13	21.0	3.2	6.2	chr1	2195398	2195459	(246760963)	+	(CTGGCCC)n	Simple_repeat	1	64	(0)	2984
334	31.5	15.9	0.7	chr1	6741343	6741377	(242215045)	C	MIRc	SINE/MIR	(64)	204	169	8808
2023	20.4	3.0	7.7	chr1	6741378	6741814	(242214608)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	84	8809
1062	23.9	14.3	3.5	chr1	8980886	8981262	(239975160)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	81	12680
1810	20.9	7.6	8.5	chr1	11881859	11882365	(237074057)	+	MLT1D	LTR/ERVL-MaLR	4	505	(0)	18637
202	29.1	7.8	7.3	chr1	11882366	11882380	(237074042)	C	L2c	LINE/L2	(407)	2968	2955	18636
1907	20.9	9.1	3.4	chr1	13697624	13698098	(235258324)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	21923
403	6.7	0.0	0.0	chr1	31431749	31432232	(217524190)	+	(GATAGGGTG)n	Simple_repeat	1	484	(0)	60677
222	28.4	5.0	0.0	chr1	31902066	31902160	(217054262)	C	L2a	LINE/L2	(1201)	2218	2119	61592
1761	18.6	10.1	3.3	chr1	31902165	31902615	(217053807)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	21	61594
1236	24.1	16.4	6.0	chr1	31902648	31902718	(217053704)	C	L2a	LINE/L2	(1298)	2121	2043	61592
12	11.1	0.0	8.6	chr1	32973105	32973139	(215983283)	+	(GCCCCC)n	Simple_repeat	1	35	(0)	64134
12	16.5	0.0	0.0	chr1	32973206	32973232	(215983190)	+	G-rich	Low_complexity	1	27	(0)	64135
22	12.8	0.0	0.0	chr1	32973436	32973469	(215982953)	+	(T)n	Simple_repeat	1	34	(0)	64136
7234	10.2	1.0	1.4	chr1	33453279	33453464	(215502958)	+	L1MA2	LINE/L1	6157	6304	(0)	65130
625	20.4	6.4	0.7	chr1	33453483	33453670	(215502752)	+	MLT1D	LTR/ERVL-MaLR	251	505	(0)	65125
204	17.5	0.0	0.0	chr1	33453695	33453734	(215502688)	+	L2a	LINE/L2	3386	3425	(1)	65133
1972	22.6	6.9	2.7	chr1	40842572	40843053	(208113369)	+	MLT1D	LTR/ERVL-MaLR	1	504	(1)	79606
2691	27.5	5.1	5.8	chr1	40843054	40843134	(208113288)	C	ERVL-E-int	LTR/ERVL	(932)	4735	4658	79604
2305	27.8	1.5	0.0	chr1	40843127	40843705	(208112717)	C	ERVL-E-int	LTR/ERVL	(1368)	4299	3712	79604
1227	24.1	9.5	1.9	chr1	47163911	47164328	(201792094)	C	MLT1D	LTR/ERVL-MaLR	(52)	453	1	91021
334	33.0	5.8	6.2	chr1	57810540	57810765	(191145657)	+	L2c	LINE/L2	3040	3264	(123)	111566
1757	22.7	7.2	2.7	chr1	57810785	57811196	(191145226)	C	MLT1D	LTR/ERVL-MaLR	(2)	503	66	111567
1852	23.2	6.1	5.8	chr1	59574043	59574545	(189381877)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	115101
1955	20.9	8.1	1.3	chr1	63586711	63587180	(185369242)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	122298
1356	23.1	13.9	2.7	chr1	65523742	65524186	(183432236)	+	MLT1D	LTR/ERVL-MaLR	1	503	(2)	125935
822	19.8	1.1	5.0	chr1	67078676	67078857	(181877565)	C	AluJb	SINE/Alu	(9)	303	129	128187
33	0.0	0.0	0.0	chr1	67078861	67078891	(181877531)	+	(TGTTT)n	Simple_repeat	1	31	(0)	128188
28782	0.3	0.1	0.2	chr1	67078892	67084915	(181871507)	C	L1HS	LINE/L1	(10)	6145	126	128189
1890	20.9	1.0	13.1	chr1	68463435	68464007	(180492415)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	3	130699
1471	21.6	12.5	2.9	chr1	82023504	82023951	(166932471)	+	MLT1D	LTR/ERVL-MaLR	7	503	(2)	149260
1547	23.8	5.2	3.5	chr1	84797240	84797693	(164158729)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	6	153099
1488	24.0	8.3	3.8	chr1	109815726	109816205	(139140217)	+	MLT1D	LTR/ERVL-MaLR	2	505	(0)	189133
1235	27.1	7.4	4.0	chr1	109950197	109950821	(139005601)	C	L2a	LINE/L2	(0)	3426	2776	189339
12	27.4	2.0	2.0	chr1	115641680	115641729	(133314693)	+	(GTGT)n	Simple_repeat	1	51	(0)	198479
