2198	11.0	0.7	1.3	chr1	1016061	1016360	(247940062)	C	AluSx1	SINE/Alu	(14)	298	1	1282
13	18.8	4.5	2.2	chr1	1116008	1116051	(247840371)	+	(CCCCAGC)n	Simple_repeat	1	46	(0)	1381
64	6.2	1.1	1.1	chr1	4302984	4303071	(244653351)	+	(GTTCC)n	Simple_repeat	1	89	(0)	5122
140	18.5	0.7	0.0	chr1	4303072	4303312	(244653110)	+	(TTCCA)n	Simple_repeat	2	242	(0)	5123
611	24.7	6.6	4.5	chr1	12472117	12472294	(236484128)	C	HAL1	LINE/L1	(1584)	923	742	19840
455	29.1	13.1	5.7	chr1	12472327	12472698	(236483724)	C	HAL1	LINE/L1	(2082)	425	22	19840
4412	5.1	0.0	0.4	chr1	16102814	16103328	(232853094)	C	MER9a2	LTR/ERVK	(0)	513	1	26705
14620	5.1	1.3	0.7	chr1	16103329	16105518	(232850904)	C	HERVK9-int	LTR/ERVK	(0)	6021	3720	26705
2738	11.0	0.3	0.0	chr1	18980162	18980534	(229975888)	+	THE1C	LTR/ERVL-MaLR	1	374	(1)	32835
1211	25.2	12.2	4.0	chr1	18980535	18980628	(229975794)	+	L2	LINE/L2	1793	1871	(1548)	32834
835	23.9	2.6	1.4	chr1	18980629	18980916	(229975506)	+	L1MEd	LINE/L1	885	1179	(5924)	32836
24634	5.5	1.4	0.2	chr1	20000001	20003214	(228953208)	+	HERVK9-int	LTR/ERVK	2768	6021	(0)	34916
4212	6.7	0.0	0.0	chr1	20003219	20003727	(228952695)	+	MER9a2	LTR/ERVK	5	513	(0)	34916
207	28.3	1.6	1.6	chr1	26826394	26826454	(222129968)	+	L2a	LINE/L2	3346	3406	(20)	50247
24	18.7	5.3	2.5	chr1	26826609	26826684	(222129738)	+	(GGC)n	Simple_repeat	1	80	(0)	50248
403	6.7	0.0	0.0	chr1	31431749	31432232	(217524190)	+	(GATAGGGTG)n	Simple_repeat	1	484	(0)	60677
282	29.4	11.4	2.4	chr1	44870247	44870413	(204086009)	+	L2	LINE/L2	2348	2531	(888)	86882
405	33.6	11.0	8.9	chr1	44870414	44870656	(204085766)	+	L2b	LINE/L2	2088	2313	(1106)	86883
2214	11.3	1.0	0.0	chr1	44870657	44870947	(204085475)	C	AluSg	SINE/Alu	(16)	294	1	86884
4404	3.9	0.0	1.2	chr1	48513245	48513763	(200442659)	C	MER9a1	LTR/ERVK	(0)	513	1	93433
50171	5.2	0.7	0.1	chr1	48513764	48519743	(200436679)	C	HERVK9-int	LTR/ERVK	(0)	6021	1	93433
4575	10.1	10.6	1.4	chr1	51177918	51178610	(197777812)	+	LTR12D	LTR/ERV1	368	1131	(123)	98089
262	29.7	3.8	0.0	chr1	52695655	52695755	(196260667)	C	L2a	LINE/L2	(611)	2808	2704	101481
182	33.8	0.0	0.0	chr1	52695894	52695964	(196260458)	+	L2a	LINE/L2	2855	2925	(494)	101487
12	16.9	2.9	2.8	chr1	52843544	52843583	(196112839)	+	(GTCCC)n	Simple_repeat	1	40	(0)	101893
2536	6.8	0.3	0.0	chr1	52843676	52843985	(196112437)	C	AluSx3	SINE/Alu	(0)	311	1	101894
207	29.2	9.1	3.2	chr1	53415024	53415147	(195541275)	C	L2a	LINE/L2	(652)	2767	2636	103053
364	31.7	5.3	0.0	chr1	55315993	55316134	(193640288)	+	MIRb	SINE/MIR	26	175	(93)	106855
2326	9.7	0.3	0.0	chr1	55316174	55316471	(193639951)	C	AluSx	SINE/Alu	(13)	299	1	106856
9767	12.2	4.3	0.1	chr1	79923391	79924842	(169031580)	+	THE1C-int	LTR/ERVL-MaLR	1	1515	(65)	146498
648	33.1	12.3	3.1	chr1	85122986	85123858	(163832564)	+	L2a	LINE/L2	2455	3426	(0)	153650
13331	5.4	0.1	0.4	chr1	94448659	94450303	(154506119)	+	HERVK9-int	LTR/ERVK	4381	6021	(0)	167807
3923	3.3	5.5	0.4	chr1	94450304	94450789	(154505633)	+	MER9a3	LTR/ERVK	1	512	(0)	167807
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
973	24.9	7.2	1.3	chr1	155160055	155160401	(93796021)	C	L2a	LINE/L2	(160)	3266	2898	227480
202	32.4	7.1	7.1	chr1	155160402	155160514	(93795908)	+	MIR	SINE/MIR	2	114	(148)	227482
263	7.5	0.0	2.4	chr1	155160550	155160590	(93795832)	C	MLT2D	LTR/ERVL	(0)	560	521	227483
2268	10.7	0.0	2.5	chr1	160861549	160861867	(88094555)	+	AluSx	SINE/Alu	1	311	(1)	236386
16	6.8	6.5	0.0	chr1	160861870	160861900	(88094522)	+	(AATTA)n	Simple_repeat	1	33	(0)	236387
334	27.3	2.4	4.0	chr1	164596114	164596239	(84360183)	+	MamRep1151	LTR?	586	709	(0)	242371
293	26.9	0.9	5.3	chr1	164596316	164596429	(84359993)	+	MER102b	DNA/hAT-Charlie	230	338	(3)	242372
418	12.0	3.9	1.3	chr1	164596442	164596517	(84359905)	+	MER20	DNA/hAT-Charlie	1	78	(141)	242373
14	33.3	1.4	1.4	chr1	176207201	176207269	(72749153)	+	(CCG)n	Simple_repeat	1	70	(0)	259874
15	20.5	5.1	0.0	chr1	176207252	176207310	(72749112)	+	(GC)n	Simple_repeat	1	62	(0)	259875
3966	5.3	5.3	0.2	chr1	178554076	178554562	(70401860)	C	MER9a2	LTR/ERVK	(0)	513	1	263261
33775	5.0	1.6	0.3	chr1	178554563	178559396	(70397026)	C	HERVK9-int	LTR/ERVK	(0)	6021	1125	263261
10573	18.3	4.8	2.5	chr1	205877886	205880135	(43076287)	C	L1PB4	LINE/L1	(3762)	3800	1502	304226
1271	21.3	1.6	0.4	chr1	205880157	205880411	(43076011)	C	L1PB4	LINE/L1	(6582)	984	727	304226
10900	6.3	0.5	0.3	chr1	205894217	205895642	(43060780)	+	HERVK9-int	LTR/ERVK	4594	6021	(0)	304233
4125	6.7	0.4	1.4	chr1	205895643	205896160	(43060262)	+	MER9a2	LTR/ERVK	1	513	(0)	304233
4268	2.6	0.0	0.0	chr1	213025489	213025992	(35930430)	C	MER9a1	LTR/ERVK	(9)	504	1	315597
43986	4.8	2.5	1.2	chr1	213025993	213031102	(35925320)	C	HERVK9-int	LTR/ERVK	(0)	6021	786	315597
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
12	24.1	0.0	0.0	chr1	236755092	236755125	(12201297)	+	(ACA)n	Simple_repeat	1	34	(0)	352198
1055	20.6	9.2	8.7	chr1	243122833	243123167	(5833255)	+	MER87B	LTR/ERV1	2	338	(171)	362121
18	0.0	0.0	0.0	chr1	243123171	243123190	(5833232)	+	(A)n	Simple_repeat	1	20	(0)	362122
19582	4.2	0.2	0.2	chr1	247027364	247029662	(1926760)	+	HERVK9-int	LTR/ERVK	3723	6021	(0)	368554
4320	5.3	0.2	0.0	chr1	247029663	247030174	(1926248)	+	MER9a1	LTR/ERVK	1	513	(0)	368554
311	34.9	5.0	8.2	chr10	12424122	12424661	(121372761)	+	L2c	LINE/L2	2331	2852	(567)	388907
2176	11.7	0.3	0.3	chr10	21389157	21389464	(112407958)	+	AluJb	SINE/Alu	1	308	(4)	403581
202	34.7	1.4	1.4	chr10	22972436	22972508	(110824914)	+	MIR3	SINE/MIR	130	202	(6)	406067
370	35.1	9.9	4.6	chr10	22972507	22972963	(110824459)	C	X6A_LINE	LINE/CR1	(217)	863	380	406068
35955	17.0	2.0	1.6	chr10	42487021	42494108	(91303314)	+	HERVK9-int	LTR/ERVK	1	7369	(65)	432150
3803	9.5	1.0	0.0	chr10	42494109	42494602	(91302820)	+	MER9B	LTR/ERVK	1	499	(0)	432150
12646	6.7	1.6	0.7	chr10	42500001	42501709	(91295713)	+	HERVK9-int	LTR/ERVK	4297	6021	(0)	432154
4141	6.8	0.0	0.0	chr10	42501710	42502222	(91295200)	+	MER9a1	LTR/ERVK	1	513	(0)	432154
3986	8.0	0.4	0.8	chr10	42506072	42506586	(91290836)	C	MER9a2	LTR/ERVK	(0)	513	1	432160
10482	8.0	0.1	0.8	chr10	42506587	42508036	(91289386)	C	HERVK9-int	LTR/ERVK	(0)	6021	4582	432160
841	22.6	10.0	0.0	chr10	52301652	52301850	(81495572)	+	MER58A	DNA/hAT-Charlie	4	224	(0)	446089
57	29.1	0.0	0.7	chr10	52302101	52302246	(81495176)	+	(AT)n	Simple_repeat	1	146	(0)	446090
3921	6.9	1.2	1.7	chr10	53335597	53336112	(80461310)	C	MER9a2	LTR/ERVK	(0)	513	1	447449
18801	5.6	0.2	0.1	chr10	53336113	53338410	(80459012)	C	HERVK9-int	LTR/ERVK	(0)	6021	3723	447449
3897	5.3	4.7	0.2	chr10	53485154	53485643	(80311779)	C	MER9a1	LTR/ERVK	(0)	513	1	447668
3035	5.8	0.0	0.3	chr10	53485644	53486023	(80311399)	C	HERVK9-int	LTR/ERVK	(0)	6021	5643	447668
55	22.6	2.5	5.5	chr10	61139287	61139483	(72657939)	+	(TTCT)n	Simple_repeat	1	202	(0)	458142
