304	26.9	14.3	0.0	chr1	901672	901800	(248054622)	C	L2c	LINE/L2	(5)	3382	3207	1153
13	21.7	0.0	2.6	chr1	923702	923740	(248032682)	+	(AGCCC)n	Simple_repeat	1	39	(0)	1178
2502	6.3	0.3	0.0	chr1	928112	928412	(248028010)	+	AluY	SINE/Alu	1	302	(9)	1181
13	14.9	1.9	9.1	chr1	935225	935278	(248021144)	+	(CCTGGTG)n	Simple_repeat	1	55	(0)	1185
196	21.9	0.0	0.0	chr1	935305	935345	(248021077)	+	MIR3	SINE/MIR	113	153	(55)	1186
15	26.6	0.0	2.0	chr1	942055	942105	(248014317)	+	G-rich	Low_complexity	1	51	(0)	1191
12	27.7	0.0	2.2	chr1	1000791	1000835	(247955587)	+	(GGCCG)n	Simple_repeat	1	45	(0)	1256
17	9.2	5.7	0.0	chr1	1308179	1308213	(247648209)	+	(GGGCGC)n	Simple_repeat	1	37	(0)	1575
13	21.9	3.5	5.0	chr1	1308741	1308798	(247647624)	+	(GGCG)n	Simple_repeat	1	60	(0)	1577
658	26.0	8.2	5.9	chr1	1318170	1318365	(247638057)	+	L1MEg	LINE/L1	1434	1639	(4445)	1585
1580	14.7	6.4	3.1	chr1	1318377	1318662	(247637760)	+	AluJb	SINE/Alu	2	297	(15)	1587
95	36.7	0.3	0.3	chr1	1360851	1361237	(247595185)	+	(CA)n	Simple_repeat	1	388	(0)	1613
316	28.4	6.4	0.0	chr1	1361290	1361391	(247595031)	C	L2b	LINE/L2	(6)	3369	3261	1614
16	24.5	1.6	3.2	chr1	1375060	1375120	(247581302)	+	(GCCCGGC)n	Simple_repeat	1	62	(0)	1639
960	9.8	1.5	0.8	chr1	1402703	1402834	(247553588)	+	AluSp	SINE/Alu	1	133	(180)	1685
2222	12.3	0.3	0.3	chr1	1402847	1403155	(247553267)	+	AluY	SINE/Alu	1	309	(2)	1686
13	17.1	2.3	4.5	chr1	1615445	1615487	(247340935)	+	G-rich	Low_complexity	1	44	(0)	2066
36	6.7	0.0	0.0	chr1	1692366	1692412	(247264010)	+	(GCACCCA)n	Simple_repeat	1	47	(0)	2183
320	29.6	9.2	0.0	chr1	1883549	1883656	(247072766)	C	MIR	SINE/MIR	(32)	230	112	2554
515	16.3	0.0	5.2	chr1	1883669	1883765	(247072657)	+	LSU-rRNA_Hsa	rRNA	4192	4283	(752)	2555
12	21.1	0.0	4.8	chr1	1920053	1920094	(247036328)	+	G-rich	Low_complexity	1	42	(0)	2618
859	35.4	8.1	1.9	chr1	1960338	1961114	(246995308)	+	L1MEd	LINE/L1	197	1025	(6061)	2668
1990	12.0	3.7	0.0	chr1	2053116	2053398	(246903024)	C	AluSg	SINE/Alu	(16)	294	1	2821
630	32.9	14.0	1.1	chr1	3745160	3745599	(245210823)	+	L2a	LINE/L2	2920	3425	(1)	4291
14	23.8	2.0	1.9	chr1	5993052	5993102	(242963320)	+	(CCCTGCC)n	Simple_repeat	1	52	(0)	7535
2301	8.2	0.0	0.3	chr1	6236269	6236561	(242719861)	+	AluSz	SINE/Alu	2	293	(19)	7887
2480	2.1	0.0	0.3	chr1	6404426	6404707	(242551715)	+	AluY	SINE/Alu	1	281	(30)	8159
57	0.0	0.0	0.0	chr1	6404708	6404758	(242551664)	+	(AAAT)n	Simple_repeat	1	51	(0)	8160
16	20.6	3.9	1.9	chr1	6625131	6625182	(242331240)	+	(GCCCC)n	Simple_repeat	1	54	(0)	8559
569	28.0	12.3	6.2	chr1	8356778	8357242	(240599180)	+	L2a	LINE/L2	2928	3424	(2)	11513
2404	9.7	0.0	0.0	chr1	8395194	8395493	(240560929)	+	AluSx3	SINE/Alu	1	300	(11)	11558
591	29.9	6.8	1.7	chr1	8397103	8397337	(240559085)	+	MIR	SINE/MIR	6	253	(9)	11560
2252	8.6	1.1	1.1	chr1	8726136	8726452	(240229970)	C	AluSg	SINE/Alu	(0)	310	1	12122
706	28.7	7.6	5.3	chr1	8822715	8823111	(240133311)	+	AmnSINE1	SINE/5S-Deu-L2	144	550	(25)	12318
293	16.9	16.2	0.0	chr1	9143082	9143164	(239813258)	C	L1MC5a	LINE/L1	(5)	2772	2674	13028
496	30.6	13.2	0.0	chr1	9151246	9151461	(239804961)	+	MIR	SINE/MIR	14	262	(0)	13047
316	27.2	16.4	2.5	chr1	9234168	9234329	(239722093)	C	MIR	SINE/MIR	(9)	253	65	13218
183	28.9	5.5	0.0	chr1	9239802	9239853	(239716569)	+	Penelope1_Vert	LINE/Penelope	877	931	(156)	13231
181	31.3	0.0	0.0	chr1	9293836	9294382	(239662040)	+	(GT)n	Simple_repeat	1	547	(0)	13325
452	29.3	2.6	1.5	chr1	9926996	9927168	(239029254)	C	MIRb	SINE/MIR	(51)	217	42	14648
2289	10.5	0.3	0.0	chr1	10377657	10377950	(238578472)	+	AluSg	SINE/Alu	1	295	(15)	15665
39	11.9	0.0	0.0	chr1	10794135	10794199	(238162223)	+	(GT)n	Simple_repeat	1	65	(0)	16349
810	8.7	0.0	4.2	chr1	11908152	11908271	(237048151)	+	U5	snRNA	1	115	(1)	18706
1346	16.2	1.9	4.1	chr1	11908526	11908796	(237047626)	+	MER1B	DNA/hAT-Charlie	75	339	(0)	18707
381	26.6	7.4	3.1	chr1	11980864	11981022	(236975400)	+	L2c	LINE/L2	3206	3383	(4)	18891
236	31.1	5.3	5.3	chr1	12195037	12195223	(236761199)	+	Charlie15a	DNA/hAT-Charlie	1	187	(37)	19357
33	3.1	0.0	0.0	chr1	12433918	12433950	(236522472)	+	(GA)n	Simple_repeat	1	33	(0)	19789
18	0.0	0.0	0.0	chr1	12433951	12433970	(236522452)	+	(TG)n	Simple_repeat	1	20	(0)	19790
14	0.0	0.0	0.0	chr1	12433970	12433987	(236522435)	+	(GGA)n	Simple_repeat	1	18	(0)	19791
20	0.0	0.0	0.0	chr1	14600667	14600688	(234355734)	+	(A)n	Simple_repeat	1	22	(0)	23494
494	28.2	9.8	1.0	chr1	15112095	15112298	(233844124)	+	MIRb	SINE/MIR	26	249	(19)	24565
53	0.0	0.0	0.0	chr1	15112330	15112374	(233844048)	+	(TG)n	Simple_repeat	1	45	(0)	24566
339	25.6	4.3	2.2	chr1	15155771	15155862	(233800560)	C	L2a	LINE/L2	(6)	3420	3327	24658
2377	7.2	3.3	0.0	chr1	15843454	15843746	(233112676)	C	AluSc8	SINE/Alu	(8)	303	1	26194
1955	14.8	0.0	2.8	chr1	15899162	15899478	(233056944)	C	AluJb	SINE/Alu	(3)	309	2	26312
3818	14.1	6.9	1.6	chr1	15899479	15899532	(233056890)	C	L1MB3	LINE/L1	(681)	5502	5435	26310
27	0.0	0.0	0.0	chr1	15899538	15899563	(233056859)	+	(T)n	Simple_repeat	1	26	(0)	26313
397	27.0	0.0	0.0	chr1	15899570	15899658	(233056764)	C	FLAM_A	SINE/Alu	(41)	101	13	26314
259	35.7	14.5	1.8	chr1	15953666	15953882	(233002540)	+	MIRb	SINE/MIR	4	252	(16)	26391
613	29.0	1.2	0.0	chr1	16121041	16121209	(232835213)	+	MIR	SINE/MIR	90	260	(2)	26733
2263	20.2	3.7	6.1	chr1	16121245	16121517	(232834905)	C	L1MC3	LINE/L1	(503)	7282	7033	26734
2156	14.5	0.0	0.3	chr1	16121518	16121820	(232834602)	C	AluSz	SINE/Alu	(10)	302	1	26735
183	26.2	0.0	0.0	chr1	16122921	16122962	(232833460)	+	MIR3	SINE/MIR	37	78	(130)	26736
322	31.8	21.4	0.7	chr1	16122967	16123240	(232833182)	+	L2c	LINE/L2	2821	3155	(232)	26737
1833	18.1	0.7	0.0	chr1	16324537	16324845	(232631577)	+	AluJo	SINE/Alu	2	312	(0)	27198
12	23.1	3.7	3.6	chr1	16613393	16613446	(232342976)	+	(CCGCGCC)n	Simple_repeat	1	56	(0)	27819
184	25.6	0.0	0.0	chr1	16967807	16967849	(231988573)	C	MER5A	DNA/hAT-Charlie	(87)	102	60	28387
386	30.3	11.6	5.9	chr1	17121462	17121647	(231834775)	C	MIR	SINE/MIR	(0)	262	65	28725
330	28.7	12.2	5.0	chr1	17121686	17121922	(231834500)	+	MIRb	SINE/MIR	1	254	(14)	28726
957	16.9	0.7	0.0	chr1	17232249	17232402	(231724020)	C	AluJr	SINE/Alu	(20)	292	138	28964
693	24.1	1.2	6.6	chr1	17232403	17232660	(231723762)	C	L1M5	LINE/L1	(3115)	3031	2784	28961
407	29.0	3.0	0.1	chr1	17236820	17237008	(231719414)	C	L2a	LINE/L2	(298)	3128	2934	28959
230	35.1	5.9	0.9	chr1	17237023	17237134	(231719288)	+	MIR	SINE/MIR	127	244	(18)	28977
222	23.6	1.8	0.0	chr1	17867461	17867515	(231088907)	C	L2a	LINE/L2	(3)	3372	3317	30403
562	21.1	0.0	0.0	chr1	17867600	17867713	(231088709)	+	L1ME1	LINE/L1	5714	5827	(352)	30404
1779	9.8	0.0	0.0	chr1	17867714	17867938	(231088484)	C	AluSq	SINE/Alu	(16)	297	73	30405
254	33.4	3.5	1.2	chr1	18387446	18387585	(230568837)	C	MIR3	SINE/MIR	(115)	153	14	31523
755	27.9	9.7	0.0	chr1	18387620	18387852	(230568570)	C	LTR16C	LTR/ERVL	(1)	488	231	31524
2412	9.0	0.0	1.3	chr1	18946406	18946716	(230009706)	C	AluSg4	SINE/Alu	(3)	307	1	32755
646	26.9	3.6	6.6	chr1	18946717	18946902	(230009520)	+	MIR	SINE/MIR	68	252	(10)	32754
233	21.9	3.0	4.5	chr1	18946910	18946976	(230009446)	C	L2b	LINE/L2	(0)	3426	3361	32756
626	24.9	4.4	3.4	chr1	18955208	18955410	(230001012)	+	MIRb	SINE/MIR	17	224	(44)	32770
338	24.0	1.4	2.2	chr1	19480489	19480600	(229475822)	C	L2b	LINE/L2	(10)	3416	3259	33716
207	21.5	21.9	3.2	chr1	19480848	19480972	(229475450)	+	MIRb	SINE/MIR	7	161	(107)	33717
189	30.8	3.0	1.5	chr1	19800376	19800441	(229155981)	C	MIRc	SINE/MIR	(12)	256	190	34516
364	33.0	9.9	5.1	chr1	19800440	19800664	(229155758)	+	L2b	LINE/L2	2993	3227	(148)	34517
353	31.9	4.2	0.7	chr1	21338595	21338730	(227617692)	C	MIR3	SINE/MIR	(18)	190	50	37705
42	0.0	0.0	0.0	chr1	21345885	21345920	(227610502)	+	(TG)n	Simple_repeat	1	36	(0)	37718
20	0.0	0.0	0.0	chr1	21345921	21345942	(227610480)	+	(CG)n	Simple_repeat	1	22	(0)	37719
279	29.5	7.9	2.8	chr1	21492456	21492563	(227463859)	C	L2b	LINE/L2	(15)	3360	3247	38005
2535	7.1	0.0	0.6	chr1	21539645	21539955	(227416467)	C	AluYm1	SINE/Alu	(2)	309	1	38127
1940	8.0	11.8	0.0	chr1	21658942	21659204	(227297218)	C	AluSp	SINE/Alu	(15)	298	1	38409
399	28.0	5.2	1.3	chr1	21663978	21664126	(227292296)	C	MIRc	SINE/MIR	(66)	196	35	38421
250	33.8	7.7	1.3	chr1	21664194	21664352	(227292070)	C	MIRc	SINE/MIR	(71)	197	28	38422
986	20.9	11.4	5.6	chr1	22452359	22452678	(226503744)	+	MER58B	DNA/hAT-Charlie	1	341	(0)	40207
278	22.1	11.3	1.1	chr1	22785988	22786074	(226170348)	+	MER113A	DNA/hAT-Charlie	216	312	(2)	40934
319	29.7	23.1	0.0	chr1	22786087	22786286	(226170136)	+	MIRb	SINE/MIR	2	260	(8)	40935
309	24.0	13.8	2.9	chr1	23019090	23019192	(225937230)	+	L2c	LINE/L2	3272	3387	(0)	41474
14	26.9	1.4	5.3	chr1	23019449	23019522	(225936900)	+	(GCGCGGC)n	Simple_repeat	1	75	(0)	41475
17	15.1	6.8	0.0	chr1	23168708	23168751	(225787671)	+	(CCG)n	Simple_repeat	1	47	(0)	41760
242	37.1	10.7	0.6	chr1	23592664	23592831	(225363591)	C	MIRb	SINE/MIR	(16)	252	66	42819
225	29.6	12.3	3.6	chr1	23592801	23592886	(225363536)	C	L2	LINE/L2	(453)	2966	2872	42820
2473	6.4	0.0	0.3	chr1	24188061	24188358	(224768064)	+	AluSx	SINE/Alu	2	298	(14)	44325
526	28.2	3.7	3.7	chr1	24365020	24365207	(224591215)	C	AmnSINE1	SINE/5S-Deu-L2	(71)	504	317	44751
12	26.4	2.2	0.0	chr1	24642576	24642620	(224313802)	+	(GAGGCC)n	Simple_repeat	1	46	(0)	45376
759	20.0	4.8	0.0	chr1	24847231	24847370	(224109052)	C	MIR	SINE/MIR	(26)	236	90	45849
1285	14.3	4.2	0.0	chr1	24847371	24847573	(224108849)	+	AluJo	SINE/Alu	87	298	(14)	45850
231	22.6	14.5	0.0	chr1	24847574	24847626	(224108796)	C	MIR	SINE/MIR	(163)	99	38	45849
2587	5.0	0.3	0.3	chr1	25475064	25475364	(223481058)	+	AluYf1	SINE/Alu	1	301	(10)	47224
894	14.1	0.0	1.5	chr1	25475430	25475564	(223480858)	+	FLAM_C	SINE/Alu	1	133	(10)	47225
995	19.7	2.5	10.6	chr1	25616873	25617481	(223338941)	+	MER52D	LTR/ERV1	5	1016	(1107)	47517
15	20.0	2.5	0.0	chr1	26170107	26170146	(222786276)	+	(CGACCC)n	Simple_repeat	1	41	(0)	48734
234	35.3	9.9	3.8	chr1	26321367	26321631	(222634791)	+	L2c	LINE/L2	3063	3345	(42)	49060
18	22.2	2.1	0.0	chr1	26472643	26472689	(222483733)	+	(GCC)n	Simple_repeat	1	48	(0)	49429
219	30.0	1.2	3.6	chr1	26787534	26787616	(222168806)	C	L2b	LINE/L2	(19)	3356	3276	50166
253	32.8	8.5	0.0	chr1	27157145	27157269	(221799153)	C	MER5B	DNA/hAT-Charlie	(24)	165	8	51061
258	31.7	4.6	0.9	chr1	27157260	27157364	(221799058)	C	MIR3	SINE/MIR	(23)	185	77	51062
276	22.8	7.1	3.7	chr1	27157372	27157453	(221798969)	C	L2b	LINE/L2	(0)	3375	3291	51063
484	24.2	3.3	11.9	chr1	27157462	27157663	(221798759)	+	L1ME3A	LINE/L1	5989	6172	(1)	51064
468	29.2	3.6	0.6	chr1	27574385	27574546	(221381876)	C	MIRb	SINE/MIR	(27)	241	75	52048
21	15.3	1.8	5.2	chr1	27603927	27603983	(221352439)	+	(TCCC)n	Simple_repeat	1	58	(0)	52103
19	22.0	6.9	4.8	chr1	27604061	27604176	(221352246)	+	(CCTCGC)n	Simple_repeat	1	124	(0)	52104
12	25.3	0.0	2.5	chr1	27604230	27604269	(221352153)	+	G-rich	Low_complexity	1	40	(0)	52105
374	33.5	12.3	4.7	chr1	27608251	27608699	(221347723)	+	L2c	LINE/L2	2820	3320	(67)	52111
49	0.0	0.0	0.0	chr1	27608842	27608883	(221347539)	+	(GT)n	Simple_repeat	1	42	(0)	52113
30	0.0	0.0	0.0	chr1	27608903	27608928	(221347494)	+	(GT)n	Simple_repeat	1	26	(0)	52113
16	5.3	0.0	0.0	chr1	27608948	27608967	(221347455)	+	(GT)n	Simple_repeat	1	20	(0)	52113
49	0.0	0.0	0.0	chr1	27608987	27609028	(221347394)	+	(GT)n	Simple_repeat	1	42	(0)	52113
271	32.5	5.0	6.8	chr1	27609199	27609403	(221347019)	+	L2c	LINE/L2	2918	3118	(269)	52114
386	26.6	1.1	1.1	chr1	27672566	27672660	(221283762)	C	MIRb	SINE/MIR	(10)	258	164	52274
3120	31.7	6.9	5.7	chr1	27672710	27673822	(221282600)	C	ERVL-E-int	LTR/ERVL	(1133)	4534	3364	52275
248	35.6	4.9	5.4	chr1	27915036	27915240	(221041182)	C	L3	LINE/CR1	(198)	3901	3698	52826
449	33.0	6.6	4.9	chr1	28172722	28172944	(220783478)	+	MIRc	SINE/MIR	15	241	(27)	53441
1829	13.5	0.3	6.8	chr1	28172988	28173298	(220783124)	+	AluJr	SINE/Alu	1	291	(21)	53442
2082	8.8	1.3	6.3	chr1	28197234	28197550	(220758872)	C	AluSz	SINE/Alu	(11)	301	1	53519
219	19.2	5.5	1.9	chr1	28197574	28197626	(220758796)	C	MIRc	SINE/MIR	(118)	150	96	53520
216	35.1	13.4	3.9	chr1	28248844	28248997	(220707425)	C	MIRc	SINE/MIR	(75)	193	23	53651
12	5.5	0.0	0.0	chr1	28416527	28416545	(220539877)	+	(GTA)n	Simple_repeat	1	19	(0)	54145
469	26.0	13.0	0.7	chr1	28416745	28416899	(220539523)	C	L1M5	LINE/L1	(903)	5243	5067	54146
384	29.4	2.7	2.7	chr1	28648880	28649025	(220307397)	+	AluJr4	SINE/Alu	11	156	(156)	54782
59	0.0	0.0	0.0	chr1	28885033	28885082	(220071340)	+	(AC)n	Simple_repeat	1	50	(0)	55402
2148	9.1	0.0	3.3	chr1	29136078	29136384	(219820038)	+	AluSq	SINE/Alu	1	297	(16)	55994
14	19.3	6.4	0.0	chr1	29237124	29237170	(219719252)	+	(GTGTTGT)n	Simple_repeat	1	50	(0)	56234
16	22.7	3.6	3.5	chr1	29237289	29237343	(219719079)	+	(GT)n	Simple_repeat	1	57	(0)	56235
16725	17.9	2.5	1.9	chr1	29377930	29380337	(219576085)	C	L1MA4	LINE/L1	(3898)	3667	1239	56484
621	10.2	5.4	0.0	chr1	29894842	29894929	(219061493)	C	AluSz6	SINE/Alu	(16)	296	204	57460
374	29.2	11.4	0.0	chr1	29894946	29895092	(219061330)	+	MIRb	SINE/MIR	103	268	(0)	57461
339	34.3	5.2	0.0	chr1	30707575	30707775	(218248647)	C	MIRb	SINE/MIR	(35)	233	22	58885
34	24.9	3.8	0.9	chr1	30727879	30727984	(218228438)	+	(TCTC)n	Simple_repeat	1	110	(0)	58929
195	23.5	1.6	0.4	chr1	30728106	30728166	(218228256)	C	L3b	LINE/CR1	(2)	5230	5184	58930
15	26.8	6.8	1.3	chr1	32179895	32179967	(216776455)	+	(GC)n	Simple_repeat	1	78	(0)	62270
529	30.5	4.3	0.0	chr1	32291425	32291601	(216664821)	+	MIRb	SINE/MIR	81	265	(3)	62537
424	26.6	2.6	0.9	chr1	32291676	32291811	(216664611)	+	MIR3	SINE/MIR	37	170	(38)	62538
15	11.7	0.0	0.0	chr1	32292241	32292268	(216664154)	+	(GGGCC)n	Simple_repeat	1	28	(0)	62539
2369	8.1	0.3	0.0	chr1	35380295	35380625	(213575797)	C	AluY	SINE/Alu	(0)	311	1	68682
826	20.0	4.8	2.4	chr1	35476155	35476318	(213480104)	C	MER20	DNA/hAT-Charlie	(0)	219	52	68836
14	16.4	3.1	9.0	chr1	36088871	36088935	(212867487)	+	(GCGGCA)n	Simple_repeat	1	67	(0)	70109
1010	23.3	6.6	0.0	chr1	36384411	36384650	(212571772)	C	MIR	SINE/MIR	(0)	262	6	70744
16	0.0	0.0	0.0	chr1	36384697	36384717	(212571705)	+	(AATG)n	Simple_repeat	1	21	(0)	70745
331	25.6	6.5	6.5	chr1	36397465	36397602	(212558820)	+	MIRc	SINE/MIR	11	148	(120)	70781
567	26.3	13.4	1.6	chr1	36464763	36464980	(212491442)	+	MIRb	SINE/MIR	7	253	(15)	70935
3656	16.0	4.2	0.6	chr1	36465010	36465694	(212490728)	+	MER67C	LTR/ERV1	1	711	(0)	70936
375	29.7	16.4	0.0	chr1	36824847	36824994	(212131428)	+	MIRb	SINE/MIR	76	252	(16)	71637
13	8.9	0.0	3.9	chr1	39270452	39270477	(209685945)	+	(TGG)n	Simple_repeat	1	26	(0)	76443
2322	9.2	0.3	0.3	chr1	39883664	39883969	(209072453)	C	AluSx1	SINE/Alu	(6)	306	1	77621
331	25.4	7.8	2.5	chr1	40583881	40584001	(208372421)	C	MER5A	DNA/hAT-Charlie	(11)	178	51	79114
1001	26.3	5.0	5.7	chr1	40844786	40845126	(208111296)	C	MLT1H	LTR/ERVL-MaLR	(37)	512	185	79609
236	22.7	2.2	2.2	chr1	40845165	40845254	(208111168)	C	MamRep564	Unknown	(144)	213	124	79611
262	22.9	14.4	2.4	chr1	40845299	40845383	(208111039)	C	MamRep564	Unknown	(218)	139	43	79611
17	26.3	3.1	1.5	chr1	42335243	42335307	(206621115)	+	(CCG)n	Simple_repeat	1	67	(0)	82310
417	17.1	14.6	2.8	chr1	42657959	42658066	(206298356)	C	L2a	LINE/L2	(17)	3409	3287	82917
235	29.9	0.0	1.3	chr1	42959104	42959181	(205997241)	+	MIR3	SINE/MIR	77	153	(55)	83431
440	25.0	1.9	0.0	chr1	42959265	42959368	(205997054)	+	MIR	SINE/MIR	132	237	(25)	83431
224	31.6	3.0	6.7	chr1	42959491	42959595	(205996827)	+	L2c	LINE/L2	3085	3185	(202)	83432
788	26.7	6.0	0.9	chr1	43650656	43650878	(205305544)	C	MIRb	SINE/MIR	(8)	260	26	84649
12	12.2	3.7	0.0	chr1	44267660	44267686	(204688736)	+	(CTGC)n	Simple_repeat	1	28	(0)	85757
30	21.0	0.0	0.0	chr1	44405166	44405226	(204551196)	+	(TG)n	Simple_repeat	1	61	(0)	85972
29	19.0	0.0	3.0	chr1	44405366	44405438	(204550984)	+	(GCC)n	Simple_repeat	1	70	(0)	85973
250	26.3	15.8	2.3	chr1	44587532	44587706	(204368716)	C	LTR78B	LTR/ERV1	(316)	980	778	86322
386	26.8	2.8	6.1	chr1	44587714	44587860	(204368562)	+	MIRb	SINE/MIR	109	250	(18)	86323
632	17.4	0.0	0.9	chr1	44731055	44731170	(204225252)	C	U5	snRNA	(1)	115	1	86589
8871	4.6	0.3	0.4	chr1	45926917	45927988	(203028434)	C	MER11C	LTR/ERVK	(0)	1071	1	89039
385	27.0	0.8	3.1	chr1	46179477	46179606	(202776816)	C	MIRb	SINE/MIR	(127)	141	15	89501
13	29.6	4.8	0.0	chr1	46179760	46179822	(202776600)	+	GA-rich	Low_complexity	1	66	(0)	89502
34	16.8	3.2	4.1	chr1	46198396	46198489	(202757933)	+	(CGC)n	Simple_repeat	1	97	(0)	89528
30	5.7	0.0	0.0	chr1	46198519	46198555	(202757867)	+	(GGC)n	Simple_repeat	1	37	(0)	89529
451	25.9	12.3	2.5	chr1	46198868	46198936	(202757486)	C	MIR	SINE/MIR	(41)	221	147	89530
2380	8.0	0.0	0.3	chr1	46198937	46199236	(202757186)	C	AluSz	SINE/Alu	(7)	305	7	89531
1301	12.0	1.0	1.0	chr1	46293559	46293750	(202662672)	C	AluSz6	SINE/Alu	(1)	311	120	89734
1770	13.4	5.5	4.6	chr1	46293752	46294057	(202662365)	C	AluSz	SINE/Alu	(0)	312	4	89735
432	31.0	9.1	0.5	chr1	46747993	46748193	(202208229)	C	MIRb	SINE/MIR	(10)	258	39	90573
287	25.4	0.0	0.0	chr1	47936860	47937501	(201018921)	+	(CATCAT)n	Simple_repeat	1	642	(0)	92593
353	30.4	0.0	1.1	chr1	47937507	47937599	(201018823)	C	MIR1_Amn	SINE/MIR	(66)	164	73	92594
20	14.5	0.0	5.9	chr1	47997697	47997748	(200958674)	+	(CCTCC)n	Simple_repeat	1	48	(0)	92703
2249	12.1	0.3	0.0	chr1	51430287	51430584	(197525838)	+	AluSz	SINE/Alu	1	299	(13)	98644
1669	19.0	0.3	1.4	chr1	51430675	51430963	(197525459)	+	AluJb	SINE/Alu	2	287	(25)	98645
253	18.0	9.0	1.6	chr1	51516218	51516279	(197440143)	C	L3	LINE/CR1	(9)	4090	4024	98828
283	30.6	18.8	0.0	chr1	52002566	52002699	(196953723)	C	MIRb	SINE/MIR	(7)	261	97	99938
8761	11.3	4.7	7.8	chr1	52037511	52037919	(196918503)	C	Tigger2	DNA/TcMar-Tigger	(1135)	1583	1240	100034
13	15.2	2.5	4.9	chr1	52365969	52366008	(196590414)	+	(CCGCG)n	Simple_repeat	1	41	(0)	100699
19	14.1	0.0	2.4	chr1	52552993	52553033	(196403389)	+	(CCGCCG)n	Simple_repeat	1	41	(0)	101091
375	34.1	10.0	3.5	chr1	52955573	52956036	(196000386)	+	L1MEd	LINE/L1	474	971	(6115)	102179
605	29.7	2.0	4.4	chr1	53665968	53666171	(195290251)	C	MIR	SINE/MIR	(63)	199	1	103505
246	25.6	10.7	9.4	chr1	53666187	53666346	(195290076)	C	MIRb	SINE/MIR	(4)	264	100	103509
536	22.6	11.1	3.7	chr1	53889349	53889564	(195066858)	+	MIRb	SINE/MIR	9	242	(26)	103980
36	20.2	2.5	0.0	chr1	54476197	54476275	(194480147)	+	(CA)n	Simple_repeat	1	81	(0)	105165
21	3.7	3.6	0.0	chr1	54476321	54476348	(194480074)	+	(CA)n	Simple_repeat	1	29	(0)	105165
20	26.2	3.7	2.4	chr1	54476356	54476399	(194480023)	+	(CT)n	Simple_repeat	1	44	(0)	105166
32	5.3	2.5	0.0	chr1	54476400	54476439	(194479983)	+	(CA)n	Simple_repeat	1	41	(0)	105167
20	26.2	3.7	2.4	chr1	54476440	54476476	(194479946)	+	(CT)n	Simple_repeat	1	38	(0)	105168
15	14.4	0.0	0.0	chr1	54476526	54476549	(194479873)	+	(TC)n	Simple_repeat	1	24	(0)	105169
280	29.2	10.5	2.9	chr1	54600816	54601007	(194355415)	+	L2b	LINE/L2	3205	3420	(6)	105459
60	26.5	0.0	0.0	chr1	54601067	54601204	(194355218)	+	(GT)n	Simple_repeat	1	138	(0)	105468
554	31.2	7.2	2.5	chr1	54884096	54884292	(194072130)	C	MIRb	SINE/MIR	(22)	246	40	106104
253	32.4	3.6	2.7	chr1	55447566	55447676	(193508746)	+	MIR	SINE/MIR	39	150	(112)	107126
237	22.4	4.3	0.0	chr1	55447860	55447926	(193508496)	+	MamRep434	DNA/TcMar-Tigger	73	142	(284)	107127
11797	11.0	2.6	2.0	chr1	55890939	55893290	(193063132)	C	L1PA14	LINE/L1	(1965)	4708	2338	107825
620	20.0	0.5	22.1	chr1	55893307	55893410	(193063012)	+	L1PREC2	LINE/L1	2770	2873	(5282)	107827
1359	19.1	0.4	5.7	chr1	55893411	55893693	(193062729)	+	AluJo	SINE/Alu	1	268	(44)	107828
574	24.4	2.2	4.9	chr1	56531688	56531872	(192424550)	+	MIRb	SINE/MIR	27	206	(62)	109029
19	16.7	3.4	4.9	chr1	56645326	56645384	(192311038)	+	(GGC)n	Simple_repeat	1	61	(0)	109245
18	26.9	1.4	2.8	chr1	56645567	56645637	(192310785)	+	G-rich	Low_complexity	1	72	(0)	109246
19	32.5	0.0	0.0	chr1	58782402	58782467	(190173955)	+	(CTG)n	Simple_repeat	1	66	(0)	113504
19	25.6	2.9	5.7	chr1	58782585	58782687	(190173735)	+	(GCTGCC)n	Simple_repeat	1	106	(0)	113505
390	31.7	4.3	0.5	chr1	58899474	58899676	(190056746)	C	MIRc	SINE/MIR	(32)	236	26	113772
332	36.3	8.1	2.0	chr1	59014688	59015174	(189941248)	+	L2b	LINE/L2	2408	2926	(493)	114007
253	25.0	12.2	2.7	chr1	59075889	59075927	(189880495)	C	MIRc	SINE/MIR	(30)	238	201	114138
554	23.2	8.5	1.3	chr1	59075928	59076080	(189880342)	C	MER5A1	DNA/hAT-Charlie	(1)	165	1	114139
253	25.0	12.2	2.7	chr1	59076081	59076151	(189880271)	C	MIRc	SINE/MIR	(68)	200	117	114138
278	34.6	6.7	0.7	chr1	59076273	59076426	(189879996)	+	MIRb	SINE/MIR	54	217	(51)	114140
294	34.7	5.8	4.0	chr1	59077772	59077993	(189878429)	C	MIRb	SINE/MIR	(21)	247	22	114144
186	29.4	5.2	5.2	chr1	59078054	59078168	(189878254)	C	MIR	SINE/MIR	(29)	233	119	114145
1276	25.0	5.8	3.7	chr1	59147788	59148312	(189808110)	C	L2a	LINE/L2	(1)	3425	2871	114307
197	26.3	1.7	9.5	chr1	59296177	59296239	(189660183)	+	L2b	LINE/L2	3239	3296	(79)	114620
37	4.1	5.9	0.0	chr1	61082673	61082723	(187873699)	+	(TC)n	Simple_repeat	1	54	(0)	117650
15	18.9	6.2	0.0	chr1	61082727	61082774	(187873648)	+	(CACGCA)n	Simple_repeat	1	51	(0)	117651
20	24.2	0.0	5.3	chr1	61082849	61082923	(187873499)	+	G-rich	Low_complexity	1	75	(0)	117652
2532	9.4	0.0	0.0	chr1	62023008	62023306	(186933116)	+	AluSq2	SINE/Alu	1	299	(14)	119319
463	32.5	12.9	0.8	chr1	62023404	62023654	(186932768)	C	L2c	LINE/L2	(0)	3387	3102	119320
1622	16.6	0.4	4.2	chr1	62299056	62299344	(186657078)	C	AluJb	SINE/Alu	(19)	293	16	119938
627	25.6	14.0	6.3	chr1	62358769	62359100	(186597322)	C	MLT1H	LTR/ERVL-MaLR	(43)	506	100	120076
332	14.3	0.0	1.8	chr1	62359159	62359215	(186597207)	+	MLT1J	LTR/ERVL-MaLR	447	502	(10)	120075
426	25.8	10.8	9.6	chr1	62621963	62622243	(186334179)	+	MLT1H	LTR/ERVL-MaLR	42	354	(195)	120536
813	29.6	8.0	1.3	chr1	63277585	63277817	(185678605)	+	MIRb	SINE/MIR	17	266	(2)	121739
12	18.4	0.0	5.6	chr1	63277827	63277862	(185678560)	+	(TTTTC)n	Simple_repeat	1	36	(0)	121740
16	34.5	1.1	3.3	chr1	63277863	63277910	(185678512)	+	(TTTCTT)n	Simple_repeat	6	90	(0)	121741
11	21.5	8.2	0.0	chr1	63322267	63322315	(185634107)	+	(CCCACG)n	Simple_repeat	1	53	(0)	121839
13	13.2	0.0	0.0	chr1	63322293	63322317	(185634105)	+	(CACC)n	Simple_repeat	1	25	(0)	121840
12	17.6	4.0	5.8	chr1	63594013	63594062	(185362360)	+	(CTCTCC)n	Simple_repeat	1	52	(0)	122314
1951	15.5	1.7	0.0	chr1	63673997	63674287	(185282135)	C	AluJb	SINE/Alu	(16)	296	1	122460
585	33.6	10.5	8.7	chr1	63674288	63674382	(185282040)	+	L2a	LINE/L2	3345	3425	(1)	122452
597	22.8	3.6	4.8	chr1	63915043	63915208	(185041214)	C	MIRb	SINE/MIR	(65)	203	40	122937
553	25.4	0.0	2.3	chr1	63982269	63982397	(184974025)	+	MIRc	SINE/MIR	137	262	(6)	123069
276	26.7	0.0	0.0	chr1	64176324	64176398	(184780024)	C	MIR	SINE/MIR	(0)	262	188	123446
698	26.6	6.5	1.1	chr1	64176402	64176591	(184779831)	C	MIR	SINE/MIR	(47)	215	15	123446
257	27.8	7.7	1.4	chr1	64581613	64581685	(184374737)	C	MER91C	DNA/hAT-Tip100	(28)	112	35	124144
376	28.9	12.6	0.5	chr1	64838644	64838831	(184117591)	+	MIRc	SINE/MIR	17	230	(38)	124576
2833	1.0	0.0	0.3	chr1	64838864	64839170	(184117252)	+	AluYi6	SINE/Alu	1	306	(5)	124577
299	27.9	10.4	2.3	chr1	64893304	64893435	(184062987)	+	MIR3	SINE/MIR	38	181	(27)	124672
564	22.7	10.5	1.9	chr1	64893437	64893593	(184062829)	+	MIR	SINE/MIR	13	184	(78)	124673
309	28.2	9.4	4.5	chr1	65002361	65002589	(183953833)	+	MIRb	SINE/MIR	8	251	(17)	124873
13	9.8	0.0	0.0	chr1	65002691	65002712	(183953710)	+	(CGG)n	Simple_repeat	1	22	(0)	124874
23	15.3	0.0	5.4	chr1	65066726	65066781	(183889641)	+	(TCC)n	Simple_repeat	1	56	(0)	125013
12	16.8	0.0	0.0	chr1	65066925	65066951	(183889471)	+	(CCCCT)n	Simple_repeat	1	27	(0)	125014
15	7.5	0.0	6.2	chr1	65067136	65067167	(183889255)	+	(GGCCC)n	Simple_repeat	1	32	(0)	125015
320	22.6	27.2	0.0	chr1	67409264	67409386	(181547036)	C	MER58C	DNA/hAT-Charlie	(2)	213	39	128792
190	32.8	6.5	4.9	chr1	67750437	67750558	(181205864)	+	L2a	LINE/L2	3293	3416	(10)	129516
2597	8.3	0.0	0.0	chr1	67827425	67827724	(181128698)	C	AluY	SINE/Alu	(11)	300	1	129648
36	7.3	0.0	0.0	chr1	68230571	68230614	(180725808)	+	(GT)n	Simple_repeat	1	44	(0)	130264
243	32.0	3.2	6.4	chr1	68236836	68237013	(180719409)	+	L2b	LINE/L2	3207	3362	(25)	130279
231	24.2	3.4	1.2	chr1	70355068	70355173	(178601249)	C	L2b	LINE/L2	(4)	3383	3274	133274
12656	15.4	4.8	0.9	chr1	77604960	77607065	(171349357)	+	L1MA9	LINE/L1	11	2200	(5365)	143172
659	27.0	0.0	1.2	chr1	80825203	80825367	(168131055)	+	UCON62	DNA?	4	166	(11)	147640
558	26.4	11.6	1.5	chr1	84103160	84103405	(164853017)	+	MLT1G	LTR/ERVL-MaLR	1	284	(307)	152069
594	25.7	10.3	0.0	chr1	84103590	84103764	(164852658)	+	MLT1G	LTR/ERVL-MaLR	397	591	(0)	152069
15	11.0	7.3	2.3	chr1	84690710	84690750	(164265672)	+	(CTGCGG)n	Simple_repeat	1	44	(0)	152920
12	22.7	5.7	1.8	chr1	84690818	84690870	(164265552)	+	G-rich	Low_complexity	1	56	(0)	152921
40	0.0	0.0	0.0	chr1	85580463	85580496	(163375926)	+	(AC)n	Simple_repeat	1	34	(0)	154403
73	1.5	0.0	0.0	chr1	85580533	85580599	(163375823)	+	(AC)n	Simple_repeat	1	67	(0)	154403
270	22.8	12.2	0.0	chr1	86704109	86704187	(162252235)	+	L2b	LINE/L2	3296	3385	(2)	155965
12	20.4	5.6	3.5	chr1	88684485	88684538	(160271884)	+	(CTCTCCC)n	Simple_repeat	1	57	(0)	158816
28	6.1	0.0	0.0	chr1	89524685	89524719	(159431703)	+	(CCT)n	Simple_repeat	1	35	(0)	159966
185	25.3	8.1	5.2	chr1	89719698	89719793	(159236629)	+	AmnSINE1	SINE/5S-Deu-L2	337	435	(140)	160233
12	19.6	2.9	0.0	chr1	89720098	89720132	(159236290)	+	(GTGAGT)n	Simple_repeat	1	36	(0)	160234
2519	9.7	0.0	0.3	chr1	89889906	89890216	(159066206)	+	AluY	SINE/Alu	1	310	(1)	160496
281	29.1	6.4	0.0	chr1	89890239	89890355	(159066067)	+	Tigger15a	DNA/TcMar-Tigger	412	536	(179)	160497
292	23.6	17.3	2.6	chr1	91584277	91584389	(157372033)	+	MIRc	SINE/MIR	2	134	(134)	162943
747	20.6	1.3	0.0	chr1	91584452	91584606	(157371816)	C	MER5A1	DNA/hAT-Charlie	(0)	166	10	162944
204	30.2	10.2	0.0	chr1	91842749	91842854	(157113568)	C	MIRb	SINE/MIR	(29)	239	122	163334
17	20.1	0.0	0.0	chr1	91886295	91886334	(157070088)	+	(CCCCCTC)n	Simple_repeat	1	40	(0)	163409
17	17.2	0.0	7.5	chr1	91886335	91886345	(157070077)	+	(CTC)n	Simple_repeat	3	53	(0)	163410
27	0.0	0.0	0.0	chr1	93346087	93346112	(155610310)	+	(GCAGCG)n	Simple_repeat	1	26	(0)	166155
23	15.9	2.0	1.9	chr1	93346157	93346207	(155610215)	+	(GGC)n	Simple_repeat	1	52	(0)	166156
194	27.9	8.8	0.9	chr1	93677790	93677894	(155278528)	C	L2c	LINE/L2	(1011)	2408	2295	166660
488	5.5	0.0	14.1	chr1	93847573	93847657	(155108765)	+	tRNA-Arg-AGA	tRNA	1	73	(3)	166925
888	20.2	0.6	0.6	chr1	93960726	93960888	(154995534)	C	AluJr	SINE/Alu	(13)	299	137	167084
276	34.9	4.5	1.6	chr1	94542256	94542383	(154414039)	+	MIRc	SINE/MIR	50	181	(87)	167942
444	20.2	14.2	9.2	chr1	94854705	94854875	(154101547)	+	MER20	DNA/hAT-Charlie	1	154	(65)	168415
996	19.1	3.1	4.8	chr1	101282328	101282558	(147673864)	C	Charlie10a	DNA/hAT-Charlie	(29)	251	25	177807
476	31.7	3.9	1.0	chr1	101282650	101282850	(147673572)	+	L2	LINE/L2	2713	2919	(500)	177808
2715	19.6	5.5	7.2	chr1	108750530	108751352	(140205070)	C	MER21C	LTR/ERVL	(33)	905	6	187263
813	16.4	0.0	0.0	chr1	108827970	108828085	(140128337)	+	AluSz6	SINE/Alu	1	116	(196)	187390
35	0.0	0.0	0.0	chr1	108828088	108828120	(140128302)	+	(AAAC)n	Simple_repeat	1	33	(0)	187391
623	26.9	8.5	0.6	chr1	108867458	108867640	(140088782)	+	MIRb	SINE/MIR	56	254	(14)	187461
18977	13.3	4.9	2.1	chr1	109962805	109965848	(138990574)	+	L1MC1	LINE/L1	65	3232	(3089)	189369
13	16.2	0.0	0.0	chr1	110150525	110150552	(138805870)	+	(CGCTC)n	Simple_repeat	1	28	(0)	189641
505	27.9	7.2	6.2	chr1	110647401	110647660	(138308762)	C	MER121	DNA/hAT?	(100)	301	39	190523
13	25.9	0.0	8.6	chr1	110674722	110674802	(138281620)	+	G-rich	Low_complexity	1	81	(0)	190557
485	29.1	3.3	0.0	chr1	110677117	110677233	(138279189)	C	MIRc	SINE/MIR	(142)	126	6	190559
431	31.1	1.8	3.5	chr1	110677288	110677460	(138278962)	+	LFSINE_Vert	SINE/tRNA	44	213	(246)	190560
452	26.2	0.9	1.8	chr1	111475714	111475822	(137480600)	+	MamRep605	LTR?	609	716	(133)	191580
1976	15.2	0.3	0.7	chr1	111731357	111731651	(137224771)	C	AluJb	SINE/Alu	(18)	294	1	191983
606	25.8	4.6	7.9	chr1	111731652	111731732	(137224690)	+	MIR	SINE/MIR	133	203	(59)	191982
25	12.6	0.0	0.0	chr1	111990189	111990231	(136966191)	+	(GTGT)n	Simple_repeat	1	43	(0)	192420
14	31.8	4.0	0.0	chr1	111990232	111990262	(136966160)	+	G-rich	Low_complexity	1	77	(0)	192421
301	28.1	10.9	0.0	chr1	113209374	113209487	(135746935)	C	MIRb	SINE/MIR	(34)	234	107	194673
578	31.8	1.2	5.2	chr1	115437401	115437649	(133518773)	+	MIRc	SINE/MIR	13	251	(17)	198173
349	0.0	0.0	0.0	chr1	115437705	115437748	(133518674)	C	L1PA4	LINE/L1	(3)	6152	6109	198174
2446	7.9	0.0	1.3	chr1	116672300	116672603	(132283819)	C	AluSx1	SINE/Alu	(12)	300	1	200079
21	0.0	0.0	0.0	chr1	116672626	116672648	(132283774)	+	(AG)n	Simple_repeat	1	23	(0)	200080
766	27.8	3.3	2.9	chr1	116672890	116673130	(132283292)	+	MIR	SINE/MIR	11	252	(10)	200081
50	0.0	0.0	0.0	chr1	116878181	116878223	(132078199)	+	(GT)n	Simple_repeat	1	43	(0)	200423
213	24.1	1.6	2.8	chr1	117060732	117060815	(131895607)	+	MIR3	SINE/MIR	64	147	(115)	200698
1007	18.3	2.0	1.5	chr1	117148284	117148483	(131807939)	+	MIR	SINE/MIR	58	258	(4)	200827
190	39.0	2.0	0.0	chr1	117148520	117148619	(131807803)	+	L2	LINE/L2	2312	2413	(1006)	200828
1397	25.9	8.0	3.2	chr1	117148663	117149161	(131807261)	C	LTR79	LTR/ERVL	(0)	527	3	200829
1610	34.2	10.7	9.6	chr1	117335500	117336856	(131619566)	+	MamGyp-int	LTR/Gypsy	397	1716	(3387)	201162
21	3.1	2.9	2.8	chr1	118486643	118486689	(130469733)	+	(TCTTT)n	Simple_repeat	1	47	(0)	202823
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
701	1.3	0.0	0.0	chr1	144419267	144419341	(104537081)	+	tRNA-Asn-AAC	tRNA	1	75	(2)	209379
1290	7.3	0.0	0.6	chr1	144551779	144551943	(104404479)	C	U1	snRNA	(1)	164	1	209607
51	19.7	1.5	4.3	chr1	144998550	144998686	(103957736)	+	GA-rich	Low_complexity	1	139	(0)	210334
1305	7.9	0.0	0.6	chr1	145281116	145281281	(103675141)	+	U1	snRNA	1	165	(0)	210764
595	17.9	19.5	14.5	chr1	145281642	145281931	(103674491)	C	AluSz	SINE/Alu	(0)	312	5	210765
1502	1.2	0.0	0.0	chr1	145465617	145465780	(103490642)	C	U1	snRNA	(1)	164	1	210998
17	17.4	0.0	2.9	chr1	147540964	147540998	(101415424)	+	(CT)n	Simple_repeat	1	35	(0)	214257
115	0.0	2.8	0.0	chr1	147541071	147541178	(101415244)	+	(GA)n	Simple_repeat	1	111	(0)	214258
41	6.0	0.0	0.0	chr1	147541179	147541230	(101415192)	+	(TG)n	Simple_repeat	1	52	(0)	214259
1505	0.6	0.0	0.0	chr1	148038753	148038916	(100917506)	C	U1	snRNA	(1)	164	1	215030
620	20.9	6.1	1.9	chr1	148263477	148263632	(100692790)	+	U1	snRNA	2	164	(1)	215389
654	1.4	0.0	0.0	chr1	148265108	148265179	(100691243)	C	tRNA-Gln-CAG	tRNA	(3)	72	1	215393
676	20.6	4.9	0.0	chr1	148334612	148334766	(100621656)	C	U1	snRNA	(1)	164	2	215516
1359	4.3	1.2	0.0	chr1	148388490	148388651	(100567771)	C	U1	snRNA	(1)	164	1	215621
1272	7.9	0.0	0.6	chr1	148522601	148522766	(100433656)	+	U1	snRNA	1	165	(0)	215838
1017	20.6	0.0	0.0	chr1	149636766	149636930	(99319492)	+	U1	snRNA	1	165	(0)	217501
225	25.8	2.1	4.1	chr1	150269399	150269495	(98686927)	+	L3b	LINE/CR1	4968	5062	(170)	218650
1907	12.0	8.1	0.0	chr1	150269779	150270052	(98686370)	+	AluSz6	SINE/Alu	1	298	(14)	218651
17	14.7	0.0	4.8	chr1	150548970	150549011	(98407411)	+	(GCCGC)n	Simple_repeat	1	42	(0)	219330
2451	6.4	0.3	0.0	chr1	150876981	150877276	(98079146)	+	AluSq	SINE/Alu	1	297	(16)	220010
591	27.9	4.2	5.9	chr1	151510627	151510902	(97445520)	C	L2a	LINE/L2	(0)	3426	3152	221377
1911	13.6	5.4	0.0	chr1	151935560	151935839	(97020583)	C	AluJb	SINE/Alu	(16)	296	1	222145
310	32.7	10.7	6.0	chr1	151972727	151972993	(96983429)	C	L2b	LINE/L2	(1)	3425	3145	222206
289	33.3	12.0	6.2	chr1	153677518	153677776	(95278646)	+	L2c	LINE/L2	3102	3377	(10)	224527
1144	15.2	0.0	0.6	chr1	153967505	153967681	(94988741)	+	AluJb	SINE/Alu	137	312	(0)	225151
190	28.6	2.0	0.0	chr1	154197090	154197138	(94759284)	+	L2c	LINE/L2	3247	3296	(91)	225651
697	28.2	7.6	5.6	chr1	154197374	154197470	(94758952)	C	MIRb	SINE/MIR	(27)	241	143	225652
2317	11.8	0.0	0.0	chr1	154197471	154197775	(94758647)	C	AluSx1	SINE/Alu	(7)	305	1	225653
30	3.5	0.0	0.0	chr1	154607723	154607752	(94348670)	+	(AC)n	Simple_repeat	1	30	(0)	226475
17	23.2	0.0	2.1	chr1	155017543	155017589	(93938833)	+	(GCC)n	Simple_repeat	1	47	(0)	227202
493	33.9	5.4	1.6	chr1	155038608	155038856	(93917566)	+	L2c	LINE/L2	3044	3302	(85)	227241
59	9.6	1.1	0.0	chr1	155244786	155244875	(93711547)	+	(GAGA)n	Simple_repeat	1	91	(0)	227608
383	29.8	21.0	0.0	chr1	155540186	155540366	(93416056)	+	MIR	SINE/MIR	2	230	(32)	228239
2019	19.0	0.3	0.0	chr1	155540489	155540798	(93415624)	+	AluJo	SINE/Alu	2	312	(0)	228240
22	7.0	8.9	0.0	chr1	155856760	155856804	(93099618)	+	A-rich	Low_complexity	1	49	(0)	228964
304	26.3	0.0	0.0	chr1	156100444	156100519	(92855903)	+	MIRb	SINE/MIR	187	262	(6)	229477
350	29.9	1.6	3.8	chr1	156471729	156471860	(92484562)	+	MER124	DNA?	1	129	(268)	230208
17	18.4	0.0	4.3	chr1	156501041	156501087	(92455335)	+	G-rich	Low_complexity	1	47	(0)	230239
14	4.9	0.0	0.0	chr1	156501142	156501162	(92455260)	+	(CCGC)n	Simple_repeat	1	21	(0)	230240
312	28.1	4.1	1.4	chr1	160168921	160169061	(88787361)	C	MamTip1	DNA/hAT-Tip100	(34)	233	89	235351
2426	8.2	0.0	1.0	chr1	160990101	160990406	(87966016)	+	AluSq2	SINE/Alu	1	303	(10)	236639
71	1.6	0.0	0.0	chr1	161097673	161097737	(87858685)	+	(TC)n	Simple_repeat	1	65	(0)	236861
38	4.3	0.0	2.0	chr1	161097738	161097777	(87858645)	+	(TG)n	Simple_repeat	2	41	(0)	236862
346	27.4	11.1	3.0	chr1	161097880	161098011	(87858411)	C	MIR3	SINE/MIR	(63)	145	2	236863
19	12.4	0.0	0.0	chr1	161399246	161399280	(87557142)	+	(GCCGGA)n	Simple_repeat	1	35	(0)	237469
642	0.0	0.0	0.0	chr1	161422093	161422164	(87534258)	C	tRNA-Glu-GAA	tRNA	(3)	72	1	237515
6644	8.0	2.8	2.5	chr1	161422259	161424316	(87532106)	+	SVA_D	Retroposon/SVA	14	1386	(0)	237516
2440	6.2	0.0	1.3	chr1	161764874	161765180	(87191242)	C	AluSx3	SINE/Alu	(8)	303	1	238071
388	32.0	5.5	6.6	chr1	161885705	161885871	(87070551)	C	L2c	LINE/L2	(1)	3386	3222	238262
318	27.5	12.1	0.0	chr1	161885903	161886011	(87070411)	C	MIRb	SINE/MIR	(3)	265	142	238263
20	13.9	7.0	1.6	chr1	164559013	164559069	(84397353)	+	(CCCTCCT)n	Simple_repeat	1	61	(0)	242315
37	7.2	3.4	0.0	chr1	164559076	164559134	(84397288)	+	(CCT)n	Simple_repeat	1	61	(0)	242316
17	18.2	0.0	0.0	chr1	164559329	164559359	(84397063)	+	G-rich	Low_complexity	1	31	(0)	242317
12	15.1	0.0	9.1	chr1	165630442	165630485	(83325937)	+	(CCCCCG)n	Simple_repeat	1	44	(0)	243993
2156	13.2	0.0	1.6	chr1	167658414	167658730	(81297692)	C	AluSz	SINE/Alu	(0)	312	1	247084
943	29.2	9.0	6.6	chr1	167658731	167659280	(81297142)	C	L1ME3G	LINE/L1	(345)	579	15	247083
654	0.0	0.0	0.0	chr1	167714725	167714796	(81241626)	+	tRNA-Pro-CCG	tRNA	1	72	(3)	247181
319	18.8	1.5	3.0	chr1	168831892	168831957	(80124465)	+	L2a	LINE/L2	3362	3426	(0)	249015
15	0.0	0.0	4.3	chr1	169485720	169485742	(79470680)	+	(GCC)n	Simple_repeat	1	23	(0)	250009
186	27.4	0.0	7.5	chr1	170097456	170097522	(78858900)	C	X6B_LINE	LINE/CR1	(121)	951	890	250859
800	23.1	1.6	1.1	chr1	171142575	171142762	(77813660)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	252252
16	9.8	0.0	0.0	chr1	171142847	171142868	(77813554)	+	(T)n	Simple_repeat	1	22	(0)	252253
17	16.9	1.9	5.7	chr1	173714998	173715049	(75241373)	+	GA-rich	Low_complexity	1	53	(0)	255989
10018	9.3	3.0	0.0	chr1	174652320	174653725	(74302697)	C	L1PA7	LINE/L1	(5009)	1452	4	257475
67	0.0	5.6	0.0	chr1	175030000	175030070	(73926352)	+	(AC)n	Simple_repeat	1	75	(0)	258118
207	36.8	15.4	4.0	chr1	175840653	175840904	(73115518)	+	L3	LINE/CR1	3809	4094	(5)	259300
18	18.4	7.1	0.0	chr1	177340213	177340268	(71616154)	+	GA-rich	Low_complexity	1	60	(0)	261531
13	15.2	0.0	3.2	chr1	179082230	179082260	(69874162)	+	G-rich	Low_complexity	1	31	(0)	264111
14	27.6	0.0	5.9	chr1	179229448	179229515	(69726907)	+	(CCTGGC)n	Simple_repeat	1	68	(0)	264399
32	3.0	0.0	0.0	chr1	179229633	179229666	(69726756)	+	(CGC)n	Simple_repeat	1	34	(0)	264400
17	14.8	3.8	1.2	chr1	180230210	180230254	(68726168)	+	G-rich	Low_complexity	1	46	(0)	266085
16	19.3	0.0	2.3	chr1	181100477	181100519	(67855903)	+	(CCATACC)n	Simple_repeat	1	43	(0)	267467
313	25.3	4.0	3.0	chr1	182604884	182604993	(66351429)	C	MIR	SINE/MIR	(98)	164	61	269730
256	28.7	14.0	0.8	chr1	182840103	182840232	(66116190)	C	L2	LINE/L2	(639)	2780	2631	270134
54	11.6	2.8	2.7	chr1	183023087	183023194	(65933228)	+	(CCCTC)n	Simple_repeat	1	111	(0)	270460
520	30.4	5.0	12.5	chr1	183060449	183060752	(65895670)	+	L2c	LINE/L2	3108	3387	(0)	270508
18	23.7	0.0	6.8	chr1	183472319	183472363	(65484059)	+	(CCCTCT)n	Simple_repeat	1	70	(0)	271188
45	2.4	0.0	0.0	chr1	184037750	184037792	(64918630)	+	(TG)n	Simple_repeat	1	43	(0)	271995
41	4.1	1.9	1.9	chr1	184386769	184386820	(64569602)	+	(AC)n	Simple_repeat	1	53	(0)	272566
639	27.0	3.8	2.9	chr1	184424611	184424816	(64531606)	C	MIRb	SINE/MIR	(34)	234	27	272633
402	33.3	3.7	2.1	chr1	184424876	184425062	(64531360)	C	L3	LINE/CR1	(610)	3489	3300	272629
396	30.7	8.6	2.1	chr1	184861296	184861489	(64094933)	+	L2b	LINE/L2	3194	3425	(1)	273346
149	19.9	2.9	1.1	chr1	184861498	184861841	(64094581)	+	GA-rich	Low_complexity	1	354	(0)	273347
1779	24.8	11.0	0.5	chr1	184930961	184930987	(64025435)	+	Kanga1c	DNA/TcMar-Tc2	2	33	(696)	273446
2497	9.6	0.0	0.0	chr1	184930988	184931299	(64025123)	C	AluSx1	SINE/Alu	(0)	312	1	273447
241	32.2	13.2	6.8	chr1	185311708	185312047	(63644375)	+	L2c	LINE/L2	2970	3334	(53)	274051
34	0.0	0.0	2.9	chr1	186375989	186376022	(62580400)	+	(GT)n	Simple_repeat	1	34	(0)	275491
2205	11.7	0.3	0.0	chr1	193123229	193123526	(55832896)	C	AluSx1	SINE/Alu	(13)	299	1	284397
18222	12.8	3.6	2.1	chr1	195584778	195591249	(53365173)	+	L1MA1	LINE/L1	1028	7711	(10)	287597
561	32.6	2.8	7.0	chr1	198178453	198178686	(50777736)	C	MER103C	DNA/hAT-Charlie	(9)	288	64	290885
30	0.0	0.0	0.0	chr1	198178687	198178714	(50777708)	+	(TTG)n	Simple_repeat	1	28	(0)	290886
561	32.6	2.8	7.0	chr1	198178715	198178779	(50777643)	C	MER103C	DNA/hAT-Charlie	(234)	63	2	290885
2075	24.1	8.5	3.2	chr1	199463569	199464424	(49491998)	+	L1M1	LINE/L1	1772	2662	(4903)	292523
619	26.7	3.6	6.3	chr1	200279621	200279865	(48676557)	C	MIRb	SINE/MIR	(8)	260	7	293921
2808	13.3	3.1	2.5	chr1	200280149	200280634	(48675788)	C	L1MB5	LINE/L1	(7)	6167	5679	293922
479	26.7	17.6	2.0	chr1	200488361	200488743	(48467679)	C	L2a	LINE/L2	(210)	3216	2767	294352
14	15.9	0.0	0.0	chr1	200738938	200738965	(48217457)	+	(GCG)n	Simple_repeat	1	28	(0)	294914
14	16.3	4.0	9.1	chr1	200739105	200739178	(48217244)	+	(GACGG)n	Simple_repeat	1	77	(0)	294915
19	23.2	6.0	2.2	chr1	200739179	200739185	(48217237)	+	(GGCGAC)n	Simple_repeat	4	87	(0)	294916
264	18.2	0.0	0.0	chr1	201552289	201552332	(47404090)	+	L2b	LINE/L2	3326	3369	(6)	296251
521	30.2	9.3	2.2	chr1	201657213	201657480	(47298942)	C	L3	LINE/CR1	(73)	4026	3738	296430
13	16.5	0.0	0.0	chr1	201829212	201829238	(47127184)	+	(GGC)n	Simple_repeat	1	27	(0)	296704
960	16.1	5.2	1.2	chr1	201972535	201972702	(46983720)	C	AluSz6	SINE/Alu	(137)	175	1	296960
456	11.6	0.0	0.0	chr1	201972876	201972944	(46983478)	+	AluJb	SINE/Alu	1	69	(243)	296961
2181	16.4	6.0	10.3	chr1	201986840	201986986	(46969436)	C	L1MC3	LINE/L1	(456)	7329	7177	296992
12	23.1	5.1	3.2	chr1	202144164	202144222	(46812200)	+	(TGCCCCC)n	Simple_repeat	1	62	(0)	297384
51	0.0	0.0	0.0	chr1	202353587	202353630	(46602792)	+	(TG)n	Simple_repeat	1	44	(0)	297745
1790	19.1	0.0	1.1	chr1	202353631	202353912	(46602510)	C	AluJb	SINE/Alu	(33)	279	1	297746
254	30.8	0.0	0.0	chr1	202959196	202959260	(45997162)	+	MIRb	SINE/MIR	164	228	(40)	298821
404	13.2	2.6	8.4	chr1	202959286	202959368	(45997054)	C	AluJo	SINE/Alu	(12)	300	223	298822
239	22.8	8.1	4.8	chr1	202959372	202959454	(45996968)	C	MER105	DNA	(93)	110	25	298819
657	29.7	5.7	0.0	chr1	202959459	202959690	(45996732)	+	MIR	SINE/MIR	15	260	(2)	298823
546	30.5	7.5	2.3	chr1	203316981	203317195	(45639227)	C	MER102a	DNA/hAT-Charlie	(27)	303	77	299401
2620	5.3	0.0	0.0	chr1	203861065	203861367	(45095055)	+	AluSc8	SINE/Alu	1	303	(8)	300474
39	14.6	4.3	2.0	chr1	204129248	204129341	(44827081)	+	(CCTCCGC)n	Simple_repeat	1	98	(0)	301045
3567	21.3	5.7	9.9	chr1	204720446	204720718	(44235704)	C	L1MC4	LINE/L1	(863)	5283	5003	302130
46	0.0	0.0	0.0	chr1	204720719	204720760	(44235662)	+	(ATTT)n	Simple_repeat	1	42	(0)	302135
1954	11.4	0.0	1.1	chr1	204720761	204721041	(44235381)	C	AluSz6	SINE/Alu	(31)	281	4	302136
2059	5.2	4.9	0.0	chr1	205648011	205648261	(43308161)	+	AluY	SINE/Alu	21	284	(27)	303839
206	20.4	2.2	0.0	chr1	205648379	205648422	(43308000)	C	MIR	SINE/MIR	(158)	104	60	303841
321	30.6	10.8	5.7	chr1	205982109	205982423	(42973999)	+	L2	LINE/L2	2402	2734	(685)	304371
38	0.0	0.0	0.0	chr1	206504547	206504579	(42451843)	+	(GT)n	Simple_repeat	1	33	(0)	305203
15	15.3	2.6	2.6	chr1	207321816	207321853	(41634569)	+	(GCT)n	Simple_repeat	1	39	(0)	306485
16	17.8	2.1	4.1	chr1	207968940	207968961	(40987461)	+	(CTCTGT)n	Simple_repeat	1	48	(0)	307403
20	4.1	0.0	0.0	chr1	207968962	207968986	(40987436)	+	(TC)n	Simple_repeat	1	25	(0)	307404
31	11.0	0.0	0.0	chr1	208046542	208046590	(40909832)	+	(GT)n	Simple_repeat	1	49	(0)	307523
430	23.4	6.9	5.6	chr1	208046618	208046797	(40909625)	C	L2b	LINE/L2	(219)	3156	2978	307522
693	29.2	4.9	3.1	chr1	208059576	208059833	(40896589)	+	MIRc	SINE/MIR	6	268	(0)	307542
240	27.1	3.9	5.4	chr1	209827549	209827647	(39128775)	+	MIRb	SINE/MIR	102	198	(70)	310247
426	29.4	14.1	1.9	chr1	210330314	210330518	(38625904)	C	MIRb	SINE/MIR	(30)	238	5	310988
19	22.4	4.8	0.0	chr1	211578138	211578199	(37378223)	+	(GGCCGT)n	Simple_repeat	1	65	(0)	312973
919	10.6	0.0	0.8	chr1	211584334	211584456	(37371966)	C	AluSx	SINE/Alu	(187)	125	4	312982
219	32.0	2.2	0.0	chr1	211584737	211584836	(37371586)	C	MIR	SINE/MIR	(43)	165	63	312983
61	25.9	3.3	2.3	chr1	213988061	213988073	(34968349)	+	(CTCTT)n	Simple_repeat	1	33	(186)	317039
24	22.4	8.4	3.5	chr1	213988074	213988204	(34968218)	+	(TCT)n	Simple_repeat	1	142	(0)	317040
61	25.9	3.3	2.3	chr1	213988205	213988272	(34968150)	+	(CTCTT)n	Simple_repeat	34	219	(0)	317039
622	35.1	1.3	2.4	chr1	214439734	214440110	(34516312)	C	CR1_Mam	LINE/CR1	(612)	1592	1220	317695
13	0.0	0.0	4.8	chr1	215567283	215567303	(33389119)	+	(TCC)n	Simple_repeat	1	21	(0)	319244
12	15.8	0.0	3.3	chr1	215567376	215567405	(33389017)	+	(GGC)n	Simple_repeat	1	30	(0)	319245
243	34.0	8.0	2.0	chr1	215582085	215582378	(33374044)	C	L1M5	LINE/L1	(1122)	5024	4712	319266
2771	9.1	0.3	0.3	chr1	220803044	220803407	(28153015)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	326766
18	0.0	0.0	0.0	chr1	223363361	223363382	(25593040)	+	(TGC)n	Simple_repeat	1	22	(0)	330583