14	23.5	4.3	4.1	chr1	115641866	115641935	(133314487)	+	(GGCTG)n	Simple_repeat	1	73	(0)	198480
15	26.0	3.3	1.6	chr1	115641931	115641991	(133314431)	+	(GGCAGC)n	Simple_repeat	1	63	(0)	198481
13	4.8	4.5	0.0	chr1	115641973	115641994	(133314428)	+	(GCG)n	Simple_repeat	1	23	(0)	198482
13	22.3	4.3	5.5	chr1	115642016	115642085	(133314337)	+	(CGCGGAC)n	Simple_repeat	1	73	(0)	198483
45	2.3	0.0	0.0	chr1	117367314	117367358	(131589064)	+	(GAG)n	Simple_repeat	1	45	(0)	201206
1337	25.8	8.9	3.4	chr1	120133287	120133875	(128822547)	C	L2a	LINE/L2	(0)	3426	2804	205066
5580	13.1	1.8	1.4	chr1	120133887	120135389	(128821033)	C	L1PB3	LINE/L1	(2)	6152	4643	205067
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
2429	16.6	7.9	2.1	chr1	150191091	150191565	(98764857)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	218485
443	26.6	4.0	9.7	chr1	154559240	154559476	(94396946)	+	MIRc	SINE/MIR	20	242	(26)	226416
32	13.5	0.0	3.2	chr1	155562416	155562477	(93393945)	+	(GGC)n	Simple_repeat	1	62	(0)	228300
27	5.6	0.0	2.6	chr1	155562800	155562838	(93393584)	+	(CCT)n	Simple_repeat	1	39	(0)	228301
18	31.1	1.2	2.3	chr1	155562840	155562848	(93393574)	+	(CCCCCG)n	Simple_repeat	1	22	(65)	228302
23	17.6	0.0	3.6	chr1	155562849	155562903	(93393519)	+	(CCG)n	Simple_repeat	1	55	(0)	228303
18	31.1	1.2	2.3	chr1	155562904	155562925	(93393497)	+	(CCCCCG)n	Simple_repeat	23	87	(0)	228302
14	16.7	0.0	5.3	chr1	155688320	155688357	(93268065)	+	(GGC)n	Simple_repeat	1	38	(0)	228557
1730	20.5	9.3	5.0	chr1	161987239	161987720	(86968702)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	238419
2481	14.5	5.4	7.2	chr1	162160793	162161305	(86795117)	C	MLT1D	LTR/ERVL-MaLR	(2)	503	1	238678
1221	16.1	3.7	0.4	chr1	167338712	167338948	(81617474)	C	L1MB4	LINE/L1	(314)	5866	5622	246548
1165	21.7	12.2	7.7	chr1	167338949	167339377	(81617045)	C	MLT1D	LTR/ERVL-MaLR	(51)	454	4	246549
1544	19.9	14.3	6.7	chr1	168223310	168223772	(80732650)	C	MLT1D	LTR/ERVL-MaLR	(1)	504	1	248041
1688	4.9	0.0	3.5	chr1	169550129	169550359	(79406063)	C	L1PA5	LINE/L1	(0)	6154	5932	250097
1355	21.9	13.3	5.6	chr1	170548020	170548483	(78407939)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	251461
1931	22.1	10.6	2.5	chr1	182897519	182898001	(66058421)	+	MLT1E2	LTR/ERVL-MaLR	101	627	(0)	270219
1048	24.3	10.8	4.3	chr1	184936433	184936896	(64019526)	C	MLT1D	LTR/ERVL-MaLR	(6)	499	2	273457
455	13.8	6.0	5.0	chr1	202624116	202625415	(46331007)	+	(GT)n	Simple_repeat	1	1378	(0)	298201
2061	21.9	4.6	2.2	chr1	206033259	206033749	(42922673)	C	MLT1D	LTR/ERVL-MaLR	(2)	503	1	304461
412	21.6	3.0	2.9	chr1	206923601	206924793	(42031629)	+	(GT)n	Simple_repeat	1	1229	(0)	305929
2485	20.9	0.4	2.9	chr1	221151061	221151578	(27804844)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	327228
1987	14.1	1.1	1.1	chr1	224011691	224016553	(24939869)	+	(AATGG)n	Simple_repeat	1	4914	(0)	331634
13	19.2	1.6	9.2	chr1	224929879	224929942	(24026480)	+	(GGCG)n	Simple_repeat	1	65	(0)	333381
1135	22.8	8.1	11.9	chr1	226461956	226462369	(22494053)	+	MLT1D	LTR/ERVL-MaLR	42	437	(68)	335949
1934	11.0	7.8	0.0	chr1	226462370	226462641	(22493781)	C	AluSz6	SINE/Alu	(17)	295	1	335950
2326	16.9	8.0	1.3	chr1	226822632	226823099	(22133323)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	4	336540
329	28.5	6.8	0.7	chr1	230588920	230589057	(18367365)	+	L1ME4c	LINE/L1	5971	6117	(7)	342120