1180	25.1	11.2	1.0	chr10	67927809	67928218	(65869204)	C	L2a	LINE/L2	(40)	3386	2930	468213
365	29.0	0.7	4.0	chr10	67928264	67928414	(65869008)	C	HAL1	LINE/L1	(1749)	758	613	468214
467	31.8	6.0	7.0	chr10	67928483	67928640	(65868782)	C	HAL1	LINE/L1	(2109)	398	240	468214
2278	9.3	0.7	0.7	chr10	67928641	67928931	(65868491)	+	AluSx4	SINE/Alu	1	291	(19)	468215
2909	13.9	5.4	0.0	chr10	68861092	68861545	(64935877)	C	MER9a3	LTR/ERVK	(0)	512	33	470317
3951	20.4	3.0	2.6	chr10	68861553	68863367	(64934055)	C	HERVK9-int	LTR/ERVK	(77)	7357	5054	470317
2181	14.7	0.0	0.3	chr10	72049207	72049518	(61747904)	+	AluJr4	SINE/Alu	2	312	(0)	476436
263	26.1	4.2	12.0	chr10	72049519	72049560	(61747862)	+	MLT1C	LTR/ERVL-MaLR	185	226	(164)	476435
13	12.6	0.0	3.6	chr10	72049563	72049590	(61747832)	+	GA-rich	Low_complexity	1	28	(0)	476437
1129	24.5	2.5	0.4	chr10	72049592	72049865	(61747557)	+	MLT1C	LTR/ERVL-MaLR	186	465	(2)	476435
290	21.7	19.1	0.0	chr10	72049888	72049993	(61747429)	C	L3	LINE/CR1	(76)	4023	3893	476438
2305	8.4	2.7	0.0	chr10	110231976	110232259	(23565163)	C	AluY	SINE/Alu	(19)	292	1	539149
419	37.1	5.4	9.8	chr10	110232281	110232668	(23564754)	+	L2b	LINE/L2	2986	3355	(20)	539148
2488	17.4	6.0	9.4	chr10	119462672	119463178	(14334244)	C	MER92B	LTR/ERV1	(1)	635	127	553925
2768	7.8	1.9	0.6	chr10	119463179	119463537	(14333885)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	553926
49997	4.6	1.3	0.3	chr10	130291323	130297285	(3500137)	+	HERVK9-int	LTR/ERVK	1	6021	(0)	569357
4094	4.6	3.1	1.6	chr10	130297286	130297789	(3499633)	+	MER9a3	LTR/ERVK	1	512	(0)	569357
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
13	28.7	0.0	0.0	chr11	1017643	1017684	(134068938)	+	(TGG)n	Simple_repeat	1	42	(0)	574242
2025	26.9	7.9	8.0	chr11	1332162	1332739	(133753883)	+	L1ME1	LINE/L1	5541	6120	(232)	574481
2520	9.4	7.7	3.7	chr11	1332740	1333148	(133753474)	C	MSTA	LTR/ERVL-MaLR	(1)	427	1	574487
1069	23.6	13.1	5.9	chr11	70371122	70371431	(64715191)	C	L1MD	LINE/L1	(3227)	2919	2548	676745
616	22.2	3.5	4.0	chr11	70371541	70371742	(64714880)	C	L1M4	LINE/L1	(3463)	2683	2483	676741
2365	8.5	0.0	0.7	chr11	76353727	76354020	(58732602)	+	AluSx4	SINE/Alu	1	292	(18)	687842
17	0.0	0.0	0.0	chr11	78416780	78416798	(56669824)	+	(A)n	Simple_repeat	1	19	(0)	691987
12	23.5	0.0	0.0	chr11	78417107	78417141	(56669481)	+	(TGACGC)n	Simple_repeat	1	35	(0)	691988
23	28.2	0.0	0.0	chr11	92886329	92886388	(42200234)	+	(GT)n	Simple_repeat	1	60	(0)	714799
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
18300	3.7	0.3	0.1	chr11	94238529	94241278	(40845344)	C	L1PA4	LINE/L1	(372)	5782	3028	716863
1472	20.7	11.7	0.6	chr11	110307765	110308099	(24778523)	+	MLT1A1	LTR/ERVL-MaLR	1	377	(31)	739607
1895	19.4	7.7	1.5	chr11	110308106	110308508	(24778114)	+	MLT1F1	LTR/ERVL-MaLR	140	569	(0)	739606
6398	23.3	8.0	3.6	chr11	120380165	120382246	(14704376)	C	L1MC3	LINE/L1	(10)	7775	5595	756470
548	2.3	1.2	1.4	chr12	10001	10585	(133264724)	+	(CTAACC)n	Simple_repeat	1	592	(0)	778084
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
237	37.0	2.8	1.4	chr12	17097913	17098052	(116177257)	C	MLT1J-int	LTR/ERVL-MaLR	(876)	511	370	805100
674	24.2	13.1	2.3	chr12	25097755	25098012	(108177297)	C	HAL1	LINE/L1	(0)	2507	2218	815961
4516	27.1	10.2	3.2	chr12	25098013	25099713	(108175596)	+	L2	LINE/L2	1073	2907	(512)	815962
1516	26.6	7.2	1.4	chr12	33756284	33756791	(99518518)	C	L1MC4	LINE/L1	(258)	7784	7245	829429
4419	6.8	0.2	0.0	chr12	47443339	47443849	(85831460)	C	MER9a2	LTR/ERVK	(1)	512	1	843719
17901	5.4	0.6	0.1	chr12	47443850	47446136	(85829173)	C	HERVK9-int	LTR/ERVK	(0)	6021	3723	843719
4490	3.6	2.3	0.0	chr12	50491884	50492384	(82782925)	C	MER9a1	LTR/ERVK	(0)	513	1	849361
50260	4.5	1.4	0.1	chr12	50492385	50498326	(82776983)	C	HERVK9-int	LTR/ERVK	(0)	6021	1	849361
16655	16.2	2.4	3.4	chr12	56833052	56834575	(76440734)	C	MER50-int	LTR/ERV1	(2239)	4966	3458	860347
2140	12.3	0.0	3.5	chr12	57377806	57378122	(75897187)	+	AluSz	SINE/Alu	1	306	(6)	861162
266	30.1	7.9	5.1	chr12	57378123	57378217	(75897092)	+	MIRb	SINE/MIR	165	268	(0)	861161
1838	15.9	2.7	0.3	chr12	57378384	57378672	(75896637)	C	AluJb	SINE/Alu	(16)	296	1	861163
394	28.8	5.6	9.5	chr12	65528835	65528943	(67746366)	C	MIR	SINE/MIR	(111)	151	31	872920
4189	5.7	0.6	0.2	chr12	105302834	105303344	(27971965)	C	MER9a1	LTR/ERVK	(0)	513	1	934142
34641	4.6	1.5	0.0	chr12	105303345	105308170	(27967139)	C	HERVK9-int	LTR/ERVK	(0)	6021	1125	934142
4449	16.7	3.3	2.0	chr12	108662806	108663862	(24611447)	+	L1MB7	LINE/L1	5119	6184	(0)	940761
14	25.2	3.5	1.7	chr12	121803593	121803650	(11471659)	+	(CCCCCGG)n	Simple_repeat	1	60	(0)	970352
1577	13.9	0.0	3.3	chr12	130026165	130026408	(3248901)	C	AluJb	SINE/Alu	(13)	299	64	986041
233	20.0	0.0	3.2	chr12	132868873	132868934	(406375)	+	L1MB8	LINE/L1	5971	6030	(148)	990069
241	17.0	0.0	3.6	chr12	132868951	132869005	(406304)	+	L1MB8	LINE/L1	5971	6023	(155)	990069
248	18.3	0.0	3.2	chr12	132868990	132869051	(406258)	+	L1MB8	LINE/L1	5971	6030	(148)	990069
233	20.0	0.0	3.2	chr12	132869029	132869090	(406219)	+	L1MB8	LINE/L1	5971	6030	(148)	990069
233	20.0	0.0	3.2	chr12	132869068	132869129	(406180)	+	L1MB8	LINE/L1	5971	6030	(148)	990069
233	20.0	0.0	3.2	chr12	132869107	132869168	(406141)	+	L1MB8	LINE/L1	5971	6030	(148)	990069
11511	4.6	2.5	0.9	chr13	19629295	19630711	(94733617)	+	HERVK9-int	LTR/ERVK	4582	6021	(0)	992728
4406	4.3	0.0	1.2	chr13	19630712	19631230	(94733098)	+	MER9a2	LTR/ERVK	1	513	(0)	992728
3391	12.9	4.2	2.3	chr13	29559537	29559720	(84804608)	C	Tigger3b	DNA/TcMar-Tigger	(347)	884	704	1008303
2599	4.1	0.0	0.0	chr13	29559721	29560012	(84804316)	C	AluY	SINE/Alu	(17)	294	3	1008304
5050	12.2	3.8	3.8	chr13	62115189	62116025	(52248303)	+	LTR1A2	LTR/ERV1	1	837	(0)	1055598
2768	17.7	14.2	7.5	chr13	64879796	64880504	(49483824)	C	LTR1	LTR/ERV1	(18)	765	1	1059088
2268	7.8	0.0	1.1	chr13	65209293	65209601	(49154727)	C	AluY	SINE/Alu	(0)	311	1	1059492
1718	16.1	15.7	0.6	chr13	65209643	65210005	(49154323)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1059493
5126	16.6	1.5	1.1	chr13	65383041	65384413	(48979915)	C	L1PA15	LINE/L1	(3734)	2939	1431	1059738
857	26.8	2.6	1.3	chr13	65384411	65384637	(48979691)	C	L1PA15	LINE/L1	(6060)	633	404	1059738
476	19.5	0.0	0.0	chr13	65829317	65829403	(48534925)	+	MER52D	LTR/ERV1	1	87	(1668)	1060266
4756	23.3	11.2	4.2	chr13	65829403	65830815	(48533513)	+	MER52D	LTR/ERV1	601	2123	(0)	1060266
1428	26.9	9.9	1.2	chr13	72567174	72567587	(41796741)	C	LFSINE_Vert	SINE/tRNA	(2)	457	4	1068969
4622	13.9	1.2	2.2	chr13	75457820	75458599	(38905729)	C	LTR1F	LTR/ERV1	(0)	772	1	1073370
35931	6.4	0.6	0.5	chr13	84873737	84876707	(29487621)	+	HERVK14C-int	LTR/ERVK	4378	7434	(0)	1085796