756	24.4	1.6	2.4	chr1	223711940	223712168	(25244254)	+	MIRb	SINE/MIR	12	238	(30)	331089
15	21.8	0.0	0.0	chr1	223748970	223749006	(25207416)	+	GA-rich	Low_complexity	1	37	(0)	331158
860	34.3	8.5	3.4	chr1	223819805	223820408	(25136014)	C	L2a	LINE/L2	(0)	3426	2786	331274
1820	16.9	5.3	1.2	chr1	224113386	224113726	(24842696)	C	L1MB7	LINE/L1	(17)	6167	5812	331816
2258	23.1	7.3	5.5	chr1	224113727	224113840	(24842582)	C	L1MC4	LINE/L1	(835)	7207	7102	331809
260	24.4	1.2	13.7	chr1	224184055	224184149	(24772273)	C	MIRc	SINE/MIR	(62)	206	124	331976
377	18.1	2.7	0.0	chr1	224275584	224275655	(24680767)	+	MADE2	DNA/TcMar-Mariner	7	80	(0)	332214
352	21.1	2.6	0.0	chr1	224276814	224276889	(24679533)	C	MADE2	DNA/TcMar-Mariner	(0)	80	3	332216
360	34.2	12.9	1.5	chr1	224317312	224317572	(24638850)	C	L2c	LINE/L2	(116)	3271	2977	332318
195	34.9	0.0	1.5	chr1	224317608	224317674	(24638748)	C	L2c	LINE/L2	(556)	2863	2798	332318
13	14.6	8.5	2.0	chr1	224357171	224357217	(24599205)	+	(CTGCC)n	Simple_repeat	1	51	(0)	332414
2232	10.2	2.0	0.0	chr1	224377487	224377779	(24578643)	C	AluSz	SINE/Alu	(13)	299	1	332452
30	6.3	3.9	1.9	chr1	224434205	224434256	(24522166)	+	(GGA)n	Simple_repeat	1	54	(0)	332549
41	21.7	1.3	6.5	chr1	224434409	224434559	(24521863)	+	G-rich	Low_complexity	1	153	(0)	332550
17	23.8	3.6	0.0	chr1	224434953	224435007	(24521415)	+	(CCGACC)n	Simple_repeat	1	57	(0)	332552
12494	14.8	2.5	0.4	chr1	224481311	224483196	(24473226)	C	L1M1	LINE/L1	(5496)	2069	143	332636
345	26.5	3.9	0.0	chr1	224504028	224504125	(24452297)	+	MIRc	SINE/MIR	107	208	(60)	332679
14	35.6	0.0	0.0	chr1	224506251	224506287	(24450135)	+	(ACACAC)n	Simple_repeat	1	54	(0)	332686
18	12.1	0.0	0.0	chr1	224506261	224506288	(24450134)	+	(GC)n	Simple_repeat	1	28	(0)	332687
15	0.0	0.0	0.0	chr1	224506288	224506304	(24450118)	+	(CA)n	Simple_repeat	1	17	(0)	332688
427	15.2	2.1	5.2	chr1	224650373	224650469	(24305953)	+	UCON47	Unknown	69	162	(3)	332926
12	20.2	2.9	0.0	chr1	224650595	224650628	(24305794)	+	GA-rich	Low_complexity	1	35	(0)	332927
14	11.6	3.5	0.0	chr1	224873431	224873459	(24082963)	+	(TCAT)n	Simple_repeat	1	30	(0)	333289
25	21.2	3.8	2.4	chr1	224873458	224873537	(24082885)	+	(TCTCC)n	Simple_repeat	1	83	(0)	333290
13	19.2	1.6	9.2	chr1	224929879	224929942	(24026480)	+	(GGCG)n	Simple_repeat	1	65	(0)	333381
316	23.4	7.8	4.1	chr1	225600395	225600446	(23355976)	+	L1M5	LINE/L1	2974	3025	(3121)	334209
503	6.6	5.0	0.0	chr1	225600447	225600522	(23355900)	+	MADE1	DNA/TcMar-Mariner	1	80	(0)	334210
316	23.4	7.8	4.1	chr1	225600523	225600567	(23355855)	+	L1M5	LINE/L1	3026	3074	(3072)	334209
1412	20.4	3.8	0.8	chr1	225600576	225600830	(23355592)	+	AluJo	SINE/Alu	1	263	(49)	334211
1631	24.4	14.3	7.6	chr1	225607680	225608533	(23347889)	+	HAL1	LINE/L1	539	1479	(1028)	334221
2430	10.1	0.0	0.0	chr1	225608534	225608841	(23347581)	+	AluSx1	SINE/Alu	1	308	(4)	334223
1758	14.0	5.5	0.4	chr1	225809562	225809839	(23146583)	+	AluJo	SINE/Alu	2	294	(18)	334624
800	22.9	3.4	3.8	chr1	225809840	225809942	(23146480)	C	MER5C	DNA/hAT-Charlie	(128)	185	79	334623
1646	11.8	0.0	20.8	chr1	226036146	226036298	(22920124)	+	AluSx3	SINE/Alu	1	130	(181)	335067
20	17.0	1.7	5.1	chr1	226062730	226062787	(22893635)	+	(CGC)n	Simple_repeat	1	59	(0)	335131
830	29.6	12.2	2.4	chr1	226134517	226135223	(22821199)	+	L2b	LINE/L2	2590	3371	(4)	335274
462	29.3	7.6	3.1	chr1	226187088	226187249	(22769173)	C	MIRc	SINE/MIR	(11)	257	88	335386
2793	12.8	2.6	16.7	chr1	226479326	226479467	(22476955)	C	LTR45C	LTR/ERV1	(389)	150	1	335987
2378	27.1	9.5	1.8	chr1	226479468	226480338	(22476084)	C	HAL1	LINE/L1	(283)	2224	1269	335986
44	0.0	0.0	0.0	chr1	226711406	226711443	(22244979)	+	(AG)n	Simple_repeat	1	38	(0)	336323
26	3.0	2.9	0.0	chr1	226711444	226711477	(22244945)	+	(TG)n	Simple_repeat	1	35	(0)	336324
1215	23.1	16.8	0.9	chr1	226714090	226714434	(22241988)	+	MLT1I	LTR/ERVL-MaLR	1	411	(0)	336327
330	29.3	11.8	0.9	chr1	226778650	226778829	(22177593)	+	MIRc	SINE/MIR	54	247	(21)	336458
416	26.9	12.7	6.6	chr1	226874661	226874903	(22081519)	C	MIRb	SINE/MIR	(5)	263	4	336626
527	22.8	12.4	0.0	chr1	227736375	227736501	(21219921)	C	LTR42	LTR/ERVL	(6)	489	345	337831
34	0.0	0.0	0.0	chr1	228458656	228458684	(20497738)	+	(GT)n	Simple_repeat	1	29	(0)	338742
2252	9.1	0.0	0.3	chr1	228458853	228459160	(20497262)	C	AluSc	SINE/Alu	(2)	307	1	338743
2188	8.2	0.7	1.0	chr1	228486230	228486535	(20469887)	+	AluSg	SINE/Alu	1	305	(5)	338796
563	22.5	0.0	1.6	chr1	228647911	228648032	(20308390)	C	5S	rRNA	(1)	120	1	338982
15	21.3	9.3	0.0	chr1	228735308	228735361	(20221061)	+	(CG)n	Simple_repeat	1	59	(0)	339120
18	10.0	0.0	2.9	chr1	228735416	228735449	(20220973)	+	(CCCG)n	Simple_repeat	1	34	(0)	339121
1532	23.1	5.8	1.8	chr1	228750797	228751197	(20205225)	C	MLT1H2	LTR/ERVL-MaLR	(3)	486	69	339138
13	13.0	5.9	0.0	chr1	229028695	229028728	(19927694)	+	(CACCTCC)n	Simple_repeat	1	36	(0)	339583
992	19.2	13.6	3.6	chr1	229028853	229029128	(19927294)	C	MER33	DNA/hAT-Charlie	(0)	324	17	339584
56	16.4	4.3	6.2	chr1	229411319	229411505	(19544917)	+	(CCCTCTC)n	Simple_repeat	1	195	(0)	340223
321	30.1	18.6	1.8	chr1	230110436	230110604	(18845818)	+	MIR	SINE/MIR	33	236	(26)	341431
10050	17.2	4.6	2.3	chr1	230185322	230186131	(18770291)	C	L1MC1	LINE/L1	(5684)	824	2	341513
35	2.5	2.4	0.0	chr1	230662021	230662061	(18294361)	+	(CCTCT)n	Simple_repeat	1	42	(0)	342215
327	35.0	9.1	6.2	chr1	230938854	230939292	(18017130)	+	L2c	LINE/L2	2916	3368	(19)	342646
294	34.8	10.0	5.1	chr1	231418420	231418581	(17537841)	+	MIRb	SINE/MIR	10	190	(78)	343467
619	24.4	7.7	0.6	chr1	231422715	231422871	(17533551)	C	MIRb	SINE/MIR	(96)	172	4	343475
242	29.0	8.0	2.1	chr1	231534552	231534692	(17421730)	C	Charlie23a	DNA/hAT-Charlie	(156)	183	34	343662
216	26.5	9.3	0.0	chr1	231534783	231534850	(17421572)	C	L2a	LINE/L2	(5)	3421	3347	343663
219	28.1	1.2	6.8	chr1	232678555	232678642	(16277780)	+	MIR	SINE/MIR	88	170	(92)	345246
181	36.4	5.7	1.5	chr1	233241942	233242008	(15714414)	C	Tigger19b	DNA/TcMar-Tigger	(329)	221	152	346088
300	31.0	9.8	0.0	chr1	234373847	234373975	(14582447)	C	MIRb	SINE/MIR	(86)	182	40	347763
24	14.3	0.0	0.0	chr1	234374097	234374135	(14582287)	+	(T)n	Simple_repeat	1	39	(0)	347764
15	13.9	0.0	0.0	chr1	234507342	234507365	(14449057)	+	(C)n	Simple_repeat	1	24	(0)	347991
37	0.0	0.0	0.0	chr1	234523943	234523983	(14432439)	+	(TA)n	Simple_repeat	1	41	(0)	348029
53	0.0	0.0	0.0	chr1	234523984	234524028	(14432394)	+	(AG)n	Simple_repeat	1	45	(0)	348030
30	19.7	3.3	3.2	chr1	234544489	234544580	(14411842)	+	G-rich	Low_complexity	1	95	(0)	348058
16	0.0	0.0	0.0	chr1	234599677	234599693	(14356729)	+	(A)n	Simple_repeat	1	17	(0)	348156
35	25.3	1.0	2.0	chr1	234724082	234724179	(14232243)	+	GA-rich	Low_complexity	1	99	(0)	348335
550	31.0	0.6	2.8	chr1	234776060	234776238	(14180184)	+	MIRb	SINE/MIR	3	177	(91)	348422
482	23.8	6.0	0.0	chr1	235253500	235253625	(13702797)	+	L1MA9	LINE/L1	6179	6312	(0)	349323
13	22.5	3.6	3.5	chr1	235504156	235504218	(13452204)	+	(CGCAGG)n	Simple_repeat	1	63	(0)	349877
27	23.7	5.3	2.0	chr1	235919464	235919530	(13036892)	+	(TC)n	Simple_repeat	1	70	(0)	350632
3189	17.8	3.9	0.8	chr1	235919531	235920171	(13036251)	C	L1MB5	LINE/L1	(0)	6174	5513	350633
830	11.1	0.0	0.0	chr1	236472534	236472641	(12483781)	C	AluSx3	SINE/Alu	(17)	294	187	351708
535	23.0	8.4	1.9	chr1	236472688	236472842	(12483580)	C	MIRb	SINE/MIR	(17)	251	86	351709
1937	9.6	4.4	0.0	chr1	236605121	236605380	(12351042)	+	AluSx1	SINE/Alu	21	292	(20)	351935
271	26.0	7.2	13.3	chr1	236794616	236794810	(12161612)	+	L2b	LINE/L2	3195	3376	(11)	352266
257	27.5	11.8	7.8	chr1	236794837	236794990	(12161432)	C	MIRc	SINE/MIR	(24)	244	84	352267
1198	21.0	12.8	5.2	chr1	241423790	241424236	(7532186)	+	MER52D	LTR/ERV1	3	488	(1635)	359283
758	19.8	3.7	0.0	chr1	241847630	241847786	(7108636)	C	MER67A	LTR/ERV1	(0)	543	381	359940
379	28.3	15.7	0.5	chr1	244239250	244239448	(4716974)	C	MIRb	SINE/MIR	(8)	260	26	363796
16	13.7	0.0	0.0	chr1	244239509	244239533	(4716889)	+	(GT)n	Simple_repeat	1	25	(0)	363797
27	6.1	0.0	0.0	chr1	244239533	244239567	(4716855)	+	(GA)n	Simple_repeat	1	35	(0)	363798
320	32.8	11.0	4.1	chr1	244239644	244239913	(4716509)	C	MamRTE1	LINE/RTE-BovB	(137)	3675	3385	363799
19	24.9	1.4	4.1	chr1	244451927	244451998	(4504424)	+	(CCCGC)n	Simple_repeat	1	73	(0)	364209
5402	13.4	4.7	4.8	chr1	244719462	244719965	(4236457)	C	L1MC2	LINE/L1	(649)	5695	5205	364608
492	28.0	5.6	0.0	chr1	244719935	244720120	(4236302)	C	L1ME3D	LINE/L1	(1785)	4534	4338	364594
24	23.7	4.7	1.1	chr1	244864370	244864458	(4091964)	+	(GGCTGC)n	Simple_repeat	1	92	(0)	364914
2497	10.9	0.0	0.0	chr1	245017946	245018247	(3938175)	+	AluSx1	SINE/Alu	2	303	(9)	365301
12	19.9	9.6	0.0	chr10	1048949	1049000	(132748422)	+	(CCAGCG)n	Simple_repeat	1	57	(0)	372219
715	24.5	3.4	7.0	chr10	4981763	4982034	(128815388)	+	L1PBa	LINE/L1	532	793	(6070)	377179
54	0.0	0.0	0.0	chr10	5549321	5549366	(128248056)	+	(CA)n	Simple_repeat	1	46	(0)	377909
739	29.0	1.6	5.0	chr10	5549450	5549561	(128247861)	C	MIR	SINE/MIR	(1)	261	156	377910
1610	16.4	12.9	10.4	chr10	5549562	5549982	(128247440)	C	MER57C2	LTR/ERV1	(0)	434	2	377911
12	12.0	3.7	0.0	chr10	6203364	6203390	(127594032)	+	(GCCGG)n	Simple_repeat	1	28	(0)	379103
813	23.9	9.0	1.1	chr10	7487253	7487358	(126310064)	C	HAL1	LINE/L1	(175)	2332	2212	381105
54	2.0	0.0	0.0	chr10	7487359	7487409	(126310013)	+	(CA)n	Simple_repeat	1	51	(0)	381106
813	23.9	9.0	1.1	chr10	7487410	7487569	(126309853)	C	HAL1	LINE/L1	(296)	2211	2043	381105
257	29.4	2.7	0.9	chr10	7487602	7487711	(126309711)	C	HAL1	LINE/L1	(652)	1855	1744	381105
328	28.5	0.0	3.1	chr10	10855289	10855415	(122942007)	+	MER130	DNA	946	1068	(526)	386201
477	25.8	5.6	6.5	chr10	11612005	11612203	(122185219)	+	MIR	SINE/MIR	12	208	(54)	387154
843	10.2	0.0	5.5	chr10	12374970	12375097	(121422325)	C	AluJr	SINE/Alu	(188)	124	4	388811
290	33.2	8.2	9.7	chr10	12375391	12375637	(121421785)	+	Tigger19a	DNA/TcMar-Tigger	18	260	(63)	388812
1330	29.1	2.5	5.0	chr10	12457805	12457995	(121339427)	+	L1MC4a	LINE/L1	5937	5997	(1885)	388974
388	34.5	1.9	3.7	chr10	12458129	12458331	(121339091)	C	L2a	LINE/L2	(0)	3426	3176	388977
28	0.0	0.0	0.0	chr10	13161892	13161918	(120635504)	+	(ATTC)n	Simple_repeat	1	27	(0)	390208
83	28.9	1.2	0.8	chr10	14604707	14604958	(119192464)	+	(CT)n	Simple_repeat	1	255	(0)	392731
711	9.9	0.0	2.2	chr10	14878087	14878177	(118919245)	+	AluJb	SINE/Alu	200	288	(24)	393216
13	15.5	4.1	5.9	chr10	15097302	15097350	(118700072)	+	(GCGAG)n	Simple_repeat	1	51	(0)	393620
3449	8.9	2.6	2.0	chr10	15409296	15409798	(118387624)	+	L1PB	LINE/L1	4788	5293	(853)	394211
1407	23.5	11.1	6.9	chr10	15431312	15431600	(118365822)	C	L1MC5	LINE/L1	(239)	9065	8791	394247
3556	11.9	0.9	4.2	chr10	15431601	15431975	(118365447)	+	MER1A	DNA/hAT-Charlie	3	376	(153)	394249
80	25.1	2.2	2.8	chr10	15434269	15434586	(118362836)	+	(TC)n	Simple_repeat	1	316	(0)	394253
48	0.0	0.0	0.0	chr10	15434587	15434627	(118362795)	+	(CA)n	Simple_repeat	1	41	(0)	394254
205	31.6	14.8	4.4	chr10	15796258	15796462	(118000960)	+	MIRb	SINE/MIR	35	264	(4)	394821
25	16.1	0.0	0.0	chr10	15796477	15796525	(118000897)	+	A-rich	Low_complexity	1	49	(0)	394822
1347	32.3	3.4	0.8	chr10	15856844	15857383	(117940039)	+	L2a	LINE/L2	2650	3205	(221)	394901
625	23.3	19.5	1.9	chr10	15858474	15858679	(117938743)	C	MIRb	SINE/MIR	(0)	262	12	394902
414	36.3	10.7	1.3	chr10	17199565	17199868	(116597554)	C	L2	LINE/L2	(437)	2982	2647	396957
422	38.2	5.6	4.9	chr10	17599793	17600283	(116197139)	+	L2c	LINE/L2	2675	3164	(223)	397707
1989	11.5	4.9	0.0	chr10	17600318	17600625	(116196797)	C	AluSx	SINE/Alu	(0)	312	1	397708
1004	5.2	1.5	5.0	chr10	20886049	20886189	(112911233)	+	L1PA10	LINE/L1	6025	6160	(8)	402647
2345	11.2	0.3	0.0	chr10	21171054	21171365	(112626057)	+	AluSp	SINE/Alu	1	313	(0)	403074
595	25.5	0.7	2.0	chr10	21171560	21171711	(112625711)	+	MIR	SINE/MIR	108	257	(5)	403075
14	10.7	0.0	5.9	chr10	21527274	21527307	(112270115)	+	G-rich	Low_complexity	1	34	(0)	403873
673	0.0	0.0	0.0	chr10	22229508	22229582	(111567840)	C	tRNA-Asn-AAC	tRNA	(2)	75	1	404961
987	27.5	2.4	5.0	chr10	22295042	22295236	(111502186)	+	L2a	LINE/L2	3098	3283	(143)	405075
2107	13.8	2.7	0.0	chr10	22295237	22295527	(111501895)	C	AluSz	SINE/Alu	(13)	299	1	405076
17500	13.7	1.9	2.6	chr10	22508089	22514502	(111282920)	C	L1PA7	LINE/L1	(0)	6339	14	405385
269	30.2	10.4	10.8	chr10	27244769	27245100	(106552322)	C	L2c	LINE/L2	(2)	3385	3078	413151
963	20.4	0.0	2.5	chr10	27245101	27245262	(106552160)	+	AluJo	SINE/Alu	137	294	(18)	413152
269	30.2	10.4	10.8	chr10	27245263	27245345	(106552077)	C	L2c	LINE/L2	(310)	3077	2972	413151
16581	8.8	0.8	1.4	chr10	27899016	27903737	(105893685)	+	L1P3	LINE/L1	8	4743	(1718)	414163
1654	18.1	4.7	0.0	chr10	28248634	28248959	(105548463)	+	Tigger3a	DNA/TcMar-Tigger	6	347	(1)	414695
2046	14.6	0.3	0.3	chr10	28376189	28376483	(105420939)	+	AluJb	SINE/Alu	1	295	(17)	414956
13	4.3	3.9	3.7	chr10	32347086	32347114	(101450308)	+	(CCGCT)n	Simple_repeat	1	29	(0)	421822
231	26.9	5.3	1.8	chr10	34684628	34684737	(99112685)	+	L2b	LINE/L2	2727	2840	(579)	425083
77	12.8	0.0	0.0	chr10	34684779	34684911	(99112511)	+	(AC)n	Simple_repeat	1	133	(0)	425084
200	23.3	0.0	0.0	chr10	34684921	34684963	(99112459)	+	L2b	LINE/L2	3313	3355	(20)	425083
1775	17.7	0.4	0.0	chr10	34862788	34863064	(98934358)	C	AluJb	SINE/Alu	(34)	278	1	425453
779	27.1	9.1	4.3	chr10	34885969	34886269	(98911153)	C	MamGypLTR3a	LTR/Gypsy	(601)	380	64	425498
652	16.8	4.9	1.7	chr10	35335576	35335694	(98461728)	+	AluJr	SINE/Alu	2	124	(188)	426449
18	7.8	3.7	0.0	chr10	35335699	35335725	(98461697)	+	(AC)n	Simple_repeat	1	28	(0)	426450
352	15.8	0.0	14.8	chr10	35335758	35335858	(98461564)	+	AluJr4	SINE/Alu	97	182	(130)	426451
16	0.0	0.0	0.0	chr10	35335859	35335876	(98461546)	+	(AC)n	Simple_repeat	1	18	(0)	426452
33	0.0	0.0	0.0	chr10	35335900	35335927	(98461495)	+	(AC)n	Simple_repeat	1	28	(0)	426452
1197	12.6	0.0	2.2	chr10	35335929	35336111	(98461311)	+	AluJr	SINE/Alu	134	312	(0)	426453
60	27.1	6.0	0.0	chr10	35643632	35643847	(98153575)	+	(TC)n	Simple_repeat	1	229	(0)	426874
26	27.9	1.3	1.3	chr10	36677055	36677131	(97120291)	+	(GT)n	Simple_repeat	1	78	(0)	428394
14	8.1	0.0	6.7	chr10	45594704	45594733	(88202689)	+	(GGC)n	Simple_repeat	1	30	(0)	436272
12	20.4	0.0	0.0	chr10	46030399	46030427	(87766995)	+	GA-rich	Low_complexity	1	29	(0)	437045
456	19.5	3.7	3.3	chr10	46525398	46526683	(87270739)	+	(CA)n	Simple_repeat	1	1334	(0)	437801
4931	15.2	3.5	2.5	chr10	50462989	50464194	(83333228)	+	L1MB2	LINE/L1	4951	6171	(0)	443393
1286	18.6	5.9	4.7	chr10	50464199	50464443	(83332979)	+	MLT1D	LTR/ERVL-MaLR	127	379	(126)	443394
2139	12.1	0.7	0.3	chr10	50464444	50464733	(83332689)	C	AluSx1	SINE/Alu	(21)	291	1	443395
16	9.1	2.6	5.0	chr10	50623872	50623910	(83173512)	+	(CCCGCCG)n	Simple_repeat	1	40	(0)	443660
717	29.1	14.3	4.0	chr10	51106815	51107381	(82690041)	C	L2a	LINE/L2	(0)	3426	2793	444361
246	31.1	4.2	0.0	chr10	58384868	58384957	(75412465)	C	MER5A	DNA/hAT-Charlie	(36)	153	60	454064
43	2.5	0.0	0.0	chr10	61757685	61757725	(72039697)	+	(AC)n	Simple_repeat	1	41	(0)	459006
11	22.5	3.5	5.1	chr10	63521661	63521717	(70275705)	+	(GGCCTG)n	Simple_repeat	1	59	(0)	461938
380	24.3	4.2	2.2	chr10	63544642	63544780	(70252642)	+	L1ME3F	LINE/L1	6073	6214	(29)	461977
12	4.3	8.3	0.0	chr10	63627933	63627956	(70169466)	+	(CTTTC)n	Simple_repeat	1	26	(0)	462127
2318	6.6	0.0	4.7	chr10	68527733	68527827	(65269595)	+	AluSx1	SINE/Alu	1	93	(219)	469456
2359	8.3	0.0	0.0	chr10	68527828	68528117	(65269305)	+	AluSx4	SINE/Alu	2	291	(19)	469457
2241	9.0	1.7	0.0	chr10	68798706	68798995	(64998427)	+	AluSg7	SINE/Alu	2	296	(13)	470164
226	29.9	6.1	6.1	chr10	69438980	69439093	(64358329)	C	L2b	LINE/L2	(17)	3358	3245	471602
195	24.1	19.4	0.0	chr10	69629719	69629805	(64167617)	+	L2c	LINE/L2	3041	3148	(227)	471960
217	27.1	1.7	1.7	chr10	69629827	69629886	(64167536)	+	L2c	LINE/L2	3264	3323	(64)	471960
17	21.3	4.0	6.3	chr10	69630003	69630078	(64167344)	+	(CTT)n	Simple_repeat	1	79	(0)	471961
14	18.5	2.7	9.2	chr10	69630061	69630134	(64167288)	+	(CCTCCCA)n	Simple_repeat	1	76	(0)	471962
426	25.2	5.0	0.9	chr10	70233923	70234038	(63563384)	+	MIR	SINE/MIR	105	225	(37)	473006
520	32.0	5.2	1.5	chr10	71696328	71696530	(62100892)	C	MIRb	SINE/MIR	(15)	253	43	475754
630	28.7	5.2	1.5	chr10	71706343	71706547	(62090875)	+	MIRb	SINE/MIR	48	260	(8)	475768
205	31.2	5.1	4.1	chr10	72228273	72228369	(61569053)	+	AmnSINE1	SINE/5S-Deu-L2	383	480	(95)	476818
440	32.4	5.7	7.0	chr10	72243660	72244031	(61553391)	C	L2c	LINE/L2	(107)	3280	2914	476850
20	21.0	0.0	0.0	chr10	72278772	72278810	(61518612)	+	(T)n	Simple_repeat	1	39	(0)	476930
16	14.4	2.5	2.4	chr10	73998373	73998412	(59799010)	+	G-rich	Low_complexity	1	41	(0)	480357
2444	9.4	0.0	0.0	chr10	74266277	74266584	(59530838)	+	AluSg7	SINE/Alu	1	308	(1)	480890
2044	27.1	6.3	6.0	chr10	74377207	74377917	(59419505)	C	MER72	LTR/ERV1	(0)	722	10	481089
19	15.9	3.9	1.9	chr10	74825912	74825962	(58971460)	+	G-rich	Low_complexity	1	53	(0)	481942
14	18.2	0.0	0.0	chr10	74826033	74826063	(58971359)	+	(CGCG)n	Simple_repeat	1	31	(0)	481943
2463	11.0	0.3	0.0	chr10	74876632	74876940	(58920482)	+	AluSx	SINE/Alu	1	310	(2)	482052
588	20.2	9.0	2.1	chr10	75393404	75393576	(58403846)	+	L1MC5	LINE/L1	9104	9292	(12)	483037
390	23.6	1.1	0.0	chr10	77305886	77305974	(56491448)	C	UCON29	DNA/PiggyBac?	(34)	405	316	485675
295	24.4	1.2	2.4	chr10	79344150	79344223	(54453199)	+	L2b	LINE/L2	3288	3360	(15)	489462
331	30.0	5.2	1.0	chr10	79344224	79344364	(54453058)	+	MIR3	SINE/MIR	4	154	(114)	489463
597	29.7	4.1	8.9	chr10	79344365	79344723	(54452699)	+	MER102b	DNA/hAT-Charlie	1	341	(0)	489464
923	18.3	17.2	0.3	chr10	80205905	80206192	(53591230)	+	L1MC3	LINE/L1	7178	7515	(270)	490863
2190	20.1	3.7	8.7	chr10	80416937	80417585	(53379837)	C	LTR6A	LTR/ERV1	(0)	564	1	491186
185	33.0	3.0	4.9	chr10	84184897	84184998	(49612424)	+	MIR3	SINE/MIR	26	125	(83)	496449
425	28.8	9.2	9.8	chr10	86360194	86360520	(47436902)	+	L1ME4a	LINE/L1	5799	6123	(1)	499362
237	31.7	9.6	0.8	chr10	86360559	86360682	(47436740)	+	X7A_LINE	LINE/CR1	104	239	(11)	499363
555	28.7	9.9	2.5	chr10	86360656	86360898	(47436524)	C	MIRb	SINE/MIR	(3)	265	3	499364
2070	10.4	2.5	0.4	chr10	86528994	86529305	(47268117)	C	AluSz	SINE/Alu	(0)	312	1	499670
490	27.7	3.4	2.1	chr10	86529314	86529414	(47268008)	+	L2a	LINE/L2	3276	3377	(49)	499671
1428	18.3	4.0	0.3	chr10	86529415	86529726	(47267696)	+	MER33	DNA/hAT-Charlie	1	324	(0)	499672
44	0.0	0.0	0.0	chr10	86796491	86796530	(47000892)	+	(ATTT)n	Simple_repeat	1	40	(0)	500169
1267	19.5	1.8	0.0	chr10	86796567	86796787	(47000635)	C	AluJb	SINE/Alu	(2)	310	86	500170
30	8.2	0.0	0.0	chr10	87879104	87879142	(45918280)	+	(TG)n	Simple_repeat	1	39	(0)	501950
701	29.0	2.9	2.9	chr10	88991924	88992161	(44805261)	C	MIRb	SINE/MIR	(16)	252	15	503687
268	31.8	15.2	5.3	chr10	89024674	89024862	(44772560)	+	L2c	LINE/L2	3173	3383	(4)	503735
195	21.2	0.0	0.0	chr10	89185965	89185997	(44611425)	C	MamRTE1	LINE/RTE-BovB	(2315)	1497	1465	504005
55	3.7	0.0	0.0	chr10	91609148	91609203	(42188219)	+	(TC)n	Simple_repeat	1	56	(0)	507574
35	12.3	0.0	0.0	chr10	91609204	91609249	(42188173)	+	(AC)n	Simple_repeat	1	46	(0)	507575
235	22.4	0.0	0.0	chr10	92569724	92569772	(41227650)	C	L2a	LINE/L2	(0)	3426	3378	509411
2214	10.7	1.0	0.0	chr10	92569830	92570119	(41227303)	+	AluSx	SINE/Alu	3	295	(17)	509412
309	31.3	2.0	3.9	chr10	93695745	93695847	(40101575)	+	MIR3	SINE/MIR	19	119	(89)	511611
1118	17.1	1.6	0.0	chr10	93695849	93696029	(40101393)	C	MER58A	DNA/hAT-Charlie	(2)	222	39	511612
2077	16.3	3.6	2.3	chr10	93696034	93696417	(40101005)	+	L1MDa	LINE/L1	19	407	(6226)	511613
28	0.0	0.0	0.0	chr10	93702523	93702548	(40094874)	+	(CCG)n	Simple_repeat	1	26	(0)	511624
516	22.7	8.3	0.7	chr10	95561764	95561918	(38235504)	+	MIR	SINE/MIR	94	261	(1)	514502
234	36.4	0.0	6.0	chr10	96643021	96643137	(37154285)	+	L2b	LINE/L2	3266	3375	(0)	516337
348	18.3	1.6	0.0	chr10	97448308	97448367	(36349055)	C	L2a	LINE/L2	(2)	3424	3364	518013
2282	9.6	0.0	1.6	chr10	97448472	97448774	(36348648)	+	AluSx1	SINE/Alu	2	299	(13)	518014
437	28.9	3.8	0.7	chr10	97497898	97498050	(36299372)	+	MIRc	SINE/MIR	3	160	(108)	518102
14	18.2	0.0	0.0	chr10	97737144	97737174	(36060248)	+	(GCG)n	Simple_repeat	1	31	(0)	518629
21412	9.9	1.4	1.1	chr10	99132446	99138883	(34658539)	+	L1PA7	LINE/L1	5	6448	(21)	520981
1933	9.5	10.6	2.5	chr10	99392710	99392994	(34404428)	+	AluSz	SINE/Alu	2	312	(0)	521388
15	0.0	0.0	0.0	chr10	100228977	100228993	(33568429)	+	(GC)n	Simple_repeat	1	17	(0)	522978
38	0.0	0.0	0.0	chr10	100228994	100229026	(33568396)	+	(CA)n	Simple_repeat	1	33	(0)	522979
18	28.7	1.6	1.6	chr10	100229115	100229175	(33568247)	+	(CA)n	Simple_repeat	1	62	(0)	522980
13	18.7	4.9	8.2	chr10	101031746	101031826	(32765596)	+	G-rich	Low_complexity	1	85	(0)	524362
13	14.2	3.2	0.0	chr10	101354262	101354292	(32443130)	+	(GGCGCT)n	Simple_repeat	1	32	(0)	524954
21	4.0	0.0	0.0	chr10	101442263	101442288	(32355134)	+	(TC)n	Simple_repeat	1	26	(0)	525127
31	3.3	0.0	0.0	chr10	101442289	101442319	(32355103)	+	(TG)n	Simple_repeat	1	31	(0)	525128
957	22.6	0.0	0.0	chr10	101453825	101454014	(32343408)	C	MER58A	DNA/hAT-Charlie	(1)	223	34	525134
18	15.3	0.0	2.6	chr10	101570224	101570262	(32227160)	+	(TCCAC)n	Simple_repeat	1	39	(0)	525306
13	10.6	0.0	8.3	chr10	101570298	101570333	(32227089)	+	(CCCCA)n	Simple_repeat	1	36	(0)	525307
34	0.0	0.0	0.0	chr10	101830682	101830710	(31966712)	+	(CA)n	Simple_repeat	1	29	(0)	525757
12	10.8	6.7	0.0	chr10	101830872	101830901	(31966521)	+	(GCACAT)n	Simple_repeat	1	32	(0)	525758
2323	11.6	0.0	0.0	chr10	102054714	102055023	(31742399)	+	AluSq2	SINE/Alu	1	310	(3)	526185
1521	14.7	11.8	2.3	chr10	102136465	102136770	(31660652)	+	MER44A	DNA/TcMar-Tigger	1	339	(0)	526370
20	6.7	0.0	3.0	chr10	102714290	102714322	(31083100)	+	(CCT)n	Simple_repeat	1	33	(0)	527438
1669	17.6	0.3	3.9	chr10	102935606	102935917	(30861505)	C	AluJr	SINE/Alu	(11)	301	1	527890
21	13.4	0.0	0.0	chr10	102935986	102936018	(30861404)	+	(T)n	Simple_repeat	1	33	(0)	527891
453	26.6	7.2	1.9	chr10	103542675	103542831	(30254591)	+	MIRb	SINE/MIR	76	241	(27)	529172
347	35.1	6.0	1.7	chr10	103802023	103802196	(29995226)	C	MER5A	DNA/hAT-Charlie	(0)	189	8	529670
217	26.2	2.4	7.0	chr10	103802228	103802313	(29995109)	+	L2b	LINE/L2	3289	3370	(5)	529671
13	21.2	9.8	3.0	chr10	104231968	104232059	(29565363)	+	G-rich	Low_complexity	1	101	(0)	530386
1977	17.5	0.0	0.0	chr10	104284082	104284373	(29513049)	+	AluJb	SINE/Alu	5	296	(16)	530469
218	24.4	0.0	0.0	chr10	104329487	104329531	(29467891)	+	L2c	LINE/L2	3330	3374	(1)	530535
312	27.0	0.0	0.0	chr10	104329701	104329763	(29467659)	+	MIR	SINE/MIR	17	79	(183)	530537
18	4.7	0.0	0.0	chr10	109957980	109958001	(23839421)	+	(CA)n	Simple_repeat	1	22	(0)	538673
272	25.8	6.5	4.7	chr10	109997020	109997125	(23800297)	C	MLT1N2	LTR/ERVL-MaLR	(21)	541	434	538751
15	9.8	0.0	0.0	chr10	110008850	110008871	(23788551)	+	(AC)n	Simple_repeat	1	22	(0)	538776
585	21.8	5.5	0.6	chr10	110163341	110163497	(23633925)	+	MER103C	DNA/hAT-Charlie	88	252	(45)	539007
302	27.8	1.0	3.0	chr10	110163459	110163558	(23633864)	C	MER103C	DNA/hAT-Charlie	(198)	99	2	539008
764	24.6	8.9	0.0	chr10	110163682	110163917	(23633505)	+	MER112	DNA/hAT-Charlie	3	261	(0)	539009
465	20.1	3.9	2.8	chr10	110497263	110497403	(23300019)	C	L1MC5	LINE/L1	(14)	9290	9163	539646
388	24.1	5.1	1.8	chr10	110546583	110546696	(23250726)	+	L2b	LINE/L2	3258	3375	(0)	539746
17	29.2	1.9	0.0	chr10	110620397	110620450	(23176972)	+	(CA)n	Simple_repeat	1	55	(0)	539872
727	25.7	3.0	2.6	chr10	110620466	110620704	(23176718)	C	MIRb	SINE/MIR	(6)	262	21	539873
240	29.5	1.3	1.3	chr10	110916520	110916598	(22880824)	C	AmnSINE1	SINE/5S-Deu-L2	(181)	394	316	540368
16	25.6	3.4	1.6	chr10	112951983	112952041	(20845381)	+	(CTCT)n	Simple_repeat	1	61	(0)	543552
242	30.2	9.2	4.0	chr10	112984684	112984812	(20812610)	+	MIR3	SINE/MIR	2	148	(82)	543605
413	25.1	19.7	2.6	chr10	112984902	112985093	(20812329)	+	MIRb	SINE/MIR	2	234	(34)	543606
2065	12.9	0.7	0.0	chr10	113014906	113015191	(20782231)	+	AluSx1	SINE/Alu	1	288	(24)	543653
219	27.7	10.8	2.4	chr10	113015260	113015344	(20782078)	+	MIR1_Amn	SINE/MIR	138	230	(0)	543654
262	30.2	3.1	0.0	chr10	113015283	113015345	(20782077)	+	AmnSINE1	SINE/5S-Deu-L2	508	572	(3)	543655
1727	9.7	1.3	12.7	chr10	113015447	113015785	(20781637)	C	AluJo	SINE/Alu	(9)	303	4	543656
34	6.8	0.0	0.0	chr10	116273635	116273646	(17523776)	+	(CA)n	Simple_repeat	1	12	(0)	548528
52	2.1	0.0	0.0	chr10	116273647	116273695	(17523727)	+	(CT)n	Simple_repeat	1	49	(0)	548529
34	6.8	0.0	0.0	chr10	116273696	116273729	(17523693)	+	(CA)n	Simple_repeat	1	34	(0)	548530
997	20.9	1.4	0.0	chr10	116984216	116984421	(16813001)	C	MER3	DNA/hAT-Charlie	(0)	209	1	549666
12	24.2	3.5	3.4	chr10	118046682	118046695	(15750727)	+	(CTCCCT)n	Simple_repeat	1	57	(0)	551476
17	11.8	2.4	4.8	chr10	118046696	118046736	(15750686)	+	(CCT)n	Simple_repeat	1	42	(0)	551477
359	29.4	13.9	0.6	chr10	119178325	119178492	(14618930)	C	MIRb	SINE/MIR	(20)	248	55	553394
2336	14.1	0.0	0.3	chr10	121324556	121324890	(12472532)	C	MER1B	DNA/hAT-Charlie	(5)	334	1	556971
2933	19.9	4.5	4.3	chr10	121324899	121325469	(12471953)	+	L1MC3	LINE/L1	7109	7677	(108)	556972
22	3.9	0.0	0.0	chr10	121525621	121525647	(12271775)	+	(GA)n	Simple_repeat	1	27	(0)	557286
944	7.6	0.0	13.7	chr10	121819410	121819434	(11977988)	+	L1PB1	LINE/L1	6007	6031	(120)	557751
2126	6.0	2.9	1.1	chr10	121819435	121819701	(11977721)	+	AluYh3a3	SINE/Alu	13	284	(8)	557752
212	30.1	11.5	3.3	chr10	124087888	124088018	(9709404)	C	MIR3	SINE/MIR	(25)	183	40	561338
323	22.4	1.5	0.0	chr10	124088100	124088166	(9709256)	C	MIRb	SINE/MIR	(7)	261	194	561339
273	21.1	11.6	2.6	chr10	124088109	124088186	(9709236)	C	L2b	LINE/L2	(20)	3355	3270	561340
17	13.8	5.0	0.0	chr10	124791785	124791824	(9005598)	+	(ACCGCC)n	Simple_repeat	1	42	(0)	562470
1629	16.2	6.3	0.0	chr10	124823936	124824201	(8973221)	C	AluJr4	SINE/Alu	(28)	284	1	562538
2056	12.5	2.6	0.7	chr10	124824255	124824558	(8972864)	+	AluSz	SINE/Alu	2	311	(1)	562539
1705	17.7	2.7	2.0	chr10	124959461	124959759	(8837663)	C	AluJb	SINE/Alu	(11)	301	1	562852
192	36.4	10.9	1.2	chr10	124959760	124960043	(8837379)	C	L2c	LINE/L2	(565)	2854	2535	562851
911	20.5	10.1	1.6	chr10	125626031	125626283	(8171139)	+	LTR16A	LTR/ERVL	175	451	(0)	563800
183	28.6	0.0	0.0	chr10	125626411	125626459	(8170963)	C	MIRc	SINE/MIR	(24)	244	196	563801
237	32.6	13.3	0.0	chr10	125626494	125626708	(8170714)	C	L2c	LINE/L2	(6)	3381	3134	563802
377	23.9	6.6	1.3	chr10	125768212	125768349	(8029073)	C	MIR1_Amn	SINE/MIR	(39)	169	30	563979
2198	11.7	0.0	0.0	chr10	127990152	127990441	(5806981)	+	AluSz	SINE/Alu	23	312	(0)	566895
23638	8.5	0.7	2.4	chr10	130090117	130093730	(3703692)	+	L1PA7	LINE/L1	5	3618	(2843)	569088
252	26.2	16.1	2.7	chr10	132330162	132330349	(1467073)	+	L1MEi	LINE/L1	1647	1864	(348)	571537
100	38.0	3.6	4.8	chr10	133177142	133178224	(619198)	+	(TG)n	Simple_repeat	1	1122	(0)	572230
1862	22.8	7.2	1.1	chr10	133438610	133438816	(358606)	C	L1ME3F	LINE/L1	(3349)	2970	2745	572521
1613	26.8	10.6	2.2	chr11	469593	470578	(134616044)	+	L1MC3	LINE/L1	6558	7751	(131)	573426
239	29.5	5.4	3.3	chr11	831389	831479	(134255143)	C	L3b	LINE/CR1	(199)	5033	4941	573999
14	5.0	0.0	0.0	chr11	831640	831660	(134254962)	+	(CTG)n	Simple_repeat	1	21	(0)	574000
390	25.1	15.6	1.6	chr11	838654	838835	(134247787)	+	L2a	LINE/L2	3214	3425	(1)	574007
238	28.4	12.0	0.0	chr11	3092056	3092150	(131994472)	+	MIRc	SINE/MIR	47	154	(114)	576571
1853	16.0	1.6	4.4	chr11	9702402	9702719	(125383903)	C	AluJb	SINE/Alu	(2)	310	2	586387
15	31.9	2.1	7.0	chr11	10931608	10931747	(124154875)	+	G-rich	Low_complexity	1	143	(0)	588402
72	23.1	4.3	3.0	chr11	10932049	10932305	(124154317)	+	GA-rich	Low_complexity	1	268	(0)	588403
362	27.4	8.8	3.9	chr11	17014903	17015031	(118071591)	+	MIRb	SINE/MIR	123	258	(10)	597890
215	40.5	0.0	0.0	chr11	20013630	20013718	(115072904)	+	MIRb	SINE/MIR	165	253	(15)	603216
1130	28.2	3.0	0.7	chr11	26715363	26715655	(108370967)	+	LTR16C	LTR/ERVL	190	489	(0)	612861
784	23.6	7.2	6.8	chr11	27909444	27909679	(107176943)	+	MIR	SINE/MIR	13	249	(13)	614756
17	0.0	0.0	0.0	chr11	30488860	30488878	(104597744)	+	(AC)n	Simple_repeat	1	19	(0)	618544
844	27.0	14.0	7.0	chr11	34067937	34068482	(101018140)	C	MLT1G3	LTR/ERVL-MaLR	(0)	595	5	624628
14	14.6	0.0	3.1	chr11	34357915	34357946	(100728676)	+	(GGC)n	Simple_repeat	1	32	(0)	625127
13	20.1	0.0	7.5	chr11	34357947	34357967	(100728655)	+	(GGAGGC)n	Simple_repeat	1	53	(0)	625128
23	26.6	3.5	1.1	chr11	34358179	34358265	(100728357)	+	G-rich	Low_complexity	1	90	(0)	625129
204	27.6	10.3	3.3	chr11	43312711	43312800	(91773822)	C	L2c	LINE/L2	(18)	3369	3273	638277
2558	8.1	0.0	0.0	chr11	43312827	43313121	(91773501)	+	AluSg	SINE/Alu	1	295	(15)	638278
37	20.0	3.5	0.0	chr11	43934060	43934145	(91152477)	+	(CT)n	Simple_repeat	1	89	(0)	639220
320	35.4	3.0	1.2	chr11	44958214	44958376	(90128246)	+	MIRb	SINE/MIR	68	233	(35)	641190
606	33.0	0.9	4.3	chr11	44958322	44958590	(90128032)	C	MIR	SINE/MIR	(1)	261	9	641191
2525	4.9	1.3	1.3	chr11	46578602	46578908	(88507714)	+	AluY	SINE/Alu	1	307	(4)	644212
19	14.2	0.0	0.0	chr11	46579035	46579065	(88507557)	+	(A)n	Simple_repeat	1	31	(0)	644213
2370	8.1	0.3	0.0	chr11	46579176	46579471	(88507151)	+	AluSp	SINE/Alu	1	297	(16)	644214
227	11.6	10.4	0.0	chr11	46948677	46948719	(88137903)	+	UCON4	Unknown	73	120	(183)	644969
190	33.5	7.8	6.4	chr11	47204315	47204502	(87882120)	C	MamRTE1	LINE/RTE-BovB	(1214)	2598	2408	645440
1207	11.7	0.0	3.3	chr11	47539371	47539550	(87547072)	+	AluSx	SINE/Alu	2	175	(137)	646112
206	23.1	0.0	0.0	chr11	48013465	48013503	(87073119)	+	L2b	LINE/L2	3327	3365	(10)	647367
238	24.7	10.5	6.1	chr11	48024826	48024907	(87061715)	+	L2b	LINE/L2	3269	3354	(21)	647392
347	24.7	1.2	0.0	chr11	48024935	48025015	(87061607)	+	UCON105	Unknown	143	224	(49)	647393
2407	8.4	0.0	0.0	chr11	59548590	59548888	(75537734)	C	AluSc	SINE/Alu	(10)	299	1	656940
268	22.3	8.8	0.0	chr11	59548930	59549032	(75537590)	+	L1MC4a	LINE/L1	5315	5427	(2455)	656941
681	0.0	0.0	0.0	chr11	59550629	59550701	(75535921)	C	tRNA-Val-GTA	tRNA	(3)	73	1	656945
347	25.7	3.5	8.5	chr11	60753085	60753283	(74333339)	+	L2c	LINE/L2	3214	3383	(4)	658799
938	27.7	10.0	0.3	chr11	60753296	60753592	(74333030)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	83	658800
1365	9.9	0.0	6.1	chr11	62841342	62841418	(72245204)	+	AluSc8	SINE/Alu	131	199	(112)	662920
1657	2.7	0.0	0.0	chr11	62841624	62841809	(72244813)	C	U2	snRNA	(2)	186	1	662922
13	17.4	4.9	2.3	chr11	62881265	62881305	(72205317)	+	(GCTCG)n	Simple_repeat	1	43	(0)	663030
206	33.6	12.8	4.1	chr11	63942072	63942192	(71144430)	C	L2c	LINE/L2	(4)	3383	3239	664699
352	24.8	11.4	1.5	chr11	63942160	63942332	(71144290)	+	MIRb	SINE/MIR	19	221	(47)	664700
13	18.0	0.0	2.9	chr11	64743661	64743694	(70342928)	+	(CCCTGG)n	Simple_repeat	1	34	(0)	666147
18	25.2	4.8	2.3	chr11	64778514	64778620	(70308002)	+	(GCGGCGG)n	Simple_repeat	1	109	(0)	666183
15	19.1	1.9	5.6	chr11	64778569	64778621	(70308001)	+	G-rich	Low_complexity	1	54	(0)	666184
1491	17.7	1.3	10.5	chr11	64795700	64795830	(70290792)	C	AluJr	SINE/Alu	(179)	133	1	666224
267	29.0	5.4	2.7	chr11	64795905	64796015	(70290607)	+	L2b	LINE/L2	3263	3378	(9)	666222
398	35.3	6.0	1.4	chr11	64796050	64796256	(70290366)	C	MIRc	SINE/MIR	(34)	234	18	666227
513	28.2	14.3	0.6	chr11	65382621	65383056	(69703566)	+	L2b	LINE/L2	2847	3374	(1)	667450
182	31.5	1.1	13.2	chr11	65524698	65524803	(69561819)	C	MIRb	SINE/MIR	(76)	192	100	667713
67	24.2	1.5	5.7	chr11	65524835	65525093	(69561529)	+	(CCGCC)n	Simple_repeat	1	263	(0)	667714
785	25.9	15.7	1.0	chr11	66372953	66373358	(68713264)	+	MER113	DNA/hAT-Charlie	45	521	(0)	669347
320	27.6	5.9	0.8	chr11	66373373	66373500	(68713122)	C	L2c	LINE/L2	(296)	3091	2957	669348
555	26.7	12.3	2.9	chr11	66373610	66373887	(68712735)	C	MER20B	DNA/hAT-Charlie	(37)	746	439	669349
758	20.6	7.3	1.6	chr11	66675712	66675903	(68410719)	+	MER3	DNA/hAT-Charlie	1	204	(5)	670037
1549	18.3	8.5	0.9	chr11	66890036	66890372	(68196250)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	670426
431	29.9	0.9	0.0	chr11	67417009	67417115	(67669507)	C	L2a	LINE/L2	(5)	3421	3314	671608
34	0.0	0.0	0.0	chr11	68144884	68144912	(66941710)	+	(AC)n	Simple_repeat	1	29	(0)	672868
314	35.4	6.2	6.2	chr11	68144913	68144965	(66941657)	+	L2b	LINE/L2	3179	3228	(147)	672867
54	4.2	5.4	0.0	chr11	68144966	68145039	(66941583)	+	(GT)n	Simple_repeat	1	78	(0)	672869
314	35.4	6.2	6.2	chr11	68145040	68145174	(66941448)	+	L2b	LINE/L2	3229	3375	(0)	672867
196	36.5	7.7	0.0	chr11	68904164	68904319	(66182303)	C	L3	LINE/CR1	(98)	4001	3833	674192
374	26.9	17.7	0.3	chr11	69671530	69671716	(65414906)	C	MIR	SINE/MIR	(0)	262	42	675463
254	26.4	0.0	1.4	chr11	70091291	70091363	(64995259)	+	Charlie4z	DNA/hAT-Charlie	59	130	(37)	676254
466	33.5	3.3	3.3	chr11	70204146	70204367	(64882255)	C	MIR	SINE/MIR	(33)	235	2	676435
2467	6.4	0.0	0.3	chr11	72079260	72079554	(63007068)	+	AluSg7	SINE/Alu	1	294	(15)	679306
223	24.5	7.1	7.3	chr11	73333770	73333911	(61752711)	+	MIRc	SINE/MIR	34	175	(93)	681649
293	31.5	4.4	13.2	chr11	73333980	73334438	(61752184)	C	L2a	LINE/L2	(1)	3425	2970	681650
17	17.3	2.0	4.0	chr11	73376875	73376923	(61709699)	+	(GGCGC)n	Simple_repeat	1	50	(0)	681726
25	14.8	3.7	1.8	chr11	73377243	73377296	(61709326)	+	(GT)n	Simple_repeat	1	56	(0)	681727
2051	14.8	0.0	2.6	chr11	73531803	73532112	(61554510)	C	AluJb	SINE/Alu	(10)	302	1	682047
363	36.6	6.0	7.9	chr11	73532113	73532296	(61554326)	+	L2c	LINE/L2	3137	3311	(76)	682046
291	32.1	0.9	0.7	chr11	75554191	75554319	(59532303)	C	MIRc	SINE/MIR	(116)	152	23	686331
17	22.6	0.0	0.0	chr11	75554430	75554465	(59532157)	+	(CA)n	Simple_repeat	1	36	(0)	686332
2272	11.3	0.0	0.7	chr11	76310364	76310664	(58775958)	+	AluSz6	SINE/Alu	2	300	(12)	687750
415	28.9	4.3	8.8	chr11	76310665	76310741	(58775881)	+	MIRb	SINE/MIR	167	240	(28)	687749
589	32.7	4.8	0.0	chr11	76771704	76771920	(58314702)	+	MIR	SINE/MIR	25	252	(10)	688650
446	28.8	14.1	0.0	chr11	76772053	76772222	(58314400)	C	MIRb	SINE/MIR	(14)	254	57	688651
22343	8.7	0.7	0.9	chr11	82950370	82956849	(52129773)	C	L1PA6	LINE/L1	(0)	6469	1	699738
16	13.2	0.0	0.0	chr11	86245010	86245034	(48841588)	+	(CG)n	Simple_repeat	1	25	(0)	705223
42	0.0	0.0	0.0	chr11	86925296	86925331	(48161291)	+	(GT)n	Simple_repeat	1	36	(0)	706320
24	20.3	2.0	0.0	chr11	93197514	93197564	(41889058)	+	(CA)n	Simple_repeat	1	52	(0)	715243
16	17.0	0.0	0.0	chr11	93197794	93197826	(41888796)	+	(CGC)n	Simple_repeat	1	33	(0)	715244
338	41.2	2.6	0.7	chr11	94067032	94067180	(41019442)	C	L2b	LINE/L2	(20)	3355	3204	716636
189	34.2	4.8	5.7	chr11	94776261	94776471	(40310151)	+	L2	LINE/L2	2571	2779	(640)	717661
430	28.8	5.3	8.8	chr11	94787789	94788005	(40298617)	C	MLT1N2	LTR/ERVL-MaLR	(2)	560	352	717685
219	28.3	0.0	0.0	chr11	94788252	94788304	(40298318)	+	MIR3	SINE/MIR	145	197	(11)	717686
627	20.4	9.0	6.4	chr11	95435611	95435814	(39650808)	C	MER63A	DNA/hAT-Blackjack	(0)	210	1	718632
22053	9.1	3.6	2.6	chr11	96486836	96493112	(38593510)	+	L1PA6	LINE/L1	8	6467	(2)	720188
14	20.9	4.3	2.0	chr11	102110476	102110522	(32976100)	+	GA-rich	Low_complexity	1	49	(0)	727405
669	27.8	3.0	1.3	chr11	102836313	102836542	(32250080)	C	MIRb	SINE/MIR	(0)	268	35	728532
197	36.7	1.2	1.2	chr11	108595514	108595593	(26491029)	C	L2c	LINE/L2	(334)	3053	2974	737093
645	21.9	5.5	0.6	chr11	108595616	108595771	(26490851)	+	MER106B	DNA/hAT-Charlie	896	1059	(0)	737094
10804	17.6	6.0	1.5	chr11	108647375	108650248	(26436374)	+	L1M1	LINE/L1	16	3744	(3821)	737189
600	30.4	7.7	1.9	chr11	112885759	112886026	(22200596)	C	L2c	LINE/L2	(0)	3387	3103	743801
286	28.8	6.8	9.1	chr11	112886041	112886281	(22200341)	+	L2a	LINE/L2	3192	3426	(0)	743802
203	22.7	0.0	0.0	chr11	113305780	113305823	(21780799)	+	L2b	LINE/L2	3332	3375	(0)	744346
16	9.1	0.0	3.9	chr11	114162872	114162897	(20923725)	+	(TC)n	Simple_repeat	1	26	(0)	745822
17	11.4	2.4	4.7	chr11	115581041	115581082	(19505540)	+	(CCTCTC)n	Simple_repeat	1	43	(0)	747866
442	29.5	8.3	2.9	chr11	115581093	115581263	(19505359)	+	MIRc	SINE/MIR	88	268	(0)	747867
192	25.0	5.1	0.0	chr11	117832878	117832933	(17253689)	C	MIRb	SINE/MIR	(82)	186	128	751828
350	29.5	14.3	0.8	chr11	117833076	117833208	(17253414)	C	MIRc	SINE/MIR	(47)	221	68	751829
71	20.8	0.0	0.7	chr11	120347119	120347265	(14739357)	+	(CTTT)n	Simple_repeat	1	147	(0)	756404
43	0.0	0.0	0.0	chr11	120347271	120347307	(14739315)	+	(TG)n	Simple_repeat	1	37	(0)	756405
24	25.7	4.4	3.4	chr11	122882875	122882987	(12203635)	+	(GGC)n	Simple_repeat	1	118	(0)	760399
2120	15.7	2.5	5.3	chr11	124581966	124582421	(10504201)	+	MSTB2	LTR/ERVL-MaLR	15	457	(0)	763253
445	18.4	8.8	1.7	chr12	579406	579482	(132695827)	+	MER4CL34	LTR/ERV1	1	82	(683)	779003
45	0.0	2.0	2.0	chr12	579483	579531	(132695778)	+	(ACAAA)n	Simple_repeat	1	50	(0)	779004
445	18.4	8.8	1.7	chr12	579532	579569	(132695740)	+	MER4CL34	LTR/ERV1	83	124	(641)	779003
1471	19.4	2.8	2.0	chr12	579560	579915	(132695394)	+	MER4CL34	LTR/ERV1	421	872	(0)	779003
13	32.3	0.0	0.0	chr12	752200	752205	(132523104)	+	(TTC)n	Simple_repeat	1	9	(33)	779403
15	5.6	0.0	0.0	chr12	752206	752224	(132523085)	+	(T)n	Simple_repeat	1	19	(0)	779404
13	32.3	0.0	0.0	chr12	752225	752241	(132523068)	+	(TTC)n	Simple_repeat	10	42	(0)	779403
835	16.5	0.0	0.0	chr12	790272	790398	(132484911)	C	FLAM_C	SINE/Alu	(11)	132	6	779485
189	22.4	4.9	4.9	chr12	1559736	1559796	(131715513)	+	L2	LINE/L2	2321	2381	(1038)	780867
191	32.1	1.8	0.0	chr12	1559920	1559975	(131715334)	C	L2b	LINE/L2	(6)	3369	3313	780868
1229	19.5	4.1	0.8	chr12	1560065	1560323	(131714986)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	200	780869
224	23.2	1.6	0.9	chr12	1604758	1605303	(131670006)	+	(GT)n	Simple_repeat	1	555	(0)	780942
37	14.4	2.6	1.2	chr12	1661850	1661927	(131613382)	+	G-rich	Low_complexity	1	80	(0)	781039
1166	21.5	7.7	3.1	chr12	1739408	1739728	(131535581)	+	MER58B	DNA/hAT-Charlie	4	340	(1)	781193
2365	9.8	0.0	0.3	chr12	1739820	1740116	(131535193)	+	AluSq2	SINE/Alu	2	297	(16)	781194
31	0.0	0.0	0.0	chr12	1924796	1924829	(131350480)	+	(GT)n	Simple_repeat	1	34	(0)	781437
50	2.2	0.0	0.0	chr12	1924830	1924876	(131350433)	+	(GA)n	Simple_repeat	1	47	(0)	781438
21	26.1	2.5	2.4	chr12	2795036	2795116	(130480193)	+	(CCGCGC)n	Simple_repeat	1	83	(0)	782670
1564	10.6	17.5	0.0	chr12	2813042	2813286	(130462023)	C	AluSx1	SINE/Alu	(15)	297	1	782699
16	9.0	2.6	5.0	chr12	3077161	3077199	(130198110)	+	(CCCGTGC)n	Simple_repeat	1	40	(0)	783268
12	20.6	0.0	6.7	chr12	3077200	3077205	(130198104)	+	(CCCGTCC)n	Simple_repeat	1	45	(0)	783269
42	21.9	1.6	3.2	chr12	3077254	3077376	(130197933)	+	(CGCCC)n	Simple_repeat	1	125	(0)	783270
591	31.5	15.7	6.7	chr12	3581194	3581584	(129693725)	+	L3	LINE/CR1	3649	4081	(18)	784056
1732	23.2	7.0	2.8	chr12	6735672	6736292	(126539017)	+	L1MD2	LINE/L1	670	1323	(5317)	789290
36	23.2	2.8	0.9	chr12	6937959	6938065	(126337244)	+	(GCGAGC)n	Simple_repeat	1	110	(0)	789668
2408	8.4	0.0	0.6	chr12	6971265	6971575	(126303734)	C	AluSz	SINE/Alu	(3)	309	1	789707
2166	13.4	0.3	0.0	chr12	8399394	8399700	(124875609)	+	AluSc	SINE/Alu	1	308	(1)	792234
13	20.0	0.0	2.8	chr12	12611924	12611959	(120663350)	+	GA-rich	Low_complexity	1	36	(0)	798443
269	33.9	7.5	7.1	chr12	12901543	12901825	(120373484)	C	L2b	LINE/L2	(2)	3385	3106	799032
31	3.0	0.0	0.0	chr12	13000447	13000480	(120274829)	+	(GCAGCAGT)n	Simple_repeat	1	34	(0)	799227
227	36.2	11.7	2.6	chr12	19528840	19529103	(113746206)	C	L2c	LINE/L2	(24)	3363	3073	808376
180	25.0	3.6	4.8	chr12	19529176	19529259	(113746050)	C	L2c	LINE/L2	(460)	2959	2877	808376
333	28.7	3.5	13.9	chr12	26109328	26109485	(107165824)	C	L2a	LINE/L2	(4)	3422	3243	817522
12	8.9	4.2	0.0	chr12	26833030	26833053	(106442256)	+	(GCC)n	Simple_repeat	1	25	(0)	818545
15	8.9	7.9	2.4	chr12	26833099	26833136	(106442173)	+	(CTC)n	Simple_repeat	1	41	(0)	818546
372	24.9	2.2	1.5	chr12	27003816	27003922	(106271387)	+	MIRc	SINE/MIR	40	152	(78)	818827
2591	7.4	0.0	0.6	chr12	29711724	29712035	(103563274)	+	AluY	SINE/Alu	1	310	(1)	822745
431	34.2	3.9	0.0	chr12	31234746	31234894	(102040415)	+	MIRb	SINE/MIR	20	174	(94)	824860
328	29.6	0.0	5.3	chr12	31729530	31729661	(101545648)	C	MIRb	SINE/MIR	(16)	252	128	825912
1815	22.1	10.0	4.2	chr12	31749069	31749596	(101525713)	C	LTR8B	LTR/ERV1	(0)	820	259	825964
328	24.4	14.0	0.0	chr12	31749593	31749678	(101525631)	C	PrimLTR79	LTR/ERV1	(202)	301	202	825965
660	24.0	3.9	1.2	chr12	31959044	31959216	(101316093)	+	MER5A	DNA/hAT-Charlie	12	189	(0)	826461
12	20.9	0.0	4.8	chr12	31959362	31959403	(101315906)	+	(CTGGTC)n	Simple_repeat	1	42	(0)	826462
17	16.4	0.0	4.4	chr12	31959530	31959574	(101315735)	+	G-rich	Low_complexity	1	45	(0)	826463
270	29.3	5.7	4.7	chr12	32756019	32756184	(100519125)	+	MIR	SINE/MIR	58	229	(39)	828066
351	25.3	6.5	6.7	chr12	43841706	43841879	(89433430)	+	MIR	SINE/MIR	26	195	(35)	838647
276	23.0	3.9	3.9	chr12	45253697	45253773	(88021536)	+	MIR3	SINE/MIR	123	199	(9)	840565
2390	8.4	0.0	0.0	chr12	45253891	45254174	(88021135)	+	AluSc	SINE/Alu	5	288	(21)	840566
13	0.0	5.0	0.0	chr12	45727547	45727566	(87547743)	+	(GGC)n	Simple_repeat	1	21	(0)	841277
185	37.9	0.0	0.0	chr12	47088180	47088237	(86187072)	+	L2b	LINE/L2	3309	3366	(9)	843097
403	29.3	2.5	6.0	chr12	47753067	47753233	(85522076)	C	MIRc	SINE/MIR	(13)	255	95	844141
869	28.0	15.9	2.5	chr12	47768277	47768548	(85506761)	C	L2b	LINE/L2	(607)	2812	2520	844164
90	2.3	0.0	0.0	chr12	49264788	49264876	(84010433)	+	(CCCTTCCTC)n	Simple_repeat	1	89	(0)	846829
2230	8.0	0.4	0.0	chr12	49905271	49905544	(83369765)	C	AluSz	SINE/Alu	(37)	275	1	848013
335	26.3	10.1	3.7	chr12	49905756	49905956	(83369353)	+	L2c	LINE/L2	3071	3297	(90)	848014
20	16.8	0.0	0.0	chr12	50057223	50057257	(83218052)	+	(GT)n	Simple_repeat	1	35	(0)	848345
20	22.6	2.1	0.0	chr12	50057355	50057401	(83217908)	+	(CA)n	Simple_repeat	1	48	(0)	848346
2233	10.2	1.0	0.0	chr12	50197074	50197368	(83077941)	C	AluSx1	SINE/Alu	(13)	299	2	848635
282	33.0	1.1	0.0	chr12	50725220	50725307	(82550002)	+	MIRc	SINE/MIR	9	97	(171)	849874
434	30.9	4.5	1.8	chr12	51064812	51064982	(82210327)	+	MIR3	SINE/MIR	8	183	(25)	850522
1105	7.6	0.0	0.0	chr12	51308837	51308968	(81966341)	+	AluSz	SINE/Alu	1	132	(180)	851085
352	30.5	8.6	5.4	chr12	52175909	52176223	(81099086)	+	MamGypsy2-I	LTR/Gypsy	486	811	(3355)	852569
15	13.7	0.0	0.0	chr12	52981467	52981490	(80293819)	+	(T)n	Simple_repeat	1	24	(0)	853828
667	11.2	0.0	0.0	chr12	52981492	52981580	(80293729)	C	AluSg4	SINE/Alu	(221)	89	1	853829
23	7.8	2.2	4.3	chr12	53097732	53097776	(80177533)	+	(GCT)n	Simple_repeat	1	46	(0)	854054
18	24.0	3.5	4.5	chr12	53452258	53452342	(79822967)	+	(CCGC)n	Simple_repeat	1	88	(0)	854798
