13	18.8	4.5	2.2	chr1	1116008	1116051	(247840371)	+	(CCCCAGC)n	Simple_repeat	1	46	(0)	1381
17	10.7	0.0	3.1	chr1	6159343	6159438	(242796984)	+	(CAT)n	Simple_repeat	1	93	(0)	7755
929	20.1	1.4	7.4	chr1	6727636	6727866	(242228556)	+	MER20	DNA/hAT-Charlie	1	217	(2)	8768
367	21.9	13.8	4.8	chr1	8506639	8506763	(240449659)	+	MLT1L	LTR/ERVL-MaLR	155	292	(318)	11735
409	26.1	4.4	2.5	chr1	8506793	8506949	(240449473)	C	MER104	DNA/TcMar-Tc2	(16)	165	6	11736
2657	18.7	5.0	7.6	chr1	11281556	11282307	(237674115)	C	L1ME2	LINE/L1	(0)	6164	5433	17368
480	31.7	7.6	0.0	chr1	11456770	11456952	(237499470)	C	MIR	SINE/MIR	(6)	256	59	17739
831	26.8	9.3	1.8	chr1	12149724	12150146	(236806276)	C	MLT1G1	LTR/ERVL-MaLR	(0)	579	72	19266
611	24.7	6.6	4.5	chr1	12472117	12472294	(236484128)	C	HAL1	LINE/L1	(1584)	923	742	19840
455	29.1	13.1	5.7	chr1	12472327	12472698	(236483724)	C	HAL1	LINE/L1	(2082)	425	22	19840
14620	5.1	1.3	0.7	chr1	16103329	16105518	(232850904)	C	HERVK9-int	LTR/ERVK	(0)	6021	3720	26705
264	9.1	0.0	0.0	chr1	16506444	16506476	(232449946)	C	U1	snRNA	(0)	165	133	27657
1606	22.1	11.8	6.0	chr1	16506477	16507011	(232449411)	C	LTR4	LTR/ERV1	(0)	596	27	27658
293	37.7	1.4	0.0	chr1	16621175	16621312	(232335110)	C	MER91B	DNA/hAT-Tip100	(50)	140	1	27834
575	6.3	1.2	0.0	chr1	17150110	17150188	(231806234)	C	MADE1	DNA/TcMar-Mariner	(0)	80	1	28800
658	25.3	10.8	4.7	chr1	17909993	17910144	(231046278)	C	Helitron1Na_Mam	RC/Helitron	(205)	857	681	30498
420	23.4	6.1	3.2	chr1	17955688	17955842	(231000580)	C	MIR3	SINE/MIR	(89)	173	16	30612
494	27.3	4.3	0.0	chr1	18653704	18653835	(230302587)	C	MIRb	SINE/MIR	(116)	152	15	32120
38123	6.3	0.2	0.5	chr1	19542502	19547188	(229409234)	+	HERVK9-int	LTR/ERVK	1349	6021	(0)	33889
3782	8.9	0.8	0.2	chr1	19547189	19547695	(229408727)	+	MER9a3	LTR/ERVK	1	510	(2)	33889
324	36.7	5.4	0.0	chr1	19651065	19651222	(229305200)	C	MIRb	SINE/MIR	(73)	195	29	34132
24634	5.5	1.4	0.2	chr1	20000001	20003214	(228953208)	+	HERVK9-int	LTR/ERVK	2768	6021	(0)	34916
4212	6.7	0.0	0.0	chr1	20003219	20003727	(228952695)	+	MER9a2	LTR/ERVK	5	513	(0)	34916
266	29.5	16.2	1.8	chr1	26419428	26419590	(222536832)	C	MIRc	SINE/MIR	(67)	201	3	49301
207	28.3	1.6	1.6	chr1	26826394	26826454	(222129968)	+	L2a	LINE/L2	3346	3406	(20)	50247
423	34.2	0.7	0.7	chr1	29266565	29266711	(219689711)	+	MIRb	SINE/MIR	80	226	(42)	56281
1346	26.0	7.6	5.7	chr1	29266673	29266846	(219689576)	C	L2a	LINE/L2	(4)	3422	3263	56282
263	24.4	8.4	6.4	chr1	31170752	31170891	(217785531)	C	MIR3	SINE/MIR	(10)	198	56	60028
885	23.2	1.9	4.5	chr1	37060159	37060424	(211895998)	C	MER33	DNA/hAT-Charlie	(22)	302	44	72037
228	32.1	19.9	0.0	chr1	37603442	37603650	(211352772)	+	LTR88a	LTR/Gypsy?	243	503	(313)	73066
328	28.1	7.5	2.6	chr1	37842744	37842933	(211113489)	C	L2-3_Crp	LINE/L2	(1144)	952	753	73552
405	33.1	7.7	2.5	chr1	38938315	38938540	(210017882)	+	L2c	LINE/L2	2842	3079	(340)	75647
180	29.7	16.3	0.8	chr1	43286203	43286321	(205670101)	+	L2c	LINE/L2	3110	3250	(137)	84084
182	30.9	9.0	1.2	chr1	43832943	43833024	(205123398)	C	MIRb	SINE/MIR	(1)	267	179	85009
405	33.6	11.0	8.9	chr1	44870414	44870656	(204085766)	+	L2b	LINE/L2	2088	2313	(1106)	86883
4404	3.9	0.0	1.2	chr1	48513245	48513763	(200442659)	C	MER9a1	LTR/ERVK	(0)	513	1	93433
50171	5.2	0.7	0.1	chr1	48513764	48519743	(200436679)	C	HERVK9-int	LTR/ERVK	(0)	6021	1	93433
328	26.5	1.3	14.0	chr1	48920183	48920353	(200036069)	+	MIR3	SINE/MIR	60	208	(0)	94263
262	29.7	3.8	0.0	chr1	52695655	52695755	(196260667)	C	L2a	LINE/L2	(611)	2808	2704	101481
12	16.9	2.9	2.8	chr1	52843544	52843583	(196112839)	+	(GTCCC)n	Simple_repeat	1	40	(0)	101893
2536	6.8	0.3	0.0	chr1	52843676	52843985	(196112437)	C	AluSx3	SINE/Alu	(0)	311	1	101894
207	29.2	9.1	3.2	chr1	53415024	53415147	(195541275)	C	L2a	LINE/L2	(652)	2767	2636	103053
2123	21.6	14.3	2.5	chr1	54643773	54644368	(194312054)	C	L1MDa	LINE/L1	(4672)	1961	1274	105555
364	31.7	5.3	0.0	chr1	55315993	55316134	(193640288)	+	MIRb	SINE/MIR	26	175	(93)	106855
2326	9.7	0.3	0.0	chr1	55316174	55316471	(193639951)	C	AluSx	SINE/Alu	(13)	299	1	106856
801	30.1	0.9	0.5	chr1	55621620	55621843	(193334579)	+	LTR33C	LTR/ERVL	17	241	(388)	107429
445	28.4	1.7	0.0	chr1	55621852	55621967	(193334455)	+	MLT2E	LTR/ERVL	303	420	(208)	107430
208	25.6	14.0	2.5	chr1	56571115	56571234	(192385188)	+	MIR3	SINE/MIR	23	158	(50)	109104
378	26.5	13.8	4.0	chr1	56571247	56571473	(192384949)	C	MIRb	SINE/MIR	(1)	261	3	109105
291	25.2	5.0	3.4	chr1	58813788	58813906	(190142516)	+	L2c	LINE/L2	3263	3383	(4)	113578
202	30.7	14.8	0.0	chr1	59020749	59020823	(189935599)	+	L2b	LINE/L2	3245	3332	(43)	114016
2179	14.4	8.5	0.8	chr1	79078472	79078862	(169877560)	+	MSTA	LTR/ERVL-MaLR	5	428	(0)	145384
9767	12.2	4.3	0.1	chr1	79923391	79924842	(169031580)	+	THE1C-int	LTR/ERVL-MaLR	1	1515	(65)	146498
1677	16.2	14.9	1.9	chr1	82992698	82993068	(165963354)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	150572
648	33.1	12.3	3.1	chr1	85122986	85123858	(163832564)	+	L2a	LINE/L2	2455	3426	(0)	153650
304	30.1	4.3	3.1	chr1	93710579	93710750	(155245672)	+	L2b	LINE/L2	2935	3101	(274)	166718
1970	21.8	7.2	3.8	chr1	93710753	93711273	(155245149)	C	MLT1F	LTR/ERVL-MaLR	(2)	546	7	166719
412	33.5	12.1	3.1	chr1	94309537	94309829	(154646593)	C	L2	LINE/L2	(1539)	1880	1558	167584
13331	5.4	0.1	0.4	chr1	94448659	94450303	(154506119)	+	HERVK9-int	LTR/ERVK	4381	6021	(0)	167807
3923	3.3	5.5	0.4	chr1	94450304	94450789	(154505633)	+	MER9a3	LTR/ERVK	1	512	(0)	167807
775	27.4	12.8	2.7	chr1	107523120	107523615	(141432807)	+	L2a	LINE/L2	2856	3426	(0)	185557
1019	34.9	6.8	3.4	chr1	107540399	107541396	(141415026)	+	L2b	LINE/L2	2346	3375	(0)	185583
1742	26.1	11.1	2.9	chr1	110138176	110138976	(138817446)	C	L1ME4b	LINE/L1	(13)	879	5	189615
454	23.2	19.9	2.1	chr1	110138995	110139183	(138817239)	C	L2a	LINE/L2	(3)	3423	3193	189616
595	34.0	2.9	5.0	chr1	121483661	121483982	(127472440)	+	ERVL-E-int	LTR/ERVL	2636	2950	(2717)	207122
676	20.6	4.9	0.0	chr1	148334612	148334766	(100621656)	C	U1	snRNA	(1)	164	2	215516
38470	5.1	0.3	0.1	chr1	150654651	150659225	(98297197)	+	HERVK9-int	LTR/ERVK	1436	6020	(1)	219552
3893	5.1	4.9	0.6	chr1	150659227	150659716	(98296706)	+	MER9a3	LTR/ERVK	1	512	(0)	219552
2957	10.1	1.3	6.0	chr1	151907384	151907656	(97048766)	+	LTR76	LTR/ERV1	422	675	(0)	222092
669	17.2	2.0	0.2	chr1	154295734	154295883	(94660539)	+	L1M4a1	LINE/L1	1631	1779	(800)	225844
1610	10.5	0.0	22.4	chr1	154295884	154296085	(94660337)	+	AluSz6	SINE/Alu	1	133	(179)	225857
973	24.9	7.2	1.3	chr1	155160055	155160401	(93796021)	C	L2a	LINE/L2	(160)	3266	2898	227480
71	1.6	0.0	0.0	chr1	161097673	161097737	(87858685)	+	(TC)n	Simple_repeat	1	65	(0)	236861
38	4.3	0.0	2.0	chr1	161097738	161097777	(87858645)	+	(TG)n	Simple_repeat	2	41	(0)	236862
503	10.0	0.0	0.0	chr1	161612718	161612787	(87343635)	+	tRNA-Gly-GGA	tRNA	1	70	(5)	237810
334	27.3	2.4	4.0	chr1	164596114	164596239	(84360183)	+	MamRep1151	LTR?	586	709	(0)	242371
293	26.9	0.9	5.3	chr1	164596316	164596429	(84359993)	+	MER102b	DNA/hAT-Charlie	230	338	(3)	242372
418	12.0	3.9	1.3	chr1	164596442	164596517	(84359905)	+	MER20	DNA/hAT-Charlie	1	78	(141)	242373
2195	14.7	9.1	0.3	chr1	168054154	168054543	(80901879)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	247726
938	25.7	13.9	3.3	chr1	175219431	175219852	(73736570)	+	L2a	LINE/L2	2910	3383	(43)	258396
14	33.3	1.4	1.4	chr1	176207201	176207269	(72749153)	+	(CCG)n	Simple_repeat	1	70	(0)	259874
15	20.5	5.1	0.0	chr1	176207252	176207310	(72749112)	+	(GC)n	Simple_repeat	1	62	(0)	259875
3966	5.3	5.3	0.2	chr1	178554076	178554562	(70401860)	C	MER9a2	LTR/ERVK	(0)	513	1	263261
33775	5.0	1.6	0.3	chr1	178554563	178559396	(70397026)	C	HERVK9-int	LTR/ERVK	(0)	6021	1125	263261
1238	29.2	8.4	1.0	chr1	180893781	180894264	(68062158)	+	ERV3-16A3_I-int	LTR/ERVL	147	669	(4327)	267126
1184	24.9	8.6	2.0	chr1	180894330	180894678	(68061744)	+	ERV3-16A3_I-int	LTR/ERVL	775	1148	(4078)	267126
40	4.9	0.0	0.0	chr1	205709328	205709370	(43247052)	+	(CA)n	Simple_repeat	1	43	(0)	303966
10900	6.3	0.5	0.3	chr1	205894217	205895642	(43060780)	+	HERVK9-int	LTR/ERVK	4594	6021	(0)	304233
4125	6.7	0.4	1.4	chr1	205895643	205896160	(43060262)	+	MER9a2	LTR/ERVK	1	513	(0)	304233
3402	11.9	1.8	3.5	chr1	211641128	211641509	(37314913)	C	L1MA9	LINE/L1	(183)	6129	5743	313111
43986	4.8	2.5	1.2	chr1	213025993	213031102	(35925320)	C	HERVK9-int	LTR/ERVK	(0)	6021	786	315597
23	15.5	2.2	0.0	chr1	220300500	220300544	(28655878)	+	(AGC)n	Simple_repeat	1	46	(0)	326003
413	32.5	10.3	0.5	chr1	223839173	223839364	(25117058)	+	MIRb	SINE/MIR	22	234	(34)	331305
16	25.2	1.7	3.3	chr1	224114132	224114191	(24842231)	+	(GGC)n	Simple_repeat	1	61	(0)	331817
1079	26.4	6.6	4.4	chr1	224535652	224536079	(24420343)	C	LTR33	LTR/ERVL	(39)	476	39	332747
10065	7.3	1.4	0.3	chr1	224983359	224984733	(23971689)	+	L1PB	LINE/L1	3944	5334	(812)	333439
752	22.8	17.8	3.7	chr1	225981604	225981958	(22974464)	+	L1M4a1	LINE/L1	1351	1766	(813)	334953
2107	13.4	0.0	0.7	chr1	225981962	225982259	(22974163)	C	AluSz	SINE/Alu	(15)	297	2	334954
343	18.3	6.6	0.0	chr1	226107430	226107500	(22848922)	C	MER3	DNA/hAT-Charlie	(93)	116	41	335230
1694	25.1	6.6	6.3	chr1	226107501	226108147	(22848275)	+	L2a	LINE/L2	2298	2946	(473)	335221
1041	15.4	0.0	0.0	chr1	226532216	226532364	(22424058)	C	AluJb	SINE/Alu	(19)	293	145	336073
630	16.5	0.0	0.0	chr1	226532462	226532558	(22423864)	C	AluJo	SINE/Alu	(181)	131	35	336074
44	0.0	0.0	0.0	chr1	226711406	226711443	(22244979)	+	(AG)n	Simple_repeat	1	38	(0)	336323
26	3.0	2.9	0.0	chr1	226711444	226711477	(22244945)	+	(TG)n	Simple_repeat	1	35	(0)	336324
77	25.5	1.4	0.5	chr1	227899566	227899776	(21056646)	+	(CTCTCT)n	Simple_repeat	1	214	(0)	338030
5957	16.2	4.2	5.4	chr1	228117455	228118644	(20837778)	C	MER57-int	LTR/ERV1	(2629)	4908	3671	338308
889	17.6	13.8	2.5	chr1	229575449	229575647	(19380775)	C	AluJo	SINE/Alu	(1)	311	87	340537
2863	10.6	9.1	0.0	chr1	229787149	229787590	(19168832)	C	LTR19A	LTR/ERV1	(0)	486	1	340898
2758	26.7	11.1	4.8	chr1	229966417	229968032	(18988390)	+	L1ME1	LINE/L1	75	1803	(4597)	341200
482	27.2	3.4	8.8	chr1	230111948	230112197	(18844225)	C	MLT1O	LTR/ERVL-MaLR	(10)	532	297	341436
758	26.8	15.1	5.0	chr1	230950661	230951206	(18005216)	+	Charlie17	DNA/hAT-Charlie	1083	1693	(1223)	342666
707	25.3	4.8	3.4	chr1	230951221	230951486	(18004936)	+	Charlie17	DNA/hAT-Charlie	1755	2024	(892)	342667
1960	10.6	8.4	2.0	chr1	231057035	231057390	(17899032)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	342842
1693	24.9	7.1	2.0	chr1	231904442	231904990	(17051432)	+	L1MC4	LINE/L1	6482	7060	(822)	344237
2330	18.2	22.2	2.6	chr1	232897340	232897950	(16058472)	+	MER4CL34	LTR/ERV1	1	765	(0)	345605
1533	26.0	7.4	3.2	chr1	233635662	233636668	(15319754)	C	L2a	LINE/L2	(0)	3426	2378	346694