4942	24.4	8.4	10.0	chr1	231977075	231977209	(16979213)	C	L1MC5a	LINE/L1	(15)	2762	2625	344333
2639	16.6	4.2	1.8	chr1	231977210	231977699	(16978723)	C	MLT1D	LTR/ERVL-MaLR	(2)	503	2	344334
559	29.3	1.9	4.7	chr1	234781964	234782178	(14174244)	+	MamRep1879	DNA/hAT-Tip100?	8	216	(0)	348428
885	23.4	1.4	1.9	chr1	234782180	234782388	(14174034)	+	MIRb	SINE/MIR	55	262	(6)	348429
1080	23.0	6.8	3.3	chr1	235007838	235008191	(13948231)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	110	348824
2884	18.1	4.6	3.8	chr1	235008199	235008569	(13947853)	+	L1MB3	LINE/L1	5518	5883	(300)	348825
246	19.8	4.9	0.9	chr1	235078154	235078768	(13877654)	+	(TG)n	Simple_repeat	1	645	(0)	348979
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
2061	20.6	5.6	2.5	chr1	237313230	237313717	(11642705)	+	MLT1D	LTR/ERVL-MaLR	1	504	(1)	353112
20	14.4	0.0	0.0	chr1	244633619	244633650	(4322772)	+	(CA)n	Simple_repeat	1	32	(0)	364478
30	0.0	0.0	0.0	chr1	244863396	244863421	(4093001)	+	(AC)n	Simple_repeat	1	26	(0)	364910
17	20.4	2.1	2.1	chr1	244863617	244863663	(4092759)	+	(CCG)n	Simple_repeat	1	48	(0)	364911
14	31.3	0.0	0.0	chr1	244863779	244863829	(4092593)	+	(GCT)n	Simple_repeat	1	51	(0)	364912
1885	19.2	10.3	1.2	chr10	1054706	1055127	(132742295)	+	MLT1C	LTR/ERVL-MaLR	1	465	(2)	372228
238	29.8	15.3	3.6	chr10	1055133	1055299	(132742123)	+	MIR	SINE/MIR	20	209	(53)	372229
1469	21.9	13.4	0.7	chr10	14719527	14719973	(119077449)	+	LTR33A	LTR/ERVL	4	516	(4)	392947
26	14.9	3.3	1.6	chr10	19816105	19816165	(113981257)	+	G-rich	Low_complexity	1	63	(0)	401152
18	23.8	0.0	0.0	chr10	19816365	19816401	(113981021)	+	(T)n	Simple_repeat	1	37	(0)	401153
12	23.9	0.0	7.1	chr10	24722820	24722875	(109074547)	+	G-rich	Low_complexity	1	56	(0)	408953
38	10.4	0.0	0.0	chr10	42165831	42165892	(91631530)	+	(GAATG)n	Simple_repeat	1	62	(0)	431764
85	9.6	1.3	1.3	chr10	42165959	42166108	(91631314)	+	(GGAAT)n	Simple_repeat	1	152	(0)	431765
1433	11.3	4.4	3.2	chr10	43407937	43408183	(90389239)	C	AluJb	SINE/Alu	(23)	289	40	433436
24	27.6	5.6	1.8	chr10	46106989	46107149	(87690273)	+	(TC)n	Simple_repeat	1	167	(0)	437211
783	23.1	12.0	7.2	chr10	46198472	46198859	(87598563)	C	MLT1C	LTR/ERVL-MaLR	(5)	462	54	437337
1597	22.4	7.3	3.5	chr10	63462424	63462880	(70334542)	+	MLT1D	LTR/ERVL-MaLR	1	476	(29)	461837
1402	22.2	10.7	4.9	chr10	75270630	75271102	(58526320)	C	MLT1D	LTR/ERVL-MaLR	(1)	504	1	482796
13	13.2	0.0	0.0	chr10	75403419	75403443	(58393979)	+	(GAGG)n	Simple_repeat	1	25	(0)	483057
3775	16.4	8.1	0.5	chr10	90469672	90469955	(43327467)	+	L1MB1	LINE/L1	5796	6113	(55)	505899
5632	19.8	5.3	4.2	chr10	90469937	90470216	(43327206)	C	L1MC3	LINE/L1	(1067)	6718	6442	505901
1764	21.4	7.6	2.9	chr10	90470217	90470693	(43326729)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	5	505902
2361	17.6	2.6	3.5	chr10	92846723	92847230	(40950192)	+	MLT1D	LTR/ERVL-MaLR	3	505	(0)	510019
355	32.5	6.9	3.5	chr10	92847238	92847406	(40950016)	C	MIR	SINE/MIR	(84)	178	4	510020
19	27.1	4.0	0.0	chr10	101062594	101062669	(32734753)	+	(GCTGCC)n	Simple_repeat	1	79	(0)	524410
362	24.6	13.3	0.1	chr10	102449202	102449328	(31348094)	C	MIRc	SINE/MIR	(97)	171	31	526947
1714	20.8	6.2	4.4	chr10	111068243	111068700	(22728722)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	540543
2344	14.6	3.9	3.5	chr10	116736450	116736903	(17060519)	+	MLT1D	LTR/ERVL-MaLR	47	502	(3)	549265
1493	22.6	10.7	7.8	chr10	118123343	118123831	(15673591)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	551589