23	3.6	0.0	3.2	chr12	53979633	53979655	(79295654)	+	(CT)n	Simple_repeat	1	23	(0)	855728
54	0.0	0.0	0.0	chr12	53979656	53979701	(79295608)	+	(CA)n	Simple_repeat	1	46	(0)	855729
13	14.4	2.3	6.7	chr12	53979702	53979723	(79295586)	+	(CTCTCC)n	Simple_repeat	4	24	(0)	855730
13	4.5	4.3	0.0	chr12	53979798	53979820	(79295489)	+	(CCTG)n	Simple_repeat	1	24	(0)	855731
21	25.6	1.4	1.4	chr12	54018107	54018177	(79257132)	+	G-rich	Low_complexity	1	72	(0)	855761
17	22.0	2.3	0.0	chr12	54032808	54032851	(79242458)	+	(TCCC)n	Simple_repeat	1	45	(0)	855768
221	33.5	2.2	0.8	chr12	54090239	54090337	(79184972)	C	MIR1_Amn	SINE/MIR	(81)	149	44	855850
2631	5.5	0.0	0.6	chr12	55829165	55829476	(77445833)	+	AluSx4	SINE/Alu	1	310	(0)	858321
19	27.9	2.5	2.4	chr12	56080060	56080082	(77195227)	+	(CTCC)n	Simple_repeat	1	32	(50)	858883
18	8.7	0.0	0.0	chr12	56080083	56080107	(77195202)	+	(CT)n	Simple_repeat	1	25	(0)	858884
19	27.9	2.5	2.4	chr12	56080108	56080141	(77195168)	+	(CTCC)n	Simple_repeat	33	82	(0)	858883
1949	15.4	0.0	0.7	chr12	56219733	56220018	(77055291)	+	AluJb	SINE/Alu	1	284	(28)	859113
45	0.0	0.0	0.0	chr12	56220019	56220059	(77055250)	+	(AAAT)n	Simple_repeat	1	41	(0)	859114
1924	10.4	1.0	13.3	chr12	56220124	56220232	(77055077)	+	AluSx1	SINE/Alu	1	75	(237)	859115
2116	10.9	0.0	1.1	chr12	56220233	56220515	(77054794)	C	AluSx3	SINE/Alu	(30)	281	2	859116
24	23.2	4.9	1.2	chr12	56258303	56258384	(77016925)	+	(CGG)n	Simple_repeat	1	86	(0)	859169
202	7.1	0.0	0.0	chr12	56317837	56317864	(76957445)	+	MIRc	SINE/MIR	216	243	(25)	859299
2071	14.8	0.0	0.0	chr12	56317899	56318195	(76957114)	+	AluJb	SINE/Alu	5	301	(11)	859300
40	30.4	1.2	3.6	chr12	56521846	56522008	(76753301)	+	(CCTC)n	Simple_repeat	1	165	(0)	859705
227	9.5	7.4	2.2	chr12	56896091	56896562	(76378747)	+	(CA)n	Simple_repeat	1	507	(0)	860438
37	0.0	0.0	0.0	chr12	57112147	57112178	(76163131)	+	(AC)n	Simple_repeat	1	32	(0)	860716
50	0.0	4.0	0.0	chr12	57112214	57112263	(76163046)	+	(CA)n	Simple_repeat	1	52	(0)	860717
35	16.9	0.0	0.0	chr12	57342451	57342519	(75932790)	+	(CACA)n	Simple_repeat	1	69	(0)	861068
12	11.7	10.8	0.0	chr12	57488401	57488437	(75786872)	+	(CTTCCCT)n	Simple_repeat	1	41	(0)	861403
899	19.0	0.0	0.6	chr12	58889404	58889572	(74385737)	C	MER5B	DNA/hAT-Charlie	(0)	178	11	863357
239	31.2	1.3	2.5	chr12	58889790	58889868	(74385441)	+	L3b	LINE/CR1	5154	5231	(1)	863358
13	19.2	0.0	0.0	chr12	62602759	62602788	(70672521)	+	(GGCGG)n	Simple_repeat	1	30	(0)	868191
16	22.4	4.2	0.0	chr12	63440099	63440146	(69835163)	+	(TATT)n	Simple_repeat	1	50	(0)	869407
804	31.8	1.9	2.6	chr12	65606635	65606902	(67668407)	+	MIRb	SINE/MIR	3	268	(0)	873035
389	31.5	2.9	9.1	chr12	65630588	65630807	(67644502)	+	L2c	LINE/L2	3182	3387	(0)	873077
19	3.9	0.0	0.0	chr12	65630826	65630852	(67644457)	+	(TGAA)n	Simple_repeat	1	27	(0)	873078
21	34.0	1.3	0.0	chr12	65823657	65823732	(67451577)	+	(TG)n	Simple_repeat	1	77	(0)	873411
67	0.0	1.6	0.0	chr12	65824709	65824769	(67450540)	+	(TC)n	Simple_repeat	1	62	(0)	873413
24	25.5	3.7	2.7	chr12	65824931	65824969	(67450340)	+	(CCTCCT)n	Simple_repeat	1	39	(0)	873414
27	3.4	0.0	0.0	chr12	65824970	65824999	(67450310)	+	(ACCTCC)n	Simple_repeat	1	30	(0)	873415
24	25.5	3.7	2.7	chr12	65825000	65825008	(67450301)	+	(CCTCCT)n	Simple_repeat	4	20	(52)	873416
13	23.3	0.0	0.0	chr12	65825009	65825043	(67450266)	+	(CCG)n	Simple_repeat	1	35	(0)	873417
24	25.5	3.7	2.7	chr12	65825044	65825067	(67450242)	+	(CCTCCT)n	Simple_repeat	21	72	(0)	873416
184	24.5	13.3	5.8	chr12	67426158	67426261	(65849048)	+	MIR3	SINE/MIR	1	113	(95)	875901
253	28.7	2.2	4.4	chr12	68400503	68400593	(64874716)	+	L2b	LINE/L2	3287	3375	(0)	877303
551	28.3	5.2	2.7	chr12	68400720	68400944	(64874365)	+	MIRb	SINE/MIR	36	266	(2)	877304
14	23.2	1.9	3.6	chr12	69359672	69359725	(63915584)	+	(GCGCGT)n	Simple_repeat	1	55	(0)	879126
230	28.3	0.0	1.6	chr12	69360526	69360586	(63914723)	+	MIRb	SINE/MIR	209	268	(0)	879127
431	32.1	3.6	3.0	chr12	70070415	70070578	(63204731)	C	MamGypsy2-LTR	LTR/Gypsy	(12)	171	7	880333
1148	20.5	2.3	0.8	chr12	70070585	70070844	(63204465)	C	MamGypsy2-I	LTR/Gypsy	(0)	4166	3903	880333
13	12.8	2.6	5.1	chr12	70242939	70242976	(63032333)	+	(GGAGTGA)n	Simple_repeat	1	39	(0)	880614
27	6.1	0.0	0.0	chr12	70242991	70243025	(63032284)	+	(AACACA)n	Simple_repeat	1	35	(0)	880615
3116	13.7	0.2	0.8	chr12	75891138	75891624	(57383685)	+	MER31A	LTR/ERV1	2	485	(0)	888253
144	27.8	1.8	2.8	chr12	76007236	76007723	(57267586)	+	(CA)n	Simple_repeat	1	497	(0)	888467
12	13.9	0.0	0.0	chr12	76084480	76084503	(57190806)	+	(TCCC)n	Simple_repeat	1	24	(0)	888580
934	16.7	2.3	1.7	chr12	76909418	76909591	(56365718)	+	AluSz6	SINE/Alu	137	311	(1)	890060
16	17.2	7.4	1.7	chr12	77065820	77065843	(56209466)	+	(CGG)n	Simple_repeat	1	57	(0)	890306
16	11.3	0.0	0.0	chr12	77065844	77065872	(56209437)	+	(GGCGC)n	Simple_repeat	1	29	(0)	890307
14	9.6	0.0	0.0	chr12	77065873	77065895	(56209414)	+	(GGA)n	Simple_repeat	1	23	(0)	890308
2181	13.8	0.0	2.2	chr12	79684329	79684647	(53590662)	+	AluSz	SINE/Alu	1	312	(0)	893875
305	22.9	6.7	1.2	chr12	82862242	82862325	(50412984)	C	UCON73	Unknown	(3)	102	14	898369
15	29.4	1.6	1.5	chr12	85280565	85280628	(47994681)	+	(GGAAGGT)n	Simple_repeat	1	65	(0)	901405
382	32.9	3.6	1.4	chr12	85407538	85407756	(47867553)	+	MER124	DNA?	154	377	(20)	901581
16	18.9	0.0	0.0	chr12	88554258	88554287	(44721022)	+	A-rich	Low_complexity	1	30	(0)	905653
333	22.0	6.3	4.1	chr12	89138033	89138155	(44137154)	+	MLT1J	LTR/ERVL-MaLR	435	560	(2)	906531
34	5.6	0.0	0.0	chr12	89356675	89356712	(43918597)	+	(TG)n	Simple_repeat	1	38	(0)	906886
429	23.3	2.8	4.7	chr12	89664575	89664729	(43610580)	C	MER5A	DNA/hAT-Charlie	(1)	188	17	907403
53	0.0	0.0	0.0	chr12	89964618	89964665	(43310644)	+	(ATTT)n	Simple_repeat	1	48	(0)	907843
2380	9.0	0.0	0.7	chr12	89964666	89964947	(43310362)	C	AluSc8	SINE/Alu	(29)	282	1	907844
455	26.4	5.8	9.7	chr12	93280348	93280615	(39994694)	+	MamTip1	DNA/hAT-Tip100	8	264	(3)	913090
697	24.8	7.5	10.6	chr12	93407447	93407766	(39867543)	C	MER102b	DNA/hAT-Charlie	(0)	341	33	913374
758	26.3	11.8	3.5	chr12	93784269	93784500	(39490809)	C	MIR	SINE/MIR	(0)	262	9	914117
1305	18.4	18.8	0.4	chr12	94235598	94235875	(39039434)	C	MER58B	DNA/hAT-Charlie	(0)	341	1	914904
1653	21.8	2.4	1.6	chr12	94236007	94236375	(39038934)	C	Tigger12	DNA/TcMar-Tigger	(6)	2469	2098	914905
12	19.3	8.5	0.0	chr12	94460065	94460111	(38815198)	+	(GCGGCA)n	Simple_repeat	1	51	(0)	915225
2074	10.7	0.7	4.5	chr12	96193585	96193893	(37081416)	C	AluSq2	SINE/Alu	(16)	297	1	918661
17	28.4	0.0	1.8	chr12	100573651	100573707	(32701602)	+	(GGC)n	Simple_repeat	1	57	(0)	925852
372	28.0	11.9	2.0	chr12	104516971	104517167	(28758142)	C	MIR	SINE/MIR	(3)	259	41	932742
22244	9.7	1.9	1.7	chr12	105007557	105013982	(28261327)	C	L1PA7	LINE/L1	(50)	6419	3	933652
2902	14.5	4.8	0.8	chr12	105013985	105014506	(28260803)	C	Tigger2b_Pri	DNA/TcMar-Tigger	(524)	544	1	933653
38	0.0	0.0	0.0	chr12	106075287	106075319	(27199990)	+	(AC)n	Simple_repeat	1	33	(0)	935560
497	27.9	0.0	1.3	chr12	106075436	106075591	(27199718)	+	MIR	SINE/MIR	99	252	(10)	935561
2499	24.0	9.3	8.7	chr12	107091328	107092108	(26183201)	+	L2a	LINE/L2	2570	3416	(10)	937392
557	31.9	8.1	4.8	chr12	108604218	108604612	(24670697)	C	L2a	LINE/L2	(5)	3421	3013	940648
193	29.1	14.1	0.0	chr12	108604732	108604810	(24670499)	+	MIR3	SINE/MIR	113	204	(4)	940649
1586	22.8	9.3	4.3	chr12	108604859	108605273	(24670036)	+	L1ME2	LINE/L1	5514	5953	(211)	940650
934	21.2	13.2	0.9	chr12	108635508	108635740	(24639569)	+	MER58B	DNA/hAT-Charlie	28	293	(48)	940721
606	21.6	16.7	2.4	chr12	108635756	108635962	(24639347)	C	MIRb	SINE/MIR	(11)	257	12	940722
1308	20.1	6.2	9.3	chr12	108640686	108640907	(24634402)	+	MLT2B4	LTR/ERVL	230	406	(8)	940729
262	29.3	14.1	0.7	chr12	108640921	108641061	(24634248)	C	L2a	LINE/L2	(703)	2716	2554	940727
1054	26.8	7.5	1.4	chr12	108684108	108684542	(24590767)	+	L1ME3Cz	LINE/L1	49	512	(485)	940792
370	28.5	4.8	0.1	chr12	109021336	109021483	(24253826)	C	L2b	LINE/L2	(3)	3423	3251	941563
16	17.1	0.0	0.0	chr12	109052622	109052654	(24222655)	+	(CGG)n	Simple_repeat	1	33	(0)	941640
19	16.5	0.0	2.3	chr12	109627047	109627089	(23648220)	+	(GGAT)n	Simple_repeat	1	43	(0)	942905
204	26.2	0.0	13.3	chr12	109627209	109627258	(23648051)	+	L2b	LINE/L2	3308	3354	(21)	942906
2289	10.4	2.9	0.0	chr12	109627259	109627556	(23647753)	C	AluSz	SINE/Alu	(5)	307	1	942907
513	27.0	2.3	0.0	chr12	109996637	109996762	(23278547)	C	L2a	LINE/L2	(0)	3426	3298	943775
2132	9.1	1.1	1.1	chr12	109996796	109996929	(23278380)	+	AluSz	SINE/Alu	1	135	(177)	943776
740	16.9	13.3	2.6	chr12	109998744	109998937	(23276372)	+	MER20	DNA/hAT-Charlie	2	219	(0)	943782
205	34.8	1.4	0.0	chr12	110048838	110048906	(23226403)	C	MIRb	SINE/MIR	(62)	206	137	943867
437	26.3	4.7	7.8	chr12	110048901	110049143	(23226166)	+	L2a	LINE/L2	3128	3362	(64)	943868
702	18.7	4.0	6.2	chr12	110123695	110123871	(23151438)	+	MamRep4096	DNA/hAT-Tip100	197	369	(57)	944093
25	10.6	0.0	0.0	chr12	110123955	110123995	(23151314)	+	(ATGA)n	Simple_repeat	1	41	(0)	944094
59	12.1	4.1	2.3	chr12	110124162	110124284	(23151025)	+	(GCCCC)n	Simple_repeat	1	128	(0)	944095
907	20.0	3.4	18.9	chr12	110552484	110552582	(22722727)	+	MER33	DNA/hAT-Charlie	3	100	(224)	944989
2462	7.9	0.0	0.0	chr12	110552583	110552887	(22722422)	+	AluY	SINE/Alu	1	305	(6)	944990
697	19.0	3.0	11.9	chr12	110600224	110600408	(22674901)	+	MER58A	DNA/hAT-Charlie	57	224	(0)	945096
533	21.9	0.8	2.5	chr12	110600409	110600524	(22674785)	C	LTR37B	LTR/ERV1	(352)	116	3	945092
324	20.0	13.8	3.9	chr12	110602202	110602305	(22673004)	+	L2b	LINE/L2	3255	3370	(5)	945101
951	12.9	0.8	0.0	chr12	110698168	110698299	(22577010)	C	AluJr	SINE/Alu	(179)	133	1	945314
232	28.0	6.9	10.8	chr12	110733952	110734280	(22541029)	+	L2b	LINE/L2	3081	3386	(1)	945381
305	15.0	5.9	5.9	chr12	110743442	110743526	(22531783)	+	L1ME3Cz	LINE/L1	885	969	(28)	945399
279	23.5	16.1	2.3	chr12	111407804	111408006	(21867303)	+	MIRb	SINE/MIR	8	237	(31)	947032
15	4.8	0.0	0.0	chr12	111408020	111408041	(21867268)	+	(GGT)n	Simple_repeat	1	22	(0)	947033
13	28.3	1.6	3.1	chr12	111766730	111766792	(21508517)	+	G-rich	Low_complexity	1	64	(0)	947852
253	21.2	15.8	0.0	chr12	115177685	115177769	(18097540)	+	MIR	SINE/MIR	158	258	(4)	955463
216	23.1	3.0	0.2	chr12	115177779	115178320	(18096989)	+	(CATCAC)n	Simple_repeat	1	558	(0)	955464
227	27.9	4.4	3.4	chr12	115999911	115999999	(17275310)	+	MIRc	SINE/MIR	66	155	(113)	957219
445	24.2	2.9	0.0	chr12	116278183	116278281	(16997028)	C	MIR	SINE/MIR	(116)	146	45	957625
238	19.7	4.6	1.4	chr12	116278338	116278411	(16996898)	C	MIRb	SINE/MIR	(9)	259	177	957626
26	0.0	0.0	0.0	chr12	116278431	116278455	(16996854)	+	(TCAT)n	Simple_repeat	1	25	(0)	957627
213	22.5	0.0	0.0	chr12	116278458	116278497	(16996812)	C	L2b	LINE/L2	(13)	3362	3323	957628
172	15.9	4.9	4.2	chr12	116737305	116737777	(16537532)	+	GA-rich	Low_complexity	1	496	(0)	958800
19	14.8	3.5	5.0	chr12	116737904	116737961	(16537348)	+	(GGCGCGG)n	Simple_repeat	1	60	(0)	958801
584	30.4	5.0	3.1	chr12	116882696	116882950	(16392359)	C	MIR	SINE/MIR	(1)	261	2	959187
389	25.0	8.2	3.9	chr12	116882951	116883056	(16392253)	+	MIRb	SINE/MIR	141	252	(16)	959188
263	28.8	4.1	2.5	chr12	116958650	116958770	(16316539)	C	L2c	LINE/L2	(178)	3209	3087	959343
548	29.8	2.2	3.2	chr12	116958776	116958962	(16316347)	C	MER117	DNA/hAT-Charlie	(12)	185	1	959344
232	34.2	18.8	1.0	chr12	120200478	120200669	(13074640)	+	MIRb	SINE/MIR	27	260	(8)	966429
2497	5.5	0.0	1.3	chr12	120201476	120201783	(13073526)	C	AluY	SINE/Alu	(7)	304	1	966430
1323	1.4	0.0	0.0	chr12	120291760	120291903	(12983406)	C	U4	snRNA	(1)	144	1	966631
2122	7.6	2.7	1.0	chr12	120292321	120292608	(12982701)	+	AluSg4	SINE/Alu	1	293	(17)	966632
236	17.7	9.0	4.1	chr12	120430689	120430762	(12844547)	C	L2a	LINE/L2	(15)	3372	3277	967056
2239	7.5	1.7	0.7	chr12	120430807	120431100	(12844209)	C	AluSc8	SINE/Alu	(14)	297	1	967057
2198	8.1	1.6	1.9	chr12	120997998	120998305	(12277004)	+	AluSz	SINE/Alu	1	307	(5)	968337
1056	21.8	6.2	4.4	chr12	120998306	120998554	(12276755)	C	MER46C	DNA/TcMar-Tigger	(83)	255	1	968336
1901	13.1	0.3	1.4	chr12	121210498	121210794	(12064515)	+	AluJr	SINE/Alu	1	294	(18)	968859
182	27.7	1.5	7.1	chr12	121351382	121351451	(11923858)	+	MIRb	SINE/MIR	197	262	(6)	969181
2366	8.9	0.0	0.0	chr12	121351464	121351756	(11923553)	C	AluSx3	SINE/Alu	(18)	293	1	969182
2064	12.2	3.9	1.3	chr12	121396658	121396961	(11878348)	C	AluJo	SINE/Alu	(0)	312	1	969314
27	0.0	0.0	0.0	chr12	121396967	121396992	(11878317)	+	(TGTTT)n	Simple_repeat	1	26	(0)	969315
2348	5.2	0.0	0.4	chr12	121396993	121397264	(11878045)	C	AluYc	SINE/Alu	(28)	271	1	969316
194	27.8	1.8	0.0	chr12	121415276	121415329	(11859980)	C	MIRb	SINE/MIR	(110)	158	104	969347
1853	15.7	2.4	0.0	chr12	121415339	121415625	(11859684)	+	AluSz	SINE/Alu	1	294	(18)	969348
573	22.4	1.0	6.8	chr12	121888204	121888402	(11386907)	C	MIR	SINE/MIR	(2)	228	42	970591
265	17.0	0.0	0.4	chr12	121888506	121888557	(11386752)	+	L2c	LINE/L2	3346	3424	(2)	970592
462	23.4	8.6	0.0	chr12	121990030	121990157	(11285152)	C	MER115	DNA/hAT-Tip100	(22)	671	532	970843
20	25.4	4.9	1.2	chr12	122021767	122021847	(11253462)	+	(GGC)n	Simple_repeat	1	85	(0)	970921
50	5.6	0.0	0.0	chr12	122021917	122021972	(11253337)	+	(TG)n	Simple_repeat	1	56	(0)	970922
15	29.9	0.0	6.1	chr12	122896049	122896130	(10379179)	+	(CCG)n	Simple_repeat	1	82	(0)	972885
301	26.6	11.4	3.8	chr12	123063727	123063887	(10211422)	+	MIRb	SINE/MIR	3	178	(52)	973243
423	22.8	3.1	1.6	chr12	123305064	123305188	(9970121)	+	L1ME2z	LINE/L1	6318	6444	(0)	973745
203	28.1	2.4	2.4	chr12	123305286	123305369	(9969940)	+	MIRc	SINE/MIR	160	243	(25)	973746
2248	8.8	1.4	0.3	chr12	123305478	123305772	(9969537)	C	AluSx1	SINE/Alu	(14)	298	1	973747
17	13.1	0.0	0.0	chr12	124518202	124518227	(8757082)	+	(A)n	Simple_repeat	1	26	(0)	976196
2384	9.7	0.3	1.0	chr12	124689244	124689554	(8585755)	+	AluSx	SINE/Alu	1	309	(3)	976586
642	25.6	15.1	3.2	chr12	124689556	124689961	(8585348)	C	MLT1K	LTR/ERVL-MaLR	(72)	523	1	976587
184	32.6	9.8	4.2	chr12	124816268	124816411	(8458898)	C	OldhAT1	DNA/hAT-Ac	(461)	2387	2235	976890
461	27.4	1.6	2.4	chr12	124816338	124816464	(8458845)	+	L2a	LINE/L2	3299	3424	(2)	976888
1753	19.4	4.7	8.3	chr12	124938490	124938971	(8336338)	+	LTR10E	LTR/ERV1	1	464	(169)	977197
15	28.5	1.3	5.0	chr12	124939020	124939098	(8336211)	+	A-rich	Low_complexity	1	80	(0)	977198
256	28.6	7.7	3.2	chr12	124939171	124939339	(8335970)	+	MIRb	SINE/MIR	78	256	(6)	977199
248	21.8	1.3	3.7	chr12	124940188	124940268	(8335041)	C	MER5A	DNA/hAT-Charlie	(63)	126	48	977202
331	29.4	17.5	6.5	chr12	124940369	124940722	(8334587)	C	L2a	LINE/L2	(18)	3357	2960	977203
585	13.5	5.1	0.4	chr12	125677856	125678999	(7596310)	+	(ATG)n	Simple_repeat	1	1202	(0)	978556
16	3.4	2.9	5.7	chr12	131929671	131929704	(1345605)	+	(GGGGTC)n	Simple_repeat	1	35	(0)	988830
299	30.5	9.2	5.6	chr12	132330346	132330470	(944839)	+	L2a	LINE/L2	3297	3426	(0)	989336
235	24.1	1.3	0.7	chr12	132422672	132423266	(852043)	+	(CTCT)n	Simple_repeat	1	603	(0)	989438
208	15.8	3.0	3.9	chr12	132597406	132597907	(677402)	+	(CTGTCT)n	Simple_repeat	1	517	(0)	989641
439	18.3	1.9	0.9	chr12	132762410	132762514	(512795)	+	AluJb	SINE/Alu	2	107	(205)	989910
291	7.7	0.0	0.0	chr12	132762515	132762553	(512756)	C	MADE1	DNA/TcMar-Mariner	(41)	39	1	989911
1211	28.2	6.3	10.1	chr13	20021275	20022191	(94342137)	C	L1MEc	LINE/L1	(5470)	930	62	993622
2223	10.9	0.0	4.1	chr13	20126309	20126628	(94237700)	C	AluSx1	SINE/Alu	(5)	307	1	993804
265	22.2	1.6	0.0	chr13	20126629	20126691	(94237637)	+	MER5A	DNA/hAT-Charlie	123	186	(3)	993805
16	15.3	2.0	6.0	chr13	20127770	20127818	(94236510)	+	(TGAGG)n	Simple_repeat	1	50	(0)	993808
386	26.4	5.1	0.8	chr13	20858352	20858481	(93505847)	+	L1MC4	LINE/L1	7817	7952	(90)	994962
309	21.1	0.0	0.0	chr13	20858512	20858563	(93505765)	+	7SLRNA	srpRNA	257	308	(12)	994964
2286	12.2	0.0	0.0	chr13	20858591	20858894	(93505434)	+	AluSx3	SINE/Alu	2	305	(6)	994965
715	21.8	6.1	8.2	chr13	25887020	25887289	(88477039)	+	L1ME3A	LINE/L1	5903	6166	(7)	1002433
280	28.1	21.2	4.9	chr13	27065401	27065666	(87298662)	+	L3	LINE/CR1	3393	3713	(386)	1004261
291	30.3	0.0	13.1	chr13	27065764	27065900	(87298428)	+	L3	LINE/CR1	3978	4096	(3)	1004261
25	22.6	3.5	2.2	chr13	33350651	33350736	(81013592)	+	(CCTCC)n	Simple_repeat	1	89	(0)	1014177
1521	26.8	7.2	6.5	chr13	35927590	35928289	(78436039)	+	MER21C	LTR/ERVL	14	812	(126)	1017825
22	17.2	1.9	1.8	chr13	36820324	36820377	(77543951)	+	(TCAGTTC)n	Simple_repeat	1	55	(0)	1019109
309	31.2	7.9	4.3	chr13	39035354	39035584	(75328744)	+	MIRb	SINE/MIR	29	268	(0)	1022079
599	27.0	15.0	2.2	chr13	42787247	42787477	(71576851)	C	MIRb	SINE/MIR	(0)	268	3	1027892
30	11.8	8.0	1.2	chr13	51222279	51222353	(63141975)	+	(GGCGCG)n	Simple_repeat	1	81	(0)	1041254
636	33.2	4.7	1.6	chr13	51541838	51542085	(62822243)	C	MIR	SINE/MIR	(2)	260	5	1041745
1574	18.8	4.8	10.1	chr13	54628429	54628954	(59735374)	+	LTR54B	LTR/ERV1	1	497	(1)	1046156
35	5.4	0.0	0.0	chr13	75480868	75480906	(38883422)	+	(CA)n	Simple_repeat	1	39	(0)	1073408
16	18.9	0.0	0.0	chr13	77027214	77027243	(37337085)	+	G-rich	Low_complexity	1	30	(0)	1075601
2259	10.5	1.7	0.0	chr13	93513877	93514172	(20850156)	C	AluSq2	SINE/Alu	(12)	301	1	1096983
285	34.4	3.2	0.0	chr13	99909653	99909774	(14454554)	C	MER117	DNA/hAT-Charlie	(0)	197	72	1107018
25	18.5	1.8	0.0	chr13	99970035	99970109	(14394219)	+	(GCG)n	Simple_repeat	1	76	(0)	1107124
41	2.4	0.0	0.0	chr13	99970408	99970449	(14393879)	+	(GGC)n	Simple_repeat	1	42	(0)	1107125
31	17.3	4.0	4.8	chr13	110561742	110561853	(3802475)	+	(CGCCCC)n	Simple_repeat	1	111	(0)	1121399
13	15.6	2.0	7.8	chr13	113296931	113296980	(1067348)	+	(CTTCCT)n	Simple_repeat	1	51	(0)	1124474
12	24.3	0.0	4.3	chr13	114234973	114235019	(129309)	+	G-rich	Low_complexity	1	47	(0)	1125385
183	19.1	0.0	14.6	chr14	20613590	20613644	(86430074)	C	OldhAT1	DNA/hAT-Ac	(1703)	1145	1099	1128343
624	2.7	0.0	0.0	chr14	20613790	20613862	(86429856)	C	tRNA-Thr-ACA	tRNA	(3)	73	1	1128344
576	25.5	1.3	6.3	chr14	22957344	22957410	(84086308)	C	MIRb	SINE/MIR	(9)	259	197	1132035
20678	11.4	3.9	2.3	chr14	29022833	29029502	(78014216)	C	L1PA5	LINE/L1	(0)	6154	8	1140008
24094	9.0	0.7	1.8	chr14	34139341	34142492	(72901226)	+	L1PA7	LINE/L1	2	3147	(3314)	1147301
12	7.2	10.3	0.0	chr14	35046379	35046407	(71997311)	+	(GGCGCG)n	Simple_repeat	1	32	(0)	1149236
363	30.0	6.9	9.5	chr14	35866880	35867089	(71176629)	+	L2b	LINE/L2	3171	3374	(13)	1150774
31	0.0	0.0	0.0	chr14	35867090	35867118	(71176600)	+	(TGAA)n	Simple_repeat	1	29	(0)	1150775
258	34.2	15.8	0.9	chr14	35867120	35867340	(71176378)	C	L2a	LINE/L2	(40)	3386	3127	1150776
1846	21.2	7.4	1.9	chr14	49173581	49174657	(57869061)	+	L1MA8	LINE/L1	1723	2682	(4883)	1167624
16	15.0	1.9	7.5	chr14	49634052	49634103	(57409615)	+	(CGG)n	Simple_repeat	1	53	(0)	1168309
988	13.8	3.2	0.6	chr14	50342458	50342639	(56701079)	+	MER53	DNA/hAT	1	187	(6)	1169806
984	23.4	13.7	2.0	chr14	51092781	51093237	(55950481)	C	L2a	LINE/L2	(126)	3300	2774	1170950
238	29.3	7.5	2.0	chr14	51241365	51241465	(55802253)	C	MIRb	SINE/MIR	(30)	238	132	1171169
283	21.9	2.7	0.0	chr14	51241601	51241672	(55802046)	+	FLAM_C	SINE/Alu	33	107	(26)	1171170
3034	24.7	2.1	2.8	chr14	51768290	51769281	(55274437)	C	L1MB3	LINE/L1	(359)	5824	4818	1171940
2063	14.0	0.3	0.3	chr14	51769324	51769631	(55274087)	+	AluSp	SINE/Alu	1	308	(5)	1171943
3274	24.2	6.8	5.7	chr14	54635862	54637082	(52406636)	C	L2a	LINE/L2	(0)	3426	2213	1176264
15	13.4	2.9	2.8	chr14	55051679	55051713	(51992005)	+	(GCT)n	Simple_repeat	1	36	(0)	1176946
27	14.2	6.5	0.0	chr14	60165237	60165298	(46878420)	+	(AGC)n	Simple_repeat	1	66	(0)	1184649
49	2.2	0.0	0.0	chr14	60650585	60650630	(46393088)	+	(GT)n	Simple_repeat	1	46	(0)	1185330
16	22.3	0.0	2.3	chr14	61321681	61321724	(45721994)	+	GA-rich	Low_complexity	1	44	(0)	1186349
652	32.0	8.8	4.1	chr14	61558066	61558276	(45485442)	+	L3	LINE/CR1	3792	4015	(84)	1186672
13	21.9	2.3	2.2	chr14	61695857	61695900	(45347818)	+	(GCCC)n	Simple_repeat	1	45	(0)	1186913
2141	14.7	8.3	3.4	chr14	63677942	63678159	(43365559)	C	LTR47A2	LTR/ERVL	(197)	235	1	1189782
883	20.3	11.2	2.6	chr14	65478588	65478912	(41564806)	+	MER57E1	LTR/ERV1	1	411	(0)	1193255
256	31.3	7.7	0.8	chr14	68137818	68137949	(38905769)	+	Eulor6D	DNA?	122	263	(39)	1197280
17	25.8	3.0	1.5	chr14	74946695	74946760	(32096958)	+	(TTCT)n	Simple_repeat	1	68	(0)	1209452
439	26.4	20.2	2.0	chr14	76352536	76352736	(30690982)	+	MIR	SINE/MIR	16	262	(0)	1212042
62	1.8	0.0	0.0	chr14	76458426	76458482	(30585236)	+	(AC)n	Simple_repeat	1	57	(0)	1212246
463	29.1	2.3	4.4	chr14	76905034	76905213	(30138505)	C	MIRb	SINE/MIR	(34)	234	59	1213171
467	32.1	6.3	3.7	chr14	76905234	76905429	(30138289)	+	L1ME4a	LINE/L1	5746	5948	(176)	1213172
12	22.2	6.4	0.0	chr14	76956643	76956689	(30087029)	+	(GCCGGCC)n	Simple_repeat	1	50	(0)	1213291
11	17.3	0.0	5.6	chr14	76957120	76957155	(30086563)	+	(CCCCCA)n	Simple_repeat	1	36	(0)	1213292
16	0.0	0.0	0.0	chr14	77033326	77033342	(30010376)	+	(A)n	Simple_repeat	1	17	(0)	1213476
12	13.7	6.2	0.0	chr14	79325097	79325128	(27718590)	+	(CTTTCT)n	Simple_repeat	1	34	(0)	1217603
230	27.3	0.0	0.0	chr14	89576659	89576713	(17467005)	+	UCON15	Unknown	89	143	(204)	1232331
16	21.6	4.2	0.0	chr14	89576748	89576795	(17466923)	+	(CCTC)n	Simple_repeat	1	50	(0)	1232332
14	7.2	6.9	0.0	chr14	90383484	90383512	(16660206)	+	(GCCCTC)n	Simple_repeat	1	31	(0)	1233809
405	32.4	12.3	4.1	chr14	91154702	91155282	(15888436)	+	L2c	LINE/L2	2730	3354	(33)	1235179
247	31.2	0.0	3.1	chr14	91155295	91155390	(15888328)	C	MIR	SINE/MIR	(10)	252	160	1235184
700	14.2	1.6	0.0	chr14	91155392	91155511	(15888207)	+	MER21B	LTR/ERVL	1	122	(746)	1235185
455	24.9	5.1	7.7	chr14	91284705	91284926	(15758792)	+	MER113	DNA/hAT-Charlie	305	520	(1)	1235463
2167	11.9	2.0	0.0	chr14	91346623	91346916	(15696802)	+	AluSx	SINE/Alu	1	300	(12)	1235553
633	21.3	3.7	5.2	chr14	92720192	92720384	(14323334)	C	MIRb	SINE/MIR	(16)	252	63	1238086
680	32.8	1.3	0.6	chr14	92906088	92906333	(14137385)	+	MIRb	SINE/MIR	1	252	(16)	1238484
242	29.5	30.7	0.0	chr14	92906506	92906619	(14137099)	C	MIR	SINE/MIR	(94)	168	20	1238485
21	17.8	0.0	0.0	chr14	94080696	94080733	(12962985)	+	A-rich	Low_complexity	1	38	(0)	1240580
272	29.9	0.9	4.5	chr14	95259874	95259985	(11783733)	+	L2b	LINE/L2	2994	3101	(274)	1242682
187	23.8	0.0	10.6	chr14	95260052	95260098	(11783620)	+	L2b	LINE/L2	3325	3366	(21)	1242682
14	0.0	0.0	4.5	chr14	95260100	95260121	(11783597)	+	(CATT)n	Simple_repeat	1	22	(0)	1242683
2496	6.1	0.0	0.3	chr14	95260161	95260457	(11783261)	+	AluYf1	SINE/Alu	2	297	(14)	1242684
1951	23.9	8.9	7.2	chr14	96360055	96360811	(10682907)	+	Charlie7	DNA/hAT-Charlie	1455	2240	(372)	1244734
697	19.6	0.7	2.2	chr14	96360812	96360949	(10682769)	+	FLAM_C	SINE/Alu	1	136	(7)	1244735
1951	23.9	8.9	7.2	chr14	96360950	96361026	(10682692)	+	Charlie7	DNA/hAT-Charlie	2241	2305	(307)	1244734
2244	11.7	1.6	0.0	chr14	96507871	96508170	(10535548)	C	AluSx	SINE/Alu	(7)	305	1	1245043
367	25.0	11.4	5.0	chr14	96575005	96575143	(10468575)	C	MIRb	SINE/MIR	(84)	184	36	1245138
225	31.8	12.5	2.4	chr14	99192644	99192837	(7850881)	+	MIRb	SINE/MIR	30	252	(16)	1249653
236	33.8	7.5	0.0	chr14	99195505	99195640	(7848078)	C	MIRb	SINE/MIR	(36)	232	86	1249657
17	14.5	2.5	2.4	chr14	99522476	99522515	(7521203)	+	(TGAA)n	Simple_repeat	1	41	(0)	1250148
315	33.1	13.0	1.1	chr14	99572693	99572875	(7470843)	+	L2a	LINE/L2	3216	3423	(3)	1250216
432	30.6	11.8	7.2	chr14	99821936	99822280	(7221438)	+	MamRTE1	LINE/RTE-BovB	3450	3812	(0)	1250693
427	29.8	11.8	2.6	chr14	100221769	100222210	(6821508)	C	L2c	LINE/L2	(97)	3290	2803	1251465
285	32.0	13.2	1.5	chr14	100476592	100476791	(6566927)	+	MIRb	SINE/MIR	28	254	(14)	1251926
218	28.1	11.1	1.0	chr14	102317598	102317694	(4726024)	C	L2a	LINE/L2	(4)	3422	3315	1254660
756	17.3	0.8	1.6	chr14	102524471	102524597	(4519121)	C	AluJr	SINE/Alu	(186)	126	1	1255086
483	18.2	6.7	3.1	chr14	102524748	102524877	(4518841)	+	MLT1M	LTR/ERVL-MaLR	121	255	(417)	1255087
738	8.7	0.0	0.0	chr14	102541147	102541238	(4502480)	C	AluSx	SINE/Alu	(200)	112	21	1255129
1403	13.4	0.0	1.5	chr14	102541240	102541441	(4502277)	C	AluJb	SINE/Alu	(29)	283	85	1255130
11	25.5	0.0	6.9	chr14	102592248	102592305	(4451413)	+	G-rich	Low_complexity	1	58	(0)	1255258
1059	16.9	5.0	17.8	chr14	102639263	102639482	(4404236)	C	AluJb	SINE/Alu	(10)	302	132	1255392
64	1.5	2.9	0.0	chr14	102639483	102639551	(4404167)	+	(ATTT)n	Simple_repeat	1	71	(0)	1255393
1865	15.4	1.1	0.0	chr14	102639552	102639830	(4403888)	C	AluSx1	SINE/Alu	(30)	282	1	1255394
14	11.7	0.0	3.3	chr14	103075814	103075843	(3967875)	+	(CCGCT)n	Simple_repeat	1	30	(0)	1256158
12	18.8	2.6	2.6	chr14	103075866	103075903	(3967815)	+	(CCGCAG)n	Simple_repeat	1	39	(0)	1256159
2297	7.9	0.6	2.5	chr14	103075955	103076272	(3967446)	+	AluSx1	SINE/Alu	1	312	(0)	1256160
1946	11.3	1.4	2.7	chr14	103076287	103076441	(3967277)	C	AluSg	SINE/Alu	(21)	289	134	1256161
29	0.0	0.0	0.0	chr14	103105359	103105383	(3938335)	+	(TG)n	Simple_repeat	1	25	(0)	1256205
18	0.0	0.0	3.9	chr14	103521142	103521167	(3522551)	+	(CCT)n	Simple_repeat	1	26	(0)	1256987
784	11.9	1.5	3.7	chr14	103528850	103528983	(3514735)	C	AluJo	SINE/Alu	(181)	131	1	1256995
15	22.5	1.8	3.6	chr14	103529138	103529192	(3514526)	+	(GGCGGA)n	Simple_repeat	1	56	(0)	1256996
2409	8.3	0.0	1.9	chr14	103714671	103714983	(3328735)	C	AluSg	SINE/Alu	(3)	307	1	1257363
229	27.7	6.0	4.7	chr14	104138112	104138259	(2905459)	+	MIR3	SINE/MIR	4	153	(55)	1258137
68	18.8	0.0	0.0	chr14	104150111	104150240	(2893478)	+	(CCTCCT)n	Simple_repeat	1	130	(0)	1258144
209	20.0	0.0	0.0	chr14	104150629	104150668	(2893050)	+	MIR3	SINE/MIR	115	154	(54)	1258145
451	22.5	5.8	2.2	chr14	105281571	105281761	(1761957)	+	L1MC3	LINE/L1	6147	6344	(0)	1259463
450	25.9	17.2	4.6	chr15	26126644	26126906	(75864283)	+	L1MEd	LINE/L1	1121	1423	(5663)	1271059
593	28.3	7.7	1.9	chr15	26126922	26127130	(75864059)	+	MER58A	DNA/hAT-Charlie	3	224	(0)	1271060
977	24.4	5.5	8.8	chr15	26127133	26127680	(75863509)	+	L1MEd	LINE/L1	1431	1959	(5127)	1271059
356	17.9	1.5	0.0	chr15	31129531	31129597	(70861592)	+	MADE2	DNA/TcMar-Mariner	13	80	(0)	1278137
33	7.5	0.0	0.0	chr15	40092435	40092476	(61898713)	+	(AC)n	Simple_repeat	1	42	(0)	1290671
12	22.6	2.3	2.3	chr15	40092604	40092646	(61898543)	+	A-rich	Low_complexity	1	44	(0)	1290672
718	27.5	4.4	1.4	chr15	40243317	40243537	(61747652)	+	MIR	SINE/MIR	34	261	(1)	1290917
182	21.3	7.8	0.0	chr15	40858212	40858258	(61132931)	C	L2a	LINE/L2	(1)	3425	3375	1292077
2136	13.6	2.9	0.0	chr15	43832434	43832735	(58158454)	C	AluSx	SINE/Alu	(0)	312	2	1297727
1783	13.0	2.2	2.2	chr15	43832744	43833046	(58158143)	C	AluSz6	SINE/Alu	(0)	312	7	1297728
21779	8.8	1.1	3.8	chr15	44038558	44044919	(57946270)	+	L1PA7	LINE/L1	2	6153	(1)	1298084
211	33.9	7.6	3.2	chr15	44085183	44085307	(57905882)	C	L2c	LINE/L2	(4)	3383	3253	1298148
45	6.0	0.0	0.0	chr15	47787912	47787963	(54203226)	+	(GT)n	Simple_repeat	1	52	(0)	1303864
386	25.9	14.4	0.7	chr15	51312364	51312507	(50678682)	C	MIRc	SINE/MIR	(18)	250	84	1309363
191	31.8	0.0	0.0	chr15	52018877	52018942	(49972247)	+	L2c	LINE/L2	3306	3371	(16)	1310538
199	21.1	0.0	0.0	chr15	52018907	52018944	(49972245)	+	MIR	SINE/MIR	217	254	(8)	1310539
12	16.3	2.8	2.7	chr15	52019123	52019158	(49972031)	+	G-rich	Low_complexity	1	37	(0)	1310540
597	32.3	7.2	3.8	chr15	52700835	52701196	(49289993)	+	L1M5	LINE/L1	4486	4837	(1309)	1311743
1400	15.3	14.5	0.4	chr15	52701197	52701438	(49289751)	+	AluJr	SINE/Alu	1	282	(30)	1311744
200	18.9	2.8	9.2	chr15	55318778	55318853	(46672336)	+	MIRc	SINE/MIR	121	191	(77)	1315308
484	29.3	3.5	1.2	chr15	55823488	55823656	(46167533)	+	MER124	DNA?	9	181	(216)	1316269
13	15.7	0.0	7.3	chr15	58038731	58038771	(43952418)	+	(TGGTAA)n	Simple_repeat	1	41	(0)	1319529
20	23.1	0.0	3.3	chr15	63121643	63121702	(38869487)	+	GA-rich	Low_complexity	1	60	(0)	1327996
11	21.6	9.3	0.0	chr15	63121768	63121821	(38869368)	+	(CCGCGCC)n	Simple_repeat	1	59	(0)	1327997
37	10.6	1.6	0.0	chr15	63381012	63381073	(38610116)	+	(TG)n	Simple_repeat	1	63	(0)	1328437
223	36.3	6.8	3.1	chr15	63381323	63381450	(38609739)	+	Tigger19a	DNA/TcMar-Tigger	60	192	(131)	1328438
2171	11.7	2.9	0.0	chr15	63393002	63393301	(38597888)	+	AluSz	SINE/Alu	1	309	(3)	1328459
305	20.3	3.0	1.5	chr15	63407629	63407693	(38583496)	+	MIRc	SINE/MIR	83	148	(120)	1328487
251	27.5	11.7	8.1	chr15	64146938	64147135	(37844054)	C	MIRb	SINE/MIR	(0)	268	63	1329850
859	6.9	0.0	0.8	chr15	65304677	65304793	(36686396)	+	U5	snRNA	1	116	(0)	1332345
706	12.5	0.0	1.8	chr15	65305005	65305116	(36686073)	+	AluSz	SINE/Alu	1	110	(202)	1332346
13	26.2	3.7	5.9	chr15	65377693	65377700	(36613489)	+	(CGG)n	Simple_repeat	1	12	(73)	1332490
332	24.8	8.0	8.0	chr15	65792875	65793036	(36198153)	+	MIR	SINE/MIR	101	262	(0)	1333346
454	32.6	7.3	1.4	chr15	66027802	66028019	(35963170)	+	MIRc	SINE/MIR	24	255	(13)	1333857
188	26.9	3.1	13.1	chr15	66356305	66356411	(35634778)	C	L2c	LINE/L2	(1)	3386	3291	1334509
13	18.3	2.6	2.5	chr15	66386883	66386921	(35604268)	+	(TCCCC)n	Simple_repeat	1	40	(0)	1334597
340	35.0	11.9	1.8	chr15	66772182	66772408	(35218781)	+	MIRb	SINE/MIR	15	267	(1)	1335421
588	34.6	6.3	2.1	chr15	66841913	66842248	(35148941)	+	L2b	LINE/L2	3024	3374	(1)	1335563
794	32.2	5.0	3.7	chr15	66843247	66843620	(35147569)	C	L2a	LINE/L2	(11)	3415	3037	1335565
980	18.3	4.0	0.5	chr15	66851494	66851713	(35139476)	C	L1MC5	LINE/L1	(9)	9295	9068	1335580
17	3.7	6.7	3.1	chr15	67147148	67147177	(34844012)	+	(GA)n	Simple_repeat	1	32	(0)	1336157
213	33.1	6.1	3.1	chr15	67254223	67254350	(34736839)	C	MIRc	SINE/MIR	(13)	255	124	1336323
11	20.6	5.1	0.0	chr15	67521309	67521347	(34469842)	+	(GCCCCGC)n	Simple_repeat	1	41	(0)	1336753
627	23.2	0.8	0.0	chr15	67691154	67691278	(34299911)	C	L2a	LINE/L2	(0)	3426	3301	1337010
367	29.5	7.3	1.2	chr15	67792971	67793138	(34198051)	C	Tigger15a	DNA/TcMar-Tigger	(19)	696	518	1337142
346	36.1	6.7	0.0	chr15	67863995	67864174	(34127015)	C	MIRc	SINE/MIR	(53)	215	23	1337258
229	24.3	6.8	3.0	chr15	68231312	68231433	(33759756)	C	MIRc	SINE/MIR	(62)	206	79	1337963
1729	26.0	13.8	2.3	chr15	68304542	68305532	(33685657)	+	L2a	LINE/L2	2294	3425	(1)	1338099
213	29.9	6.1	9.3	chr15	68305605	68305722	(33685467)	+	MIR	SINE/MIR	69	182	(80)	1338101
13	24.2	1.9	3.8	chr15	68700832	68700883	(33290306)	+	G-rich	Low_complexity	1	53	(0)	1338871
303	26.0	0.0	6.3	chr15	69143826	69143936	(32847253)	C	MIRb	SINE/MIR	(0)	268	165	1339719
245	19.7	0.0	13.2	chr15	69159963	69160038	(32831151)	+	MER94B	DNA/hAT-Blackjack	68	133	(0)	1339741
2021	26.8	9.3	4.6	chr15	69180263	69181328	(32809861)	C	L2a	LINE/L2	(1)	3425	2301	1339780
274	37.1	10.1	3.9	chr15	70037106	70037411	(31953778)	+	L2c	LINE/L2	3061	3387	(0)	1341375
336	39.2	2.7	0.0	chr15	70037525	70037667	(31953522)	C	L2b	LINE/L2	(7)	3368	3222	1341376
5198	20.8	8.3	3.2	chr15	70037737	70039134	(31952055)	+	L1MC5	LINE/L1	7828	9302	(2)	1341377
332	33.3	11.3	4.3	chr15	70089095	70089423	(31901766)	+	L2c	LINE/L2	3029	3383	(4)	1341452
224	11.4	0.0	0.0	chr15	70089421	70089455	(31901734)	C	MIR3	SINE/MIR	(52)	156	122	1341453
31	11.2	2.0	0.0	chr15	70097767	70097815	(31893374)	+	(AC)n	Simple_repeat	1	50	(0)	1341464
35	27.5	0.0	0.0	chr15	70100033	70100129	(31891060)	+	A-rich	Low_complexity	1	97	(0)	1341466
324	30.0	10.4	3.7	chr15	70100887	70101073	(31890116)	C	MIRb	SINE/MIR	(20)	248	48	1341467
322	33.3	5.6	1.9	chr15	70125837	70125992	(31865197)	C	L2c	LINE/L2	(14)	3373	3212	1341518
599	26.4	15.8	5.9	chr15	70420493	70420918	(31570271)	+	MLT1J	LTR/ERVL-MaLR	29	504	(8)	1342115
609	21.2	14.5	0.4	chr15	70760852	70761093	(31230096)	+	L1ME4b	LINE/L1	196	477	(415)	1342689
633	26.0	6.1	4.3	chr15	70761127	70761383	(31229806)	+	L1ME4b	LINE/L1	626	887	(5)	1342689
2421	12.0	0.0	1.6	chr15	71600731	71601046	(30390143)	C	AluSx1	SINE/Alu	(1)	311	1	1344019
421	31.0	5.8	8.6	chr15	71601047	71601213	(30389976)	C	MIRb	SINE/MIR	(109)	159	3	1344018
572	20.5	3.3	0.0	chr15	71708263	71708379	(30282810)	C	Zaphod3	DNA/hAT-Tip100	(2487)	136	16	1344208
18	30.1	0.0	1.6	chr15	72117939	72118001	(29873188)	+	(CCG)n	Simple_repeat	1	63	(0)	1344929
12	17.0	2.2	6.5	chr15	72230804	72230848	(29760341)	+	(GAGGATG)n	Simple_repeat	1	46	(0)	1345108
14	23.4	3.0	5.8	chr15	73052019	73052085	(28939104)	+	GA-rich	Low_complexity	1	69	(0)	1346523
16	23.9	0.0	0.0	chr15	74130202	74130236	(27860953)	+	G-rich	Low_complexity	1	35	(0)	1348311
44	0.0	0.0	0.0	chr15	74177528	74177565	(27813624)	+	(GT)n	Simple_repeat	1	38	(0)	1348391
15	0.0	0.0	0.0	chr15	74177626	74177642	(27813547)	+	(TG)n	Simple_repeat	1	17	(0)	1348392
195	36.2	3.1	2.3	chr15	74177845	74177974	(27813215)	+	MamSINE1	SINE/tRNA-RTE	9	139	(151)	1348393
273	28.2	6.6	0.0	chr15	74540674	74540758	(27450431)	C	L2	LINE/L2	(2906)	513	423	1349045
278	27.5	8.9	1.1	chr15	74546084	74546206	(27444983)	C	MIR3	SINE/MIR	(100)	130	3	1349060
184	33.3	0.0	6.0	chr15	74890362	74890428	(27100761)	C	L2	LINE/L2	(3334)	85	23	1349710
588	35.0	7.2	4.7	chr15	75573665	75574072	(26417117)	C	L2b	LINE/L2	(1)	3374	2956	1351112
310	29.1	6.0	9.5	chr15	75626484	75626673	(26364516)	C	MIRb	SINE/MIR	(0)	268	86	1351239
2522	4.3	0.0	1.0	chr15	75626930	75627230	(26363959)	C	AluY	SINE/Alu	(13)	298	1	1351240
189	30.3	3.8	15.6	chr15	78449279	78449368	(23541821)	C	MIRb	SINE/MIR	(161)	107	29	1355924
543	27.7	17.0	3.5	chr15	78449387	78449670	(23541519)	C	MER102a	DNA/hAT-Charlie	(0)	330	1	1355925
408	9.9	8.2	0.5	chr15	79091868	79092673	(22898516)	+	(AC)n	Simple_repeat	1	872	(0)	1357226
940	12.8	4.1	0.7	chr15	80702239	80702379	(21288810)	+	AluJo	SINE/Alu	22	167	(145)	1359959
16	4.5	0.0	0.0	chr15	80989715	80989737	(21001452)	+	(AGC)n	Simple_repeat	1	23	(0)	1360490
249	24.5	0.0	0.0	chr15	81729431	81729479	(20261710)	C	MIRb	SINE/MIR	(16)	252	204	1361726
101	5.2	4.9	0.0	chr15	81878199	81878340	(20112849)	+	(CT)n	Simple_repeat	1	149	(0)	1361954
194	29.6	1.8	0.0	chr15	82049860	82049913	(19941276)	C	L2b	LINE/L2	(202)	3173	3119	1362241
582	31.7	9.0	5.6	chr15	83061422	83061891	(18929298)	+	MLT1H2	LTR/ERVL-MaLR	3	489	(0)	1363969
17	17.9	3.7	3.6	chr15	83447824	83447877	(18543312)	+	(GCGGAG)n	Simple_repeat	1	56	(0)	1364647
401	25.5	16.5	5.8	chr15	83448181	83448438	(18542751)	C	L2b	LINE/L2	(73)	3314	3024	1364648
36	8.6	1.6	1.5	chr15	84143269	84143332	(17847857)	+	(GGCA)n	Simple_repeat	1	65	(0)	1365650
1946	15.2	2.3	0.0	chr15	84734672	84734966	(17256223)	C	AluJb	SINE/Alu	(10)	302	1	1366543
15	5.5	0.0	0.0	chr15	84754058	84754076	(17237113)	+	(TG)n	Simple_repeat	1	19	(0)	1366598
184	32.5	2.8	2.7	chr15	84754190	84754272	(17236917)	+	MIRc	SINE/MIR	76	159	(71)	1366599
2153	11.9	0.0	1.0	chr15	84754278	84754571	(17236618)	+	AluSz	SINE/Alu	2	292	(20)	1366600
38	28.1	4.8	2.3	chr15	84766539	84766706	(17224483)	+	GA-rich	Low_complexity	1	176	(0)	1366623
40	0.0	0.0	0.0	chr15	84766707	84766740	(17224449)	+	(GT)n	Simple_repeat	1	34	(0)	1366624
2021	11.2	0.0	4.5	chr15	85459212	85459498	(16531691)	C	AluSx1	SINE/Alu	(38)	274	1	1367841
2494	8.1	0.0	0.0	chr15	85459502	85459798	(16531391)	C	AluY	SINE/Alu	(14)	297	1	1367842
197	28.3	4.2	12.4	chr15	89430720	89430824	(12560365)	+	L2c	LINE/L2	3275	3370	(17)	1374190
12	16.6	2.6	5.0	chr15	89430904	89430942	(12560247)	+	G-rich	Low_complexity	1	40	(0)	1374191
11	16.4	7.8	3.6	chr15	89655040	89655090	(12336099)	+	(GGAGCG)n	Simple_repeat	1	55	(0)	1374628
327	24.4	8.9	2.2	chr15	90594630	90594771	(11396418)	C	MIRb	SINE/MIR	(7)	255	99	1376697
273	31.9	2.1	1.1	chr15	90646773	90646867	(11344322)	+	L2c	LINE/L2	3273	3368	(19)	1376774
1708	17.4	4.4	1.4	chr15	90901819	90902167	(11089022)	C	MLT1A0	LTR/ERVL-MaLR	(1)	364	5	1377332
456	31.5	5.6	4.5	chr15	90902168	90902294	(11088895)	+	L1ME4c	LINE/L1	410	530	(300)	1377331
389	24.9	18.8	1.1	chr15	90932171	90932349	(11058840)	+	MIRb	SINE/MIR	34	251	(17)	1377369
195	35.5	8.8	5.6	chr15	90932757	90932953	(11058236)	C	L2c	LINE/L2	(47)	3340	3137	1377370
12	21.7	0.0	4.9	chr15	90994724	90994764	(10996425)	+	(TGGCC)n	Simple_repeat	1	41	(0)	1377487
18	0.0	0.0	0.0	chr15	92809946	92809965	(9181224)	+	(T)n	Simple_repeat	1	20	(0)	1380510
16	16.8	0.0	0.0	chr15	96330806	96330833	(5660356)	+	(GT)n	Simple_repeat	1	28	(0)	1385726
14	16.8	0.0	0.0	chr15	98687056	98687083	(3304106)	+	GA-rich	Low_complexity	1	28	(0)	1389042
355	27.3	5.1	4.9	chr15	98687116	98687255	(3303934)	C	L2b	LINE/L2	(2)	3385	3249	1389043
44	0.0	0.0	0.0	chr15	99809218	99809255	(2181934)	+	(GT)n	Simple_repeat	1	38	(0)	1390649
2393	10.7	0.3	0.0	chr15	99809416	99809714	(2181475)	C	AluSg4	SINE/Alu	(9)	301	2	1390650
15	15.3	0.0	5.0	chr15	101723942	101723981	(267208)	+	(GCAGG)n	Simple_repeat	1	40	(0)	1393180
1937	7.0	13.1	0.4	chr16	402163	402434	(89935911)	C	AluSx	SINE/Alu	(0)	312	1	1394695
13	18.2	0.0	0.0	chr16	727578	727608	(89610737)	+	(CGTGGC)n	Simple_repeat	1	31	(0)	1395120
178	20.1	0.5	3.6	chr16	778949	779367	(89558978)	+	(TCAC)n	Simple_repeat	1	421	(0)	1395205
13	30.9	1.2	4.8	chr16	981067	981084	(89357261)	+	(GCCCTC)n	Simple_repeat	2	83	(0)	1395375
57	0.0	0.0	0.0	chr16	981283	981303	(89357042)	+	(TG)n	Simple_repeat	1	21	(0)	1395376
53	0.0	0.0	0.0	chr16	981304	981348	(89356997)	+	(GA)n	Simple_repeat	1	45	(0)	1395377
57	0.0	0.0	0.0	chr16	981349	981391	(89356954)	+	(TG)n	Simple_repeat	2	44	(0)	1395378
15	12.2	0.0	0.0	chr16	1174514	1174540	(89163805)	+	(GGGA)n	Simple_repeat	1	27	(0)	1395568
14	23.1	0.0	4.1	chr16	1174856	1174904	(89163441)	+	(CAGGCGG)n	Simple_repeat	1	49	(0)	1395569
373	20.3	0.0	3.3	chr16	1710064	1710148	(88628197)	+	AluY	SINE/Alu	1	71	(230)	1396288
263	22.2	5.8	4.7	chr16	1710086	1710170	(88628175)	C	SVA_A	Retroposon/SVA	(1062)	325	240	1396289
623	10.1	0.0	0.0	chr16	1710136	1710214	(88628131)	C	FLAM_A	SINE/Alu	(26)	116	38	1396290
1396	15.1	0.4	4.6	chr16	1710241	1710503	(88627842)	+	AluSx	SINE/Alu	61	312	(0)	1396288
17	13.7	0.0	0.0	chr16	1773265	1773296	(88565049)	+	(GCCGGG)n	Simple_repeat	1	32	(0)	1396373
12	13.1	2.7	5.3	chr16	2047761	2047797	(88290548)	+	(CGGCTC)n	Simple_repeat	1	38	(0)	1396835
15	24.9	0.0	3.9	chr16	2268061	2268111	(88070234)	+	(CCG)n	Simple_repeat	1	51	(0)	1397131
3345	15.8	0.9	3.2	chr16	2799976	2800278	(87538067)	C	Tigger3	DNA/TcMar-Tigger	(0)	3029	2740	1397947
629	4.1	0.0	0.0	chr16	3152900	3152972	(87185373)	+	tRNA-Arg-AGG	tRNA	1	73	(3)	1398603
617	0.0	0.0	0.0	chr16	3172048	3172119	(87166226)	+	tRNA-Pro-CCG	tRNA	1	72	(3)	1398650
368	29.6	21.1	3.3	chr16	4346221	4346433	(85991912)	+	MIR	SINE/MIR	2	262	(0)	1400978
366	27.2	0.0	1.4	chr16	4346586	4346689	(85991656)	+	MIRb	SINE/MIR	16	123	(145)	1400979
49	25.4	0.0	2.3	chr16	5065043	5065174	(85273171)	+	(TGTG)n	Simple_repeat	1	132	(0)	1402492
965	23.3	6.4	3.1	chr16	10651184	10651502	(79686843)	+	L2a	LINE/L2	3064	3393	(33)	1413937
281	27.9	1.2	0.0	chr16	10651524	10651602	(79686743)	C	MIR	SINE/MIR	(0)	262	183	1413938
2170	10.3	0.0	0.7	chr16	10651679	10651980	(79686365)	+	AluSx1	SINE/Alu	2	301	(11)	1413939
2159	14.5	0.0	0.3	chr16	11191541	11191850	(79146495)	+	AluSz6	SINE/Alu	2	310	(2)	1415066
769	27.0	12.3	2.1	chr16	11191851	11192470	(79145875)	C	L2a	LINE/L2	(18)	3357	2712	1415065
243	29.0	0.0	0.0	chr16	11251295	11251356	(79086989)	C	MIRb	SINE/MIR	(15)	253	192	1415238
211	20.0	7.4	0.0	chr16	11251383	11251432	(79086913)	+	MIR	SINE/MIR	143	196	(66)	1415239
2012	15.4	0.0	1.3	chr16	11251510	11251815	(79086530)	+	AluJo	SINE/Alu	2	303	(9)	1415240
40	14.1	0.0	0.0	chr16	11422421	11422508	(78915837)	+	(GGAAA)n	Simple_repeat	1	88	(0)	1415636
15	20.1	2.0	4.0	chr16	11422496	11422544	(78915801)	+	(CAG)n	Simple_repeat	1	50	(0)	1415637
424	30.5	5.4	0.0	chr16	11422612	11422752	(78915593)	C	L2a	LINE/L2	(10)	3416	3268	1415638
327	35.8	0.9	0.0	chr16	11506325	11506433	(78831912)	C	MER63B	DNA/hAT-Blackjack	(326)	110	1	1415842
806	28.1	4.5	0.0	chr16	12037114	12037323	(78301022)	C	MER58A	DNA/hAT-Charlie	(2)	222	3	1417121
640	21.6	0.0	0.0	chr16	12037394	12037518	(78300827)	C	MER96B	DNA/hAT-Tip100	(0)	417	293	1417122
610	1.4	0.0	0.0	chr16	14285893	14285964	(76052381)	+	tRNA-Thr-ACG	tRNA	1	72	(3)	1421772
329	29.1	8.6	1.7	chr16	15590919	15591037	(74747308)	C	MIR	SINE/MIR	(10)	252	125	1424781
288	25.5	11.2	6.1	chr16	15591102	15591217	(74747128)	C	MIR	SINE/MIR	(47)	183	56	1424782
2565	6.7	0.0	0.0	chr16	18998473	18998771	(71339574)	+	AluY	SINE/Alu	1	299	(12)	1432406
341	32.1	14.6	5.1	chr16	19521089	19521482	(70816863)	+	L2a	LINE/L2	2932	3369	(57)	1433765
32	7.3	0.0	0.0	chr16	19522421	19522464	(70815881)	+	(TCAAT)n	Simple_repeat	1	44	(0)	1433767
373	31.8	3.5	0.0	chr16	19522466	19522575	(70815770)	C	L2a	LINE/L2	(37)	3389	3276	1433768
268	22.4	7.6	4.5	chr16	19522572	19522660	(70815685)	C	MIRb	SINE/MIR	(3)	265	174	1433769
15	12.0	0.0	0.0	chr16	21301852	21301878	(69036467)	+	(GCG)n	Simple_repeat	1	27	(0)	1437616
251	23.3	8.2	15.1	chr16	22024803	22024867	(68313478)	+	MIR	SINE/MIR	1	69	(193)	1439133
1958	17.0	0.3	2.0	chr16	22024868	22025167	(68313178)	+	AluJo	SINE/Alu	3	297	(15)	1439134
251	23.3	8.2	15.1	chr16	22025168	22025207	(68313138)	+	MIR	SINE/MIR	70	98	(164)	1439133
388	14.3	0.0	0.0	chr16	22298231	22298293	(68040052)	+	MIR	SINE/MIR	118	180	(82)	1439786
370	35.0	4.3	1.3	chr16	22298460	22298618	(68039727)	C	MIR	SINE/MIR	(97)	165	2	1439787
486	30.6	0.6	4.2	chr16	22948634	22948800	(67389545)	C	MIR	SINE/MIR	(84)	178	18	1441162
29	10.8	0.0	0.0	chr16	22949021	22949070	(67389275)	+	(TTCA)n	Simple_repeat	1	50	(0)	1441163
2573	17.3	2.5	4.2	chr16	25049628	25050152	(65288193)	+	Tigger3b	DNA/TcMar-Tigger	25	540	(691)	1446106
2110	11.3	5.8	0.0	chr16	25050153	25050443	(65287902)	C	AluSx3	SINE/Alu	(1)	310	2	1446107
419	32.6	9.7	4.8	chr16	28202353	28202793	(62135552)	C	L2c	LINE/L2	(589)	2830	2366	1452844
327	28.2	8.6	12.0	chr16	28202797	28202993	(62135352)	C	L2c	LINE/L2	(1269)	2150	1954	1452844
2300	9.8	0.3	4.6	chr16	28545717	28546074	(61792271)	+	AluSq2	SINE/Alu	1	313	(0)	1453809
209	26.9	6.1	0.0	chr16	28546081	28546173	(61792172)	C	MIR3	SINE/MIR	(1)	207	109	1453810
281	25.6	4.9	0.0	chr16	28546179	28546256	(61792089)	C	L2a	LINE/L2	(0)	3426	3345	1453811
2332	9.0	0.3	0.3	chr16	28546260	28546559	(61791786)	+	AluSq2	SINE/Alu	1	300	(13)	1453812
22	0.0	0.0	0.0	chr16	28822936	28822959	(61515386)	+	(C)n	Simple_repeat	1	24	(0)	1454525
215	27.7	15.1	1.0	chr16	29791036	29791137	(60547208)	+	MIR1_Amn	SINE/MIR	39	157	(73)	1456580
11	17.1	2.9	2.8	chr16	29995281	29995315	(60343030)	+	(CCTCCG)n	Simple_repeat	1	36	(0)	1457035
13	21.1	2.6	0.0	chr16	30010872	30010909	(60327436)	+	(GCCCCT)n	Simple_repeat	1	39	(0)	1457056
1649	25.1	12.3	5.8	chr16	30416218	30416803	(59921542)	+	L2a	LINE/L2	2265	2883	(536)	1457979
713	15.3	0.2	1.1	chr16	30466057	30466193	(59872152)	C	AluJb	SINE/Alu	(166)	136	2	1458117
260	19.5	0.0	0.0	chr16	30466196	30466236	(59872109)	C	L2a	LINE/L2	(565)	2854	2814	1458114