13	21.9	2.3	2.2	chr1	236395330	236395373	(12561049)	+	(TCCCGGC)n	Simple_repeat	1	45	(0)	351538
15	26.9	0.0	2.1	chr1	236395443	236395497	(12560925)	+	GA-rich	Low_complexity	1	53	(0)	351539
3701	21.3	12.9	1.7	chr1	240320726	240321933	(8634489)	+	Charlie1	DNA/hAT-Charlie	1444	2694	(87)	357459
40	2.6	0.0	0.0	chr1	240683012	240683050	(8273372)	+	(GA)n	Simple_repeat	1	39	(0)	358078
2485	11.5	0.0	0.0	chr1	240683105	240683409	(8273013)	C	AluSx3	SINE/Alu	(6)	305	1	358079
1198	21.0	12.8	5.2	chr1	241423790	241424236	(7532186)	+	MER52D	LTR/ERV1	3	488	(1635)	359283
1103	22.8	1.4	0.0	chr1	241988946	241989164	(6967258)	C	MER58A	DNA/hAT-Charlie	(0)	224	3	360278
2277	10.8	0.7	0.0	chr1	244071978	244072273	(4884149)	C	AluSg	SINE/Alu	(12)	298	1	363542
19582	4.2	0.2	0.2	chr1	247027364	247029662	(1926760)	+	HERVK9-int	LTR/ERVK	3723	6021	(0)	368554
4320	5.3	0.2	0.0	chr1	247029663	247030174	(1926248)	+	MER9a1	LTR/ERVK	1	513	(0)	368554
1127	32.5	5.2	2.3	chr10	122860	123344	(133674078)	+	L2	LINE/L2	2174	2673	(746)	371167
2069	16.2	4.7	1.7	chr10	3297079	3297493	(130499929)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	374899
3196	23.0	7.1	5.5	chr10	6637724	6638359	(127159063)	C	MLT1E1A-int	LTR/ERVL-MaLR	(1)	1488	847	379813
311	34.9	5.0	8.2	chr10	12424122	12424661	(121372761)	+	L2c	LINE/L2	2331	2852	(567)	388907
370	35.1	9.9	4.6	chr10	22972507	22972963	(110824459)	C	X6A_LINE	LINE/CR1	(217)	863	380	406068
2618	10.1	5.2	5.0	chr10	28819254	28819405	(104978017)	C	LTR56	LTR/ERV1	(0)	445	309	415808
2298	8.3	2.0	0.3	chr10	28819406	28819695	(104977727)	+	AluSc	SINE/Alu	1	295	(14)	415809
1257	29.9	11.3	1.9	chr10	36679401	36680166	(97117256)	C	L2a	LINE/L2	(217)	3209	2356	428397
35955	17.0	2.0	1.6	chr10	42487021	42494108	(91303314)	+	HERVK9-int	LTR/ERVK	1	7369	(65)	432150
3803	9.5	1.0	0.0	chr10	42494109	42494602	(91302820)	+	MER9B	LTR/ERVK	1	499	(0)	432150
12646	6.7	1.6	0.7	chr10	42500001	42501709	(91295713)	+	HERVK9-int	LTR/ERVK	4297	6021	(0)	432154
4141	6.8	0.0	0.0	chr10	42501710	42502222	(91295200)	+	MER9a1	LTR/ERVK	1	513	(0)	432154
1658	20.1	0.0	2.1	chr10	50261699	50261986	(83535436)	+	AluJr	SINE/Alu	1	282	(30)	443114
57	29.1	0.0	0.7	chr10	52302101	52302246	(81495176)	+	(AT)n	Simple_repeat	1	146	(0)	446090
3921	6.9	1.2	1.7	chr10	53335597	53336112	(80461310)	C	MER9a2	LTR/ERVK	(0)	513	1	447449
18801	5.6	0.2	0.1	chr10	53336113	53338410	(80459012)	C	HERVK9-int	LTR/ERVK	(0)	6021	3723	447449
3897	5.3	4.7	0.2	chr10	53485154	53485643	(80311779)	C	MER9a1	LTR/ERVK	(0)	513	1	447668
3035	5.8	0.0	0.3	chr10	53485644	53486023	(80311399)	C	HERVK9-int	LTR/ERVK	(0)	6021	5643	447668
181	33.7	2.0	3.9	chr10	62081603	62081704	(71715718)	C	L2	LINE/L2	(521)	2898	2799	459507
365	29.0	0.7	4.0	chr10	67928264	67928414	(65869008)	C	HAL1	LINE/L1	(1749)	758	613	468214
467	31.8	6.0	7.0	chr10	67928483	67928640	(65868782)	C	HAL1	LINE/L1	(2109)	398	240	468214
308	33.5	15.1	2.0	chr10	70253366	70253566	(63543856)	+	MIRb	SINE/MIR	3	234	(34)	473040
404	26.1	6.9	0.0	chr10	71860652	71860785	(61936637)	C	Charlie4z	DNA/hAT-Charlie	(19)	148	5	476035
1129	24.5	2.5	0.4	chr10	72049592	72049865	(61747557)	+	MLT1C	LTR/ERVL-MaLR	186	465	(2)	476435
2137	15.6	0.6	1.4	chr10	73982986	73983336	(59814086)	+	Tigger3a	DNA/TcMar-Tigger	1	348	(0)	480314
566	23.0	14.3	10.7	chr10	73983337	73983408	(59814014)	C	L1MEc	LINE/L1	(4815)	1585	1515	480313
39	31.4	1.4	0.0	chr10	74315249	74315389	(59482033)	+	(TATA)n	Simple_repeat	1	143	(0)	480998
398	32.3	0.8	2.2	chr10	77407430	77407565	(56389857)	C	MIRb	SINE/MIR	(9)	259	126	485855
1747	15.0	0.7	5.6	chr10	86506493	86506798	(47290624)	+	AluJr4	SINE/Alu	1	291	(21)	499626
888	26.9	1.9	3.3	chr10	93209741	93210013	(40587409)	C	LTR16E1	LTR/ERVL	(32)	506	238	510655
506	10.0	0.0	0.0	chr10	95330411	95330480	(38466942)	C	HY1	scRNA	(45)	74	5	514108
2362	9.7	0.0	1.3	chr10	95330498	95330806	(38466616)	C	AluSz6	SINE/Alu	(3)	309	5	514109
185	25.6	5.5	11.3	chr10	101060007	101060103	(32737319)	+	Penelope1_Vert	LINE/Penelope	567	657	(430)	524408
12	25.7	2.1	2.0	chr10	101778798	101778845	(32018577)	+	(CTCC)n	Simple_repeat	1	49	(0)	525666
419	37.1	5.4	9.8	chr10	110232281	110232668	(23564754)	+	L2b	LINE/L2	2986	3355	(20)	539148
580	27.6	9.9	9.3	chr10	116373806	116373898	(17423524)	+	L1MEc	LINE/L1	2070	2152	(4248)	548698
2503	20.0	4.5	2.6	chr10	116373899	116374603	(17422819)	+	Tigger7	DNA/TcMar-Tigger	1	702	(3)	548699
14	19.7	7.7	0.0	chr10	117818473	117818524	(15978898)	+	(TCTTCC)n	Simple_repeat	1	56	(0)	551122
11	19.2	0.0	7.1	chr10	117818501	117818542	(15978880)	+	(TTTCTC)n	Simple_repeat	1	42	(0)	551123
2488	17.4	6.0	9.4	chr10	119462672	119463178	(14334244)	C	MER92B	LTR/ERV1	(1)	635	127	553925
2768	7.8	1.9	0.6	chr10	119463179	119463537	(14333885)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	553926
1054	27.1	9.6	1.1	chr10	129490557	129491202	(4306220)	C	L1ME3Cz	LINE/L1	(3840)	3614	2909	568564
1876	28.2	5.7	3.8	chr10	129491240	129492413	(4305009)	C	L1ME3Cz	LINE/L1	(4722)	2828	544	568564
49997	4.6	1.3	0.3	chr10	130291323	130297285	(3500137)	+	HERVK9-int	LTR/ERVK	1	6021	(0)	569357
4094	4.6	3.1	1.6	chr10	130297286	130297789	(3499633)	+	MER9a3	LTR/ERVK	1	512	(0)	569357
343	13.3	11.8	0.0	chr11	207565	207624	(134878998)	C	AluSg4	SINE/Alu	(43)	267	200	573079
296	15.2	16.5	0.0	chr11	207580	207645	(134878977)	+	SVA_F	Retroposon/SVA	344	422	(953)	573080
2520	9.4	7.7	3.7	chr11	1332740	1333148	(133753474)	C	MSTA	LTR/ERVL-MaLR	(1)	427	1	574487
2152	15.7	3.8	1.4	chr11	9322486	9322919	(125763703)	+	LTR56	LTR/ERV1	1	445	(0)	585480
12340	12.2	3.9	1.9	chr11	20202827	20206228	(114880394)	+	MER41-int	LTR/ERV1	1952	5772	(174)	603524
272	10.5	0.0	0.0	chr11	43869012	43869049	(91217573)	C	U2	snRNA	(150)	38	1	639113
681	0.0	0.0	0.0	chr11	59550629	59550701	(75535921)	C	tRNA-Val-GTA	tRNA	(3)	73	1	656945
1479	13.5	2.3	0.0	chr11	62848872	62849079	(72237543)	C	AluSx	SINE/Alu	(99)	213	1	662951
290	29.1	8.0	0.0	chr11	67058998	67059100	(68027522)	C	Kanga1a	DNA/TcMar-Tc2	(638)	116	5	670838
1993	21.9	14.5	7.3	chr11	73124774	73125425	(61961197)	+	L1MEf	LINE/L1	1159	1901	(4299)	681231
1571	21.1	2.0	0.7	chr11	73125426	73125714	(61960908)	+	AluJo	SINE/Alu	4	296	(16)	681233
2461	9.3	6.1	10.3	chr11	73630759	73631140	(61455482)	C	LTR56	LTR/ERV1	(0)	445	85	682287
2365	8.5	0.0	0.7	chr11	76353727	76354020	(58732602)	+	AluSx4	SINE/Alu	1	292	(18)	687842
12	23.5	0.0	0.0	chr11	78417107	78417141	(56669481)	+	(TGACGC)n	Simple_repeat	1	35	(0)	691988
383	27.7	8.6	0.6	chr11	79032321	79032480	(56054142)	C	MIR3	SINE/MIR	(16)	192	19	693121
23	28.2	0.0	0.0	chr11	92886329	92886388	(42200234)	+	(GT)n	Simple_repeat	1	60	(0)	714799
399	32.4	15.6	0.9	chr11	100550722	100550945	(34535677)	C	MIRc	SINE/MIR	(2)	266	4	725151
1472	20.7	11.7	0.6	chr11	110307765	110308099	(24778523)	+	MLT1A1	LTR/ERVL-MaLR	1	377	(31)	739607
249	30.4	0.0	0.6	chr11	110901254	110901355	(24185267)	C	MIRc	SINE/MIR	(67)	163	63	740529
7979	9.1	0.7	1.8	chr11	117397873	117398985	(17687637)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	480	751105
6398	23.3	8.0	3.6	chr11	120380165	120382246	(14704376)	C	L1MC3	LINE/L1	(10)	7775	5595	756470
519	22.6	13.8	2.9	chr11	123228180	123228384	(11858238)	C	MIRc	SINE/MIR	(15)	253	23	761127
13	19.4	0.0	2.7	chr11	125214319	125214355	(9872267)	+	(TTCCTC)n	Simple_repeat	1	37	(0)	764155
467	32.9	16.1	2.7	chr12	202196	202489	(133072820)	+	L2b	LINE/L2	3035	3375	(0)	778379
1446	15.3	33.2	1.9	chr12	5557889	5558191	(127717118)	C	MER61B	LTR/ERV1	(29)	398	1	787195
1523	15.6	4.1	5.0	chr12	7168332	7168505	(126106804)	C	MER66-int	LTR/ERV1	(2616)	4060	3880	790045
5662	16.7	5.2	1.0	chr12	7168489	7169948	(126105361)	+	MER66-int	LTR/ERV1	647	2169	(4507)	790047
1690	16.0	7.2	0.7	chr12	14263213	14263499	(119011810)	C	AluJr	SINE/Alu	(3)	309	3	801054
4516	27.1	10.2	3.2	chr12	25098013	25099713	(108175596)	+	L2	LINE/L2	1073	2907	(512)	815962
1374	33.1	10.4	2.9	chr12	25855156	25856088	(107419221)	C	L3	LINE/CR1	(2313)	1786	776	817103
255	22.6	7.0	2.1	chr12	29723770	29723864	(103551445)	+	Tigger3d	DNA/TcMar-Tigger	86	185	(136)	822767
1577	18.3	10.7	5.9	chr12	30954933	30955374	(102319935)	C	MER110A	LTR/ERV1	(0)	468	3	824454
1647	20.4	5.6	7.6	chr12	31682254	31682804	(101592505)	C	LTR55	LTR/ERVL?	(2)	546	8	825803
377	18.8	9.7	3.5	chr12	31794479	31794594	(101480715)	C	MIR	SINE/MIR	(42)	220	97	826065
1516	26.6	7.2	1.4	chr12	33756284	33756791	(99518518)	C	L1MC4	LINE/L1	(258)	7784	7245	829429
4166	4.5	0.4	3.8	chr12	39188962	39189492	(94085817)	C	MER9a1	LTR/ERVK	(0)	513	1	832093
15588	5.8	4.5	0.1	chr12	39189493	39191695	(94083614)	C	HERVK9-int	LTR/ERVK	(0)	6021	3723	832093
10173	13.5	4.8	3.4	chr12	44029613	44030647	(89244662)	+	MER41-int	LTR/ERV1	1420	2975	(2040)	838927
2015	12.0	4.8	0.6	chr12	46563367	46563709	(86711600)	C	L1MA5A	LINE/L1	(5)	7711	7354	842445
17	14.6	6.4	0.0	chr12	46563710	46563733	(86711576)	+	(TATT)n	Simple_repeat	1	25	(0)	842446
4419	6.8	0.2	0.0	chr12	47443339	47443849	(85831460)	C	MER9a2	LTR/ERVK	(1)	512	1	843719
17901	5.4	0.6	0.1	chr12	47443850	47446136	(85829173)	C	HERVK9-int	LTR/ERVK	(0)	6021	3723	843719
396	37.0	4.0	1.6	chr12	50084770	50085011	(83190298)	+	MIRc	SINE/MIR	18	265	(3)	848383
14	24.9	0.0	0.0	chr12	50085032	50085070	(83190239)	+	G-rich	Low_complexity	1	39	(0)	848384
1136	22.5	7.9	4.2	chr12	50247163	50247599	(83027710)	+	MLT1G1	LTR/ERVL-MaLR	10	513	(66)	848753
4490	3.6	2.3	0.0	chr12	50491884	50492384	(82782925)	C	MER9a1	LTR/ERVK	(0)	513	1	849361
4434	11.9	5.5	2.6	chr12	50768487	50769222	(82506087)	+	MER41-int	LTR/ERV1	2667	3425	(2521)	849958
12	20.7	4.7	2.2	chr12	53964393	53964435	(79310874)	+	G-rich	Low_complexity	1	45	(0)	855716
656	26.4	6.7	2.6	chr12	54169199	54169470	(79105839)	C	L2b	LINE/L2	(611)	2808	2525	855973
16655	16.2	2.4	3.4	chr12	56833052	56834575	(76440734)	C	MER50-int	LTR/ERV1	(2239)	4966	3458	860347
266	30.1	7.9	5.1	chr12	57378123	57378217	(75897092)	+	MIRb	SINE/MIR	165	268	(0)	861161
335	20.6	5.8	15.6	chr12	63396118	63396290	(69879019)	C	PrimLTR79	LTR/ERV1	(0)	503	349	869358
624	29.2	4.7	4.7	chr12	71589238	71589449	(61685860)	+	MIRb	SINE/MIR	44	255	(13)	882531
334	26.3	14.5	0.0	chr12	71589473	71589590	(61685719)	C	MIRc	SINE/MIR	(83)	185	48	882532
200	30.2	0.0	0.0	chr12	71757989	71758031	(61517278)	C	L3	LINE/CR1	(136)	3963	3921	882818
14	20.4	3.7	3.6	chr12	92146392	92146445	(41128864)	+	(GTGCG)n	Simple_repeat	1	56	(0)	911016
300	33.3	5.8	7.4	chr12	93154626	93154923	(40120386)	+	L2	LINE/L2	2659	2951	(468)	912834
187	27.6	9.4	3.3	chr12	93678261	93678320	(39596989)	+	MamSINE1	SINE/tRNA-RTE	111	174	(116)	913952
4281	5.8	0.0	0.0	chr12	102661271	102661783	(30613526)	C	MER9a1	LTR/ERVK	(0)	513	1	929389
42011	6.2	2.8	0.7	chr12	102661784	102666844	(30608465)	C	HERVK9-int	LTR/ERVK	(0)	6021	790	929389
441	33.1	5.4	0.8	chr12	103523726	103523940	(29751369)	C	MIRb	SINE/MIR	(21)	247	20	930794