803	21.7	1.1	4.5	chr13	84876708	84876736	(29487592)	C	MER4-int	LTR/ERV1	(2885)	5235	5214	1085798
4719	5.3	0.7	0.2	chr13	84876737	84877320	(29487008)	+	LTR14C	LTR/ERVK	1	587	(0)	1085799
196	35.3	4.7	3.8	chr13	97259675	97259780	(17104548)	C	MIR3	SINE/MIR	(1)	207	101	1102725
1291	29.2	13.9	2.4	chr13	98786736	98787209	(15577119)	+	L2	LINE/L2	1455	2008	(1411)	1105233
2028	10.9	5.8	5.3	chr13	98787210	98787588	(15576740)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1105234
20398	9.0	2.9	2.4	chr14	21005507	21006081	(86037637)	+	PABL_A-int	LTR/ERV1	1863	2438	(2577)	1128947
617	5.6	0.0	0.0	chr14	21006082	21006153	(86037565)	+	AluYj4	SINE/Alu	235	306	(5)	1128948
20398	9.0	2.9	2.4	chr14	21006154	21006269	(86037449)	+	PABL_A-int	LTR/ERV1	2439	2556	(2459)	1128947
299	36.0	8.8	4.0	chr14	26697504	26697827	(80345891)	C	L2	LINE/L2	(1414)	2005	1665	1137123
3788	8.4	0.4	3.6	chr14	42307103	42307631	(64736087)	C	MER9a3	LTR/ERVK	(0)	512	1	1159158
28396	12.4	2.6	2.3	chr14	42307632	42309752	(64733966)	C	HERVK9-int	LTR/ERVK	(2089)	6027	3856	1159158
32419	5.6	0.8	0.1	chr14	52168473	52172109	(54871609)	+	HERVK9-int	LTR/ERVK	2357	6021	(0)	1172536
3165	9.4	4.2	0.0	chr14	52172122	52172577	(54871141)	+	MER9a3	LTR/ERVK	37	512	(0)	1172538
1938	17.5	8.8	4.6	chr14	54438729	54439141	(52604577)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	1175929
14	4.3	4.2	0.0	chr14	56118335	56118358	(50925360)	+	(CTCC)n	Simple_repeat	1	25	(0)	1178822
31	15.8	2.7	2.6	chr14	56118584	56118657	(50925061)	+	(GCG)n	Simple_repeat	1	76	(0)	1178823
3029	11.8	0.2	0.0	chr14	65570743	65571173	(41472545)	+	MER57A1	LTR/ERV1	1	432	(0)	1193387
396	32.7	8.0	1.2	chr14	70046399	70046589	(36997129)	+	MIR3	SINE/MIR	6	196	(34)	1200593
190	22.9	0.0	15.7	chr14	70046722	70046804	(36996914)	C	L2b	LINE/L2	(3)	3372	3303	1200594
413	31.1	7.5	0.7	chr14	70046931	70047066	(36996652)	C	MIR3	SINE/MIR	(12)	196	51	1200595
226	23.7	5.0	0.0	chr14	96146500	96146575	(10897143)	C	MamGypsy2-LTR	LTR/Gypsy	(71)	112	33	1244326
1370	23.9	3.1	9.8	chr14	96146769	96146946	(10896772)	C	L1PBa	LINE/L1	(3503)	3356	3168	1244327
252	29.3	2.4	0.0	chr14	96213772	96213853	(10829865)	C	MIRb	SINE/MIR	(70)	198	115	1244457
252	35.8	5.6	0.0	chr14	96214396	96214546	(10829172)	C	MIRb	SINE/MIR	(50)	218	59	1244458
11149	6.6	0.0	0.3	chr14	103237523	103238967	(3804751)	+	HERVK9-int	LTR/ERVK	4582	6021	(0)	1256407
4329	5.1	0.2	1.2	chr14	103238968	103239485	(3804233)	+	MER9a2	LTR/ERVK	1	513	(0)	1256407
413	19.4	1.0	2.0	chr15	23549517	23549616	(78441573)	+	MER107	DNA/hAT-Charlie	66	164	(36)	1267604
20	21.0	0.0	0.0	chr15	23549670	23549714	(78441475)	+	(TGAC)n	Simple_repeat	1	45	(0)	1267605
1349	19.2	10.9	0.4	chr15	23549715	23549959	(78441230)	C	AluJr	SINE/Alu	(34)	278	5	1267606
4820	6.7	0.2	0.0	chr15	45234478	45235063	(56756126)	C	LTR14C	LTR/ERVK	(0)	587	1	1300294
63138	4.2	0.4	0.2	chr15	45235064	45242440	(56748749)	C	HERVK14C-int	LTR/ERVK	(0)	7434	47	1300294
435	11.1	0.0	0.0	chr15	62211848	62211910	(39779279)	+	MER4B-int	LTR/ERV1	4675	4737	(2021)	1326528
389	14.8	12.0	3.6	chr15	62211914	62211997	(39779192)	C	LTR14A	LTR/ERVK	(209)	399	308	1326530
584	7.1	0.0	27.3	chr15	62211971	62212124	(39779065)	C	LTR14A	LTR/ERVK	(232)	112	1	1326530
1010	29.1	1.2	0.9	chr15	62212137	62212458	(39778731)	C	HERVK14-int	LTR/ERVK	(25)	7409	7087	1326530
69	0.0	0.0	0.0	chr15	73373718	73373778	(28617411)	+	(AGAA)n	Simple_repeat	1	61	(0)	1347021
17	10.8	0.0	0.0	chr15	90042493	90042522	(11948667)	+	(TCAA)n	Simple_repeat	1	30	(0)	1375483
385	26.4	14.4	1.3	chr15	98232164	98232320	(3758869)	+	MIRb	SINE/MIR	45	225	(43)	1388304
480	27.4	11.1	7.1	chr15	98232751	98233060	(3758129)	+	MER102c	DNA/hAT-Charlie	4	327	(4)	1388305
4146	7.2	0.6	0.0	chr16	3076839	3077348	(87260997)	C	MER9a2	LTR/ERVK	(0)	513	1	1398454
10213	6.0	0.8	0.6	chr16	3077353	3078786	(87259559)	C	HERVK9-int	LTR/ERVK	(3)	6018	4582	1398454
2512	18.6	5.7	1.2	chr16	3149106	3149611	(87188734)	C	LTR53B	LTR/ERVL	(0)	533	4	1398594
3175	7.3	6.6	0.0	chr16	10417952	10418417	(79919928)	C	MER9a3	LTR/ERVK	(13)	499	1	1413457
6515	4.6	0.5	0.2	chr16	10418418	10419244	(79919101)	C	HERVK9-int	LTR/ERVK	(0)	6021	5193	1413457
224	27.1	6.1	3.6	chr16	11345958	11346068	(78992277)	+	MER5A	DNA/hAT-Charlie	37	150	(39)	1415476
373	30.2	8.6	0.0	chr16	11346105	11346253	(78992092)	+	L2b	LINE/L2	3088	3250	(125)	1415477
2285	9.2	0.0	0.3	chr16	11346256	11346560	(78991785)	C	AluSz6	SINE/Alu	(8)	304	1	1415478
218	28.0	12.7	0.0	chr16	25759958	25760081	(64578264)	C	MIRc	SINE/MIR	(85)	183	24	1447651
56	1.9	0.0	0.0	chr16	25760102	25760156	(64578189)	+	(CCCTAA)n	Simple_repeat	1	55	(0)	1447654
1878	15.6	1.1	6.7	chr16	25760191	25760423	(64577922)	C	MLT1B	LTR/ERVL-MaLR	(40)	350	123	1447655
4375	6.7	0.0	0.2	chr16	31542351	31542892	(58795453)	+	HERVK9-int	LTR/ERVK	5481	6021	(0)	1460535
3856	7.9	1.2	0.4	chr16	31542893	31543400	(58794945)	+	MER9a3	LTR/ERVK	1	512	(0)	1460535
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
888	6.7	4.2	0.7	chr16	33340034	33340155	(56998190)	C	LTR13A	LTR/ERVK	(840)	126	1	1462584
330	24.4	1.2	2.4	chr16	34071698	34071779	(56266566)	+	AluJb	SINE/Alu	208	288	(24)	1463578
376	15.6	3.0	0.0	chr16	34097527	34097590	(56240755)	C	AluJo	SINE/Alu	(22)	290	225	1463604
791	25.2	2.2	0.9	chr16	51434933	51435156	(38903189)	C	MIR	SINE/MIR	(11)	251	25	1474358
187	24.7	19.0	0.0	chr16	51730062	51730142	(38608203)	C	MIR	SINE/MIR	(7)	255	156	1474871
2502	10.9	5.3	1.4	chr16	51730165	51730583	(38607762)	C	LTR56	LTR/ERV1	(0)	445	10	1474872
304	40.1	0.6	0.6	chr16	51730585	51730742	(38607603)	C	MIR	SINE/MIR	(102)	160	3	1474873
2192	12.1	0.0	2.3	chr16	53159610	53159916	(37178429)	C	AluSx	SINE/Alu	(12)	300	1	1477373
214	30.4	8.9	1.1	chr16	62171823	62171915	(28166430)	+	MIRc	SINE/MIR	118	218	(50)	1492998
4074	6.5	0.8	1.9	chr16	74912580	74913097	(15425248)	C	MER9a3	LTR/ERVK	(0)	512	1	1515696
995	4.3	0.0	0.8	chr16	74913098	74913215	(15425130)	C	HERVK9-int	LTR/ERVK	(0)	6021	5905	1515696
344	7.1	0.0	0.0	chr16	74913216	74913257	(15425088)	C	MER9a2	LTR/ERVK	(471)	42	1	1515697
1834	11.0	2.4	10.3	chr16	74913265	74913583	(15424762)	C	AluSz	SINE/Alu	(12)	300	8	1515698
2240	13.2	11.5	0.8	chr17	2462455	2462835	(80794606)	+	MSTA	LTR/ERVL-MaLR	2	428	(0)	1549155
2634	17.2	5.9	1.7	chr17	2462836	2462871	(80794570)	+	L1MB2	LINE/L1	6127	6163	(8)	1549154
2279	11.5	0.0	0.3	chr17	8325514	8325825	(74931616)	+	AluSq2	SINE/Alu	1	311	(2)	1560562
1803	16.2	3.0	8.4	chr17	8325826	8326183	(74931258)	C	LTR56	LTR/ERV1	(44)	401	61	1560561
5424	25.1	5.5	4.8	chr17	12100048	12103024	(71154417)	C	L1ME1	LINE/L1	(2)	6177	3177	1567547
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
1545	18.6	0.5	0.9	chr17	26938538	26939277	(56318164)	+	(GAATG)n	Satellite	3	736	(0)	1585994
437	12.7	3.1	0.0	chr17	26939289	26939351	(56318090)	+	AluSz6	SINE/Alu	225	289	(23)	1585995
