	+	(GCC)n	Simple_repeat	1	36	(0)	4181104
11	16.9	2.9	2.8	chr9	128689355	128689389	(9705328)	+	(GCCCGG)n	Simple_repeat	1	36	(0)	4181105
21	24.6	1.3	3.9	chr9	128689418	128689494	(9705223)	+	(GCGA)n	Simple_repeat	1	78	(0)	4181106
29	17.8	0.0	0.0	chr9	128787274	128787330	(9607387)	+	(GGC)n	Simple_repeat	1	57	(0)	4181331
2134	8.6	6.4	0.0	chr9	130007735	130008014	(8386703)	+	AluSz6	SINE/Alu	1	299	(13)	4184091
2280	7.4	1.0	1.3	chr9	130038400	130038698	(8356019)	C	AluSg	SINE/Alu	(12)	298	1	4184168
34	8.7	0.0	0.0	chr9	130579630	130579678	(7815039)	+	(GCG)n	Simple_repeat	1	49	(0)	4185377
340	26.7	4.6	9.8	chr9	131729677	131729859	(6664858)	+	MIRb	SINE/MIR	95	267	(1)	4187571
415	18.7	16.5	0.0	chr9	134936636	134936726	(3457991)	+	MER81	DNA/hAT-Blackjack	2	110	(4)	4192571
31	25.7	3.5	1.7	chr9	135961271	135961384	(2433333)	+	(GCC)n	Simple_repeat	1	118	(0)	4193846
11	17.1	2.9	2.8	chr9	136363573	136363607	(2031110)	+	(GCCCCA)n	Simple_repeat	1	36	(0)	4194302
17	22.2	2.8	5.5	chr9	136439816	136439886	(1954831)	+	(GCCCC)n	Simple_repeat	1	73	(0)	4194378
19	14.4	6.5	0.0	chr9	137200466	137200511	(1194206)	+	(CCG)n	Simple_repeat	1	49	(0)	4195339
13	0.0	0.0	0.0	chr9	137241341	137241357	(1153360)	+	(CCG)n	Simple_repeat	1	17	(0)	4195377
13	20.1	5.0	0.0	chr9	137459140	137459179	(935538)	+	(CGC)n	Simple_repeat	1	42	(0)	4195657
47	10.1	0.0	0.0	chr9	137459192	137459265	(935452)	+	(GCTCGG)n	Simple_repeat	1	74	(0)	4195658
14	20.7	5.1	3.2	chr9	137578814	137578872	(815845)	+	(GGCGG)n	Simple_repeat	1	62	(0)	4195812
343	28.7	8.7	3.7	chr9	137825617	137825779	(568938)	C	L1ME1	LINE/L1	(1762)	4384	4213	4196201
351	19.6	9.5	0.8	chr9	137825914	137826047	(568670)	C	L1ME1	LINE/L1	(2138)	4008	3862	4196201
14	28.5	2.0	0.0	chrX	318539	318589	(155722306)	+	(CTC)n	Simple_repeat	1	52	(0)	4358399
1334	7.5	1.1	0.0	chrX	1247016	1247189	(154793706)	+	AluY	SINE/Alu	51	226	(85)	4360524
234	32.3	2.9	5.7	chrX	1507756	1507896	(154532999)	C	MIRc	SINE/MIR	(80)	188	52	4361107
15	21.9	1.4	8.0	chrX	1591829	1591902	(154448993)	+	G-rich	Low_complexity	1	75	(0)	4361334
13	24.8	3.0	4.3	chrX	2500739	2500805	(153540090)	+	(CCCCCGC)n	Simple_repeat	1	69	(0)	4362997
3790	8.9	1.5	11.5	chrX	5647183	5647843	(150393052)	C	PRIMA4_LTR	LTR/ERV1	(0)	594	1	4368820
892	20.6	2.3	8.3	chrX	6739422	6739649	(149301246)	+	MER20	DNA/hAT-Charlie	5	218	(1)	4370664
2787	15.8	3.5	2.8	chrX	9961590	9962157	(146078738)	C	L1MB3	LINE/L1	(1)	6182	5611	4375669
56	0.0	0.0	0.0	chrX	11825191	11825238	(144215657)	+	(TG)n	Simple_repeat	1	48	(0)	4378634
1364	18.3	11.3	0.4	chrX	12771837	12772104	(143268791)	C	AluJb	SINE/Alu	(10)	302	2	4380078
223	34.0	10.1	4.3	chrX	13078068	13078392	(142962503)	C	L2a	LINE/L2	(0)	3426	3018	4380585