4189	5.7	0.6	0.2	chr12	105302834	105303344	(27971965)	C	MER9a1	LTR/ERVK	(0)	513	1	934142
4449	16.7	3.3	2.0	chr12	108662806	108663862	(24611447)	+	L1MB7	LINE/L1	5119	6184	(0)	940761
529	28.1	4.6	3.1	chr12	111134673	111134863	(22140446)	C	L2b	LINE/L2	(132)	3243	3050	946360
262	29.3	2.9	2.9	chr12	111134960	111135061	(22140248)	C	L2b	LINE/L2	(540)	2879	2778	946360
351	25.8	3.5	1.3	chr12	111432347	111432481	(21842828)	C	L1ME4c	LINE/L1	(385)	5739	5619	947095
3977	15.5	1.8	6.1	chr12	111432501	111433069	(21842240)	C	L1MB7	LINE/L1	(13)	6171	5592	947096
339	35.7	2.1	1.1	chr12	115163584	115163770	(18111539)	+	MIR3	SINE/MIR	18	206	(2)	955423
13	18.8	0.0	5.0	chr12	117968993	117969032	(15306277)	+	G-rich	Low_complexity	1	40	(0)	961513
1579	26.7	7.3	5.2	chr12	117971294	117971909	(15303400)	C	L1MEg	LINE/L1	(5329)	2004	1375	961522
1499	22.1	0.3	3.1	chr12	117971895	117972212	(15303097)	C	L1MEg	LINE/L1	(5879)	356	48	961522
1024	22.0	0.8	4.0	chr12	121143873	121144123	(12131186)	C	L1MB7	LINE/L1	(11)	6173	5931	968678
1753	19.4	4.7	8.3	chr12	124938490	124938971	(8336338)	+	LTR10E	LTR/ERV1	1	464	(169)	977197
587	8.3	0.0	0.0	chr12	124939966	124940037	(8335272)	+	tRNA-Ala-GCG	tRNA	1	72	(3)	977201
11511	4.6	2.5	0.9	chr13	19629295	19630711	(94733617)	+	HERVK9-int	LTR/ERVK	4582	6021	(0)	992728
4406	4.3	0.0	1.2	chr13	19630712	19631230	(94733098)	+	MER9a2	LTR/ERVK	1	513	(0)	992728
10627	12.1	4.3	2.6	chr13	23682993	23686052	(90678276)	+	PABL_A-int	LTR/ERV1	1420	5944	(2)	999175
14	10.0	6.2	0.0	chr13	37000762	37000793	(77363535)	+	(GCGCAG)n	Simple_repeat	1	34	(0)	1019397
1908	20.7	3.6	3.0	chr13	40463857	40464320	(73900008)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	1024151
339	28.1	7.8	4.8	chr13	40613460	40613646	(73750682)	+	Eulor9A	DNA	42	234	(67)	1024382
3841	13.3	2.2	13.5	chr13	41148180	41148942	(73215386)	+	LTR76	LTR/ERV1	1	675	(0)	1025343
1137	17.6	0.0	5.8	chr13	41148943	41149024	(73215304)	+	AluJo	SINE/Alu	214	294	(18)	1025342
3491	12.3	2.8	1.0	chr13	44140261	44140779	(70223549)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	1029838
183	32.7	5.3	5.3	chr13	45236107	45236219	(69128109)	+	MamTip2	DNA/hAT-Tip100	40	152	(153)	1031849
340	29.3	9.1	0.6	chr13	45236228	45236409	(69127919)	+	CR1_Mam	LINE/CR1	1318	1516	(688)	1031850
497	26.4	3.7	11.1	chr13	45833606	45833815	(68530513)	C	MIRc	SINE/MIR	(32)	236	36	1032925
1428	26.9	9.9	1.2	chr13	72567174	72567587	(41796741)	C	LFSINE_Vert	SINE/tRNA	(2)	457	4	1068969
35931	6.4	0.6	0.5	chr13	84873737	84876707	(29487621)	+	HERVK14C-int	LTR/ERVK	4378	7434	(0)	1085796
803	21.7	1.1	4.5	chr13	84876708	84876736	(29487592)	C	MER4-int	LTR/ERV1	(2885)	5235	5214	1085798
4719	5.3	0.7	0.2	chr13	84876737	84877320	(29487008)	+	LTR14C	LTR/ERVK	1	587	(0)	1085799
185	27.1	3.3	0.0	chr13	86901043	86901101	(27463227)	C	L3	LINE/CR1	(2012)	2087	2027	1088287
287	34.7	14.6	5.6	chr13	95535141	95536122	(18828206)	C	L2c	LINE/L2	(484)	2935	1850	1100301
6134	17.6	4.9	1.9	chr13	96967578	96968808	(17395520)	+	HUERS-P3-int	LTR/ERV1	743	2011	(6908)	1102313
2028	10.9	5.8	5.3	chr13	98787210	98787588	(15576740)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1105234
2629	21.0	4.4	1.6	chr13	110802525	110803159	(3561169)	C	L1MC4a	LINE/L1	(1)	7881	7228	1121776
20398	9.0	2.9	2.4	chr14	21005507	21006081	(86037637)	+	PABL_A-int	LTR/ERV1	1863	2438	(2577)	1128947
299	36.0	8.8	4.0	chr14	26697504	26697827	(80345891)	C	L2	LINE/L2	(1414)	2005	1665	1137123
3788	8.4	0.4	3.6	chr14	42307103	42307631	(64736087)	C	MER9a3	LTR/ERVK	(0)	512	1	1159158
28396	12.4	2.6	2.3	chr14	42307632	42309752	(64733966)	C	HERVK9-int	LTR/ERVK	(2089)	6027	3856	1159158
32419	5.6	0.8	0.1	chr14	52168473	52172109	(54871609)	+	HERVK9-int	LTR/ERVK	2357	6021	(0)	1172536
3165	9.4	4.2	0.0	chr14	52172122	52172577	(54871141)	+	MER9a3	LTR/ERVK	37	512	(0)	1172538
1938	17.5	8.8	4.6	chr14	54438729	54439141	(52604577)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	1175929
14	4.3	4.2	0.0	chr14	56118335	56118358	(50925360)	+	(CTCC)n	Simple_repeat	1	25	(0)	1178822
3029	11.8	0.2	0.0	chr14	65570743	65571173	(41472545)	+	MER57A1	LTR/ERV1	1	432	(0)	1193387
289	29.8	15.8	2.8	chr14	68195233	68195446	(38848272)	+	L2c	LINE/L2	2526	2772	(647)	1197359
386	23.1	21.2	1.8	chr14	69314228	69314390	(37729328)	C	MIRb	SINE/MIR	(32)	236	34	1199290
190	22.9	0.0	15.7	chr14	70046722	70046804	(36996914)	C	L2b	LINE/L2	(3)	3372	3303	1200594
6765	15.4	9.1	1.2	chr14	70397514	70398810	(36644908)	C	MER52D	LTR/ERV1	(243)	1880	471	1201134
272	25.7	7.1	1.9	chr14	90399672	90399778	(16643940)	+	AmnSINE1	SINE/5S-Deu-L2	117	229	(346)	1233839
959	24.3	12.0	2.5	chr14	92214313	92214591	(14829127)	+	LTR16C	LTR/ERVL	179	487	(2)	1237114
226	23.7	5.0	0.0	chr14	96146500	96146575	(10897143)	C	MamGypsy2-LTR	LTR/Gypsy	(71)	112	33	1244326
294	28.3	2.9	6.6	chr14	98919657	98919762	(8123956)	C	MIRc	SINE/MIR	(47)	221	120	1249192
607	19.2	7.6	0.7	chr14	100199646	100199792	(6843926)	C	MER5A	DNA/hAT-Charlie	(31)	158	1	1251404
1573	14.7	0.0	2.5	chr14	102624542	102624786	(4418932)	+	AluJb	SINE/Alu	59	297	(15)	1255351
419	27.3	8.1	10.0	chr14	102624791	102624879	(4418839)	C	L1MEg	LINE/L1	(5828)	414	325	1255346
1462	17.6	4.8	4.8	chr14	102624880	102625174	(4418544)	C	AluJr	SINE/Alu	(17)	295	1	1255352
13	24.0	4.8	0.0	chr14	102775020	102775061	(4268657)	+	GA-rich	Low_complexity	1	44	(0)	1255664
11149	6.6	0.0	0.3	chr14	103237523	103238967	(3804751)	+	HERVK9-int	LTR/ERVK	4582	6021	(0)	1256407
4329	5.1	0.2	1.2	chr14	103238968	103239485	(3804233)	+	MER9a2	LTR/ERVK	1	513	(0)	1256407
323	37.0	6.8	3.3	chr14	104035292	104035590	(3008128)	C	L4_A_Mam	LINE/RTE-X	(105)	4885	4576	1258002
8601	20.6	6.1	1.4	chr15	26484071	26486210	(75504979)	+	L1MC3	LINE/L1	5317	7563	(222)	1271534
2249	11.8	1.2	1.2	chr15	34323316	34323650	(67667539)	+	MER1B	DNA/hAT-Charlie	5	339	(0)	1282685
1448	21.7	12.2	1.4	chr15	34323651	34323670	(67667519)	+	L1M5	LINE/L1	5473	5492	(952)	1282684
525	11.5	0.0	0.0	chr15	35726713	35726790	(66264399)	C	MADE2	DNA/TcMar-Mariner	(2)	78	1	1284750
2302	12.0	0.0	1.0	chr15	44189491	44189791	(57801398)	C	AluSz	SINE/Alu	(14)	298	1	1298347
4820	6.7	0.2	0.0	chr15	45234478	45235063	(56756126)	C	LTR14C	LTR/ERVK	(0)	587	1	1300294
63138	4.2	0.4	0.2	chr15	45235064	45242440	(56748749)	C	HERVK14C-int	LTR/ERVK	(0)	7434	47	1300294
220	27.4	8.4	3.9	chr15	48653230	48653411	(53337778)	C	L2c	LINE/L2	(175)	3212	3022	1305121
1424	25.1	8.9	6.4	chr15	51088776	51089214	(50901975)	+	LTR16A	LTR/ERVL	1	451	(0)	1309028
584	7.1	0.0	27.3	chr15	62211971	62212124	(39779065)	C	LTR14A	LTR/ERVK	(232)	112	1	1326530
1010	29.1	1.2	0.9	chr15	62212137	62212458	(39778731)	C	HERVK14-int	LTR/ERVK	(25)	7409	7087	1326530
588	34.6	6.3	2.1	chr15	66841913	66842248	(35148941)	+	L2b	LINE/L2	3024	3374	(1)	1335563
819	28.4	5.1	3.2	chr15	66923185	66923530	(35067659)	C	MLT1L	LTR/ERVL-MaLR	(224)	386	34	1335715
378	35.1	6.0	2.4	chr15	66923572	66923860	(35067329)	C	L2b	LINE/L2	(118)	3257	2958	1335716
269	30.8	10.4	6.2	chr15	67578025	67578235	(34412954)	C	MIRc	SINE/MIR	(32)	236	16	1336846
3820	26.4	9.9	4.3	chr15	67683790	67685777	(34305412)	+	L1MEc	LINE/L1	34	2145	(4255)	1336995
280	35.4	2.2	8.1	chr15	69308375	69308417	(32682772)	C	L2b	LINE/L2	(179)	3208	3169	1339973
1218	16.1	0.9	2.2	chr15	69308418	69308639	(32682550)	C	MER20	DNA/hAT-Charlie	(0)	219	1	1339974
4360	19.0	5.2	2.2	chr15	69775203	69775966	(32215223)	C	L1M4c	LINE/L1	(2936)	3446	2653	1340878
5841	23.2	12.7	5.1	chr15	71834796	71835997	(30155192)	+	L1ME3B	LINE/L1	3866	5080	(1239)	1344433
1635	23.1	8.2	4.3	chr15	71835977	71837043	(30154146)	+	L1ME3B	LINE/L1	5248	6412	(3)	1344433
347	26.2	0.0	0.0	chr15	74262729	74262812	(27728377)	C	Tigger15a	DNA/TcMar-Tigger	(2)	713	630	1348547
194	34.9	7.0	1.9	chr15	74262896	74263003	(27728186)	C	MIRb	SINE/MIR	(62)	206	93	1348548
8782	19.1	5.7	5.9	chr15	75143931	75146047	(26845142)	C	MER52D	LTR/ERV1	(0)	2123	10	1350274
4574	18.2	4.1	0.3	chr15	76610319	76611324	(25379865)	+	L1M3	LINE/L1	4009	5054	(1086)	1352821
5261	19.8	7.4	5.0	chr15	79877719	79878217	(22112972)	+	L1M4a1	LINE/L1	1599	2135	(444)	1358519
4223	9.9	3.1	4.0	chr15	79878218	79878898	(22112291)	C	LTR76	LTR/ERV1	(0)	675	1	1358526
14	25.4	3.1	3.0	chr15	88546596	88546659	(13444530)	+	(GCCCCT)n	Simple_repeat	1	66	(0)	1372570
553	9.8	1.2	0.0	chr15	98476565	98476646	(3514543)	+	MLT1A1	LTR/ERVL-MaLR	326	408	(0)	1388693
1718	24.6	16.4	12.5	chr15	98476647	98476967	(3514222)	+	L1M4a1	LINE/L1	1552	1916	(663)	1388692
209	27.3	0.0	0.0	chr16	1094165	1094219	(89244126)	+	MIRc	SINE/MIR	99	153	(115)	1395495
4146	7.2	0.6	0.0	chr16	3076839	3077348	(87260997)	C	MER9a2	LTR/ERVK	(0)	513	1	1398454
10213	6.0	0.8	0.6	chr16	3077353	3078786	(87259559)	C	HERVK9-int	LTR/ERVK	(3)	6018	4582	1398454
2512	18.6	5.7	1.2	chr16	3149106	3149611	(87188734)	C	LTR53B	LTR/ERVL	(0)	533	4	1398594
629	4.1	0.0	0.0	chr16	3152900	3152972	(87185373)	+	tRNA-Arg-AGG	tRNA	1	73	(3)	1398603
15	5.6	0.0	0.0	chr16	3153378	3153396	(87184949)	+	(A)n	Simple_repeat	1	19	(0)	1398605
214	32.9	1.6	0.0	chr16	3646503	3646593	(86691752)	C	L2a	LINE/L2	(220)	3167	3074	1399560
3175	7.3	6.6	0.0	chr16	10417952	10418417	(79919928)	C	MER9a3	LTR/ERVK	(13)	499	1	1413457
6515	4.6	0.5	0.2	chr16	10418418	10419244	(79919101)	C	HERVK9-int	LTR/ERVK	(0)	6021	5193	1413457
502	27.4	9.5	3.6	chr16	11207334	11207513	(79130832)	+	L2c	LINE/L2	3082	3282	(105)	1415108
224	27.1	6.1	3.6	chr16	11345958	11346068	(78992277)	+	MER5A	DNA/hAT-Charlie	37	150	(39)	1415476
368	32.0	8.5	5.6	chr16	14336445	14336726	(76001619)	+	L2	LINE/L2	2557	2839	(580)	1421889
4967	4.8	0.3	0.0	chr16	19393582	19394166	(70944179)	C	LTR14C	LTR/ERVK	(0)	587	1	1433467
62572	4.7	0.6	0.1	chr16	19394167	19401565	(70936780)	C	HERVK14C-int	LTR/ERVK	(0)	7434	1	1433467
13	19.9	2.9	0.0	chr16	27235670	27235704	(63102641)	+	(CATCC)n	Simple_repeat	1	36	(0)	1450666
295	30.2	12.1	3.6	chr16	30053643	30053838	(60284507)	C	L2b	LINE/L2	(213)	3162	2948	1457167
4375	6.7	0.0	0.2	chr16	31542351	31542892	(58795453)	+	HERVK9-int	LTR/ERVK	5481	6021	(0)	1460535
3856	7.9	1.2	0.4	chr16	31542893	31543400	(58794945)	+	MER9a3	LTR/ERVK	1	512	(0)	1460535
791	25.2	2.2	0.9	chr16	51434933	51435156	(38903189)	C	MIR	SINE/MIR	(11)	251	25	1474358
2502	10.9	5.3	1.4	chr16	51730165	51730583	(38607762)	C	LTR56	LTR/ERV1	(0)	445	10	1474872
13	26.9	0.0	0.0	chr16	54821999	54822038	(35516307)	+	(AAC)n	Simple_repeat	1	40	(0)	1480218
214	30.4	8.9	1.1	chr16	62171823	62171915	(28166430)	+	MIRc	SINE/MIR	118	218	(50)	1492998
14	14.8	2.4	4.8	chr16	68193904	68193944	(22144401)	+	G-rich	Low_complexity	1	42	(0)	1503119
213	30.2	2.9	6.3	chr16	68194066	68194193	(22144152)	C	MIRc	SINE/MIR	(45)	163	42	1503120
1672	23.4	6.7	4.8	chr16	73770000	73770483	(16567862)	+	MLT1D	LTR/ERVL-MaLR	3	496	(9)	1513500