1545	18.6	0.5	0.9	chr17	26939351	26939821	(56317620)	+	(GAATG)n	Satellite	4	474	(0)	1585996
2404	23.6	2.0	2.1	chr17	27701234	27702152	(55555289)	+	HERVK9-int	LTR/ERVK	5682	7337	(97)	1587251
2796	15.0	5.4	0.0	chr17	27702160	27702611	(55554830)	+	MER9a3	LTR/ERVK	33	510	(2)	1587251
25035	6.4	3.0	0.1	chr17	31634266	31638526	(51618915)	+	HERVK9-int	LTR/ERVK	1637	6021	(0)	1594984
3926	5.9	3.7	0.0	chr17	31638527	31639019	(51618422)	+	MER9a3	LTR/ERVK	1	512	(0)	1594984
946	19.1	2.3	0.0	chr17	46609824	46609991	(36647450)	C	AluJb	SINE/Alu	(10)	302	131	1624413
90	10.2	0.0	2.7	chr17	46609994	46610141	(36647300)	+	(TTTC)n	Simple_repeat	1	148	(0)	1624414
1118	26.2	6.9	1.9	chr17	68648460	68648649	(14608792)	+	L1ME3B	LINE/L1	2862	3062	(3084)	1664575
2011	12.8	6.0	1.1	chr17	68648650	68649011	(14608430)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1664576
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
825	32.2	5.4	0.6	chr18	35401988	35402306	(44970979)	C	LTR16A	LTR/ERVL	(7)	444	110	1733268
707	24.8	6.0	4.7	chr18	35402354	35402565	(44970720)	C	BLACKJACK	DNA/hAT-Blackjack	(2738)	231	17	1733269
28122	17.0	7.8	7.8	chr18	52790112	52792754	(27580531)	C	HUERS-P3b-int	LTR/ERV1	(7)	2901	90	1758952
78	6.2	1.0	0.9	chr18	52792755	52792858	(27580427)	+	(ATTCC)n	Simple_repeat	1	105	(0)	1758954
28122	17.0	7.8	7.8	chr18	52792859	52792933	(27580352)	C	HUERS-P3b-int	LTR/ERV1	(7329)	89	25	1758952
976	28.8	14.8	3.8	chr18	57773613	57774315	(22598970)	+	L2a	LINE/L2	2434	3277	(149)	1766148
2133	11.8	0.7	0.7	chr18	57774316	57774611	(22598674)	+	AluSx	SINE/Alu	1	296	(16)	1766149
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
547	24.9	2.8	6.8	chr19	2579780	2579969	(56037647)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	286	1801151
3966	21.7	4.9	3.3	chr19	9459995	9462119	(49155497)	+	HERVK9-int	LTR/ERVK	5193	7337	(97)	1817462
2895	13.8	6.5	0.0	chr19	9462120	9462598	(49155018)	+	MER9a3	LTR/ERVK	1	512	(0)	1817462
4303	6.0	0.0	0.0	chr19	9711509	9712021	(48905595)	C	MER9a1	LTR/ERVK	(0)	513	1	1817972
40634	5.7	0.1	0.1	chr19	9712022	9716915	(48900701)	C	HERVK9-int	LTR/ERVK	(0)	6021	1126	1817972
511	25.4	0.0	0.9	chr19	11239994	11240108	(47377508)	C	MER81	DNA/hAT-Blackjack	(0)	114	1	1821793
342	33.4	5.1	6.0	chr19	11240356	11240579	(47377037)	+	MIR	SINE/MIR	30	248	(14)	1821794
4324	5.5	0.0	0.6	chr19	12098326	12098841	(46518775)	C	MER9a1	LTR/ERVK	(0)	513	1	1823779
15966	5.4	6.5	0.1	chr19	12098842	12101000	(46516616)	C	HERVK9-int	LTR/ERVK	(0)	6021	3723	1823779
291	27.7	4.7	2.9	chr19	15998448	15998551	(42619065)	+	L2b	LINE/L2	3096	3201	(174)	1832919
4047	5.5	0.0	0.0	chr19	21338382	21338889	(37278727)	C	MER9a1	LTR/ERVK	(5)	508	1	1843876
39487	5.8	2.5	0.5	chr19	21338890	21344287	(37273329)	C	HERVK9-int	LTR/ERVK	(0)	6021	513	1843876
3945	7.8	2.3	1.8	chr19	23572700	23573086	(35044530)	C	MER9a2	LTR/ERVK	(117)	396	1	1846873
11324	5.2	2.6	0.4	chr19	23573087	23574482	(35043134)	C	HERVK9-int	LTR/ERVK	(0)	6021	4594	1846873
12739	0.5	0.0	2.1	chr19	36270447	36272042	(22345574)	+	SST1	Satellite/centr	1	1563	(0)	1862253
24	29.7	0.0	2.5	chr19	36272043	36272123	(22345493)	+	(GT)n	Simple_repeat	1	81	(0)	1862254
26	23.7	3.8	3.6	chr19	36272113	36272129	(22345487)	+	(CTGTCT)n	Simple_repeat	1	66	(44)	1862255
36	20.5	1.2	1.2	chr19	36272130	36272209	(22345407)	+	(TC)n	Simple_repeat	1	81	(0)	1862256
26	23.7	3.8	3.6	chr19	36272210	36272218	(22345398)	+	(CTGTCT)n	Simple_repeat	67	110	(0)	1862255
4169	5.9	0.6	0.2	chr19	38935164	38935673	(19681943)	C	MER9a3	LTR/ERVK	(0)	512	1	1867796
12541	5.7	0.6	0.8	chr19	38935674	38937299	(19680317)	C	HERVK9-int	LTR/ERVK	(0)	6021	4399	1867796
188	25.6	8.2	8.2	chr19	45607349	45607433	(13010183)	C	AmnSINE1	SINE/5S-Deu-L2	(425)	150	66	1881761
13	3.5	9.7	2.9	chr19	45607530	45607560	(13010056)	+	GA-rich	Low_complexity	1	34	(0)	1881762
241	28.7	5.6	2.9	chr19	45607714	45607817	(13009799)	+	LTR33A	LTR/ERVL	261	367	(153)	1881763
232	30.1	5.2	0.4	chr19	55670357	55670454	(2947162)	C	L2a	LINE/L2	(18)	3408	3251	1904263
11362	5.9	0.2	1.0	chr2	19926547	19927997	(222265532)	+	HERVK9-int	LTR/ERVK	4583	6021	(0)	1939466
4232	4.7	0.2	0.4	chr2	19927998	19928511	(222265018)	+	MER9a2	LTR/ERVK	1	513	(0)	1939466
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
18	17.3	2.0	4.0	chr2	32947622	32947670	(209245859)	+	(CCG)n	Simple_repeat	1	50	(0)	1961245
21	14.9	0.0	4.2	chr2	32947823	32947870	(209245659)	+	(GCCC)n	Simple_repeat	1	48	(0)	1961246
3988	6.3	1.2	1.6	chr2	33914037	33914550	(208278979)	C	MER9a3	LTR/ERVK	(0)	512	1	1962756
10597	7.8	0.1	0.4	chr2	33914551	33915995	(208277534)	C	HERVK9-int	LTR/ERVK	(0)	6021	4582	1962756
13	21.7	0.0	0.0	chr2	55050321	55050352	(187143177)	+	(GCC)n	Simple_repeat	1	32	(0)	1995182
8076	6.0	0.8	0.2	chr2	56722684	56723703	(185469826)	+	HERVK9-int	LTR/ERVK	4991	6016	(5)	1997748
4183	5.5	0.6	0.0	chr2	56723709	56724218	(185469311)	+	MER9a1	LTR/ERVK	1	513	(0)	1997749
6545	10.5	1.8	3.9	chr2	62478946	62479603	(179713926)	C	L1MA5A	LINE/L1	(10)	6287	5635	2006583
10070	11.9	0.9	6.0	chr2	78045168	78046832	(164146697)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2030424
460	31.4	14.0	3.5	chr2	84888560	84889155	(157304374)	C	L2b	LINE/L2	(130)	3245	2577	2039587
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
3706	7.5	6.1	0.0	chr2	99270681	99271160	(142922369)	C	MER9a3	LTR/ERVK	(0)	512	2	2056180
6644	7.4	0.0	0.2	chr2	99271162	99271992	(142921537)	C	HERVK9-int	LTR/ERVK	(0)	6021	5193	2056180
633	28.1	1.5	8.5	chr2	110975248	110975592	(131217937)	C	L1MC4	LINE/L1	(5)	8037	7742	2072957
1218	26.5	9.7	6.7	chr2	110975603	110976236	(131217293)	+	HAL1ME	LINE/L1	863	1584	(881)	2072958
11387	5.9	0.5	0.6	chr2	116254189	116255631	(125937898)	+	HERVK9-int	LTR/ERVK	4581	6021	(0)	2080856
3931	7.1	1.2	0.2	chr2	116255632	116256139	(125937390)	+	MER9a2	LTR/ERVK	1	513	(0)	2080856
218	27.8	4.9	4.9	chr2	128662377	128662478	(113531051)	+	MIRb	SINE/MIR	66	167	(101)	2099542
184	14.3	2.8	2.8	chr2	128662530	128662565	(113530964)	C	L2	LINE/L2	(3383)	36	1	2099543
1127	11.6	0.3	0.0	chr2	132286523	132287784	(109905745)	C	ACRO1	Satellite/acro	(55)	1265	1	2104358
15	17.1	0.0	9.1	chr2	132670108	132670162	(109523367)	+	(CGCTCG)n	Simple_repeat	1	55	(0)	2104909
12	18.4	5.4	0.0	chr2	132670275	132670311	(109523218)	+	(GTGGCGG)n	Simple_repeat	1	39	(0)	2104910
3386	14.2	12.3	0.3	chr2	136137425	136138046	(106055483)	C	MER39	LTR/ERV1	(0)	707	1	2110212
379	18.0	5.2	7.2	chr2	143232175	143232312	(98961217)	C	Charlie18a	DNA/hAT-Charlie	(80)	262	128	2119818
4298	5.1	0.0	0.2	chr2	152273628	152274141	(89919388)	C	MER9a1	LTR/ERVK	(0)	513	1	2132168
27569	5.4	3.3	0.1	chr2	152274142	152277893	(89915636)	C	HERVK9-int	LTR/ERVK	(0)	6021	2149	2132168
22479	17.4	8.0	3.1	chr2	160087151	160089260	(82104269)	C	HUERS-P3-int	LTR/ERV1	(6484)	2435	1	2142604