1538	20.8	8.7	5.0	chr10	119863875	119864359	(13933063)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	554707
2088	24.1	15.6	5.7	chr10	119864360	119865279	(13932143)	C	L1ME1	LINE/L1	(2729)	3417	2380	554704
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
799	23.4	10.2	7.8	chr11	2424410	2424793	(132661829)	+	MLT1C	LTR/ERVL-MaLR	35	428	(39)	575784
1503	21.5	14.3	2.4	chr11	2907230	2907639	(132178983)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	576306
2048	23.2	3.5	2.7	chr11	11028452	11028938	(124057684)	+	MLT1D	LTR/ERVL-MaLR	1	491	(14)	588555
82	12.4	0.7	1.4	chr11	11978384	11978522	(123108100)	+	(CTT)n	Simple_repeat	1	140	(0)	590022
1829	15.9	3.0	0.7	chr11	14226351	14226642	(120859980)	C	Tigger5	DNA/TcMar-Tigger	(2107)	299	1	593504
1725	20.3	13.4	2.3	chr11	14226706	14227143	(120859479)	C	MLT1D	LTR/ERVL-MaLR	(9)	496	3	593505
2154	13.3	0.0	1.3	chr11	18638768	18639075	(116447547)	+	AluSx	SINE/Alu	1	304	(8)	600937
1700	18.1	2.3	11.6	chr11	18639076	18639371	(116447251)	+	MLT1B	LTR/ERVL-MaLR	111	390	(0)	600935
25	21.4	0.0	0.0	chr11	36309951	36310005	(98776617)	+	(CCA)n	Simple_repeat	1	55	(0)	628227
1604	12.6	0.0	6.9	chr11	47214511	47214787	(87871835)	+	AluJo	SINE/Alu	42	299	(13)	645475
21	16.7	4.7	3.0	chr11	47980765	47980835	(87105787)	+	(GGCGGA)n	Simple_repeat	1	72	(0)	647277
12	18.2	4.6	7.3	chr11	47980942	47980959	(87105663)	+	(GCCTGC)n	Simple_repeat	1	42	(26)	647278
21	5.5	7.9	0.0	chr11	47980960	47980997	(87105625)	+	(GCT)n	Simple_repeat	1	41	(0)	647279
12	18.2	4.6	7.3	chr11	47980998	47981006	(87105616)	+	(GCCTGC)n	Simple_repeat	43	68	(0)	647278
10036	10.9	4.2	1.7	chr11	59676706	59678195	(75408427)	C	Tigger1	DNA/TcMar-Tigger	(868)	1550	22	657217
1675	22.3	7.5	3.7	chr11	59678224	59678632	(75407990)	C	MLT1D	LTR/ERVL-MaLR	(74)	431	6	657218
4651	18.4	1.7	0.1	chr11	62115609	62116496	(72970126)	C	Cheshire	DNA/hAT-Charlie	(612)	1808	907	661529
1275	20.2	12.4	3.9	chr11	62116497	62116878	(72969744)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	49	661533
1982	20.3	3.8	5.5	chr11	66610140	66610650	(68475972)	C	MLT1D	LTR/ERVL-MaLR	(3)	502	1	669913
2165	20.8	5.0	3.6	chr11	69848963	69849460	(65237162)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	675837
2300	12.3	0.3	0.0	chr11	69916565	69916873	(65169749)	+	AluSx3	SINE/Alu	2	311	(0)	675954
772	19.5	1.9	0.0	chr11	69916883	69917036	(65169586)	C	MLT1D	LTR/ERVL-MaLR	(110)	395	239	675952
47	9.2	5.3	0.0	chr11	69917050	69917143	(65169479)	+	(CT)n	Simple_repeat	1	99	(0)	675955
1069	23.6	13.1	5.9	chr11	70371122	70371431	(64715191)	C	L1MD	LINE/L1	(3227)	2919	2548	676745
616	22.2	3.5	4.0	chr11	70371541	70371742	(64714880)	C	L1M4	LINE/L1	(3463)	2683	2483	676741
2172	14.3	0.9	0.6	chr11	71496272	71496609	(63590013)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	678357
829	24.9	7.0	11.5	chr11	71496610	71496863	(63589759)	C	MLT1C	LTR/ERVL-MaLR	(144)	323	92	678356
2305	19.8	6.0	1.5	chr11	75312521	75313001	(59773621)	+	MLT1D	LTR/ERVL-MaLR	1	504	(1)	685760
458	20.9	7.0	6.1	chr11	75313002	75313070	(59773552)	C	MIRb	SINE/MIR	(104)	164	92	685759
2184	11.2	0.7	0.0	chr11	75313071	75313365	(59773257)	+	AluSz	SINE/Alu	1	297	(15)	685761
1167	20.6	17.1	8.3	chr11	93501312	93501767	(41584855)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	2	715655
346	33.2	7.0	1.4	chr11	110371572	110371741	(24714881)	C	L1MEd	LINE/L1	(2272)	235	52	739742