4074	6.5	0.8	1.9	chr16	74912580	74913097	(15425248)	C	MER9a3	LTR/ERVK	(0)	512	1	1515696
995	4.3	0.0	0.8	chr16	74913098	74913215	(15425130)	C	HERVK9-int	LTR/ERVK	(0)	6021	5905	1515696
907	28.1	7.9	5.6	chr16	84141106	84141289	(6197056)	C	L1ME3D	LINE/L1	(213)	5960	5772	1532210
1057	25.4	11.5	1.4	chr16	84141392	84141943	(6196402)	C	L1ME3D	LINE/L1	(457)	5785	5170	1532210
1239	25.1	3.1	2.8	chr17	437942	438330	(82819111)	C	Charlie2a	DNA/hAT-Charlie	(959)	1902	1513	1545230
260	30.0	9.1	0.0	chr17	1550167	1550246	(81707195)	C	L2b	LINE/L2	(63)	3312	3225	1547347
1578	20.7	3.6	5.7	chr17	6118836	6119204	(77138237)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	14	1556433
707	2.4	0.0	0.0	chr17	8120314	8120395	(75137046)	C	tRNA-Leu-CTY	tRNA	(3)	82	1	1560130
2279	11.5	0.0	0.3	chr17	8325514	8325825	(74931616)	+	AluSq2	SINE/Alu	1	311	(2)	1560562
1803	16.2	3.0	8.4	chr17	8325826	8326183	(74931258)	C	LTR56	LTR/ERV1	(44)	401	61	1560561
5559	12.4	1.6	4.9	chr17	9566808	9567311	(73690130)	+	L1PA13	LINE/L1	5692	6161	(2)	1562952
17	28.0	2.3	4.5	chr17	10605468	10605553	(72651888)	+	GA-rich	Low_complexity	1	88	(0)	1564943
192	32.1	12.5	1.8	chr17	10770630	10770743	(72486698)	C	L2	LINE/L2	(3287)	132	5	1565247
430	29.3	13.7	6.9	chr17	10770800	10771136	(72486305)	+	L2a	LINE/L2	3025	3426	(0)	1565248
5424	25.1	5.5	4.8	chr17	12100048	12103024	(71154417)	C	L1ME1	LINE/L1	(2)	6177	3177	1567547
279	29.7	6.8	10.6	chr17	12812055	12812385	(70445056)	C	L2b	LINE/L2	(6)	3381	3070	1568701
279	34.2	4.2	6.5	chr17	14755798	14755896	(68501545)	+	L2c	LINE/L2	2977	3078	(309)	1571977
197	19.7	1.5	14.3	chr17	17052455	17052531	(66204910)	C	MIRc	SINE/MIR	(114)	154	88	1576032
1530	18.1	8.4	1.7	chr17	21526409	21526763	(61730678)	+	MLT1B	LTR/ERVL-MaLR	10	390	(0)	1584401
291	28.1	0.0	0.0	chr17	21526764	21526827	(61730614)	C	LTR53-int	LTR/ERVL	(2161)	1168	1105	1584400
1941	19.6	12.7	0.5	chr17	21526842	21527271	(61730170)	C	LTR53-int	LTR/ERVL	(2182)	1147	658	1584400
4243	17.1	2.7	4.1	chr17	27694961	27695819	(55561622)	C	MER11A	LTR/ERVK	(0)	1071	225	1587250
2404	23.6	2.0	2.1	chr17	27701234	27702152	(55555289)	+	HERVK9-int	LTR/ERVK	5682	7337	(97)	1587251
2796	15.0	5.4	0.0	chr17	27702160	27702611	(55554830)	+	MER9a3	LTR/ERVK	33	510	(2)	1587251
12	20.8	0.0	2.9	chr17	29620712	29620746	(53636695)	+	(CCCTT)n	Simple_repeat	1	35	(0)	1591017
3668	7.5	3.5	0.2	chr17	29985397	29985891	(53271550)	C	MER9a3	LTR/ERVK	(0)	512	1	1591730
33126	6.2	0.5	0.6	chr17	29985892	29986637	(53270804)	C	HERVK9-int	LTR/ERVK	(0)	6021	5290	1591730
1576	23.2	0.3	0.0	chr17	30145856	30146148	(53111293)	C	AluJr	SINE/Alu	(18)	294	1	1592032
25035	6.4	3.0	0.1	chr17	31634266	31638526	(51618915)	+	HERVK9-int	LTR/ERVK	1637	6021	(0)	1594984
3926	5.9	3.7	0.0	chr17	31638527	31639019	(51618422)	+	MER9a3	LTR/ERVK	1	512	(0)	1594984
4295	20.2	10.7	2.7	chr17	32670470	32671405	(50586036)	+	LTR28	LTR/ERV1	1	1020	(0)	1597218
712	28.4	11.8	3.5	chr17	34562224	34562595	(48694846)	C	MLT1I	LTR/ERVL-MaLR	(4)	407	1	1600651
537	27.7	7.8	1.7	chr17	34562718	34562956	(48694485)	+	MIRb	SINE/MIR	6	268	(0)	1600652
377	32.7	11.5	5.8	chr17	42360661	42361004	(40896437)	+	L3	LINE/CR1	3438	3803	(296)	1615453
361	21.4	2.6	1.3	chr17	43982448	43982527	(39274914)	C	Zaphod2	DNA/hAT-Tip100	(3451)	73	1	1618993
679	28.7	8.2	2.9	chr17	45225738	45225945	(38031496)	+	MIR	SINE/MIR	28	247	(15)	1621641
2265	18.3	1.1	1.9	chr17	47554660	47555067	(35702374)	C	Tigger7	DNA/TcMar-Tigger	(260)	445	5	1626268
1119	16.4	0.0	0.0	chr17	50286170	50286334	(32971107)	C	AluJo	SINE/Alu	(11)	301	137	1631467
390	27.2	4.7	3.6	chr17	50286339	50286506	(32970935)	C	MLT1C	LTR/ERVL-MaLR	(287)	218	49	1631464
259	36.0	23.1	3.0	chr17	57280037	57280554	(25976887)	C	L2b	LINE/L2	(210)	3165	2540	1643010
597	30.8	10.1	4.1	chr17	60077024	60077413	(23180028)	C	L2c	LINE/L2	(25)	3362	2947	1648529
270	30.9	16.7	0.0	chr17	60077448	60077667	(23179774)	C	L1ME3G	LINE/L1	(70)	854	591	1648530
317	22.1	3.4	1.1	chr17	63276775	63276861	(19980580)	C	MIR	SINE/MIR	(0)	262	174	1654518
23	28.4	4.4	1.7	chr17	63842676	63842810	(19414631)	+	G-rich	Low_complexity	1	138	(0)	1655440
2011	12.8	6.0	1.1	chr17	68648650	68649011	(14608430)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1664576
664	0.0	0.0	0.0	chr17	82494721	82494792	(762649)	C	tRNA-Met-i	tRNA	(3)	72	1	1687730
602	27.9	12.0	7.8	chr18	5675856	5676174	(74697111)	C	LTR103_Mam	LTR/ERV1?	(45)	430	97	1697553
270	11.1	0.0	0.0	chr18	5676173	5676208	(74697077)	C	tRNA-Asp-GAY	tRNA	(39)	36	1	1697554
2981	22.1	2.1	3.0	chr18	5676209	5676917	(74696368)	+	L1MA9	LINE/L1	5585	6287	(25)	1697555
2062	14.4	12.2	0.8	chr18	6594060	6594436	(73778849)	C	MSTA	LTR/ERVL-MaLR	(2)	426	1	1698767
3851	6.8	3.9	0.0	chr18	10219927	10220415	(70152870)	C	MER9a3	LTR/ERVK	(0)	512	4	1704275
28516	6.4	0.0	0.2	chr18	10220419	10224810	(70148475)	C	HERVK9-int	LTR/ERVK	(0)	6021	1637	1704275
692	28.0	2.1	2.9	chr18	27697429	27697667	(52675618)	C	MER103C	DNA/hAT-Charlie	(54)	243	7	1722763
3932	13.6	1.7	0.6	chr18	29711753	29712389	(50660896)	C	LTR9B	LTR/ERV1	(0)	644	1	1725392
350	28.3	17.3	3.4	chr18	31633612	31633849	(48739436)	+	L2a	LINE/L2	2930	3207	(219)	1727976
429	30.8	6.7	7.6	chr18	31633982	31634206	(48739079)	C	HAL1	LINE/L1	(1753)	754	532	1727974
209	37.3	11.5	1.2	chr18	35500096	35500258	(44873027)	+	L2c	LINE/L2	2973	3154	(233)	1733407
6117	12.6	3.0	1.0	chr18	49447550	49449852	(30923433)	+	HUERS-P3b-int	LTR/ERV1	273	2507	(4911)	1753551
976	28.8	14.8	3.8	chr18	57773613	57774315	(22598970)	+	L2a	LINE/L2	2434	3277	(149)	1766148
2223	10.5	0.0	0.3	chr18	62578774	62579067	(17794218)	C	AluSz	SINE/Alu	(19)	293	1	1773657
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
11534	13.3	2.9	2.2	chr18	80021997	80023821	(349464)	C	LTR25-int	LTR/ERV1	(4813)	2375	539	1796043
1153	8.6	3.8	0.0	chr19	1929574	1929725	(56687891)	+	AluSq2	SINE/Alu	155	312	(1)	1799777
258	30.7	11.1	3.4	chr19	2463141	2463406	(56154210)	C	L1M3e	LINE/L1	(5636)	1394	1106	1800847
3966	21.7	4.9	3.3	chr19	9459995	9462119	(49155497)	+	HERVK9-int	LTR/ERVK	5193	7337	(97)	1817462
2895	13.8	6.5	0.0	chr19	9462120	9462598	(49155018)	+	MER9a3	LTR/ERVK	1	512	(0)	1817462
4303	6.0	0.0	0.0	chr19	9711509	9712021	(48905595)	C	MER9a1	LTR/ERVK	(0)	513	1	1817972
40634	5.7	0.1	0.1	chr19	9712022	9716915	(48900701)	C	HERVK9-int	LTR/ERVK	(0)	6021	1126	1817972
342	33.4	5.1	6.0	chr19	11240356	11240579	(47377037)	+	MIR	SINE/MIR	30	248	(14)	1821794
2759	12.0	1.4	2.8	chr19	11621351	11621778	(46995838)	C	LTR3A	LTR/ERVK	(62)	422	1	1822816
700	10.6	0.0	0.0	chr19	11621779	11621872	(46995744)	C	HERVK3-int	LTR/ERVK	(0)	7202	7109	1822816
4363	13.5	0.9	0.1	chr19	11621892	11622560	(46995056)	C	HERVK3-int	LTR/ERVK	(1885)	5317	4644	1822816
281	17.6	1.9	0.0	chr19	11693858	11693908	(46923708)	+	THE1D	LTR/ERVL-MaLR	1	52	(329)	1822952
1503	14.5	6.8	7.3	chr19	11693948	11694290	(46923326)	+	THE1D	LTR/ERVL-MaLR	41	381	(0)	1822952
23875	5.5	1.2	0.1	chr19	12024462	12027348	(46590268)	+	HERVK9-int	LTR/ERVK	3104	6021	(0)	1823597
3297	8.8	4.8	0.4	chr19	12027357	12027814	(46589802)	+	MER9a3	LTR/ERVK	34	512	(0)	1823598
4324	5.5	0.0	0.6	chr19	12098326	12098841	(46518775)	C	MER9a1	LTR/ERVK	(0)	513	1	1823779
15966	5.4	6.5	0.1	chr19	12098842	12101000	(46516616)	C	HERVK9-int	LTR/ERVK	(0)	6021	3723	1823779
449	15.3	0.0	1.2	chr19	12885149	12885234	(45732382)	+	MER96	DNA/hAT-Tip100	3	87	(88)	1825449
291	27.7	4.7	2.9	chr19	15998448	15998551	(42619065)	+	L2b	LINE/L2	3096	3201	(174)	1832919
3945	7.8	2.3	1.8	chr19	23572700	23573086	(35044530)	C	MER9a2	LTR/ERVK	(117)	396	1	1846873
11324	5.2	2.6	0.4	chr19	23573087	23574482	(35043134)	C	HERVK9-int	LTR/ERVK	(0)	6021	4594	1846873
4435	12.2	2.2	0.8	chr19	23886921	23887580	(34730036)	+	HERVK22-int	LTR/ERVK	6168	6837	(0)	1847314
2911	15.1	2.4	0.0	chr19	23887581	23888024	(34729592)	+	LTR22A	LTR/ERVK	1	455	(3)	1847314
3492	17.2	1.1	2.0	chr19	27750253	27750986	(30866630)	+	HERVKC4-int	LTR/ERVK	2859	3528	(1734)	1847875
2286	16.5	11.4	0.2	chr19	27750987	27751453	(30866163)	+	LTR22B1	LTR/ERVK	1	526	(0)	1847875
2159	14.2	10.6	1.3	chr19	29458158	29458542	(29159074)	+	MSTA	LTR/ERVL-MaLR	3	427	(1)	1850271
320	24.6	3.2	12.9	chr19	30427074	30427213	(28190403)	+	MIR3	SINE/MIR	71	196	(12)	1851842
687	1.3	0.0	0.0	chr19	33177057	33177131	(25440485)	+	tRNA-Thr-ACY	tRNA	1	75	(2)	1856355
1580	13.7	23.9	0.8	chr19	34837285	34837637	(23779979)	C	LTR46	LTR/ERV1	(0)	460	1	1859209
800	9.7	0.0	23.7	chr19	35947304	35947510	(22670106)	+	AluJr	SINE/Alu	140	297	(15)	1861521
49	0.0	0.0	0.0	chr19	35947598	35947639	(22669977)	+	(GT)n	Simple_repeat	1	42	(0)	1861522
1868	8.6	7.9	0.0	chr19	35947640	35947894	(22669722)	C	AluSc8	SINE/Alu	(34)	277	1	1861523
757	33.1	10.8	4.5	chr19	36070670	36070925	(22546691)	C	Kanga11a	DNA/TcMar-Tc2	(439)	531	244	1861806
690	27.6	14.6	1.1	chr19	36488420	36488852	(22128764)	+	L1ME3D	LINE/L1	5490	5990	(252)	1862646
15	27.1	2.2	6.5	chr19	36489006	36489096	(22128520)	+	(CAGTCA)n	Simple_repeat	1	93	(0)	1862647
19	21.8	0.0	2.2	chr19	36916623	36916667	(21700949)	+	(TG)n	Simple_repeat	1	45	(0)	1863509
13	15.9	0.0	9.8	chr19	38110111	38110161	(20507455)	+	G-rich	Low_complexity	1	51	(0)	1865869
2131	18.1	7.0	8.4	chr19	38147365	38147748	(20469868)	C	L1MD2	LINE/L1	(994)	5152	4791	1865954
596	27.4	1.8	0.0	chr19	38147749	38147912	(20469704)	C	MIR	SINE/MIR	(65)	197	31	1865959
1303	20.7	9.5	7.9	chr19	38236777	38237117	(20380499)	C	MLT1D	LTR/ERVL-MaLR	(52)	453	129	1866182
1627	17.0	6.2	1.1	chr19	38237118	38237273	(20380343)	C	AluJo	SINE/Alu	(20)	292	120	1866183
411	31.0	4.6	2.6	chr19	39140726	39140917	(19476699)	+	MIR	SINE/MIR	28	223	(39)	1868367
267	37.0	10.3	0.8	chr19	39150369	39150605	(19467011)	+	L2a	LINE/L2	2557	2818	(601)	1868398
641	29.2	14.8	3.5	chr19	39164302	39164641	(19452975)	C	L2a	LINE/L2	(158)	3268	2881	1868428
603	20.2	1.6	0.0	chr19	39557809	39557932	(19059684)	C	HERVL-int	LTR/ERVL	(2055)	3599	3474	1869349
552	18.9	15.4	0.0	chr19	40465100	40465231	(18152385)	+	MIR	SINE/MIR	12	167	(95)	1871150
246	28.5	3.1	13.4	chr19	40521759	40521830	(18095786)	C	MIR3	SINE/MIR	(0)	208	151	1871306
850	14.4	0.0	0.0	chr19	40521831	40521948	(18095668)	C	AluJo	SINE/Alu	(194)	118	1	1871307
246	28.5	3.1	13.4	chr19	40521949	40522017	(18095599)	C	MIR3	SINE/MIR	(58)	150	82	1871306
7224	10.4	1.8	0.2	chr19	40822624	40823609	(17794007)	+	LTR5B	LTR/ERVK	1	1002	(0)	1872027
731	17.4	1.6	0.0	chr19	41955487	41955607	(16662009)	+	AluJo	SINE/Alu	1	123	(189)	1874248
769	28.0	13.8	0.3	chr19	41955615	41955918	(16661698)	+	L2a	LINE/L2	2852	3202	(224)	1874249
678	28.4	4.9	7.2	chr19	43474766	43474891	(15142725)	C	L2b	LINE/L2	(299)	3076	2971	1876862
473	19.9	1.0	3.6	chr19	43634770	43635084	(14982532)	+	MSR1	Satellite	1	306	(0)	1877291
13	3.5	9.7	2.9	chr19	45607530	45607560	(13010056)	+	GA-rich	Low_complexity	1	34	(0)	1881762