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
14	12.6	0.0	7.5	chr2	179264814	179264853	(62928676)	+	G-rich	Low_complexity	1	40	(0)	2169920
227	25.7	12.8	1.8	chr2	179264958	179265068	(62928461)	+	MIRc	SINE/MIR	2	126	(142)	2169921
654	29.5	5.3	7.6	chr2	206230450	206230819	(35962710)	+	LTR88c	LTR/Gypsy?	4	364	(498)	2208273
11605	6.3	0.1	1.0	chr2	218115041	218116493	(24077036)	+	HERVK9-int	LTR/ERVK	4583	6021	(0)	2225482
4189	5.7	1.0	1.2	chr2	218116494	218117006	(24076523)	+	MER9a3	LTR/ERVK	1	512	(0)	2225482
14	12.8	5.9	0.0	chr2	219387809	219387842	(22805687)	+	(CGCCC)n	Simple_repeat	1	36	(0)	2227845
571	25.6	6.4	11.3	chr2	231182109	231182390	(11011139)	+	MamTip1	DNA/hAT-Tip100	1	267	(0)	2246365
1966	23.1	0.2	0.1	chr20	63841	67292	(64376875)	+	(ATTCC)n	Simple_repeat	2	3456	(0)	2262202
11871	5.3	0.6	0.3	chr20	5306743	5308179	(59135988)	+	HERVK9-int	LTR/ERVK	4582	6021	(0)	2272353
4226	4.1	0.8	4.5	chr20	5308180	5308712	(59135455)	+	MER9a2	LTR/ERVK	1	513	(0)	2272353
701	30.9	13.2	6.0	chr20	11864392	11864868	(52579299)	+	L2	LINE/L2	1433	1962	(1457)	2282635
915	25.0	9.1	0.0	chr20	29120632	29120946	(35323221)	+	LTR53	LTR/ERVL	169	511	(8)	2303905
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
40	30.7	2.7	2.1	chr20	30815139	30815324	(33628843)	+	GA-rich	Low_complexity	1	191	(0)	2305476
1030	9.4	0.8	0.0	chr20	30866424	30866600	(33577567)	+	BSR/Beta	Satellite	1	178	(0)	2305529
576	23.4	6.1	1.9	chr20	30866632	30866788	(33577379)	+	MIRb	SINE/MIR	33	196	(72)	2305530
2574	6.5	0.0	0.0	chr20	36864405	36864713	(27579454)	+	AluSg	SINE/Alu	2	310	(0)	2318643
234	33.8	13.5	4.0	chr20	38336129	38336624	(26107543)	+	L2	LINE/L2	2070	2619	(800)	2321944
17843	5.6	0.5	0.0	chr20	39724341	39726629	(24717538)	+	HERVK9-int	LTR/ERVK	3723	6021	(0)	2324639
4246	6.2	0.0	0.4	chr20	39726630	39727144	(24717023)	+	MER9a2	LTR/ERVK	1	513	(0)	2324639
949	20.6	13.3	0.3	chr20	46415030	46415316	(18028851)	C	LTR50	LTR/ERVL	(465)	330	1	2337628
235	16.3	2.8	0.7	chr20	46415630	46415709	(18028458)	C	MIR3	SINE/MIR	(33)	197	110	2337629
224	30.6	1.2	1.2	chr20	46415803	46415888	(18028279)	+	MIRb	SINE/MIR	125	210	(58)	2337630
427	33.3	9.7	1.0	chr20	61330793	61331092	(3113075)	C	L1ME4b	LINE/L1	(311)	581	253	2367235
206	30.7	13.8	1.2	chr20	61331199	61331363	(3112804)	+	L2a	LINE/L2	2653	2841	(578)	2367236
241	29.6	7.5	0.0	chr20	61331809	61331925	(3112242)	+	L2a	LINE/L2	3253	3426	(0)	2367236
222	27.5	3.5	5.2	chr20	61331948	61332062	(3112105)	+	L2b	LINE/L2	3258	3370	(5)	2367237
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
312	38.2	6.5	3.6	chr21	8419786	8420171	(38289812)	C	HAL1	LINE/L1	(1230)	1277	880	2373573
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
25399	0.2	1.5	0.8	chr21	8441146	8441992	(38267991)	+	LSU-rRNA_Hsa	rRNA	1	877	(4158)	2373624
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
800	10.7	0.6	0.5	chr21	9096388	9100565	(37609418)	+	CER	Satellite	1	4180	(0)	2374227
334	30.3	5.3	0.0	chr21	9246374	9246462	(37463521)	+	AluYa8	SINE/Alu	185	278	(32)	2374337
436	12.7	0.0	0.0	chr21	9246781	9246835	(37463148)	+	AluYj4	SINE/Alu	225	279	(32)	2374338
404	15.6	1.5	0.0	chr21	9247151	9247214	(37462769)	+	AluYj4	SINE/Alu	224	288	(23)	2374339
74	12.3	0.0	0.0	chr21	9247783	9247915	(37462068)	+	(TGGAA)n	Simple_repeat	1	133	(0)	2374340
378	16.1	3.0	0.2	chr21	9247917	9247990	(37461993)	+	AluJb	SINE/Alu	216	290	(12)	2374341
276	23.1	0.7	5.6	chr21	9367331	9367505	(37342478)	+	HSAT5	Satellite	1	166	(0)	2374470
292	25.6	0.0	4.8	chr21	9367666	9367880	(37342103)	+	HSAT5	Satellite	1	204	(1)	2374471
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
21	16.7	0.0	2.4	chr21	9819273	9819314	(36890669)	+	(AC)n	Simple_repeat	1	42	(0)	2374898
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
404	28.3	11.0	2.7	chr21	10427070	10427382	(36282601)	C	L2c	LINE/L2	(213)	3174	2827	2375541
25	15.4	0.0	0.0	chr21	10427515	10427557	(36282426)	+	(CA)n	Simple_repeat	1	43	(0)	2375542
5049	15.8	4.0	3.9	chr21	20838449	20838738	(25871245)	C	L1MA5A	LINE/L1	(0)	6297	6012	2386206
3973	6.5	0.4	0.8	chr21	20838739	20839253	(25870730)	+	MER9a2	LTR/ERVK	1	513	(0)	2386207
1298	29.2	11.9	0.6	chr21	32116545	32117019	(14592964)	+	LTR16E1	LTR/ERVL	1	536	(2)	2402691
232	29.8	6.9	2.4	chr21	32117020	32117143	(14592840)	C	L3	LINE/CR1	(51)	4048	3919	2402692
318	22.1	3.8	0.0	chr21	32117272	32117348	(14592635)	C	L1MB8	LINE/L1	(0)	6178	6099	2402693
299	31.7	0.9	0.0	chr21	33357001	33357104	(13352879)	+	Tigger19a	DNA/TcMar-Tigger	176	280	(43)	2404784
2206	8.1	1.0	2.0	chr21	33357531	33357827	(13352156)	C	AluSg7	SINE/Alu	(15)	294	1	2404785
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
1118	10.7	0.3	0.1	chr22	11814559	11816405	(39002063)	C	ACRO1	Satellite/acro	(55)	1851	1	2425389
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
290	22.2	1.5	0.5	chr22	11932477	11932565	(38885903)	C	L1P4	LINE/L1	(1123)	5023	4933	2425553
41	8.0	0.0	0.0	chr22	12173926	12173978	(38644490)	+	(GT)n	Simple_repeat	1	53	(0)	2425781
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
1974	15.9	0.3	1.0	chr22	12869703	12870016	(37948452)	C	AluSz6	SINE/Alu	(0)	312	1	2426154
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
248	12.9	3.9	2.6	chr22	18891846	18892362	(31926106)	+	(TATAATA)n	Simple_repeat	1	537	(0)	2431165
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
2334	25.4	6.2	6.2	chr22	44107397	44107875	(6710593)	+	MER21C	LTR/ERVL	8	554	(384)	2481373
2202	10.0	0.3	1.3	chr22	44107876	44108176	(6710292)	C	AluSx1	SINE/Alu	(14)	298	1	2481374
4022	6.8	2.3	0.0	chr3	20614383	20614883	(177680676)	C	MER9a2	LTR/ERVK	(0)	513	1	2526364
19086	4.9	0.1	0.3	chr3	20614884	20617187	(177678372)	C	HERVK9-int	LTR/ERVK	(0)	6021	3723	2526364
35912	6.3	0.7	0.1	chr3	49229259	49233690	(149061869)	+	HERVK9-int	LTR/ERVK	1561	6021	(0)	2570860
3122	6.5	0.5	0.3	chr3	49233691	49234078	(149061481)	+	MER9a3	LTR/ERVK	1	389	(123)	2570860
3760	14.1	3.2	1.6	chr3	72878188	72878843	(125416716)	C	L1MCa	LINE/L1	(4472)	2036	1330	2610117
3582	9.6	2.4	0.2	chr3	104281432	104281932	(94013627)	C	MER9a3	LTR/ERVK	(0)	512	1	2646864
34885	6.2	0.4	0.3	chr3	104281933	104286310	(94009249)	C	HERVK9-int	LTR/ERVK	(0)	6021	1638	2646864
11150	5.5	0.3	0.5	chr3	126094941	126096369	(72199190)	+	HERVK9-int	LTR/ERVK	4595	6021	(0)	2678119
4150	6.9	0.8	1.9	chr3	126096370	126096888	(72198671)	+	MER9a2	LTR/ERVK	1	513	(0)	2678119
35939	6.1	0.2	0.3	chr3	129902413	129906802	(68388757)	+	HERVK9-int	LTR/ERVK	1637	6021	(0)	2684629
3749	7.8	2.5	0.4	chr3	129906803	129907243	(68388316)	+	MER9a3	LTR/ERVK	1	444	(68)	2684629
277	18.2	34.2	0.0	chr3	141192000	141192120	(57103439)	+	MIRb	SINE/MIR	37	220	(48)	2701935
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