1705	20.1	15.2	1.8	chr11	110371742	110372177	(24714445)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	739749
32	27.5	0.8	4.0	chr11	113314454	113314577	(21772045)	+	(CCCGGC)n	Simple_repeat	1	125	(0)	744365
1807	18.8	11.5	3.2	chr11	122669099	122669560	(12417062)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	760002
17	14.0	5.0	0.0	chr11	126464575	126464618	(8622004)	+	A-rich	Low_complexity	1	46	(0)	766127
938	22.1	13.2	0.1	chr11	126464619	126464885	(8621737)	+	MLT1C	LTR/ERVL-MaLR	178	463	(4)	766125
1222	26.4	5.0	1.4	chr11	130007597	130007961	(5078661)	+	MLT1C	LTR/ERVL-MaLR	86	464	(3)	771162
548	2.3	1.2	1.4	chr12	10001	10585	(133264724)	+	(CTAACC)n	Simple_repeat	1	592	(0)	778084
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
1560	19.1	8.0	4.0	chr12	6027466	6027837	(127247472)	+	MLT1D	LTR/ERVL-MaLR	118	505	(0)	787882
41	2.6	0.0	0.0	chr12	6027844	6027883	(127247426)	+	(AC)n	Simple_repeat	1	40	(0)	787883
332	32.7	6.2	3.2	chr12	6027917	6028134	(127247175)	+	L3	LINE/CR1	3829	4053	(46)	787884
2423	19.3	3.8	1.6	chr12	14031690	14032183	(119243126)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	800666
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
237	37.0	2.8	1.4	chr12	17097913	17098052	(116177257)	C	MLT1J-int	LTR/ERVL-MaLR	(876)	511	370	805100
1333	22.2	7.7	2.1	chr12	18909412	18909793	(114365516)	C	MLT1C	LTR/ERVL-MaLR	(4)	463	59	807239
1035	27.0	4.9	4.0	chr12	29940339	29940785	(103334524)	+	MLT1C	LTR/ERVL-MaLR	1	451	(16)	823053
1973	23.5	3.8	1.8	chr12	44870432	44870926	(88404383)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	840004
274	34.3	8.3	1.1	chr12	44870987	44871215	(88404094)	+	L2b	LINE/L2	2917	3162	(225)	840013
1561	18.6	10.6	4.5	chr12	45492871	45493338	(87781971)	C	MLT1D	LTR/ERVL-MaLR	(5)	500	1	840881
2524	5.9	0.3	1.3	chr12	48734720	48735026	(84540283)	+	AluYk3	SINE/Alu	1	304	(7)	845667
1712	15.7	4.3	8.6	chr12	48735039	48735325	(84539984)	+	MLT1E2	LTR/ERVL-MaLR	280	570	(57)	845666
1464	23.9	7.2	2.7	chr12	49286171	49286609	(83988700)	+	MLT1C	LTR/ERVL-MaLR	1	460	(7)	846875
31	0.0	0.0	0.0	chr12	49286632	49286660	(83988649)	+	(TTA)n	Simple_repeat	1	29	(0)	846876
1047	9.0	0.0	0.0	chr12	49286679	49286811	(83988498)	C	AluSp	SINE/Alu	(180)	133	1	846877
1113	26.4	14.5	2.3	chr12	89011079	89011520	(44263789)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	906321
4343	15.3	4.9	2.8	chr12	95883859	95884519	(37390790)	+	L1MD1	LINE/L1	3907	4583	(1563)	918064
1785	19.9	10.1	4.6	chr12	95884520	95884957	(37390352)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	3	918065
2430	7.7	0.0	0.7	chr12	104480298	104480597	(28794712)	+	AluSg4	SINE/Alu	3	300	(10)	932672
1701	22.2	7.2	4.2	chr12	104480598	104480936	(28794373)	+	MLT1C	LTR/ERVL-MaLR	124	467	(0)	932671
296	28.3	7.8	0.9	chr12	104480986	104481092	(28794217)	+	MIRc	SINE/MIR	36	150	(118)	932673
400	29.9	8.6	3.7	chr12	104481134	104481380	(28793929)	+	L2a	LINE/L2	2843	3107	(319)	932674
1335	24.9	10.5	2.0	chr12	105340628	105341086	(27934223)	+	MLT1D	LTR/ERVL-MaLR	3	505	(0)	934196
12	9.7	0.0	0.0	chr12	112381753	112381774	(20893535)	+	(GGAG)n	Simple_repeat	1	22	(0)	949063
36	2.7	0.0	0.0	chr12	113080590	113080627	(20194682)	+	(GAATG)n	Simple_repeat	1	38	(0)	950746
12	8.7	0.0	3.6	chr12	113080628	113080649	(20194660)	+	(GAATA)n	Simple_repeat	1	21	(0)	950747
1954	15.0	0.7	0.3	chr12	113080696	113080989	(20194320)	+	AluJo	SINE/Alu	3	297	(15)	950748