510	18.5	7.8	1.9	chr19	45649665	45649772	(12967844)	+	AluJr	SINE/Alu	9	123	(189)	1881891
1362	11.8	0.0	0.0	chr19	45649778	45649955	(12967661)	C	AluSq2	SINE/Alu	(4)	309	132	1881892
2609	11.4	2.3	0.5	chr19	46168374	46168804	(12448812)	+	LTR56	LTR/ERV1	7	445	(0)	1883045
3107	20.5	6.9	4.7	chr19	46359095	46359777	(12257839)	C	LTR49-int	LTR/ERV1	(632)	5699	4353	1883476
1048	15.0	8.4	1.9	chr19	47327273	47327483	(11290133)	C	L1MB5	LINE/L1	(6)	6168	5943	1885881
808	13.8	0.0	4.3	chr19	47327500	47327637	(11289979)	+	FLAM_C	SINE/Alu	1	132	(11)	1885882
1006	25.6	2.1	0.0	chr19	52273962	52274176	(6343440)	+	Tigger7	DNA/TcMar-Tigger	1	220	(2271)	1897155
393	21.9	1.0	2.0	chr19	52274177	52274274	(6343342)	C	MER2	DNA/TcMar-Tigger	(1)	344	248	1897156
31543	14.0	4.2	2.1	chr19	57564659	57567399	(1050217)	C	LTR25-int	LTR/ERV1	(3703)	3485	633	1907989
32544	20.9	1.9	1.6	chr2	6838364	6846789	(235346740)	C	HUERS-P3-int	LTR/ERV1	(224)	8695	262	1919104
1777	17.1	1.5	0.6	chr2	15775812	15776140	(226417389)	+	MLT1A0	LTR/ERVL-MaLR	34	365	(0)	1933290
11362	5.9	0.2	1.0	chr2	19926547	19927997	(222265532)	+	HERVK9-int	LTR/ERVK	4583	6021	(0)	1939466
4232	4.7	0.2	0.4	chr2	19927998	19928511	(222265018)	+	MER9a2	LTR/ERVK	1	513	(0)	1939466
1971	23.8	6.4	5.4	chr2	22056231	22056861	(220136668)	C	LTR48B	LTR/ERV1	(4)	640	3	1942553
263	36.9	13.2	3.5	chr2	22056862	22057474	(220136055)	C	L2a	LINE/L2	(723)	2696	2018	1942549
919	13.3	0.0	1.5	chr2	32835406	32835540	(209357989)	C	FLAM_C	SINE/Alu	(10)	133	1	1961043
1176	15.1	0.0	0.6	chr2	32835541	32835712	(209357817)	+	MSTB1	LTR/ERVL-MaLR	262	432	(0)	1961042
3988	6.3	1.2	1.6	chr2	33914037	33914550	(208278979)	C	MER9a3	LTR/ERVK	(0)	512	1	1962756
10597	7.8	0.1	0.4	chr2	33914551	33915995	(208277534)	C	HERVK9-int	LTR/ERVK	(0)	6021	4582	1962756
8076	6.0	0.8	0.2	chr2	56722684	56723703	(185469826)	+	HERVK9-int	LTR/ERVK	4991	6016	(5)	1997748
4183	5.5	0.6	0.0	chr2	56723709	56724218	(185469311)	+	MER9a1	LTR/ERVK	1	513	(0)	1997749
1832	17.2	1.3	2.3	chr2	61970906	61971115	(180222414)	C	AluJb	SINE/Alu	(6)	306	99	2005586
6545	10.5	1.8	3.9	chr2	62478946	62479603	(179713926)	C	L1MA5A	LINE/L1	(10)	6287	5635	2006583
184	23.5	6.8	2.9	chr2	68219057	68219126	(173974403)	+	L2	LINE/L2	2820	2892	(527)	2015257
730	25.0	7.2	12.5	chr2	70855587	70855864	(171337665)	C	L1MC4	LINE/L1	(301)	7741	7477	2019719
460	31.4	14.0	3.5	chr2	84888560	84889155	(157304374)	C	L2b	LINE/L2	(130)	3245	2577	2039587
809	29.4	7.8	2.6	chr2	86282921	86283298	(155910231)	+	L2c	LINE/L2	2981	3387	(0)	2042370
13186	16.4	7.2	7.8	chr2	98049562	98051231	(144142298)	+	MER41-int	LTR/ERV1	2667	4378	(1568)	2054473
3706	7.5	6.1	0.0	chr2	99270681	99271160	(142922369)	C	MER9a3	LTR/ERVK	(0)	512	2	2056180
6644	7.4	0.0	0.2	chr2	99271162	99271992	(142921537)	C	HERVK9-int	LTR/ERVK	(0)	6021	5193	2056180
1218	26.5	9.7	6.7	chr2	110975603	110976236	(131217293)	+	HAL1ME	LINE/L1	863	1584	(881)	2072958
2437	19.1	4.3	4.1	chr2	114032627	114033183	(128160346)	+	MER74A	LTR/ERVL	1	558	(0)	2077794
11387	5.9	0.5	0.6	chr2	116254189	116255631	(125937898)	+	HERVK9-int	LTR/ERVK	4581	6021	(0)	2080856
3931	7.1	1.2	0.2	chr2	116255632	116256139	(125937390)	+	MER9a2	LTR/ERVK	1	513	(0)	2080856
218	27.8	4.9	4.9	chr2	128662377	128662478	(113531051)	+	MIRb	SINE/MIR	66	167	(101)	2099542
184	14.3	2.8	2.8	chr2	128662530	128662565	(113530964)	C	L2	LINE/L2	(3383)	36	1	2099543
379	18.0	5.2	7.2	chr2	143232175	143232312	(98961217)	C	Charlie18a	DNA/hAT-Charlie	(80)	262	128	2119818
27569	5.4	3.3	0.1	chr2	152274142	152277893	(89915636)	C	HERVK9-int	LTR/ERVK	(0)	6021	2149	2132168
2446	17.0	3.2	3.2	chr2	152457641	152458143	(89735386)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	3	2132464
22479	17.4	8.0	3.1	chr2	160087151	160089260	(82104269)	C	HUERS-P3-int	LTR/ERV1	(6484)	2435	1	2142604
1949	14.2	0.7	0.7	chr2	171133320	171133601	(71059928)	+	AluSx1	SINE/Alu	4	285	(27)	2157846
14	12.6	0.0	7.5	chr2	179264814	179264853	(62928676)	+	G-rich	Low_complexity	1	40	(0)	2169920
227	25.7	12.8	1.8	chr2	179264958	179265068	(62928461)	+	MIRc	SINE/MIR	2	126	(142)	2169921
21936	14.3	3.3	1.7	chr2	181968015	181972166	(60221363)	C	L1MA3	LINE/L1	(3313)	4246	8	2173357
4028	6.5	1.0	0.2	chr2	183050272	183050779	(59142750)	C	MER9a3	LTR/ERVK	(0)	512	1	2174843
8814	7.0	0.5	0.1	chr2	183050780	183051893	(59141636)	C	HERVK9-int	LTR/ERVK	(0)	6021	4904	2174843
708	32.3	10.9	5.7	chr2	187077697	187078739	(55114790)	C	LTR78	LTR/ERV1	(0)	1304	200	2179939
13	18.2	7.7	1.8	chr2	189569501	189569552	(52623977)	+	(CTCCTTTT)n	Simple_repeat	1	56	(0)	2183028
318	29.1	11.1	10.7	chr2	189785512	189785781	(52407748)	C	L2c	LINE/L2	(22)	3365	3095	2183367
768	21.2	12.5	8.4	chr2	202822467	202822571	(39370958)	+	MER5C	DNA/hAT-Charlie	212	313	(0)	2202750
654	29.5	5.3	7.6	chr2	206230450	206230819	(35962710)	+	LTR88c	LTR/Gypsy?	4	364	(498)	2208273
201	36.3	3.6	2.9	chr2	209980619	209980757	(32212772)	C	L2c	LINE/L2	(3)	3384	3245	2213748
11605	6.3	0.1	1.0	chr2	218115041	218116493	(24077036)	+	HERVK9-int	LTR/ERVK	4583	6021	(0)	2225482
4189	5.7	1.0	1.2	chr2	218116494	218117006	(24076523)	+	MER9a3	LTR/ERVK	1	512	(0)	2225482
696	22.9	10.1	3.8	chr2	218811789	218812028	(23381501)	C	MIR	SINE/MIR	(1)	261	5	2226860
342	18.2	2.5	0.4	chr2	221832733	221832833	(20360696)	C	X7A_LINE	LINE/CR1	(20)	230	127	2231712
561	27.3	15.4	3.3	chr2	226668236	226668673	(15524856)	C	L2a	LINE/L2	(61)	3365	2868	2239283
4362	11.5	1.9	4.3	chr2	239917169	239917860	(2275669)	+	LTR76	LTR/ERV1	1	675	(0)	2259470
383	31.3	13.7	5.5	chr20	893592	893919	(63550248)	+	L2	LINE/L2	2349	2707	(712)	2263975
11871	5.3	0.6	0.3	chr20	5306743	5308179	(59135988)	+	HERVK9-int	LTR/ERVK	4582	6021	(0)	2272353
4226	4.1	0.8	4.5	chr20	5308180	5308712	(59135455)	+	MER9a2	LTR/ERVK	1	513	(0)	2272353
2291	12.2	4.7	6.2	chr20	10070491	10070925	(54373242)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2279930
191	34.6	0.9	6.3	chr20	10070926	10071006	(54373161)	+	MIRb	SINE/MIR	190	265	(3)	2279929
415	24.7	6.8	3.3	chr20	18413240	18413452	(46030715)	+	MER91B	DNA/hAT-Tip100	2	196	(3328)	2292625
221	30.3	0.0	0.0	chr20	19832002	19832067	(44612100)	C	MIR	SINE/MIR	(21)	241	176	2294704
748	26.4	10.9	3.1	chr20	19832071	19832429	(44611738)	+	LTR16B2	LTR/ERVL	1	387	(75)	2294705
442	22.1	6.6	0.0	chr20	23051695	23051807	(41392360)	C	MER45A	DNA/hAT-Tip100	(0)	178	58	2299172
773	26.9	4.2	5.0	chr20	32547590	32547620	(31896547)	C	MIR	SINE/MIR	(232)	30	1	2308641
303	32.8	10.9	1.2	chr20	32624635	32624881	(31819286)	+	L2b	LINE/L2	2701	2974	(445)	2308854
521	20.7	3.9	20.5	chr20	33401624	33401937	(31042230)	+	MER33	DNA/hAT-Charlie	14	267	(57)	2310618
1008	27.7	6.1	3.8	chr20	33947611	33947978	(30496189)	C	MamGypLTR3a	LTR/Gypsy	(4)	977	601	2311980
247	33.3	6.4	2.9	chr20	37827925	37828060	(26616107)	+	L2c	LINE/L2	3011	3151	(236)	2320854
234	33.8	13.5	4.0	chr20	38336129	38336624	(26107543)	+	L2	LINE/L2	2070	2619	(800)	2321944
17843	5.6	0.5	0.0	chr20	39724341	39726629	(24717538)	+	HERVK9-int	LTR/ERVK	3723	6021	(0)	2324639
364	26.1	3.2	0.0	chr20	44073914	44074005	(20370162)	+	Tigger15a	DNA/TcMar-Tigger	365	459	(256)	2332583
2602	21.8	1.1	0.2	chr20	49284129	49284587	(15159580)	C	HERVIP10B3-int	LTR/ERV1	(4621)	3116	2654	2344011
2143	18.2	6.6	13.1	chr20	49700600	49700926	(14743241)	C	MER44B	DNA/TcMar-Tigger	(209)	341	3	2345072
235	31.1	4.3	0.0	chr20	50520758	50520854	(13923313)	+	MIRc	SINE/MIR	9	106	(156)	2347149
482	28.4	6.6	0.0	chr20	51426535	51426675	(13017492)	C	MIR	SINE/MIR	(56)	206	56	2349105
364	27.5	12.9	0.6	chr20	51426677	51426859	(13017308)	+	L1ME3A	LINE/L1	5888	6096	(77)	2349106
213	13.2	0.0	0.0	chr20	62376776	62376813	(2067354)	+	L2b	LINE/L2	3130	3167	(259)	2368477
397	32.3	5.6	1.3	chr20	62722594	62722831	(1721336)	C	L1MEc	LINE/L1	(6087)	313	65	2368876
232	29.8	6.9	2.4	chr21	32117020	32117143	(14592840)	C	L3	LINE/CR1	(51)	4048	3919	2402692
1768	22.5	5.6	9.0	chr21	36076757	36076890	(10633093)	+	L1M5	LINE/L1	3345	3478	(2668)	2409093
1115	26.0	17.9	6.9	chr21	36589537	36590202	(10119781)	+	MER20B	DNA/hAT-Charlie	1	755	(28)	2410152
183	34.6	13.4	3.3	chr21	37506889	37508111	(9201872)	+	L2b	LINE/L2	1251	2616	(803)	2411696
1562	17.9	5.3	2.7	chr21	38223659	38224025	(8485958)	C	L1MB8	LINE/L1	(1)	7037	6661	2412759
1516	20.3	5.0	3.9	chr21	38224043	38224444	(8485539)	C	LTR76	LTR/ERV1	(0)	675	214	2412760
9711	13.6	1.7	0.8	chr21	38227979	38229403	(8480580)	C	HERV3-int	LTR/ERV1	(6987)	1439	2	2412761
1428	21.9	5.0	3.9	chr21	38229404	38229805	(8480178)	C	LTR76	LTR/ERV1	(0)	675	214	2412761
34842	11.6	3.3	2.9	chr21	42922766	42924948	(3785035)	C	HERVH48-int	LTR/ERV1	(4147)	2507	256	2419570
1032	31.0	7.8	2.7	chr21	43296046	43296777	(3413206)	C	L1ME3	LINE/L1	(99)	6063	5254	2420120
11	22.1	0.0	4.9	chr21	44939893	44939933	(1770050)	+	(CCGCGAC)n	Simple_repeat	1	41	(0)	2422349
339	30.3	2.4	3.2	chr22	17601296	17601421	(33217047)	C	L2c	LINE/L2	(5)	3382	3258	2429329
2437	11.9	19.3	13.8	chr22	19316621	19316963	(31501505)	+	LTR76	LTR/ERV1	232	675	(0)	2431792
2647	15.0	3.7	8.0	chr22	19316967	19317023	(31501445)	C	L1MC2	LINE/L1	(370)	5974	5924	2431794
196	24.5	3.6	0.0	chr22	26541828	26541880	(24276588)	C	MIRb	SINE/MIR	(6)	262	208	2444554
790	22.7	15.3	5.4	chr22	27719592	27719907	(23098561)	C	MLT1H	LTR/ERVL-MaLR	(194)	355	3	2447367
369	27.3	5.5	4.0	chr22	27755911	27756036	(23062432)	+	MIRb	SINE/MIR	94	221	(47)	2447446
1216	16.9	0.5	2.7	chr22	28809016	28809234	(22009234)	C	MER20	DNA/hAT-Charlie	(4)	215	2	2449256
184	22.9	12.5	2.8	chr22	28809321	28809392	(22009076)	+	L2c	LINE/L2	3257	3336	(51)	2449257
251	27.5	6.2	0.0	chr22	30271341	30271431	(20547037)	+	MIR3	SINE/MIR	47	143	(65)	2452271
3882	16.4	2.7	5.7	chr22	30271437	30271764	(20546704)	+	L1MB7	LINE/L1	5283	5605	(579)	2452272
252	29.0	0.0	1.4	chr22	35575753	35575822	(15242646)	C	MIR3	SINE/MIR	(4)	204	136	2463330
381	26.6	5.0	0.0	chr22	35575923	35576035	(15242433)	+	MIR	SINE/MIR	16	134	(128)	2463331
529	22.8	13.4	0.0	chr22	40979883	40980044	(9838424)	C	LTR16C	LTR/ERVL	(0)	489	303	2474806
15	10.1	2.9	2.9	chr22	40980065	40980098	(9838370)	+	(ACAGC)n	Simple_repeat	1	35	(0)	2474807
691	15.4	9.3	3.7	chr22	40980122	40980283	(9838185)	C	MLT1A	LTR/ERVL-MaLR	(217)	173	2	2474805
479	34.8	2.3	5.4	chr22	42321561	42321664	(8496804)	+	MIR	SINE/MIR	48	146	(116)	2477796
2362	10.5	0.0	0.6	chr22	42321665	42321977	(8496491)	+	AluSx1	SINE/Alu	1	311	(1)	2477797
326	30.6	1.8	0.9	chr22	43231509	43231617	(7586851)	+	MIR3	SINE/MIR	64	173	(35)	2479856
3308	15.9	4.2	3.4	chr3	13457681	13457892	(184837667)	+	L1MB3	LINE/L1	5920	6131	(52)	2515289
304	9.0	0.0	1.9	chr3	13457900	13457957	(184837602)	+	L1MA9	LINE/L1	5995	6047	(244)	2515292
4022	6.8	2.3	0.0	chr3	20614383	20614883	(177680676)	C	MER9a2	LTR/ERVK	(0)	513	1	2526364
2747	20.2	4.2	0.7	chr3	23162292	23162883	(175132676)	+	L1MB8	LINE/L1	5559	6172	(6)	2529761