2172	14.7	11.2	0.5	chr3	153793567	153793948	(44501611)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2720269
68	0.0	3.1	0.0	chr3	158106572	158106636	(40188923)	+	(AG)n	Simple_repeat	1	67	(0)	2726364
2538	8.7	9.1	0.5	chr3	167176901	167177283	(31118276)	C	MER9a3	LTR/ERVK	(93)	419	1	2738409
28999	10.9	1.8	1.3	chr3	167177284	167182593	(31112966)	C	HERVK9-int	LTR/ERVK	(1250)	6184	786	2738409
1495	3.3	1.1	0.0	chr3	172723956	172724135	(25571424)	+	HERVK14-int	LTR/ERVK	5716	5897	(199)	2746577
306	22.1	0.0	1.8	chr3	172724136	172724210	(25571349)	+	MER41C	LTR/ERV1	1	73	(561)	2746581
757	7.7	5.6	1.7	chr3	172724211	172724329	(25571230)	+	HERVK14-int	LTR/ERVK	5973	6096	(0)	2746582
2012	11.4	8.3	3.0	chr3	172724333	172724743	(25570816)	+	LTR14B	LTR/ERVK	1	607	(1)	2746582
580	29.5	9.7	4.7	chr3	194491152	194491493	(3804066)	+	L2	LINE/L2	2346	2713	(706)	2781200
397	29.8	8.1	8.9	chr3	194491595	194492323	(3803236)	+	L2b	LINE/L2	2397	3129	(246)	2781204
2105	10.3	2.1	0.3	chr3	194748954	194749235	(3546324)	C	AluSz	SINE/Alu	(17)	295	9	2781782
15	5.6	0.0	0.0	chr3	194749443	194749461	(3546098)	+	(T)n	Simple_repeat	1	19	(0)	2781783
440	25.1	14.0	5.6	chr4	5050185	5050399	(185164156)	C	MIRb	SINE/MIR	(15)	253	18	2795938
29	0.0	0.0	0.0	chr4	5050412	5050439	(185164116)	+	(TTTTG)n	Simple_repeat	1	28	(0)	2795939
270	20.3	7.1	4.8	chr4	5050923	5051005	(185163550)	+	MIR3	SINE/MIR	87	171	(37)	2795940
11150	7.4	0.1	0.6	chr4	35143248	35144693	(155069862)	+	HERVK9-int	LTR/ERVK	4582	6021	(0)	2843042
4058	7.2	0.0	1.0	chr4	35144694	35145211	(155069344)	+	MER9a2	LTR/ERVK	1	513	(0)	2843042
45962	5.8	0.4	0.2	chr4	45042563	45048504	(145166051)	+	HERVK9-int	LTR/ERVK	1	6021	(0)	2859060
4089	6.5	0.0	1.5	chr4	45048505	45049024	(145165531)	+	MER9a3	LTR/ERVK	1	512	(0)	2859060
863	17.6	1.2	0.2	chr4	49090455	49091234	(141123321)	+	ALR/Alpha	Satellite/centr	1	788	(0)	2864886
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
1130	13.8	0.3	0.1	chr4	49514156	49515857	(140698698)	+	ACRO1	Satellite/acro	1	1705	(0)	2865184
330	33.6	10.3	0.0	chr4	65286334	65286446	(124928109)	+	MIR	SINE/MIR	13	138	(124)	2884199
1136	2.2	0.0	0.7	chr4	71863361	71863496	(118351059)	+	HERVK9-int	LTR/ERVK	5702	5836	(185)	2892762
283	9.1	0.0	2.2	chr4	71863491	71863535	(118351020)	+	HERVK9-int	LTR/ERVK	5978	6021	(0)	2892762
3960	7.1	0.6	0.0	chr4	71863536	71864044	(118350511)	+	MER9a3	LTR/ERVK	1	512	(0)	2892762
4096	6.6	0.2	0.0	chr4	91180683	91181194	(99033361)	C	MER9a1	LTR/ERVK	(0)	513	1	2920864
35831	5.6	3.2	0.2	chr4	91181195	91185949	(99028606)	C	HERVK9-int	LTR/ERVK	(0)	6021	1126	2920864
33397	6.2	2.3	0.1	chr4	99368132	99372622	(90841933)	+	HERVK9-int	LTR/ERVK	1436	6021	(0)	2931607
3627	9.3	1.4	0.2	chr4	99372623	99373128	(90841427)	+	MER9a3	LTR/ERVK	1	512	(0)	2931607
4109	6.0	1.6	0.2	chr4	99486388	99486892	(90727663)	C	MER9a3	LTR/ERVK	(0)	512	1	2931737
17582	5.9	0.4	0.3	chr4	99486893	99489189	(90725366)	C	HERVK9-int	LTR/ERVK	(0)	6021	3723	2931737
47	0.0	2.3	0.0	chr4	123102799	123102842	(67111713)	+	(TG)n	Simple_repeat	1	45	(0)	2963465
2986	10.3	9.2	0.0	chr4	135954866	135955330	(54259225)	C	MER9a3	LTR/ERVK	(0)	512	1	2979891
6153	7.6	1.7	0.2	chr4	135955333	135956147	(54258408)	C	HERVK9-int	LTR/ERVK	(2)	6019	5193	2979891
2375	15.0	5.8	6.1	chr4	139153481	139154137	(51060418)	+	MER4CL34	LTR/ERV1	18	872	(0)	2984039
3866	6.9	1.0	0.2	chr4	153688368	153688872	(36525683)	C	MER9a3	LTR/ERVK	(0)	512	4	3005064
33703	5.8	0.3	0.2	chr4	153688875	153693253	(36521302)	C	HERVK9-int	LTR/ERVK	(0)	6021	1638	3005064
48005	6.1	0.5	0.3	chr4	176344247	176350257	(13864298)	+	HERVK9-int	LTR/ERVK	1	6021	(0)	3035422
4202	5.1	0.4	0.4	chr4	176350258	176350769	(13863786)	+	MER9a3	LTR/ERVK	1	512	(0)	3035422
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
1095	10.4	0.7	0.9	chr4	190180974	190182175	(32380)	+	BSR/Beta	Satellite	1	1199	(0)	3054653
20695	5.1	1.9	0.0	chr5	246675	249305	(181288954)	+	HERVK9-int	LTR/ERVK	3321	6003	(18)	3055188
253	30.4	3.7	2.6	chr5	249306	249325	(181288934)	+	L1M5	LINE/L1	4155	4171	(1975)	3055189
3648	6.0	8.0	0.0	chr5	249326	249795	(181288464)	+	MER9a3	LTR/ERVK	2	512	(0)	3055190
3516	5.5	8.0	0.0	chr5	1577862	1578332	(179959927)	C	MER9a3	LTR/ERVK	(0)	512	1	3056380
239	32.2	3.7	2.1	chr5	1578333	1578346	(179959913)	C	L1M5	LINE/L1	(1975)	4171	4160	3056379
11679	5.1	2.0	0.1	chr5	1578347	1579846	(179958413)	C	HERVK9-int	LTR/ERVK	(17)	6004	4477	3056381
27925	9.4	0.6	0.3	chr5	19703885	19708460	(161829799)	+	HERVK9-int	LTR/ERVK	1638	6184	(1250)	3079693
3409	7.1	6.2	0.4	chr5	19708465	19708946	(161829313)	+	MER9a3	LTR/ERVK	1	512	(0)	3079693
3816	6.2	4.7	0.0	chr5	34781776	34782263	(146755996)	C	MER9a3	LTR/ERVK	(0)	512	1	3100407
14263	5.7	0.3	0.1	chr5	34782282	34784123	(146754136)	C	HERVK9-int	LTR/ERVK	(8)	6013	4167	3100407
8910	19.1	1.0	1.0	chr5	40923953	40925603	(140612656)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1651	1	3109690
11188	6.8	0.1	1.2	chr5	44791574	44793017	(136745242)	+	HERVK9-int	LTR/ERVK	4594	6021	(0)	3114690
4060	6.7	0.4	0.2	chr5	44793018	44793529	(136744730)	+	MER9a2	LTR/ERVK	1	513	(0)	3114690
1132	5.7	0.0	0.7	chr5	44989679	44989819	(136548440)	+	HERVK9-int	LTR/ERVK	5882	6021	(0)	3114981
4020	8.0	0.0	0.0	chr5	44989820	44990332	(136547927)	+	MER9a2	LTR/ERVK	1	513	(0)	3114981
13	14.2	3.2	0.0	chr5	51624156	51624186	(129914073)	+	(TGTTAT)n	Simple_repeat	1	32	(0)	3117958
12	14.0	6.2	0.0	chr5	51624397	51624428	(129913831)	+	GA-rich	Low_complexity	1	34	(0)	3117959
2199	17.1	1.8	0.0	chr5	58332093	58332520	(123205739)	+	L1MA9	LINE/L1	5872	6307	(5)	3127980
1583	27.6	5.4	5.2	chr5	66239120	66239751	(115298508)	C	L2a	LINE/L2	(5)	3421	2814	3139147
9233	16.4	2.3	0.6	chr5	101175842	101177444	(80360815)	+	MSTA-int	LTR/ERVL-MaLR	1	1630	(1)	3188626
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
4338	12.6	1.4	2.4	chr5	106535765	106535989	(75002270)	C	L1PA13	LINE/L1	(508)	5655	5437	3195260
9604	6.1	0.8	0.1	chr5	113714842	113716096	(67822163)	+	HERVK9-int	LTR/ERVK	4758	6021	(0)	3204660
4196	6.2	0.0	1.4	chr5	113716097	113716616	(67821643)	+	MER9a2	LTR/ERVK	1	513	(0)	3204660
482	33.5	5.1	2.0	chr5	171810697	171811000	(9727259)	+	L2	LINE/L2	2578	2891	(528)	3296093
3062	21.1	2.9	4.3	chr5	171811019	171811321	(9726938)	C	Tigger17a	DNA/TcMar-Tigger	(8)	646	359	3296094
2174	11.6	0.0	0.3	chr5	171811322	171811614	(9726645)	C	AluSg	SINE/Alu	(18)	292	1	3296095
1236	29.4	8.6	3.3	chr5	174404779	174405807	(7132452)	+	L2a	LINE/L2	2338	3426	(0)	3301446
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
2623	5.2	0.0	0.0	chr5	180193048	180193354	(1344905)	C	AluYk2	SINE/Alu	(4)	307	1	3312212
899	21.6	11.2	3.6	chr5	180193355	180193456	(1344803)	+	Charlie5	DNA/hAT-Charlie	2522	2624	(0)	3312210
941	30.0	7.7	5.7	chr5	180193491	180194048	(1344211)	+	L1MC5a	LINE/L1	2208	2777	(0)	3312213