109	12.6	1.0	2.0	chr16	30466305	30466497	(59871848)	+	(TCTT)n	Simple_repeat	1	195	(0)	1458118
1708	14.5	3.6	4.2	chr16	30475735	30475984	(59862361)	C	AluJb	SINE/Alu	(0)	312	61	1458140
832	16.7	9.1	0.0	chr16	30583711	30583860	(59754485)	+	FRAM	SINE/Alu	1	165	(11)	1458396
2147	11.2	0.3	1.0	chr16	30583862	30584165	(59754180)	+	AluSx1	SINE/Alu	2	303	(9)	1458397
2046	7.2	11.0	0.0	chr16	30634914	30635189	(59703156)	+	AluSp	SINE/Alu	1	310	(3)	1458517
18	7.7	0.0	0.0	chr16	30698185	30698212	(59640133)	+	(GTG)n	Simple_repeat	1	28	(0)	1458687
19	0.0	0.0	0.0	chr16	30698719	30698742	(59639603)	+	(GAGC)n	Simple_repeat	1	24	(0)	1458688
12	28.1	3.9	0.0	chr16	30775721	30775772	(59562573)	+	(CTGGCG)n	Simple_repeat	1	54	(0)	1458832
11	19.1	5.9	3.7	chr16	30775915	30775965	(59562380)	+	G-rich	Low_complexity	1	54	(0)	1458833
17	22.8	6.2	2.4	chr16	30805612	30805691	(59532654)	+	(TCCGGC)n	Simple_repeat	1	85	(0)	1458895
193	28.0	3.9	0.0	chr16	30806098	30806172	(59532173)	C	MIR3	SINE/MIR	(106)	102	25	1458896
24	24.8	4.8	2.7	chr16	30894116	30894220	(59444125)	+	(CCGGC)n	Simple_repeat	1	110	(0)	1459123
250	26.2	0.0	3.2	chr16	30894500	30894562	(59443783)	C	L2c	LINE/L2	(0)	3387	3327	1459124
210	31.6	7.3	5.8	chr16	30956924	30957044	(59381301)	+	MIR1_Amn	SINE/MIR	31	153	(77)	1459288
21	19.2	3.2	3.1	chr16	30958013	30958075	(59380270)	+	(CGC)n	Simple_repeat	1	65	(0)	1459289
1727	23.4	5.2	0.2	chr16	35463369	35463838	(54874507)	C	L1MB2	LINE/L1	(2)	6169	5675	1464850
9060	25.1	4.1	5.1	chr16	35596015	35598743	(54739602)	C	HERVIP10FH-int	LTR/ERV1	(386)	4716	2041	1464969
15	26.5	0.0	4.9	chr16	35598947	35599007	(54739338)	+	(TTTTCT)n	Simple_repeat	1	61	(0)	1464970
1990	14.2	0.0	1.4	chr16	46771354	46771641	(43566704)	+	AluJo	SINE/Alu	11	294	(18)	1466005
1263	13.0	0.5	1.1	chr16	46889058	46889242	(43449103)	C	AluJb	SINE/Alu	(43)	269	86	1466262
25	22.8	2.5	2.4	chr16	50153139	50153218	(40185127)	+	G-rich	Low_complexity	1	82	(0)	1471932
205	29.2	0.0	5.8	chr16	51125115	51125183	(39213162)	+	L2a	LINE/L2	3361	3425	(1)	1473796
2074	11.1	0.0	0.4	chr16	53990639	53990945	(36347400)	C	AluSx1	SINE/Alu	(0)	312	23	1478757
436	24.3	8.1	2.9	chr16	56547894	56548033	(33790312)	+	MIRb	SINE/MIR	27	174	(94)	1483255
365	29.6	0.9	0.9	chr16	57285345	57285453	(33052892)	+	MIRb	SINE/MIR	117	225	(43)	1484722
15	27.7	0.0	0.0	chr16	57285504	57285542	(33052803)	+	(CA)n	Simple_repeat	1	39	(0)	1484723
384	22.6	16.4	0.0	chr16	57285578	57285679	(33052666)	C	L2a	LINE/L2	(0)	3426	3305	1484724
1046	13.4	0.0	5.1	chr16	57285723	57285745	(33052600)	C	L1MA6	LINE/L1	(2)	6298	6278	1484725
1143	29.2	6.8	1.4	chr16	57341848	57342267	(32996078)	+	MLT1J2	LTR/ERVL-MaLR	5	448	(0)	1484867
501	26.6	11.3	1.7	chr16	57447958	57448236	(32890109)	C	MER113	DNA/hAT-Charlie	(0)	521	11	1485091
466	31.6	13.7	0.5	chr16	66879815	66880202	(23458143)	C	L2	LINE/L2	(620)	2799	2353	1500613
2040	8.9	6.4	0.0	chr16	67327232	67327522	(23010823)	+	AluSx	SINE/Alu	2	312	(0)	1501442
407	31.1	7.5	6.3	chr16	67678575	67678797	(22659548)	+	MIRb	SINE/MIR	14	239	(29)	1502136
1947	16.9	0.3	0.0	chr16	67678886	67679186	(22659159)	+	AluJo	SINE/Alu	1	302	(10)	1502137
508	27.1	4.9	1.9	chr16	67856834	67856991	(22481354)	+	MIRb	SINE/MIR	60	222	(46)	1502493
731	7.8	1.9	0.0	chr16	68529604	68529706	(21808639)	C	L1MA1	LINE/L1	(0)	6302	6198	1503706
8536	16.4	6.1	3.1	chr16	68576773	68577845	(21760500)	+	L1M4	LINE/L1	616	1722	(5795)	1503793
716	14.3	10.1	0.1	chr16	68577841	68578009	(21760336)	+	L1M4	LINE/L1	2431	2688	(3958)	1503793
248	22.6	6.1	0.0	chr16	68731939	68732000	(21606345)	+	L1MC5a	LINE/L1	2657	2722	(55)	1504181
853	16.0	1.5	0.0	chr16	69310499	69310629	(21027716)	C	FLAM_C	SINE/Alu	(10)	133	1	1505542
212	29.1	5.2	0.0	chr16	69310636	69310690	(21027655)	+	L2b	LINE/L2	3288	3345	(30)	1505543
1134	8.2	0.0	0.0	chr16	69310691	69310825	(21027520)	+	AluSx	SINE/Alu	150	284	(28)	1505544
12	9.2	0.0	4.0	chr16	69310826	69310850	(21027495)	+	(TCAA)n	Simple_repeat	1	25	(0)	1505545
304	28.1	7.5	4.3	chr16	69310883	69311023	(21027322)	C	MIRb	SINE/MIR	(10)	258	113	1505546
2861	1.3	0.0	0.0	chr16	70097361	70097668	(20240677)	+	AluYa5	SINE/Alu	1	308	(3)	1507223
2415	7.5	0.0	0.3	chr16	70164893	70165187	(20173158)	C	AluSc5	SINE/Alu	(15)	294	1	1507363
525	29.5	2.7	1.1	chr16	70683215	70683393	(19654952)	+	MIRb	SINE/MIR	81	260	(8)	1508503
593	4.1	0.0	0.0	chr16	71426493	71426565	(18911780)	+	tRNA-Met	tRNA	1	73	(3)	1509672
1222	18.6	7.5	0.4	chr16	71426948	71427184	(18911161)	+	AluJb	SINE/Alu	1	255	(57)	1509673
582	23.6	5.2	0.0	chr16	71903587	71903696	(18434649)	C	FLAM_A	SINE/Alu	(25)	117	2	1510609
3700	21.9	6.4	7.7	chr16	71903699	71904137	(18434208)	C	L1MEf	LINE/L1	(3415)	3591	3185	1510606
61	0.0	0.0	0.0	chr16	72931405	72931456	(17406889)	+	(AC)n	Simple_repeat	1	52	(0)	1512164
16	0.0	0.0	0.0	chr16	72931567	72931584	(17406761)	+	(A)n	Simple_repeat	1	18	(0)	1512165
18	0.0	0.0	0.0	chr16	73070711	73070730	(17267615)	+	(TC)n	Simple_repeat	1	20	(0)	1512351
25	18.4	0.0	0.0	chr16	73074568	73074624	(17263721)	+	(GATAAT)n	Simple_repeat	1	57	(0)	1512361
15	18.7	0.0	0.0	chr16	73074691	73074722	(17263623)	+	GA-rich	Low_complexity	1	32	(0)	1512362
1885	17.6	0.3	2.5	chr16	73074789	73075107	(17263238)	C	AluJb	SINE/Alu	(0)	312	1	1512363
243	20.6	8.1	0.0	chr16	74430300	74430367	(15907978)	C	L1MEf	LINE/L1	(841)	5305	5232	1514676
820	17.4	0.0	0.0	chr16	74488260	74488391	(15849954)	+	FLAM_C	SINE/Alu	1	132	(11)	1514786
1686	17.9	4.3	0.3	chr16	74588428	74588718	(15749627)	C	AluJb	SINE/Alu	(9)	303	1	1514985
313	31.6	7.6	7.2	chr16	74588719	74588866	(15749479)	+	MIRc	SINE/MIR	81	237	(31)	1514984
12	26.5	5.0	1.6	chr16	74985009	74985068	(15353277)	+	(CGC)n	Simple_repeat	1	63	(0)	1515869
2158	9.0	0.3	5.8	chr16	75454337	75454646	(14883699)	+	AluSx3	SINE/Alu	1	293	(18)	1516831
822	19.6	13.2	0.0	chr16	77882467	77882670	(12455675)	C	MIR	SINE/MIR	(14)	248	14	1520668
1066	25.4	7.8	0.3	chr16	78184844	78185127	(12153218)	C	MLT1I	LTR/ERVL-MaLR	(7)	404	98	1521281
326	18.8	2.0	1.0	chr16	83967365	83968058	(6370287)	+	(GGAT)n	Simple_repeat	1	708	(0)	1531949
450	28.4	4.2	4.2	chr16	84362335	84362525	(5975820)	+	MER117	DNA/hAT-Charlie	7	197	(0)	1532688
1732	16.6	2.1	1.4	chr16	84543826	84544115	(5794230)	C	AluJr	SINE/Alu	(20)	292	1	1533033
77	29.6	3.0	5.7	chr16	84618272	84618768	(5719577)	+	(CCTCTC)n	Simple_repeat	1	512	(0)	1533213
370	31.2	4.3	0.0	chr16	84691563	84691716	(5646629)	+	MamRep137	DNA/TcMar-Tigger	219	379	(131)	1533400
850	27.2	3.3	1.5	chr16	84691721	84691989	(5646356)	+	MLT1C	LTR/ERVL-MaLR	187	460	(7)	1533401
451	32.5	7.6	1.4	chr16	85029797	85030005	(5308340)	C	MIRc	SINE/MIR	(29)	239	17	1534050
2941	25.8	6.3	2.1	chr16	85046675	85047999	(5290346)	C	L1MD2	LINE/L1	(5217)	1423	47	1534085
362	33.5	4.5	10.5	chr16	85227142	85227602	(5110743)	C	L2c	LINE/L2	(18)	3408	2963	1534437
50	33.5	1.8	1.3	chr16	85245870	85246089	(5092256)	+	(TG)n	Simple_repeat	1	224	(0)	1534483
430	30.5	13.2	3.4	chr16	85367341	85367666	(4970679)	C	L2b	LINE/L2	(5)	3370	3008	1534719
399	24.2	6.6	0.0	chr16	85367675	85367773	(4970572)	+	L2b	LINE/L2	3267	3372	(3)	1534720
2455	7.3	0.0	1.3	chr16	85367842	85368144	(4970201)	C	AluSp	SINE/Alu	(5)	308	10	1534721
230	21.9	2.4	1.2	chr16	85400250	85400915	(4937430)	+	(TG)n	Simple_repeat	1	674	(0)	1534780
35	42.4	0.5	0.5	chr16	85514880	85515081	(4823264)	+	(TGTG)n	Simple_repeat	1	203	(0)	1534987
390	31.3	11.5	4.8	chr16	85579848	85580179	(4758166)	C	L2a	LINE/L2	(3)	3423	3016	1535096
13	29.1	0.0	2.0	chr16	85580296	85580344	(4758001)	+	G-rich	Low_complexity	1	49	(0)	1535097
679	0.0	0.0	0.0	chr16	87384022	87384094	(2954251)	C	tRNA-Met_	tRNA	(3)	73	1	1538340
1537	22.8	5.5	0.0	chr16	87486253	87486581	(2851764)	+	Tigger3a	DNA/TcMar-Tigger	1	348	(0)	1538499
17	12.7	0.0	0.0	chr16	87486658	87486683	(2851662)	+	(A)n	Simple_repeat	1	26	(0)	1538500
406	19.9	5.2	2.6	chr16	87501908	87503095	(2835250)	+	(TG)n	Simple_repeat	1	1250	(0)	1538530
351	24.8	0.6	0.1	chr16	87597148	87597945	(2740400)	+	(ATCATC)n	Simple_repeat	1	803	(0)	1538752
186	23.4	0.0	7.8	chr16	88662872	88662922	(1675423)	+	MIR3	SINE/MIR	109	155	(53)	1540287
12	21.7	0.0	4.9	chr16	88662960	88663000	(1675345)	+	(CCCGG)n	Simple_repeat	1	41	(0)	1540288
15	23.0	0.0	5.4	chr16	89167665	89167720	(1170625)	+	(GCCCCCA)n	Simple_repeat	1	56	(0)	1540854
301	23.1	22.3	1.8	chr16	89185701	89185863	(1152482)	+	L2b	LINE/L2	3155	3360	(15)	1540878
195	16.1	0.0	0.0	chr16	89185927	89185957	(1152388)	+	L2b	LINE/L2	3330	3360	(15)	1540878
185	25.5	0.0	6.0	chr16	89185974	89186023	(1152322)	+	L2b	LINE/L2	3314	3360	(15)	1540879
195	25.5	0.0	6.0	chr16	89186101	89186150	(1152195)	+	L2b	LINE/L2	3314	3360	(15)	1540880
202	15.6	0.0	0.0	chr16	89186152	89186183	(1152162)	+	L2b	LINE/L2	3329	3360	(15)	1540880
180	19.4	0.0	0.0	chr16	89186214	89186244	(1152101)	+	L2b	LINE/L2	3329	3359	(16)	1540880
1585	9.6	0.9	1.4	chr16	89504927	89505144	(833201)	C	AluSc8	SINE/Alu	(94)	217	1	1541386
202	27.9	7.1	8.1	chr16	89505211	89505296	(833049)	C	MIRc	SINE/MIR	(121)	147	63	1541387
719	11.3	0.9	0.8	chr16	89817057	89817172	(521173)	+	FLAM_C	SINE/Alu	6	117	(16)	1541909
2513	6.7	0.0	0.6	chr16	89817173	89817485	(520860)	C	AluSx	SINE/Alu	(0)	312	2	1541910
213	29.7	5.1	1.3	chr16	89918431	89918505	(419840)	C	L3	LINE/CR1	(150)	3949	3872	1542082
15	18.1	0.0	0.0	chr17	410591	410622	(82846819)	+	GA-rich	Low_complexity	1	32	(0)	1545160
181	35.4	0.0	0.0	chr17	541333	541380	(82716061)	C	L2c	LINE/L2	(7)	3380	3333	1545339
231	25.5	0.0	1.2	chr17	541406	541490	(82715951)	C	L2a	LINE/L2	(7)	3419	3336	1545340
216	29.2	0.0	0.0	chr17	541917	541964	(82715477)	C	L2c	LINE/L2	(7)	3380	3333	1545343
201	28.2	0.0	0.0	chr17	541966	542004	(82715437)	C	L2c	LINE/L2	(16)	3371	3333	1545343
280	33.7	5.0	9.9	chr17	542121	542311	(82715130)	C	MIRb	SINE/MIR	(14)	254	74	1545344
50	24.0	0.6	4.8	chr17	1179471	1179636	(82077805)	+	(TCCCGA)n	Simple_repeat	1	167	(0)	1546511
996	16.0	0.0	1.8	chr17	2207983	2208151	(81049290)	+	FRAM	SINE/Alu	1	166	(10)	1548658
254	34.6	5.7	0.0	chr17	2395920	2396052	(80861389)	C	MIR1_Amn	SINE/MIR	(9)	221	81	1549017
320	33.3	9.1	5.7	chr17	2602434	2602729	(80654712)	+	L2	LINE/L2	2554	2860	(559)	1549550
392	17.7	4.8	1.2	chr17	2602742	2602832	(80654609)	C	MIR	SINE/MIR	(5)	257	167	1549551
2163	10.6	1.7	0.0	chr17	2634883	2635174	(80622267)	+	AluSq	SINE/Alu	2	298	(15)	1549625
15	22.9	8.1	1.2	chr17	2924522	2924595	(80332846)	+	GA-rich	Low_complexity	1	80	(0)	1550262
12	23.1	0.0	4.5	chr17	3893402	3893445	(79363996)	+	(GGCGA)n	Simple_repeat	1	44	(0)	1551951
529	34.4	3.7	0.8	chr17	3893748	3894011	(79363430)	+	L2c	LINE/L2	2547	2818	(601)	1551952
324	29.5	13.8	3.1	chr17	3894907	3895007	(79362434)	C	MIRb	SINE/MIR	(99)	169	59	1551954
316	37.9	4.3	3.1	chr17	3895036	3895359	(79362082)	C	L2b	LINE/L2	(1266)	2153	1826	1551948
693	29.1	5.9	0.3	chr17	3958046	3958281	(79299160)	+	MIR	SINE/MIR	2	240	(22)	1552080
405	22.0	10.7	3.5	chr17	3958302	3958414	(79299027)	+	L2a	LINE/L2	3303	3424	(2)	1552081
257	37.0	3.0	0.0	chr17	3958413	3958539	(79298902)	+	L2	LINE/L2	2820	2950	(469)	1552082
12	12.8	8.8	0.0	chr17	4948398	4948431	(78309010)	+	(GCT)n	Simple_repeat	1	37	(0)	1554112
1631	10.5	6.1	1.6	chr17	5439459	5439710	(77817731)	+	MER21A	LTR/ERVL	1	264	(667)	1555142
252	29.3	2.6	2.6	chr17	5439643	5439719	(77817722)	+	MER39B	LTR/ERV1	279	355	(298)	1555143
2929	14.8	7.1	1.0	chr17	5439718	5440235	(77817206)	+	MER21A	LTR/ERVL	378	929	(2)	1555144
197	21.3	7.8	0.0	chr17	5440361	5440407	(77817034)	+	L2c	LINE/L2	3280	3330	(57)	1555145
1149	19.4	8.5	1.2	chr17	5440507	5440746	(77816695)	+	MER21A	LTR/ERVL	378	636	(295)	1555146
19	17.3	2.1	2.0	chr17	6444058	6444105	(76813336)	+	G-rich	Low_complexity	1	49	(0)	1557110
697	26.4	3.0	0.8	chr17	7174610	7176778	(76080663)	+	(CA)n	Simple_repeat	1	2233	(0)	1558389
29	0.0	0.0	0.0	chr17	7176793	7176817	(76080624)	+	(CA)n	Simple_repeat	1	25	(0)	1558389
35	0.0	2.8	0.0	chr17	7176937	7176972	(76080469)	+	(CCCCAG)n	Simple_repeat	1	37	(0)	1558390
14	22.6	2.4	0.0	chr17	7356529	7356569	(75900872)	+	(CCTC)n	Simple_repeat	1	42	(0)	1558670
15	6.5	9.1	0.0	chr17	7484513	7484545	(75772896)	+	(CCTTTT)n	Simple_repeat	1	36	(0)	1558912
707	2.4	0.0	0.0	chr17	8120314	8120395	(75137046)	C	tRNA-Leu-CTY	tRNA	(3)	82	1	1560130
678	0.0	0.0	0.0	chr17	8187593	8187666	(75069775)	+	tRNA-Ile-ATT	tRNA	1	74	(3)	1560266
15	31.6	0.0	3.0	chr17	8189693	8189758	(75067683)	+	(CCT)n	Simple_repeat	1	66	(0)	1560268
650	1.4	0.0	0.0	chr17	8220869	8220940	(75036501)	C	tRNA-Trp-TGG	tRNA	(3)	72	1	1560357
659	1.4	0.0	0.0	chr17	8221548	8221619	(75035822)	+	tRNA-Gly-GGA	tRNA	1	72	(3)	1560359
2118	11.0	0.0	0.3	chr17	8248569	8248858	(75008583)	C	AluJb	SINE/Alu	(23)	289	1	1560404
288	24.3	16.4	7.5	chr17	8419975	8420134	(74837307)	+	MIR3	SINE/MIR	21	197	(11)	1560793
662	21.1	8.4	0.0	chr17	8420133	8420274	(74837167)	+	MIRb	SINE/MIR	63	217	(51)	1560794
238	12.1	0.0	0.0	chr17	8420287	8420319	(74837122)	+	MER57B1	LTR/ERV1	299	331	(70)	1560795
249	27.4	0.0	0.0	chr17	8420335	8420396	(74837045)	+	MIRb	SINE/MIR	207	268	(0)	1560794
769	18.8	9.6	0.6	chr17	14081056	14081216	(69176225)	+	MER58A	DNA/hAT-Charlie	44	220	(4)	1570881
20	23.5	1.5	2.9	chr17	14081319	14081386	(69176055)	+	A-rich	Low_complexity	1	69	(0)	1570882
524	23.4	5.4	0.7	chr17	15965994	15966135	(67291306)	+	Tigger9a	DNA/TcMar-Tigger	580	728	(4)	1573985
16	18.9	0.0	0.0	chr17	15999349	15999378	(67258063)	+	(T)n	Simple_repeat	1	30	(0)	1574053
205	34.9	17.1	0.0	chr17	16028247	16028372	(67229069)	+	MER5B	DNA/hAT-Charlie	7	158	(20)	1574095
559	30.3	9.2	1.6	chr17	16313710	16314021	(66943420)	+	L4_A_Mam	LINE/RTE-X	4549	4886	(104)	1574678
1267	12.7	21.7	0.4	chr17	16386331	16386566	(66870875)	+	AluSz6	SINE/Alu	3	302	(10)	1574868
1106	14.0	0.0	0.0	chr17	16386580	16386743	(66870698)	+	AluJr	SINE/Alu	139	302	(10)	1574869
2313	9.5	0.0	0.3	chr17	16536187	16536519	(66720922)	+	AluSc	SINE/Alu	1	309	(0)	1575178
212	20.9	0.0	0.0	chr17	17742311	17742353	(65515088)	+	L2a	LINE/L2	3383	3425	(1)	1577259
48	6.8	0.0	0.0	chr17	17742416	17742477	(65514964)	+	(TGAA)n	Simple_repeat	1	62	(0)	1577260
17	0.0	0.0	0.0	chr17	17824589	17824607	(65432834)	+	(AC)n	Simple_repeat	1	19	(0)	1577412
2080	13.3	0.0	0.0	chr17	17839130	17839414	(65418027)	C	AluSz6	SINE/Alu	(27)	285	1	1577451
451	25.2	11.2	4.4	chr17	17839905	17840062	(65417379)	C	MIR	SINE/MIR	(13)	249	80	1577452
202	13.9	0.0	0.0	chr17	17849371	17849406	(65408035)	+	L2b	LINE/L2	3313	3348	(27)	1577457
1762	13.5	3.1	2.4	chr17	18181962	18182250	(65075191)	+	AluJb	SINE/Alu	1	291	(21)	1578109
284	29.3	6.5	0.8	chr17	18260082	18260198	(64997243)	C	MIRc	SINE/MIR	(81)	187	64	1578239
2016	0.5	0.0	0.0	chr17	19063920	19064136	(64193305)	C	U3	snRNA	(0)	217	1	1579728
316	24.5	19.4	4.4	chr17	19255181	19255428	(64002013)	+	L4_A_Mam	LINE/RTE-X	4610	4903	(87)	1580288
54	0.0	0.0	1.9	chr17	19255431	19255483	(64001958)	+	(ATTT)n	Simple_repeat	1	53	(0)	1580289
218	22.4	0.0	7.5	chr17	19255511	19255563	(64001878)	+	MER5B	DNA/hAT-Charlie	1	49	(129)	1580290
17	0.0	0.0	0.0	chr17	19255564	19255582	(64001859)	+	(T)n	Simple_repeat	1	19	(0)	1580291
13	12.1	0.0	3.5	chr17	20009436	20009464	(63247977)	+	(CCGC)n	Simple_repeat	1	29	(0)	1581768
5174	18.9	2.9	1.5	chr17	20943981	20945044	(62312397)	C	L1M1	LINE/L1	(5799)	1766	16	1583365
453	21.4	15.9	4.4	chr17	21043779	21043983	(62213458)	C	Charlie5	DNA/hAT-Charlie	(24)	2600	2368	1583518
1821	12.8	6.8	0.0	chr17	21203435	21203723	(62053718)	+	AluSz	SINE/Alu	1	310	(2)	1583836
13	33.8	2.4	2.4	chr17	28727120	28727201	(54530240)	+	G-rich	Low_complexity	1	84	(0)	1589204
17	25.1	0.0	4.8	chr17	28897639	28897700	(54359741)	+	(CGCC)n	Simple_repeat	1	62	(0)	1589579
18	18.9	3.5	3.3	chr17	29293713	29293774	(53963667)	+	(CCCCATC)n	Simple_repeat	1	62	(0)	1590287
41	32.5	0.0	0.0	chr17	29293893	29294029	(53963412)	+	(TGG)n	Simple_repeat	1	137	(0)	1590288
12	17.2	8.3	1.9	chr17	29390529	29390576	(53866865)	+	(CCGGCCG)n	Simple_repeat	1	52	(0)	1590555
49	0.0	0.0	0.0	chr17	29744861	29744902	(53512539)	+	(GT)n	Simple_repeat	1	42	(0)	1591253
590	27.9	3.4	5.5	chr17	29829151	29829332	(53428109)	C	MIRb	SINE/MIR	(2)	266	89	1591442
2367	9.3	0.3	0.3	chr17	30283519	30283819	(52973622)	C	AluSc	SINE/Alu	(8)	301	1	1592272
849	22.1	1.3	3.4	chr17	30458237	30458470	(52798971)	C	L1MB4	LINE/L1	(878)	5268	5040	1592599
1283	17.9	3.5	3.8	chr17	30458554	30458584	(52798857)	C	L1MB4	LINE/L1	(1088)	5058	5029	1592599
2030	14.5	0.7	0.3	chr17	30458585	30458888	(52798553)	+	AluSz	SINE/Alu	1	305	(7)	1592602
2832	22.8	3.4	2.1	chr17	31111098	31111877	(52145564)	+	L1MEg	LINE/L1	2285	3045	(4505)	1594027
12	17.5	3.1	0.0	chr17	32298929	32298960	(50958481)	+	(GAGGT)n	Simple_repeat	1	33	(0)	1596495
16	0.0	0.0	0.0	chr17	32299047	32299063	(50958378)	+	(T)n	Simple_repeat	1	17	(0)	1596496
702	25.6	10.6	0.5	chr17	34982003	34982214	(48275227)	C	MIR	SINE/MIR	(0)	262	27	1601464
313	26.6	2.2	9.4	chr17	35126222	35126426	(48131015)	C	Charlie7a	DNA/hAT-Charlie	(77)	195	8	1601756
252	30.9	1.4	8.0	chr17	35126448	35126497	(48130944)	+	MER5A1	DNA/hAT-Charlie	4	50	(116)	1601758
2143	11.9	0.3	0.0	chr17	35126498	35126799	(48130642)	C	AluSg	SINE/Alu	(7)	303	1	1601759
894	27.0	8.5	9.6	chr17	35253998	35254448	(48002993)	C	HAL1	LINE/L1	(291)	2216	1753	1601995
2209	8.2	0.7	0.0	chr17	35567234	35567514	(47689927)	+	AluSx1	SINE/Alu	1	283	(29)	1602409
47	0.0	0.0	0.0	chr17	35567518	35567560	(47689881)	+	(AAAT)n	Simple_repeat	1	43	(0)	1602410
1206	12.3	0.0	0.6	chr17	35567561	35567731	(47689710)	+	AluSx	SINE/Alu	133	302	(10)	1602411
1675	14.5	4.9	3.5	chr17	35744219	35744501	(47512940)	+	AluJr	SINE/Alu	10	296	(16)	1602710
202	22.2	3.1	4.5	chr17	36885544	36885609	(46371832)	+	MIRb	SINE/MIR	165	229	(39)	1604869
325	24.8	10.4	3.7	chr17	36885691	36885824	(46371617)	C	MIR3	SINE/MIR	(43)	165	22	1604871
13	15.7	2.6	5.0	chr17	36936596	36936634	(46320807)	+	(CCG)n	Simple_repeat	1	40	(0)	1604970
928	32.1	4.6	2.7	chr17	37273401	37273806	(45983635)	+	LTR79	LTR/ERVL	41	454	(73)	1605482
14	23.9	0.0	2.2	chr17	37406615	37406660	(45850781)	+	(GCGCCAC)n	Simple_repeat	1	46	(0)	1605791
34	12.8	0.0	0.0	chr17	38601622	38601682	(44655759)	+	(AC)n	Simple_repeat	1	61	(0)	1608156
2219	10.5	0.0	0.3	chr17	38666956	38667240	(44590201)	+	AluSz	SINE/Alu	1	284	(28)	1608314
56	0.0	0.0	0.0	chr17	38667241	38667290	(44590151)	+	(AAAT)n	Simple_repeat	1	50	(0)	1608315
468	25.2	5.0	5.6	chr17	38667291	38667392	(44590049)	+	MIR	SINE/MIR	155	260	(2)	1608313
546	23.5	14.5	0.7	chr17	38667413	38667566	(44589875)	+	MIRb	SINE/MIR	43	221	(47)	1608316
14	23.1	0.0	0.0	chr17	38675119	38675154	(44582287)	+	G-rich	Low_complexity	1	36	(0)	1608326
181	31.4	3.8	4.7	chr17	38675218	38675324	(44582117)	+	MIRc	SINE/MIR	101	206	(62)	1608327
19	21.9	4.2	2.7	chr17	38702481	38702552	(44554889)	+	G-rich	Low_complexity	1	75	(0)	1608406
416	30.3	8.4	0.7	chr17	38702582	38702734	(44554707)	C	MIRb	SINE/MIR	(19)	249	84	1608407
537	32.5	0.6	1.2	chr17	38703068	38703238	(44554203)	+	MIRb	SINE/MIR	50	219	(49)	1608408
2227	12.3	0.0	1.3	chr17	38864070	38864385	(44393056)	C	AluSq	SINE/Alu	(0)	313	2	1608763
1951	13.9	0.4	0.0	chr17	38864387	38864698	(44392743)	C	AluSx	SINE/Alu	(0)	312	1	1608764
393	28.8	5.0	1.8	chr17	39062908	39063081	(44194360)	C	MIR3	SINE/MIR	(36)	172	4	1609229
13	22.7	2.3	2.3	chr17	39401721	39401763	(43855678)	+	(GGC)n	Simple_repeat	1	44	(0)	1610001
930	24.9	5.1	0.8	chr17	39557799	39558041	(43699400)	+	MIR	SINE/MIR	3	256	(6)	1610358
188	14.7	8.1	0.0	chr17	39730076	39730109	(43527332)	C	MIRb	SINE/MIR	(28)	240	204	1610670
13	21.9	0.0	2.6	chr17	39980927	39980965	(43276476)	+	(GGCCCC)n	Simple_repeat	1	39	(0)	1611119
13	4.1	8.0	0.0	chr17	39980983	39981007	(43276434)	+	(GGCGC)n	Simple_repeat	1	27	(0)	1611120
16	10.7	7.1	2.2	chr17	39981111	39981152	(43276289)	+	(GACGGCA)n	Simple_repeat	1	45	(0)	1611121
16	23.6	0.0	0.0	chr17	40069008	40069042	(43188399)	+	(GT)n	Simple_repeat	1	35	(0)	1611299
96	24.6	2.0	0.0	chr17	40069072	40069316	(43188125)	+	(CTCT)n	Simple_repeat	1	250	(0)	1611300
20	13.3	0.0	4.4	chr17	40111892	40111936	(43145505)	+	(TCTCCC)n	Simple_repeat	1	45	(0)	1611366
232	33.8	0.0	0.0	chr17	40111947	40112017	(43145424)	C	MER131	DNA?	(139)	76	6	1611367
106	1.8	3.5	0.0	chr17	40140318	40140430	(43117011)	+	(AC)n	Simple_repeat	1	117	(0)	1611417
18	19.4	0.0	0.0	chr17	40140646	40140686	(43116755)	+	(GCGGCA)n	Simple_repeat	1	41	(0)	1611418
17	11.2	0.0	8.7	chr17	40140786	40140838	(43116603)	+	(GGCGG)n	Simple_repeat	1	48	(0)	1611419
68	0.0	0.0	0.0	chr17	40194233	40194290	(43063151)	+	(GT)n	Simple_repeat	1	58	(0)	1611535
216	27.0	0.0	3.1	chr17	40307917	40307981	(42949460)	C	MIR1_Amn	SINE/MIR	(79)	151	89	1611812
23	5.5	5.3	0.0	chr17	40423407	40423444	(42833997)	+	(TTTA)n	Simple_repeat	1	40	(0)	1612011
221	39.2	7.2	2.1	chr17	40827957	40828193	(42429248)	+	L2b	LINE/L2	2563	2812	(607)	1612718
342	26.0	1.5	0.0	chr17	40828333	40828419	(42429022)	+	MIR	SINE/MIR	66	153	(109)	1612719
551	15.5	4.8	2.0	chr17	41632551	41633816	(41623625)	+	(GT)n	Simple_repeat	1	1327	(0)	1613928
13	14.8	2.4	4.8	chr17	41651781	41651821	(41605620)	+	(CCCAGCG)n	Simple_repeat	1	42	(0)	1613960
156	23.5	2.0	2.4	chr17	41651910	41652352	(41605089)	+	(AC)n	Simple_repeat	1	452	(0)	1613961
22	14.9	0.0	0.0	chr17	41865834	41865870	(41391571)	+	(T)n	Simple_repeat	1	37	(0)	1614464
423	30.2	4.8	1.6	chr17	41930142	41930323	(41327118)	C	MIRc	SINE/MIR	(58)	210	20	1614595
404	31.9	9.3	2.7	chr17	42045926	42046305	(41211136)	+	L2b	LINE/L2	2975	3375	(0)	1614832
1422	14.6	1.0	8.9	chr17	42255549	42255808	(41001633)	+	L1MB3	LINE/L1	5891	6132	(51)	1615243
28	0.0	0.0	0.0	chr17	42527992	42528018	(40729423)	+	(AAAT)n	Simple_repeat	1	27	(0)	1615819
1492	17.2	0.0	0.0	chr17	42528124	42528355	(40729086)	C	AluJb	SINE/Alu	(41)	271	40	1615820
469	6.1	1.5	0.0	chr17	42530807	42530872	(40726569)	+	Alu	SINE/Alu	231	297	(14)	1615829
1307	19.4	0.4	1.3	chr17	42530995	42531226	(40726215)	C	AluJb	SINE/Alu	(40)	272	43	1615830
13	33.2	0.0	1.8	chr17	42676646	42676701	(40580740)	+	GA-rich	Low_complexity	1	56	(0)	1616131
21	8.3	7.9	0.0	chr17	43367817	43367854	(39889587)	+	(AC)n	Simple_repeat	1	41	(0)	1617634
680	25.3	1.7	0.6	chr17	43367908	43368082	(39889359)	C	U2	snRNA	(6)	182	6	1617635
381	30.2	6.5	11.8	chr17	43388857	43389213	(39868228)	+	L2c	LINE/L2	3050	3386	(1)	1617686
54	0.0	0.0	0.0	chr17	43545935	43545980	(39711461)	+	(GT)n	Simple_repeat	1	46	(0)	1618071
19	9.4	2.9	0.0	chr17	43579339	43579372	(39678069)	+	(TGA)n	Simple_repeat	1	35	(0)	1618148
549	22.0	2.2	2.9	chr17	43943763	43943898	(39313543)	+	MIRb	SINE/MIR	34	168	(100)	1618894
25	24.9	2.9	3.8	chr17	45148492	45148593	(38108848)	+	GA-rich	Low_complexity	1	105	(0)	1621434
14	16.4	2.9	0.0	chr17	45148579	45148612	(38108829)	+	(GAGCA)n	Simple_repeat	1	35	(0)	1621435
2352	9.7	0.0	0.3	chr17	45158742	45159041	(38098400)	C	AluSc	SINE/Alu	(10)	299	1	1621459
53	15.0	4.5	0.0	chr17	45197575	45197685	(38059756)	+	GA-rich	Low_complexity	1	116	(0)	1621570
12	12.5	0.0	3.6	chr17	45247760	45247787	(38009654)	+	(CCCCT)n	Simple_repeat	1	28	(0)	1621665
2187	11.3	0.0	0.3	chr17	45258645	45258935	(37998506)	C	AluSz	SINE/Alu	(22)	290	1	1621680
13	0.0	5.0	0.0	chr17	45334348	45334367	(37923074)	+	(TCC)n	Simple_repeat	1	21	(0)	1621828
387	23.1	11.5	9.6	chr17	45334410	45334596	(37922845)	C	L2b	LINE/L2	(0)	3387	3197	1621829
6357	26.6	6.9	7.0	chr17	47065564	47068369	(36189072)	C	HERVIP10FH-int	LTR/ERV1	(259)	4843	2041	1625273
16	15.2	0.0	7.8	chr17	47821812	47821862	(35435579)	+	(CTCCCCT)n	Simple_repeat	1	51	(0)	1626785
15	14.9	2.6	2.5	chr17	48101118	48101156	(35156285)	+	G-rich	Low_complexity	1	40	(0)	1627294
17	10.5	3.2	0.0	chr17	48101208	48101238	(35156203)	+	(CCG)n	Simple_repeat	1	32	(0)	1627295
192	7.4	0.0	0.0	chr17	48163591	48163617	(35093824)	+	MIR3	SINE/MIR	34	60	(148)	1627411
350	31.5	7.2	4.0	chr17	48406996	48407364	(34850077)	+	L1M6	LINE/L1	3030	3415	(2985)	1627780
992	5.0	0.0	0.8	chr17	48493798	48493916	(34763525)	C	AluSg7	SINE/Alu	(188)	121	4	1627979
1344	11.1	0.0	0.0	chr17	48493917	48494096	(34763345)	+	AluSx	SINE/Alu	133	312	(0)	1627980
818	14.7	0.0	0.0	chr17	48497178	48497293	(34760148)	C	AluJb	SINE/Alu	(196)	116	1	1627990
16	28.3	0.0	0.0	chr17	48548322	48548372	(34709069)	+	(TTTTT)n	Simple_repeat	1	51	(0)	1628083
25	7.9	2.5	0.0	chr17	48577529	48577568	(34679873)	+	(CCT)n	Simple_repeat	1	41	(0)	1628112
2238	9.5	0.3	0.0	chr17	48650580	48650862	(34606579)	+	AluSq2	SINE/Alu	1	284	(29)	1628186
48	0.0	0.0	0.0	chr17	48650863	48650906	(34606535)	+	(AAAT)n	Simple_repeat	1	44	(0)	1628187
3977	16.3	2.3	4.7	chr17	48650907	48651141	(34606300)	C	L1MB2	LINE/L1	(533)	5638	5413	1628185
94	7.2	4.1	0.0	chr17	48728854	48728999	(34528442)	+	(TC)n	Simple_repeat	1	152	(0)	1628367
12	24.0	4.5	0.0	chr17	48729085	48729128	(34528313)	+	GA-rich	Low_complexity	1	46	(0)	1628368
1246	10.1	2.2	1.7	chr17	49368209	49368387	(33889054)	+	AluSq	SINE/Alu	106	285	(28)	1629798
51	0.0	0.0	0.0	chr17	49368390	49368435	(33889006)	+	(ATAA)n	Simple_repeat	1	46	(0)	1629799
628	27.2	14.4	2.9	chr17	49565951	49566367	(33691074)	C	L2c	LINE/L2	(0)	3387	2915	1630170
2316	7.5	0.0	0.0	chr17	49569710	49570014	(33687427)	C	AluSx	SINE/Alu	(7)	305	1	1630179
554	24.7	10.3	4.2	chr17	49708479	49708668	(33548773)	+	MIRc	SINE/MIR	61	263	(5)	1630437
16	18.5	0.0	6.1	chr17	50345987	50346035	(32911406)	+	(GGCCC)n	Simple_repeat	1	49	(0)	1631618
333	31.8	17.4	0.4	chr17	50372550	50372811	(32884630)	+	L2a	LINE/L2	3111	3426	(0)	1631650
2050	14.8	0.7	0.0	chr17	50411247	50411551	(32845890)	C	AluSz	SINE/Alu	(5)	307	1	1631727
795	18.3	27.3	1.4	chr17	50411572	50411782	(32845659)	C	AluJb	SINE/Alu	(16)	286	1	1631728
895	27.7	6.7	12.5	chr17	50493552	50493731	(32763710)	C	MLT1J	LTR/ERVL-MaLR	(360)	152	2	1631901
17	16.2	2.7	2.6	chr17	50493763	50493780	(32763661)	+	(AT)n	Simple_repeat	1	18	(0)	1631903
2676	16.0	3.7	0.5	chr17	50493781	50494226	(32763215)	+	MER65C	LTR/ERV1	1	461	(0)	1631904
189	29.7	8.4	15.6	chr17	50547442	50547788	(32709653)	+	L2c	LINE/L2	3056	3387	(0)	1632014
18	8.3	5.0	2.4	chr17	50944395	50944434	(32313007)	+	G-rich	Low_complexity	1	42	(0)	1632789
489	25.6	12.2	3.4	chr17	51121167	51121344	(32136097)	C	MIRc	SINE/MIR	(18)	250	55	1633163
858	16.4	3.8	1.7	chr17	51121494	51121673	(32135768)	+	L1MB8	LINE/L1	5995	6178	(0)	1633164
384	32.7	11.8	3.6	chr17	51639997	51640221	(31617220)	+	L2b	LINE/L2	3130	3375	(0)	1634141
315	29.4	8.1	0.0	chr17	57407483	57407584	(25849857)	+	AmnSINE2	SINE/tRNA-Deu	111	221	(137)	1643220
336	26.0	3.7	3.7	chr17	57823961	57824068	(25433373)	+	MER91C	DNA/hAT-Tip100	33	140	(0)	1643910
200	22.2	2.2	0.0	chr17	57824081	57824125	(25433316)	+	MIR	SINE/MIR	15	60	(202)	1643911
278	32.3	3.1	0.0	chr17	57824135	57824227	(25433214)	+	MIRb	SINE/MIR	150	245	(23)	1643911
2398	8.6	1.6	0.0	chr17	57824414	57824716	(25432725)	+	AluSc5	SINE/Alu	1	308	(1)	1643912
45	0.0	2.4	0.0	chr17	57851671	57851712	(25405729)	+	(CA)n	Simple_repeat	1	43	(0)	1643968
231	32.9	10.4	3.3	chr17	57975056	57975206	(25282235)	+	MIRb	SINE/MIR	28	190	(78)	1644220
226	33.1	1.3	3.3	chr17	58413152	58413304	(24844137)	+	CR1_Mam	LINE/CR1	1133	1282	(922)	1644947
725	21.4	11.5	2.0	chr17	58631641	58631836	(24625605)	C	U3	snRNA	(0)	217	1	1645373
886	18.4	0.6	1.2	chr17	58679526	58679690	(24577751)	C	U1	snRNA	(1)	164	1	1645511
292	31.7	1.1	4.7	chr17	59107090	59107281	(24150160)	C	MER5A	DNA/hAT-Charlie	(4)	185	1	1646446
2383	4.6	0.4	0.7	chr17	59209539	59209839	(24047602)	C	AluSq2	SINE/Alu	(0)	313	9	1646700
18	14.9	0.0	0.0	chr17	59209850	59209880	(24047561)	+	(T)n	Simple_repeat	1	31	(0)	1646701
2101	11.3	2.8	0.3	chr17	60453201	60453484	(22803957)	C	AluSz	SINE/Alu	(21)	291	1	1649289
1881	16.7	1.3	0.3	chr17	60453537	60453835	(22803606)	C	AluJb	SINE/Alu	(10)	302	1	1649290
11335	8.8	4.3	2.0	chr17	60613441	60614980	(22642461)	+	LTR12C	LTR/ERV1	3	1579	(0)	1649657
2137	13.1	0.0	0.0	chr17	61493952	61494248	(21763193)	C	AluSx	SINE/Alu	(15)	297	1	1651136
261	23.2	6.7	7.7	chr17	61494249	61494299	(21763142)	+	Charlie7a	DNA/hAT-Charlie	224	270	(2)	1651135
285	30.9	4.3	4.3	chr17	61494480	61494594	(21762847)	+	MIRb	SINE/MIR	110	224	(44)	1651137
1662	13.3	9.6	3.9	chr17	62470549	62470833	(20786608)	C	AluJr4	SINE/Alu	(9)	303	1	1653055
181	31.1	5.1	2.6	chr17	62470836	62470911	(20786530)	+	L2c	LINE/L2	3279	3356	(31)	1653056
12	11.6	6.9	0.0	chr17	62470916	62470944	(20786497)	+	G-rich	Low_complexity	1	31	(0)	1653057
1620	6.7	8.4	2.2	chr17	63433051	63433273	(19824168)	C	AluY	SINE/Alu	(10)	301	64	1654707
2391	6.7	1.0	0.3	chr17	63843361	63843659	(19413782)	+	AluSq2	SINE/Alu	9	309	(4)	1655442
20	10.0	0.0	0.0	chr17	64129987	64130018	(19127423)	+	(GCA)n	Simple_repeat	1	32	(0)	1655959
2421	6.5	0.0	0.0	chr17	64263858	64264147	(18993294)	C	AluSc	SINE/Alu	(19)	290	1	1656175
326	20.7	3.5	3.5	chr17	64264159	64264243	(18993198)	C	MIR3	SINE/MIR	(35)	173	89	1656176
1932	12.3	0.0	9.1	chr17	64607689	64607996	(18649445)	+	AluSz	SINE/Alu	1	280	(32)	1656893
56	0.0	0.0	0.0	chr17	64607997	64608046	(18649395)	+	(ATAA)n	Simple_repeat	1	50	(0)	1656894
50	23.1	0.8	0.8	chr17	65100533	65100655	(18156786)	+	(TCC)n	Simple_repeat	1	124	(0)	1657971
1239	15.9	0.9	3.1	chr17	66270005	66270231	(16987210)	C	L1MB3	LINE/L1	(43)	6140	5919	1659989
2005	13.2	3.0	0.9	chr17	66270404	66270723	(16986718)	C	L1MB3	LINE/L1	(247)	5936	5610	1659989
467	32.4	6.8	0.0	chr17	66968021	66968224	(16289217)	C	MIRb	SINE/MIR	(46)	222	4	1661146
304	27.8	8.9	8.0	chr17	67585137	67585338	(15672103)	C	L2a	LINE/L2	(85)	3341	3091	1662329
1704	18.7	4.3	6.3	chr17	67585349	67585520	(15671921)	+	MLT1B	LTR/ERVL-MaLR	16	189	(201)	1662331
1911	16.0	0.0	0.7	chr17	67585521	67585813	(15671628)	+	AluSz6	SINE/Alu	1	291	(21)	1662332
36	31.8	0.0	0.8	chr17	67826114	67826239	(15431202)	+	GA-rich	Low_complexity	1	126	(0)	1662903
12	5.5	0.0	0.0	chr17	67826262	67826280	(15431161)	+	(GAC)n	Simple_repeat	1	19	(0)	1662904
1298	19.6	3.0	18.5	chr17	68029459	68029652	(15227789)	C	MSTB	LTR/ERVL-MaLR	(242)	184	1	1663367
1010	28.9	10.8	2.4	chr17	68029653	68029967	(15227474)	C	ERVL-E-int	LTR/ERVL	(2008)	3659	3300	1663366
24	20.3	0.9	9.2	chr17	68205304	68205411	(15052030)	+	(CGCGCCC)n	Simple_repeat	1	109	(0)	1663741
29	5.8	0.0	0.0	chr17	68205729	68205764	(15051677)	+	(GCCCCG)n	Simple_repeat	1	36	(0)	1663742
704	21.5	10.9	0.5	chr17	68510231	68510426	(14747015)	+	MIR	SINE/MIR	43	261	(1)	1664334
244	26.9	14.7	0.0	chr17	68510465	68510557	(14746884)	C	MIRb	SINE/MIR	(121)	147	39	1664335
23	7.2	0.0	0.0	chr17	71181092	71181121	(12076320)	+	(AC)n	Simple_repeat	1	30	(0)	1668392
856	23.1	11.1	0.5	chr17	71869435	71869643	(11387798)	C	MIR	SINE/MIR	(0)	262	29	1669442
13	20.8	4.3	2.1	chr17	72121831	72121876	(11135565)	+	(CGG)n	Simple_repeat	1	48	(0)	1669836
395	28.7	0.0	15.7	chr17	72370740	72370892	(10886549)	C	MIRc	SINE/MIR	(121)	147	14	1670274
13	12.1	0.0	3.5	chr17	72371118	72371146	(10886295)	+	(CCAC)n	Simple_repeat	1	29	(0)	1670276
627	23.1	1.4	0.7	chr17	72986572	72986715	(10270726)	+	MER5A1	DNA/hAT-Charlie	21	165	(1)	1671373
804	9.9	0.0	0.0	chr17	72986744	72986844	(10270597)	+	AluSz	SINE/Alu	1	101	(211)	1671374
251	32.7	2.9	0.0	chr17	73099558	73099658	(10157783)	C	L2a	LINE/L2	(1)	3425	3322	1671624
253	28.0	7.1	9.5	chr17	73099732	73099889	(10157552)	+	MIRc	SINE/MIR	115	268	(0)	1671625
638	29.8	14.2	2.6	chr17	73099923	73100100	(10157341)	+	L2a	LINE/L2	2638	2821	(598)	1671626
2104	11.9	0.3	2.0	chr17	73186979	73187281	(10070160)	C	AluSx1	SINE/Alu	(14)	298	1	1671818
594	28.8	9.8	5.6	chr17	73187282	73187363	(10070078)	C	L2a	LINE/L2	(1009)	2410	2327	1671806
228	22.0	0.0	0.0	chr17	73187525	73187574	(10069867)	C	LSU-rRNA_Hsa	rRNA	(399)	4636	4587	1671819
1957	14.2	4.6	0.0	chr17	73277968	73278255	(9979186)	C	AluSx1	SINE/Alu	(10)	302	1	1671985
873	29.7	6.6	3.4	chr17	73278256	73278526	(9978915)	+	L4_A_Mam	LINE/RTE-X	4701	4981	(9)	1671984
60	0.0	0.0	0.0	chr17	73310744	73310794	(9946647)	+	(CA)n	Simple_repeat	1	51	(0)	1672050
1179	20.8	2.3	1.4	chr17	74404840	74405058	(8852383)	C	MER58A	DNA/hAT-Charlie	(0)	224	4	1674090
58	30.2	1.8	9.6	chr17	74514143	74514815	(8742626)	+	(TGACAGG)n	Simple_repeat	1	685	(0)	1674300
444	26.3	17.1	1.7	chr17	75012148	75012383	(8245058)	C	L2a	LINE/L2	(4)	3422	3143	1675179
1942	7.1	0.7	4.8	chr17	75035539	75035832	(8221609)	+	AluSx3	SINE/Alu	1	282	(29)	1675216
29	0.0	3.2	0.0	chr17	75035833	75035863	(8221578)	+	(AAAC)n	Simple_repeat	1	32	(0)	1675217
1801	7.2	0.3	18.4	chr17	75036046	75036420	(8221021)	C	AluY	SINE/Alu	(4)	307	1	1675218
2044	7.1	10.1	0.0	chr17	75092359	75092624	(8164817)	C	AluSc	SINE/Alu	(13)	296	1	1675333
116	29.6	0.5	1.3	chr17	75092625	75092860	(8164581)	+	(GT)n	Simple_repeat	1	234	(0)	1675334
242	26.9	16.6	3.7	chr17	75189425	75189586	(8067855)	C	MIR	SINE/MIR	(6)	256	70	1675567
2395	8.8	0.0	1.3	chr17	75189635	75189942	(8067499)	+	AluSx1	SINE/Alu	1	304	(8)	1675568
2243	10.2	0.0	0.0	chr17	75204553	75204846	(8052595)	C	AluSx1	SINE/Alu	(17)	295	2	1675624
2218	11.3	0.0	0.3	chr17	75204850	75205149	(8052292)	C	AluSx1	SINE/Alu	(13)	299	1	1675625
194	30.8	11.7	1.1	chr17	75262043	75262134	(7995307)	+	MIRc	SINE/MIR	3	105	(163)	1675711
210	33.1	6.3	4.3	chr17	76439707	76439845	(6817596)	+	L2c	LINE/L2	3025	3166	(221)	1678031
341	28.3	18.8	0.0	chr17	76439973	76440145	(6817296)	C	L2a	LINE/L2	(6)	3420	3208	1678032
461	28.0	3.6	2.6	chr17	76668129	76668319	(6589122)	+	LTR16A	LTR/ERVL	258	450	(1)	1678516
2113	11.5	3.3	0.3	chr17	76668369	76668663	(6588778)	+	AluSz	SINE/Alu	2	305	(7)	1678517
30	0.0	0.0	0.0	chr17	76671394	76671419	(6586022)	+	(GT)n	Simple_repeat	1	26	(0)	1678522
202	29.4	8.6	1.2	chr17	76671539	76671624	(6585817)	+	L2c	LINE/L2	3294	3386	(1)	1678523
2369	9.1	0.0	2.5	chr17	77289077	77289395	(5968046)	C	AluSx	SINE/Alu	(0)	312	2	1679809
1397	23.4	6.0	5.1	chr17	77331941	77331993	(5925448)	C	L1ME2z	LINE/L1	(2)	6442	6389	1679889
1024	4.7	7.2	0.0	chr17	78254012	78254140	(5003301)	C	MER85	DNA/PiggyBac	(0)	139	1	1681497
329	20.9	16.8	3.5	chr17	78314618	78314786	(4942655)	C	Charlie7a	DNA/hAT-Charlie	(72)	200	5	1681634
14	12.7	0.0	0.0	chr17	78378668	78378693	(4878748)	+	(GGC)n	Simple_repeat	1	26	(0)	1681762
15	14.4	0.0	0.0	chr17	79778793	79778816	(3478625)	+	(T)n	Simple_repeat	1	24	(0)	1683940
18	18.8	2.0	2.0	chr17	79810553	79810602	(3446839)	+	(CCGCTC)n	Simple_repeat	1	51	(0)	1683966
44	7.6	0.0	0.0	chr17	79810659	79810714	(3446727)	+	(TG)n	Simple_repeat	1	56	(0)	1683967
32	28.6	0.8	3.2	chr17	79839588	79839712	(3417729)	+	G-rich	Low_complexity	1	126	(0)	1684014
1581	18.9	5.4	1.1	chr17	80033374	80033658	(3223783)	C	AluJb	SINE/Alu	(14)	298	1	1684334
558	27.6	4.7	0.6	chr17	80033959	80034122	(3223319)	+	MIR	SINE/MIR	32	202	(60)	1684335
484	30.9	8.3	0.0	chr17	80196307	80196539	(3060902)	C	Charlie13b	DNA/hAT-Charlie	(31)	481	228	1684640
627	27.8	6.9	11.0	chr17	80219187	80219390	(3038051)	+	MLT1A	LTR/ERVL-MaLR	156	348	(26)	1684677
971	21.0	21.6	1.1	chr17	80453963	80454450	(2802991)	C	L2a	LINE/L2	(327)	3099	2481	1685037
235	27.3	0.5	0.0	chr17	80980487	80981089	(2276352)	+	(GAGT)n	Simple_repeat	1	606	(0)	1685730
12	18.1	0.0	3.0	chr17	80981125	80981157	(2276284)	+	(CCGCCC)n	Simple_repeat	1	33	(0)	1685731
712	15.6	0.0	0.0	chr17	81589732	81589840	(1667601)	+	AluJo	SINE/Alu	17	125	(187)	1686438
2624	3.4	0.0	0.0	chr17	81623517	81623813	(1633628)	+	AluY	SINE/Alu	1	297	(14)	1686510
387	31.9	10.4	17.5	chr17	81623858	81624002	(1633439)	C	L2b	LINE/L2	(21)	3405	3284	1686511
2117	14.4	0.3	1.6	chr17	81624003	81624138	(1633303)	+	AluSz	SINE/Alu	1	136	(176)	1686512
2326	11.3	0.3	0.0	chr17	81624139	81624448	(1632993)	+	AluSq4	SINE/Alu	1	311	(0)	1686513
13	19.4	4.9	0.0	chr17	82065901	82065941	(1191500)	+	(AGAGGTC)n	Simple_repeat	1	43	(0)	1687090
13	0.0	0.0	0.0	chr17	82458441	82458457	(798984)	+	(GCC)n	Simple_repeat	1	17	(0)	1687667
571	17.9	0.0	1.7	chr17	82543243	82543359	(714082)	C	AluJo	SINE/Alu	(5)	307	193	1687852
2447	6.0	0.0	0.0	chr17	82543775	82544075	(713366)	C	AluY	SINE/Alu	(10)	301	1	1687854
1642	14.9	6.5	0.7	chr17	82544076	82544212	(713229)	C	AluJo	SINE/Alu	(177)	135	1	1687853
326	26.2	7.5	5.9	chr18	3409640	3409809	(76963476)	+	HAL1ME	LINE/L1	2273	2445	(20)	1694344
44	0.0	2.4	0.0	chr18	5629410	5629450	(74743835)	+	(AC)n	Simple_repeat	1	42	(0)	1697496
38	2.8	0.0	0.0	chr18	5630861	5630897	(74742388)	+	(AC)n	Simple_repeat	1	37	(0)	1697497
15	20.4	2.0	4.0	chr18	5943693	5943741	(74429544)	+	(GCA)n	Simple_repeat	1	50	(0)	1697910
90	32.7	0.0	0.7	chr18	6729310	6729597	(73643688)	+	(AC)n	Simple_repeat	1	288	(0)	1698977
4644	25.8	4.2	2.8	chr18	7220927	7221730	(73151555)	C	L1MA6	LINE/L1	(4983)	2582	1794	1699734
1823	15.2	5.1	0.0	chr18	8612660	8612954	(71760331)	C	AluJo	SINE/Alu	(1)	311	1	1701668
344	26.4	0.0	11.7	chr18	11741518	11741654	(68631631)	+	L2c	LINE/L2	3267	3387	(0)	1706271
1428	13.4	0.0	0.4	chr18	11741847	11742079	(68631206)	C	L1MB3	LINE/L1	(0)	6183	5952	1706272
182	30.9	9.3	5.3	chr18	12879315	12879447	(67493838)	+	L2	LINE/L2	1643	1781	(1638)	1708287
252	26.1	4.9	0.0	chr18	12879475	12879555	(67493730)	C	L2a	LINE/L2	(2)	3424	3290	1708288
18	9.4	0.0	5.3	chr18	12883964	12884001	(67489284)	+	(GCGAGAG)n	Simple_repeat	1	38	(0)	1708293
20	3.0	2.6	5.1	chr18	12884216	12884253	(67489032)	+	(GCGCTGC)n	Simple_repeat	1	39	(0)	1708294
15	19.1	5.9	3.7	chr18	12884254	12884266	(67489019)	+	(GC)n	Simple_repeat	1	54	(0)	1708295
581	31.9	14.8	3.5	chr18	13003476	13003631	(67369654)	C	L2a	LINE/L2	(305)	3121	2975	1708529
232	22.4	20.8	0.0	chr18	13003632	13003707	(67369578)	C	L2a	LINE/L2	(531)	2888	2793	1708529
734	14.1	0.0	0.0	chr18	13003708	13003806	(67369479)	+	AluJb	SINE/Alu	191	289	(23)	1708531
203	25.0	1.8	0.0	chr18	13003807	13003862	(67369423)	C	L2a	LINE/L2	(617)	2802	2746	1708529
21	23.5	0.0	0.0	chr18	13222287	13222331	(67150954)	+	(T)n	Simple_repeat	1	45	(0)	1708819
49	4.1	0.0	0.0	chr18	22493298	22493348	(57879937)	+	(AC)n	Simple_repeat	1	51	(0)	1714640
15	29.2	2.7	2.6	chr18	23135480	23135553	(57237732)	+	(AGCC)n	Simple_repeat	1	76	(0)	1715683
325	29.4	4.0	1.6	chr18	24052285	24052405	(56320880)	+	L2b	LINE/L2	3252	3375	(0)	1717276
687	28.4	2.6	2.1	chr18	27605638	27605831	(52767454)	+	MIRb	SINE/MIR	3	197	(71)	1722638
634	28.0	7.0	0.5	chr18	35616244	35616444	(44756841)	+	MIR	SINE/MIR	44	258	(4)	1733590
277	26.9	2.1	12.3	chr18	35617200	35617305	(44755980)	+	L2c	LINE/L2	3293	3387	(0)	1733592
12	14.4	6.2	0.0	chr18	35617912	35617943	(44755342)	+	(TTTCT)n	Simple_repeat	1	34	(0)	1733594
11	9.7	8.6	2.6	chr18	35618189	35618223	(44755062)	+	(ATCATT)n	Simple_repeat	1	38	(0)	1733595
2327	9.8	0.0	0.0	chr18	37300229	37300524	(43072761)	C	AluSx1	SINE/Alu	(16)	296	1	1735867
272	14.6	0.0	0.0	chr18	43381598	43381638	(36991647)	+	tRNA-Met_	tRNA	1	41	(35)	1744117
404	30.7	8.4	6.8	chr18	44946684	44946917	(35426368)	C	L2a	LINE/L2	(0)	3426	3189	1746185
552	21.5	21.2	0.0	chr18	48162330	48162492	(32210793)	+	MIR	SINE/MIR	56	262	(0)	1751436
48	0.0	0.0	0.0	chr18	48465290	48465333	(31907952)	+	(AAAT)n	Simple_repeat	1	44	(0)	1751965
23	22.3	0.0	1.7	chr18	50281424	50281482	(30091803)	+	(CCT)n	Simple_repeat	1	59	(0)	1754897
651	28.7	6.7	3.3	chr18	56881293	56881537	(23491748)	C	MIR	SINE/MIR	(7)	255	2	1764757
1794	14.1	8.3	0.0	chr18	56881609	56881884	(23491401)	C	AluSz	SINE/Alu	(10)	302	2	1764758
41	4.8	0.0	0.0	chr18	57434377	57434420	(22938865)	+	(GT)n	Simple_repeat	1	44	(0)	1765550
1485	13.0	15.3	0.0	chr18	57772968	57773221	(22600064)	+	AluSg	SINE/Alu	1	300	(10)	1766147
11	15.8	6.5	4.1	chr18	59899637	59899682	(20473603)	+	(CCACTC)n	Simple_repeat	1	49	(0)	1769752
17	3.2	0.0	10.3	chr18	59899887	59899925	(20473360)	+	(GCGGG)n	Simple_repeat	1	39	(0)	1769753
2252	13.3	0.0	0.3	chr18	59952601	59952909	(20420376)	C	AluSc	SINE/Alu	(0)	309	2	1769849
1009	0.0	0.0	0.0	chr19	1021522	1021628	(57595988)	+	U6	snRNA	1	107	(0)	1798081
2167	10.9	1.0	0.0	chr19	1021889	1022190	(57595426)	C	AluSx	SINE/Alu	(4)	308	4	1798082
211	24.1	0.0	6.9	chr19	1267426	1267483	(57350133)	+	L2c	LINE/L2	3334	3387	(0)	1798483
307	25.0	19.4	0.0	chr19	1445568	1445671	(57171945)	+	L2c	LINE/L2	3288	3423	(3)	1798791
186	35.1	0.0	0.0	chr19	1445693	1445769	(57171847)	+	L2b	LINE/L2	3297	3373	(2)	1798792
514	28.7	0.0	2.9	chr19	3710695	3710834	(54906782)	C	L2a	LINE/L2	(12)	3414	3279	1803836
2496	5.6	1.3	0.0	chr19	3710897	3711198	(54906418)	C	AluY	SINE/Alu	(5)	306	1	1803837
2314	9.5	1.0	0.0	chr19	3719454	3719757	(54897859)	+	AluSx1	SINE/Alu	1	307	(5)	1803871
384	27.6	8.8	1.9	chr19	3985775	3985933	(54631683)	+	L1MD2	LINE/L1	6178	6348	(11)	1804474
298	30.5	3.5	0.0	chr19	3985953	3986034	(54631582)	C	L2a	LINE/L2	(2)	3424	3340	1804475
365	31.7	8.4	1.2	chr19	3986054	3986219	(54631397)	+	MIR	SINE/MIR	81	259	(3)	1804476
254	28.6	0.0	6.1	chr19	3986241	3986322	(54631294)	C	MIRb	SINE/MIR	(2)	266	190	1804477
518	25.3	0.7	1.4	chr19	4000031	4000178	(54617438)	+	MER58B	DNA/hAT-Charlie	195	341	(0)	1804525
196	24.3	0.0	0.0	chr19	4000181	4000217	(54617399)	+	L2a	LINE/L2	3369	3405	(21)	1804526
1035	21.2	0.5	1.5	chr19	4000242	4000439	(54617177)	C	AluJb	SINE/Alu	(9)	303	108	1804527
251	28.4	0.8	0.3	chr19	4197343	4198009	(54419607)	+	(AATG)n	Simple_repeat	1	672	(0)	1805012
758	9.7	1.0	0.0	chr19	4204852	4204954	(54412662)	+	AluSx	SINE/Alu	33	136	(176)	1805024
194	20.0	0.0	0.0	chr19	4566830	4566864	(54050752)	C	MIRc	SINE/MIR	(120)	148	114	1805883
186	32.6	0.0	0.0	chr19	4566853	4566901	(54050715)	C	L3b	LINE/CR1	(12)	5220	5172	1805884
1056	12.8	0.7	0.0	chr19	4815489	4815637	(53801979)	C	AluJo	SINE/Alu	(77)	235	86	1806549
2229	9.0	0.0	0.7	chr19	4872411	4872724	(53744892)	C	AluY	SINE/Alu	(0)	311	1	1806733
1047	16.1	1.2	0.0	chr19	4907116	4907276	(53710340)	C	AluSx	SINE/Alu	(16)	296	134	1806847
2215	9.9	0.3	0.3	chr19	4907277	4907569	(53710047)	C	AluSx1	SINE/Alu	(19)	293	1	1806848
15	15.8	7.8	1.8	chr19	4909661	4909711	(53707905)	+	G-rich	Low_complexity	1	55	(0)	1806852
1898	17.5	0.0	0.3	chr19	4993608	4993899	(53623717)	C	AluJb	SINE/Alu	(9)	303	13	1807047
3142	16.5	9.2	5.0	chr19	4993900	4994031	(53623585)	C	L1M4	LINE/L1	(3773)	2373	2254	1807043
17	20.2	0.0	0.0	chr19	4994032	4994065	(53623551)	+	(T)n	Simple_repeat	1	34	(0)	1807048
1426	19.9	10.1	3.9	chr19	5042528	5042872	(53574744)	C	MSTA	LTR/ERVL-MaLR	(35)	393	15	1807128
1252	20.3	0.0	0.4	chr19	5042853	5043094	(53574522)	C	Tigger4b	DNA/TcMar-Tigger	(111)	250	10	1807130
355	18.6	9.5	0.0	chr19	5309205	5309290	(53308326)	+	MIRc	SINE/MIR	53	147	(121)	1807621
2192	10.4	0.3	0.0	chr19	5740000	5740306	(52877310)	+	AluSp	SINE/Alu	1	308	(5)	1808709
299	28.4	2.6	0.0	chr19	5943236	5943309	(52674307)	+	MIRc	SINE/MIR	164	239	(29)	1809161
452	22.8	10.6	0.0	chr19	5943390	5943516	(52674100)	C	MER58C	DNA/hAT-Charlie	(15)	200	59	1809162
735	24.4	2.4	10.8	chr19	6781271	6781609	(51836007)	C	L1ME4b	LINE/L1	(540)	352	44	1811136
1007	10.5	0.0	0.0	chr19	8040821	8040953	(50576663)	C	AluSx	SINE/Alu	(179)	133	1	1814246
2325	9.3	0.7	0.0	chr19	8041213	8041512	(50576104)	+	AluSg7	SINE/Alu	1	302	(7)	1814249