13	15.2	0.0	3.2	chrX	15158763	15158793	(140882102)	+	A-rich	Low_complexity	1	31	(0)	4383870
3677	12.3	0.3	3.4	chrX	15883108	15883485	(140157410)	C	MER41B	LTR/ERV1	(271)	363	1	4385119
681	0.0	0.0	0.0	chrX	18674909	18674981	(137365914)	C	tRNA-Val-GTA	tRNA	(3)	73	1	4389954
22	19.1	1.5	4.5	chrX	24149370	24149434	(131891461)	+	(CGG)n	Simple_repeat	1	66	(0)	4398942
19	12.1	0.0	0.0	chrX	40543990	40544037	(115496858)	+	(A)n	Simple_repeat	1	48	(0)	4422677
275	34.0	7.5	1.4	chrX	40871748	40871959	(115168936)	+	Tigger16b	DNA/TcMar-Tigger	100	325	(11)	4423211
280	24.6	19.3	3.5	chrX	41121283	41121504	(114919391)	+	MIR	SINE/MIR	14	260	(2)	4423716
26	21.7	0.0	0.0	chrX	47218894	47218952	(108821943)	+	(CGC)n	Simple_repeat	1	59	(0)	4433620
16	22.5	1.6	6.2	chrX	47219042	47219105	(108821790)	+	(GCC)n	Simple_repeat	1	65	(0)	4433621
614	25.7	0.0	5.3	chrX	53704547	53704620	(102336275)	+	L1ME3Cz	LINE/L1	162	232	(765)	4444258
2443	8.8	0.3	0.0	chrX	53704621	53704927	(102335968)	+	AluSp	SINE/Alu	1	308	(5)	4444259
12	25.6	2.4	0.0	chrX	71068325	71068366	(84972529)	+	G-rich	Low_complexity	1	43	(0)	4460743
17	5.3	12.5	0.0	chrX	71068423	71068462	(84972433)	+	(GCAC)n	Simple_repeat	1	45	(0)	4460744
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
27	11.7	2.1	0.0	chrX	107673123	107673170	(48367725)	+	(GTGT)n	Simple_repeat	1	49	(0)	4504615
243	16.7	2.0	2.0	chrX	112679278	112679326	(43361569)	+	L2a	LINE/L2	3378	3426	(0)	4511741
14	20.2	0.0	0.0	chrX	118644577	118644610	(37396285)	+	(CACATA)n	Simple_repeat	1	34	(0)	4519628
353	35.2	7.6	5.1	chrX	118644727	118645058	(37395837)	C	L2	LINE/L2	(467)	2952	2612	4519629
438	27.5	7.4	6.4	chrX	119729736	119729937	(36310958)	C	MIR	SINE/MIR	(2)	260	57	4521683
12	9.7	0.0	0.0	chrX	119730152	119730173	(36310722)	+	(AATA)n	Simple_repeat	1	22	(0)	4521684
2083	10.4	0.3	0.0	chrX	119730175	119730461	(36310434)	+	AluSg	SINE/Alu	1	288	(22)	4521685
13	8.6	10.5	0.0	chrX	131705211	131705227	(24335668)	+	(CTTTTG)n	Simple_repeat	1	20	(0)	4538368
17	3.9	3.7	0.0	chrX	135520841	135520867	(20520028)	+	(GTCCC)n	Simple_repeat	1	28	(0)	4544492
448	33.8	5.8	1.4	chrX	149799104	149799385	(6241510)	C	L1MD2	LINE/L1	(5691)	856	562	4565044
1465	22.6	6.4	0.7	chrX	149799404	149799818	(6241077)	C	L1MD2	LINE/L1	(5031)	1720	1281	4565033
28	0.0	0.0	0.0	chrX	153972940	153972965	(2067930)	+	(GCG)n	Simple_repeat	1	26	(0)	4570997
19	8.9	2.6	2.6	chrX	154436933	154436970	(1603925)	+	(CCCGC)n	Simple_repeat	1	39	(0)	4571861
24	24.1	0.0	1.5	chrX	154437168	154437232	(1603663)	+	(GCG)n	Simple_repeat	1	65	(0)	4571862
13	0.0	0.0	0.0	chrX	154490487	154490503	(1550392)	+	(GCG)n	Simple_repeat	1	17	(0)	4571926