35912	6.3	0.7	0.1	chr3	49229259	49233690	(149061869)	+	HERVK9-int	LTR/ERVK	1561	6021	(0)	2570860
3122	6.5	0.5	0.3	chr3	49233691	49234078	(149061481)	+	MER9a3	LTR/ERVK	1	389	(123)	2570860
4265	15.2	5.7	0.3	chr3	53138315	53139105	(145156454)	C	L1MB7	LINE/L1	(47)	6137	5292	2577067
199	10.3	0.0	0.0	chr3	53139110	53139138	(145156421)	C	L2b	LINE/L2	(16)	3359	3331	2577068
396	25.0	4.4	10.1	chr3	59771806	59771974	(138523585)	C	Charlie4z	DNA/hAT-Charlie	(5)	162	4	2588013
1461	16.6	4.3	1.3	chr3	60940922	60941233	(137354326)	C	MER33	DNA/hAT-Charlie	(0)	324	3	2589754
512	25.7	18.6	6.1	chr3	60941234	60941311	(137354248)	C	MER5C1	DNA/hAT-Charlie	(167)	96	1	2589753
1456	20.7	6.8	8.5	chr3	61615666	61615950	(136679609)	C	L1MC4	LINE/L1	(975)	7067	6802	2590932
3760	14.1	3.2	1.6	chr3	72878188	72878843	(125416716)	C	L1MCa	LINE/L1	(4472)	2036	1330	2610117
3582	9.6	2.4	0.2	chr3	104281432	104281932	(94013627)	C	MER9a3	LTR/ERVK	(0)	512	1	2646864
34885	6.2	0.4	0.3	chr3	104281933	104286310	(94009249)	C	HERVK9-int	LTR/ERVK	(0)	6021	1638	2646864
12	23.3	4.4	0.0	chr3	107605772	107605816	(90689743)	+	(TAGTACA)n	Simple_repeat	1	47	(0)	2651121
294	23.5	0.0	4.5	chr3	107846301	107846389	(90449170)	C	LTR16E1	LTR/ERVL	(35)	503	419	2651419
3432	22.4	5.8	3.6	chr3	121739279	121739660	(76555899)	+	HAL1M8	LINE/L1	728	1117	(1874)	2670925
2726	20.4	6.3	2.8	chr3	121739661	121740376	(76555183)	+	L1MD2	LINE/L1	5590	6332	(27)	2670927
11150	5.5	0.3	0.5	chr3	126094941	126096369	(72199190)	+	HERVK9-int	LTR/ERVK	4595	6021	(0)	2678119
4150	6.9	0.8	1.9	chr3	126096370	126096888	(72198671)	+	MER9a2	LTR/ERVK	1	513	(0)	2678119
35939	6.1	0.2	0.3	chr3	129902413	129906802	(68388757)	+	HERVK9-int	LTR/ERVK	1637	6021	(0)	2684629
3749	7.8	2.5	0.4	chr3	129906803	129907243	(68388316)	+	MER9a3	LTR/ERVK	1	444	(68)	2684629
2172	14.7	11.2	0.5	chr3	153793567	153793948	(44501611)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2720269
9342	10.9	10.7	4.7	chr3	156218063	156219694	(42075865)	+	L1PBa	LINE/L1	636	2376	(4487)	2723739
2538	8.7	9.1	0.5	chr3	167176901	167177283	(31118276)	C	MER9a3	LTR/ERVK	(93)	419	1	2738409
28999	10.9	1.8	1.3	chr3	167177284	167182593	(31112966)	C	HERVK9-int	LTR/ERVK	(1250)	6184	786	2738409
3824	13.8	5.5	0.4	chr3	171854114	171854838	(26440721)	+	L1M3	LINE/L1	4068	4831	(1309)	2745191
2613	11.5	6.1	1.8	chr3	171854841	171855329	(26440230)	+	MER4B-int	LTR/ERV1	2109	2619	(4139)	2745192
757	7.7	5.6	1.7	chr3	172724211	172724329	(25571230)	+	HERVK14-int	LTR/ERVK	5973	6096	(0)	2746582
2012	11.4	8.3	3.0	chr3	172724333	172724743	(25570816)	+	LTR14B	LTR/ERVK	1	607	(1)	2746582
626	25.9	12.9	10.5	chr3	175393487	175393999	(22901560)	C	L1MC4	LINE/L1	(13)	8029	7503	2750317
3443	13.2	5.8	0.2	chr3	184085291	184085823	(14209736)	+	MER92C	LTR/ERV1	1	565	(25)	2763962
181	39.2	5.7	3.3	chr3	186302687	186302839	(11992720)	C	L2c	LINE/L2	(46)	3341	3185	2768105
2041	17.8	3.4	0.3	chr3	190950718	190951122	(7344437)	C	L1MA9	LINE/L1	(22)	6290	5783	2775880
4583	22.9	5.5	2.4	chr3	193247630	193249369	(5046190)	C	L1MA7	LINE/L1	(3191)	4371	2580	2779176
807	20.6	5.2	2.0	chr3	194324581	194325439	(3970120)	+	(CA)n	Simple_repeat	2	897	(0)	2780937
580	29.5	9.7	4.7	chr3	194491152	194491493	(3804066)	+	L2	LINE/L2	2346	2713	(706)	2781200
397	29.8	8.1	8.9	chr3	194491595	194492323	(3803236)	+	L2b	LINE/L2	2397	3129	(246)	2781204
15	5.6	0.0	0.0	chr3	194749443	194749461	(3546098)	+	(T)n	Simple_repeat	1	19	(0)	2781783
181	36.6	1.2	0.0	chr3	194874877	194874958	(3420601)	+	MamRTE1	LINE/RTE-BovB	2668	2750	(1062)	2782008
983	14.2	0.2	4.2	chr3	196499804	196499991	(1795568)	+	L1M4	LINE/L1	5296	5479	(699)	2785169
3244	18.9	2.0	0.9	chr3	196500001	196500645	(1794914)	+	L1MB3	LINE/L1	5490	6141	(42)	2785170
17	20.4	8.5	2.2	chr4	6782459	6782540	(183432015)	+	(CCCGCAG)n	Simple_repeat	1	89	(0)	2799089
192	29.6	0.0	0.0	chr4	11585377	11585430	(178629125)	C	MIRc	SINE/MIR	(109)	159	106	2806463
914	20.6	0.0	2.7	chr4	25223832	25223883	(164990672)	+	AluJr	SINE/Alu	122	173	(139)	2828529
3505	12.0	5.9	10.9	chr4	25223884	25224596	(164989959)	C	LTR76	LTR/ERV1	(0)	675	1	2828530
11150	7.4	0.1	0.6	chr4	35143248	35144693	(155069862)	+	HERVK9-int	LTR/ERVK	4582	6021	(0)	2843042
4058	7.2	0.0	1.0	chr4	35144694	35145211	(155069344)	+	MER9a2	LTR/ERVK	1	513	(0)	2843042
30	16.3	0.0	3.0	chr4	37977230	37977295	(152237260)	+	(CCCTC)n	Simple_repeat	1	66	(0)	2847045
2150	11.1	0.0	0.0	chr4	40721525	40721803	(149492752)	C	AluSx1	SINE/Alu	(33)	279	1	2852712
1074	31.6	14.9	3.6	chr4	40721804	40723171	(149491384)	+	L2a	LINE/L2	1709	3364	(62)	2852709
4045	12.7	2.8	6.7	chr4	41024456	41025157	(149189398)	+	LTR76	LTR/ERV1	1	674	(1)	2853308
8255	8.3	6.3	2.5	chr4	41025158	41025636	(149188919)	+	L1PA14	LINE/L1	5272	5780	(381)	2853307
45962	5.8	0.4	0.2	chr4	45042563	45048504	(145166051)	+	HERVK9-int	LTR/ERVK	1	6021	(0)	2859060
4089	6.5	0.0	1.5	chr4	45048505	45049024	(145165531)	+	MER9a3	LTR/ERVK	1	512	(0)	2859060
1605	14.4	16.1	9.8	chr4	70919798	70920212	(119294343)	C	MER41-int	LTR/ERV1	(2638)	3308	2842	2891483
2092	9.8	10.8	10.2	chr4	70944541	70944961	(119269594)	C	MSTA	LTR/ERVL-MaLR	(4)	424	1	2891539
3960	7.1	0.6	0.0	chr4	71863536	71864044	(118350511)	+	MER9a3	LTR/ERVK	1	512	(0)	2892762
2231	14.2	1.7	1.7	chr4	83378461	83378549	(106836006)	+	MER72	LTR/ERV1	365	454	(268)	2909409
1963	17.4	19.7	4.8	chr4	83378550	83379067	(106835488)	+	LTR18B	LTR/ERVL	1	614	(0)	2909415
10981	19.2	2.7	6.3	chr4	87243442	87244060	(102970495)	+	L1MB7	LINE/L1	1681	2319	(5198)	2915150
4096	6.6	0.2	0.0	chr4	91180683	91181194	(99033361)	C	MER9a1	LTR/ERVK	(0)	513	1	2920864
35831	5.6	3.2	0.2	chr4	91181195	91185949	(99028606)	C	HERVK9-int	LTR/ERVK	(0)	6021	1126	2920864
33397	6.2	2.3	0.1	chr4	99368132	99372622	(90841933)	+	HERVK9-int	LTR/ERVK	1436	6021	(0)	2931607
3627	9.3	1.4	0.2	chr4	99372623	99373128	(90841427)	+	MER9a3	LTR/ERVK	1	512	(0)	2931607
4109	6.0	1.6	0.2	chr4	99486388	99486892	(90727663)	C	MER9a3	LTR/ERVK	(0)	512	1	2931737
17582	5.9	0.4	0.3	chr4	99486893	99489189	(90725366)	C	HERVK9-int	LTR/ERVK	(0)	6021	3723	2931737
7964	15.7	5.0	3.9	chr4	122483750	122486436	(67728119)	C	HUERS-P1-int	LTR/ERV1	(1)	6262	2572	2962540
5847	11.9	14.3	2.5	chr4	128265256	128266341	(61948214)	C	MER11B	LTR/ERVK	(0)	1236	1	2970459
2986	10.3	9.2	0.0	chr4	135954866	135955330	(54259225)	C	MER9a3	LTR/ERVK	(0)	512	1	2979891
6153	7.6	1.7	0.2	chr4	135955333	135956147	(54258408)	C	HERVK9-int	LTR/ERVK	(2)	6019	5193	2979891
2375	15.0	5.8	6.1	chr4	139153481	139154137	(51060418)	+	MER4CL34	LTR/ERV1	18	872	(0)	2984039
314	27.2	12.0	1.8	chr4	146946295	146946478	(43268077)	C	L3b	LINE/CR1	(637)	3462	3294	2994985
2440	29.9	9.9	5.3	chr4	152214663	152216128	(37998427)	+	HAL1	LINE/L1	272	1812	(695)	3002643
3866	6.9	1.0	0.2	chr4	153688368	153688872	(36525683)	C	MER9a3	LTR/ERVK	(0)	512	4	3005064
33703	5.8	0.3	0.2	chr4	153688875	153693253	(36521302)	C	HERVK9-int	LTR/ERVK	(0)	6021	1638	3005064
48005	6.1	0.5	0.3	chr4	176344247	176350257	(13864298)	+	HERVK9-int	LTR/ERVK	1	6021	(0)	3035422
4202	5.1	0.4	0.4	chr4	176350258	176350769	(13863786)	+	MER9a3	LTR/ERVK	1	512	(0)	3035422
212	23.5	15.0	1.9	chr4	185238223	185238326	(4976229)	C	MIRb	SINE/MIR	(141)	127	8	3047953
20695	5.1	1.9	0.0	chr5	246675	249305	(181288954)	+	HERVK9-int	LTR/ERVK	3321	6003	(18)	3055188
253	30.4	3.7	2.6	chr5	249306	249325	(181288934)	+	L1M5	LINE/L1	4155	4171	(1975)	3055189
3648	6.0	8.0	0.0	chr5	249326	249795	(181288464)	+	MER9a3	LTR/ERVK	2	512	(0)	3055190
3516	5.5	8.0	0.0	chr5	1577862	1578332	(179959927)	C	MER9a3	LTR/ERVK	(0)	512	1	3056380
239	32.2	3.7	2.1	chr5	1578333	1578346	(179959913)	C	L1M5	LINE/L1	(1975)	4171	4160	3056379
11679	5.1	2.0	0.1	chr5	1578347	1579846	(179958413)	C	HERVK9-int	LTR/ERVK	(17)	6004	4477	3056381
27925	9.4	0.6	0.3	chr5	19703885	19708460	(161829799)	+	HERVK9-int	LTR/ERVK	1638	6184	(1250)	3079693
3409	7.1	6.2	0.4	chr5	19708465	19708946	(161829313)	+	MER9a3	LTR/ERVK	1	512	(0)	3079693
812	36.8	12.8	2.1	chr5	28144490	28145600	(153392659)	+	L2a	LINE/L2	1165	2412	(1007)	3090765
14693	10.4	5.5	2.9	chr5	34418322	34419913	(147118346)	+	MER4-int	LTR/ERV1	3878	5519	(1079)	3099770
3816	6.2	4.7	0.0	chr5	34781776	34782263	(146755996)	C	MER9a3	LTR/ERVK	(0)	512	1	3100407
14263	5.7	0.3	0.1	chr5	34782282	34784123	(146754136)	C	HERVK9-int	LTR/ERVK	(8)	6013	4167	3100407
8223	17.2	11.1	2.3	chr5	36138904	36140500	(145397759)	+	MER52A	LTR/ERV1	1	1755	(0)	3102337
1227	26.0	8.1	10.2	chr5	37936240	37936519	(143601740)	C	L1ME3D	LINE/L1	(27)	5876	5584	3105277
8910	19.1	1.0	1.0	chr5	40923953	40925603	(140612656)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1651	1	3109690
11188	6.8	0.1	1.2	chr5	44791574	44793017	(136745242)	+	HERVK9-int	LTR/ERVK	4594	6021	(0)	3114690
4060	6.7	0.4	0.2	chr5	44793018	44793529	(136744730)	+	MER9a2	LTR/ERVK	1	513	(0)	3114690
1132	5.7	0.0	0.7	chr5	44989679	44989819	(136548440)	+	HERVK9-int	LTR/ERVK	5882	6021	(0)	3114981
4020	8.0	0.0	0.0	chr5	44989820	44990332	(136547927)	+	MER9a2	LTR/ERVK	1	513	(0)	3114981
941	32.5	12.4	8.4	chr5	50717032	50718144	(130820115)	C	L2a	LINE/L2	(515)	2904	1741	3116861
8942	11.2	6.1	1.3	chr5	51925611	51927124	(129611135)	+	MER57-int	LTR/ERV1	3291	4870	(2667)	3118358
657	24.5	4.6	5.0	chr5	52621696	52621914	(128916345)	+	MER102c	DNA/hAT-Charlie	88	324	(2104)	3119200
2077	13.6	10.8	3.8	chr5	60717458	60717854	(120820405)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3131230
549	27.1	12.3	6.8	chr5	61256455	61256822	(120281437)	C	MLT1L	LTR/ERVL-MaLR	(219)	391	1	3131983
1583	27.6	5.4	5.2	chr5	66239120	66239751	(115298508)	C	L2a	LINE/L2	(5)	3421	2814	3139147
479	28.6	7.0	9.4	chr5	66840933	66841167	(114697092)	+	MIRb	SINE/MIR	8	240	(28)	3140009
376	24.4	8.0	0.0	chr5	67897025	67897139	(113641120)	C	LTR16C	LTR/ERVL	(7)	482	358	3141371
446	25.0	1.4	0.0	chr5	67897169	67897304	(113640955)	C	LTR37A	LTR/ERV1	(0)	426	289	3141372
15593	15.4	3.0	2.0	chr5	68565374	68570851	(112967408)	+	L1PB1	LINE/L1	810	6332	(535)	3142452
5560	1.2	0.0	0.0	chr5	82047823	82048464	(99489795)	C	L1PA3	LINE/L1	(1098)	5048	4407	3164075
1511	25.9	19.4	0.2	chr5	91006252	91007274	(90530985)	C	Arthur1B	DNA/hAT-Tip100	(0)	1225	1	3175502
9233	16.4	2.3	0.6	chr5	101175842	101177444	(80360815)	+	MSTA-int	LTR/ERVL-MaLR	1	1630	(1)	3188626
1454	23.2	11.6	2.6	chr5	103353186	103353570	(78184689)	+	MLT1H1	LTR/ERVL-MaLR	1	424	(131)	3191322
4196	6.2	0.0	1.4	chr5	113716097	113716616	(67821643)	+	MER9a2	LTR/ERVK	1	513	(0)	3204660
3735	8.7	6.0	0.0	chr5	115036095	115036575	(66501684)	C	MER9a3	LTR/ERVK	(0)	512	1	3206230
37415	7.1	0.7	0.0	chr5	115036576	115041207	(66497052)	C	HERVK9-int	LTR/ERVK	(0)	6021	1360	3206230
13	21.7	0.0	2.6	chr5	116226940	116226978	(65311281)	+	(CATTT)n	Simple_repeat	1	39	(0)	3207871
2726	13.8	1.6	5.7	chr5	117713347	117713854	(63824405)	+	LTR76	LTR/ERV1	187	673	(2)	3209952