11	27.9	1.6	4.8	chr5	180619104	180619165	(919094)	+	(GGCGGCG)n	Simple_repeat	1	63	(0)	3312984
17	26.4	4.6	1.5	chr5	180619152	180619216	(919043)	+	(GC)n	Simple_repeat	1	68	(0)	3312985
2864	13.7	5.5	0.0	chr6	3429564	3430059	(167375920)	+	L1MB3	LINE/L1	5649	6173	(10)	3318873
587	30.8	10.6	5.2	chr6	14161829	14162191	(156643788)	C	L3	LINE/CR1	(3686)	413	29	3335559
490	33.1	12.7	1.3	chr6	16787622	16788157	(154017822)	C	L2b	LINE/L2	(1216)	2203	1598	3340055
2178	12.1	1.0	0.3	chr6	27894136	27894440	(142911539)	C	AluSg4	SINE/Alu	(3)	307	1	3357785
26743	6.0	2.2	0.3	chr6	45236893	45241193	(125564786)	+	HERVK9-int	LTR/ERVK	1637	6021	(0)	3388349
3815	6.8	1.8	0.8	chr6	45241194	45241700	(125564279)	+	MER9a3	LTR/ERVK	1	512	(0)	3388349
4216	5.4	0.2	0.0	chr6	47312692	47313195	(123492784)	C	MER9a1	LTR/ERVK	(8)	505	1	3391556
2653	7.4	15.1	0.5	chr6	47313196	47313830	(123492149)	C	HERVK9-int	LTR/ERVK	(0)	6021	5294	3391556
17426	4.7	0.1	1.5	chr6	48878125	48879140	(121926839)	+	HERVK14C-int	LTR/ERVK	6446	7434	(0)	3393689
4517	8.6	0.3	0.0	chr6	48879141	48879725	(121926254)	+	LTR14C	LTR/ERVK	1	587	(0)	3393689
1344	35.5	10.9	2.6	chr6	56659264	56660334	(114145645)	C	L2	LINE/L2	(1098)	2321	1152	3404405
3497	11.3	1.7	7.9	chr6	68193497	68194130	(102611849)	C	PRIMA4_LTR	LTR/ERV1	(0)	594	1	3416403
1792	27.6	7.0	4.4	chr6	68194131	68194187	(102611792)	+	MLT1F2	LTR/ERVL-MaLR	505	560	(0)	3416402
3996	7.3	0.0	1.2	chr6	70445359	70445869	(100360110)	C	MER9a2	LTR/ERVK	(8)	505	1	3419225
7569	6.8	0.5	0.2	chr6	70445870	70446834	(100359145)	C	HERVK9-int	LTR/ERVK	(0)	6021	5054	3419225
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
3743	10.9	1.5	2.0	chr6	122504845	122505395	(48300584)	C	LTR14	LTR/ERVK	(0)	548	1	3490493
21007	17.8	5.5	5.6	chr6	122505399	122506694	(48299285)	C	HERVKC4-int	LTR/ERVK	(7)	5255	3955	3490493
2230	12.5	0.0	0.7	chr6	143213489	143213816	(27592163)	C	AluSx1	SINE/Alu	(0)	312	1	3519542
224	34.3	11.8	1.3	chr6	149983176	149983411	(20822568)	C	L2a	LINE/L2	(58)	3368	3105	3529469
13626	11.3	2.3	0.9	chr6	154104035	154107193	(16698786)	C	PABL_A-int	LTR/ERV1	(4)	5942	2186	3535816
1804	15.2	2.5	0.7	chr6	157264196	157264472	(13541507)	+	AluJr	SINE/Alu	7	288	(24)	3540633
299	29.8	7.9	10.7	chr6	157264521	157264689	(13541290)	+	MIRb	SINE/MIR	55	218	(50)	3540634
188	23.5	4.7	14.7	chr6	157265127	157265221	(13540758)	+	L2a	LINE/L2	2411	2495	(924)	3540635
17656	5.6	0.9	0.2	chr6	165461379	165463662	(5342317)	+	HERVK9-int	LTR/ERVK	3723	6021	(0)	3551984
4243	4.7	0.6	1.2	chr6	165463663	165464178	(5341801)	+	MER9a2	LTR/ERVK	1	513	(0)	3551984
388	35.6	4.6	3.7	chr6	168614431	168615747	(2190232)	+	TAR1	Satellite/telo	1	1328	(552)	3555632
4159	6.1	0.4	0.0	chr6	170593081	170593589	(212390)	C	MER9a3	LTR/ERVK	(0)	512	2	3557629
9541	5.5	0.9	0.2	chr6	170593591	170594829	(211150)	C	HERVK9-int	LTR/ERVK	(0)	6021	4774	3557629
2296	8.1	1.9	2.3	chr7	5189692	5190001	(154155972)	C	AluSx	SINE/Alu	(3)	309	1	3566483
2220	10.3	2.4	0.0	chr7	23287155	23287445	(136058528)	+	AluSg	SINE/Alu	1	298	(12)	3592066
188	32.5	1.2	0.0	chr7	23287461	23287543	(136058430)	+	L2	LINE/L2	2825	2908	(511)	3592067
27	20.1	0.0	0.0	chr7	26982771	26982832	(132363141)	+	(TTCCTC)n	Simple_repeat	1	62	(0)	3597825
2792	18.3	0.5	10.4	chr7	30421550	30422182	(128923791)	C	LTR73	LTR/ERV1	(2)	570	1	3603112
11721	5.5	0.4	0.6	chr7	35910686	35912115	(123433858)	+	HERVK9-int	LTR/ERVK	4594	6021	(0)	3611391
4324	6.0	0.0	0.0	chr7	35912116	35912628	(123433345)	+	MER9a2	LTR/ERVK	1	513	(0)	3611391
2579	21.4	8.8	9.9	chr7	43190972	43191827	(116154146)	C	LTR102_Mam	LTR/ERVL	(4)	847	3	3622254
4160	6.3	0.8	0.0	chr7	45726259	45726767	(113619206)	C	MER9a2	LTR/ERVK	(0)	513	1	3626272
893	4.3	0.0	0.8	chr7	45726768	45726885	(113619088)	C	HERVK9-int	LTR/ERVK	(0)	6021	5905	3626272
4470	2.9	0.0	0.4	chr7	46433647	46434161	(112911812)	C	MER9a1	LTR/ERVK	(0)	513	1	3627229
1945	15.0	2.1	4.8	chr7	46434162	46434528	(112911445)	+	THE1D	LTR/ERVL-MaLR	21	381	(0)	3627228
16	5.3	0.0	0.0	chr7	48117243	48117262	(111228711)	+	(T)n	Simple_repeat	1	20	(0)	3629506
3223	4.2	0.0	0.3	chr7	56152553	56152938	(103193035)	+	HERVK9-int	LTR/ERVK	5637	6021	(0)	3640042
4266	5.7	0.2	0.2	chr7	56152939	56153451	(103192522)	+	MER9a2	LTR/ERVK	1	513	(0)	3640042
94	10.7	1.1	1.1	chr7	57495470	57495644	(101850329)	+	(GGAAT)n	Simple_repeat	1	177	(0)	3642547
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
270	23.1	8.3	3.2	chr7	75955253	75955377	(83390596)	+	MER113	DNA/hAT-Charlie	373	504	(17)	3671000
31	0.0	0.0	0.0	chr7	106101439	106101467	(53244506)	+	(C)n	Simple_repeat	1	29	(0)	3717099
2823	10.6	1.6	0.5	chr7	112246867	112247294	(47098679)	+	LTR56	LTR/ERV1	12	444	(1)	3725501
25	25.9	3.1	3.0	chr7	120289001	120289031	(39056942)	+	GA-rich	Low_complexity	1	31	(0)	3736167
50	2.2	0.0	0.0	chr7	120289032	120289078	(39056895)	+	(AC)n	Simple_repeat	1	47	(0)	3736168
25	25.9	3.1	3.0	chr7	120289079	120289142	(39056831)	+	GA-rich	Low_complexity	32	95	(0)	3736169
13	21.1	0.0	6.1	chr7	120289306	120289354	(39056619)	+	A-rich	Low_complexity	1	49	(0)	3736170
15	15.8	0.0	2.7	chr7	120289431	120289467	(39056506)	+	A-rich	Low_complexity	1	37	(0)	3736171
9538	14.2	3.9	0.2	chr7	126275105	126276625	(33069348)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1580	2	3744220
863	29.2	16.9	6.3	chr7	140368587	140369119	(18976854)	+	L2a	LINE/L2	2330	2960	(459)	3767261
960	25.7	8.8	3.0	chr7	140369104	140369436	(18976537)	+	L2a	LINE/L2	3073	3426	(0)	3767261
1561	28.9	13.8	2.0	chr7	148249159	148250491	(11095482)	+	L2a	LINE/L2	1936	3425	(1)	3778465
3684	6.8	4.9	0.2	chr7	152038128	152038615	(7307358)	C	MER9a3	LTR/ERVK	(0)	512	1	3784475
19158	5.2	1.9	0.1	chr7	152038616	152040933	(7305040)	C	HERVK9-int	LTR/ERVK	(0)	6021	3662	3784475
190	31.3	8.5	6.3	chr7	155946005	155946222	(3399751)	C	MIRb	SINE/MIR	(35)	233	7	3790299
16	0.0	3.9	3.7	chr7	158151565	158151590	(1194383)	+	(GTG)n	Simple_repeat	1	27	(0)	3793030
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
305	32.3	2.0	1.0	chr8	23715126	23715225	(121423411)	C	MIRc	SINE/MIR	(72)	196	96	3828398
12	30.7	0.0	0.0	chr8	23715514	23715557	(121423079)	+	A-rich	Low_complexity	1	44	(0)	3828399
477	28.9	10.4	1.3	chr8	26506086	26506320	(118632316)	+	MIRb	SINE/MIR	3	261	(7)	3832871
23	9.2	0.0	0.0	chr8	26506597	26506631	(118632005)	+	(AAC)n	Simple_repeat	1	35	(0)	3832872
3948	6.4	2.5	1.6	chr8	30147066	30147572	(114991064)	C	MER9a3	LTR/ERVK	(0)	512	1	3839148
10187	5.7	0.2	0.1	chr8	30147573	30148796	(114989840)	C	HERVK9-int	LTR/ERVK	(0)	6021	4797	3839148
10806	6.6	0.1	0.3	chr8	39874053	39875482	(105263154)	+	HERVK9-int	LTR/ERVK	4594	6021	(0)	3854440
4088	5.3	0.6	2.9	chr8	39875483	39876006	(105262630)	+	MER9a3	LTR/ERVK	1	512	(0)	3854440
9952	7.7	0.5	0.2	chr8	46879517	46880765	(98257871)	+	HERVK9-int	LTR/ERVK	4769	6021	(0)	3861219