388	33.8	0.8	0.0	chr12	115676145	115676286	(17599023)	C	MIR3	SINE/MIR	(78)	152	10	956527
1451	24.3	2.6	6.6	chr12	115676315	115676799	(17598510)	C	MLT1C	LTR/ERVL-MaLR	(2)	465	1	956528
1494	22.4	6.5	7.2	chr12	119895859	119896195	(13379114)	C	MLT1D	LTR/ERVL-MaLR	(9)	496	158	965734
1713	16.8	5.3	0.0	chr12	119896196	119896480	(13378829)	+	AluJb	SINE/Alu	1	301	(11)	965735
5481	19.8	5.5	5.4	chr12	121072457	121072731	(12202578)	+	L1MB7	LINE/L1	1116	1381	(6136)	968530
1767	21.5	4.5	1.8	chr12	121072732	121073185	(12202124)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	968532
5481	19.8	5.5	5.4	chr12	121073186	121073591	(12201718)	+	L1MB7	LINE/L1	1382	1812	(5705)	968530
1499	23.7	8.3	3.0	chr12	121229594	121230028	(12045281)	C	MLT1C	LTR/ERVL-MaLR	(7)	460	1	968913
182	34.2	2.6	3.4	chr12	122151986	122152103	(11123206)	C	L2b	LINE/L2	(243)	3132	3016	971181
643	35.5	9.2	2.9	chr12	122152317	122152475	(11122834)	+	L2	LINE/L2	2481	2640	(779)	971182
1141	21.5	14.4	5.3	chr12	122838632	122839044	(10436265)	+	MLT1D	LTR/ERVL-MaLR	49	505	(0)	972813
2127	12.6	0.3	0.0	chr12	123067499	123067512	(10207797)	+	AluSq2	SINE/Alu	282	295	(18)	973250
1780	18.2	7.2	7.2	chr12	123067513	123067781	(10207528)	+	MLT1C	LTR/ERVL-MaLR	186	467	(0)	973249
344	30.5	12.9	2.7	chr12	123074063	123074262	(10201047)	+	MIRc	SINE/MIR	8	232	(36)	973263
90	25.3	3.2	1.4	chr12	123074379	123074655	(10200654)	+	(CA)n	Simple_repeat	1	286	(0)	973264
1553	17.8	7.3	13.0	chr12	123527673	123527975	(9747334)	+	MLT1D	LTR/ERVL-MaLR	119	425	(80)	974316
1957	13.0	2.4	1.4	chr12	124552693	124552985	(8722324)	C	AluJr	SINE/Alu	(16)	296	1	976265
1601	19.4	8.3	9.2	chr12	124552986	124553408	(8721901)	C	MLT1D	LTR/ERVL-MaLR	(62)	443	1	976264
1799	23.6	5.8	0.7	chr12	124606337	124606779	(8668530)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	976389
2165	11.1	0.3	0.0	chr12	124606874	124607161	(8668148)	+	AluSx1	SINE/Alu	1	289	(23)	976390
501	31.2	7.4	2.6	chr12	124739641	124739870	(8535439)	+	MLT1K	LTR/ERVL-MaLR	62	303	(292)	976717
2214	16.6	5.9	2.5	chr12	124739895	124740338	(8534971)	C	MLT1D	LTR/ERVL-MaLR	(45)	460	1	976718
2024	17.6	8.6	4.2	chr12	124896069	124896544	(8378765)	C	MLT1D	LTR/ERVL-MaLR	(6)	499	1	977096
1522	23.6	6.0	2.9	chr12	125015121	125015569	(8259740)	+	MLT1C	LTR/ERVL-MaLR	4	467	(0)	977384
301	31.3	13.3	3.2	chr12	125328063	125328372	(7946937)	+	L2a	LINE/L2	2736	3081	(338)	978044
841	22.5	14.2	1.7	chr12	125328441	125328730	(7946579)	C	MLT1C	LTR/ERVL-MaLR	(64)	403	72	978046
689	24.7	10.8	1.3	chr12	128472892	128473117	(4802192)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	218	983244
1051	23.0	12.6	5.7	chr12	128781120	128781433	(4493876)	+	MLT1C	LTR/ERVL-MaLR	110	458	(9)	983861
1619	21.6	8.9	5.4	chr13	27282612	27283056	(87081272)	+	MLT1C	LTR/ERVL-MaLR	6	467	(0)	1004641
586	20.1	12.0	2.9	chr13	39152593	39152766	(75211562)	+	ERVL-B4-int	LTR/ERVL	2736	2927	(2787)	1022226
793	24.9	17.4	3.4	chr13	39152786	39153168	(75211160)	+	MLT1D	LTR/ERVL-MaLR	55	502	(3)	1022227
2437	22.1	6.8	2.2	chr13	39680439	39681026	(74683302)	C	MLT1E2	LTR/ERVL-MaLR	(8)	619	3	1023008
1414	23.0	12.5	3.5	chr13	44205822	44206277	(70158051)	+	MLT1D	LTR/ERVL-MaLR	1	503	(2)	1029923
12	15.3	5.3	2.5	chr13	48975985	48976022	(65388306)	+	(GCGGAG)n	Simple_repeat	1	40	(0)	1037665
1786	18.9	6.0	5.4	chr13	51520680	51521142	(62843186)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	2	1041718