987	21.9	1.7	11.2	chr5	125606348	125606560	(55931699)	+	MLT2B3	LTR/ERVL	111	297	(257)	3220252
366	13.0	0.0	0.0	chr5	127881948	127882001	(53656258)	+	Alu	SINE/Alu	1	54	(79)	3223410
300	22.2	0.0	14.7	chr5	128024660	128024754	(53513505)	C	MIR3	SINE/MIR	(27)	181	101	3223632
11	25.1	0.0	4.3	chr5	130089992	130090037	(51448222)	+	(TCTTTCT)n	Simple_repeat	1	46	(0)	3226118
1276	21.9	3.6	3.6	chr5	133919638	133919971	(47618288)	+	Tigger7	DNA/TcMar-Tigger	1	334	(5)	3231580
957	25.2	6.5	3.9	chr5	133920001	133920330	(47617929)	C	MLT1C	LTR/ERVL-MaLR	(29)	438	100	3231581
2190	14.6	11.7	0.5	chr5	139187770	139188149	(42350110)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	3240243
1007	11.6	3.4	2.0	chr5	154469817	154470018	(27068241)	+	MER33	DNA/hAT-Charlie	101	305	(19)	3267214
280	29.1	2.8	13.5	chr5	154470125	154470287	(27067972)	+	MIRc	SINE/MIR	57	207	(61)	3267215
13	28.9	0.0	0.0	chr5	168240712	168240754	(13297505)	+	A-rich	Low_complexity	1	43	(0)	3289617
482	33.5	5.1	2.0	chr5	171810697	171811000	(9727259)	+	L2	LINE/L2	2578	2891	(528)	3296093
3062	21.1	2.9	4.3	chr5	171811019	171811321	(9726938)	C	Tigger17a	DNA/TcMar-Tigger	(8)	646	359	3296094
1236	29.4	8.6	3.3	chr5	174404779	174405807	(7132452)	+	L2a	LINE/L2	2338	3426	(0)	3301446
438	26.1	11.1	4.3	chr5	175547448	175547631	(5990628)	+	MIRb	SINE/MIR	55	252	(16)	3303609
8110	6.3	1.2	0.2	chr5	177561137	177562133	(3976126)	+	LTR13	LTR/ERVK	1	1007	(0)	3307628
899	21.6	11.2	3.6	chr5	180193355	180193456	(1344803)	+	Charlie5	DNA/hAT-Charlie	2522	2624	(0)	3312210
941	30.0	7.7	5.7	chr5	180193491	180194048	(1344211)	+	L1MC5a	LINE/L1	2208	2777	(0)	3312213
2774	24.6	8.1	5.1	chr5	181073276	181074397	(463862)	+	L1MC2	LINE/L1	1002	2254	(5498)	3313607
560	23.1	0.9	0.0	chr5	181167886	181167993	(370266)	+	FLAM_A	SINE/Alu	1	109	(33)	3313768
2249	26.6	6.1	1.5	chr5	181168056	181168858	(369401)	+	L1MD2	LINE/L1	5474	6346	(13)	3313767
290	33.9	1.1	5.5	chr6	6962081	6962261	(163843718)	C	MER5B	DNA/hAT-Charlie	(0)	178	6	3324288
13	24.7	0.0	0.0	chr6	11318347	11318381	(159487598)	+	GA-rich	Low_complexity	1	35	(0)	3331058
2834	10.6	2.8	0.2	chr6	13256982	13257398	(157548581)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3333956
587	30.8	10.6	5.2	chr6	14161829	14162191	(156643788)	C	L3	LINE/CR1	(3686)	413	29	3335559
599	27.8	9.1	1.9	chr6	14671677	14671889	(156134090)	+	MLT1J2	LTR/ERVL-MaLR	17	246	(202)	3336358
490	33.1	12.7	1.3	chr6	16787622	16788157	(154017822)	C	L2b	LINE/L2	(1216)	2203	1598	3340055
628	28.7	3.9	5.4	chr6	17402031	17402291	(153403688)	+	Charlie2a	DNA/hAT-Charlie	1	257	(2604)	3341094
350	25.4	1.7	2.6	chr6	17402401	17402515	(153403464)	+	Charlie2b	DNA/hAT-Charlie	1777	1890	(892)	3341095
188	26.5	9.3	5.6	chr6	19838790	19838861	(150967118)	+	AmnSINE2	SINE/tRNA-Deu	24	98	(260)	3344999
18	4.2	0.0	0.0	chr6	27294103	27294127	(143511852)	+	(TCT)n	Simple_repeat	1	25	(0)	3356665
748	0.0	0.0	0.0	chr6	27495814	27495895	(143310084)	+	tRNA-Ser-TCY	tRNA	1	82	(3)	3356989
651	0.0	0.0	0.0	chr6	27592821	27592892	(143213087)	C	tRNA-Met-i	tRNA	(3)	72	1	3357179
2178	12.1	1.0	0.3	chr6	27894136	27894440	(142911539)	C	AluSg4	SINE/Alu	(3)	307	1	3357785
749	0.0	0.0	0.0	chr6	28213037	28213118	(142592861)	+	tRNA-Ser-AGY	tRNA	1	82	(3)	3358258
1840	23.1	5.8	0.4	chr6	39358079	39358531	(131447448)	+	LTR75	LTR/ERVL	1	479	(83)	3377945
605	19.8	10.5	1.9	chr6	42769795	42770010	(128035969)	C	MER112	DNA/hAT-Charlie	(21)	240	4	3383992
211	31.8	2.3	5.6	chr6	42770117	42770206	(128035773)	+	L2c	LINE/L2	3055	3141	(246)	3383993
364	27.1	8.0	2.0	chr6	43297235	43297399	(127508580)	+	MIR3	SINE/MIR	30	203	(65)	3385088
26743	6.0	2.2	0.3	chr6	45236893	45241193	(125564786)	+	HERVK9-int	LTR/ERVK	1637	6021	(0)	3388349
4216	5.4	0.2	0.0	chr6	47312692	47313195	(123492784)	C	MER9a1	LTR/ERVK	(8)	505	1	3391556
2653	7.4	15.1	0.5	chr6	47313196	47313830	(123492149)	C	HERVK9-int	LTR/ERVK	(0)	6021	5294	3391556
446	33.4	4.5	8.4	chr6	53052757	53053153	(117752826)	+	Charlie8	DNA/hAT-Charlie	107	491	(1937)	3399468
474	30.2	9.0	6.0	chr6	55212366	55212731	(115593248)	+	MLT1L	LTR/ERVL-MaLR	121	498	(112)	3402653
329	26.8	1.1	1.1	chr6	56439415	56439501	(114366478)	+	MLT1O	LTR/ERVL-MaLR	117	203	(339)	3404178
1344	35.5	10.9	2.6	chr6	56659264	56660334	(114145645)	C	L2	LINE/L2	(1098)	2321	1152	3404405
3996	7.3	0.0	1.2	chr6	70445359	70445869	(100360110)	C	MER9a2	LTR/ERVK	(8)	505	1	3419225
7569	6.8	0.5	0.2	chr6	70445870	70446834	(100359145)	C	HERVK9-int	LTR/ERVK	(0)	6021	5054	3419225
807	26.4	8.4	3.5	chr6	82088085	82088367	(88717612)	C	MER45C	DNA/hAT-Tip100	(650)	303	6	3434627
4008	12.8	1.5	6.3	chr6	88031106	88031815	(82774164)	+	LTR76	LTR/ERV1	1	675	(0)	3442608
2337	15.2	3.8	1.4	chr6	88031820	88032370	(82773609)	C	L1MC2	LINE/L1	(630)	5714	5143	3442606
2337	10.3	0.0	1.0	chr6	89818036	89818347	(80987632)	+	AluSx	SINE/Alu	1	309	(3)	3445424
777	17.8	0.0	0.0	chr6	89818352	89818480	(80987499)	+	FLAM_C	SINE/Alu	1	129	(14)	3445425
5632	21.2	10.9	3.1	chr6	93196130	93197666	(77608313)	+	L1ME1	LINE/L1	45	1710	(4690)	3449799
898	18.8	10.7	0.0	chr6	97226789	97226980	(73578999)	C	MER20	DNA/hAT-Charlie	(4)	215	1	3454687
256	32.8	16.7	5.3	chr6	104976459	104976857	(65829122)	C	L2c	LINE/L2	(20)	3367	2914	3464732
430	37.0	3.6	6.3	chr6	107339413	107339778	(63466201)	C	L2c	LINE/L2	(0)	3387	3032	3468712
24	23.5	3.6	2.3	chr6	107958112	107958194	(62847785)	+	(GCC)n	Simple_repeat	1	86	(0)	3469654
267	19.1	0.0	0.0	chr6	110807241	110807282	(59998697)	+	AluJb	SINE/Alu	196	237	(65)	3474348
4026	7.0	0.2	0.2	chr6	113263409	113263920	(57542059)	C	MER9a3	LTR/ERVK	(0)	512	1	3478186
7452	6.3	0.3	0.2	chr6	113263921	113265101	(57540878)	C	HERVK9-int	LTR/ERVK	(0)	6021	4774	3478186
3743	10.9	1.5	2.0	chr6	122504845	122505395	(48300584)	C	LTR14	LTR/ERVK	(0)	548	1	3490493
21007	17.8	5.5	5.6	chr6	122505399	122506694	(48299285)	C	HERVKC4-int	LTR/ERVK	(7)	5255	3955	3490493
250	37.3	1.8	0.9	chr6	125052738	125052848	(45753131)	C	L3	LINE/CR1	(354)	3745	3634	3493774
294	33.0	13.2	7.0	chr6	125052989	125053376	(45752603)	+	L2c	LINE/L2	2972	3387	(0)	3493778
522	28.5	3.5	4.9	chr6	138541555	138541815	(32264164)	+	LTR81B	LTR/Gypsy	891	1392	(1)	3513126
4698	14.8	5.5	5.2	chr6	148651713	148654594	(22151385)	+	MER57-int	LTR/ERV1	924	5551	(1986)	3527259
303	30.2	10.8	2.5	chr6	154852968	154853086	(15952893)	+	L2c	LINE/L2	3258	3387	(0)	3537155
299	29.8	7.9	10.7	chr6	157264521	157264689	(13541290)	+	MIRb	SINE/MIR	55	218	(50)	3540634
2136	12.0	0.7	4.9	chr6	157281302	157281626	(13524353)	+	AluSx1	SINE/Alu	1	311	(1)	3540672
1200	17.1	4.1	0.0	chr6	158143794	158144003	(12661976)	+	MER20	DNA/hAT-Charlie	1	219	(0)	3542008
17656	5.6	0.9	0.2	chr6	165461379	165463662	(5342317)	+	HERVK9-int	LTR/ERVK	3723	6021	(0)	3551984
4243	4.7	0.6	1.2	chr6	165463663	165464178	(5341801)	+	MER9a2	LTR/ERVK	1	513	(0)	3551984
4159	6.1	0.4	0.0	chr6	170593081	170593589	(212390)	C	MER9a3	LTR/ERVK	(0)	512	2	3557629
9541	5.5	0.9	0.2	chr6	170593591	170594829	(211150)	C	HERVK9-int	LTR/ERVK	(0)	6021	4774	3557629
12	26.4	2.2	0.0	chr7	332851	332895	(159013078)	+	(CGCCCG)n	Simple_repeat	1	46	(0)	3558213
3840	19.0	1.5	9.1	chr7	624711	625724	(158720249)	+	L1MC	LINE/L1	2481	3356	(2790)	3558606
227	26.9	11.4	0.0	chr7	2482229	2482327	(156863646)	+	MIR1_Amn	SINE/MIR	83	194	(74)	3561511
241	28.7	0.0	3.1	chr7	8285563	8285659	(151060314)	+	MLT1N2	LTR/ERVL-MaLR	462	555	(7)	3572317
4516	19.4	10.2	1.5	chr7	12295676	12296653	(147049320)	+	LTR27E	LTR/ERV1	1	1073	(4)	3577212
2029	17.6	8.2	0.5	chr7	13034765	13035157	(146310816)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	3578198
493	16.7	12.0	7.2	chr7	22139540	22139735	(137206238)	C	Arthur1B	DNA/hAT-Tip100	(5)	172	1	3590256
2792	18.3	0.5	10.4	chr7	30421550	30422182	(128923791)	C	LTR73	LTR/ERV1	(2)	570	1	3603112
1234	27.6	14.5	4.7	chr7	33997168	33997296	(125348677)	+	L2a	LINE/L2	2791	2962	(457)	3608690
11721	5.5	0.4	0.6	chr7	35910686	35912115	(123433858)	+	HERVK9-int	LTR/ERVK	4594	6021	(0)	3611391
4324	6.0	0.0	0.0	chr7	35912116	35912628	(123433345)	+	MER9a2	LTR/ERVK	1	513	(0)	3611391
2579	21.4	8.8	9.9	chr7	43190972	43191827	(116154146)	C	LTR102_Mam	LTR/ERVL	(4)	847	3	3622254
3888	6.3	3.5	0.2	chr7	43859699	43860193	(115485780)	C	MER9a3	LTR/ERVK	(0)	512	1	3623312
14576	7.8	0.4	0.3	chr7	43860194	43862028	(115483945)	C	HERVK9-int	LTR/ERVK	(0)	6021	4185	3623312
4160	6.3	0.8	0.0	chr7	45726259	45726767	(113619206)	C	MER9a2	LTR/ERVK	(0)	513	1	3626272
893	4.3	0.0	0.8	chr7	45726768	45726885	(113619088)	C	HERVK9-int	LTR/ERVK	(0)	6021	5905	3626272
4266	5.7	0.2	0.2	chr7	56152939	56153451	(103192522)	+	MER9a2	LTR/ERVK	1	513	(0)	3640042
290	31.6	5.1	3.5	chr7	73833399	73833572	(85512401)	+	L2c	LINE/L2	2980	3156	(231)	3665587
16017	21.5	2.9	2.1	chr7	86533687	86535489	(72810484)	C	L1PA15	LINE/L1	(5587)	2568	819	3686063
3846	18.1	8.6	0.5	chr7	90667286	90667575	(68678398)	C	L1MB7	LINE/L1	(19)	6165	5827	3691471
3891	6.9	1.0	0.4	chr7	94722293	94722801	(64623172)	C	MER9a3	LTR/ERVK	(0)	512	1	3697018
48326	6.0	0.5	0.1	chr7	94722802	94728800	(64617173)	C	HERVK9-int	LTR/ERVK	(0)	6021	1	3697018
1780	18.3	1.1	0.3	chr7	99129408	99129691	(60216282)	C	AluJo	SINE/Alu	(26)	286	1	3704015
1850	22.5	16.2	2.4	chr7	112074417	112075098	(47270875)	+	LTR50	LTR/ERVL	1	795	(0)	3725255
2823	10.6	1.6	0.5	chr7	112246867	112247294	(47098679)	+	LTR56	LTR/ERV1	12	444	(1)	3725501
318	27.8	8.0	1.7	chr7	112790794	112790910	(46555063)	+	L2a	LINE/L2	3296	3420	(6)	3726300
614	19.6	0.0	0.0	chr7	114099659	114099760	(45246213)	C	MER2	DNA/TcMar-Tigger	(0)	345	244	3727942
838	23.5	7.2	2.9	chr7	114099762	114100041	(45245932)	+	L1MA9	LINE/L1	5982	6274	(38)	3727943
13	21.1	0.0	6.1	chr7	120289306	120289354	(39056619)	+	A-rich	Low_complexity	1	49	(0)	3736170
9538	14.2	3.9	0.2	chr7	126275105	126276625	(33069348)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1580	2	3744220
12	13.7	0.0	0.0	chr7	128783387	128783410	(30562563)	+	(CTG)n	Simple_repeat	1	24	(0)	3747962
653	0.0	0.0	0.0	chr7	128783450	128783521	(30562452)	+	tRNA-Pro-CCY	tRNA	1	72	(3)	3747963
13050	12.6	2.5	4.6	chr7	128898356	128900883	(30445090)	+	PABL_A-int	LTR/ERV1	2640	5943	(3)	3748111
30	7.7	0.0	0.0	chr7	131244659	131244700	(28101273)	+	(GTGATGACG)n	Simple_repeat	1	42	(0)	3752446
3948	25.2	8.6	8.6	chr7	131335567	131338619	(28007354)	C	L1MEg	LINE/L1	(3131)	4106	2	3752623
727	23.6	6.3	2.2	chr7	133241304	133241501	(26104472)	C	L1ME3A	LINE/L1	(84)	6158	5877	3755659
321	31.8	9.0	1.5	chr7	134845574	134845768	(24500205)	C	L2	LINE/L2	(966)	2453	2243	3758119
2239	10.5	0.0	0.0	chr7	140540713	140541016	(18804957)	C	AluSx	SINE/Alu	(7)	305	2	3767712
9178	19.6	3.0	0.9	chr7	149527865	149529552	(9816421)	+	LTR25-int	LTR/ERV1	36	1760	(5428)	3780816
3684	6.8	4.9	0.2	chr7	152038128	152038615	(7307358)	C	MER9a3	LTR/ERVK	(0)	512	1	3784475