35	0.0	0.0	0.0	chr19	8240586	8240615	(50377001)	+	(GT)n	Simple_repeat	1	30	(0)	1814796
16	20.6	0.0	5.9	chr19	8367671	8367721	(50249895)	+	(CCTC)n	Simple_repeat	1	51	(0)	1815153
26	0.0	0.0	0.0	chr19	8367798	8367822	(50249794)	+	(TCAT)n	Simple_repeat	1	25	(0)	1815154
1294	8.5	0.0	3.4	chr19	8367834	8368010	(50249606)	C	AluSx1	SINE/Alu	(15)	297	127	1815155
13	15.8	2.7	2.6	chr19	9819587	9819623	(48797993)	+	(GGCGG)n	Simple_repeat	1	38	(0)	1818191
1819	12.6	1.8	0.4	chr19	10269202	10269471	(48348145)	C	AluSz	SINE/Alu	(36)	276	3	1819333
414	23.2	0.0	1.2	chr19	10269474	10269556	(48348060)	+	L2a	LINE/L2	3329	3410	(16)	1819330
241	27.5	1.4	0.0	chr19	10424876	10424944	(48192672)	C	MIR3	SINE/MIR	(95)	113	44	1819700
2313	8.6	1.9	0.7	chr19	10424945	10425247	(48192369)	+	AluSx	SINE/Alu	1	307	(5)	1819701
14	13.0	0.0	7.7	chr19	10654426	10654464	(47963152)	+	(CGG)n	Simple_repeat	1	39	(0)	1820366
12	22.0	4.8	0.0	chr19	10654506	10654547	(47963069)	+	(GCGCCC)n	Simple_repeat	1	44	(0)	1820367
12	5.5	0.0	0.0	chr19	10654716	10654734	(47962882)	+	(GGC)n	Simple_repeat	1	19	(0)	1820368
236	26.9	0.0	0.0	chr19	11344712	11344763	(47272853)	+	MER91A	DNA/hAT-Tip100	1	52	(144)	1822104
25	18.8	0.0	0.0	chr19	11344796	11344846	(47272770)	+	(CTCCC)n	Simple_repeat	1	51	(0)	1822105
2448	9.7	0.0	0.3	chr19	11344847	11345155	(47272461)	C	AluSx3	SINE/Alu	(3)	308	1	1822106
1295	21.2	7.8	1.7	chr19	11597922	11598250	(47019366)	C	MER57E3	LTR/ERV1	(1)	486	138	1822765
556	25.1	11.0	1.5	chr19	11799051	11799248	(46818368)	C	MER57E3	LTR/ERV1	(18)	469	251	1823146
1661	17.4	4.3	2.4	chr19	11799249	11799589	(46818027)	C	LTR24C	LTR/ERV1	(0)	635	288	1823147
1003	23.8	10.4	4.3	chr19	12965023	12965417	(45652199)	C	L2	LINE/L2	(537)	2882	2461	1825650
391	30.8	14.4	0.8	chr19	12965786	12965915	(45651701)	+	L2a	LINE/L2	3115	3268	(158)	1825651
2310	7.9	1.4	0.0	chr19	12966092	12966381	(45651235)	C	AluSp	SINE/Alu	(19)	294	1	1825653
1727	12.1	6.8	4.9	chr19	12966382	12966509	(45651107)	C	AluSz	SINE/Alu	(169)	143	1	1825652
391	30.8	14.4	0.8	chr19	12966510	12966630	(45650986)	+	L2a	LINE/L2	3269	3406	(20)	1825651
20	25.1	4.0	2.6	chr19	12995102	12995175	(45622441)	+	(TG)n	Simple_repeat	1	77	(0)	1825727
23	19.2	0.0	3.4	chr19	12995313	12995320	(45622296)	+	(GCGTGT)n	Simple_repeat	1	57	(0)	1825728
29	16.2	0.0	0.0	chr19	12995321	12995369	(45622247)	+	(GT)n	Simple_repeat	1	49	(0)	1825729
29	17.1	1.4	2.9	chr19	12995372	12995440	(45622176)	+	(CCGC)n	Simple_repeat	1	70	(0)	1825730
18	4.5	0.0	0.0	chr19	13026722	13026744	(45590872)	+	(CT)n	Simple_repeat	1	23	(0)	1825778
29	0.0	0.0	0.0	chr19	13026745	13026769	(45590847)	+	(TG)n	Simple_repeat	1	25	(0)	1825779
1869	15.9	0.3	3.2	chr19	14380629	14380943	(44236673)	C	AluJo	SINE/Alu	(6)	306	1	1829359
14	18.2	2.6	2.5	chr19	14518366	14518404	(44099212)	+	(CCG)n	Simple_repeat	1	40	(0)	1829698
1972	13.3	1.8	0.0	chr19	14555416	14555734	(44061882)	C	AluSz6	SINE/Alu	(0)	312	7	1829797
1936	14.0	0.0	6.2	chr19	14555735	14555885	(44061731)	C	AluSx1	SINE/Alu	(172)	140	1	1829796
204	27.8	0.0	0.0	chr19	16470549	16470602	(42147014)	C	MIRc	SINE/MIR	(5)	263	210	1833995
2323	11.5	0.0	1.3	chr19	16805859	16806172	(41811444)	C	AluSx1	SINE/Alu	(2)	310	1	1834844
47	0.0	0.0	0.0	chr19	17246433	17246472	(41371144)	+	(AC)n	Simple_repeat	1	40	(0)	1835834
382	32.4	9.2	0.0	chr19	17336833	17337039	(41280577)	C	L2b	LINE/L2	(158)	3217	2990	1836060
180	34.1	5.5	0.0	chr19	17337067	17337151	(41280465)	C	L3	LINE/CR1	(3010)	1089	1000	1836061
659	12.6	0.0	11.0	chr19	17419386	17419409	(41198207)	C	FLAM_A	SINE/Alu	(104)	38	20	1836291
997	7.9	0.0	0.0	chr19	17419595	17419721	(41197895)	C	AluSc	SINE/Alu	(182)	127	1	1836293
12	18.1	0.0	3.0	chr19	17605990	17606050	(41011566)	+	(GCCCC)n	Simple_repeat	1	59	(0)	1836812
244	36.4	7.2	2.9	chr19	17720321	17720705	(40896911)	C	L2b	LINE/L2	(1)	3374	2972	1837105
2026	14.6	0.0	4.1	chr19	17805965	17806280	(40811336)	C	AluSx1	SINE/Alu	(9)	303	1	1837322
1458	14.8	0.0	1.9	chr19	17806281	17806335	(40811281)	C	AluJo	SINE/Alu	(176)	136	82	1837321
320	22.1	4.2	0.0	chr19	17806349	17806416	(40811200)	+	L2b	LINE/L2	3297	3367	(20)	1837320
15	19.5	0.0	7.4	chr19	18109891	18109944	(40507672)	+	G-rich	Low_complexity	1	54	(0)	1838132
17	15.3	2.6	0.0	chr19	18203591	18203628	(40413988)	+	(CGCGCA)n	Simple_repeat	1	39	(0)	1838357
11	27.2	3.0	4.3	chr19	18203943	18204009	(40413607)	+	(TGGCGG)n	Simple_repeat	1	69	(0)	1838358
15	11.2	3.5	0.0	chr19	18203982	18204010	(40413606)	+	(GGC)n	Simple_repeat	1	30	(0)	1838359
1006	22.9	2.8	9.7	chr19	18323760	18324061	(40293555)	C	MLT1C	LTR/ERVL-MaLR	(2)	465	169	1838619
1886	15.4	2.7	1.4	chr19	18356465	18356756	(40260860)	+	AluJo	SINE/Alu	1	296	(16)	1838709
2194	11.4	0.3	0.0	chr19	18356757	18357053	(40260563)	+	AluSx	SINE/Alu	1	298	(14)	1838710
306	35.6	5.7	0.6	chr19	18416486	18416841	(40200775)	+	L2c	LINE/L2	2798	3187	(188)	1838866
882	19.2	1.8	1.2	chr19	18522822	18522988	(40094628)	C	AluJb	SINE/Alu	(7)	305	138	1839005
2327	9.7	0.7	0.3	chr19	18522996	18523304	(40094312)	C	AluSx1	SINE/Alu	(0)	312	3	1839006
1453	17.2	11.4	0.0	chr19	18540329	18540584	(40077032)	+	AluJo	SINE/Alu	11	299	(13)	1839056
12	17.4	0.0	8.7	chr19	18588917	18588962	(40028654)	+	G-rich	Low_complexity	1	46	(0)	1839178
2252	11.2	1.9	0.3	chr19	19032155	19032459	(39585157)	C	AluSx1	SINE/Alu	(2)	310	1	1840110
16	8.0	2.0	10.0	chr19	19138816	19138864	(39478752)	+	(ACTAAGT)n	Simple_repeat	1	50	(0)	1840332
302	23.4	0.0	1.3	chr19	19381369	19381446	(39236170)	C	MIRc	SINE/MIR	(0)	268	192	1840881
2097	18.9	2.0	10.4	chr19	28134696	28135115	(30482501)	C	L1PA17	LINE/L1	(1)	6165	5770	1848319
53	0.0	0.0	0.0	chr19	28135116	28135163	(30482453)	+	(ATTT)n	Simple_repeat	1	48	(0)	1848320
3792	5.6	0.2	0.0	chr19	28135164	28135629	(30481987)	C	L1PA8	LINE/L1	(17)	6155	5689	1848321
947	14.4	11.7	0.0	chr19	28425600	28425780	(30191836)	C	Tigger1a_Art	DNA/TcMar-Tigger	(3)	494	290	1848750
1077	22.5	0.9	0.0	chr19	29377287	29377495	(29240121)	C	MER58A	DNA/hAT-Charlie	(13)	211	1	1850141
264	37.8	8.5	1.9	chr19	29504491	29504644	(29112972)	+	MIRb	SINE/MIR	91	255	(13)	1850334
387	27.6	4.6	2.0	chr19	29605758	29605913	(29011703)	C	MIR3	SINE/MIR	(52)	156	1	1850483
14	20.0	2.4	2.3	chr19	29811263	29811304	(28806312)	+	(TGAA)n	Simple_repeat	1	43	(0)	1850905
221	35.4	13.6	2.9	chr19	29845601	29846056	(28771560)	+	L2	LINE/L2	2333	2845	(574)	1850976
193	26.9	0.0	0.0	chr19	29874446	29874497	(28743119)	+	MIRc	SINE/MIR	114	165	(103)	1851046
596	27.7	17.4	2.8	chr19	29976183	29976613	(28641003)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	1	1851257
298	34.4	3.8	0.0	chr19	30133087	30133214	(28484402)	C	L2b	LINE/L2	(5)	3370	3238	1851442
2046	12.2	2.5	0.0	chr19	30133284	30133562	(28484054)	+	AluSz	SINE/Alu	13	298	(14)	1851443
23	16.4	0.0	0.0	chr19	30228034	30228076	(28389540)	+	(GTGT)n	Simple_repeat	1	43	(0)	1851579
478	21.2	0.2	0.0	chr19	30434665	30435628	(28181988)	+	(TGATGA)n	Simple_repeat	1	966	(0)	1851857
20	7.9	0.0	0.0	chr19	30443033	30443059	(28174557)	+	(T)n	Simple_repeat	1	27	(0)	1851867
23	24.4	1.1	6.2	chr19	30666354	30666448	(27951168)	+	(TCCC)n	Simple_repeat	1	96	(0)	1852165
18	26.2	1.6	3.1	chr19	31350880	31350943	(27266673)	+	(GGC)n	Simple_repeat	1	65	(0)	1853085
16	6.9	6.5	0.0	chr19	31351101	31351131	(27266485)	+	(CTTC)n	Simple_repeat	1	33	(0)	1853086
311	21.8	7.5	2.2	chr19	31351142	31351230	(27266386)	C	L1M2	LINE/L1	(2958)	3185	3092	1853087
13	17.1	3.0	0.0	chr19	32345689	32345721	(26271895)	+	G-rich	Low_complexity	1	34	(0)	1854639
12	13.4	4.2	8.0	chr19	32692415	32692462	(25925154)	+	(CCTGG)n	Simple_repeat	1	50	(0)	1855321
2158	11.5	0.0	0.3	chr19	32885334	32885621	(25731995)	C	AluJo	SINE/Alu	(25)	287	1	1855662
584	29.0	13.9	4.4	chr19	32885624	32886103	(25731513)	C	L1M7	LINE/L1	(4853)	1458	926	1855657
458	25.5	11.7	1.8	chr19	33161597	33161687	(25455929)	C	LTR85a	LTR/Gypsy?	(334)	368	276	1856324
1951	12.5	0.0	0.0	chr19	33161688	33161951	(25455665)	+	AluSz	SINE/Alu	6	269	(43)	1856325
458	25.5	11.7	1.8	chr19	33161952	33162083	(25455533)	C	LTR85a	LTR/Gypsy?	(427)	275	120	1856324
2290	8.5	0.0	4.4	chr19	33162196	33162512	(25455104)	C	AluY	SINE/Alu	(8)	303	1	1856326
363	30.2	10.0	0.0	chr19	33202295	33202420	(25415196)	+	L2a	LINE/L2	3286	3425	(1)	1856409
42	41.5	1.3	1.9	chr19	33203040	33203346	(25414270)	+	(GT)n	Simple_repeat	1	311	(0)	1856410
411	23.5	0.0	8.5	chr19	33373111	33373240	(25244376)	+	SVA_E	Retroposon/SVA	194	312	(1070)	1856705
767	12.5	0.0	0.9	chr19	33373142	33373253	(25244363)	C	AluJo	SINE/Alu	(196)	116	6	1856706
15	19.9	0.0	4.5	chr19	33622004	33622047	(24995569)	+	GA-rich	Low_complexity	1	44	(0)	1857060
12	25.0	0.0	6.8	chr19	33622077	33622135	(24995481)	+	(CCGCCCC)n	Simple_repeat	1	59	(0)	1857061
42	35.7	1.4	0.9	chr19	33778542	33778750	(24838866)	+	A-rich	Low_complexity	1	212	(0)	1857293
25	26.9	3.8	1.8	chr19	33795641	33795746	(24821870)	+	GA-rich	Low_complexity	1	110	(0)	1857330
17	20.2	6.9	2.6	chr19	33796244	33796315	(24821301)	+	(GGCGCCG)n	Simple_repeat	1	77	(0)	1857331
43	0.0	0.0	0.0	chr19	33797248	33797284	(24820332)	+	(GT)n	Simple_repeat	1	37	(0)	1857333
20	0.0	0.0	3.9	chr19	33797285	33797303	(24820313)	+	(CG)n	Simple_repeat	1	19	(0)	1857334
2148	11.6	0.7	0.3	chr19	34067130	34067458	(24550158)	C	AluSx	SINE/Alu	(0)	312	2	1857811
1656	29.5	10.3	1.7	chr19	34067459	34067540	(24550076)	+	L2	LINE/L2	2797	2882	(537)	1857809
515	34.9	5.4	0.7	chr19	34067554	34067833	(24549783)	+	L1ME3Cz	LINE/L1	285	578	(419)	1857812
12	23.8	2.2	2.1	chr19	34134452	34134497	(24483119)	+	G-rich	Low_complexity	1	47	(0)	1857971
3723	26.2	13.6	3.8	chr19	34180541	34182105	(24435511)	+	L2	LINE/L2	970	2711	(708)	1858091
2507	10.7	0.0	0.3	chr19	34217994	34218303	(24399313)	C	AluSx3	SINE/Alu	(2)	309	1	1858175
2368	9.0	0.3	0.0	chr19	34234482	34234782	(24382834)	+	AluSp	SINE/Alu	2	303	(10)	1858204
1458	11.9	0.0	6.2	chr19	34234829	34234863	(24382753)	+	AluJr	SINE/Alu	88	122	(190)	1858205
56	0.0	0.0	0.0	chr19	34234864	34234913	(24382703)	+	(TTAT)n	Simple_repeat	1	50	(0)	1858206
2423	5.0	0.4	0.0	chr19	34234915	34235194	(24382422)	C	AluYj4	SINE/Alu	(30)	281	1	1858207
2316	11.2	0.0	1.0	chr19	34282137	34282449	(24335167)	C	AluSg	SINE/Alu	(0)	310	1	1858323
754	23.7	12.1	1.4	chr19	34282450	34282677	(24334939)	C	HAL1ME	LINE/L1	(1383)	1082	824	1858322
13	20.4	0.0	4.7	chr19	34428369	34428411	(24189205)	+	(CCGCCT)n	Simple_repeat	1	43	(0)	1858626
16	22.1	2.9	5.6	chr19	34428444	34428513	(24189103)	+	G-rich	Low_complexity	1	72	(0)	1858627
17	0.0	0.0	0.0	chr19	34677161	34677179	(23940437)	+	(A)n	Simple_repeat	1	19	(0)	1858988
1458	20.7	4.2	6.5	chr19	34712488	34712828	(23904788)	+	HUERS-P3-int	LTR/ERV1	244	576	(6842)	1859029
3215	19.4	9.6	0.6	chr19	34712819	34713511	(23904105)	+	HUERS-P3-int	LTR/ERV1	718	1479	(7440)	1859029
278	34.8	5.6	0.0	chr19	34734412	34734546	(23883070)	+	MIR	SINE/MIR	50	192	(70)	1859056
17	29.1	3.1	1.5	chr19	35000120	35000184	(23617432)	+	(TC)n	Simple_repeat	1	67	(0)	1859480
1800	14.0	5.0	0.0	chr19	35059196	35059295	(23558321)	+	AluJo	SINE/Alu	17	117	(195)	1859620
28	0.0	5.9	0.0	chr19	35059296	35059329	(23558287)	+	(ACAAA)n	Simple_repeat	1	36	(0)	1859621
1800	14.0	5.0	0.0	chr19	35059330	35059493	(23558123)	+	AluJo	SINE/Alu	118	294	(18)	1859620
38	6.5	0.0	0.0	chr19	35135680	35135727	(23481889)	+	(ATG)n	Simple_repeat	1	48	(0)	1859792
765	23.4	6.0	2.2	chr19	35135728	35135959	(23481657)	C	MIR	SINE/MIR	(8)	254	19	1859793
14	22.7	5.8	5.4	chr19	35140881	35140967	(23476649)	+	(CCTCTC)n	Simple_repeat	1	92	(0)	1859804
338	31.5	4.0	5.8	chr19	35141669	35141878	(23475738)	C	L2b	LINE/L2	(10)	3377	3192	1859805
2003	10.4	0.0	5.0	chr19	35153034	35153359	(23464257)	C	AluSz	SINE/Alu	(0)	312	1	1859831
778	15.1	5.8	5.0	chr19	35297120	35299087	(23318529)	+	(AC)n	Simple_repeat	1	1982	(0)	1860124
2227	12.5	0.0	1.3	chr19	35508937	35509249	(23108367)	+	AluSx1	SINE/Alu	3	311	(1)	1860569
12	14.6	0.0	5.9	chr19	35545823	35545856	(23071760)	+	G-rich	Low_complexity	1	34	(0)	1860636
20	15.0	3.3	9.7	chr19	35557852	35557941	(23059675)	+	G-rich	Low_complexity	1	93	(0)	1860653
338	19.9	1.8	0.0	chr19	35693876	35693979	(22923637)	+	LTR41	LTR/ERVL	90	194	(564)	1860987
104	17.0	0.4	6.7	chr19	35694035	35694303	(22923313)	+	(CCT)n	Simple_repeat	1	270	(0)	1860988
243	23.7	9.5	3.8	chr19	35820006	35820057	(22797559)	+	L2	LINE/L2	2339	2396	(1023)	1861233
62	0.0	0.0	0.0	chr19	35820058	35820110	(22797506)	+	(AC)n	Simple_repeat	1	53	(0)	1861234
243	23.7	9.5	3.8	chr19	35820111	35820136	(22797480)	+	L2	LINE/L2	2397	2422	(997)	1861233
368	26.9	4.4	0.0	chr19	35820143	35820272	(22797344)	+	MER20B	DNA/hAT-Charlie	7	142	(641)	1861235
1270	20.8	1.2	4.8	chr19	35828564	35828827	(22788789)	+	MER58B	DNA/hAT-Charlie	85	339	(2)	1861260
1564	16.7	12.1	0.0	chr19	35881890	35882165	(22735451)	+	7SLRNA	srpRNA	1	314	(6)	1861356
47	0.0	2.2	0.0	chr19	35882166	35882211	(22735405)	+	(AAAT)n	Simple_repeat	1	47	(0)	1861357
298	22.9	4.5	0.0	chr19	35882213	35882302	(22735314)	+	MER91B	DNA/hAT-Tip100	44	202	(3322)	1861358
274	19.5	14.4	0.0	chr19	35882320	35882396	(22735220)	+	MER91B	DNA/hAT-Tip100	100	189	(1)	1861359
1712	15.8	2.5	1.8	chr19	35920780	35921058	(22696558)	C	AluJr	SINE/Alu	(31)	281	1	1861462
1537	26.1	6.6	9.0	chr19	35921059	35921130	(22696486)	+	L1ME3B	LINE/L1	5978	6048	(194)	1861454
38	2.6	0.0	0.0	chr19	35921191	35921230	(22696386)	+	(ATTT)n	Simple_repeat	1	40	(0)	1861463
1647	14.3	0.0	0.4	chr19	35921231	35921467	(22696149)	C	AluJb	SINE/Alu	(28)	284	49	1861464
800	9.7	0.0	23.7	chr19	35947304	35947510	(22670106)	+	AluJr	SINE/Alu	140	297	(15)	1861521
49	0.0	0.0	0.0	chr19	35947598	35947639	(22669977)	+	(GT)n	Simple_repeat	1	42	(0)	1861522
1868	8.6	7.9	0.0	chr19	35947640	35947894	(22669722)	C	AluSc8	SINE/Alu	(34)	277	1	1861523
11	11.5	10.0	2.3	chr19	35995333	35995372	(22622244)	+	(GCGCCGAG)n	Simple_repeat	1	44	(0)	1861644
42	0.0	0.0	0.0	chr19	36037244	36037279	(22580337)	+	(AC)n	Simple_repeat	1	36	(0)	1861728
19	4.3	0.0	0.0	chr19	36037300	36037323	(22580293)	+	(AC)n	Simple_repeat	1	24	(0)	1861728
44	0.0	0.0	0.0	chr19	36037344	36037381	(22580235)	+	(AC)n	Simple_repeat	1	38	(0)	1861728
838	26.6	12.5	0.7	chr19	36128478	36128765	(22488851)	+	LTR10B	LTR/ERV1	179	505	(0)	1861928
2437	8.2	0.0	0.7	chr19	36148529	36148831	(22468785)	+	AluSx	SINE/Alu	1	301	(11)	1861979
200	27.6	5.4	0.0	chr19	36149131	36149217	(22468399)	+	MIRb	SINE/MIR	50	141	(127)	1861980
2278	9.3	0.0	0.0	chr19	36170440	36170729	(22446887)	C	AluSx1	SINE/Alu	(22)	290	1	1862024
354	23.5	3.4	12.2	chr19	36170730	36170798	(22446818)	C	MLT1F	LTR/ERVL-MaLR	(57)	491	430	1862023
11	21.6	10.9	0.0	chr19	36528911	36528974	(22088642)	+	(TTGTGTGA)n	Simple_repeat	1	71	(0)	1862727
15	16.8	0.0	0.0	chr19	36528950	36528976	(22088640)	+	(GT)n	Simple_repeat	1	27	(0)	1862728
1682	12.2	3.0	1.7	chr19	36574026	36574316	(22043300)	C	MER4D1	LTR/ERV1	(0)	900	606	1862815
19	21.8	5.0	1.6	chr19	36604933	36604992	(22012624)	+	(CA)n	Simple_repeat	1	63	(0)	1862875
14	20.0	0.0	5.8	chr19	36667250	36667260	(21950356)	+	(ATTT)n	Simple_repeat	1	11	(0)	1863007
1895	4.3	14.7	0.0	chr19	36667261	36667515	(21950101)	+	AluSp	SINE/Alu	1	299	(14)	1863008
192	25.7	10.7	0.0	chr19	36687879	36687972	(21929644)	+	L2a	LINE/L2	3260	3400	(26)	1863053
2453	6.8	0.0	0.0	chr19	36797031	36797325	(21820291)	C	AluY	SINE/Alu	(16)	295	1	1863279
41	2.6	0.0	0.0	chr19	36838107	36838146	(21779470)	+	(CA)n	Simple_repeat	1	40	(0)	1863352
23	29.9	4.0	1.0	chr19	36851461	36851559	(21766057)	+	(GT)n	Simple_repeat	1	103	(0)	1863384
19	21.8	0.0	2.2	chr19	36916623	36916667	(21700949)	+	(TG)n	Simple_repeat	1	45	(0)	1863509
209	27.8	19.4	2.2	chr19	36916809	36916944	(21700672)	+	L2	LINE/L2	2042	2206	(1213)	1863510
1993	16.4	0.0	3.8	chr19	37160051	37160343	(21457273)	+	AluJb	SINE/Alu	1	284	(28)	1863917
51	0.0	0.0	0.0	chr19	37160344	37160389	(21457227)	+	(AAAT)n	Simple_repeat	1	46	(0)	1863918
1993	16.4	0.0	3.8	chr19	37160390	37160412	(21457204)	+	AluJb	SINE/Alu	285	305	(7)	1863917
2382	21.9	9.8	8.8	chr19	37160413	37160854	(21456762)	+	L1MD	LINE/L1	3090	3548	(2598)	1863916
312	32.2	10.0	3.8	chr19	37907541	37907884	(20709732)	+	MIRb	SINE/MIR	1	266	(2)	1865342
1703	12.2	13.5	0.0	chr19	37910288	37910550	(20707066)	+	AluJb	SINE/Alu	1	304	(8)	1865349
2197	10.5	3.0	0.0	chr19	37910610	37910895	(20706721)	C	AluSx	SINE/Alu	(17)	295	1	1865350
2531	5.2	0.0	2.9	chr19	37922847	37923153	(20694463)	+	AluY	SINE/Alu	1	298	(13)	1865386
629	24.4	1.6	6.2	chr19	37923154	37923226	(20694390)	C	L2a	LINE/L2	(164)	3262	3198	1865385
5177	11.9	4.6	3.4	chr19	37923227	37923756	(20693860)	C	Tigger3b	DNA/TcMar-Tigger	(0)	1231	691	1865387
1507	20.4	4.7	4.7	chr19	37979574	37979760	(20637856)	+	MER58B	DNA/hAT-Charlie	165	341	(0)	1865531
212	23.0	16.3	4.2	chr19	37979918	37980035	(20637581)	C	L2b	LINE/L2	(3)	3372	3238	1865533
1901	9.6	0.0	0.0	chr19	38243149	38243397	(20374219)	+	AluSg	SINE/Alu	54	302	(8)	1866203
1112	13.9	0.6	0.6	chr19	38243407	38243602	(20374014)	+	AluJo	SINE/Alu	137	312	(0)	1866204
2342	10.3	0.6	0.3	chr19	38243603	38243913	(20373703)	+	AluSq2	SINE/Alu	2	313	(0)	1866205
28	29.3	0.0	0.0	chr19	38243914	38243976	(20373640)	+	A-rich	Low_complexity	33	95	(0)	1866206
1915	13.8	3.8	0.0	chr19	38244215	38244496	(20373120)	C	AluJr	SINE/Alu	(19)	293	1	1866207
454	23.7	11.7	5.5	chr19	38270358	38270540	(20347076)	C	L2a	LINE/L2	(0)	3426	3231	1866274
1294	15.3	17.4	0.8	chr19	38277248	38277496	(20340120)	C	AluSx3	SINE/Alu	(10)	301	3	1866296
2296	6.8	4.6	0.0	chr19	38314978	38315270	(20302346)	+	AluSp	SINE/Alu	2	308	(5)	1866377
276	28.3	4.0	0.8	chr19	38315271	38315343	(20302273)	+	L2c	LINE/L2	3132	3206	(181)	1866370
211	23.2	5.1	0.0	chr19	38315349	38315404	(20302212)	+	L2c	LINE/L2	3317	3375	(0)	1866370
34	30.9	3.5	4.5	chr19	38335927	38336107	(20281509)	+	G-rich	Low_complexity	1	179	(0)	1866434
19	31.0	0.0	1.4	chr19	38336494	38336564	(20281052)	+	G-rich	Low_complexity	1	71	(0)	1866435
684	10.1	2.6	2.1	chr19	38375161	38375278	(20242338)	+	FLAM_C	SINE/Alu	4	146	(20)	1866529
662	18.3	4.8	19.6	chr19	38544444	38544667	(20072949)	+	MER91B	DNA/hAT-Tip100	1	189	(1)	1866900
891	13.1	1.5	0.0	chr19	38619481	38619610	(19998006)	+	FLAM_C	SINE/Alu	2	133	(10)	1867102
18	8.5	0.0	0.0	chr19	38667333	38667357	(19950259)	+	(TG)n	Simple_repeat	1	25	(0)	1867209
268	26.3	49.5	0.0	chr19	38684077	38684209	(19933407)	+	MIR	SINE/MIR	60	259	(3)	1867246
949	14.5	0.7	0.7	chr19	38851618	38851769	(19765847)	+	AluJr	SINE/Alu	137	288	(24)	1867574
2506	14.7	0.5	0.7	chr19	38862477	38862887	(19754729)	C	LTR35A	LTR/ERV1	(0)	547	138	1867607
2333	9.8	0.0	0.7	chr19	38862888	38863192	(19754424)	C	AluSx1	SINE/Alu	(9)	303	1	1867608
2010	14.2	0.7	0.3	chr19	38901497	38901785	(19715831)	C	AluSx	SINE/Alu	(15)	297	8	1867709
1606	16.8	4.5	3.1	chr19	38901786	38901877	(19715739)	C	AluJr	SINE/Alu	(225)	87	3	1867708
448	19.3	4.9	10.7	chr19	38901878	38902069	(19715547)	C	L1MEc	LINE/L1	(4034)	2366	2191	1867710
1953	14.0	0.7	1.6	chr19	38971502	38971815	(19645801)	+	AluJr	SINE/Alu	1	311	(1)	1867878
492	24.7	13.0	1.1	chr19	38971895	38972070	(19645546)	C	MIRb	SINE/MIR	(0)	268	69	1867879
39	4.7	0.0	0.0	chr19	38989611	38989655	(19627961)	+	(CCCT)n	Simple_repeat	1	45	(0)	1867933
2259	11.4	0.3	0.0	chr19	39198460	39198757	(19418859)	C	AluSz	SINE/Alu	(12)	300	2	1868512
461	26.9	4.2	1.4	chr19	39198855	39199049	(19418567)	+	MIRb	SINE/MIR	4	207	(23)	1868513
43	0.0	0.0	0.0	chr19	39320306	39320342	(19297274)	+	(AC)n	Simple_repeat	1	37	(0)	1868830
16	17.1	3.0	0.0	chr19	39320466	39320498	(19297118)	+	(CA)n	Simple_repeat	1	34	(0)	1868831
554	1.3	0.0	20.2	chr19	39412167	39412260	(19205356)	C	tRNA-Ile-ATA	tRNA	(2)	75	1	1869015
12	14.6	0.0	5.9	chr19	39435800	39435833	(19181783)	+	(CCCTT)n	Simple_repeat	1	34	(0)	1869062
241	31.9	14.3	2.7	chr19	39506476	39506697	(19110919)	C	L2b	LINE/L2	(57)	3318	3067	1869226
457	26.1	13.4	4.6	chr19	39970298	39970514	(18647102)	+	MIRb	SINE/MIR	3	241	(27)	1870034
359	22.7	0.0	0.0	chr19	40350284	40350358	(18267258)	+	MIRc	SINE/MIR	85	159	(109)	1870841
1235	24.0	13.1	4.1	chr19	40350362	40350462	(18267154)	C	L2a	LINE/L2	(2)	3424	3330	1870842
2162	12.8	0.3	0.0	chr19	40350463	40350759	(18266857)	+	AluSx	SINE/Alu	1	298	(14)	1870843
1046	15.2	0.0	1.2	chr19	40379903	40380066	(18237550)	C	AluJb	SINE/Alu	(64)	248	87	1870915
1095	28.0	6.9	6.3	chr19	40403191	40403235	(18214381)	+	L2a	LINE/L2	3388	3425	(1)	1870949
530	24.8	14.6	5.8	chr19	40403330	40403552	(18214064)	C	MIR	SINE/MIR	(0)	262	17	1870960
594	20.8	4.0	0.0	chr19	40416391	40416534	(18201082)	C	L1MD	LINE/L1	(2046)	4100	3951	1870996
946	12.1	0.0	0.8	chr19	40416537	40416668	(18200948)	C	FLAM_C	SINE/Alu	(12)	131	1	1870997
1867	10.9	0.0	14.0	chr19	40416703	40417051	(18200565)	C	AluSx1	SINE/Alu	(10)	302	3	1870998
243	32.7	3.2	1.7	chr19	40598566	40598696	(18018920)	C	MIR3	SINE/MIR	(136)	132	2	1871499
44	0.0	0.0	0.0	chr19	40602146	40602183	(18015433)	+	(TG)n	Simple_repeat	1	38	(0)	1871501
15	7.2	3.3	0.0	chr19	40602184	40602206	(18015410)	+	(GGGGGT)n	Simple_repeat	1	24	(0)	1871502
42	0.0	0.0	0.0	chr19	40634800	40634837	(17982779)	+	(CAT)n	Simple_repeat	1	38	(0)	1871567
2307	10.2	0.0	0.7	chr19	40634848	40635152	(17982464)	+	AluSx1	SINE/Alu	1	303	(9)	1871568
246	22.4	13.3	2.3	chr19	40662446	40662532	(17955084)	C	L2b	LINE/L2	(174)	3201	3104	1871649
2211	8.7	2.0	0.0	chr19	40662554	40662841	(17954775)	C	AluSx1	SINE/Alu	(17)	295	2	1871650
240	28.8	16.9	1.7	chr19	40716456	40716575	(17901041)	+	MIRb	SINE/MIR	117	258	(10)	1871777
268	29.8	0.1	1.6	chr19	40716590	40716687	(17900929)	C	MIRc	SINE/MIR	(87)	121	27	1871778
2128	13.2	0.7	0.0	chr19	40937582	40937884	(17679732)	+	AluSx	SINE/Alu	1	305	(7)	1872270
1704	14.2	3.7	3.4	chr19	40938219	40938513	(17679103)	C	AluJr	SINE/Alu	(12)	300	5	1872271
2599	5.8	0.0	0.0	chr19	41262758	41263068	(17354548)	+	AluSq	SINE/Alu	1	311	(2)	1873026
639	4.3	0.0	3.1	chr19	41893305	41893992	(16723624)	C	MSR1	Satellite	(8)	667	1	1874137
50	5.6	0.0	0.0	chr19	41894124	41894179	(16723437)	+	(GT)n	Simple_repeat	1	56	(0)	1874138
2733	25.7	10.0	3.5	chr19	42010086	42010825	(16606791)	+	L1MEc	LINE/L1	1124	1935	(4465)	1874353
417	28.4	3.5	0.0	chr19	42034557	42034665	(16582951)	C	L2a	LINE/L2	(0)	3426	3314	1874426
227	31.6	4.8	3.0	chr19	42034874	42034974	(16582642)	+	L2b	LINE/L2	3271	3373	(2)	1874421
19	28.0	2.4	3.5	chr19	42161540	42161624	(16455992)	+	GA-rich	Low_complexity	1	87	(0)	1874709
12	28.5	4.6	1.5	chr19	42280618	42280682	(16336934)	+	(GCCG)n	Simple_repeat	1	68	(0)	1874952
13	21.3	2.6	0.0	chr19	42283539	42283576	(16334040)	+	(AGTGTG)n	Simple_repeat	1	39	(0)	1874956
2143	9.5	0.0	1.8	chr19	42403446	42403729	(16213887)	C	AluSz6	SINE/Alu	(10)	302	24	1875206
292	38.0	5.1	1.6	chr19	42403935	42404057	(16213559)	C	Tigger8	DNA/TcMar-Tigger	(261)	406	276	1875207
11	17.4	0.0	5.6	chr19	43503931	43503966	(15113650)	+	(CTGCCT)n	Simple_repeat	1	36	(0)	1876955
1969	11.5	0.7	5.1	chr19	43595585	43595897	(15021719)	+	AluJr	SINE/Alu	4	302	(10)	1877192
1062	13.5	4.9	0.0	chr19	43687355	43687510	(14930106)	C	AluJo	SINE/Alu	(10)	302	139	1877437
42	0.0	0.0	0.0	chr19	43687531	43687566	(14930050)	+	(GT)n	Simple_repeat	1	36	(0)	1877438
402	24.8	7.5	8.6	chr19	43934794	43934956	(14682660)	C	MIR	SINE/MIR	(40)	222	62	1877949
296	32.5	3.0	0.6	chr19	44113744	44113907	(14503709)	+	MIR	SINE/MIR	69	236	(26)	1878225
194	31.7	9.6	0.8	chr19	44141949	44142072	(14475544)	+	MIR	SINE/MIR	104	239	(23)	1878266
1089	24.2	11.2	2.4	chr19	44254878	44255300	(14362316)	C	MLT1C	LTR/ERVL-MaLR	(2)	465	1	1878451
4739	19.4	8.5	7.7	chr19	44255301	44256661	(14360955)	+	L1M4	LINE/L1	1058	2459	(5161)	1878450
4675	13.9	3.2	0.1	chr19	44258678	44259488	(14358128)	+	Tigger2b_Pri	DNA/TcMar-Tigger	1	837	(231)	1878454
2394	9.4	0.7	0.3	chr19	44259489	44259797	(14357819)	C	AluSg	SINE/Alu	(0)	310	1	1878455
1701	12.1	0.8	0.4	chr19	44644709	44644947	(13972669)	C	AluSx3	SINE/Alu	(3)	308	69	1879204
18	8.5	0.0	0.0	chr19	45039357	45039381	(13578235)	+	(A)n	Simple_repeat	1	25	(0)	1880309
1167	16.6	0.8	3.1	chr19	45256723	45256951	(13360665)	+	Tigger1	DNA/TcMar-Tigger	1	227	(2191)	1880827
1734	12.9	0.0	3.4	chr19	45256952	45257215	(13360401)	C	AluJr	SINE/Alu	(10)	302	48	1880828
661	29.8	4.7	3.9	chr19	45338485	45338739	(13278877)	C	L2b	LINE/L2	(4)	3371	3115	1881054
2287	8.6	0.3	0.0	chr19	45338907	45339196	(13278420)	C	AluSq2	SINE/Alu	(17)	296	6	1881055
263	27.3	17.9	1.7	chr19	45450020	45450224	(13167392)	C	MIR	SINE/MIR	(1)	267	27	1881346
2362	7.7	1.3	1.9	chr19	45450488	45450799	(13166817)	+	AluSx	SINE/Alu	1	310	(2)	1881347
2443	9.2	0.0	0.0	chr19	45484842	45485145	(13132471)	C	AluSz6	SINE/Alu	(8)	304	1	1881443
2074	17.6	0.3	0.0	chr19	45542306	45542646	(13074970)	C	Tigger3a	DNA/TcMar-Tigger	(0)	348	7	1881585
2027	11.4	0.4	1.4	chr19	45542658	45542969	(13074647)	C	AluSc5	SINE/Alu	(0)	309	2	1881586
2193	10.6	0.0	0.0	chr19	45637646	45637976	(12979640)	C	AluSq	SINE/Alu	(0)	313	1	1881864
1626	15.5	0.0	1.9	chr19	45637977	45638082	(12979534)	C	AluJb	SINE/Alu	(178)	134	30	1881863
222	28.6	0.0	0.0	chr19	45724476	45724524	(12893092)	+	L2b	LINE/L2	3314	3362	(13)	1882096
1858	12.7	0.3	7.3	chr19	45724526	45724653	(12892963)	+	AluJo	SINE/Alu	1	127	(185)	1882097
575	30.4	5.7	0.0	chr19	46612152	46612332	(12005284)	+	MIR	SINE/MIR	1	192	(70)	1884103
625	33.0	2.1	1.3	chr19	46612386	46612629	(12004987)	C	MIRb	SINE/MIR	(9)	259	5	1884104
187	29.0	16.2	0.0	chr19	46781030	46781122	(11836494)	C	MIR	SINE/MIR	(0)	262	152	1884525
180	34.9	3.6	3.6	chr19	46781151	46781260	(11836356)	+	MIRb	SINE/MIR	158	267	(1)	1884526
2507	6.3	0.3	0.0	chr19	46781319	46781620	(11835996)	+	AluSp	SINE/Alu	3	305	(8)	1884527
12	0.0	0.0	12.9	chr19	47036074	47036104	(11581512)	+	(CTCCT)n	Simple_repeat	1	31	(0)	1885121
1726	13.7	0.0	0.4	chr19	47132013	47132261	(11485355)	C	AluSz	SINE/Alu	(63)	249	2	1885346
1607	14.0	4.0	9.2	chr19	47132262	47132576	(11485040)	C	AluJb	SINE/Alu	(14)	298	1	1885347
2002	12.1	7.4	0.3	chr19	47242603	47242892	(11374724)	C	AluSq	SINE/Alu	(1)	312	1	1885630
30	29.3	0.8	5.3	chr19	47242925	47243056	(11374560)	+	(TG)n	Simple_repeat	1	133	(0)	1885631
377	30.0	8.2	4.0	chr19	47598501	47598659	(11018957)	+	MIR	SINE/MIR	39	207	(55)	1886535
408	12.9	1.6	0.0	chr19	47598773	47598834	(11018782)	C	AluYk11	SINE/Alu	(248)	63	1	1886537
2088	12.9	0.7	1.0	chr19	47711549	47711718	(10905898)	+	AluSz	SINE/Alu	134	305	(7)	1886844
365	28.9	1.0	3.7	chr19	47711729	47711836	(10905780)	+	MIR	SINE/MIR	158	262	(0)	1886846
1019	27.4	8.5	0.7	chr19	47711831	47712358	(10905258)	C	L2a	LINE/L2	(4)	3383	2805	1886847
47	0.0	0.0	0.0	chr19	47743418	47743457	(10874159)	+	(GT)n	Simple_repeat	1	40	(0)	1886953
13	30.2	0.0	4.5	chr19	48634580	48634645	(9982971)	+	(CCCGCC)n	Simple_repeat	1	66	(0)	1889251
207	26.3	5.0	0.0	chr19	48637311	48637367	(9980249)	+	X9_LINE	LINE/L1	584	643	(293)	1889253
14	10.7	3.1	3.0	chr19	48637382	48637413	(9980203)	+	GA-rich	Low_complexity	1	33	(0)	1889254
181	18.0	0.0	10.7	chr19	48954548	48954603	(9663013)	+	L2	LINE/L2	3019	3068	(351)	1890057
15	21.0	1.8	5.4	chr19	48954872	48954926	(9662690)	+	(GGC)n	Simple_repeat	1	56	(0)	1890063
13	19.8	0.0	2.7	chr19	49361581	49361617	(9255999)	+	(CTCCC)n	Simple_repeat	1	37	(0)	1890948
2157	14.3	0.0	0.9	chr19	49366693	49367007	(9250609)	C	AluSx	SINE/Alu	(0)	312	1	1890957
1645	15.9	0.0	3.6	chr19	49452378	49452654	(9164962)	+	AluJb	SINE/Alu	40	306	(6)	1891123
2221	12.0	0.0	0.3	chr19	49452714	49453021	(9164595)	C	AluSx	SINE/Alu	(5)	307	1	1891124
12	11.7	10.8	0.0	chr19	49513504	49513540	(9104076)	+	(GCAG)n	Simple_repeat	1	41	(0)	1891261
30	35.6	2.2	0.0	chr19	49513652	49513789	(9103827)	+	(CT)n	Simple_repeat	1	141	(0)	1891262
368	29.8	7.0	0.0	chr19	49874616	49874749	(8742867)	+	MIR3	SINE/MIR	18	159	(49)	1892111
187	38.9	1.5	1.5	chr19	49874743	49874875	(8742741)	+	L3	LINE/CR1	3910	4042	(57)	1892112
467	30.3	3.8	5.3	chr19	49875064	49875251	(8742365)	C	MIR	SINE/MIR	(70)	192	8	1892113
1886	10.2	5.0	0.4	chr19	49986907	49987172	(8630444)	C	AluSg4	SINE/Alu	(31)	279	1	1892352
219	37.6	6.5	2.5	chr19	49987173	49987241	(8630375)	+	L2	LINE/L2	2428	2502	(917)	1892351
2154	11.6	1.7	0.0	chr19	50316460	50316751	(8300865)	+	AluSx1	SINE/Alu	2	298	(14)	1893260
275	28.6	20.4	0.7	chr19	50669448	50669588	(7948028)	+	MER91A	DNA/hAT-Tip100	1	176	(20)	1894060
398	26.9	2.1	2.8	chr19	50669652	50669796	(7947820)	+	MER113B	DNA/hAT-Charlie	88	231	(71)	1894061
13	13.6	4.3	6.2	chr19	50725315	50725360	(7892256)	+	(GCCCA)n	Simple_repeat	1	48	(0)	1894171
11	16.9	5.8	5.5	chr19	50791338	50791389	(7826227)	+	(CTCCAAC)n	Simple_repeat	1	55	(0)	1894362
919	31.0	8.2	6.8	chr19	51091945	51092875	(7524741)	+	L2b	LINE/L2	2490	3421	(5)	1894998
312	31.7	4.6	0.0	chr19	51092883	51092986	(7524630)	+	L2b	LINE/L2	3297	3405	(21)	1894998
12	20.6	6.7	0.0	chr19	51366809	51366853	(7250763)	+	(TCCCTA)n	Simple_repeat	1	48	(0)	1895482
87	27.5	4.3	2.6	chr19	51688644	51689110	(6928506)	+	GA-rich	Low_complexity	1	475	(0)	1896048
673	14.1	1.2	2.0	chr19	51704496	51705028	(6912588)	+	MSR1	Satellite	1	528	(2)	1896078
937	18.4	6.2	0.2	chr19	52237716	52237933	(6379683)	+	L1MA4	LINE/L1	5978	6219	(81)	1897074
552	21.7	10.9	2.8	chr19	52237934	52238076	(6379540)	C	FRAM	SINE/Alu	(20)	156	1	1897075
1241	23.4	5.7	5.4	chr19	52238109	52238497	(6379119)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	1897076
34	0.0	0.0	0.0	chr19	53980058	53980086	(4637530)	+	(GT)n	Simple_repeat	1	29	(0)	1900731
15	23.2	0.0	0.0	chr19	53980087	53980114	(4637502)	+	(GC)n	Simple_repeat	1	28	(0)	1900732
223	33.8	4.8	0.0	chr19	54159278	54159357	(4458259)	C	L2a	LINE/L2	(1)	3425	3342	1901191
2154	10.8	1.0	2.9	chr19	54448652	54448966	(4168650)	+	AluSg	SINE/Alu	1	309	(1)	1901778
13	23.2	0.0	2.4	chr19	55655318	55655359	(2962257)	+	G-rich	Low_complexity	1	42	(0)	1904237
1157	18.7	4.2	4.9	chr19	56177893	56178179	(2439437)	+	L1MA8	LINE/L1	6007	6291	(0)	1905296
1781	18.8	1.0	0.7	chr19	56178182	56178490	(2439126)	+	AluJo	SINE/Alu	1	310	(2)	1905297
52	2.1	0.0	0.0	chr19	56595840	56595888	(2021728)	+	(TG)n	Simple_repeat	1	49	(0)	1906050
400	36.3	8.8	1.1	chr19	58181731	58182087	(435529)	+	L1M5	LINE/L1	4061	4447	(1699)	1909056
17	18.7	6.2	6.8	chr19	58305442	58305538	(312078)	+	(AGTGGTG)n	Simple_repeat	1	103	(0)	1909308
2296	19.6	0.7	0.5	chr19	58305671	58306101	(311515)	+	LTR3	LTR/ERVK	1	432	(0)	1909309
14	23.8	5.5	0.0	chr19	58558219	58558273	(59343)	+	(CCTCCGA)n	Simple_repeat	1	58	(0)	1909726
229	23.7	1.7	4.8	chr2	3424121	3424182	(238769347)	+	L2b	LINE/L2	3315	3374	(1)	1914468
863	16.0	0.0	0.0	chr2	3424227	3424351	(238769178)	C	FLAM_A	SINE/Alu	(17)	125	1	1914469
2216	8.7	1.0	2.7	chr2	9983875	9984173	(232209356)	+	AluSq2	SINE/Alu	1	294	(19)	1923978
958	26.3	12.6	1.2	chr2	10332570	10332969	(231860560)	C	MER31B	LTR/ERV1	(5)	461	10	1924590
2537	6.2	0.0	0.7	chr2	10690133	10690440	(231503089)	+	AluSx1	SINE/Alu	2	307	(5)	1925242
409	13.4	1.6	0.7	chr2	11113187	11113880	(231079649)	+	(TTCC)n	Simple_repeat	1	705	(0)	1926044
284	28.7	7.5	0.3	chr2	11113881	11113998	(231079531)	C	L2a	LINE/L2	(1)	3425	3251	1926045
53	0.0	0.0	0.0	chr2	11132998	11133042	(231060487)	+	(CA)n	Simple_repeat	1	45	(0)	1926079
18	14.7	0.0	0.0	chr2	12236135	12236164	(229957365)	+	(TC)n	Simple_repeat	1	30	(0)	1927976
444	24.3	5.3	0.0	chr2	12236203	12236355	(229957174)	C	HAL1ME	LINE/L1	(343)	2164	1971	1927975
682	20.1	1.4	0.0	chr2	15243013	15243151	(226950378)	+	L2a	LINE/L2	2606	2746	(673)	1932422
511	28.5	13.4	3.8	chr2	15243154	15243441	(226950088)	+	MLT1J1	LTR/ERVL-MaLR	1	320	(124)	1932423
1923	29.0	13.0	8.8	chr2	15243543	15244790	(226948739)	+	MLT1J1-int	LTR/ERVL-MaLR	46	1353	(34)	1932423
1515	20.5	8.4	1.8	chr2	15259282	15259764	(226933765)	+	MER67B	LTR/ERV1	1	418	(243)	1932439
2357	14.4	0.2	1.0	chr2	16784316	16784708	(225408821)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	1935053
185	35.0	2.0	1.0	chr2	16784709	16784809	(225408720)	C	MIR3	SINE/MIR	(104)	104	3	1935054
258	30.8	0.0	9.0	chr2	16784817	16784916	(225408613)	+	MIR	SINE/MIR	28	118	(144)	1935055
455	30.5	2.3	3.2	chr2	19504876	19505092	(222688437)	C	X7B_LINE	LINE/CR1	(0)	250	36	1938904
1226	20.9	3.8	1.3	chr2	23912006	23912214	(218281315)	+	L1ME5	LINE/L1	2627	2845	(3301)	1945075
1799	16.1	1.6	4.8	chr2	23912215	23912530	(218280999)	+	AluJo	SINE/Alu	1	306	(6)	1945076
349	33.6	1.9	0.0	chr2	23921386	23921489	(218272040)	+	L4_B_Mam	LINE/RTE-X	4098	4203	(738)	1945104
186	21.6	1.9	3.8	chr2	26605654	26605706	(215587823)	C	L2b	LINE/L2	(0)	3375	3324	1950219
248	29.2	13.3	7.3	chr2	26605681	26605898	(215587631)	C	MIRb	SINE/MIR	(21)	247	15	1950220
16	19.4	4.7	4.5	chr2	26786210	26786273	(215407256)	+	(GCCCGA)n	Simple_repeat	1	67	(0)	1950610
265	24.1	0.0	0.0	chr2	27169885	27169938	(215023591)	+	L1MEd	LINE/L1	5681	5735	(429)	1951299
587	20.3	7.7	0.0	chr2	27169954	27170096	(215023433)	+	LTR50	LTR/ERVL	59	213	(582)	1951304
804	19.2	0.0	0.0	chr2	27249861	27249985	(214943544)	+	FLAM_A	SINE/Alu	4	128	(14)	1951436
14	9.6	0.0	0.0	chr2	27380143	27380165	(214813364)	+	(TCC)n	Simple_repeat	1	23	(0)	1951695
289	29.1	6.5	4.2	chr2	31334663	31334827	(210858702)	C	MIR3	SINE/MIR	(3)	205	37	1958370
16	22.7	3.5	1.7	chr2	32011040	32011097	(210182432)	+	(GGCGCAG)n	Simple_repeat	1	60	(0)	1959290
380	29.6	9.3	4.3	chr2	38014747	38015000	(204178529)	C	L2c	LINE/L2	(0)	3387	3120	1968575
16	21.7	3.1	4.5	chr2	38377423	38377486	(203816043)	+	(CGCC)n	Simple_repeat	1	66	(0)	1969098
216	25.3	13.3	9.9	chr2	38432315	38432369	(203761160)	+	MIR3	SINE/MIR	97	158	(50)	1969215
357	29.0	8.5	2.4	chr2	38432370	38432535	(203760994)	+	MER5B	DNA/hAT-Charlie	2	178	(0)	1969216
1788	12.5	0.7	7.8	chr2	38600445	38600764	(203592765)	+	AluJb	SINE/Alu	1	297	(15)	1969541
232	32.2	6.3	6.9	chr2	38600765	38600832	(203592697)	C	MIRc	SINE/MIR	(192)	76	8	1969540
353	20.7	4.8	4.8	chr2	42360314	42360442	(199833087)	C	MIR	SINE/MIR	(131)	137	9	1975393
38	0.0	0.0	0.0	chr2	43219054	43219086	(198974443)	+	(CA)n	Simple_repeat	1	33	(0)	1977136
37	0.0	5.1	0.0	chr2	43219625	43219663	(198973866)	+	(CA)n	Simple_repeat	1	41	(0)	1977137
245	26.1	3.0	0.0	chr2	47173455	47173519	(195020010)	+	MER5A1	DNA/hAT-Charlie	73	139	(27)	1983477
816	28.6	1.2	1.2	chr2	48732950	48733193	(193460336)	+	UCON29	DNA/PiggyBac?	20	263	(176)	1986469
2175	7.0	7.1	0.0	chr2	55519117	55519403	(186674126)	C	AluSx	SINE/Alu	(0)	312	4	1996064
2194	12.1	0.0	1.3	chr2	61329019	61329323	(180864206)	C	AluSp	SINE/Alu	(10)	303	3	2004104
1292	23.0	8.2	2.2	chr2	61620449	61620768	(180572761)	C	MLT1G	LTR/ERVL-MaLR	(0)	591	251	2004765
502	20.9	0.0	0.0	chr2	61620770	61620855	(180572674)	C	MLT1G-int	LTR/ERVL-MaLR	(1315)	94	9	2004765
2144	13.3	0.7	0.0	chr2	61791389	61791719	(180401810)	+	AluJb	SINE/Alu	1	312	(0)	2005198
339	6.8	0.0	0.0	chr2	61791720	61791763	(180401766)	+	MER50	LTR/ERV1	182	225	(509)	2005196
1371	13.5	1.2	6.3	chr2	61791761	61791827	(180401702)	+	MER50	LTR/ERV1	433	486	(248)	2005196
2315	7.0	0.0	3.3	chr2	61791828	61792128	(180401401)	+	AluY	SINE/Alu	1	291	(20)	2005199
202	33.3	4.0	2.0	chr2	64105032	64105129	(178088400)	+	Tigger19b	DNA/TcMar-Tigger	450	549	(1)	2008844
18	12.6	0.0	0.0	chr2	64105425	64105461	(178088068)	+	(AC)n	Simple_repeat	1	37	(0)	2008845
202	16.7	7.7	0.0	chr2	64105515	64105550	(178087979)	C	L2a	LINE/L2	(15)	3411	3373	2008846
498	31.1	9.8	4.2	chr2	64105521	64105711	(178087818)	C	MIRb	SINE/MIR	(20)	248	46	2008847
360	25.0	1.3	0.0	chr2	65411140	65411215	(176782314)	C	MIRb	SINE/MIR	(26)	242	166	2011196
2425	6.0	0.0	0.0	chr2	65552913	65553193	(176640336)	+	AluSg	SINE/Alu	2	282	(28)	2011503
31	2.2	4.1	3.9	chr2	65553194	65553242	(176640287)	+	(AAC)n	Simple_repeat	1	51	(0)	2011504
30	9.6	2.2	0.0	chr2	66435286	66435331	(175758198)	+	(AG)n	Simple_repeat	1	47	(0)	2012779
1743	30.3	5.5	4.7	chr2	67950086	67951210	(174242319)	C	HAL1	LINE/L1	(601)	1906	773	2014804
271	30.8	12.0	0.8	chr2	68357980	68358097	(173835432)	C	MER91A	DNA/hAT-Tip100	(42)	154	22	2015497
582	28.4	6.3	10.7	chr2	69566978	69567521	(172626008)	+	L2b	LINE/L2	2842	3363	(12)	2017304
15	17.8	2.6	0.0	chr2	69567572	69567609	(172625920)	+	(AACAAC)n	Simple_repeat	1	39	(0)	2017305
320	28.8	21.2	0.4	chr2	70755365	70755591	(171437938)	+	L2a	LINE/L2	3138	3424	(2)	2019557
218	25.7	4.2	8.9	chr2	71276168	71276291	(170917238)	+	L2c	LINE/L2	3250	3367	(20)	2020406
881	29.5	3.1	0.4	chr2	73323569	73323820	(168869709)	C	MIR	SINE/MIR	(1)	261	3	2023519
1696	24.2	9.1	2.3	chr2	84631078	84631398	(157562131)	+	MER90	LTR/ERV1	12	371	(204)	2039242
1556	22.7	4.3	5.5	chr2	84631399	84631869	(157561660)	+	MLT1C	LTR/ERVL-MaLR	1	465	(2)	2039243
2028	17.1	13.5	6.5	chr2	86704506	86704999	(155488530)	+	MLT1F2	LTR/ERVL-MaLR	1	534	(26)	2043077
358	29.8	8.2	12.7	chr2	95729181	95729464	(146464065)	C	L2a	LINE/L2	(3)	3423	3154	2051137
13	20.9	5.0	0.0	chr2	96532300	96532339	(145661190)	+	(TTCT)n	Simple_repeat	1	42	(0)	2052303
222	34.8	3.2	3.2	chr2	108584204	108584298	(133609231)	C	L2b	LINE/L2	(20)	3355	3261	2069484
2154	14.1	0.0	0.0	chr2	108966938	108967234	(133226295)	C	AluSx1	SINE/Alu	(15)	297	1	2070057
194	30.5	11.9	9.0	chr2	109162942	109163096	(133030433)	C	MamTip2	DNA/hAT-Tip100	(78)	227	68	2070370
20	0.0	0.0	0.0	chr2	120348657	120348678	(121844851)	+	(A)n	Simple_repeat	1	22	(0)	2086810
2209	9.6	0.0	0.3	chr2	121281951	121282232	(120911297)	C	AluSq	SINE/Alu	(32)	281	1	2088421
260	25.9	14.7	7.9	chr2	128093698	128093823	(114099706)	+	MIRb	SINE/MIR	19	154	(114)	2098659
196	35.0	10.2	0.0	chr2	128093822	128093918	(114099611)	C	L2b	LINE/L2	(4)	3371	3264	2098660
271	30.0	0.0	1.2	chr2	128093935	128094015	(114099514)	+	MIRb	SINE/MIR	175	254	(14)	2098659
13	14.8	8.5	2.0	chr2	135985449	135985495	(106208034)	+	(CTGGACA)n	Simple_repeat	1	51	(0)	2109962
1273	27.6	12.0	6.0	chr2	149313272	149314037	(92879492)	C	L1MEi	LINE/L1	(1349)	863	46	2127900
275	24.7	3.4	1.2	chr2	149314065	149314150	(92879379)	+	MamGypLTR1b	LTR/Gypsy	695	782	(0)	2127901
337	34.7	10.2	3.0	chr2	149365240	149365438	(92828091)	C	MIRc	SINE/MIR	(38)	230	16	2127977
532	25.4	9.2	2.5	chr2	151238504	151238680	(90954849)	C	L1MC5a	LINE/L1	(249)	2528	2346	2130529
226	10.8	5.1	0.0	chr2	151238932	151238968	(90954561)	C	tRNA-Ile-ATA	tRNA	(38)	39	1	2130531
1967	13.6	1.3	0.7	chr2	152095652	152095952	(90097577)	C	AluSz	SINE/Alu	(9)	303	1	2131853
36	22.2	1.2	0.0	chr2	152098738	152098822	(90094707)	+	GA-rich	Low_complexity	1	86	(0)	2131855
26	17.8	0.0	3.3	chr2	152098885	152098945	(90094584)	+	GA-rich	Low_complexity	1	61	(0)	2131855
315	28.6	11.6	1.2	chr2	159250653	159250822	(82942707)	C	L2	LINE/L2	(2235)	1184	995	2141316
345	30.8	8.9	3.7	chr2	168244431	168244673	(73948856)	+	UCON2	DNA?	124	380	(205)	2153268
1002	25.1	2.1	0.9	chr2	169324063	169324295	(72869234)	C	MIR	SINE/MIR	(21)	241	6	2154774
2425	8.1	0.0	0.3	chr2	169790361	169790657	(72402872)	C	AluSg	SINE/Alu	(14)	296	1	2155605
445	27.0	10.7	1.8	chr2	169824114	169824385	(72369144)	C	L2a	LINE/L2	(6)	3420	3122	2155675
3775	14.5	10.3	1.0	chr2	171120273	171121244	(71072285)	+	L1MB3	LINE/L1	5135	6183	(0)	2157816
1845	15.3	1.4	0.4	chr2	171121259	171121533	(71071996)	+	AluJb	SINE/Alu	8	285	(27)	2157818
455	27.3	12.6	1.9	chr2	171990748	171991072	(70202457)	+	HAL1	LINE/L1	987	1351	(1156)	2159403
623	22.6	16.9	0.5	chr2	171991088	171991307	(70202222)	C	MIR	SINE/MIR	(7)	255	1	2159404
416	23.8	5.6	2.6	chr2	171991349	171991529	(70202000)	+	HAL1	LINE/L1	1371	1619	(846)	2159403
16	19.5	1.9	7.3	chr2	172000139	172000192	(70193337)	+	(AC)n	Simple_repeat	1	55	(0)	2159420
1128	23.4	15.6	4.7	chr2	172358348	172358755	(69834774)	+	MLT1C	LTR/ERVL-MaLR	5	465	(2)	2160042
333	23.6	7.3	0.0	chr2	172358760	172358848	(69834681)	C	MER33	DNA/hAT-Charlie	(178)	146	51	2160043
359	26.9	7.3	15.4	chr2	173841148	173841283	(68352246)	+	L2b	LINE/L2	3251	3374	(13)	2162261
32	0.0	0.0	0.0	chr2	173841284	173841313	(68352216)	+	(TGAA)n	Simple_repeat	1	30	(0)	2162265
300	29.1	1.3	0.0	chr2	174760990	174761072	(67432457)	C	MIRb	SINE/MIR	(138)	130	40	2163804
382	28.1	6.2	1.6	chr2	174761112	174761234	(67432295)	+	Tigger16b	DNA/TcMar-Tigger	204	332	(4)	2163805
1534	14.4	0.0	11.4	chr2	174761316	174761613	(67431916)	C	AluJb	SINE/Alu	(47)	265	2	2163806
21	25.1	1.4	2.8	chr2	175004769	175004839	(67188690)	+	(GCCCC)n	Simple_repeat	1	72	(0)	2164157
17	22.8	0.0	0.0	chr2	176096831	176096866	(66096663)	+	GA-rich	Low_complexity	1	36	(0)	2165659
52	2.1	0.0	0.0	chr2	176136151	176136199	(66057330)	+	(AC)n	Simple_repeat	1	49	(0)	2165692
36	22.4	6.3	3.5	chr2	176136222	176136380	(66057149)	+	GA-rich	Low_complexity	1	169	(0)	2165693
78	9.9	6.8	3.2	chr2	177313260	177313436	(64880093)	+	(TTCC)n	Simple_repeat	1	189	(0)	2167456
962	19.1	2.5	0.0	chr2	177313447	177313603	(64879926)	C	AluJb	SINE/Alu	(16)	296	136	2167457
662	21.6	2.0	0.7	chr2	177598695	177598843	(64594686)	C	MIRc	SINE/MIR	(4)	264	114	2167840
821	33.8	4.8	2.9	chr2	178008644	178009054	(64184475)	+	MamRTE1	LINE/RTE-BovB	3176	3594	(218)	2168413
533	33.0	5.7	4.1	chr2	180670198	180670440	(61523089)	C	MIR	SINE/MIR	(4)	258	12	2171757
5291	13.3	1.1	1.5	chr2	180670707	180672125	(61521404)	C	L1PA16	LINE/L1	(3)	6163	4739	2171758
21	8.9	0.0	2.6	chr2	181892203	181892211	(60301318)	+	(CGAGGA)n	Simple_repeat	1	37	(0)	2173264
18	7.6	0.0	0.0	chr2	181892212	181892239	(60301290)	+	(AGG)n	Simple_repeat	1	28	(0)	2173265
1295	22.5	16.5	1.4	chr2	182668545	182669053	(59524476)	C	LTR18B	LTR/ERVL	(13)	601	1	2174295
277	30.2	1.9	1.9	chr2	182915585	182915692	(59277837)	+	X6A_LINE	LINE/CR1	969	1076	(4)	2174620
1759	18.7	0.6	2.1	chr2	190467652	190467989	(51725540)	+	MER58B	DNA/hAT-Charlie	9	341	(0)	2184423
2006	15.1	0.0	2.0	chr2	190468454	190468758	(51724771)	C	AluJb	SINE/Alu	(13)	299	1	2184425
652	31.9	10.8	1.6	chr2	196520278	196520704	(45672825)	+	LTR82A	LTR/ERVL	402	872	(0)	2192522
18	15.5	0.0	0.0	chr2	197311360	197311389	(44882140)	+	(AC)n	Simple_repeat	1	30	(0)	2193755
2590	20.8	8.3	0.7	chr2	197782174	197782740	(44410789)	+	MER90a	LTR/ERV1	1	614	(0)	2194584
18	12.2	6.4	2.0	chr2	199911313	199911359	(42282170)	+	(CGCCGGC)n	Simple_repeat	1	50	(0)	2197519
13	29.3	0.0	0.0	chr2	199911453	199911494	(42282035)	+	(GCT)n	Simple_repeat	1	42	(0)	2197520
322	25.0	5.7	0.0	chr2	200889152	200889251	(41304278)	C	MER94	DNA/hAT-Blackjack	(6)	128	23	2199071
17	22.8	0.0	0.0	chr2	201888034	201888069	(40305460)	+	(T)n	Simple_repeat	1	36	(0)	2200773
769	27.9	12.0	2.5	chr2	202671181	202671548	(39521981)	C	LTR16C	LTR/ERVL	(0)	489	82	2202498
13	26.1	0.0	6.5	chr2	204551535	204551596	(37641933)	+	(CTCTCC)n	Simple_repeat	1	62	(0)	2205795
1662	16.8	0.0	9.5	chr2	206208644	206208970	(35984559)	C	AluJb	SINE/Alu	(16)	296	1	2208225
249	20.0	0.0	0.0	chr2	206209000	206209049	(35984480)	C	MADE2	DNA/TcMar-Mariner	(0)	80	31	2208226
2067	14.2	0.0	0.3	chr2	206209057	206209352	(35984177)	+	AluSz6	SINE/Alu	2	296	(16)	2208227
654	29.5	5.3	7.6	chr2	206230450	206230819	(35962710)	+	LTR88c	LTR/Gypsy?	4	364	(498)	2208273