2252	20.8	1.9	2.9	chr13	61908845	61909329	(52454999)	+	MLT1D	LTR/ERVL-MaLR	5	484	(21)	1055348
1790	23.9	1.1	4.2	chr13	65963109	65963585	(48400743)	+	MLT1D	LTR/ERVL-MaLR	42	503	(2)	1060448
1176	22.8	11.7	2.8	chr13	66094900	66095224	(48269104)	+	MLT1D	LTR/ERVL-MaLR	148	505	(0)	1060609
677	24.1	7.7	3.9	chr13	66095225	66095317	(48269011)	+	MLT1D-int	LTR/ERVL-MaLR	1	92	(1279)	1060609
2382	7.9	0.4	0.0	chr13	66095318	66095641	(48268687)	C	AluY	SINE/Alu	(0)	311	1	1060610
1246	19.1	1.7	2.5	chr13	66168458	66168699	(48195629)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	266	1060703
1626	21.4	7.5	4.5	chr13	72321530	72322018	(42042310)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	1068633
1852	19.2	5.3	4.5	chr13	74161225	74161687	(40202641)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	1071598
911	22.8	13.0	3.8	chr13	75538434	75538830	(38825498)	C	L1MC4	LINE/L1	(0)	8042	7604	1073517
1167	21.6	8.0	11.2	chr13	75538906	75539229	(38825099)	C	MLT1E2	LTR/ERVL-MaLR	(186)	441	129	1073518
1880	18.8	9.1	5.0	chr13	75782526	75783007	(38581321)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	2	1073877
326	37.0	8.6	1.5	chr13	75783008	75783021	(38581307)	+	MIRb	SINE/MIR	241	253	(15)	1073876
2705	27.4	6.1	0.6	chr13	77455360	77456325	(36908003)	+	L1M5	LINE/L1	2179	3200	(2946)	1076232
45	12.1	0.0	0.0	chr13	77456537	77456608	(36907720)	+	(TCCT)n	Simple_repeat	1	72	(0)	1076233
1589	16.9	2.0	0.7	chr13	79480531	79480822	(34883506)	+	L1MC1	LINE/L1	6016	6311	(22)	1079006
1891	20.4	3.3	1.2	chr13	80222815	80223231	(34141097)	C	MLT1D	LTR/ERVL-MaLR	(13)	492	67	1079979
1131	27.5	5.1	3.2	chr13	81336290	81336737	(33027591)	+	MLT1C	LTR/ERVL-MaLR	17	505	(0)	1081431
1234	32.8	12.3	4.1	chr13	86032275	86032514	(28331814)	+	L2a	LINE/L2	2318	2595	(824)	1087271
1625	23.4	5.2	4.2	chr13	86032515	86033014	(28331314)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	1087273
1038	24.3	4.5	3.6	chr13	88624674	88625028	(25739300)	+	MLT1D	LTR/ERVL-MaLR	110	503	(2)	1090543
1049	24.1	12.4	8.5	chr13	95266054	95266525	(19097803)	+	MLT1D	LTR/ERVL-MaLR	13	505	(0)	1099661
264	32.5	3.2	1.6	chr13	95266530	95266651	(19097677)	C	MIR	SINE/MIR	(111)	151	28	1099662
268	9.3	0.0	0.0	chr13	95266794	95266832	(19097496)	+	THE1A	LTR/ERVL-MaLR	1	39	(336)	1099663
2150	13.8	4.1	4.4	chr13	95266841	95266879	(19097449)	+	THE1B	LTR/ERVL-MaLR	1	37	(327)	1099664
2172	8.0	3.0	4.0	chr13	95266880	95267181	(19097147)	C	AluSq2	SINE/Alu	(14)	299	1	1099665
14	19.7	4.2	2.0	chr13	99441783	99441830	(14922498)	+	(ATTAT)n	Simple_repeat	1	50	(0)	1106246
874	23.0	10.9	1.8	chr13	99441834	99442108	(14922220)	+	MLT1C	LTR/ERVL-MaLR	158	460	(7)	1106247
1082	23.1	5.0	0.0	chr13	99442125	99442427	(14921901)	+	Charlie4a	DNA/hAT-Charlie	162	480	(28)	1106248
815	21.9	8.6	0.2	chr14	34923556	34923715	(72120003)	C	MLT1D	LTR/ERVL-MaLR	(128)	526	253	1148945
590	15.8	13.0	0.9	chr14	34923716	34923830	(72119888)	+	MSTC	LTR/ERVL-MaLR	1	131	(297)	1148946
400	30.6	9.2	6.8	chr14	52349862	52350066	(54693652)	+	MLT1O	LTR/ERVL-MaLR	135	334	(208)	1172826
1782	17.1	16.3	3.7	chr14	52350067	52350502	(54693216)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	4	1172827
2099	17.7	7.4	5.7	chr14	64720664	64721155	(42322563)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	5	1191821
14	3.2	12.5	0.0	chr14	75277104	75277135	(31766583)	+	(GCGGCC)n	Simple_repeat	1	36	(0)	1210109