4060	7.8	0.4	0.6	chr8	46880766	46881278	(98257358)	+	MER9a3	LTR/ERVK	1	512	(0)	3861219
4277	6.2	0.0	0.0	chr8	48244515	48245027	(96893609)	C	MER9a2	LTR/ERVK	(0)	513	1	3863132
10088	5.4	4.7	0.1	chr8	48245028	48247174	(96891462)	C	HERVK9-int	LTR/ERVK	(0)	6021	3723	3863132
187	29.3	3.5	0.0	chr8	52941005	52941086	(92197550)	+	MER5A	DNA/hAT-Charlie	74	158	(31)	3868909
15	10.0	6.2	0.0	chr8	52941151	52941182	(92197454)	+	GA-rich	Low_complexity	1	34	(0)	3868910
18	0.0	4.3	0.0	chr8	52941548	52941570	(92197066)	+	(TG)n	Simple_repeat	1	24	(0)	3868911
3664	8.2	4.7	0.2	chr8	52979863	52980351	(92158285)	C	MER9a3	LTR/ERVK	(0)	512	1	3868954
721	8.6	0.0	1.1	chr8	52980352	52980445	(92158191)	C	HERVK9-int	LTR/ERVK	(0)	6021	5929	3868954
12582	5.3	0.9	0.3	chr8	52980446	52981957	(92156679)	C	HERVK9-int	LTR/ERVK	(887)	5134	3613	3868954
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
36386	10.6	4.3	3.4	chr8	68889173	68895123	(76243513)	+	HERVK9-int	LTR/ERVK	18	6021	(0)	3891274
3873	6.6	1.6	0.0	chr8	68895128	68895627	(76243009)	+	MER9a3	LTR/ERVK	5	512	(0)	3891274
2042	17.6	0.0	0.0	chr8	70482100	70482388	(74656248)	C	AluJo	SINE/Alu	(23)	289	1	3893894
34927	6.1	0.6	0.2	chr8	75045235	75049598	(70089038)	+	HERVK9-int	LTR/ERVK	1637	6021	(0)	3900463
4031	6.3	0.6	0.0	chr8	75049599	75050107	(70088529)	+	MER9a3	LTR/ERVK	1	512	(0)	3900463
15130	3.6	0.0	0.2	chr8	78652303	78654089	(66484547)	+	HERVK14C-int	LTR/ERVK	5652	7434	(0)	3904956
4675	7.0	0.0	0.0	chr8	78654090	78654676	(66483960)	+	LTR14C	LTR/ERVK	1	587	(0)	3904956
298	29.0	3.1	1.6	chr8	85659943	85660068	(59478568)	C	L1ME4b	LINE/L1	(0)	892	765	3914925
322	27.6	0.0	0.0	chr8	85660141	85660227	(59478409)	C	MLT1F1	LTR/ERVL-MaLR	(482)	87	1	3914926
4592	9.3	0.1	1.5	chr8	85660229	85660904	(59477732)	C	L1P1	LINE/L1	(2973)	3173	2507	3914927
9953	10.6	0.1	0.7	chr8	85742400	85743923	(59394713)	C	L1P1	LINE/L1	(2125)	4021	2507	3914963
14119	14.0	1.7	0.2	chr8	90743596	90748680	(54389956)	C	L1PA10	LINE/L1	(10)	6343	1154	3921575
25	0.0	0.0	0.0	chr8	101643370	101643396	(43495240)	+	(A)n	Simple_repeat	1	27	(0)	3939133
272	38.7	4.9	3.2	chr8	106360980	106361198	(38777438)	+	L2b	LINE/L2	3152	3374	(1)	3946416
817	27.1	1.6	4.6	chr8	134993482	134993806	(10144830)	C	L2a	LINE/L2	(0)	3426	3112	3993276
492	29.4	14.2	3.0	chr8	134993800	134994104	(10144532)	C	L2a	LINE/L2	(478)	2941	2597	3993276
552	26.6	9.1	3.4	chr8	134994105	134994310	(10144326)	+	Tigger12	DNA/TcMar-Tigger	2245	2463	(12)	3993277
3940	7.0	0.0	7.1	chr8	136907873	136908424	(8230212)	C	MER9a1	LTR/ERVK	(0)	513	1	3996393
14051	6.3	0.3	0.2	chr8	136908425	136910185	(8228451)	C	HERVK9-int	LTR/ERVK	(0)	6021	4258	3996393
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
1834	17.6	3.0	0.0	chr8	144643185	144643479	(495157)	+	AluJb	SINE/Alu	6	309	(3)	4007856
596	24.4	6.3	0.0	chr8	144830314	144830522	(308114)	C	L1M5	LINE/L1	(700)	5494	5272	4008166
27602	5.5	0.2	0.1	chr8	145028836	145032160	(106476)	+	HERVK14C-int	LTR/ERVK	4106	7434	(0)	4008437
4562	6.1	4.8	0.0	chr8	145032161	145032719	(105917)	+	LTR14C	LTR/ERVK	1	587	(0)	4008437
296	22.0	5.7	2.5	chr9	41229379	41230391	(97164326)	+	(TG)n	Simple_repeat	1	1071	(0)	4068370
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
2605	29.9	5.1	4.7	chr9	65388281	65390272	(73004445)	+	SST1	Satellite/centr	1	2001	(859)	4076190
268	8.8	1.9	1.9	chr9	70038166	70038638	(68356079)	+	(TGGAA)n	Simple_repeat	1	482	(0)	4082515
401	30.9	4.5	6.4	chr9	70644057	70644260	(67750457)	C	L2a	LINE/L2	(0)	3426	3227	4083536
398	36.2	0.7	0.0	chr9	70644304	70644444	(67750273)	C	FordPrefect	DNA/hAT-Tip100	(1257)	426	285	4083537
10374	7.4	0.8	0.9	chr9	70644445	70646729	(67747988)	+	L1PA7	LINE/L1	3877	6153	(1)	4083538
1129	22.4	4.1	6.0	chr9	77183205	77183574	(61211143)	C	L1ME1	LINE/L1	(11)	6168	5806	4093916
1633	19.9	0.9	0.3	chr9	77183571	77183892	(61210825)	+	L1ME1	LINE/L1	5483	5806	(373)	4093916
6301	17.9	3.4	1.0	chr9	87662586	87662853	(50731864)	C	L1PB4	LINE/L1	(1733)	4413	4119	4109827
317	26.4	4.4	1.5	chr9	87663257	87663387	(50731330)	C	L1ME3B	LINE/L1	(17)	6225	6091	4109830
4545	5.7	0.2	0.0	chr9	93751064	93751574	(44643143)	C	MER9a2	LTR/ERVK	(0)	513	2	4118527
11179	6.0	0.7	0.4	chr9	93751576	93752941	(44641776)	C	HERVK9-int	LTR/ERVK	(0)	6021	4652	4118527
4125	6.8	0.2	0.0	chr9	118633943	118634454	(19760263)	C	MER9a2	LTR/ERVK	(0)	513	1	4161525
420	30.2	5.5	6.7	chr9	121259076	121259646	(17135071)	C	L2c	LINE/L2	(4)	3422	2913	4166615
280	30.3	8.4	8.0	chr9	121260207	121260418	(17134299)	+	MamGypLTR3	LTR/Gypsy	664	876	(18)	4166616
205	32.3	1.5	0.0	chr9	128821510	128821574	(9573143)	C	MIRb	SINE/MIR	(200)	68	3	4181407
28	13.2	0.0	0.0	chrX	3788565	3788607	(152252288)	+	(A)n	Simple_repeat	1	43	(0)	4365594
1904	14.7	8.9	0.0	chrX	9326987	9327313	(146713582)	+	MLT1A0	LTR/ERVL-MaLR	3	361	(4)	4374573
30	0.0	3.7	7.1	chrX	9327558	9327611	(146713284)	+	(CACATGGGGA)n	Simple_repeat	1	56	(0)	4374574
18	25.2	0.0	0.0	chrX	9327618	9327660	(146713235)	+	(AC)n	Simple_repeat	1	43	(0)	4374575
377	27.9	24.0	6.1	chrX	29266726	29267022	(126773873)	C	MLT1M	LTR/ERVL-MaLR	(199)	473	124	4406452
3955	7.7	0.6	0.2	chrX	57203018	57203527	(98837368)	C	MER9a3	LTR/ERVK	(0)	512	1	4448874
7421	7.2	0.3	0.0	chrX	57203541	57204491	(98836404)	C	HERVK9-int	LTR/ERVK	(15)	6006	5053	4448875
2260	10.8	0.7	2.2	chrX	70122067	70122380	(85918515)	+	AluSq2	SINE/Alu	2	310	(3)	4459147
48	3.5	3.4	0.0	chrX	70122389	70122447	(85918448)	+	(CTCTCC)n	Simple_repeat	1	61	(0)	4459148
10304	4.1	0.7	8.0	chrX	70122448	70123902	(85916993)	+	SVA_B	Retroposon/SVA	35	1383	(0)	4459149
4133	6.5	0.2	0.0	chrX	73318321	73318832	(82722063)	C	MER9a1	LTR/ERVK	(0)	513	1	4464396
24122	5.8	4.5	0.6	chrX	73318833	73323801	(82717094)	C	HERVK9-int	LTR/ERVK	(0)	6021	801	4464396
1887	26.6	4.6	6.5	chrX	73677882	73678614	(82362281)	C	L1M2	LINE/L1	(5043)	1806	1089	4464643
11534	22.1	7.8	7.7	chrX	75326408	75329359	(80711536)	+	HERVK9-int	LTR/ERVK	3062	6020	(1)	4466634
3943	4.8	2.2	0.2	chrX	75329361	75329861	(80711034)	+	MER9a3	LTR/ERVK	2	512	(0)	4466634
12315	6.7	1.0	0.2	chrX	77079875	77081412	(78959483)	+	HERVK9-int	LTR/ERVK	4471	6021	(0)	4467998
4440	6.6	0.0	0.4	chrX	77081413	77081927	(78958968)	+	MER9a2	LTR/ERVK	1	513	(0)	4467998
19	9.4	0.0	5.3	chrX	90040861	90040898	(65999997)	+	(TTC)n	Simple_repeat	1	38	(0)	4482060
274	38.0	2.5	3.1	chrX	115591770	115591932	(40448963)	C	MIRc	SINE/MIR	(104)	164	3	4515801
395	25.9	4.6	3.5	chrX	153818485	153818656	(2222239)	C	L2a	LINE/L2	(1107)	2312	2139	4570763
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
1464	23.6	8.9	4.8	chrY	11281374	11281813	(45945602)	C	MER21C	LTR/ERVL	(22)	916	457	4589057
10957	28.1	0.5	0.1	chrY	26643208	26653351	(30574064)	+	(AATGG)n	Simple_repeat	1	10181	(0)	4607159