19158	5.2	1.9	0.1	chr7	152038616	152040933	(7305040)	C	HERVK9-int	LTR/ERVK	(0)	6021	3662	3784475
1170	25.2	8.4	4.8	chr7	152076317	152076753	(7269220)	C	LTR16C	LTR/ERVL	(4)	485	32	3784517
190	31.3	8.5	6.3	chr7	155946005	155946222	(3399751)	C	MIRb	SINE/MIR	(35)	233	7	3790299
18	18.9	4.2	0.0	chr8	9933877	9933924	(135204712)	+	(GCCTC)n	Simple_repeat	1	50	(0)	3807297
2246	18.1	2.0	2.4	chr8	10089573	10090031	(135048605)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	1	3807563
331	37.3	14.9	2.3	chr8	13566020	13566318	(131572318)	C	L2b	LINE/L2	(3)	3372	3030	3812888
18	12.4	0.0	2.7	chr8	13566342	13566378	(131572258)	+	(CCGCCC)n	Simple_repeat	1	37	(0)	3812889
1845	17.6	4.9	0.6	chr8	21672668	21673016	(123465620)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	3824815
2041	7.8	0.0	4.1	chr8	22437908	22438177	(122700459)	+	AluSc	SINE/Alu	41	299	(10)	3826233
268	36.2	4.2	3.1	chr8	22631441	22631631	(122507005)	C	MIRc	SINE/MIR	(52)	216	24	3826560
305	32.3	2.0	1.0	chr8	23715126	23715225	(121423411)	C	MIRc	SINE/MIR	(72)	196	96	3828398
29	19.9	0.0	0.0	chr8	26867414	26867467	(118271169)	+	(GT)n	Simple_repeat	1	54	(0)	3833461
273	39.6	4.0	0.8	chr8	27373881	27374147	(117764489)	+	L3	LINE/CR1	3716	3991	(108)	3834272
2532	14.7	3.4	1.1	chr8	27557494	27557926	(117580710)	+	LTR56	LTR/ERV1	3	445	(0)	3834577
3948	6.4	2.5	1.6	chr8	30147066	30147572	(114991064)	C	MER9a3	LTR/ERVK	(0)	512	1	3839148
10187	5.7	0.2	0.1	chr8	30147573	30148796	(114989840)	C	HERVK9-int	LTR/ERVK	(0)	6021	4797	3839148
2440	29.0	11.4	4.4	chr8	37426624	37428323	(107710313)	+	L1MEd	LINE/L1	264	2098	(4988)	3850309
2398	30.4	6.3	5.5	chr8	37435026	37435461	(107703175)	C	ERVL-E-int	LTR/ERVL	(4346)	1368	927	3850324
1192	26.8	4.0	4.2	chr8	37657719	37658137	(107480499)	C	MLT1J	LTR/ERVL-MaLR	(43)	469	76	3850721
375	28.8	17.2	2.4	chr8	38431216	38431461	(106707175)	+	L2b	LINE/L2	3082	3371	(4)	3852270
10806	6.6	0.1	0.3	chr8	39874053	39875482	(105263154)	+	HERVK9-int	LTR/ERVK	4594	6021	(0)	3854440
4088	5.3	0.6	2.9	chr8	39875483	39876006	(105262630)	+	MER9a3	LTR/ERVK	1	512	(0)	3854440
2015	10.6	0.7	0.0	chr8	42183038	42183302	(102955334)	C	AluSx	SINE/Alu	(45)	267	1	3858288
192	25.5	0.0	2.1	chr8	42207789	42207836	(102930800)	C	L3	LINE/CR1	(1)	4098	4052	3858340
2238	19.8	14.0	5.0	chr8	42486494	42486864	(102651772)	C	L1M4b	LINE/L1	(4561)	2306	1906	3858874
260	25.0	1.2	2.4	chr8	42959840	42959921	(102178715)	+	L1MC5	LINE/L1	9167	9247	(57)	3859824
12211	16.9	6.5	4.7	chr8	43109840	43110635	(102028001)	C	MER41-int	LTR/ERV1	(2286)	3660	3013	3860135
9952	7.7	0.5	0.2	chr8	46879517	46880765	(98257871)	+	HERVK9-int	LTR/ERVK	4769	6021	(0)	3861219
4060	7.8	0.4	0.6	chr8	46880766	46881278	(98257358)	+	MER9a3	LTR/ERVK	1	512	(0)	3861219
3554	12.0	4.7	1.1	chr8	47243310	47243900	(97894736)	+	LTR38B	LTR/ERV1	1	711	(0)	3861648
4277	6.2	0.0	0.0	chr8	48244515	48245027	(96893609)	C	MER9a2	LTR/ERVK	(0)	513	1	3863132
10088	5.4	4.7	0.1	chr8	48245028	48247174	(96891462)	C	HERVK9-int	LTR/ERVK	(0)	6021	3723	3863132
2583	16.9	4.2	2.5	chr8	52806115	52806623	(92332013)	C	LTR61	LTR/ERV1	(0)	559	42	3868711
3664	8.2	4.7	0.2	chr8	52979863	52980351	(92158285)	C	MER9a3	LTR/ERVK	(0)	512	1	3868954
721	8.6	0.0	1.1	chr8	52980352	52980445	(92158191)	C	HERVK9-int	LTR/ERVK	(0)	6021	5929	3868954
48726	6.6	0.5	0.3	chr8	53617580	53623586	(91515050)	+	HERVK9-int	LTR/ERVK	1	6019	(2)	3869713
3901	5.5	3.3	0.4	chr8	53623589	53624085	(91514551)	+	MER9a3	LTR/ERVK	1	512	(0)	3869713
1166	24.6	7.5	4.4	chr8	73224699	73225149	(71913487)	C	MLT1C	LTR/ERVL-MaLR	(1)	466	1	3897654
1194	14.4	0.0	0.0	chr8	74303588	74303747	(70834889)	C	AluJo	SINE/Alu	(16)	296	137	3899498
546	32.4	14.4	4.3	chr8	74303748	74304220	(70834416)	+	L2b	LINE/L2	2731	3289	(86)	3899497
34927	6.1	0.6	0.2	chr8	75045235	75049598	(70089038)	+	HERVK9-int	LTR/ERVK	1637	6021	(0)	3900463
4031	6.3	0.6	0.0	chr8	75049599	75050107	(70088529)	+	MER9a3	LTR/ERVK	1	512	(0)	3900463
15130	3.6	0.0	0.2	chr8	78652303	78654089	(66484547)	+	HERVK14C-int	LTR/ERVK	5652	7434	(0)	3904956
402	32.8	13.4	10.1	chr8	81724756	81724992	(63413644)	+	L2b	LINE/L2	2914	3187	(188)	3909689
23286	15.9	2.8	3.5	chr8	89892184	89898369	(55240267)	+	L1MA3	LINE/L1	8	6230	(1335)	3920459
12412	11.6	2.6	1.8	chr8	92205686	92207965	(52930671)	C	MER41-int	LTR/ERV1	(1110)	4836	1269	3923593
2133	12.0	2.9	2.3	chr8	94059937	94060245	(51078391)	C	AluSz	SINE/Alu	(0)	312	2	3926251
659	25.1	9.3	5.1	chr8	94060248	94060351	(51078285)	C	L1ME4b	LINE/L1	(207)	685	584	3926252
1046	20.6	15.2	0.4	chr8	94920246	94920513	(50218123)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	94	3927826
704	26.6	7.3	3.2	chr8	103132740	103132988	(42005648)	+	MIRb	SINE/MIR	7	266	(2)	3941803
12	16.8	8.8	3.2	chr8	103299019	103299075	(41839561)	+	G-rich	Low_complexity	1	62	(0)	3942080
253	27.0	3.1	0.0	chr8	118432971	118433033	(26705603)	+	L3	LINE/CR1	3961	4025	(74)	3963310
35172	5.3	2.7	0.9	chr8	126008824	126013477	(19125159)	+	HERVK9-int	LTR/ERVK	1280	6020	(1)	3976743
4066	6.2	1.8	0.0	chr8	126013479	126013982	(19124654)	+	MER9a1	LTR/ERVK	1	513	(0)	3976743
237	21.8	4.9	3.7	chr8	130265135	130265215	(14873421)	+	L2b	LINE/L2	3292	3373	(2)	3984679
817	27.1	1.6	4.6	chr8	134993482	134993806	(10144830)	C	L2a	LINE/L2	(0)	3426	3112	3993276
492	29.4	14.2	3.0	chr8	134993800	134994104	(10144532)	C	L2a	LINE/L2	(478)	2941	2597	3993276
14051	6.3	0.3	0.2	chr8	136908425	136910185	(8228451)	C	HERVK9-int	LTR/ERVK	(0)	6021	4258	3996393
394	25.5	9.3	3.0	chr8	142718193	142718394	(2420242)	C	LTR50	LTR/ERVL	(554)	241	26	4005222
596	24.4	6.3	0.0	chr8	144830314	144830522	(308114)	C	L1M5	LINE/L1	(700)	5494	5272	4008166
27602	5.5	0.2	0.1	chr8	145028836	145032160	(106476)	+	HERVK14C-int	LTR/ERVK	4106	7434	(0)	4008437
4562	6.1	4.8	0.0	chr8	145032161	145032719	(105917)	+	LTR14C	LTR/ERVK	1	587	(0)	4008437
4303	11.0	2.8	0.7	chr9	2562525	2563219	(135831498)	+	L1MA3	LINE/L1	5596	6305	(0)	4012295
8715	13.4	5.4	1.9	chr9	33704876	33705835	(104688882)	+	MER41-int	LTR/ERV1	2606	3961	(3855)	4055844
2266	10.8	0.3	0.3	chr9	37541832	37542128	(100852589)	C	AluSp	SINE/Alu	(16)	297	1	4062890
306	30.6	0.0	0.0	chr9	68691862	68691946	(69702771)	C	HAL1M8	LINE/L1	(105)	2886	2802	4080276
527	23.9	12.9	0.0	chr9	68691969	68692123	(69702594)	C	MIR	SINE/MIR	(76)	186	9	4080277
401	30.9	4.5	6.4	chr9	70644057	70644260	(67750457)	C	L2a	LINE/L2	(0)	3426	3227	4083536
398	36.2	0.7	0.0	chr9	70644304	70644444	(67750273)	C	FordPrefect	DNA/hAT-Tip100	(1257)	426	285	4083537
1129	22.4	4.1	6.0	chr9	77183205	77183574	(61211143)	C	L1ME1	LINE/L1	(11)	6168	5806	4093916
2211	11.7	1.0	0.0	chr9	85727048	85727338	(52667379)	+	AluSx	SINE/Alu	1	294	(18)	4106630
3804	21.0	8.5	6.8	chr9	85727351	85727732	(52666985)	+	Charlie6	DNA/hAT-Charlie	1568	1966	(1534)	4106631
10546	13.7	0.9	2.8	chr9	87455386	87456336	(50938381)	C	MSTA-int	LTR/ERVL-MaLR	(710)	921	1	4109509
47	17.6	4.8	4.0	chr9	89497978	89498122	(48896595)	+	(GGC)n	Simple_repeat	1	152	(0)	4112563
26	25.9	7.2	4.2	chr9	89498148	89498327	(48896390)	+	(CCTT)n	Simple_repeat	1	193	(0)	4112564
4545	5.7	0.2	0.0	chr9	93751064	93751574	(44643143)	C	MER9a2	LTR/ERVK	(0)	513	2	4118527
11179	6.0	0.7	0.4	chr9	93751576	93752941	(44641776)	C	HERVK9-int	LTR/ERVK	(0)	6021	4652	4118527
1367	28.1	9.0	0.1	chr9	110590337	110590839	(27803878)	C	L1MD2	LINE/L1	(5494)	1146	591	4146517
3541	20.3	0.9	2.3	chr9	112756871	112757648	(25637069)	C	L1MA9	LINE/L1	(38)	6274	5508	4150455
31	5.8	0.0	0.0	chr9	120581910	120581945	(17812772)	+	(TC)n	Simple_repeat	1	36	(0)	4165289
720	22.7	7.9	2.8	chr9	123408418	123408635	(14986082)	C	MIRb	SINE/MIR	(36)	232	2	4170663
10793	14.0	2.9	5.0	chr9	125569676	125571574	(12823143)	+	PABL_A-int	LTR/ERV1	2209	4626	(1320)	4174909
533	30.1	15.3	3.2	chr9	128186324	128186880	(10207837)	+	L2c	LINE/L2	2520	3167	(220)	4179925
50	22.7	2.4	0.8	chr9	130990562	130990687	(7404030)	+	(CA)n	Simple_repeat	1	129	(0)	4186146
2296	10.5	0.3	1.9	chr9	136868156	136868469	(1526248)	+	AluSc	SINE/Alu	1	309	(0)	4194893
725	29.5	3.8	0.0	chr9	136868471	136868724	(1525993)	C	Arthur1	DNA/hAT-Tip100	(3636)	311	48	4194892
1559	27.5	5.7	3.0	chrX	15743000	15743519	(140297376)	+	L2a	LINE/L2	2875	3411	(15)	4384875
336	27.1	6.9	1.6	chrX	19693197	19693320	(136347575)	+	L2a	LINE/L2	3295	3425	(1)	4391792
2689	24.4	5.4	5.8	chrX	24326325	24327254	(131713641)	+	L1MC4	LINE/L1	6833	7758	(284)	4399311
1318	9.6	4.3	0.0	chrX	37473451	37473649	(118567246)	+	LTR56	LTR/ERV1	128	335	(110)	4417444
3626	8.4	1.7	1.5	chrX	37473650	37474330	(118566565)	+	L1M1	LINE/L1	5111	5787	(517)	4417445
193	32.9	10.8	1.4	chrX	40933967	40934108	(115106787)	+	MIRb	SINE/MIR	18	174	(94)	4423327
796	26.5	19.9	4.2	chrX	44675312	44675736	(111365159)	+	MLT1H	LTR/ERVL-MaLR	27	534	(15)	4429447
437	30.3	8.8	4.2	chrX	48972550	48972766	(107068129)	+	MIRb	SINE/MIR	22	249	(19)	4437197
12317	13.9	4.6	3.0	chrX	54850841	54851442	(101189453)	C	PABL_A-int	LTR/ERV1	(2517)	2498	1359	4446454
3955	7.7	0.6	0.2	chrX	57203018	57203527	(98837368)	C	MER9a3	LTR/ERVK	(0)	512	1	4448874
7421	7.2	0.3	0.0	chrX	57203541	57204491	(98836404)	C	HERVK9-int	LTR/ERVK	(15)	6006	5053	4448875
235	34.8	4.3	5.3	chrX	63424778	63425059	(92615836)	C	L1M1	LINE/L1	(5854)	1642	1364	4450150
3977	10.1	2.5	9.2	chrX	63474742	63475459	(92565436)	+	LTR76	LTR/ERV1	7	675	(0)	4450189
3343	13.5	0.2	0.2	chrX	63475461	63475980	(92564915)	C	Tigger1	DNA/TcMar-Tigger	(326)	2092	1573	4450188
192	33.2	7.3	10.4	chrX	72051697	72052022	(83988873)	+	L2c	LINE/L2	2932	3246	(141)	4462602
4133	6.5	0.2	0.0	chrX	73318321	73318832	(82722063)	C	MER9a1	LTR/ERVK	(0)	513	1	4464396
24122	5.8	4.5	0.6	chrX	73318833	73323801	(82717094)	C	HERVK9-int	LTR/ERVK	(0)	6021	801	4464396
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
11534	22.1	7.8	7.7	chrX	75326408	75329359	(80711536)	+	HERVK9-int	LTR/ERVK	3062	6020	(1)	4466634
3943	4.8	2.2	0.2	chrX	75329361	75329861	(80711034)	+	MER9a3	LTR/ERVK	2	512	(0)	4466634
4440	6.6	0.0	0.4	chrX	77081413	77081927	(78958968)	+	MER9a2	LTR/ERVK	1	513	(0)	4467998
899	18.3	5.8	0.2	chrX	95629758	95629967	(60410928)	+	HERV35I-int	LTR/ERV1	4111	4311	(569)	4488146
3127	16.9	6.0	1.1	chrX	95629968	95630682	(60410213)	+	HERV35I-int	LTR/ERV1	3551	4929	(2259)	4488146
456	31.1	6.1	11.7	chrX	104652604	104653073	(51387822)	C	LTR78B	LTR/ERV1	(4)	1292	851	4500501
5232	15.9	6.7	1.2	chrX	107059900	107060274	(48980621)	+	L1MC4a	LINE/L1	6738	7152	(730)	4503594
454	31.2	13.7	3.8	chrX	110222603	110223055	(45817840)	C	Charlie30a	DNA/hAT-Charlie	(219)	572	68	4508101
296	28.4	1.6	1.2	chrX	124341692	124341796	(31699099)	C	L2c	LINE/L2	(26)	3400	3270	4528521
804	22.4	5.7	3.2	chrX	124347539	124347759	(31693136)	+	MIRb	SINE/MIR	34	260	(8)	4528528
518	31.8	12.0	3.7	chrX	153406704	153407108	(2633787)	C	L2	LINE/L2	(587)	2832	2390	4570227