792	15.6	0.5	4.7	chr2	207930278	207930439	(34263090)	+	FLAM_C	SINE/Alu	8	211	(91)	2210971
197	29.2	1.1	11.9	chr2	209496188	209496288	(32697241)	C	L2c	LINE/L2	(17)	3370	3281	2213106
18	22.2	1.9	1.8	chr2	213151960	213152018	(29041511)	+	(CGCC)n	Simple_repeat	1	59	(0)	2217872
195	24.2	16.8	4.6	chr2	218290867	218290996	(23902533)	C	L3	LINE/CR1	(151)	3948	3800	2225781
199	26.2	10.8	6.1	chr2	219249362	219249475	(22944054)	+	LFSINE_Vert	SINE/tRNA	313	432	(27)	2227581
540	24.0	12.8	4.7	chr2	222862140	222862375	(19331154)	C	MIR	SINE/MIR	(3)	259	2	2233364
255	21.1	0.0	10.9	chr2	222863094	222863157	(19330372)	C	L2a	LINE/L2	(37)	3389	3333	2233366
3290	0.8	0.6	0.0	chr2	227034572	227034935	(15158594)	C	L1PA3	LINE/L1	(4)	6151	5786	2239814
425	24.0	19.7	1.1	chr2	230986658	230986834	(11206695)	+	L2a	LINE/L2	3208	3425	(1)	2246022
184	20.3	1.7	10.6	chr2	230986818	230986883	(11206646)	C	L2b	LINE/L2	(1)	3374	3315	2246023
333	29.6	6.6	1.6	chr2	231683112	231683255	(10510274)	+	MIRb	SINE/MIR	8	164	(104)	2247432
13	27.2	3.1	3.0	chr2	232633534	232633598	(9559931)	+	(CCGC)n	Simple_repeat	1	67	(0)	2249014
21	12.8	6.2	4.3	chr2	232633636	232633700	(9559829)	+	(CGCGTCC)n	Simple_repeat	1	69	(0)	2249015
21	18.8	3.3	7.5	chr2	232633795	232633885	(9559644)	+	(GCCCGA)n	Simple_repeat	1	94	(0)	2249016
182	31.5	2.7	0.0	chr2	237085499	237085571	(5107958)	C	L2b	LINE/L2	(13)	3362	3288	2255932
11	24.3	4.0	1.9	chr2	241102477	241102526	(1091003)	+	(GCCGCA)n	Simple_repeat	1	52	(0)	2260683
787	28.4	19.7	8.1	chr2	241145973	241146904	(1046625)	+	L1ME3F	LINE/L1	5169	6215	(28)	2260734
590	25.7	5.5	0.0	chr2	241147067	241147272	(1046257)	+	HAL1ME	LINE/L1	1929	2146	(319)	2260737
358	31.7	6.4	7.3	chr2	241965950	241966235	(227294)	+	MER65D	LTR/ERV1	162	444	(1)	2261906
624	26.4	15.0	0.5	chr2	241966343	241966701	(226828)	C	L1MEf	LINE/L1	(898)	5546	5139	2261907
14	33.7	1.4	0.0	chr20	324166	324235	(64119932)	+	(CCCCGCC)n	Simple_repeat	1	71	(0)	2262661
13	24.2	1.9	3.8	chr20	324509	324560	(64119607)	+	(CGCCC)n	Simple_repeat	1	53	(0)	2262662
1958	22.8	13.2	2.2	chr20	539679	540305	(63903862)	C	MLT1E2-int	LTR/ERVL-MaLR	(0)	1489	784	2263139
871	25.5	4.9	5.3	chr20	750743	751114	(63693053)	C	MLT1H	LTR/ERVL-MaLR	(162)	417	15	2263675
19	0.0	0.0	10.5	chr20	1183347	1183384	(63260783)	+	(AATG)n	Simple_repeat	1	38	(0)	2264561
222	34.9	4.4	2.7	chr20	1183572	1183683	(63260484)	C	MIRb	SINE/MIR	(16)	252	139	2264562
230	22.3	35.8	4.5	chr20	2101028	2101159	(62343008)	C	MIR	SINE/MIR	(14)	254	82	2266288
344	30.6	6.2	0.8	chr20	2101164	2101285	(62342882)	+	L2a	LINE/L2	3288	3416	(10)	2266283
305	29.1	2.7	6.2	chr20	2101420	2101593	(62342574)	C	MIRb	SINE/MIR	(69)	199	26	2266289
190	27.3	3.5	0.0	chr20	2315365	2315419	(62128748)	+	LFSINE_Vert	SINE/tRNA	4	60	(399)	2266725
2301	6.4	0.3	7.4	chr20	3160066	3160391	(61283776)	+	AluSx	SINE/Alu	3	305	(7)	2268330
2197	8.9	1.6	2.0	chr20	3926658	3926961	(60517206)	+	AluSx	SINE/Alu	1	303	(9)	2269796
16	18.1	0.0	0.0	chr20	9118707	9118739	(55325428)	+	(TGAA)n	Simple_repeat	1	33	(0)	2278421
2759	16.0	1.5	1.8	chr20	10783791	10784248	(53659919)	C	MER66B	LTR/ERV1	(29)	457	1	2281037
293	34.4	9.8	4.1	chr20	13200842	13201062	(51243105)	C	MIR1_Amn	SINE/MIR	(1)	261	30	2284528
2198	12.1	0.3	0.6	chr20	18430533	18430845	(46013322)	+	AluJb	SINE/Alu	1	312	(0)	2292652
31	12.3	1.8	0.0	chr20	20362795	20362849	(44081318)	+	(AGAG)n	Simple_repeat	1	56	(0)	2295535
295	35.6	8.0	0.0	chr20	21352731	21352834	(43091333)	C	MIR	SINE/MIR	(146)	116	4	2296990
186	28.4	6.9	0.0	chr20	21352866	21352932	(43091235)	+	MIRb	SINE/MIR	174	245	(23)	2296991
285	26.3	0.0	6.3	chr20	21809300	21809425	(42634742)	C	LTR16C	LTR/ERVL	(11)	478	361	2297628
15	29.5	1.6	3.2	chr20	26010143	26010203	(38433964)	+	(TG)n	Simple_repeat	1	62	(0)	2303100
1373	14.2	29.6	0.0	chr20	26010571	26010894	(38433273)	C	LTR46	LTR/ERV1	(0)	460	1	2303102
2785	14.8	15.7	1.9	chr20	26010895	26011290	(38432877)	+	LTR25	LTR/ERV1	355	779	(65)	2303101
1326	30.7	3.1	2.2	chr20	30540520	30540935	(33903232)	C	LTR33	LTR/ERVL	(2)	513	94	2305156
24	25.2	2.7	1.3	chr20	31514352	31514424	(32929743)	+	(GC)n	Simple_repeat	1	75	(0)	2306155
923	11.7	0.0	0.0	chr20	32287192	32287311	(32156856)	C	AluJo	SINE/Alu	(188)	124	5	2308113
1893	17.8	0.3	0.0	chr20	32287318	32287615	(32156552)	C	AluJr4	SINE/Alu	(8)	304	6	2308114
401	24.8	14.2	0.0	chr20	32357450	32357570	(32086597)	C	MIRb	SINE/MIR	(124)	144	4	2308297
230	6.8	12.0	0.0	chr20	32559082	32559125	(31885042)	+	L2c	LINE/L2	3115	3164	(223)	2308673
398	23.8	22.2	1.1	chr20	32559094	32559267	(31884900)	+	L2b	LINE/L2	3130	3350	(25)	2308674
340	23.7	2.6	0.0	chr20	32559322	32559397	(31884770)	+	L2b	LINE/L2	3290	3367	(8)	2308675
521	20.7	3.9	20.5	chr20	33401624	33401937	(31042230)	+	MER33	DNA/hAT-Charlie	14	267	(57)	2310618
356	21.3	0.0	0.0	chr20	35460452	35460512	(28983655)	C	MER102a	DNA/hAT-Charlie	(68)	262	202	2315335
294	21.2	3.6	5.9	chr20	35717560	35717644	(28726523)	+	L1MB8	LINE/L1	6058	6140	(38)	2315869
555	23.2	5.6	1.9	chr20	35717708	35717862	(28726305)	+	AluJb	SINE/Alu	136	296	(16)	2315870
2435	6.8	0.0	0.3	chr20	35717864	35718158	(28726009)	C	AluY	SINE/Alu	(17)	294	1	2315871
17	15.8	2.3	2.2	chr20	36051058	36051101	(28393066)	+	(GGAGTGG)n	Simple_repeat	1	45	(0)	2316726
996	25.4	13.8	2.6	chr20	36051234	36051650	(28392517)	C	L2a	LINE/L2	(0)	3426	2956	2316727
241	24.3	4.1	5.4	chr20	36584344	36584417	(27859750)	+	L2a	LINE/L2	3345	3417	(9)	2317946
2206	10.0	1.7	0.0	chr20	36584553	36584843	(27859324)	C	AluSx1	SINE/Alu	(16)	296	1	2317947
31	7.9	0.0	0.0	chr20	37406147	37406186	(27037981)	+	(GT)n	Simple_repeat	1	40	(0)	2319958
261	25.9	11.5	0.0	chr20	37688364	37688448	(26755719)	+	MIRb	SINE/MIR	43	138	(130)	2320591
439	29.3	1.7	0.8	chr20	37832474	37832590	(26611577)	C	MIRc	SINE/MIR	(119)	149	32	2320860
2421	9.1	0.0	0.0	chr20	38153243	38153549	(26290618)	+	AluSx	SINE/Alu	1	307	(5)	2321501
289	32.6	1.9	0.3	chr20	38153551	38153687	(26290480)	+	L1ME3G	LINE/L1	563	704	(2073)	2321502
1817	16.9	0.0	0.3	chr20	38454769	38455073	(25989094)	C	AluJb	SINE/Alu	(0)	312	1	2322201
20	13.2	0.0	0.0	chr20	38455074	38455096	(25989071)	+	(T)n	Simple_repeat	1	23	(0)	2322202
819	18.9	0.0	0.0	chr20	38455345	38455476	(25988691)	+	FLAM_A	SINE/Alu	1	132	(10)	2322203
3022	10.5	1.3	1.1	chr20	41058882	41059332	(23384835)	+	L1PA13	LINE/L1	5710	6161	(2)	2326980
327	29.7	6.9	9.8	chr20	41059333	41059394	(23384773)	+	L1ME2	LINE/L1	4922	4968	(1178)	2326979
56	0.0	0.0	0.0	chr20	41059410	41059459	(23384708)	+	(AAAT)n	Simple_repeat	1	50	(0)	2326981
533	23.7	0.0	0.0	chr20	41059467	41059563	(23384604)	+	FLAM_A	SINE/Alu	8	104	(38)	2326982
2784	21.6	8.0	3.2	chr20	41059613	41060602	(23383565)	+	L1ME2	LINE/L1	5054	6084	(80)	2326979
304	31.7	8.0	10.3	chr20	41340247	41340489	(23103678)	C	L2b	LINE/L2	(18)	3357	3121	2327403
20	14.7	2.1	2.1	chr20	41476495	41476541	(22967626)	+	(AACAA)n	Simple_repeat	1	48	(0)	2327602
1247	29.1	12.8	2.1	chr20	43542947	43543420	(20900747)	C	L3	LINE/CR1	(554)	3545	3014	2331397
184	25.0	17.9	0.0	chr20	44114442	44114505	(20329662)	+	L2c	LINE/L2	3297	3374	(1)	2332667
53	0.0	0.0	0.0	chr20	44114566	44114610	(20329557)	+	(GT)n	Simple_repeat	1	45	(0)	2332668
201	11.4	2.8	0.0	chr20	44475680	44475714	(19968453)	+	MIR3	SINE/MIR	104	139	(69)	2333612
227	16.2	0.0	0.0	chr20	44475684	44475720	(19968447)	+	MIRc	SINE/MIR	112	148	(120)	2333613
2755	21.7	5.7	2.7	chr20	45036199	45036898	(19407269)	+	MER44C	DNA/TcMar-Tigger	12	733	(0)	2334900
207	25.0	0.0	0.0	chr20	45290867	45290910	(19153257)	C	MIRb	SINE/MIR	(174)	94	51	2335317
12	22.0	2.7	0.0	chr20	45934710	45934746	(18509421)	+	(GGAGGC)n	Simple_repeat	1	38	(0)	2336591
24	30.0	4.6	0.9	chr20	46192501	46192608	(18251559)	+	GA-rich	Low_complexity	1	113	(0)	2337140
663	23.6	9.9	0.0	chr20	47844487	47844677	(16599490)	+	L2a	LINE/L2	3198	3409	(17)	2340966
232	26.8	8.6	3.0	chr20	47844654	47844784	(16599383)	C	L2a	LINE/L2	(255)	3171	3033	2340970
1128	27.1	9.7	1.7	chr20	48199803	48200274	(16243893)	C	L2a	LINE/L2	(2)	3424	2911	2341646
604	26.2	9.9	0.0	chr20	48487483	48487673	(15956494)	+	L2a	LINE/L2	3198	3409	(17)	2342203
255	35.3	1.2	0.0	chr20	49449985	49450069	(14994098)	+	MIRc	SINE/MIR	40	125	(143)	2344454
1460	13.4	13.9	3.0	chr20	49625405	49625666	(14818501)	C	AluJr	SINE/Alu	(17)	295	1	2344922
677	16.2	12.3	6.6	chr20	49625985	49626136	(14818031)	+	MER58A	DNA/hAT-Charlie	1	162	(62)	2344923
2150	12.8	0.0	0.0	chr20	49730214	49730510	(14713657)	+	AluSx1	SINE/Alu	2	298	(14)	2345151
191	32.0	8.1	2.3	chr20	50154234	50154361	(14289806)	C	L2b	LINE/L2	(29)	3346	3211	2346211
228	31.3	0.8	0.6	chr20	50268260	50268358	(14175809)	+	MIR	SINE/MIR	148	247	(21)	2346512
551	27.5	15.0	2.9	chr20	50284302	50284645	(14159522)	+	L2b	LINE/L2	2969	3361	(14)	2346547
35	2.8	0.0	0.0	chr20	50284648	50284684	(14159483)	+	(GAAT)n	Simple_repeat	1	37	(0)	2346548
12	12.4	8.6	0.0	chr20	50284809	50284843	(14159324)	+	(TGCTGCC)n	Simple_repeat	1	38	(0)	2346549
710	29.9	3.6	9.4	chr20	50383028	50383396	(14060771)	C	MLT1J	LTR/ERVL-MaLR	(164)	348	1	2346778
349	32.1	2.2	3.7	chr20	50383397	50383532	(14060635)	C	MLT1H	LTR/ERVL-MaLR	(109)	501	368	2346780
326	30.5	4.3	0.7	chr20	50423539	50423680	(14020487)	C	MIRc	SINE/MIR	(49)	159	16	2346884
664	25.4	14.2	0.0	chr20	50456900	50457080	(13987087)	+	MIR	SINE/MIR	48	258	(4)	2346985
1754	18.6	1.6	2.4	chr20	50457208	50457576	(13986591)	C	MER47A	DNA/TcMar-Tigger	(0)	366	1	2346986
333	29.9	7.0	6.6	chr20	50504136	50504378	(13939789)	C	L2a	LINE/L2	(64)	3362	3119	2347125
1017	17.8	1.4	10.1	chr20	50570671	50570907	(13873260)	C	MER20	DNA/hAT-Charlie	(3)	216	1	2347227
19	19.2	5.5	1.7	chr20	50731396	50731450	(13712717)	+	(GC)n	Simple_repeat	1	58	(0)	2347595
635	27.8	6.0	7.9	chr20	53610070	53610460	(10833707)	+	L1ME4c	LINE/L1	272	654	(176)	2353853
251	25.2	15.3	2.3	chr20	53741551	53741680	(10702487)	C	MIR	SINE/MIR	(1)	261	112	2354225
590	24.7	15.9	0.0	chr20	53741721	53741894	(10702273)	+	MER58A	DNA/hAT-Charlie	1	207	(17)	2354226
241	27.9	12.7	0.0	chr20	56359363	56359471	(8084696)	C	MIR3	SINE/MIR	(56)	152	33	2358877
355	23.9	13.7	4.1	chr20	56359556	56359825	(8084342)	+	MER113	DNA/hAT-Charlie	176	475	(46)	2358878
387	32.0	10.5	6.3	chr20	57248408	57248771	(7195396)	+	MLT1L	LTR/ERVL-MaLR	212	592	(18)	2360835
2136	7.8	0.0	1.1	chr20	57248778	57249099	(7195068)	C	AluY	SINE/Alu	(0)	311	2	2360836
296	36.4	7.1	0.0	chr20	57280271	57280388	(7163779)	+	L2b	LINE/L2	3249	3375	(0)	2360899
265	34.9	9.1	1.3	chr20	59835049	59835171	(4608996)	+	L2a	LINE/L2	3300	3425	(1)	2365106
1448	24.7	4.2	6.5	chr20	60135054	60135512	(4308655)	+	MER101	LTR/ERV1	11	458	(16)	2365541
310	30.3	2.3	0.5	chr20	63056910	63057442	(1386725)	+	(TCAT)n	Simple_repeat	1	546	(0)	2369232
1521	30.1	5.5	2.1	chr20	63434467	63435083	(1009084)	C	L1MB5	LINE/L1	(36)	6138	5500	2369568
1732	17.4	4.6	0.0	chr20	63435120	63435407	(1008760)	+	AluJb	SINE/Alu	1	302	(10)	2369569
140	22.1	1.6	0.3	chr20	63543746	63544064	(900103)	+	(ATGA)n	Simple_repeat	1	324	(0)	2369688
200	26.2	6.2	0.0	chr20	63658031	63658091	(786076)	C	L2c	LINE/L2	(685)	2734	2670	2369855
3208	10.1	3.2	0.2	chr20	64254837	64255294	(188873)	C	MER4A1	LTR/ERV1	(0)	472	1	2370629
504	17.2	0.0	1.1	chr21	17454673	17454759	(29255224)	C	AluSp	SINE/Alu	(13)	300	215	2381627
14	14.0	2.1	8.2	chr21	26844279	26844326	(19865657)	+	(CTTCGT)n	Simple_repeat	1	49	(0)	2394581
355	27.4	1.9	2.8	chr21	29344096	29344204	(17365779)	C	Charlie24	DNA/hAT-Charlie	(0)	2450	2343	2398159
1703	16.2	0.0	0.8	chr21	31521471	31521736	(15188247)	+	AluJr	SINE/Alu	18	281	(31)	2401522
44	2.4	0.0	0.0	chr21	31521737	31521778	(15188205)	+	(CA)n	Simple_repeat	1	42	(0)	2401523
333	15.6	5.9	0.0	chr21	31521807	31521870	(15188113)	C	Alu	SINE/Alu	(8)	293	226	2401524
2389	7.2	0.0	0.0	chr21	31521878	31522170	(15187813)	C	AluY	SINE/Alu	(18)	293	1	2401525
13	8.9	10.5	2.4	chr21	31558695	31558732	(15151251)	+	(CCT)n	Simple_repeat	1	42	(0)	2401594
14	22.1	2.0	3.9	chr21	32727802	32727852	(13982131)	+	(CTCCCG)n	Simple_repeat	1	52	(0)	2403671
152	2.8	0.0	0.0	chr21	32771844	32771990	(13937993)	+	(GA)n	Simple_repeat	1	147	(0)	2403728
12	23.7	2.5	0.0	chr21	32772205	32772244	(13937739)	+	GA-rich	Low_complexity	1	41	(0)	2403729
16	17.2	7.4	1.7	chr21	33230305	33230358	(13479625)	+	(TCC)n	Simple_repeat	1	58	(0)	2404551
1614	12.2	14.8	0.4	chr21	33325596	33326018	(13383965)	C	LTR34	LTR/ERV1	(13)	686	2	2404728
17	17.0	2.0	3.9	chr21	33543503	33543552	(13166431)	+	(CCTCCG)n	Simple_repeat	1	51	(0)	2405206
33	22.6	1.6	6.2	chr21	33642406	33642532	(13067451)	+	G-rich	Low_complexity	1	129	(0)	2405359
13	25.8	1.9	3.6	chr21	33642732	33642785	(13067198)	+	(GGC)n	Simple_repeat	1	55	(0)	2405360
13	27.3	0.0	3.6	chr21	33642812	33642867	(13067116)	+	(CGCCCCG)n	Simple_repeat	1	56	(0)	2405361
532	34.4	3.2	3.4	chr21	33817211	33817589	(12892394)	+	L2c	LINE/L2	2922	3299	(88)	2405673
185	23.7	10.6	6.2	chr21	33817657	33817737	(12892246)	+	L2c	LINE/L2	3299	3383	(4)	2405674
53	0.0	0.0	0.0	chr21	34202389	34202433	(12507550)	+	(GT)n	Simple_repeat	1	45	(0)	2406265
18	4.8	0.0	0.0	chr21	34202434	34202455	(12507528)	+	(AG)n	Simple_repeat	1	22	(0)	2406266
27	6.1	0.0	0.0	chr21	34844583	34844617	(11865366)	+	(TGAATGAG)n	Simple_repeat	1	35	(0)	2407245
39	13.3	4.0	0.0	chr21	35047477	35047514	(11662469)	+	(TC)n	Simple_repeat	1	41	(0)	2407529
56	0.0	0.0	0.0	chr21	35047515	35047562	(11662421)	+	(AC)n	Simple_repeat	1	48	(0)	2407530
39	13.3	4.0	0.0	chr21	35047563	35047598	(11662385)	+	(TC)n	Simple_repeat	2	37	(0)	2407531
60	0.0	0.0	0.0	chr21	36289425	36289475	(10420508)	+	(GT)n	Simple_repeat	1	51	(0)	2409533
2336	10.1	0.0	0.7	chr21	36329011	36329317	(10380666)	+	AluSx1	SINE/Alu	1	305	(7)	2409633
985	10.5	0.0	26.6	chr21	36329318	36329399	(10380584)	C	MER30	DNA/hAT-Charlie	(150)	80	1	2409632
417	24.1	4.2	1.1	chr21	36329400	36329516	(10380467)	+	MER21C	LTR/ERVL	554	703	(235)	2409629
2866	16.8	2.6	4.7	chr21	36329559	36329850	(10380133)	+	MER4E	LTR/ERV1	1	277	(504)	2409634
208	25.0	1.4	5.6	chr21	36385070	36385141	(10324842)	+	L2b	LINE/L2	3307	3375	(0)	2409762
16	3.5	0.0	10.8	chr21	36385150	36385186	(10324797)	+	(AAT)n	Simple_repeat	1	37	(0)	2409763
2607	19.8	5.1	0.8	chr21	37000413	37000976	(9709007)	+	L1MB3	LINE/L1	5593	6183	(0)	2410832
16	11.7	3.6	0.0	chr21	37073463	37073490	(9636493)	+	(GT)n	Simple_repeat	1	29	(0)	2410978
2169	15.3	9.3	0.2	chr21	37145599	37145991	(9563992)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	2411080
3456	16.1	9.9	11.6	chr21	37145992	37146155	(9563828)	+	L1MB7	LINE/L1	5617	5823	(360)	2411079
619	15.6	0.0	0.0	chr21	37146156	37146245	(9563738)	+	AluJb	SINE/Alu	202	291	(21)	2411081
1467	12.4	2.5	3.3	chr21	37484011	37484251	(9225732)	+	MER1B	DNA/hAT-Charlie	57	295	(44)	2411672
60	22.7	2.3	5.4	chr21	38805637	38805854	(7904129)	+	(CCCCT)n	Simple_repeat	1	223	(0)	2413543
28	3.3	0.0	0.0	chr21	38805860	38805890	(7904093)	+	(TCCCTCC)n	Simple_repeat	1	31	(0)	2413544
13	10.7	3.1	3.0	chr21	38990198	38990229	(7719754)	+	GA-rich	Low_complexity	1	33	(0)	2413824
821	13.8	0.0	0.0	chr21	39183687	39183802	(7526181)	C	AluJo	SINE/Alu	(196)	116	1	2414126
2225	10.0	0.0	0.0	chr21	41467107	41467405	(5242578)	+	AluSx	SINE/Alu	1	299	(13)	2417492
2526	9.4	6.5	3.8	chr21	41783544	41783964	(4926019)	+	LTR3B	LTR/ERVK	1	433	(4)	2417996
12	20.7	0.0	2.9	chr21	41877226	41877260	(4832723)	+	(CCTT)n	Simple_repeat	1	35	(0)	2418112
15	17.5	0.0	0.0	chr21	41877404	41877435	(4832548)	+	(GAAT)n	Simple_repeat	1	32	(0)	2418113
223	28.6	5.6	2.3	chr21	41877441	41877526	(4832457)	C	MIRc	SINE/MIR	(77)	191	103	2418114
2458	10.7	0.5	3.1	chr21	42201069	42201495	(4508488)	C	Charlie3	DNA/hAT-Charlie	(2238)	468	6	2418582
133	15.6	11.9	5.1	chr21	42670034	42670824	(4039159)	+	(TTCACAC)n	Simple_repeat	1	885	(0)	2419161
1553	14.0	2.8	16.3	chr21	42789329	42789745	(3920238)	+	L1PA16	LINE/L1	5808	6166	(0)	2419327
234	34.3	6.2	2.4	chr21	43586164	43586333	(3123650)	+	Plat_L3	LINE/CR1	3047	3223	(363)	2420461
185	28.9	1.9	0.0	chr21	43586399	43586450	(3123533)	+	L3b	LINE/CR1	4950	5002	(230)	2420462
32	2.9	0.0	0.0	chr21	43718829	43718863	(2991120)	+	(GCGGGGC)n	Simple_repeat	1	35	(0)	2420694
19	13.0	0.0	0.0	chr21	43718877	43718910	(2991073)	+	(AATG)n	Simple_repeat	1	34	(0)	2420695
13	19.5	0.0	2.7	chr21	43719258	43719294	(2990689)	+	(CCCGG)n	Simple_repeat	1	37	(0)	2420697
14	18.2	0.0	0.0	chr21	43728590	43728620	(2981363)	+	(TGTC)n	Simple_repeat	1	31	(0)	2420708
419	16.5	8.1	2.6	chr21	43958234	43959528	(2750455)	+	(GT)n	Simple_repeat	1	1400	(0)	2421097
191	30.9	1.9	0.0	chr21	45507964	45508543	(1201440)	+	(GGTG)n	Simple_repeat	1	591	(0)	2422900
235	22.1	3.4	5.5	chr21	46323663	46323753	(386230)	+	LTR16A	LTR/ERVL	135	223	(228)	2423811
12	17.7	1.2	13.1	chr21	46635981	46636063	(73920)	+	(CGCCCA)n	Simple_repeat	1	84	(0)	2424209
205	34.7	4.8	2.0	chr22	17158437	17158536	(33659932)	+	MIRb	SINE/MIR	34	136	(132)	2428338
196	29.6	7.4	6.7	chr22	17266279	17266412	(33552056)	+	AmnSINE1	SINE/5S-Deu-L2	184	318	(257)	2428604
1799	14.8	3.6	1.0	chr22	17479762	17480059	(33338409)	C	AluJr4	SINE/Alu	(6)	306	1	2429082
28	20.2	0.0	1.5	chr22	20164782	20164846	(30653622)	+	G-rich	Low_complexity	1	65	(0)	2432972
113	29.2	1.3	4.4	chr22	20496137	20496610	(30321858)	+	(TCCC)n	Simple_repeat	1	480	(0)	2433428
12	19.6	2.9	0.0	chr22	20916855	20916889	(29901579)	+	(TCACTC)n	Simple_repeat	1	36	(0)	2434226
1975	14.6	3.3	0.3	chr22	20936857	20937151	(29881317)	C	AluSx1	SINE/Alu	(8)	304	1	2434273
2181	9.8	0.0	0.0	chr22	21567166	21567462	(29251006)	C	AluSx3	SINE/Alu	(14)	297	1	2435441
260	17.0	0.0	0.0	chr22	21567469	21567515	(29250953)	C	L2a	LINE/L2	(5)	3421	3375	2435442
249	31.0	0.0	3.9	chr22	21567526	21567629	(29250839)	+	L2b	LINE/L2	3250	3349	(26)	2435437
2053	12.8	0.3	0.7	chr22	21608421	21608724	(29209744)	C	AluSz	SINE/Alu	(9)	303	1	2435528
1276	18.8	0.7	9.6	chr22	21608725	21608881	(29209587)	C	AluJr	SINE/Alu	(179)	133	1	2435527
2327	6.9	0.0	1.0	chr22	21608893	21609196	(29209272)	C	AluYk4	SINE/Alu	(10)	301	1	2435529
200	23.3	0.0	0.0	chr22	21734704	21734746	(29083722)	+	L2b	LINE/L2	3320	3362	(13)	2435782
214	31.6	3.3	4.9	chr22	21734768	21734890	(29083578)	C	L2c	LINE/L2	(221)	3166	3046	2435783
12	21.2	2.5	2.4	chr22	21867954	21867993	(28950475)	+	(GCGA)n	Simple_repeat	1	41	(0)	2436082
23	24.5	0.0	1.5	chr22	23380535	23380599	(27437869)	+	(CTGCCC)n	Simple_repeat	1	65	(0)	2438219
205	31.4	0.0	0.0	chr22	23517960	23518010	(27300458)	+	L2b	LINE/L2	3322	3372	(3)	2438424
40	0.0	0.0	0.0	chr22	23518124	23518160	(27300308)	+	(GGAT)n	Simple_repeat	1	37	(0)	2438425
1183	8.0	3.3	6.9	chr22	24010696	24010884	(26807584)	+	MER30	DNA/hAT-Charlie	47	228	(2)	2439357
57	3.6	0.0	0.0	chr22	24011077	24011134	(26807334)	+	(AC)n	Simple_repeat	1	58	(0)	2439358
26	18.8	2.0	0.0	chr22	24011135	24011185	(26807283)	+	(GC)n	Simple_repeat	1	52	(0)	2439359
246	22.4	3.9	0.0	chr22	24727227	24727275	(26091193)	+	MLT1E2	LTR/ERVL-MaLR	93	143	(510)	2440540
910	28.2	13.2	1.5	chr22	24727318	24727481	(26090987)	+	MLT1E2	LTR/ERVL-MaLR	159	352	(275)	2440540
1099	21.6	11.5	4.8	chr22	24728885	24729357	(26089111)	+	MER61F	LTR/ERV1	1	639	(37)	2440543
685	27.1	11.4	9.7	chr22	24894424	24894838	(25923630)	C	MLT1H	LTR/ERVL-MaLR	(2)	547	65	2440926
233	30.3	7.7	1.6	chr22	25024716	25024834	(25793634)	C	L2a	LINE/L2	(0)	3426	3236	2441273
216	26.0	0.0	0.0	chr22	25024992	25025041	(25793427)	C	L2a	LINE/L2	(300)	3075	3026	2441273
209	17.9	0.0	0.0	chr22	25027351	25027389	(25791079)	+	MIR	SINE/MIR	80	118	(144)	2441279
386	27.8	8.6	0.4	chr22	25027508	25027660	(25790808)	+	MIRc	SINE/MIR	23	182	(48)	2441280
659	21.9	0.7	0.0	chr22	25449265	25449410	(25369058)	C	L1M3	LINE/L1	(1118)	5022	4876	2442212
1202	24.9	1.2	3.8	chr22	25449427	25449520	(25368948)	C	L1M3	LINE/L1	(640)	5672	5581	2442213
2355	9.5	0.0	0.0	chr22	25449521	25449816	(25368652)	C	AluSc8	SINE/Alu	(15)	296	1	2442214
1356	14.9	13.8	1.6	chr22	25930506	25930753	(24887715)	C	AluJb	SINE/Alu	(9)	303	21	2443182
21	32.6	2.5	2.4	chr22	26883367	26883486	(23934982)	+	(CAACT)n	Simple_repeat	1	123	(0)	2445384
13	23.2	0.0	4.4	chr22	27212578	27212622	(23605846)	+	A-rich	Low_complexity	1	45	(0)	2446213
462	28.1	7.0	0.6	chr22	29343664	29343824	(21474644)	+	MIRb	SINE/MIR	40	211	(57)	2450351
2373	9.4	0.3	0.0	chr22	29343829	29344135	(21474333)	+	AluSq10	SINE/Alu	1	308	(5)	2450352
26	0.0	0.0	0.0	chr22	29838204	29838228	(20980240)	+	(GCC)n	Simple_repeat	1	25	(0)	2451452
2188	22.3	6.0	7.7	chr22	29843080	29843143	(20975325)	C	MLT1F	LTR/ERVL-MaLR	(0)	548	486	2451467
17	25.9	3.3	0.0	chr22	30196446	30196505	(20621963)	+	(CGCCAT)n	Simple_repeat	1	62	(0)	2452112
16	16.0	7.0	0.0	chr22	30246294	30246336	(20572132)	+	A-rich	Low_complexity	1	46	(0)	2452227
32	8.3	1.9	1.8	chr22	30246390	30246443	(20572025)	+	(GGA)n	Simple_repeat	1	55	(0)	2452228
453	24.8	8.7	0.7	chr22	30356405	30356542	(20461926)	C	MER5A1	DNA/hAT-Charlie	(0)	166	17	2452430
367	30.4	5.0	3.7	chr22	31231054	31231286	(19587182)	+	MIRc	SINE/MIR	18	251	(17)	2454316
198	25.9	8.1	3.1	chr22	31490358	31490442	(19328026)	+	MIR	SINE/MIR	50	150	(118)	2454896
193	25.6	0.0	0.0	chr22	31662518	31662560	(19155908)	C	MIR3	SINE/MIR	(46)	162	120	2455316
15	5.6	0.0	0.0	chr22	35894979	35894997	(14923471)	+	(A)n	Simple_repeat	1	19	(0)	2463926
17	12.8	0.0	2.8	chr22	35895042	35895077	(14923391)	+	(TCCC)n	Simple_repeat	1	36	(0)	2463927
32	3.2	0.0	0.0	chr22	35895078	35895109	(14923359)	+	(CT)n	Simple_repeat	1	32	(0)	2463928
2074	28.5	21.1	3.6	chr22	35902956	35904342	(14914126)	+	L2c	LINE/L2	1487	3285	(102)	2463943
2406	7.8	0.0	3.7	chr22	36411189	36411509	(14406959)	+	AluY	SINE/Alu	2	310	(1)	2464959
1721	14.6	1.4	7.0	chr22	36411510	36411626	(14406842)	C	AluJb	SINE/Alu	(213)	99	1	2464958
425	26.9	10.7	6.3	chr22	36411627	36411663	(14406805)	+	MIRb	SINE/MIR	211	241	(27)	2464957
262	32.3	7.5	0.0	chr22	36411705	36411828	(14406640)	+	MIRc	SINE/MIR	121	254	(14)	2464960
382	33.5	4.6	2.3	chr22	37199675	37199845	(13618623)	C	MIRb	SINE/MIR	(82)	186	12	2466701
329	27.5	5.3	2.4	chr22	37229313	37229491	(13588977)	+	MIRb	SINE/MIR	8	194	(74)	2466758
485	27.5	1.1	7.1	chr22	37229765	37229933	(13588535)	C	MIR3	SINE/MIR	(24)	184	27	2466759
13	21.1	0.0	2.5	chr22	37686622	37686661	(13131807)	+	(TTCTCCC)n	Simple_repeat	1	40	(0)	2467835
2038	12.7	1.4	1.4	chr22	37749069	37749359	(13069109)	+	AluSx1	SINE/Alu	1	291	(21)	2467975
1770	17.6	0.3	2.7	chr22	37749665	37749965	(13068503)	+	AluJo	SINE/Alu	1	294	(18)	2467976
2235	6.2	0.4	2.4	chr22	37848993	37849280	(12969188)	C	AluSp	SINE/Alu	(20)	293	12	2468218
313	35.2	0.8	3.0	chr22	37954040	37954171	(12864297)	C	L2c	LINE/L2	(6)	3381	3253	2468495
249	29.1	10.3	5.7	chr22	38177766	38177922	(12640546)	C	MIR	SINE/MIR	(65)	197	33	2468964
17	25.9	1.4	4.2	chr22	38317669	38317738	(12500730)	+	G-rich	Low_complexity	1	71	(0)	2469245
272	22.0	9.9	0.9	chr22	38504765	38504874	(12313594)	C	MIRb	SINE/MIR	(59)	209	89	2469634
2178	8.9	0.7	0.0	chr22	38504928	38505208	(12313260)	C	AluSp	SINE/Alu	(30)	283	1	2469635
447	30.2	16.2	0.5	chr22	38697631	38697843	(12120625)	+	MIR	SINE/MIR	6	258	(4)	2470128
189	29.0	6.8	5.5	chr22	38697926	38697998	(12120470)	+	MIRb	SINE/MIR	63	136	(132)	2470129
216	28.9	3.7	13.3	chr22	39236203	39236382	(11582086)	C	MIRb	SINE/MIR	(72)	196	28	2471176
288	26.6	9.6	0.0	chr22	39237724	39237836	(11580632)	+	MIR3	SINE/MIR	30	154	(54)	2471177
710	30.7	5.5	4.5	chr22	39531892	39532288	(11286180)	+	L2b	LINE/L2	2951	3356	(31)	2471833
12	0.0	0.0	8.3	chr22	40636245	40636268	(10182200)	+	(CGCC)n	Simple_repeat	1	24	(0)	2473971
1735	13.8	0.0	12.7	chr22	40711464	40711683	(10106785)	+	AluJr4	SINE/Alu	123	303	(9)	2474168
257	27.6	18.1	1.6	chr22	40711687	40711870	(10106598)	+	LTR81A	LTR/Gypsy	933	1153	(0)	2474166
16	0.0	0.0	0.0	chr22	40856967	40856984	(9961484)	+	(A)n	Simple_repeat	1	18	(0)	2474500
15	19.6	0.0	0.0	chr22	41091811	41091839	(9726629)	+	GA-rich	Low_complexity	1	29	(0)	2475138
1310	19.6	8.6	1.5	chr22	41120726	41120996	(9697472)	C	AluJr	SINE/Alu	(20)	292	1	2475202
686	20.4	0.0	0.0	chr22	41121015	41121139	(9697329)	+	FLAM_C	SINE/Alu	6	218	(84)	2475203
589	33.6	0.9	3.1	chr22	41262348	41262574	(9555894)	C	MIRb	SINE/MIR	(6)	262	41	2475494
2360	8.5	0.3	0.3	chr22	41413149	41413454	(9405014)	+	AluSp	SINE/Alu	1	306	(7)	2475854
26	20.5	0.0	0.0	chr22	41413576	41413631	(9404837)	+	GA-rich	Low_complexity	1	56	(0)	2475855
32	5.3	0.0	0.0	chr22	41544351	41544389	(9274079)	+	(CGCCA)n	Simple_repeat	1	39	(0)	2476153
22	17.4	5.2	0.0	chr22	41544391	41544448	(9274020)	+	(CGCACCA)n	Simple_repeat	1	61	(0)	2476154
345	29.2	12.2	6.0	chr22	42301275	42301692	(8516776)	C	L2c	LINE/L2	(0)	3387	2947	2477755
2338	11.3	0.0	0.0	chr22	42313591	42313899	(8504569)	C	AluSz	SINE/Alu	(3)	309	1	2477779
337	20.8	0.0	4.3	chr22	42313910	42314016	(8504452)	+	L2a	LINE/L2	3025	3126	(249)	2477780
203	30.7	1.1	6.4	chr22	42314007	42314100	(8504368)	+	L2a	LINE/L2	3265	3353	(22)	2477780
2353	10.1	1.6	0.0	chr22	42322894	42323201	(8495267)	C	AluSp	SINE/Alu	(0)	313	1	2477800
387	30.2	12.1	2.2	chr22	42362521	42362752	(8455716)	+	MIR	SINE/MIR	1	251	(11)	2477887
350	28.3	0.0	3.8	chr22	42365876	42365996	(8452472)	C	MIRc	SINE/MIR	(71)	159	50	2477893
677	32.0	4.7	1.9	chr22	42620740	42621051	(8197417)	+	L4_A_Mam	LINE/RTE-X	4668	4988	(2)	2478509
2598	7.1	0.0	0.0	chr22	42790375	42790685	(8027783)	+	AluY	SINE/Alu	1	311	(0)	2478953
1129	24.2	9.8	1.7	chr22	42965064	42965420	(7853048)	+	L1ME1	LINE/L1	5777	6165	(14)	2479271
2340	7.5	0.0	1.4	chr22	42987528	42987821	(7830647)	C	AluSc8	SINE/Alu	(9)	302	13	2479319
2175	12.5	1.3	0.0	chr22	42987859	42988154	(7830314)	+	AluSz	SINE/Alu	1	300	(12)	2479320
2239	5.6	0.0	1.1	chr22	43024688	43024955	(7793513)	C	AluY	SINE/Alu	(13)	298	34	2479398
12	4.7	0.0	7.7	chr22	43025246	43025271	(7793197)	+	(GCCT)n	Simple_repeat	1	26	(0)	2479399
180	22.2	11.3	6.0	chr22	43295764	43295830	(7522638)	C	L2b	LINE/L2	(0)	3375	3305	2479947
12	15.8	0.0	3.3	chr22	43295983	43296012	(7522456)	+	G-rich	Low_complexity	1	30	(0)	2479948
382	34.8	9.0	4.2	chr22	43330334	43330597	(7487871)	+	L2c	LINE/L2	3100	3377	(10)	2480016
246	16.7	9.1	3.2	chr22	43330609	43330670	(7487798)	C	MIR3	SINE/MIR	(48)	160	95	2480017
2042	13.1	0.7	2.9	chr22	44866995	44867306	(5951162)	+	AluSq2	SINE/Alu	2	306	(7)	2482815
619	26.8	9.1	0.0	chr22	45223380	45223569	(5594899)	+	MIR	SINE/MIR	35	243	(19)	2483475
314	28.6	5.9	3.5	chr22	45686288	45686403	(5132065)	C	L2c	LINE/L2	(9)	3378	3260	2484388
465	10.9	8.3	1.7	chr22	45979405	45980445	(4838023)	+	(CA)n	Simple_repeat	1	1127	(0)	2484826
13	21.0	0.0	7.7	chr22	46053863	46053914	(4764554)	+	G-rich	Low_complexity	1	52	(0)	2484960
12	20.2	0.0	6.7	chr22	46054030	46054074	(4764394)	+	(AGGC)n	Simple_repeat	1	45	(0)	2484961
2857	25.6	5.8	2.4	chr22	46360010	46360991	(4457477)	+	L1MEf	LINE/L1	179	1195	(5005)	2485426
12	13.6	2.8	5.4	chr22	49853226	49853261	(965207)	+	(CGCCC)n	Simple_repeat	1	37	(0)	2489842
546	21.8	29.2	4.0	chr22	50342271	50342602	(475866)	C	LTR41	LTR/ERVL	(308)	460	5	2490487
771	28.4	0.6	0.0	chr22	50694192	50694374	(124094)	+	MER58A	DNA/hAT-Charlie	41	224	(0)	2491092
260	31.9	7.8	0.8	chr3	357077	357196	(197938363)	C	MIRc	SINE/MIR	(125)	143	15	2492898
30	17.1	3.0	0.0	chr3	5122066	5122131	(193173428)	+	(AATG)n	Simple_repeat	1	68	(0)	2500268
472	27.9	10.5	1.3	chr3	9194592	9194747	(189100812)	C	MIR3	SINE/MIR	(22)	186	15	2506699
1062	26.0	4.4	6.5	chr3	9194824	9194970	(189100589)	+	LTR16A1	LTR/ERVL	18	159	(297)	2506700
30	26.0	0.0	2.3	chr3	9731741	9731827	(188563732)	+	(CGC)n	Simple_repeat	1	87	(0)	2507838
210	29.5	16.8	4.7	chr3	10026799	10026926	(188268633)	+	MIRb	SINE/MIR	119	261	(1)	2508499
66	2.9	1.4	0.0	chr3	10224728	10224798	(188070761)	+	(CCAT)n	Simple_repeat	1	72	(0)	2508974
338	32.2	1.7	3.4	chr3	12423221	12423397	(185872162)	C	Charlie22a	DNA/hAT-Charlie	(317)	174	1	2513232
332	28.8	3.1	3.4	chr3	12444853	12444982	(185850577)	+	MIRc	SINE/MIR	111	230	(38)	2513265
2479	7.0	0.0	0.3	chr3	12631317	12631618	(185663941)	+	AluY	SINE/Alu	1	301	(10)	2513680
215	26.1	0.0	0.0	chr3	12631632	12631677	(185663882)	+	MIRb	SINE/MIR	198	243	(25)	2513681
348	36.5	4.0	0.7	chr3	12631679	12631824	(185663735)	+	MER91A	DNA/hAT-Tip100	14	164	(32)	2513682
623	26.4	11.5	0.4	chr3	13650226	13650472	(184645087)	C	L2c	LINE/L2	(79)	3308	3031	2515680
43	0.0	0.0	0.0	chr3	14268564	14268600	(184026959)	+	(TG)n	Simple_repeat	1	37	(0)	2516570
2188	15.1	3.8	0.6	chr3	14268793	14269145	(184026414)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	2516571
651	30.4	1.0	1.0	chr3	14372358	14372550	(183923009)	C	MIR	SINE/MIR	(60)	202	10	2516798
278	29.1	3.4	0.0	chr3	14372547	14372649	(183922910)	C	MIRc	SINE/MIR	(94)	168	63	2516799
185	21.4	4.5	0.0	chr3	14372638	14372679	(183922880)	+	L2c	LINE/L2	3317	3360	(15)	2516790
394	27.4	8.1	7.4	chr3	14860991	14861186	(183434373)	+	MER113A	DNA/hAT-Charlie	120	312	(2)	2517736
286	27.9	14.8	0.0	chr3	14861313	14861416	(183434143)	C	MIRb	SINE/MIR	(138)	130	9	2517738
406	30.1	8.5	1.1	chr3	14911634	14911808	(183383751)	C	L2c	LINE/L2	(14)	3373	3185	2517841
6078	14.8	7.6	0.8	chr3	15207030	15208174	(183087385)	C	Tigger3b	DNA/TcMar-Tigger	(0)	1231	2	2518368
982	32.8	6.9	1.9	chr3	17730256	17730736	(180564823)	+	MLT1G1	LTR/ERVL-MaLR	73	579	(0)	2522279
18	6.4	2.7	5.3	chr3	17742520	17742559	(180553000)	+	(TCC)n	Simple_repeat	1	38	(0)	2522304
17	0.0	0.0	0.0	chr3	18436507	18436525	(179859034)	+	(A)n	Simple_repeat	1	19	(0)	2523285
18	17.9	0.0	0.0	chr3	20039916	20039954	(178255605)	+	(CCCCCA)n	Simple_repeat	1	39	(0)	2525554
14	9.6	0.0	0.0	chr3	20040191	20040213	(178255346)	+	(GGC)n	Simple_repeat	1	23	(0)	2525555
870	20.4	9.2	0.0	chr3	23836972	23837187	(174458372)	+	MIR	SINE/MIR	4	241	(21)	2530863
472	26.4	1.1	3.8	chr3	23837181	23837340	(174458219)	C	MIR	SINE/MIR	(47)	183	33	2530864
31	0.0	2.9	2.8	chr3	24487336	24487370	(173808189)	+	(AC)n	Simple_repeat	1	36	(0)	2531954
254	26.6	16.8	0.8	chr3	24487380	24487504	(173808055)	C	MER103C	DNA/hAT-Charlie	(67)	230	82	2531955
384	29.6	1.9	7.3	chr3	24688851	24689014	(173606545)	+	L2b	LINE/L2	3207	3361	(14)	2532252
341	14.6	0.0	0.0	chr3	25153725	25153772	(173141787)	C	AluYk11	SINE/Alu	(263)	48	1	2532941
286	7.8	8.9	0.0	chr3	25153774	25153824	(173141735)	C	L1MA1	LINE/L1	(354)	5948	5893	2532942
1773	21.4	8.5	1.0	chr3	29600212	29600603	(168694956)	+	MSTB1	LTR/ERVL-MaLR	9	432	(0)	2539404
778	16.5	0.8	1.6	chr3	37451498	37451626	(160843933)	C	MER5A	DNA/hAT-Charlie	(61)	128	1	2551604
18	23.1	4.0	3.8	chr3	37452044	37452119	(160843440)	+	(CGC)n	Simple_repeat	1	79	(0)	2551605
20	18.4	0.0	0.0	chr3	37944959	37945001	(160350558)	+	(TTAG)n	Simple_repeat	1	43	(0)	2552310
266	29.2	17.2	4.7	chr3	37974868	37975165	(160320394)	C	L2b	LINE/L2	(2)	3373	3031	2552352
233	9.4	0.0	0.0	chr3	37993239	37993270	(160302289)	C	MamRTE1	LINE/RTE-BovB	(150)	3662	3631	2552377
624	18.0	0.8	4.1	chr3	37993318	37993439	(160302120)	+	AluJb	SINE/Alu	181	298	(14)	2552378
13	11.0	0.0	6.1	chr3	38455466	38455498	(159840061)	+	G-rich	Low_complexity	1	33	(0)	2553074
2122	13.9	3.6	0.7	chr3	45712241	45712535	(152583024)	C	AluSz6	SINE/Alu	(8)	304	1	2564331
1354	26.4	11.5	6.2	chr3	45712536	45712581	(152582978)	C	Tigger13a	DNA/TcMar-Tigger	(724)	47	2	2564329
360	31.5	17.5	2.3	chr3	45712597	45713074	(152582485)	C	L2b	LINE/L2	(460)	2959	2394	2564325
12	22.4	0.0	2.6	chr3	47803441	47803478	(150492081)	+	G-rich	Low_complexity	1	38	(0)	2568028
669	20.7	15.0	7.0	chr3	47961553	47961796	(150333763)	+	LTR41C	LTR/ERVL	1	267	(434)	2568339
2093	18.2	13.8	0.6	chr3	47961895	47962365	(150333194)	+	MER66C	LTR/ERV1	1	543	(12)	2568340
13	9.0	4.9	7.0	chr3	49007806	49007846	(149287713)	+	(GGAGCGC)n	Simple_repeat	1	43	(0)	2570462
2048	7.9	6.1	0.0	chr3	49071069	49071345	(149224214)	C	AluY	SINE/Alu	(16)	295	1	2570600
291	21.1	0.0	14.7	chr3	49071375	49071483	(149224076)	+	AluSq10	SINE/Alu	1	93	(220)	2570601
791	14.4	6.1	4.8	chr3	49071485	49071630	(149223929)	+	AluSz	SINE/Alu	1	148	(164)	2570602
977	19.7	1.5	2.9	chr3	54304027	54304235	(143991324)	C	MER20	DNA/hAT-Charlie	(5)	214	9	2578894
1380	28.8	5.5	3.8	chr3	55564523	55564844	(142730715)	+	MLT1J	LTR/ERVL-MaLR	1	325	(187)	2580657
1104	20.9	5.4	0.0	chr3	55564845	55565055	(142730504)	C	MER58A	DNA/hAT-Charlie	(0)	224	2	2580658
1380	28.8	5.5	3.8	chr3	55565056	55565231	(142730328)	+	MLT1J	LTR/ERVL-MaLR	326	508	(4)	2580657
13	14.5	3.2	0.0	chr3	58008464	58008494	(140287065)	+	(CCCGCT)n	Simple_repeat	1	32	(0)	2585183
1951	12.1	0.7	0.0	chr3	58025677	58025941	(140269618)	+	AluSz	SINE/Alu	34	300	(12)	2585222
374	27.4	3.1	0.0	chr3	58025946	58026040	(140269519)	+	MIRb	SINE/MIR	163	260	(8)	2585223
250	17.4	0.0	0.0	chr3	58334915	58334928	(139960631)	C	AluSq	SINE/Alu	(182)	131	118	2585828
63	1.8	0.0	0.0	chr3	58334929	58334986	(139960573)	+	(GT)n	Simple_repeat	1	58	(0)	2585829
250	17.4	0.0	0.0	chr3	58334987	58335018	(139960541)	C	AluSq	SINE/Alu	(196)	117	86	2585828
48	0.0	0.0	0.0	chr3	58335019	58335059	(139960500)	+	(GT)n	Simple_repeat	1	41	(0)	2585830
696	18.3	0.9	0.0	chr3	58335060	58335174	(139960385)	C	AluJo	SINE/Alu	(196)	116	1	2585831
202	26.8	13.7	0.0	chr3	58629521	58629602	(139665957)	+	MIR3	SINE/MIR	53	147	(61)	2586395
2101	22.0	10.7	13.2	chr3	61531013	61531888	(136763671)	+	LTR102_Mam	LTR/ERVL	1	851	(0)	2590763
2361	24.6	7.7	6.9	chr3	61531899	61532709	(136762850)	+	LTR82B	LTR/ERVL	8	825	(5)	2590764
16	5.3	0.0	0.0	chr3	61560968	61560987	(136734572)	+	(A)n	Simple_repeat	1	20	(0)	2590826
454	26.6	10.6	2.9	chr3	61575422	61575595	(136719964)	+	MIRb	SINE/MIR	49	237	(31)	2590845
2006	11.4	1.0	5.7	chr3	61575599	61575915	(136719644)	C	AluSx	SINE/Alu	(9)	303	2	2590846
408	28.6	0.8	0.0	chr3	61821797	61821915	(136473644)	C	MIR	SINE/MIR	(48)	214	95	2591292
186	30.6	2.7	2.7	chr3	61822016	61822089	(136473470)	C	MIR	SINE/MIR	(129)	133	60	2591293
629	22.8	13.0	2.2	chr3	61894916	61895099	(136400460)	C	MER20	DNA/hAT-Charlie	(11)	208	2	2591419
592	28.5	3.5	4.3	chr3	62143757	62143987	(136151572)	+	MIR	SINE/MIR	21	249	(13)	2591827
1126	22.5	1.4	0.5	chr3	62143988	62144206	(136151353)	+	MER58A	DNA/hAT-Charlie	1	221	(3)	2591828
23	26.1	3.6	4.3	chr3	65549262	65549372	(132746187)	+	(CTCC)n	Simple_repeat	1	115	(0)	2597590
21	11.2	0.0	0.0	chr3	69083184	69083213	(129212346)	+	(A)n	Simple_repeat	1	30	(0)	2603419
14	0.0	0.0	0.0	chr3	69084996	69085013	(129210546)	+	(GCC)n	Simple_repeat	1	18	(0)	2603423
2440	10.9	0.3	0.0	chr3	71140987	71141290	(127154269)	+	AluSc8	SINE/Alu	1	305	(6)	2606762
355	33.3	3.2	1.3	chr3	71141593	71141744	(127153815)	C	L2b	LINE/L2	(8)	3367	3213	2606763
17	11.2	0.0	0.0	chr3	72887887	72887916	(125407643)	+	(AACG)n	Simple_repeat	1	30	(0)	2610135
17	6.3	5.7	2.7	chr3	72888033	72888067	(125407492)	+	(CCT)n	Simple_repeat	1	37	(0)	2610136
284	24.2	15.1	8.2	chr3	72899031	72899055	(125396504)	+	MER91A	DNA/hAT-Tip100	139	163	(33)	2610154
301	30.0	0.0	0.0	chr3	72899071	72899150	(125396409)	+	MIR	SINE/MIR	3	82	(180)	2610156
1139	22.7	8.1	3.6	chr3	77370594	77370899	(120924660)	+	MER58B	DNA/hAT-Charlie	2	322	(19)	2616791
1704	16.6	5.3	0.4	chr3	89307582	89307852	(108987707)	C	AluJb	SINE/Alu	(27)	285	1	2631878
16	8.7	0.0	0.0	chr3	105368735	105368759	(92926800)	+	(GCT)n	Simple_repeat	1	25	(0)	2648183
349	24.4	15.6	4.8	chr3	107429709	107429936	(90865623)	C	Charlie23a	DNA/hAT-Charlie	(75)	264	8	2650829
14	13.9	2.2	6.5	chr3	107524117	107524161	(90771398)	+	(AGGTGG)n	Simple_repeat	1	46	(0)	2651002
374	35.3	9.9	1.2	chr3	111874255	111874440	(86421119)	+	L2b	LINE/L2	3181	3359	(16)	2657080
721	32.4	3.8	0.4	chr3	111874505	111874783	(86420776)	C	MLT1I	LTR/ERVL-MaLR	(120)	291	3	2657081
16	13.7	0.0	0.0	chr3	113247501	113247525	(85048034)	+	(A)n	Simple_repeat	1	25	(0)	2658953
662	23.0	9.2	1.1	chr3	113247542	113247730	(85047829)	+	MIRb	SINE/MIR	25	230	(38)	2658954
66	18.3	2.9	0.7	chr3	114454074	114454211	(83841348)	+	GA-rich	Low_complexity	1	142	(0)	2660762
292	35.1	3.9	2.8	chr3	123431730	123431905	(74863654)	C	Mam_R4	LINE/Dong-R4	(653)	3156	2979	2673687
246	21.3	4.7	0.0	chr3	123431916	123431976	(74863583)	C	MER5B	DNA/hAT-Charlie	(0)	178	115	2673688
15	14.7	0.0	0.0	chr3	128994259	128994288	(69301271)	+	(TTCA)n	Simple_repeat	1	30	(0)	2682836
810	28.0	15.3	1.0	chr3	129983805	129984222	(68311337)	C	LTR16C	LTR/ERVL	(0)	489	1	2684819
291	27.1	0.0	0.0	chr3	129984304	129984373	(68311186)	+	L2a	LINE/L2	3350	3419	(7)	2684812
191	28.1	12.0	6.4	chr3	133377469	133377578	(64917981)	+	MIR	SINE/MIR	11	127	(135)	2689800
1981	12.5	0.3	13.6	chr3	133377701	133378090	(64917469)	+	MER1B	DNA/hAT-Charlie	1	338	(1)	2689801
17	31.2	0.0	0.0	chr3	134795323	134795373	(63500186)	+	(CT)n	Simple_repeat	1	51	(0)	2691963
33	29.1	1.0	0.0	chr3	134795373	134795487	(63500072)	+	(CA)n	Simple_repeat	1	116	(0)	2691964
17	31.1	0.0	0.0	chr3	134795374	134795381	(63500178)	+	(CGCTCT)n	Simple_repeat	5	63	(0)	2691965
2385	10.5	0.0	1.3	chr3	136380738	136381052	(61914507)	+	AluSx1	SINE/Alu	1	311	(1)	2694269
12	17.1	2.9	2.8	chr3	138608976	138609010	(59686549)	+	(CGCC)n	Simple_repeat	1	36	(0)	2697787
957	22.6	8.0	2.1	chr3	142658048	142658190	(55637369)	C	L1ME3Cz	LINE/L1	(0)	997	854	2704501
2176	13.6	0.0	1.0	chr3	142658191	142658492	(55637067)	+	AluSx1	SINE/Alu	1	299	(13)	2704502
1873	9.3	9.7	0.4	chr3	143008761	143009039	(55286520)	C	AluY	SINE/Alu	(3)	308	1	2705068
400	31.9	6.7	8.5	chr3	143009040	143009127	(55286432)	C	L1M5	LINE/L1	(1827)	4319	4236	2705067
14	28.2	0.0	4.6	chr3	155870798	155870862	(42424697)	+	(CCGTC)n	Simple_repeat	1	65	(0)	2723195
12	17.5	3.1	0.0	chr3	155870839	155870870	(42424689)	+	(CCGGCC)n	Simple_repeat	1	33	(0)	2723196
1410	20.4	12.4	4.6	chr3	160691697	160692149	(37603410)	+	MLT1D	LTR/ERVL-MaLR	1	493	(12)	2730208
11264	13.2	1.8	0.8	chr3	160692217	160694049	(37601510)	+	Tigger1	DNA/TcMar-Tigger	1	1852	(566)	2730209
442	32.7	7.3	2.9	chr3	161225989	161226158	(37069401)	+	MIR3	SINE/MIR	10	187	(21)	2731026
2270	9.8	2.3	0.0	chr3	161226172	161226468	(37069091)	+	AluSx	SINE/Alu	1	304	(8)	2731027
37	0.0	0.0	0.0	chr3	168096250	168096281	(30199278)	+	(GT)n	Simple_repeat	1	32	(0)	2739595
74	9.6	2.4	0.0	chr3	169663443	169663565	(28631994)	+	(CT)n	Simple_repeat	1	126	(0)	2741635
16	14.2	0.0	0.0	chr3	171810484	171810514	(26485045)	+	(GGGA)n	Simple_repeat	1	31	(0)	2745122
267	35.8	7.0	1.2	chr3	173547675	173547835	(24747724)	+	LFSINE_Vert	SINE/tRNA	7	177	(282)	2747702
28077	1.6	0.1	0.0	chr3	192149316	192155328	(6140231)	C	L1PA2	LINE/L1	(2)	6153	136	2777471
15	7.2	3.2	3.1	chr3	194003708	194003738	(4291821)	+	(CCTGGG)n	Simple_repeat	1	32	(0)	2780352
180	10.7	0.0	0.0	chr3	194091286	194091313	(4204246)	+	X6A_LINE	LINE/CR1	1030	1057	(23)	2780516
218	22.9	4.7	1.6	chr3	194091479	194091540	(4204019)	C	MIR3	SINE/MIR	(47)	161	98	2780517
16	24.9	1.9	0.0	chr3	194134978	194135029	(4160530)	+	(CCGGCCC)n	Simple_repeat	1	53	(0)	2780603
24	12.1	0.0	0.0	chr3	194135038	194135073	(4160486)	+	(CA)n	Simple_repeat	1	36	(0)	2780604
13	18.9	2.8	0.0	chr3	195259677	195259712	(3035847)	+	G-rich	Low_complexity	1	37	(0)	2782609
555	27.3	4.9	10.2	chr3	197738053	197738214	(557345)	C	MER102b	DNA/hAT-Charlie	(177)	164	7	2787428
634	25.3	21.2	0.6	chr4	782342	782655	(189431900)	+	L2a	LINE/L2	3017	3412	(14)	2789517
17	25.2	5.7	0.0	chr4	2238430	2238498	(187976057)	+	A-rich	Low_complexity	1	72	(0)	2791308
445	33.6	7.5	5.2	chr4	4764105	4764900	(185449655)	C	L1M5	LINE/L1	(394)	5800	4990	2795412
251	16.2	1.1	0.4	chr4	7662921	7663377	(182551178)	+	(GTGA)n	Simple_repeat	1	462	(0)	2800506
622	17.4	5.7	1.5	chr4	13640025	13640146	(176574409)	+	MER63B	DNA/hAT-Blackjack	297	425	(11)	2809620
3234	15.3	2.9	0.2	chr4	13640147	13640651	(176573904)	C	LTR72	LTR/ERV1	(0)	519	1	2809621
2200	9.7	0.4	0.4	chr4	19652992	19653300	(170561255)	C	AluSx4	SINE/Alu	(0)	310	2	2819834
2124	12.6	1.0	0.0	chr4	19653364	19653665	(170560890)	+	AluSp	SINE/Alu	1	305	(8)	2819835
445	29.6	1.2	1.2	chr4	19823864	19824024	(170390531)	+	Eulor6B	DNA?	84	244	(94)	2820091
44	21.5	6.1	0.0	chr4	30720221	30720242	(159494313)	+	GA-rich	Low_complexity	1	135	(0)	2837091
30	20.2	5.7	2.7	chr4	30720243	30720347	(159494208)	+	G-rich	Low_complexity	1	111	(0)	2837092
14	13.4	2.1	8.2	chr4	40857167	40857214	(149357341)	+	(CGCC)n	Simple_repeat	1	49	(0)	2852979
404	27.4	7.3	3.9	chr4	41178410	41178600	(149035955)	+	L2a	LINE/L2	3202	3425	(1)	2853594
433	32.7	14.1	0.0	chr4	41178647	41178848	(149035707)	C	MIRc	SINE/MIR	(31)	237	3	2853595
634	30.2	9.0	3.2	chr4	48243265	48243483	(141971072)	+	MIRb	SINE/MIR	20	252	(16)	2863540
305	32.2	11.3	5.8	chr4	48243533	48243741	(141970814)	C	L2c	LINE/L2	(0)	3387	3178	2863541
58	6.2	3.5	5.1	chr4	55397620	55397732	(134816823)	+	(CCTTT)n	Simple_repeat	1	117	(0)	2870820
1586	13.7	5.1	3.3	chr4	55397741	55398011	(134816544)	C	AluJo	SINE/Alu	(6)	306	31	2870821
320	27.3	9.8	4.3	chr4	56187185	56187368	(134027187)	C	L2c	LINE/L2	(116)	3271	3077	2872197
3040	20.6	1.5	1.2	chr4	56743310	56743461	(133471094)	C	MER119	DNA/hAT-Charlie	(0)	583	436	2873173
2381	21.3	2.3	3.8	chr4	56743462	56743988	(133470567)	C	LTR40a	LTR/ERVL	(0)	519	1	2873174
251	26.2	0.0	1.5	chr4	57111230	57111295	(133103260)	+	MamRep488	DNA/hAT-Tip100	75	139	(80)	2873984
962	16.3	1.9	1.4	chr4	66577737	66577948	(123636607)	+	L1MA4	LINE/L1	6085	6297	(3)	2885778
54	0.0	0.0	0.0	chr4	74099785	74099830	(116114725)	+	(GT)n	Simple_repeat	1	46	(0)	2895706
10677	11.1	3.5	1.8	chr4	81473383	81475487	(108739068)	+	L1PA7	LINE/L1	5	2168	(4331)	2906161
9960	9.3	0.9	0.1	chr4	85129233	85130579	(105083976)	C	L1P3	LINE/L1	(5102)	1359	2	2912146
66	0.0	0.0	0.0	chr4	85827462	85827517	(104387038)	+	(GT)n	Simple_repeat	1	56	(0)	2913040
340	28.4	7.4	7.4	chr4	87018233	87018434	(103196121)	C	L2c	LINE/L2	(61)	3326	3125	2914802
22263	9.9	4.9	1.8	chr4	88880093	88886306	(101328249)	+	L1PB1	LINE/L1	35	6498	(369)	2917806
24	19.2	0.0	1.8	chr4	89837163	89837217	(100377338)	+	(TCC)n	Simple_repeat	1	55	(0)	2919194
1493	24.8	6.0	6.2	chr4	91064258	91064808	(99149747)	C	MER68B	LTR/ERVL	(2)	562	13	2920753
316	26.9	25.4	2.2	chr4	94743746	94743984	(95470571)	C	MER124	DNA?	(46)	351	57	2925493
1481	10.7	0.5	0.0	chr4	104404494	104404709	(85809846)	+	L1PA12	LINE/L1	2374	2590	(4391)	2938164
1885	19.6	1.7	2.2	chr4	107468745	107469157	(82745398)	+	MER57D	LTR/ERV1	1	411	(0)	2942115
414	29.4	5.3	5.9	chr4	108148530	108148699	(82065856)	+	L2b	LINE/L2	3205	3373	(2)	2943011
1260	30.5	6.5	3.5	chr4	108224304	108224962	(81989593)	C	L4_A_Mam	LINE/RTE-X	(3101)	1889	1210	2943131
434	28.4	0.7	0.7	chr4	108237652	108237800	(81976755)	+	MER124	DNA?	215	363	(34)	2943152
853	23.1	0.0	0.0	chr4	118347679	118347851	(71866704)	C	AluJo	SINE/Alu	(2)	310	138	2956755
306	34.0	5.8	0.0	chr4	119124682	119124778	(71089777)	+	L2c	LINE/L2	3261	3363	(24)	2958007
3039	16.7	4.5	0.5	chr4	119730565	119731135	(70483420)	C	LTR49	LTR/ERV1	(0)	595	1	2958903
275	29.3	11.3	8.7	chr4	122223267	122223438	(67991117)	C	MER103C	DNA/hAT-Charlie	(4)	293	117	2962238
14	11.6	0.0	3.3	chr4	137510988	137511017	(52703538)	+	(TTTTG)n	Simple_repeat	1	30	(0)	2981756
2343	9.3	2.0	0.3	chr4	139243095	139243383	(50971172)	+	AluSg	SINE/Alu	1	294	(16)	2984259
16	5.2	0.0	0.0	chr4	139555180	139555199	(50659356)	+	(A)n	Simple_repeat	1	20	(0)	2984843
16	0.0	0.0	0.0	chr4	140154108	140154127	(50060428)	+	(CGC)n	Simple_repeat	1	20	(0)	2985804
34	2.4	2.3	2.2	chr4	140154128	140154171	(50060384)	+	(CCT)n	Simple_repeat	1	45	(0)	2985805
18	15.0	2.1	4.1	chr4	140154307	140154354	(50060201)	+	(CGCCCGG)n	Simple_repeat	1	49	(0)	2985806
324	26.0	2.3	15.1	chr4	140726984	140727182	(49487373)	C	Charlie29a	DNA/hAT-Charlie	(544)	175	3	2986658
1526	18.5	4.3	1.2	chr4	146407211	146407544	(43807011)	C	L1MA10	LINE/L1	(4)	6330	5986	2994289
217	35.1	9.4	3.1	chr4	146407545	146407640	(43806915)	+	Tigger19b	DNA/TcMar-Tigger	370	469	(81)	2994288
265	27.3	3.8	0.0	chr4	146407660	146407736	(43806819)	+	MLT1L	LTR/ERVL-MaLR	1	80	(530)	2994290
411	27.6	17.7	3.5	chr4	146407813	146407981	(43806574)	+	Charlie17a	DNA/hAT-Charlie	18	215	(2)	2994291
12	19.5	0.0	8.3	chr4	151015367	151015414	(39199141)	+	G-rich	Low_complexity	1	48	(0)	3000636
275	37.0	0.7	1.5	chr4	151250808	151250944	(38963611)	+	L3	LINE/CR1	2976	3111	(988)	3001137
248	27.3	8.3	0.0	chr4	151250965	151251052	(38963503)	+	L2a	LINE/L2	99	194	(3225)	3001138
5202	24.4	14.8	2.1	chr4	151251058	151251186	(38963369)	+	L2a	LINE/L2	858	994	(2425)	3001138
2246	11.8	0.0	0.0	chr4	153451059	153451355	(36763200)	C	AluSx1	SINE/Alu	(14)	298	2	3004690
384	27.4	5.7	6.6	chr4	153451356	153451408	(36763147)	C	L1ME4c	LINE/L1	(470)	360	313	3004689
13	8.7	4.0	0.0	chr4	156959255	156959279	(33255276)	+	(AAAC)n	Simple_repeat	1	26	(0)	3009477
66	3.1	0.0	0.0	chr4	159104490	159104554	(31110001)	+	(GA)n	Simple_repeat	1	65	(0)	3012419
24	9.5	0.0	0.0	chr4	159104555	159104588	(31109967)	+	(TG)n	Simple_repeat	1	34	(0)	3012420
390	26.8	22.6	1.7	chr4	165206730	165207078	(25007477)	+	L2a	LINE/L2	2981	3423	(3)	3020736
16	16.3	4.9	0.0	chr4	165207420	165207460	(25007095)	+	(GCCC)n	Simple_repeat	1	43	(0)	3020741
289	27.1	4.8	4.8	chr4	170017356	170017502	(20197053)	C	MIRc	SINE/MIR	(1)	267	121	3027251
1460	26.9	7.6	1.8	chr4	177596012	177596567	(12617988)	C	MLT1G	LTR/ERVL-MaLR	(0)	591	1	3037163
737	35.3	5.4	8.5	chr4	181647276	181648061	(8566494)	+	X6A_LINE	LINE/CR1	320	1079	(1)	3042370
582	22.1	0.0	1.6	chr4	182922912	182923035	(7291520)	C	MIR3	SINE/MIR	(6)	202	81	3044087
43	0.0	0.0	0.0	chr4	182923295	182923331	(7291224)	+	(TG)n	Simple_repeat	1	37	(0)	3044088
236	27.4	3.2	1.0	chr4	184815452	184815544	(5399011)	C	L2c	LINE/L2	(20)	3355	3258	3047203
75	31.9	0.9	7.0	chr4	185740589	185741043	(4473512)	+	(CAACT)n	Simple_repeat	1	459	(0)	3048690
683	31.3	0.0	0.0	chr5	408004	408198	(181130061)	C	MER58A	DNA/hAT-Charlie	(2)	222	28	3055399
1006	34.9	3.4	1.8	chr5	408234	408969	(181129290)	C	L1M5	LINE/L1	(2043)	4103	3356	3055397
9787	17.3	6.2	3.6	chr5	450272	453302	(181084957)	C	L1M4c	LINE/L1	(3229)	3153	25	3055435
155	24.3	0.8	1.0	chr5	1034987	1035366	(180502893)	+	(AGTG)n	Simple_repeat	1	383	(0)	3055908
34	0.0	0.0	0.0	chr5	10249898	10249934	(171288325)	+	(A)n	Simple_repeat	1	37	(0)	3066554
549	26.1	9.2	4.1	chr5	10289194	10289389	(171248870)	+	MIRc	SINE/MIR	23	229	(39)	3066621
343	33.3	1.4	2.8	chr5	10289489	10289633	(171248626)	+	MIR	SINE/MIR	85	227	(35)	3066622
40	25.7	2.9	7.5	chr5	10307850	10308095	(171230164)	+	G-rich	Low_complexity	1	253	(0)	3066658
237	21.7	6.8	0.0	chr5	10607031	10607099	(170931160)	C	Charlie18a	DNA/hAT-Charlie	(139)	203	130	3067226
1010	27.8	4.1	3.0	chr5	10607174	10607536	(170930723)	C	MLT1I	LTR/ERVL-MaLR	(5)	406	40	3067227
19	7.3	0.0	0.0	chr5	14011855	14011883	(167526376)	+	(GCGCG)n	Simple_repeat	1	29	(0)	3071610
669	18.4	7.8	10.4	chr5	14131791	14131965	(167406294)	+	L5	LINE/RTE-X	2088	2259	(6)	3071838
769	29.1	3.0	0.0	chr5	14132220	14132446	(167405813)	+	LTR33	LTR/ERVL	1	234	(281)	3071840
286	27.9	13.8	2.0	chr5	14147165	14147326	(167390933)	C	MIRb	SINE/MIR	(31)	177	10	3071862
5901	21.1	6.9	4.4	chr5	14155184	14156718	(167381541)	C	L1MC4	LINE/L1	(76)	7966	6390	3071872
2147	11.3	4.1	0.3	chr5	14173230	14173511	(167364748)	C	AluSx	SINE/Alu	(19)	293	1	3071893
15	13.9	0.0	0.0	chr5	14173590	14173613	(167364646)	+	(T)n	Simple_repeat	1	24	(0)	3071894
356	24.4	5.8	6.4	chr5	16618266	16618405	(164919854)	+	L1ME3	LINE/L1	6016	6154	(8)	3075254
2048	14.8	0.3	0.7	chr5	16879896	16880205	(164658054)	+	AluSz	SINE/Alu	1	309	(3)	3075699
2298	10.5	0.0	0.0	chr5	16966166	16966460	(164571799)	C	AluSg	SINE/Alu	(14)	296	2	3075896
2222	9.9	0.3	0.0	chr5	17145464	17145784	(164392475)	C	AluSq2	SINE/Alu	(0)	313	4	3076321
1463	20.4	10.3	1.9	chr5	17189306	17189729	(164348530)	C	MLT1C	LTR/ERVL-MaLR	(3)	464	1	3076417
1593	13.7	0.9	0.5	chr5	32131959	32132177	(149406082)	+	AluJb	SINE/Alu	87	306	(6)	3096219
2236	12.0	0.3	0.3	chr5	32157695	32157978	(149380281)	+	AluSq2	SINE/Alu	1	284	(29)	3096279
47	0.0	0.0	0.0	chr5	32157979	32158021	(149380238)	+	(AAAT)n	Simple_repeat	1	43	(0)	3096280
44	0.0	0.0	0.0	chr5	32158024	32158061	(149380198)	+	(AC)n	Simple_repeat	1	38	(0)	3096281
43	0.0	0.0	0.0	chr5	32158092	32158130	(149380129)	+	(AAAT)n	Simple_repeat	1	39	(0)	3096282
49	0.0	0.0	0.0	chr5	32158133	32158174	(149380085)	+	(AC)n	Simple_repeat	1	42	(0)	3096283
374	23.6	15.2	0.0	chr5	32278419	32278541	(149259718)	+	Tigger10	DNA/TcMar-Tigger	486	630	(1214)	3096532
257	26.4	7.6	4.0	chr5	32278594	32278719	(149259540)	+	MER5A	DNA/hAT-Charlie	38	168	(21)	3096533
2247	10.8	0.0	0.3	chr5	32367152	32367437	(149170822)	+	AluSq2	SINE/Alu	1	285	(28)	3096702
51	0.0	1.9	1.8	chr5	32367438	32367491	(149170768)	+	(AAAT)n	Simple_repeat	1	55	(0)	3096703
1460	17.4	2.9	5.2	chr5	32367492	32367693	(149170566)	C	AluJo	SINE/Alu	(83)	229	21	3096701
323	29.5	10.9	4.9	chr5	33441308	33441471	(148096788)	C	MIR3	SINE/MIR	(0)	208	34	3098353
15	17.5	3.1	0.0	chr5	34484187	34484218	(147054041)	+	(AT)n	Simple_repeat	1	33	(0)	3099847
2094	13.6	22.3	5.3	chr5	34484670	34485103	(147053156)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	3099848
610	28.4	7.0	5.1	chr5	34998234	34998526	(146539733)	C	MLT1L	LTR/ERVL-MaLR	(214)	396	98	3100763
574	22.0	9.6	0.7	chr5	36745676	36745826	(144792433)	+	MER5A1	DNA/hAT-Charlie	1	166	(0)	3103278
463	25.6	19.9	2.1	chr5	36875101	36875387	(144662872)	C	L2a	LINE/L2	(3)	3423	3073	3103484
241	26.1	4.3	1.1	chr5	36875441	36875529	(144662730)	C	L2a	LINE/L2	(509)	2910	2819	3103484
19	4.0	0.0	0.0	chr5	36877200	36877225	(144661034)	+	(CGG)n	Simple_repeat	1	26	(0)	3103488
8105	23.9	10.3	1.6	chr5	36931617	36932778	(144605481)	C	L1ME1	LINE/L1	(2809)	3510	2247	3103562
184	39.9	4.1	2.9	chr5	36952964	36953203	(144585056)	C	L2c	LINE/L2	(235)	3152	2910	3103607
664	29.1	12.7	0.0	chr5	36953279	36953505	(144584754)	+	MIR	SINE/MIR	2	261	(1)	3103608
12	20.8	4.3	2.1	chr5	37249371	37249416	(144288843)	+	(GGCGCG)n	Simple_repeat	1	48	(0)	3104089
27	19.1	4.7	5.4	chr5	37371280	37371385	(144166874)	+	G-rich	Low_complexity	1	111	(0)	3104376
233	27.7	8.5	4.8	chr5	37848346	37848470	(143689789)	+	MARNA	DNA/TcMar-Mariner	409	538	(48)	3105118
216	33.5	13.0	0.6	chr5	37848473	37848634	(143689625)	+	L2c	LINE/L2	3202	3386	(1)	3105119
525	15.7	2.4	0.0	chr5	37850721	37850803	(143687456)	C	MER58B	DNA/hAT-Charlie	(0)	341	257	3105122
15	22.6	4.8	0.0	chr5	38556751	38556792	(142981467)	+	(CG)n	Simple_repeat	1	44	(0)	3106292
204	35.4	3.1	6.8	chr5	38783371	38783542	(142754717)	+	MIR3	SINE/MIR	2	159	(49)	3106667
483	27.2	12.0	1.6	chr5	38789764	38789957	(142748302)	C	MLT1L	LTR/ERVL-MaLR	(213)	397	181	3106675
244	20.4	5.3	0.0	chr5	38789987	38790040	(142748219)	C	MLT1L	LTR/ERVL-MaLR	(534)	76	20	3106675
488	22.6	0.8	9.5	chr5	38790048	38790184	(142748075)	+	L2c	LINE/L2	3262	3386	(1)	3106676
12	16.3	5.4	9.0	chr5	41904484	41904557	(139633702)	+	G-rich	Low_complexity	1	78	(0)	3110987
1628	21.9	4.6	5.8	chr5	50866654	50867183	(130671076)	+	Charlie1b	DNA/hAT-Charlie	1	523	(0)	3117033
31	3.3	0.0	0.0	chr5	52989806	52989836	(128548423)	+	(AC)n	Simple_repeat	1	31	(0)	3119684
533	31.8	4.8	2.9	chr5	54302288	54302491	(127235768)	+	MIRb	SINE/MIR	31	238	(30)	3121515
509	25.0	13.6	0.0	chr5	54302615	54302683	(127235576)	C	MER45A	DNA/hAT-Tip100	(2)	176	102	3121516
581	26.3	9.2	4.3	chr5	57494370	57494719	(124043540)	+	HAL1	LINE/L1	1	369	(2138)	3126846
2939	16.4	4.4	2.6	chr5	59300587	59301126	(122237133)	C	MER21A	LTR/ERVL	(6)	925	376	3129338
309	30.5	3.0	2.3	chr5	59301077	59301207	(122237052)	C	MER39B	LTR/ERV1	(252)	401	270	3129339
1193	12.2	16.3	0.0	chr5	59301132	59301352	(122236907)	C	MER21A	LTR/ERVL	(667)	264	1	3129340
23750	8.3	0.9	0.7	chr5	59302384	59306532	(122231727)	C	L1PB1	LINE/L1	(4)	6863	2681	3129342
342	27.7	7.0	0.6	chr5	59317408	59317567	(122220692)	C	MamGypsy2-LTR	LTR/Gypsy	(7)	176	6	3129346
341	33.9	10.6	4.2	chr5	59361564	59361800	(122176459)	+	L2c	LINE/L2	3133	3386	(1)	3129407
13	19.8	0.0	6.5	chr5	59361911	59361956	(122176303)	+	(TTAT)n	Simple_repeat	1	46	(0)	3129408
466	32.3	9.7	1.3	chr5	60688357	60688582	(120849677)	+	MIRb	SINE/MIR	21	267	(1)	3131181
197	26.2	9.3	7.8	chr5	60688629	60688744	(120849515)	+	MIR3	SINE/MIR	1	118	(90)	3131182
299	35.4	0.7	0.0	chr5	66981699	66981842	(114556417)	C	L4_C_Mam	LINE/RTE-X	(1458)	3680	3536	3140215
375	29.3	4.5	3.8	chr5	66982010	66982156	(114556103)	C	MIRb	SINE/MIR	(84)	184	49	3140217
13	23.2	3.9	1.9	chr5	69094190	69094241	(112444018)	+	(GCGGCA)n	Simple_repeat	1	54	(0)	3143234
15	12.6	0.0	7.5	chr5	69094270	69094309	(112443950)	+	(CGG)n	Simple_repeat	1	40	(0)	3143235
382	28.3	5.5	1.7	chr5	69189834	69190009	(112348250)	+	MIRb	SINE/MIR	45	227	(41)	3143460
2143	10.7	3.8	0.0	chr5	69520856	69521136	(112017123)	C	AluSx	SINE/Alu	(20)	292	1	3144234
901	23.9	9.2	3.4	chr5	69521162	69521486	(112016773)	C	L1ME3G	LINE/L1	(246)	678	333	3144235
16	21.0	4.1	5.3	chr5	72107366	72107438	(109430821)	+	(CGCGGAG)n	Simple_repeat	1	76	(0)	3148507
13	24.0	2.2	2.1	chr5	72848148	72848193	(108690066)	+	(CGG)n	Simple_repeat	1	47	(0)	3149599
586	32.5	12.0	4.5	chr5	74019634	74020663	(107517596)	C	L2c	LINE/L2	(632)	2787	1670	3151381
240	31.5	0.0	0.0	chr5	74020697	74020769	(107517490)	C	UCON55	DNA/TcMar-Tigger	(76)	116	44	3151383
292	32.6	2.4	1.7	chr5	75049766	75049905	(106488354)	+	MIRc	SINE/MIR	14	153	(55)	3152992
251	27.4	5.9	7.4	chr5	75049939	75050173	(106488086)	C	MIR	SINE/MIR	(48)	220	1	3152993
2277	5.4	1.8	0.4	chr5	77080669	77080947	(104457312)	+	L1PA6	LINE/L1	5872	6154	(0)	3156148
676	29.4	6.5	1.3	chr5	77081020	77081326	(104456933)	+	L1M5	LINE/L1	5265	5588	(535)	3156149
433	28.5	8.1	6.5	chr5	77133116	77133440	(104404819)	+	MLT1H2	LTR/ERVL-MaLR	101	533	(16)	3156245
17	15.8	2.2	4.3	chr5	77492451	77492496	(104045763)	+	(GCG)n	Simple_repeat	1	47	(0)	3156732
20	15.9	5.1	6.0	chr5	79514225	79514303	(102023956)	+	(GCCGCGG)n	Simple_repeat	1	83	(0)	3159873
472	16.0	6.2	0.9	chr5	79537808	79537914	(102000345)	+	MIRc	SINE/MIR	153	265	(3)	3159921
674	32.0	8.4	3.6	chr5	79853563	79854094	(101684165)	C	L3	LINE/CR1	(199)	3900	3341	3160465
11433	11.4	3.0	2.4	chr5	88171612	88173573	(93364686)	C	L1PA7	LINE/L1	(4481)	2018	2	3171965
341	28.7	8.0	3.4	chr5	92924144	92924262	(88613997)	C	MamRep38	DNA/hAT	(170)	125	1	3178030
43	0.0	0.0	0.0	chr5	93606252	93606288	(87931971)	+	(AC)n	Simple_repeat	1	37	(0)	3178856
230	22.9	1.4	5.4	chr5	95555504	95555577	(85982682)	C	Charlie9	DNA/hAT-Charlie	(7)	2750	2680	3181311
9941	9.0	0.0	0.1	chr5	95710731	95712075	(85826184)	C	HERVS71-int	LTR/ERV1	(5742)	3236	1893	3181554
1528	18.7	3.7	0.9	chr5	95729571	95729915	(85808344)	C	L1MB2	LINE/L1	(62)	6109	5755	3181580
507	23.3	8.1	4.1	chr5	96745944	96746168	(84792091)	C	MIRc	SINE/MIR	(24)	244	5	3183052
8733	23.0	8.4	2.7	chr5	103368162	103370152	(78168107)	C	L1M4b	LINE/L1	(4625)	2242	158	3191347
1683	18.2	0.7	0.3	chr5	107634244	107634528	(73903731)	+	AluJr4	SINE/Alu	11	296	(16)	3196594
16	0.0	0.0	0.0	chr5	109409818	109409834	(72128425)	+	(A)n	Simple_repeat	1	17	(0)	3198946
13	29.5	0.0	2.0	chr5	109409882	109409932	(72128327)	+	(CCT)n	Simple_repeat	1	51	(0)	3198947
1656	23.3	5.3	4.5	chr5	109688258	109688897	(71849362)	C	LTR41	LTR/ERVL	(47)	721	3	3199329
12	20.0	5.0	0.0	chr5	115262801	115262840	(66275419)	+	(CCGCTCA)n	Simple_repeat	1	42	(0)	3206534
199	24.3	7.5	6.3	chr5	115873381	115873459	(65664800)	C	L3	LINE/CR1	(1101)	2998	2919	3207414
18	4.8	0.0	0.0	chr5	116575153	116575174	(64963085)	+	(A)n	Simple_repeat	1	22	(0)	3208282
22	3.9	0.0	0.0	chr5	116882147	116882173	(64656086)	+	(AG)n	Simple_repeat	1	27	(0)	3208797
426	29.3	12.0	4.2	chr5	116882285	116882498	(64655761)	C	MIRb	SINE/MIR	(8)	260	28	3208798
6189	17.8	5.8	2.2	chr5	118967082	118968363	(62569896)	+	L1MC4a	LINE/L1	6401	7731	(151)	3211576
57	0.0	0.0	0.0	chr5	121961699	121961747	(59576512)	+	(AC)n	Simple_repeat	1	49	(0)	3215350
286	30.6	3.3	0.7	chr5	122333292	122333439	(59204820)	+	UCON29	DNA/PiggyBac?	1	152	(287)	3215768
1414	26.8	7.5	5.7	chr5	122811988	122812808	(58725451)	+	L2a	LINE/L2	2598	3426	(0)	3216480
26	17.8	3.1	1.5	chr5	123512385	123512449	(58025810)	+	(CTCG)n	Simple_repeat	1	67	(0)	3217484
579	30.4	4.4	1.6	chr5	124274384	124274627	(57263632)	+	MIR	SINE/MIR	2	252	(10)	3218448
15	18.5	0.0	6.1	chr5	124735404	124735452	(56802807)	+	(GCCCAGG)n	Simple_repeat	1	49	(0)	3219039
23	0.0	0.0	0.0	chr5	124741395	124741419	(56796840)	+	(A)n	Simple_repeat	1	25	(0)	3219041
19	8.1	0.0	0.0	chr5	124747158	124747183	(56791076)	+	(T)n	Simple_repeat	1	26	(0)	3219049
19	4.5	0.0	0.0	chr5	124754553	124754575	(56783684)	+	(A)n	Simple_repeat	1	23	(0)	3219058
915	30.8	4.9	4.0	chr5	126012868	126013290	(55524969)	+	L2	LINE/L2	1368	1794	(1625)	3220675
808	26.3	11.1	5.2	chr5	126013324	126013364	(55524895)	+	L2a	LINE/L2	1675	1715	(1704)	3220676
48	0.0	0.0	0.0	chr5	126013365	126013405	(55524854)	+	(CT)n	Simple_repeat	1	41	(0)	3220677
808	26.3	11.1	5.2	chr5	126013406	126013744	(55524515)	+	L2a	LINE/L2	1716	2080	(1339)	3220676
14	9.3	5.6	2.6	chr5	126601149	126601184	(54937075)	+	(GGAGCCA)n	Simple_repeat	1	38	(0)	3221499
1212	18.9	2.2	0.0	chr5	127549670	127549886	(53988373)	+	MER58A	DNA/hAT-Charlie	3	224	(0)	3222997
262	30.3	7.5	0.0	chr5	127549963	127550061	(53988198)	+	L1ME3G	LINE/L1	560	666	(258)	3222998
2549	5.7	0.0	1.0	chr5	128082079	128082379	(53455880)	+	AluY	SINE/Alu	1	298	(13)	3223721
18	32.4	1.9	3.7	chr5	128538382	128538488	(52999771)	+	G-rich	Low_complexity	1	109	(0)	3224262
12	19.9	2.3	4.4	chr5	131164982	131165025	(50373234)	+	(TCCCC)n	Simple_repeat	1	45	(0)	3227449
14	27.8	1.4	4.2	chr5	131264260	131264329	(50273930)	+	G-rich	Low_complexity	1	71	(0)	3227656
1739	17.4	2.4	1.4	chr5	131279788	131280075	(50258184)	+	AluJb	SINE/Alu	1	291	(21)	3227685
215	32.2	11.7	5.4	chr5	133467444	133467666	(48070593)	C	L2b	LINE/L2	(556)	2863	2625	3230997
11	17.2	7.7	0.0	chr5	134176870	134176908	(47361351)	+	(GGAGGCG)n	Simple_repeat	1	42	(0)	3232043
2546	6.9	1.0	0.7	chr5	134367369	134367673	(47170586)	C	AluSx	SINE/Alu	(6)	306	1	3232415
235	31.9	11.3	0.7	chr5	134737607	134737748	(46800511)	C	L2a	LINE/L2	(166)	3260	3102	3233227
2331	7.1	0.0	5.5	chr5	134737990	134738315	(46799944)	C	AluSg	SINE/Alu	(2)	308	1	3233228
27	24.4	1.3	1.3	chr5	134850919	134850994	(46687265)	+	(CATA)n	Simple_repeat	1	77	(0)	3233510
45	0.0	0.0	0.0	chr5	134850995	134851035	(46687224)	+	(TATT)n	Simple_repeat	1	41	(0)	3233511
20	20.7	0.0	0.0	chr5	134904310	134904348	(46633911)	+	A-rich	Low_complexity	1	39	(0)	3233620
12	20.5	0.0	2.8	chr5	135064149	135064184	(46474075)	+	(GCTGCA)n	Simple_repeat	1	36	(0)	3233832
14	14.9	0.0	3.1	chr5	138338358	138338389	(43199870)	+	(CCCT)n	Simple_repeat	1	32	(0)	3238687
350	28.0	3.1	0.0	chr5	139215542	139215634	(42322625)	C	L2a	LINE/L2	(0)	3426	3331	3240307
241	18.8	4.8	10.1	chr5	139215726	139215814	(42322445)	C	Charlie29a	DNA/hAT-Charlie	(542)	177	94	3240308
2117	12.8	1.6	0.0	chr5	139215820	139216117	(42322142)	+	AluJb	SINE/Alu	1	303	(9)	3240309
450	21.5	14.4	0.0	chr5	139261660	139261766	(42276493)	C	L2a	LINE/L2	(2)	3424	3300	3240433
45	2.4	0.0	0.0	chr5	139272593	139272635	(42265624)	+	(CA)n	Simple_repeat	1	43	(0)	3240464
15	0.0	5.3	0.0	chr5	139294474	139294492	(42243767)	+	(CG)n	Simple_repeat	1	20	(0)	3240506
2335	10.5	0.0	0.0	chr5	139376172	139376467	(42161792)	C	AluSg	SINE/Alu	(14)	296	1	3240662
294	32.9	3.8	6.2	chr5	139489922	139490083	(42048176)	+	L3	LINE/CR1	2988	3145	(954)	3240875
53	0.0	0.0	0.0	chr5	139490084	139490131	(42048128)	+	(ATTT)n	Simple_repeat	1	48	(0)	3240876
1981	12.3	0.3	0.0	chr5	139490132	139490415	(42047844)	C	AluSp	SINE/Alu	(28)	285	1	3240877
48	0.0	0.0	0.0	chr5	139698356	139698396	(41839863)	+	(TG)n	Simple_repeat	1	41	(0)	3241324
345	28.8	9.9	4.1	chr5	139881558	139881727	(41656532)	C	MIRb	SINE/MIR	(16)	252	72	3241667
534	29.2	7.4	2.6	chr5	140400501	140400732	(41137527)	C	MIRb	SINE/MIR	(21)	247	4	3242549
636	14.9	1.6	1.6	chr5	140726264	140726386	(40811873)	+	L1MC3	LINE/L1	6737	6859	(926)	3243152
190	26.7	0.0	0.0	chr5	142829904	142829948	(38708311)	C	MIRb	SINE/MIR	(173)	95	51	3246738
14	19.4	2.3	2.3	chr5	145835254	145835296	(35702963)	+	(CCGCGCG)n	Simple_repeat	1	44	(0)	3251378
183	24.6	1.7	5.0	chr5	145946351	145946410	(35591849)	+	Penelope1_Vert	LINE/Penelope	791	848	(239)	3251568
14	18.2	0.0	0.0	chr5	147510016	147510046	(34028213)	+	(AGCC)n	Simple_repeat	1	31	(0)	3254369
15	18.2	4.3	2.1	chr5	147510195	147510240	(34028019)	+	(GCGCAC)n	Simple_repeat	1	48	(0)	3254370
337	24.7	2.4	1.2	chr5	148011870	148011951	(33526308)	+	MLT1L	LTR/ERVL-MaLR	473	555	(55)	3255223
699	31.7	9.9	1.8	chr5	149936862	149937372	(31600887)	C	L2a	LINE/L2	(0)	3426	2871	3258874
1823	17.0	0.7	0.0	chr5	149937387	149937674	(31600585)	C	AluJb	SINE/Alu	(21)	291	2	3258875
888	25.4	4.4	2.8	chr5	150319808	150320144	(31218115)	C	MER113	DNA/hAT-Charlie	(112)	409	65	3259688
1047	26.3	14.1	2.2	chr5	150320145	150320505	(31217754)	+	MLT1I	LTR/ERVL-MaLR	1	411	(0)	3259689
300	36.4	10.0	2.5	chr5	150449218	150449420	(31088839)	C	MIRb	SINE/MIR	(43)	225	6	3259964
14	18.9	0.0	2.6	chr5	150449424	150449461	(31088798)	+	(CGTGGC)n	Simple_repeat	1	38	(0)	3259965
560	26.9	4.5	5.4	chr5	150637229	150637452	(30900807)	+	MIR	SINE/MIR	26	247	(15)	3260418
404	31.7	0.7	6.0	chr5	150672743	150672922	(30865337)	C	MIRb	SINE/MIR	(103)	165	1	3260491
854	32.5	1.1	12.1	chr5	154171178	154171573	(27366686)	C	L2b	LINE/L2	(1)	3374	3023	3266566
1942	13.1	3.2	0.0	chr5	157669206	157669480	(23868779)	C	AluSz	SINE/Alu	(24)	288	5	3273133
1955	12.9	0.0	1.1	chr5	157669487	157669818	(23868441)	C	AluSz	SINE/Alu	(0)	312	1	3273134
1478	26.0	10.9	4.2	chr5	158382509	158382966	(23155293)	C	MLT1H	LTR/ERVL-MaLR	(13)	536	44	3274505
2303	9.2	0.0	2.7	chr5	160008560	160008851	(21529408)	+	AluJb	SINE/Alu	1	284	(28)	3277188
59	0.0	0.0	0.0	chr5	160008852	160008904	(21529355)	+	(AAAT)n	Simple_repeat	1	53	(0)	3277189
224	37.8	0.0	0.0	chr5	169171201	169171274	(12366985)	C	MIRb	SINE/MIR	(23)	245	172	3291373
205	25.4	9.5	0.0	chr5	170393280	170393346	(11144913)	C	X7C_LINE	LINE/CR1	(85)	151	78	3293515
358	24.7	9.0	6.3	chr5	170821381	170821625	(10716634)	+	MIR	SINE/MIR	13	265	(3)	3294351
31	20.4	3.4	2.2	chr5	173328239	173328327	(8209932)	+	(CTC)n	Simple_repeat	1	92	(0)	3299412
355	27.3	1.0	0.0	chr5	175378574	175378672	(6159587)	C	X7A_LINE	LINE/CR1	(50)	217	118	3303328
510	23.2	1.1	0.2	chr5	176591513	176592659	(4945600)	+	(GGT)n	Simple_repeat	1	1160	(0)	3305621
1326	16.3	0.0	1.0	chr5	177110614	177110815	(4427444)	+	AluJr	SINE/Alu	1	200	(112)	3306683
385	17.9	9.1	6.0	chr5	177110845	177110961	(4427298)	+	AluJo	SINE/Alu	161	281	(31)	3306684
47	0.0	0.0	0.0	chr5	177110963	177111005	(4427254)	+	(AAAT)n	Simple_repeat	1	43	(0)	3306685
2276	10.1	1.0	0.7	chr5	177111011	177111318	(4426941)	+	AluSx1	SINE/Alu	1	309	(3)	3306686
225	29.5	3.2	0.0	chr5	177309613	177309673	(4228586)	+	L2b	LINE/L2	3307	3369	(6)	3307152
184	31.9	8.1	2.1	chr5	177309683	177309775	(4228484)	+	MIRc	SINE/MIR	40	138	(130)	3307153
318	33.1	15.8	0.4	chr5	177381333	177381572	(4156687)	+	L2	LINE/L2	1906	2189	(1230)	3307302
796	20.5	4.6	2.4	chr5	177401742	177401911	(4136348)	C	MER5B	DNA/hAT-Charlie	(4)	174	1	3307343
198	25.0	0.0	5.9	chr5	177401961	177402011	(4136248)	+	L2b	LINE/L2	3317	3364	(11)	3307344
255	39.1	0.0	1.8	chr5	177402766	177402877	(4135382)	C	MIR	SINE/MIR	(43)	219	110	3307345
2546	30.1	21.8	1.1	chr5	177556903	177557737	(3980522)	+	ERVL-E-int	LTR/ERVL	2941	3946	(1721)	3307614
12	10.6	2.9	5.7	chr5	178232817	178232850	(3305409)	+	(CGCCC)n	Simple_repeat	1	35	(0)	3308834
2176	7.3	2.7	3.6	chr5	180090667	180090969	(1447290)	C	AluSz	SINE/Alu	(12)	300	1	3312066
2460	9.7	0.0	0.0	chr5	181144210	181144517	(393742)	+	AluSg	SINE/Alu	1	308	(2)	3313725
600	22.0	6.5	2.5	chr5	181144531	181144723	(393536)	+	MER4-int	LTR/ERV1	1266	1442	(5156)	3313723
11291	11.7	4.8	1.2	chr5	181144737	181145977	(392282)	+	MER4-int	LTR/ERV1	4625	5911	(687)	3313723
702	0.0	0.0	0.0	chr5	181173650	181173724	(364535)	+	tRNA-Val-GTG	tRNA	1	75	(1)	3313784
728	1.2	0.0	0.0	chr5	181174044	181174125	(364134)	C	tRNA-Leu-CTY	tRNA	(3)	82	1	3313785
688	0.0	0.0	0.0	chr5	181218270	181218342	(319917)	C	tRNA-Val-GTY	tRNA	(3)	73	1	3313881
667	0.0	0.0	0.0	chr5	181221979	181222051	(316208)	C	tRNA-Lys-AAG	tRNA	(3)	73	1	3313889
14	24.1	0.0	8.6	chr6	684159	684228	(170121751)	+	GA-rich	Low_complexity	1	70	(0)	3315100
108	26.1	1.0	0.7	chr6	1146628	1146917	(169659062)	+	GA-rich	Low_complexity	1	293	(0)	3315700
15	0.0	0.0	0.0	chr6	1597173	1597189	(169208790)	+	(AC)n	Simple_repeat	1	17	(0)	3316374
271	30.9	2.1	0.0	chr6	1597384	1597477	(169208502)	+	UCON80_AMi	Unknown	70	165	(57)	3316375
183	28.7	8.3	6.2	chr6	1606324	1606453	(169199526)	+	L3b	LINE/CR1	4205	4337	(895)	3316384
18	17.8	0.0	0.0	chr6	1679931	1679968	(169126011)	+	A-rich	Low_complexity	1	38	(0)	3316457
471	28.7	8.6	0.6	chr6	1686213	1686394	(169119585)	C	UCON8	DNA	(821)	294	97	3316466
422	13.2	3.0	0.0	chr6	1737488	1738217	(169067762)	+	(CA)n	Simple_repeat	1	752	(0)	3316519
15	18.1	0.0	0.0	chr6	1865622	1865653	(168940326)	+	GA-rich	Low_complexity	1	32	(0)	3316667
672	23.7	12.6	0.5	chr6	1956196	1956390	(168849589)	C	MER58A	DNA/hAT-Charlie	(2)	222	1	3316768
18	12.6	0.0	0.0	chr6	2028983	2029009	(168776970)	+	(T)n	Simple_repeat	1	27	(0)	3316863
314	34.2	18.5	3.8	chr6	3452893	3453505	(167352474)	+	L3	LINE/CR1	3374	4097	(2)	3318911
221	27.5	9.0	3.5	chr6	3506855	3507055	(167298924)	C	MIRb	SINE/MIR	(0)	262	33	3319008
1078	28.5	8.8	1.6	chr6	3507071	3507565	(167298414)	C	L1MC5a	LINE/L1	(2232)	545	12	3319009
29	0.0	0.0	2.9	chr6	3511327	3511361	(167294618)	+	(TG)n	Simple_repeat	1	35	(0)	3319017
40	10.5	0.0	0.0	chr6	3511361	3511422	(167294557)	+	(GAGAGA)n	Simple_repeat	1	62	(0)	3319018
1273	25.2	7.4	3.3	chr6	3511574	3511639	(167294340)	+	LTR16A2	LTR/ERVL	10	69	(426)	3319019
2345	12.7	8.3	0.2	chr6	3511640	3512035	(167293944)	+	MSTB1	LTR/ERVL-MaLR	2	432	(0)	3319020
437	32.5	10.0	3.5	chr6	5314015	5314329	(165491650)	C	L2a	LINE/L2	(495)	2924	2587	3321845
496	28.1	9.9	0.0	chr6	6678310	6678455	(164127524)	+	MIRb	SINE/MIR	99	260	(8)	3323745
23	24.1	1.6	0.0	chr6	6678541	6678601	(164127378)	+	(CACA)n	Simple_repeat	1	62	(0)	3323746
1623	22.2	7.2	3.1	chr6	7114728	7115177	(163690802)	C	Tigger11a	DNA/TcMar-Tigger	(58)	677	208	3324633
12	9.3	5.0	7.1	chr6	7541708	7541747	(163264232)	+	(CTCCCG)n	Simple_repeat	1	42	(0)	3325357
24	19.6	0.0	0.0	chr6	9251155	9251201	(161554778)	+	(CA)n	Simple_repeat	1	47	(0)	3327839
356	27.8	5.3	2.7	chr6	10309784	10309894	(160496085)	+	MIR3	SINE/MIR	92	205	(3)	3329289
50	0.0	0.0	0.0	chr6	10423592	10423634	(160382345)	+	(TG)n	Simple_repeat	1	43	(0)	3329457
16	0.0	0.0	0.0	chr6	11270368	11270385	(159535594)	+	(T)n	Simple_repeat	1	18	(0)	3330978
404	24.8	15.3	0.6	chr6	13395536	13395697	(157410282)	+	MIRb	SINE/MIR	76	265	(3)	3334187
229	29.5	11.3	1.3	chr6	13574911	13575212	(157230767)	C	L2a	LINE/L2	(689)	2730	2395	3334514
17	13.4	0.0	2.9	chr6	13924389	13924423	(156881556)	+	GA-rich	Low_complexity	1	35	(0)	3335168
18	19.2	2.0	2.0	chr6	13924572	13924620	(156881359)	+	(GGT)n	Simple_repeat	1	50	(0)	3335169
523	13.6	2.4	0.0	chr6	15148229	15148309	(155657670)	+	Charlie24	DNA/hAT-Charlie	2350	2432	(18)	3337366
552	24.4	1.1	8.3	chr6	15952721	15952842	(154853137)	C	MER5B	DNA/hAT-Charlie	(0)	178	68	3338746
542	21.3	1.8	0.0	chr6	15952843	15952950	(154853029)	C	MER81	DNA/hAT-Blackjack	(3)	111	2	3338747
16	20.2	0.0	4.1	chr6	16129126	16129174	(154676805)	+	G-rich	Low_complexity	1	49	(0)	3339045
510	36.2	15.4	0.6	chr6	16277566	16277912	(154528067)	C	L2b	LINE/L2	(3)	3372	2965	3339271
271	7.8	0.7	0.0	chr6	16684472	16684527	(154121452)	C	FRAM	SINE/Alu	(28)	138	104	3339903
331	25.2	17.3	0.0	chr6	16684543	16684657	(154121322)	C	MIR3	SINE/MIR	(46)	162	24	3339904
20	20.5	0.0	0.0	chr6	16759989	16760033	(154045946)	+	(CACA)n	Simple_repeat	1	45	(0)	3340012
13	15.4	5.3	2.5	chr6	17393473	17393510	(153412469)	+	(CCT)n	Simple_repeat	1	40	(0)	3341078
14	19.8	1.7	6.7	chr6	17393641	17393699	(153412280)	+	G-rich	Low_complexity	1	60	(0)	3341079
1381	17.6	5.7	4.7	chr6	17447041	17447319	(153358660)	C	AluJr	SINE/Alu	(30)	282	1	3341180
380	28.8	9.7	0.0	chr6	17486764	17486902	(153319077)	C	LTR85a	LTR/Gypsy?	(0)	702	549	3341239
295	22.5	9.8	3.2	chr6	17497697	17497820	(153308159)	+	Tigger10	DNA/TcMar-Tigger	827	959	(885)	3341260
2306	11.0	0.3	0.3	chr6	18307724	18308032	(152497947)	C	AluSc	SINE/Alu	(0)	309	1	3342836
2349	10.7	0.3	0.0	chr6	18512685	18512993	(152292986)	+	AluSx1	SINE/Alu	1	310	(2)	3343190
434	30.7	9.4	1.2	chr6	18513217	18513381	(152292598)	+	MIRb	SINE/MIR	74	253	(15)	3343191
41	0.0	0.0	0.0	chr6	20211970	20212004	(150593975)	+	(AC)n	Simple_repeat	1	35	(0)	3345604
2338	12.1	1.0	0.0	chr6	20516210	20516507	(150289472)	C	AluSx	SINE/Alu	(11)	301	1	3346195
438	32.2	6.7	11.8	chr6	20516508	20516563	(150289416)	+	MLT1K	LTR/ERVL-MaLR	105	159	(436)	3346194
330	16.7	0.0	0.0	chr6	20516564	20516617	(150289362)	+	L1MB7	LINE/L1	6131	6184	(0)	3346196
13	4.2	8.0	0.0	chr6	21953991	21954015	(148851964)	+	(GTGCA)n	Simple_repeat	1	27	(0)	3348606
18	4.5	0.0	0.0	chr6	24358126	24358148	(146447831)	+	(AC)n	Simple_repeat	1	23	(0)	3351756
1299	12.7	1.4	20.7	chr6	24358330	24358692	(146447287)	+	AluJr	SINE/Alu	2	293	(19)	3351757
781	18.4	0.0	0.0	chr6	24359617	24359730	(146446249)	+	AluJo	SINE/Alu	3	116	(196)	3351759
16	8.3	0.0	0.0	chr6	24359731	24359756	(146446223)	+	(GGAA)n	Simple_repeat	1	26	(0)	3351760
12	28.7	1.9	1.9	chr6	24359983	24360035	(146445944)	+	G-rich	Low_complexity	1	54	(0)	3351761
11	20.7	5.1	0.0	chr6	25992617	25992655	(144813324)	+	(GCGCCT)n	Simple_repeat	1	41	(0)	3354452
1521	11.7	8.2	9.3	chr6	26053468	26053650	(144752329)	C	Tigger7	DNA/TcMar-Tigger	(38)	2453	2283	3354557
2219	9.0	0.0	0.0	chr6	26053651	26053940	(144752039)	+	AluSx1	SINE/Alu	10	299	(13)	3354558
1521	11.7	8.2	9.3	chr6	26053941	26054077	(144751902)	C	Tigger7	DNA/TcMar-Tigger	(209)	2282	2137	3354557
651	0.0	0.0	0.0	chr6	26313124	26313195	(144492784)	C	tRNA-Met-i	tRNA	(3)	72	1	3354999
327	17.7	3.1	0.0	chr6	26322418	26322479	(144483500)	C	AluYb8	SINE/Alu	(18)	300	237	3355022
1329	5.7	0.0	0.6	chr6	26322481	26322639	(144483340)	C	AluSq4	SINE/Alu	(153)	158	1	3355023
667	1.3	0.0	0.0	chr6	26331441	26331515	(144474464)	C	tRNA-Trp-TGG	tRNA	(0)	75	1	3355039
20	7.9	0.0	0.0	chr6	27213509	27213535	(143592444)	+	(A)n	Simple_repeat	1	27	(0)	3356486
2183	8.9	0.0	0.0	chr6	27213536	27213815	(143592164)	+	AluSq2	SINE/Alu	1	280	(33)	3356487
671	0.0	0.0	0.0	chr6	27213844	27213916	(143592063)	C	tRNA-Arg-CGY_	tRNA	(3)	73	1	3356488
678	4.8	0.0	0.0	chr6	27230555	27230637	(143575342)	C	tRNA-Leu-TTA	tRNA	(3)	83	1	3356540
691	3.7	0.0	0.0	chr6	27297996	27298077	(143507902)	+	tRNA-Ser-AGY	tRNA	1	82	(3)	3356672
650	0.0	0.0	0.0	chr6	27332985	27333056	(143472923)	C	tRNA-Met-i	tRNA	(3)	72	1	3356727
748	2.4	0.0	0.0	chr6	27505828	27505909	(143300070)	C	tRNA-Ser-TCA_	tRNA	(3)	82	1	3357009
665	1.4	0.0	0.0	chr6	27591814	27591886	(143214093)	C	tRNA-Lys-AAA	tRNA	(3)	73	1	3357178
651	0.0	0.0	0.0	chr6	27592821	27592892	(143213087)	C	tRNA-Met-i	tRNA	(3)	72	1	3357179
903	26.0	9.9	1.5	chr6	27651169	27651508	(143154471)	+	L1ME3A	LINE/L1	5643	6014	(159)	3357300
31	0.0	0.0	0.0	chr6	27651559	27651585	(143154394)	+	(GT)n	Simple_repeat	1	27	(0)	3357301
252	23.7	0.0	6.3	chr6	27651713	27651775	(143154204)	C	MLT2D	LTR/ERVL	(65)	495	437	3357302
3202	18.2	2.8	4.3	chr6	27651806	27652595	(143153384)	+	L1MB3	LINE/L1	3169	3946	(2194)	3357303
1009	24.6	16.1	4.0	chr6	27672796	27673090	(143132889)	+	L2	LINE/L2	1073	1426	(1993)	3357342
2085	9.2	0.7	3.3	chr6	27673091	27673393	(143132586)	+	AluSx	SINE/Alu	2	296	(16)	3357343
648	1.4	0.0	0.0	chr6	27688188	27688261	(143117718)	+	tRNA-Ile-ATT	tRNA	1	74	(3)	3357376
368	30.4	5.9	3.5	chr6	28728211	28728442	(142077537)	C	LTR37-int	LTR/ERV1	(1517)	2543	2306	3359106
52	0.0	0.0	0.0	chr6	28728557	28728603	(142077376)	+	(TTTGT)n	Simple_repeat	1	47	(0)	3359107
19	0.0	0.0	0.0	chr6	28728604	28728624	(142077355)	+	(GT)n	Simple_repeat	1	21	(0)	3359108
1142	3.2	0.0	0.0	chr6	28728625	28728750	(142077229)	C	AluYj4	SINE/Alu	(29)	282	157	3359109
600	16.8	0.8	15.5	chr6	28737820	28737974	(142068005)	C	FLAM_C	SINE/Alu	(169)	133	2	3359122
227	23.9	2.7	2.7	chr6	28737915	28737987	(142067992)	+	SVA_E	Retroposon/SVA	133	205	(1177)	3359123
2416	6.0	1.3	0.0	chr6	28790370	28790670	(142015309)	+	AluSp	SINE/Alu	2	306	(7)	3359224
15	14.4	0.0	0.0	chr6	28790694	28790718	(142015261)	+	(A)n	Simple_repeat	1	25	(0)	3359225
661	1.4	0.0	0.0	chr6	28790722	28790794	(142015185)	C	tRNA-Phe-TTY	tRNA	(3)	73	1	3359226
10151	11.8	4.0	0.2	chr6	28865488	28867004	(141938975)	C	LTR12C	LTR/ERV1	(0)	1579	3	3359357
228	31.8	13.2	1.4	chr6	30152381	30152600	(140653379)	C	Tigger19b	DNA/TcMar-Tigger	(90)	460	211	3361157
13	22.5	2.0	3.9	chr6	30345413	30345462	(140460517)	+	G-rich	Low_complexity	1	51	(0)	3361461
16	20.9	0.0	0.0	chr6	30345612	30345644	(140460335)	+	G-rich	Low_complexity	1	33	(0)	3361462
2066	7.9	7.4	0.4	chr6	31542686	31542962	(139263017)	C	AluSx1	SINE/Alu	(14)	298	1	3363472
14	31.5	4.2	0.0	chr6	31547178	31547249	(139258730)	+	(TTTTGT)n	Simple_repeat	1	75	(0)	3363480
15	16.0	2.9	0.0	chr6	31547391	31547425	(139258554)	+	(CCCTC)n	Simple_repeat	1	36	(0)	3363481
27	6.1	0.0	0.0	chr6	31620910	31620944	(139185035)	+	(GGTGGC)n	Simple_repeat	1	35	(0)	3363641
47	0.0	0.0	0.0	chr6	31652321	31652360	(139153619)	+	(AC)n	Simple_repeat	1	40	(0)	3363672
50	0.0	0.0	0.0	chr6	31735808	31735850	(139070129)	+	(CA)n	Simple_repeat	1	43	(0)	3363796
16	0.0	0.0	0.0	chr6	31916751	31916768	(138889211)	+	(T)n	Simple_repeat	1	18	(0)	3364172
718	11.6	0.0	0.0	chr6	31916795	31916889	(138889090)	+	AluSx3	SINE/Alu	210	304	(7)	3364173
2348	10.5	0.3	0.0	chr6	31916890	31917195	(138888784)	+	AluSx1	SINE/Alu	1	307	(5)	3364174
19	20.2	2.1	2.1	chr6	32583868	32583914	(138222065)	+	(CA)n	Simple_repeat	1	48	(0)	3365100
31	9.3	0.0	0.0	chr6	32583974	32584017	(138221962)	+	(CT)n	Simple_repeat	1	44	(0)	3365101
48	0.0	0.0	0.0	chr6	32584018	32584058	(138221921)	+	(CA)n	Simple_repeat	1	41	(0)	3365102
2041	22.6	3.0	2.4	chr6	32635466	32635931	(138170048)	C	MER90a	LTR/ERV1	(141)	473	5	3365178
83	18.2	2.5	5.6	chr6	33420013	33420256	(137385723)	+	(CCT)n	Simple_repeat	1	250	(0)	3366422
974	17.0	5.0	2.9	chr6	34070977	34073549	(136732430)	+	(CA)n	Simple_repeat	1	2702	(0)	3367583
23	25.1	0.0	0.0	chr6	34132556	34132614	(136673365)	+	(TCTG)n	Simple_repeat	1	59	(0)	3367692
187	15.3	1.9	0.0	chr6	34684496	34684541	(136121438)	C	L2b	LINE/L2	(3)	3423	3341	3368911
1034	19.8	2.4	1.4	chr6	34688978	34689187	(136116792)	+	L1MB5	LINE/L1	5931	6142	(32)	3368913
946	17.9	1.6	4.2	chr6	34689188	34689377	(136116602)	+	FAM	SINE/Alu	1	185	(0)	3368920
197	27.7	5.1	5.9	chr6	35181755	35181873	(135624106)	C	L2b	LINE/L2	(20)	3355	3238	3369861
239	31.2	4.0	0.0	chr6	35182034	35182129	(135623850)	C	L2a	LINE/L2	(14)	3412	3313	3369862
199	17.5	1.7	12.3	chr6	35220121	35220185	(135585794)	C	L2c	LINE/L2	(34)	3353	3296	3369932
260	22.3	13.9	0.9	chr6	35220190	35220300	(135585679)	+	MIRc	SINE/MIR	1	127	(141)	3369933
186	28.9	9.1	3.2	chr6	35259014	35259106	(135546873)	+	MIRc	SINE/MIR	98	196	(72)	3369992
516	26.7	21.9	0.5	chr6	35451111	35451556	(135354423)	+	L2c	LINE/L2	2819	3421	(5)	3370411
16	8.3	0.0	0.0	chr6	35728127	35728152	(135077827)	+	(CGGG)n	Simple_repeat	1	26	(0)	3371015
14	13.4	5.9	0.0	chr6	35728153	35728160	(135077819)	+	(CGAG)n	Simple_repeat	1	36	(0)	3371016
13	31.6	0.0	0.0	chr6	35731963	35732013	(135073966)	+	G-rich	Low_complexity	1	51	(0)	3371023
213	28.3	13.8	0.0	chr6	36131612	36131717	(134674262)	C	MIR	SINE/MIR	(90)	172	50	3371856
642	29.8	14.1	0.0	chr6	36131751	36131975	(134674004)	C	MIR	SINE/MIR	(0)	262	1	3371857
427	22.5	5.1	0.9	chr6	36314701	36314812	(134491167)	+	L2a	LINE/L2	3309	3425	(1)	3372230
491	31.4	1.7	2.9	chr6	36314837	36315010	(134490969)	+	MIRc	SINE/MIR	20	191	(77)	3372231
2038	6.5	1.2	0.4	chr6	36593295	36593541	(134212438)	C	AluSx1	SINE/Alu	(63)	249	1	3372884
2049	10.8	3.7	0.0	chr6	36608167	36608454	(134197525)	+	AluSp	SINE/Alu	1	299	(14)	3372900
269	24.3	12.7	10.6	chr6	36615459	36615619	(134190360)	C	MIRb	SINE/MIR	(1)	267	103	3372918
2120	11.3	3.3	0.3	chr6	36654619	36654910	(134151069)	C	AluSq2	SINE/Alu	(12)	301	1	3373018
1097	24.6	7.0	3.0	chr6	36654952	36655323	(134150656)	C	MLT1G1	LTR/ERVL-MaLR	(7)	572	185	3373019
1979	12.4	3.9	0.0	chr6	36724135	36724456	(134081523)	C	AluSx	SINE/Alu	(0)	312	1	3373161
63	1.7	0.0	0.0	chr6	36724638	36724698	(134081281)	+	(AACC)n	Simple_repeat	1	61	(0)	3373162
706	23.8	2.6	1.1	chr6	36947920	36948106	(133857873)	C	MIR	SINE/MIR	(0)	262	73	3373621
281	23.2	6.8	1.2	chr6	36948142	36948224	(133857755)	+	L2b	LINE/L2	3288	3375	(0)	3373622
1974	16.9	0.0	0.0	chr6	37029640	37029934	(133776045)	C	AluJr4	SINE/Alu	(15)	297	3	3373763
1037	13.7	0.0	0.6	chr6	37204431	37204592	(133601387)	+	L1PA15	LINE/L1	5870	6030	(135)	3374230
2316	11.6	0.0	0.0	chr6	37204603	37204912	(133601067)	+	AluSz	SINE/Alu	2	311	(1)	3374231
1760	27.1	6.7	2.3	chr6	37207620	37208528	(133597451)	C	L2a	LINE/L2	(1)	3425	2449	3374237
895	27.6	6.0	11.6	chr6	37244688	37245134	(133560845)	C	MLT1H	LTR/ERVL-MaLR	(25)	524	105	3374321
355	23.0	0.0	13.8	chr6	37283437	37283552	(133522427)	C	L2c	LINE/L2	(0)	3387	3288	3374412
13	28.9	0.0	0.0	chr6	37433291	37433332	(133372647)	+	(GGC)n	Simple_repeat	1	42	(0)	3374686
13	27.1	0.0	3.9	chr6	37433376	37433427	(133372552)	+	(GCGG)n	Simple_repeat	1	52	(0)	3374687
421	32.9	12.5	1.8	chr6	37690794	37691191	(133114788)	+	L2c	LINE/L2	2930	3426	(0)	3375143
610	34.2	1.8	1.8	chr6	37691225	37691450	(133114529)	+	MIRc	SINE/MIR	40	265	(3)	3375144
362	29.7	1.7	2.5	chr6	39210606	39210726	(131595253)	C	L2c	LINE/L2	(4)	3383	3264	3377656
557	26.4	3.6	2.5	chr6	40571105	40571267	(130234712)	+	L2c	LINE/L2	3216	3380	(7)	3379692
181	27.0	0.0	0.0	chr6	40714892	40714928	(130091051)	C	MamRTE1	LINE/RTE-BovB	(141)	3671	3635	3379969
188	21.2	0.0	0.0	chr6	40714931	40714963	(130091016)	C	MamRTE1	LINE/RTE-BovB	(151)	3661	3629	3379969
661	31.2	9.2	5.2	chr6	41455876	41456301	(129349678)	+	MER65A	LTR/ERV1	1	445	(0)	3381194
1892	19.3	5.4	2.0	chr6	41456302	41456369	(129349610)	+	MLT1C	LTR/ERVL-MaLR	400	466	(1)	3381193
57	0.0	0.0	0.0	chr6	41456391	41456439	(129349540)	+	(AC)n	Simple_repeat	1	49	(0)	3381195
29	20.4	1.2	3.7	chr6	41456713	41456793	(129349186)	+	(CTCC)n	Simple_repeat	1	82	(0)	3381196
352	34.5	5.5	0.0	chr6	41528824	41528962	(129277017)	+	MIRb	SINE/MIR	3	149	(119)	3381345
29	24.1	5.8	1.6	chr6	41546257	41546376	(129259603)	+	(CTCG)n	Simple_repeat	1	127	(0)	3381373
15	12.6	8.9	2.0	chr6	41786632	41786676	(129019303)	+	(CGG)n	Simple_repeat	1	49	(0)	3381816
19	14.0	0.0	2.4	chr6	42453070	42453110	(128352869)	+	G-rich	Low_complexity	1	41	(0)	3383279
29	0.0	0.0	0.0	chr6	42929620	42929646	(127876333)	+	(TGC)n	Simple_repeat	1	27	(0)	3384362
597	34.0	6.6	0.4	chr6	43182946	43183203	(127622776)	C	MIRb	SINE/MIR	(0)	268	3	3384873
15	18.1	3.1	0.0	chr6	43247644	43247675	(127558304)	+	(GT)n	Simple_repeat	1	33	(0)	3385001
2195	8.0	0.0	1.0	chr6	43630459	43630759	(127175220)	+	AluSx	SINE/Alu	2	299	(13)	3385710
22	14.9	0.0	0.0	chr6	43769692	43769738	(127036241)	+	(GT)n	Simple_repeat	1	47	(0)	3385987
398	29.5	2.5	8.2	chr6	43926257	43926365	(126879614)	C	L2	LINE/L2	(600)	2819	2710	3386261
12	16.4	5.9	0.0	chr6	44246276	44246309	(126559670)	+	(CATCC)n	Simple_repeat	1	36	(0)	3386851
279	19.8	12.0	0.0	chr6	44478987	44479067	(126326912)	C	UCON37	Unknown	(0)	143	52	3387261
680	23.7	5.0	3.7	chr6	44479189	44479411	(126326568)	C	L1ME2z	LINE/L1	(1)	6178	5938	3387262
14	13.7	3.1	0.0	chr6	45377643	45377674	(125428305)	+	G-rich	Low_complexity	1	33	(0)	3388538
248	31.8	0.0	1.1	chr6	45416665	45416753	(125389226)	+	MER135	DNA	40	127	(101)	3388612
41	17.1	3.5	0.0	chr6	46734307	46734391	(124071588)	+	GA-rich	Low_complexity	1	88	(0)	3390625
16	0.0	4.2	4.0	chr6	46734392	46734415	(124071564)	+	(GT)n	Simple_repeat	1	25	(0)	3390626
94	0.0	1.1	1.1	chr6	46734416	46734503	(124071476)	+	(GA)n	Simple_repeat	1	89	(0)	3390627
2324	11.0	1.0	1.0	chr6	46734541	46734849	(124071130)	+	AluSc8	SINE/Alu	1	309	(2)	3390628
13	13.3	6.1	0.0	chr6	46735340	46735372	(124070607)	+	(GGCG)n	Simple_repeat	1	35	(0)	3390629
1206	16.8	22.0	2.5	chr6	47140813	47141208	(123664771)	C	LTR54B	LTR/ERV1	(2)	496	2	3391297
2013	12.0	0.7	6.0	chr6	47141324	47141640	(123664339)	+	AluSz6	SINE/Alu	1	300	(12)	3391298
15	0.0	0.0	0.0	chr6	47478192	47478210	(123327769)	+	(GGA)n	Simple_repeat	1	19	(0)	3391825
18	19.9	0.0	0.0	chr6	47484352	47484386	(123321593)	+	(T)n	Simple_repeat	1	35	(0)	3391832
1623	18.2	0.0	3.9	chr6	47628677	47628984	(123176995)	C	AluJb	SINE/Alu	(12)	300	5	3392042
195	31.6	3.8	3.6	chr6	52243516	52243608	(118562371)	+	MIRb	SINE/MIR	85	184	(24)	3398202
2180	10.7	1.4	0.0	chr6	52243768	52244058	(118561921)	C	AluSx1	SINE/Alu	(17)	295	1	3398203
194	29.0	2.8	5.5	chr6	53827695	53827767	(116978212)	+	MIRc	SINE/MIR	9	79	(189)	3400795
225	26.7	5.3	2.2	chr6	53827810	53827901	(116978078)	+	MIRc	SINE/MIR	173	267	(1)	3400795
202	23.8	5.6	4.5	chr6	53827905	53827992	(116977987)	C	L2	LINE/L2	(497)	2922	2834	3400796
357	32.4	2.6	2.6	chr6	53828002	53828153	(116977826)	+	Tigger16b	DNA/TcMar-Tigger	179	330	(6)	3400797
265	26.9	16.2	0.6	chr6	56550200	56550371	(114255608)	C	Helitron2Na_Mam	RC?/Helitron?	(76)	248	45	3404298
180	24.3	0.0	0.0	chr6	56550452	56550488	(114255491)	C	MIRc	SINE/MIR	(19)	249	213	3404299
2949	18.6	5.1	3.0	chr6	69894659	69895395	(100910584)	C	MER61-int	LTR/ERV1	(4430)	787	1	3418561
1129	21.3	16.7	5.0	chr6	70172042	70172481	(100633498)	C	L2a	LINE/L2	(1)	3425	2924	3418878
42	0.0	0.0	0.0	chr6	72623392	72623427	(98182552)	+	(GT)n	Simple_repeat	1	36	(0)	3422095
2032	13.8	0.3	0.7	chr6	73550941	73551238	(97254741)	+	AluSx1	SINE/Alu	1	297	(15)	3423733
15	8.1	0.0	0.0	chr6	73551247	73551259	(97254720)	+	(AAT)n	Simple_repeat	1	13	(0)	3423734
1487	14.1	16.2	0.0	chr6	73551260	73551507	(97254472)	+	AluSz	SINE/Alu	1	296	(16)	3423735
15	8.1	0.0	0.0	chr6	73551508	73551520	(97254459)	+	(AAT)n	Simple_repeat	2	14	(0)	3423736
918	20.2	21.1	6.3	chr6	78199129	78199492	(92606487)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	3429678
18	10.8	0.0	0.0	chr6	79078201	79078230	(91727749)	+	(GGA)n	Simple_repeat	1	30	(0)	3430771
3208	17.3	0.9	0.6	chr6	79384562	79385107	(91420872)	C	MER68	LTR/ERVL	(3)	560	13	3431148
641	30.2	20.5	1.9	chr6	79686829	79687418	(91118561)	C	HAL1ME	LINE/L1	(1746)	719	8	3431617
29	27.7	0.8	4.2	chr6	79869026	79869056	(90936923)	+	(TTTG)n	Simple_repeat	1	51	(66)	3431883
19	29.7	0.0	0.0	chr6	79869057	79869110	(90936869)	+	(TG)n	Simple_repeat	1	54	(0)	3431884
29	27.7	0.8	4.2	chr6	79869111	79869147	(90936832)	+	(TTTG)n	Simple_repeat	52	117	(0)	3431883
186	36.7	4.8	2.1	chr6	80457320	80457461	(90348518)	C	AmnSINE1	SINE/5S-Deu-L2	(396)	179	34	3432638
268	32.6	15.0	1.1	chr6	82877094	82877270	(87928709)	C	L1MEd	LINE/L1	(6264)	822	617	3435733
279	33.3	0.0	0.0	chr6	82877278	82877355	(87928624)	+	MERX	DNA/TcMar-Tigger	310	387	(369)	3435734
31	23.0	0.9	4.7	chr6	83067992	83068096	(87737883)	+	G-rich	Low_complexity	1	106	(0)	3436015
899	26.8	6.2	0.8	chr6	83723819	83724063	(87081916)	+	MLT1I	LTR/ERVL-MaLR	5	263	(148)	3436892
422	35.4	6.3	1.1	chr6	83724094	83724273	(87081706)	+	L2	LINE/L2	2674	2863	(556)	3436893
2038	11.5	12.3	0.0	chr6	83867684	83867996	(86937983)	+	LTR18A	LTR/ERVL	1	357	(0)	3437088
335	33.0	4.8	3.3	chr6	84442662	84442905	(86363074)	C	L2c	LINE/L2	(222)	3165	2918	3437853
20	22.7	0.0	1.9	chr6	84763995	84764047	(86041932)	+	(CGC)n	Simple_repeat	1	53	(0)	3438230
17	24.5	2.0	0.0	chr6	85642957	85642998	(85162981)	+	(CG)n	Simple_repeat	1	43	(0)	3439341
26	3.1	3.0	0.0	chr6	85642999	85643031	(85162948)	+	(CCCTT)n	Simple_repeat	1	34	(0)	3439342
15	23.8	2.8	5.5	chr6	85643038	85643108	(85162871)	+	(TCC)n	Simple_repeat	1	73	(0)	3439343
23	27.2	2.9	2.9	chr6	85643224	85643325	(85162654)	+	(CTCG)n	Simple_repeat	1	105	(0)	3439344
13	10.4	2.9	5.6	chr6	85643759	85643793	(85162186)	+	(CGCGCC)n	Simple_repeat	1	36	(0)	3439347
15	0.0	6.2	5.9	chr6	85679150	85679181	(85126798)	+	(GCTG)n	Simple_repeat	1	34	(0)	3439430
350	24.2	0.1	0.0	chr6	85679445	85679519	(85126460)	C	MIRc	SINE/MIR	(53)	155	81	3439431
12	8.0	7.4	0.0	chr6	87322572	87322598	(83483381)	+	(GGCGG)n	Simple_repeat	1	29	(0)	3441372
327	30.6	3.2	2.4	chr6	90137905	90138028	(80667951)	+	MIR3	SINE/MIR	73	197	(11)	3445944
43	0.0	0.0	0.0	chr6	90138054	90138090	(80667889)	+	(AC)n	Simple_repeat	1	37	(0)	3445945
17	5.0	0.0	0.0	chr6	90138091	90138111	(80667868)	+	(TC)n	Simple_repeat	1	21	(0)	3445946
2347	11.5	1.6	0.0	chr6	90138221	90138524	(80667455)	+	AluSx	SINE/Alu	1	309	(3)	3445947
675	28.0	5.5	2.6	chr6	90186699	90186929	(80619050)	C	MIRb	SINE/MIR	(11)	257	20	3446011
461	29.2	4.7	2.2	chr6	90187745	90187947	(80618032)	C	MIR	SINE/MIR	(10)	252	50	3446012
423	26.4	11.5	6.1	chr6	90393100	90393313	(80412666)	+	MIR	SINE/MIR	35	254	(14)	3446327
363	31.5	7.8	1.6	chr6	90753775	90753967	(80052012)	+	MIRb	SINE/MIR	41	238	(24)	3446818
199	41.1	0.9	0.0	chr6	90911879	90911985	(79893994)	+	MIR3	SINE/MIR	28	135	(73)	3447012
41	0.0	0.0	0.0	chr6	96924802	96924836	(73881143)	+	(CA)n	Simple_repeat	1	35	(0)	3454325
2216	8.7	4.3	0.3	chr6	99548537	99548823	(71257156)	+	AluSx1	SINE/Alu	5	303	(9)	3457836
468	33.0	9.5	3.2	chr6	99548849	99549064	(71256915)	C	MIRb	SINE/MIR	(17)	251	21	3457837
62	0.0	0.0	0.0	chr6	100107643	100107695	(70698284)	+	(TG)n	Simple_repeat	1	53	(0)	3458584
13	20.8	0.0	0.0	chr6	100881277	100881309	(69924670)	+	(CAGA)n	Simple_repeat	1	33	(0)	3459593
15	9.3	7.8	5.5	chr6	100881405	100881455	(69924524)	+	(CCTCCG)n	Simple_repeat	1	55	(0)	3459594
13	23.8	2.2	2.1	chr6	104859847	104859892	(65946087)	+	(CCG)n	Simple_repeat	1	47	(0)	3464541
500	26.3	7.8	5.5	chr6	105181457	105181693	(65624286)	C	LTR35B	LTR/ERV1	(93)	512	270	3465087
1007	24.0	7.4	6.8	chr6	105181935	105182406	(65623573)	+	MLT1E1A	LTR/ERVL-MaLR	26	591	(89)	3465088
15	7.0	6.7	0.0	chr6	107459945	107459974	(63346005)	+	(TGGCAG)n	Simple_repeat	1	32	(0)	3468896
24	23.5	3.6	2.3	chr6	107958112	107958194	(62847785)	+	(GCC)n	Simple_repeat	1	86	(0)	3469654
11	24.4	4.0	1.9	chr6	108654285	108654334	(62151645)	+	(AATAAT)n	Simple_repeat	1	52	(0)	3470937
22182	9.2	1.4	1.0	chr6	109678656	109682143	(61123836)	+	L1PA7	LINE/L1	1	3508	(2953)	3472524
6463	17.6	5.4	4.0	chr6	109834034	109834958	(60971021)	C	Charlie1a	DNA/hAT-Charlie	(483)	972	2	3472732
341	28.8	8.6	3.0	chr6	109835039	109835235	(60970744)	+	L2c	LINE/L2	3176	3384	(3)	3472735
4735	13.1	5.1	1.7	chr6	111300569	111301505	(59504474)	+	MER11B	LTR/ERVK	34	1169	(97)	3475375
451	33.1	5.4	6.7	chr6	111567971	111568401	(59237578)	+	Plat_L3	LINE/CR1	2911	3335	(251)	3475843
68	0.0	0.0	0.0	chr6	111568433	111568490	(59237489)	+	(GT)n	Simple_repeat	1	58	(0)	3475844
488	11.9	1.5	0.0	chr6	111568636	111568702	(59237277)	+	AluSz	SINE/Alu	1	68	(244)	3475845
438	26.1	7.5	1.6	chr6	111712550	111712736	(59093243)	+	MIRb	SINE/MIR	70	268	(0)	3476084
18	24.6	0.0	0.0	chr6	116100826	116100873	(54705106)	+	(GCCCC)n	Simple_repeat	1	48	(0)	3482130
297	27.6	6.8	1.3	chr6	116615664	116615817	(54190162)	+	Tigger14a	DNA/TcMar-Tigger	83	245	(79)	3482820
32	26.9	0.0	3.7	chr6	116616035	116616141	(54189838)	+	(TCCC)n	Simple_repeat	1	107	(0)	3482821
17	8.2	3.9	0.0	chr6	116616124	116616149	(54189830)	+	(CA)n	Simple_repeat	1	27	(0)	3482822
22	0.0	0.0	0.0	chr6	118709533	118709556	(52096423)	+	(GT)n	Simple_repeat	1	24	(0)	3485554
31	0.0	0.0	0.0	chr6	118709557	118709583	(52096396)	+	(GA)n	Simple_repeat	1	27	(0)	3485555
227	27.0	2.6	1.3	chr6	118722382	118722456	(52083523)	+	MIR3	SINE/MIR	68	143	(65)	3485582
3185	9.6	5.3	0.5	chr6	118951353	118951801	(51854178)	+	MER4A1	LTR/ERV1	1	472	(0)	3485899
4331	9.3	5.3	2.7	chr6	118951802	118951818	(51854161)	+	L1MA3	LINE/L1	6673	6685	(336)	3485894
846	19.2	1.6	6.5	chr6	119076054	119076253	(51729726)	+	MER20	DNA/hAT-Charlie	27	216	(3)	3486085
15	26.9	2.6	5.0	chr6	123803350	123803427	(47002552)	+	(CGC)n	Simple_repeat	1	80	(0)	3492190
222	36.8	3.2	4.7	chr6	123841457	123841647	(46964332)	+	MamRTE1	LINE/RTE-BovB	1830	2017	(1795)	3492237
401	29.7	4.3	6.6	chr6	124040667	124040832	(46765147)	+	MIR	SINE/MIR	5	166	(96)	3492527
5970	18.0	5.7	2.9	chr6	124904290	124905474	(45900505)	+	L1MDa	LINE/L1	1125	2345	(4288)	3493557
671	30.8	10.5	2.0	chr6	125104354	125104694	(45701285)	+	L4_C_Mam	LINE/RTE-X	16	388	(4750)	3493856
2001	17.6	4.4	3.0	chr6	125265458	125265827	(45540152)	+	Tigger2a	DNA/TcMar-Tigger	1	372	(62)	3494091
57	41.1	0.0	1.4	chr6	125301977	125302258	(45503721)	+	(CCTCCC)n	Simple_repeat	1	282	(0)	3494128
12373	10.3	1.1	2.4	chr6	126613441	126615545	(44190434)	C	L1PA7	LINE/L1	(4404)	2095	1	3495830
1208	21.7	12.0	6.7	chr6	129184410	129184843	(41621136)	+	MER31B	LTR/ERV1	7	661	(0)	3499123
54	0.0	0.0	0.0	chr6	134052251	134052296	(36753683)	+	(AC)n	Simple_repeat	1	46	(0)	3506090
226	28.4	2.4	4.7	chr6	136015195	136015279	(34790700)	+	X6B_LINE	LINE/CR1	985	1067	(5)	3509250
199	23.9	11.5	4.2	chr6	136249810	136249905	(34556074)	C	MIR3	SINE/MIR	(53)	155	52	3509584
2572	20.2	9.1	0.7	chr6	137665033	137665644	(33140335)	C	LTR65	LTR/ERV1	(0)	669	1	3511791
17	8.1	0.0	0.0	chr6	138107093	138107118	(32698861)	+	(GGC)n	Simple_repeat	1	26	(0)	3512465
24	16.1	7.0	1.3	chr6	138107346	138107416	(32698563)	+	(CGGAG)n	Simple_repeat	1	76	(0)	3512466
2594	14.5	7.4	0.0	chr6	138818558	138819005	(31986974)	C	MER31A	LTR/ERV1	(1)	484	1	3513611
31	0.0	0.0	0.0	chr6	139152419	139152445	(31653534)	+	(TG)n	Simple_repeat	1	27	(0)	3514207
248	14.6	0.0	0.0	chr6	139981966	139982006	(30823973)	+	LTR91	LTR/ERVL	88	128	(71)	3515502
2322	10.2	0.0	0.7	chr6	142858600	142858893	(27947086)	C	AluSq2	SINE/Alu	(21)	292	1	3519072
293	28.1	16.9	5.9	chr6	142858933	142859068	(27946911)	+	L2c	LINE/L2	3234	3387	(0)	3519073
13	21.6	0.0	0.0	chr6	142944530	142944561	(27861418)	+	GA-rich	Low_complexity	1	32	(0)	3519175
41	2.6	0.0	0.0	chr6	143061109	143061148	(27744831)	+	(TG)n	Simple_repeat	1	40	(0)	3519337
16	7.5	3.6	0.0	chr6	143450810	143450837	(27355142)	+	(GCG)n	Simple_repeat	1	29	(0)	3519895
255	31.2	4.3	1.8	chr6	143513337	143513450	(27292529)	+	L2c	LINE/L2	3262	3378	(9)	3519993
1635	14.8	7.8	0.4	chr6	143513743	143514013	(27291966)	C	AluSx1	SINE/Alu	(17)	295	3	3519994
449	33.3	0.7	2.0	chr6	144266496	144266642	(26539337)	C	MIR3	SINE/MIR	(6)	202	58	3521135
15	28.8	0.0	2.0	chr6	144411770	144411820	(26394159)	+	(TCTCTT)n	Simple_repeat	1	51	(0)	3521388
14	8.9	0.0	0.0	chr6	145964100	145964123	(24841856)	+	(CCTC)n	Simple_repeat	1	24	(0)	3523417
26	29.8	2.3	3.7	chr6	149317406	149317536	(21488443)	+	(GCC)n	Simple_repeat	1	134	(0)	3528245
6814	16.1	5.2	0.6	chr6	149403976	149406045	(21399934)	+	L1MA9	LINE/L1	4361	6542	(6)	3528378
18	7.5	3.6	0.0	chr6	149545644	149545671	(21260308)	+	(CA)n	Simple_repeat	1	29	(0)	3528648
19	8.3	0.0	0.0	chr6	154510937	154510962	(16295017)	+	(A)n	Simple_repeat	1	26	(0)	3536517
2382	7.5	0.0	0.0	chr6	154511057	154511348	(16294631)	C	AluSx1	SINE/Alu	(20)	292	1	3536518
2120	7.8	0.0	1.1	chr6	158242819	158243086	(12562893)	C	AluSx3	SINE/Alu	(46)	265	1	3542210
1183	27.6	10.5	2.9	chr6	158255267	158255825	(12550154)	+	MLT1L	LTR/ERVL-MaLR	4	610	(0)	3542235
2648	3.4	0.0	0.0	chr6	158512060	158512352	(12293627)	+	AluY	SINE/Alu	1	293	(18)	3542645
682	21.0	17.0	4.3	chr6	158704127	158704286	(12101693)	+	MER58B	DNA/hAT-Charlie	85	269	(72)	3542981
104	25.1	6.1	2.2	chr6	158852933	158853360	(11952619)	+	(CA)n	Simple_repeat	1	454	(0)	3543240
268	36.8	14.3	1.9	chr6	159253062	159253548	(11552431)	+	MamRTE1	LINE/RTE-BovB	811	1368	(2444)	3543852
246	15.4	5.7	2.4	chr6	161374165	161374761	(9431218)	+	(GT)n	Simple_repeat	1	631	(0)	3546590
1013	32.2	3.7	1.9	chr6	165894202	165894727	(4911252)	+	L3	LINE/CR1	3108	3643	(456)	3552512
12	18.8	2.6	2.6	chr6	166006116	166006153	(4799826)	+	(CGCCCCC)n	Simple_repeat	1	39	(0)	3552665
50	27.6	0.0	1.6	chr6	166008859	166008987	(4796992)	+	(GT)n	Simple_repeat	1	129	(0)	3552666
1978	17.9	4.2	2.7	chr6	166402872	166403314	(4402665)	C	L1MB8	LINE/L1	(4)	6174	5725	3553228
1764	20.4	6.1	3.4	chr6	166711233	166712074	(4093905)	+	L1MDa	LINE/L1	946	1879	(1091)	3553558
210	31.5	6.4	0.0	chr7	191569	191641	(159154332)	C	Tigger19a	DNA/TcMar-Tigger	(105)	218	141	3558058
497	21.6	13.6	1.1	chr7	2162976	2163162	(157182811)	C	Tigger13a	DNA/TcMar-Tigger	(350)	421	208	3560850
194	32.6	4.5	2.3	chr7	2164047	2164134	(157181839)	+	L3	LINE/CR1	2825	2914	(1185)	3560852
415	21.1	0.0	0.0	chr7	2514469	2515278	(156830695)	+	(TCCA)n	Simple_repeat	1	810	(0)	3561569
292	28.4	12.9	2.8	chr7	2515299	2515495	(156830478)	C	L2c	LINE/L2	(3)	3384	3156	3561570
227	18.8	0.0	0.0	chr7	2758183	2758230	(156587743)	C	Charlie1b	DNA/hAT-Charlie	(92)	431	384	3561945
292	19.2	1.9	0.0	chr7	2758244	2758295	(156587678)	+	Alu	SINE/Alu	1	53	(80)	3561946
479	32.5	0.7	0.0	chr7	2758278	2758428	(156587545)	C	Charlie1	DNA/hAT-Charlie	(2547)	234	83	3561947
345	21.2	1.7	0.9	chr7	2758469	2758621	(156587352)	+	MLT1E1	LTR/ERVL-MaLR	52	255	(399)	3561948
247	28.7	7.6	0.8	chr7	2807318	2807440	(156538533)	+	MER124	DNA?	145	276	(121)	3562036
376	29.3	9.7	4.9	chr7	3235137	3235380	(156110593)	C	L2	LINE/L2	(509)	2910	2654	3562951
147	28.6	0.5	0.7	chr7	3235381	3235785	(156110188)	+	(GGT)n	Simple_repeat	1	407	(0)	3562952
167	23.8	2.8	0.9	chr7	3279177	3279609	(156066364)	+	GA-rich	Low_complexity	1	445	(0)	3563051
1230	22.2	4.4	0.9	chr7	4744257	4744606	(154601367)	C	L1PA17	LINE/L1	(4)	6162	5800	3565491
12	14.1	3.0	2.9	chr7	4744712	4744744	(154601229)	+	(GCTCCT)n	Simple_repeat	1	34	(0)	3565492
34	0.0	0.0	0.0	chr7	5241268	5241296	(154104677)	+	(CA)n	Simple_repeat	1	29	(0)	3566570
343	28.8	8.1	1.6	chr7	5430460	5430586	(153915387)	C	MIR	SINE/MIR	(87)	175	40	3567007
332	33.9	2.5	5.9	chr7	5525419	5525622	(153820351)	+	L2c	LINE/L2	3191	3387	(0)	3567250
27	22.1	0.0	0.0	chr7	5525625	5525687	(153820286)	+	(ATGA)n	Simple_repeat	1	63	(0)	3567251
208	25.4	7.3	3.1	chr7	5525688	5525752	(153820221)	+	LFSINE_Vert	SINE/tRNA	251	318	(141)	3567252
339	32.7	2.6	0.0	chr7	5525715	5525827	(153820146)	+	L2c	LINE/L2	3272	3387	(0)	3567253
290	25.9	3.2	3.5	chr7	5555734	5555854	(153790119)	+	MIR3	SINE/MIR	63	185	(83)	3567327
185	17.1	6.8	2.4	chr7	11760678	11760719	(147585254)	C	OldhAT1	DNA/hAT-Ac	(1369)	1479	1436	3576575
418	25.8	6.1	5.5	chr7	21476690	21476853	(137869120)	C	MIRc	SINE/MIR	(0)	268	104	3589340
293	25.0	15.1	1.6	chr7	22320369	22320494	(137025479)	C	Charlie22a	DNA/hAT-Charlie	(303)	188	43	3590476
1305	15.7	2.7	0.9	chr7	25841592	25841810	(133504163)	C	MER58A	DNA/hAT-Charlie	(1)	223	1	3596014
55	0.0	0.0	0.0	chr7	26377019	26377065	(132968908)	+	(TG)n	Simple_repeat	1	47	(0)	3596951
21	6.1	2.9	0.0	chr7	26535241	26535274	(132810699)	+	(AAAAC)n	Simple_repeat	1	35	(0)	3597203
16	10.0	0.0	0.0	chr7	27921336	27921357	(131424616)	+	(T)n	Simple_repeat	1	22	(0)	3599241
420	28.2	8.3	3.6	chr7	27937238	27937432	(131408541)	+	MIR	SINE/MIR	9	213	(49)	3599266
18	4.5	0.0	0.0	chr7	28542576	28542598	(130803375)	+	(GT)n	Simple_repeat	1	23	(0)	3600217
563	26.6	4.1	0.0	chr7	28542697	28542835	(130803138)	C	Eulor12	DNA?	(24)	160	16	3600218
16	22.5	3.7	6.0	chr7	28685950	28686030	(130659943)	+	(GAGAGC)n	Simple_repeat	1	84	(0)	3600424
16	5.2	0.0	0.0	chr7	28700960	28700979	(130644994)	+	(A)n	Simple_repeat	1	20	(0)	3600453
20	27.1	0.0	0.0	chr7	28854656	28854705	(130491268)	+	(AC)n	Simple_repeat	1	50	(0)	3600671
784	24.3	2.8	1.9	chr7	28854754	28854967	(130491006)	+	MLT2C1	LTR/ERVL	1	216	(181)	3600672
289	35.0	10.7	5.7	chr7	28856349	28857084	(130488889)	+	L2b	LINE/L2	1978	2754	(665)	3600676
266	32.9	15.5	3.2	chr7	30291033	30291252	(129054721)	C	L2c	LINE/L2	(217)	3170	2919	3602926
21	22.0	0.0	4.7	chr7	31057163	31057226	(128288747)	+	(CTCC)n	Simple_repeat	1	64	(0)	3604085
27	13.8	5.1	4.8	chr7	42237522	42237600	(117108373)	+	(CTC)n	Simple_repeat	1	83	(0)	3620930
257	30.7	9.1	1.7	chr7	43768416	43768584	(115577389)	+	MIRc	SINE/MIR	29	216	(52)	3623151
20	2.5	12.2	0.0	chr7	43768636	43768679	(115577294)	+	(TCTGTTA)n	Simple_repeat	1	49	(0)	3623152
12	21.9	3.9	3.8	chr7	44796964	44797014	(114548959)	+	(GCG)n	Simple_repeat	1	53	(0)	3624883
21674	10.5	1.6	1.3	chr7	46590736	46596528	(112749445)	+	L1P3	LINE/L1	10	5944	(525)	3627423
32	5.3	0.0	0.0	chr7	50450392	50450430	(108895543)	+	(CGTG)n	Simple_repeat	1	39	(0)	3632383
12	18.4	5.4	0.0	chr7	50450432	50450468	(108895505)	+	G-rich	Low_complexity	1	39	(0)	3632384
304	32.5	9.9	0.0	chr7	55048549	55048736	(104297237)	+	MIRb	SINE/MIR	8	223	(45)	3638143
235	34.3	4.3	5.6	chr7	55108758	55108899	(104237074)	+	L3	LINE/CR1	3805	3944	(155)	3638205
251	28.2	0.0	6.0	chr7	55108914	55108996	(104236977)	C	L2a	LINE/L2	(92)	3334	3257	3638206
43	31.3	2.8	5.0	chr7	66920826	66921080	(92424893)	+	(CA)n	Simple_repeat	1	262	(0)	3651108
12	15.8	0.0	3.3	chr7	66921065	66921094	(92424879)	+	(CACG)n	Simple_repeat	1	30	(0)	3651109
755	15.8	12.1	0.7	chr7	69373635	69373787	(89972186)	+	MER5C	DNA/hAT-Charlie	1	173	(140)	3656528
185	17.4	11.5	2.1	chr7	70098346	70098392	(89247581)	C	L3	LINE/CR1	(2343)	1756	1705	3657850
459	18.5	4.0	0.6	chr7	73648321	73649365	(85696608)	+	(CT)n	Simple_repeat	1	1087	(0)	3665149
408	26.3	4.2	0.9	chr7	73716020	73716134	(85629839)	+	MIR3	SINE/MIR	65	183	(25)	3665287
1515	25.4	11.3	3.8	chr7	74682593	74683464	(84662509)	+	L1MEg	LINE/L1	515	1460	(4624)	3667758
36	0.0	0.0	0.0	chr7	75639563	75639593	(83706380)	+	(GT)n	Simple_repeat	1	31	(0)	3670121
33	13.8	0.0	0.0	chr7	85185059	85185115	(74160858)	+	(AGGAGA)n	Simple_repeat	1	57	(0)	3684486
1737	19.9	1.0	1.0	chr7	92764130	92764436	(66581537)	C	AluJb	SINE/Alu	(5)	307	1	3694393
11449	11.9	2.2	0.6	chr7	92925365	92927142	(66418831)	C	L1P3	LINE/L1	(4669)	1801	4	3694580
13	21.7	0.0	2.6	chr7	98878848	98878886	(60467087)	+	(GCGCTCG)n	Simple_repeat	1	39	(0)	3703633
2196	8.9	1.0	2.6	chr7	100240699	100241001	(59104972)	+	AluSx3	SINE/Alu	2	299	(12)	3706127
27	6.1	0.0	0.0	chr7	100478316	100478350	(58867623)	+	(AG)n	Simple_repeat	1	35	(0)	3706675
60	0.0	0.0	0.0	chr7	100478351	100478401	(58867572)	+	(GT)n	Simple_repeat	1	51	(0)	3706676
45	10.8	0.0	0.0	chr7	100889719	100889788	(58456185)	+	(CCTCC)n	Simple_repeat	1	70	(0)	3707582
13	28.1	0.0	7.6	chr7	101085354	101085432	(58260541)	+	G-rich	Low_complexity	1	79	(0)	3707963
20	21.4	2.8	4.1	chr7	101085609	101085679	(58260294)	+	G-rich	Low_complexity	1	73	(0)	3707964
197	32.0	7.2	2.8	chr7	101244545	101244650	(58101323)	+	MIRb	SINE/MIR	155	265	(3)	3708308
2207	12.2	0.0	0.0	chr7	101332624	101332926	(58013047)	C	AluSx1	SINE/Alu	(9)	303	1	3708534
231	33.0	1.1	1.1	chr7	101332929	101333023	(58012950)	+	MIR	SINE/MIR	167	261	(1)	3708532
36	2.7	0.0	0.0	chr7	101743688	101743725	(57602248)	+	(CCT)n	Simple_repeat	1	38	(0)	3709558
12409	10.2	1.4	2.4	chr7	103105958	103108134	(56237839)	+	L1PA7	LINE/L1	16	2171	(4328)	3712223
288	32.3	5.8	0.0	chr7	104945439	104945568	(54400405)	C	MIR3	SINE/MIR	(20)	188	51	3714875
389	12.9	7.0	22.4	chr7	104945683	104945735	(54400238)	+	MIR	SINE/MIR	119	161	(101)	3714876
45	2.3	0.0	0.0	chr7	105014152	105014196	(54331777)	+	(GCC)n	Simple_repeat	1	45	(0)	3715005
24	30.7	0.0	0.0	chr7	105691659	105691719	(53654254)	+	GA-rich	Low_complexity	1	61	(0)	3716386
330	32.6	16.8	0.6	chr7	105753189	105753367	(53592606)	+	MIRc	SINE/MIR	2	215	(53)	3716524
632	29.2	8.8	2.3	chr7	110888674	110888929	(48457044)	+	L2a	LINE/L2	3151	3424	(2)	3723594
381	34.5	7.8	0.7	chr7	110888967	110889127	(48456846)	+	MIRb	SINE/MIR	1	170	(98)	3723595
3531	12.5	1.7	0.4	chr7	110889128	110889649	(48456324)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	3723596
4231	18.6	2.1	3.5	chr7	111070998	111071908	(48274065)	+	L1MB5	LINE/L1	5271	6168	(6)	3723844
267	35.0	11.7	2.6	chr7	112150983	112151141	(47194832)	+	L3b	LINE/CR1	4916	5098	(134)	3725360
480	29.3	5.8	5.5	chr7	112151142	112151399	(47194574)	+	MIRb	SINE/MIR	2	258	(10)	3725361
30	0.0	0.0	0.0	chr7	112205773	112205798	(47140175)	+	(AC)n	Simple_repeat	1	26	(0)	3725450
261	31.2	0.0	3.6	chr7	112263414	112263496	(47082477)	+	MIRb	SINE/MIR	153	232	(36)	3725523
400	23.4	5.0	3.7	chr7	112263770	112263907	(47082066)	C	Charlie24	DNA/hAT-Charlie	(3)	2447	2327	3725524
12	24.4	2.6	0.0	chr7	112450737	112450775	(46895198)	+	(GGC)n	Simple_repeat	1	40	(0)	3725834
17	19.7	2.1	2.0	chr7	114086036	114086083	(45259890)	+	(CAACAA)n	Simple_repeat	1	49	(0)	3727930
46	4.3	0.0	0.0	chr7	114086235	114086282	(45259691)	+	(CA)n	Simple_repeat	1	48	(0)	3727931
194	28.3	0.0	1.9	chr7	116511427	116511480	(42834493)	+	MamTip2	DNA/hAT-Tip100	181	233	(72)	3731145
16	14.4	0.0	0.0	chr7	116511869	116511899	(42834074)	+	(TGAAAC)n	Simple_repeat	1	31	(0)	3731146
4422	12.9	4.4	0.6	chr7	116958635	116959333	(42386640)	C	Tigger1	DNA/TcMar-Tigger	(0)	2418	1692	3731856
607	25.4	9.4	0.6	chr7	117124621	117124794	(42221179)	+	MIR	SINE/MIR	2	192	(70)	3732130
596	26.2	7.1	1.1	chr7	117124859	117125043	(42220930)	C	Tigger12c	DNA/TcMar-Tigger	(495)	239	43	3732131
311	29.0	10.3	8.0	chr7	120842291	120842489	(38503484)	C	L2a	LINE/L2	(2)	3424	3182	3736886
405	27.6	15.5	2.2	chr7	121302755	121302973	(38043000)	+	L2b	LINE/L2	3070	3315	(72)	3737493
189	35.6	0.0	0.0	chr7	121314646	121314690	(38031283)	C	L2b	LINE/L2	(21)	3354	3310	3737509
302	23.7	8.7	12.0	chr7	121395853	121396068	(37949905)	+	L1M4b	LINE/L1	472	679	(6188)	3737604
16	30.9	1.4	1.4	chr7	121396138	121396206	(37949767)	+	(CCGC)n	Simple_repeat	1	70	(0)	3737605
13	8.5	0.0	3.7	chr7	122144145	122144171	(37201802)	+	(CCTCT)n	Simple_repeat	1	27	(0)	3738703
15	0.0	0.0	0.0	chr7	123798390	123798406	(35547567)	+	(AG)n	Simple_repeat	1	17	(0)	3740985
15	0.0	0.0	0.0	chr7	128360988	128361004	(30984969)	+	(CA)n	Simple_repeat	1	17	(0)	3747073
25	3.4	0.0	0.0	chr7	128361074	128361103	(30984870)	+	(CT)n	Simple_repeat	1	30	(0)	3747074
43	0.0	0.0	0.0	chr7	128361104	128361140	(30984833)	+	(CA)n	Simple_repeat	1	37	(0)	3747075
31	31.6	2.4	0.8	chr7	128361162	128361284	(30984689)	+	(CA)n	Simple_repeat	1	126	(0)	3747075
1463	15.4	9.8	4.3	chr7	128523103	128523382	(30822591)	C	AluJr4	SINE/Alu	(15)	297	1	3747443
196	29.7	5.1	2.6	chr7	128523385	128523460	(30822513)	+	L2c	LINE/L2	3279	3356	(31)	3747444
8980	6.2	0.8	12.6	chr7	129215717	129217278	(30128695)	+	SVA_A	Retroposon/SVA	12	1387	(0)	3748736
515	25.5	16.5	1.4	chr7	129217285	129217499	(30128474)	C	MIR	SINE/MIR	(8)	254	1	3748737
256	8.6	0.0	0.0	chr7	129217553	129217587	(30128386)	+	MADE1	DNA/TcMar-Mariner	1	35	(45)	3748738
2297	12.5	0.0	0.3	chr7	129984323	129984634	(29361339)	C	AluSq	SINE/Alu	(2)	311	1	3750267
691	25.9	3.3	1.9	chr7	129984637	129984845	(29361128)	C	L1M5	LINE/L1	(483)	5759	5548	3750268
160	28.1	3.2	4.6	chr7	130152141	130152602	(29193371)	+	A-rich	Low_complexity	70	522	(0)	3750677
235	15.2	7.6	3.2	chr7	130152603	130152803	(29193170)	+	(CA)n	Simple_repeat	800	1152	(96)	3750676
997	17.5	2.1	0.0	chr7	131934341	131934523	(27411450)	+	MER5A	DNA/hAT-Charlie	3	189	(0)	3753700
370	38.3	5.9	2.4	chr7	131934568	131934813	(27411160)	C	L2b	LINE/L2	(0)	3375	3121	3753701
1294	23.1	8.0	3.1	chr7	133345853	133346249	(25999724)	+	LTR82B	LTR/ERVL	1	461	(369)	3755815
208	7.4	0.0	0.0	chr7	134298767	134298793	(25047180)	C	L2b	LINE/L2	(12)	3363	3337	3757238
1788	19.3	4.5	1.6	chr7	135260302	135260685	(24085288)	C	MLT2C1	LTR/ERVL	(0)	397	2	3758655
220	30.2	1.6	0.0	chr7	135260719	135260781	(24085192)	C	MIRc	SINE/MIR	(78)	190	127	3758656
192	39.0	2.3	1.1	chr7	138890734	138890907	(20455066)	+	L2	LINE/L2	2760	2935	(484)	3764502
192	32.3	0.3	0.5	chr7	140654604	140655184	(18690789)	+	(CCA)n	Simple_repeat	1	583	(0)	3767973
256	23.1	10.0	0.0	chr7	141551677	141551784	(17794189)	+	MIR3	SINE/MIR	27	146	(62)	3769473
53	0.0	0.0	0.0	chr7	148846839	148846883	(10499090)	+	(TG)n	Simple_repeat	1	45	(0)	3779463
2445	5.9	0.0	0.3	chr7	149089725	149090014	(10255959)	C	AluSq2	SINE/Alu	(24)	289	1	3780002
887	28.0	14.8	3.0	chr7	149854553	149855044	(9490929)	C	MLT1E2	LTR/ERVL-MaLR	(64)	563	2	3781245
1391	27.6	16.2	1.6	chr7	150305590	150306332	(9039641)	C	Charlie13a	DNA/hAT-Charlie	(641)	873	2	3781846
216	28.8	11.9	0.9	chr7	150379770	150379874	(8966099)	+	L2c	LINE/L2	3264	3381	(6)	3781975
199	26.8	10.1	0.0	chr7	150380185	150380255	(8965718)	+	MIR3	SINE/MIR	130	208	(0)	3781976
180	34.5	1.2	0.0	chr7	150969537	150969620	(8376353)	C	MIR3	SINE/MIR	(121)	87	3	3782720
348	28.2	9.7	3.7	chr7	150969631	150969766	(8376207)	C	L2b	LINE/L2	(0)	3375	3231	3782721
17	17.9	2.6	0.0	chr7	151248580	151248636	(8097337)	+	(CTCT)n	Simple_repeat	1	58	(0)	3783101
197	22.4	6.5	1.7	chr7	151440780	151440838	(7905135)	+	L2b	LINE/L2	3308	3369	(6)	3783435
239	16.1	1.8	8.2	chr7	151441051	151441111	(7904862)	C	MIRc	SINE/MIR	(110)	158	102	3783436
1170	25.2	8.4	4.8	chr7	152076317	152076753	(7269220)	C	LTR16C	LTR/ERVL	(4)	485	32	3784517
266	22.4	12.8	7.2	chr7	152076918	152076945	(7269028)	C	Tigger10	DNA/TcMar-Tigger	(1227)	617	594	3784518
20	24.6	2.8	6.3	chr7	152464192	152464299	(6881674)	+	(GCCGGCC)n	Simple_repeat	1	111	(0)	3785186
219	33.8	3.8	0.0	chr7	155214662	155214738	(4131235)	C	L2c	LINE/L2	(41)	3346	3267	3789360
201	35.3	4.3	0.0	chr7	156842897	156843029	(2502944)	+	L2	LINE/L2	1851	1989	(1430)	3791423
200	36.4	4.4	5.8	chr8	13122022	13122365	(132016271)	+	L2	LINE/L2	2704	3042	(377)	3812177
43	0.0	0.0	0.0	chr8	13132206	13132242	(132006394)	+	(TG)n	Simple_repeat	1	37	(0)	3812189
17	10.0	3.1	0.0	chr8	17923983	17924014	(127214622)	+	(GTTTT)n	Simple_repeat	1	33	(0)	3818943
2203	10.0	0.7	0.0	chr8	19055263	19055552	(126083084)	C	AluSq2	SINE/Alu	(21)	292	1	3820570
21	14.6	0.0	0.0	chr8	19817439	19817476	(125321160)	+	(GCG)n	Simple_repeat	1	38	(0)	3821835
16	9.9	0.0	5.6	chr8	19817790	19817825	(125320811)	+	(CTCCC)n	Simple_repeat	1	36	(0)	3821836
49	17.4	4.1	1.6	chr8	21788807	21788927	(123349709)	+	(TCTC)n	Simple_repeat	1	126	(0)	3825006
894	19.6	7.9	1.1	chr8	22321536	22321724	(122816912)	+	AluJr	SINE/Alu	105	307	(5)	3825986
342	27.8	4.5	3.1	chr8	26078018	26078147	(119060489)	C	MIRb	SINE/MIR	(91)	177	46	3832027
558	14.6	16.1	0.0	chr8	28163804	28163933	(116974703)	C	MER5A1	DNA/hAT-Charlie	(1)	165	11	3835645
79	40.1	0.0	1.6	chr8	28401356	28401720	(116736916)	+	(GT)n	Simple_repeat	1	365	(0)	3836059
17	11.1	0.0	0.0	chr8	28420853	28420881	(116717755)	+	(TCTC)n	Simple_repeat	1	29	(0)	3836109
46	0.0	0.0	0.0	chr8	28420943	28420981	(116717655)	+	(TG)n	Simple_repeat	1	39	(0)	3836110
2097	13.2	2.6	0.0	chr8	28420983	28421286	(116717350)	C	AluSx1	SINE/Alu	(0)	312	1	3836111
2391	8.1	0.0	1.9	chr8	30655807	30656113	(114482523)	C	AluSz	SINE/Alu	(11)	301	1	3840119
205	31.3	12.8	4.1	chr8	30656114	30656283	(114482353)	+	MIRc	SINE/MIR	69	261	(7)	3840118
38836	4.3	0.5	0.8	chr8	30729080	30733679	(114404957)	+	HERVE-int	LTR/ERV1	1	4587	(3226)	3840312
2014	12.1	1.0	2.2	chr8	33473442	33473754	(111664882)	+	AluJo	SINE/Alu	1	309	(3)	3844559
847	7.4	0.0	0.0	chr8	33513474	33513581	(111625055)	+	U13	snRNA	1	108	(0)	3844636
1912	9.7	7.3	0.4	chr8	33513741	33514019	(111624617)	C	AluSc	SINE/Alu	(9)	300	1	3844637
48	0.0	0.0	0.0	chr8	37232992	37233032	(107905604)	+	(TC)n	Simple_repeat	1	41	(0)	3850026
635	25.8	11.7	0.0	chr8	37604435	37604616	(107534020)	+	MIR	SINE/MIR	16	221	(41)	3850614
1325	16.8	0.5	0.5	chr8	37616848	37617068	(107521568)	C	MER58A	DNA/hAT-Charlie	(0)	224	4	3850639
3610	14.7	2.4	0.8	chr8	37617268	37617486	(107521150)	+	L1MA4	LINE/L1	5668	5884	(416)	3850640
531	28.3	0.0	0.0	chr8	41792883	41792995	(103345641)	C	L2b	LINE/L2	(0)	3375	3263	3857596
2272	12.1	0.0	0.0	chr8	42200833	42201129	(102937507)	C	AluSx	SINE/Alu	(15)	297	1	3858327
245	31.4	12.7	3.3	chr8	42201166	42201379	(102937257)	+	MIRb	SINE/MIR	8	244	(24)	3858328
338	34.1	12.4	3.0	chr8	50056514	50056746	(95081890)	+	MIR	SINE/MIR	5	262	(0)	3865186
1688	28.5	27.1	1.5	chr8	52282834	52284808	(92853828)	C	L2	LINE/L2	(485)	2934	268	3867935
485	21.7	16.5	0.0	chr8	52495791	52495947	(92642689)	+	MER5A	DNA/hAT-Charlie	1	188	(1)	3868220
1321	19.6	8.8	0.0	chr8	58660152	58660473	(86478163)	C	MER31A	LTR/ERV1	(128)	357	5	3876892
27	6.0	0.0	0.0	chr8	66118873	66118907	(79019729)	+	(GGAT)n	Simple_repeat	1	35	(0)	3886888
299	25.9	4.0	14.4	chr8	66521727	66521790	(78616846)	+	MIR	SINE/MIR	15	79	(183)	3887532
76	0.0	0.0	0.0	chr8	66521791	66521855	(78616781)	+	(GA)n	Simple_repeat	1	65	(0)	3887533
589	25.1	2.5	4.0	chr8	66521856	66522052	(78616584)	+	MIRc	SINE/MIR	80	261	(7)	3887532
239	34.0	9.9	2.9	chr8	67234175	67234277	(77904359)	C	L2b	LINE/L2	(30)	3345	3235	3888939
24	24.6	0.0	0.0	chr8	68330773	68330826	(76807810)	+	(AC)n	Simple_repeat	1	54	(0)	3890566
2216	12.3	0.0	1.0	chr8	81106038	81106345	(64032291)	C	AluSz	SINE/Alu	(7)	305	1	3908825
13	4.2	0.0	10.0	chr8	85177041	85177070	(59961566)	+	(CCT)n	Simple_repeat	1	30	(0)	3914154
13	0.0	5.0	0.0	chr8	85178567	85178586	(59960050)	+	(AAAC)n	Simple_repeat	1	21	(0)	3914156
649	16.3	11.9	0.0	chr8	98166165	98166305	(46972331)	+	MER5A1	DNA/hAT-Charlie	7	166	(0)	3933264
342	29.2	8.6	2.8	chr8	98166312	98166487	(46972149)	C	MER5A	DNA/hAT-Charlie	(0)	189	3	3933265
624	11.1	1.0	2.0	chr8	99466958	99467058	(45671578)	C	MLT1C	LTR/ERVL-MaLR	(14)	453	354	3935250
402	23.7	8.2	4.9	chr8	99467090	99467231	(45671405)	+	Charlie7a	DNA/hAT-Charlie	4	150	(122)	3935251
218	23.8	0.0	0.0	chr8	100647545	100647586	(44491050)	C	L2b	LINE/L2	(10)	3365	3324	3937166
216	30.6	4.0	4.7	chr8	100647602	100647728	(44490908)	C	MIRc	SINE/MIR	(72)	196	71	3937167
12	11.2	3.2	3.1	chr8	100647738	100647768	(44490868)	+	(CTGCCC)n	Simple_repeat	1	32	(0)	3937168
463	21.3	10.9	1.9	chr8	102528384	102528541	(42610095)	C	MIR	SINE/MIR	(66)	196	23	3940562
108	16.2	2.7	3.7	chr8	102528542	102528802	(42609834)	+	(GTGCTGT)n	Simple_repeat	1	268	(0)	3940563
12	16.3	0.0	10.0	chr8	109540007	109540075	(35598561)	+	(TCCGCCC)n	Simple_repeat	1	62	(0)	3950983
16	15.2	0.0	5.0	chr8	109644662	109644701	(35493935)	+	(CGC)n	Simple_repeat	1	40	(0)	3951138
1297	26.4	5.4	6.3	chr8	111086674	111087254	(34051382)	C	MLT1E1A	LTR/ERVL-MaLR	(2)	678	1	3953047
276	27.4	8.7	0.0	chr8	122994693	122994787	(22143849)	C	L2a	LINE/L2	(3)	3423	3320	3970950
206	29.1	8.6	3.3	chr8	122994793	122994913	(22143723)	+	L2b	LINE/L2	3248	3375	(0)	3970951
311	18.8	5.9	0.0	chr8	123157591	123157654	(21980982)	C	L2b	LINE/L2	(15)	3360	3293	3971277
22	22.0	0.0	0.0	chr8	123157699	123157742	(21980894)	+	(AC)n	Simple_repeat	1	44	(0)	3971278
289	17.7	0.0	3.1	chr8	123537709	123537772	(21600864)	+	MIR	SINE/MIR	201	262	(0)	3972081
522	28.1	7.8	4.7	chr8	124476268	124476502	(20662134)	C	MIRc	SINE/MIR	(6)	262	20	3973785
99	20.1	6.1	3.9	chr8	140457828	140458190	(4680446)	+	GA-rich	Low_complexity	1	385	(0)	4001984
213	23.5	0.0	3.8	chr8	140458276	140458328	(4680308)	+	L2b	LINE/L2	3099	3149	(226)	4001985
825	26.2	7.1	2.1	chr8	144683894	144684135	(454501)	C	MIR	SINE/MIR	(0)	262	8	4007916
426	32.3	6.4	7.1	chr9	1462482	1462764	(136931953)	+	L2b	LINE/L2	3095	3375	(0)	4010801
560	32.8	2.2	0.0	chr9	1462862	1463059	(136931658)	C	MIRc	SINE/MIR	(12)	256	54	4010802
33	26.9	2.5	2.4	chr9	1463089	1463208	(136931509)	+	(TTCC)n	Simple_repeat	1	123	(0)	4010803
12	17.9	5.0	2.4	chr9	12816821	12816860	(125577857)	+	GA-rich	Low_complexity	1	42	(0)	4026765
278	24.5	9.7	8.1	chr9	14153742	14153914	(124240803)	+	MamRep434	DNA/TcMar-Tigger	31	206	(220)	4028589
225	27.6	0.0	1.7	chr9	14326581	14326639	(124068078)	+	AmnSINE1	SINE/5S-Deu-L2	7	64	(511)	4028798
16	0.0	0.0	0.0	chr9	14326699	14326716	(124068001)	+	(A)n	Simple_repeat	1	18	(0)	4028799
71	36.0	1.6	0.3	chr9	14910476	14910788	(123483929)	+	(CA)n	Simple_repeat	1	318	(0)	4029620
829	19.3	7.2	4.2	chr9	15295179	15295367	(123099350)	C	MER58A	DNA/hAT-Charlie	(3)	221	27	4030238
16	15.8	2.2	4.3	chr9	19408910	19408955	(118985762)	+	(AGGCG)n	Simple_repeat	1	47	(0)	4036276
4534	16.8	5.8	0.6	chr9	20513016	20513866	(117880851)	C	MER54A	LTR/ERVL	(0)	901	4	4037983
965	26.0	19.3	3.9	chr9	20640334	20640798	(117753919)	+	MLT1G3	LTR/ERVL-MaLR	40	577	(2)	4038170
355	28.7	2.7	0.0	chr9	22124835	22124942	(116269775)	+	MARNA	DNA/TcMar-Mariner	11	121	(465)	4040160
18	17.6	0.0	0.0	chr9	22125001	22125032	(116269685)	+	(TC)n	Simple_repeat	1	32	(0)	4040161
323	36.8	3.1	0.6	chr9	33474215	33474370	(104920347)	+	L2c	LINE/L2	2572	2731	(688)	4055492
52	0.0	0.0	0.0	chr9	33474427	33474473	(104920244)	+	(TTTA)n	Simple_repeat	1	47	(0)	4055493
1809	13.8	0.0	0.0	chr9	33474481	33474755	(104919962)	C	AluSz	SINE/Alu	(37)	275	1	4055494
16	12.6	6.8	6.3	chr9	33817006	33817064	(104577653)	+	GA-rich	Low_complexity	1	63	(0)	4056030
308	32.1	7.6	2.9	chr9	34073339	34073476	(104321241)	C	MIRc	SINE/MIR	(122)	146	2	4056651
1609	18.0	2.1	2.1	chr9	34073501	34073789	(104320928)	C	AluJr	SINE/Alu	(19)	293	5	4056652
936	20.9	7.7	3.9	chr9	34186485	34186894	(104207823)	C	L1M5	LINE/L1	(702)	5540	5120	4056942
15	17.7	0.0	7.7	chr9	34512783	34512834	(103881883)	+	(CCCTGT)n	Simple_repeat	1	52	(0)	4057558
4737	8.9	0.5	8.2	chr9	34668566	34669285	(103725432)	+	MER4A	LTR/ERV1	1	664	(0)	4057765
1628	10.6	2.1	0.8	chr9	35657504	35657740	(102736977)	+	AluJb	SINE/Alu	1	240	(72)	4059251
318	27.8	12.9	7.8	chr9	37415476	37415666	(100979051)	C	L2a	LINE/L2	(0)	3426	3225	4062622
1729	11.9	0.4	0.0	chr9	37415677	37415928	(100978789)	+	AluSz	SINE/Alu	58	310	(2)	4062623
271	37.4	1.1	0.0	chr9	37594595	37594723	(100799994)	+	MIR3	SINE/MIR	4	133	(97)	4062999
2195	13.6	2.3	0.0	chr9	38362673	38363011	(100031706)	+	Tigger3a	DNA/TcMar-Tigger	2	348	(0)	4064441
12	15.5	0.0	9.3	chr9	70419774	70419816	(67974901)	+	G-rich	Low_complexity	1	43	(0)	4083113
14	12.6	0.0	0.0	chr9	70421062	70421088	(67973629)	+	(TGCCC)n	Simple_repeat	1	27	(0)	4083115
391	25.2	3.8	7.3	chr9	70533540	70533676	(67861041)	+	Charlie4z	DNA/hAT-Charlie	36	167	(0)	4083360
2159	12.8	0.0	0.3	chr9	77004907	77005204	(61389513)	+	AluSq2	SINE/Alu	1	297	(16)	4093538
1502	23.9	13.9	1.2	chr9	77005294	77005724	(61388993)	+	MLT1G1	LTR/ERVL-MaLR	80	574	(5)	4093539
401	24.4	6.4	5.3	chr9	77179212	77179380	(61215337)	C	L1ME1	LINE/L1	(8)	6171	6001	4093906
1173	5.7	5.4	0.0	chr9	77179385	77179525	(61215192)	C	AluSz6	SINE/Alu	(160)	152	4	4093907
587	23.0	7.8	0.3	chr9	77179538	77179685	(61215032)	C	L1ME1	LINE/L1	(470)	5773	5617	4093906
538	35.3	2.5	4.1	chr9	77980027	77980271	(60414446)	+	MIRb	SINE/MIR	2	242	(26)	4095072
14	9.3	0.0	0.0	chr9	83707680	83707702	(54687015)	+	(GGC)n	Simple_repeat	1	23	(0)	4103350
12	23.6	4.4	0.0	chr9	83707852	83707896	(54686821)	+	(GGCGCA)n	Simple_repeat	1	47	(0)	4103351
3555	20.2	3.8	1.9	chr9	85406834	85407083	(52987634)	+	L1MD2	LINE/L1	5494	5737	(622)	4106157
1921	15.7	1.3	0.7	chr9	85407084	85407389	(52987328)	+	AluJb	SINE/Alu	2	309	(3)	4106158
14	18.5	0.0	0.0	chr9	85941188	85941218	(52453499)	+	(GGC)n	Simple_repeat	1	31	(0)	4107037
14	15.3	0.0	0.0	chr9	85941551	85941579	(52453138)	+	G-rich	Low_complexity	1	29	(0)	4107038
408	15.9	3.2	3.4	chr9	86052943	86053907	(52340810)	+	(CACAC)n	Simple_repeat	1	996	(0)	4107217
2079	20.6	7.4	5.1	chr9	86141747	86142299	(52252418)	C	MER34A	LTR/ERV1	(4)	567	1	4107396
231	3.2	0.0	3.1	chr9	87598745	87598776	(50795941)	+	MER103C	DNA/hAT-Charlie	102	132	(165)	4109746
316	35.4	9.7	5.5	chr9	90810860	90811314	(47583403)	+	L1M5	LINE/L1	4829	5304	(842)	4114325
100	26.2	4.8	0.3	chr9	91839307	91839641	(46555076)	+	(TG)n	Simple_repeat	1	351	(0)	4115810
34	7.8	5.7	1.4	chr9	91839679	91839748	(46554969)	+	(GT)n	Simple_repeat	1	74	(0)	4115811
365	22.1	0.0	6.1	chr9	91908437	91908555	(46486162)	C	MIR	SINE/MIR	(5)	257	155	4115900
17	9.2	5.7	0.0	chr9	93134286	93134320	(45260397)	+	(GCCC)n	Simple_repeat	1	37	(0)	4117770
530	31.2	3.8	1.0	chr9	98280620	98280826	(40113891)	+	MIRb	SINE/MIR	37	249	(19)	4126221
992	27.9	5.1	1.2	chr9	98280865	98281187	(40113530)	+	Charlie29a	DNA/hAT-Charlie	202	537	(182)	4126222
21	33.6	1.3	0.0	chr9	99821957	99822034	(38572683)	+	(CA)n	Simple_repeat	1	79	(0)	4129132
271	24.3	0.0	2.8	chr9	100429245	100429316	(37965401)	+	MIRb	SINE/MIR	24	93	(175)	4130125
412	29.8	3.7	7.1	chr9	100429406	100429575	(37965142)	C	L2b	LINE/L2	(3)	3384	3221	4130126
305	24.7	0.0	6.1	chr9	105245877	105245975	(33148742)	C	MER127	DNA/TcMar-Tigger	(21)	343	251	4137225
63	19.1	0.7	2.7	chr9	106863510	106863655	(31531062)	+	GA-rich	Low_complexity	1	147	(0)	4139695
14	13.6	2.9	2.9	chr9	106863655	106863688	(31531029)	+	(GCT)n	Simple_repeat	1	35	(0)	4139696
15	9.3	5.6	2.6	chr9	106863733	106863768	(31530949)	+	GA-rich	Low_complexity	1	38	(0)	4139697
2299	8.8	1.9	1.0	chr9	109115065	109115369	(29279348)	+	AluSq2	SINE/Alu	1	308	(5)	4143819
31	11.6	4.3	2.8	chr9	112486782	112486850	(25907867)	+	(CCCCG)n	Simple_repeat	1	72	(0)	4149957
226	33.1	9.6	2.5	chr9	113650950	113651170	(24743547)	+	MIR	SINE/MIR	16	255	(13)	4152099
12002	10.0	2.9	6.3	chr9	114869814	114871878	(23522839)	+	L1P2	LINE/L1	412	2517	(3982)	4154585
23150	6.4	1.0	0.4	chr9	121127657	121133788	(17260929)	C	L1PA6	LINE/L1	(1)	6153	2	4166382
798	29.7	8.6	5.6	chr9	121234328	121234699	(17160018)	C	ERVL-int	LTR/ERVL	(977)	4780	4402	4166562
779	23.9	0.0	0.0	chr9	121234706	121234860	(17159857)	+	FRAM	SINE/Alu	4	158	(18)	4166566
193	25.4	1.5	5.6	chr9	122912997	122913067	(15481650)	+	L2b	LINE/L2	3303	3370	(5)	4169766
19	4.0	0.0	0.0	chr9	122913184	122913209	(15481508)	+	(TCC)n	Simple_repeat	1	26	(0)	4169767
526	27.9	8.9	1.3	chr9	124010730	124010958	(14383759)	C	MIR	SINE/MIR	(13)	249	2	4171698
191	28.5	9.9	1.0	chr9	124500755	124500956	(13893761)	+	L2	LINE/L2	2760	2981	(438)	4172697
2051	17.8	6.0	0.0	chr9	124702482	124702874	(13691843)	+	MSTB	LTR/ERVL-MaLR	1	418	(8)	4173075
445	38.2	4.4	1.2	chr9	125732810	125733053	(12661664)	C	MLT1O	LTR/ERVL-MaLR	(220)	322	71	4175240
731	28.7	5.0	0.9	chr9	126641269	126641500	(11753217)	C	MIRb	SINE/MIR	(1)	267	26	4176747
334	32.8	16.2	1.0	chr9	126809154	126809356	(11585361)	+	MIRc	SINE/MIR	19	258	(10)	4177106
538	2.7	0.0	19.8	chr9	128340076	128340166	(10054551)	C	tRNA-Arg-AGA	tRNA	(3)	73	1	4180290
205	34.7	1.3	0.0	chr9	128724491	128724565	(9670152)	C	MIRb	SINE/MIR	(101)	167	92	4181166
584	21.4	3.0	0.0	chr9	128724688	128724818	(9669899)	+	MIR	SINE/MIR	57	191	(71)	4181167
229	24.3	13.7	0.0	chr9	129023507	129023613	(9371104)	C	MIRb	SINE/MIR	(30)	238	115	4181896
304	28.6	1.3	0.0	chr9	129023925	129024001	(9370716)	C	MIRb	SINE/MIR	(82)	186	109	4181897
16	22.6	0.0	0.0	chr9	129175064	129175096	(9219621)	+	A-rich	Low_complexity	1	33	(0)	4182242
399	31.0	2.3	0.3	chr9	129339514	129340956	(9053761)	+	(GT)n	Simple_repeat	1	1476	(0)	4182600
29	6.7	2.0	2.0	chr9	129417315	129417363	(8977354)	+	(CATC)n	Simple_repeat	1	50	(0)	4182770
23	28.6	1.1	3.2	chr9	129417377	129417470	(8977247)	+	(CATC)n	Simple_repeat	1	95	(0)	4182770
183	35.3	0.0	0.0	chr9	129417475	129417525	(8977192)	C	L2b	LINE/L2	(3)	3372	3322	4182771
215	33.3	5.3	3.1	chr9	129417608	129417737	(8976980)	+	MIR3	SINE/MIR	16	148	(60)	4182772
230	37.4	1.8	0.0	chr9	129483551	129483657	(8911060)	+	MIRb	SINE/MIR	152	260	(8)	4182936
480	32.1	2.6	5.1	chr9	129679875	129680110	(8714607)	+	MIRb	SINE/MIR	23	252	(16)	4183381
2413	9.7	0.3	0.0	chr9	129680123	129680430	(8714287)	+	AluSx	SINE/Alu	4	312	(0)	4183382
225	27.8	2.2	3.2	chr9	129685651	129685743	(8708974)	C	ORSL-2b	DNA/hAT-Tip100	(386)	122	31	4183395
546	32.0	12.6	2.5	chr9	129685780	129686269	(8708448)	C	L2b	LINE/L2	(0)	3375	2823	4183396
350	28.6	9.8	4.7	chr9	129720360	129720585	(8674132)	C	MIRc	SINE/MIR	(32)	236	3	4183483
256	36.1	5.8	5.8	chr9	130287587	130287777	(8106940)	+	L2b	LINE/L2	3180	3370	(5)	4184726
309	24.9	18.3	1.2	chr9	130431709	130431875	(7962842)	+	MIRb	SINE/MIR	33	234	(34)	4184997
757	14.7	0.0	7.0	chr9	130446014	130446156	(7948561)	C	FLAM_C	SINE/Alu	(10)	133	1	4185024
439	31.0	10.0	6.4	chr9	131349905	131350280	(7044437)	C	L2b	LINE/L2	(1)	3386	2994	4186882
2227	8.0	0.0	1.7	chr9	131376067	131376368	(7018349)	+	AluSx	SINE/Alu	1	297	(15)	4186955
493	32.2	6.5	0.9	chr9	131376369	131376443	(7018274)	+	MIRb	SINE/MIR	185	258	(10)	4186953
682	23.1	3.0	0.0	chr9	131376444	131376603	(7018114)	+	MLT1J2	LTR/ERVL-MaLR	1	165	(283)	4186956
380	26.4	0.0	0.0	chr9	131396063	131396153	(6998564)	+	MIRc	SINE/MIR	114	204	(64)	4187016
2347	10.4	1.0	0.0	chr9	131401654	131401960	(6992757)	C	AluSq2	SINE/Alu	(3)	310	1	4187031
1917	11.6	5.2	0.0	chr9	131401964	131402238	(6992479)	C	AluSz	SINE/Alu	(5)	307	18	4187032
57	11.6	0.0	0.0	chr9	132162524	132162617	(6232100)	+	(GT)n	Simple_repeat	1	94	(0)	4188354
2255	7.0	1.7	4.0	chr9	132429563	132429863	(5964854)	+	AluY	SINE/Alu	1	294	(17)	4188880
624	33.4	4.1	6.6	chr9	132429884	132430338	(5964379)	C	HAL1ME	LINE/L1	(2015)	450	8	4188878
373	28.7	9.1	2.6	chr9	132511395	132511548	(5883169)	+	L2b	LINE/L2	3208	3372	(3)	4189048
463	27.3	8.1	1.3	chr9	132545859	132546109	(5848608)	+	L2b	LINE/L2	3136	3426	(0)	4189117
61	27.5	2.5	4.9	chr9	132799481	132799758	(5594959)	+	(CA)n	Simple_repeat	1	285	(0)	4189526
759	12.0	4.0	7.2	chr9	133031186	133031338	(5363379)	C	LTR10B	LTR/ERV1	(0)	547	400	4189956
51	22.3	0.6	5.0	chr9	133356682	133356841	(5037876)	+	G-rich	Low_complexity	1	161	(0)	4190459
490	28.8	1.7	0.1	chr9	133382445	133383799	(5010918)	+	(GTG)n	Simple_repeat	1	1378	(0)	4190491
280	26.3	0.7	0.1	chr9	133851652	133852349	(4542368)	+	(ATGG)n	Simple_repeat	1	703	(0)	4191165
198	27.9	0.0	0.0	chr9	134434541	134434583	(3960134)	+	L2a	LINE/L2	3381	3423	(3)	4192013
224	36.0	5.7	4.8	chr9	134434665	134434769	(3959948)	+	L2c	LINE/L2	3272	3377	(10)	4192014
1236	15.7	8.3	0.4	chr9	134948614	134948856	(3445861)	+	MER21A	LTR/ERVL	1	264	(667)	4192580
3635	22.3	7.9	4.4	chr9	135891191	135892248	(2502469)	+	L1MEf	LINE/L1	200	1297	(4903)	4193741
29	0.0	0.0	0.0	chr9	135967784	135967808	(2426909)	+	(GT)n	Simple_repeat	1	25	(0)	4193861
76	36.3	0.9	2.1	chr9	135967825	135968156	(2426561)	+	(TG)n	Simple_repeat	1	335	(0)	4193862
727	13.5	6.3	2.7	chr9	136307255	136309004	(2085713)	+	(AC)n	Simple_repeat	1	1861	(0)	4194247
337	29.6	9.4	3.6	chr9	136688991	136689244	(1705473)	+	L2a	LINE/L2	3098	3411	(15)	4194653
236	20.7	13.3	1.3	chr9	136689223	136689330	(1705387)	C	MIR1_Amn	SINE/MIR	(36)	194	69	4194654
5179	13.6	2.4	0.8	chr9	136796533	136797430	(1597287)	+	LTR5B	LTR/ERVK	1	913	(89)	4194817
550	25.5	5.7	0.0	chr9	136820861	136821009	(1573708)	+	L1MC1	LINE/L1	5736	5893	(440)	4194854
367	31.3	2.6	0.7	chr9	136821053	136821200	(1573517)	+	HAL1b	LINE/L1	2254	2404	(17)	4194855
22	24.5	1.6	8.0	chr9	136992378	136992500	(1402217)	+	(CCCGC)n	Simple_repeat	1	125	(0)	4195089
17	7.9	0.0	0.0	chr9	137240447	137240473	(1154244)	+	(CCCCT)n	Simple_repeat	1	27	(0)	4195376
13	18.1	0.0	7.0	chr9	137240474	137240483	(1154234)	+	(GCCCC)n	Simple_repeat	14	43	(0)	4195375
14	20.7	5.1	3.2	chr9	137578814	137578872	(815845)	+	(GGCGG)n	Simple_repeat	1	62	(0)	4195812
250	29.6	9.4	6.5	chr9	137620693	137620739	(773978)	C	MIRb	SINE/MIR	(120)	148	99	4195882
236	31.4	1.4	0.0	chr9	137620744	137620813	(773904)	+	L2a	LINE/L2	3353	3423	(3)	4195884
509	28.8	11.1	4.1	chr9	137620873	137621115	(773602)	C	MIR	SINE/MIR	(0)	262	1	4195885
1226	22.5	1.1	1.1	chrX	2252903	2253169	(153787726)	+	AluJb	SINE/Alu	1	267	(45)	4362489
1282	24.1	5.6	5.4	chrX	12058016	12058475	(143982420)	C	LTR48B	LTR/ERV1	(183)	461	1	4378958
617	21.9	16.8	0.8	chrX	12158399	12158853	(143882042)	C	L1ME3B	LINE/L1	(2)	6171	5620	4379104
2594	19.1	4.5	1.8	chrX	12159651	12160068	(143880827)	C	Tigger9b	DNA/TcMar-Tigger	(1)	623	204	4379106
37	7.0	0.0	0.0	chrX	12160069	12160113	(143880782)	+	(GT)n	Simple_repeat	1	45	(0)	4379107
2594	19.1	4.5	1.8	chrX	12160114	12160295	(143880600)	C	Tigger9b	DNA/TcMar-Tigger	(421)	203	7	4379106
631	26.1	13.2	0.0	chrX	17736605	17736788	(138304107)	C	MIR	SINE/MIR	(28)	234	23	4388318
884	18.6	6.0	2.6	chrX	23793092	23793317	(132247578)	C	L1MC5	LINE/L1	(992)	8312	8079	4398077
17	28.1	1.8	0.0	chrX	23793565	23793620	(132247275)	+	(CAA)n	Simple_repeat	1	57	(0)	4398080
1435	20.9	21.4	4.1	chrX	23844293	23844806	(132196089)	+	MLT1E2	LTR/ERVL-MaLR	1	627	(0)	4398225
820	15.1	0.1	0.0	chrX	23885448	23885573	(132155322)	C	FLAM_C	SINE/Alu	(82)	220	1	4398314
13	10.0	0.0	0.0	chrX	23885711	23885732	(132155163)	+	(TTC)n	Simple_repeat	1	22	(0)	4398315
883	13.2	0.0	0.0	chrX	23989833	23989953	(132050942)	C	AluJr	SINE/Alu	(190)	122	2	4398535
655	12.1	10.6	4.8	chrX	23990030	23990153	(132050742)	+	AluJr	SINE/Alu	1	132	(180)	4398536
2644	3.4	0.3	0.0	chrX	24033504	24033801	(132007094)	+	AluY	SINE/Alu	1	299	(12)	4398642
614	20.1	0.8	1.5	chrX	24033820	24033949	(132006946)	+	FLAM_C	SINE/Alu	6	212	(90)	4398643
643	12.8	9.6	12.4	chrX	24033950	24034035	(132006860)	+	L1MB2	LINE/L1	6016	6101	(70)	4398644
2203	9.8	0.0	2.6	chrX	24164650	24164956	(131875939)	+	AluSq2	SINE/Alu	1	299	(14)	4398982
2165	10.4	0.0	2.9	chrX	39880561	39880868	(116160027)	C	AluSx1	SINE/Alu	(13)	299	1	4421366
345	24.2	5.2	0.0	chrX	39881107	39881197	(116159698)	C	MARNA	DNA/TcMar-Mariner	(58)	528	433	4421367
655	22.9	5.7	5.2	chrX	41104834	41105092	(114935803)	C	Tigger9a	DNA/TcMar-Tigger	(2)	730	350	4423686
993	24.8	10.5	3.6	chrX	41145257	41145645	(114895250)	+	L1ME3B	LINE/L1	5531	5949	(293)	4423748
2794	16.9	10.5	1.9	chrX	44684778	44685349	(111355546)	+	MLT1E2	LTR/ERVL-MaLR	1	627	(0)	4429475
630	34.4	8.9	3.5	chrX	46965627	46966232	(109074663)	C	L2c	LINE/L2	(262)	3125	2483	4433135
15	0.0	0.0	0.0	chrX	47634756	47634772	(108406123)	+	(AC)n	Simple_repeat	1	17	(0)	4434565
430	33.0	8.7	2.7	chrX	48937614	48937797	(107103098)	+	MIRb	SINE/MIR	70	265	(3)	4437125
626	27.4	2.4	1.8	chrX	49172842	49173008	(106867887)	+	MIR	SINE/MIR	60	227	(35)	4437652
13	13.4	6.1	0.0	chrX	49200222	49200254	(106840641)	+	(GGCGC)n	Simple_repeat	1	35	(0)	4437694
25	18.1	3.1	1.5	chrX	53082571	53082634	(102958261)	+	(CCG)n	Simple_repeat	1	66	(0)	4443013
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
16326	10.2	1.1	2.1	chrX	76178830	76183734	(79857161)	C	L1P3	LINE/L1	(1523)	4938	1	4467329
601	27.1	5.8	2.3	chrX	96791752	96791974	(59248921)	C	MIRb	SINE/MIR	(11)	257	14	4489661
13	21.0	2.4	2.4	chrX	103729494	103729534	(52311361)	+	(CTCTT)n	Simple_repeat	1	42	(0)	4499067
939	23.7	2.5	2.5	chrX	107675644	107675885	(48365010)	+	MER102b	DNA/hAT-Charlie	1	242	(99)	4504621
501	24.3	10.3	0.0	chrX	107675896	107675932	(48364963)	C	MER5A1	DNA/hAT-Charlie	(0)	166	114	4504622
1323	16.7	2.8	0.0	chrX	107675933	107676177	(48364718)	+	L1MB7	LINE/L1	5933	6184	(0)	4504623
64	1.7	0.0	0.0	chrX	107742261	107742319	(48298576)	+	(GA)n	Simple_repeat	1	59	(0)	4504742
28	19.5	1.6	0.0	chrX	107742346	107742406	(48298489)	+	G-rich	Low_complexity	1	62	(0)	4504743
603	12.4	2.2	0.0	chrX	110087363	110087451	(45953444)	C	AluJb	SINE/Alu	(12)	300	210	4507900
562	28.4	8.0	7.3	chrX	110428133	110428469	(45612426)	+	L2b	LINE/L2	3039	3424	(2)	4508413
438	29.1	2.5	0.0	chrX	118536704	118536820	(37504075)	+	L2b	LINE/L2	3238	3357	(18)	4519433
17	9.1	5.4	2.6	chrX	118537217	118537253	(37503642)	+	(TGG)n	Simple_repeat	1	39	(0)	4519434
1426	9.6	7.8	3.6	chrX	119872294	119872335	(36168560)	C	AluSx	SINE/Alu	(82)	230	193	4522030
22747	8.9	1.9	0.7	chrX	123648006	123654416	(32386479)	+	L1PA7	LINE/L1	1	6468	(1)	4527053
2333	13.8	20.0	7.5	chrX	123849628	123849896	(32190999)	+	MER4A1_	LTR/ERV1	341	600	(0)	4527507
17	29.3	2.4	2.4	chrX	134549324	134549405	(21491490)	+	(GAGC)n	Simple_repeat	1	84	(0)	4542925
14	18.8	0.0	2.6	chrX	134549560	134549597	(21491298)	+	(CGGAG)n	Simple_repeat	1	38	(0)	4542926
2272	7.1	0.0	4.0	chrX	134569841	134570136	(21470759)	C	AluSx1	SINE/Alu	(27)	285	2	4542964
346	23.8	13.7	1.3	chrX	135003666	135003818	(21037077)	C	L1M5	LINE/L1	(2229)	3917	3743	4543815
1039	27.0	1.5	3.6	chrX	136058493	136058567	(19982328)	C	L1ME1	LINE/L1	(16)	6163	6090	4545294
2365	8.1	0.0	3.4	chrX	136058568	136058889	(19982006)	+	AluSq2	SINE/Alu	1	311	(2)	4545295
1401	20.5	9.2	2.2	chrX	136131052	136131379	(19909516)	+	Tigger7	DNA/TcMar-Tigger	1	329	(10)	4545464
2008	15.9	0.0	0.0	chrX	136131382	136131690	(19909205)	C	LOR1b	LTR/ERV1	(0)	461	153	4545465
535	22.5	7.0	0.0	chrX	136208004	136208123	(19832772)	C	MIRc	SINE/MIR	(27)	241	113	4545587
904	22.4	0.5	2.7	chrX	136208197	136208416	(19832479)	+	MIRb	SINE/MIR	42	256	(12)	4545588
681	23.0	10.7	1.9	chrX	139133010	139133222	(16907673)	+	MER103C	DNA/hAT-Charlie	63	296	(1)	4550250
17	0.0	0.0	0.0	chrX	139133345	139133363	(16907532)	+	(A)n	Simple_repeat	1	19	(0)	4550251
89	33.0	2.0	3.9	chrX	149504517	149505021	(6535874)	+	GA-rich	Low_complexity	1	515	(0)	4564707
878	24.8	7.0	0.4	chrX	150625090	150625316	(5415579)	+	MIR	SINE/MIR	14	256	(6)	4566202
287	21.4	3.5	0.0	chrX	153599826	153599881	(2441014)	+	L2c	LINE/L2	3327	3384	(3)	4570456
270	31.7	0.0	1.9	chrX	153668261	153668363	(2372532)	+	L2c	LINE/L2	3273	3373	(14)	4570566
14	23.4	0.0	2.4	chrX	153971840	153971881	(2069014)	+	(GGC)n	Simple_repeat	1	42	(0)	4570996
749	30.9	13.8	1.4	chrX	154308051	154308619	(1732276)	C	L2a	LINE/L2	(95)	3331	2668	4571675