1498	16.8	8.2	3.1	chr14	76587664	76587982	(30455736)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	169	1212539
1797	15.8	9.8	9.8	chr14	76587983	76588080	(30455638)	+	MLT2C2	LTR/ERVL	1	86	(378)	1212540
135	1.6	0.8	0.0	chr14	77269669	77269795	(29773923)	+	(TC)n	Simple_repeat	1	128	(0)	1213918
25	0.0	0.0	0.0	chr14	77269796	77269822	(29773896)	+	(C)n	Simple_repeat	1	27	(0)	1213919
529	28.8	2.5	2.5	chr14	77269823	77269979	(29773739)	C	MIR	SINE/MIR	(43)	219	63	1213920
550	22.6	0.0	6.1	chr14	77876041	77876053	(29167665)	C	MER58B	DNA/hAT-Charlie	(19)	322	311	1215195
1904	19.3	10.9	6.2	chr14	77876054	77876533	(29167185)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	1215196
1939	17.8	9.7	7.1	chr14	91260793	91261239	(15782479)	+	MLT1D	LTR/ERVL-MaLR	40	505	(0)	1235422
1968	19.3	8.8	1.5	chr14	94135493	94135888	(12907830)	+	MLT1D	LTR/ERVL-MaLR	72	500	(5)	1240685
31	0.0	0.0	0.0	chr14	99420948	99420976	(7622742)	+	(G)n	Simple_repeat	1	29	(0)	1250017
1145	21.2	9.7	8.9	chr14	99558647	99558796	(7484922)	+	MLT1C	LTR/ERVL-MaLR	154	316	(151)	1250201
2378	13.5	4.7	1.4	chr14	99558797	99559210	(7484508)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	1250203
359	24.2	6.2	0.0	chr14	103327263	103327382	(3716336)	C	MER102c	DNA/hAT-Charlie	(121)	210	83	1256576
2251	6.7	4.8	1.1	chr15	20340242	20344102	(81647087)	+	(AGCCAGCCA)n	Simple_repeat	1	4048	(0)	1263201
2170	11.3	0.0	0.0	chr15	66334383	66334673	(35656516)	+	AluSg7	SINE/Alu	1	291	(18)	1334450
2061	21.5	1.6	9.0	chr15	66667848	66668294	(35322895)	+	MLT1D	LTR/ERVL-MaLR	1	406	(99)	1335212
1985	13.7	1.4	0.0	chr15	66668295	66668611	(35322578)	C	AluSx	SINE/Alu	(0)	312	1	1335213
2200	21.2	2.0	5.2	chr15	66681308	66681828	(35309361)	+	MLT1D	LTR/ERVL-MaLR	2	505	(0)	1335241
324	26.5	7.7	4.3	chr15	70191597	70191734	(31799455)	+	MIR3	SINE/MIR	3	145	(63)	1341669
1875	19.9	4.3	4.3	chr15	70191761	70192253	(31798936)	C	MLT1D	LTR/ERVL-MaLR	(8)	497	5	1341670
2041	19.1	7.6	4.5	chr15	70572020	70572490	(31418699)	+	MLT1D	LTR/ERVL-MaLR	3	489	(16)	1342397
251	30.5	17.3	0.0	chr15	77699142	77699309	(24291880)	+	MIR3	SINE/MIR	55	263	(5)	1354493
185	35.2	3.3	3.3	chr15	77699788	77699878	(24291311)	+	L2c	LINE/L2	3293	3383	(4)	1354494
21	23.6	0.0	3.3	chr15	77777952	77778012	(24213177)	+	GA-rich	Low_complexity	1	61	(0)	1354647
1337	22.6	9.0	2.7	chr15	77778015	77778428	(24212761)	C	MLT1D	LTR/ERVL-MaLR	(62)	443	1	1354645
1700	13.9	8.8	2.3	chr15	78247309	78247574	(23743615)	+	AluJo	SINE/Alu	1	285	(27)	1355500
17	4.3	0.0	0.0	chr15	78247575	78247598	(23743591)	+	(GGGA)n	Simple_repeat	1	24	(0)	1355501
1091	18.4	6.2	2.1	chr15	78247603	78247835	(23743354)	+	MLT1D	LTR/ERVL-MaLR	263	505	(0)	1355499
262	28.3	8.0	2.1	chr15	78247913	78248006	(23743183)	C	L2b	LINE/L2	(14)	3412	3272	1355502
855	17.8	21.1	3.2	chr15	81401061	81401339	(20589850)	C	MLT1D	LTR/ERVL-MaLR	(162)	343	2	1361218
2372	16.2	8.8	1.9	chr15	82836899	82837363	(19153826)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	6	1363548
1801	22.3	7.5	5.7	chr15	89815765	89816259	(12174930)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	1374934
1846	20.6	9.1	3.8	chr15	93046041	93046515	(8944674)	+	MLT1D	LTR/ERVL-MaLR	1	503	(2)	1380924
1574	21.6	5.2	1.5	chr15	99578674	99579063	(2412126)	C	Tigger9b	DNA/TcMar-Tigger	(0)	624	220	1390329
1808	26.1	9.4	4.1	chr15	99579065	99579386	(2411803)	C	L1MC4	LINE/L1	(5111)	1104	738	1390330
178	28.4	1.7	2.3	chr15	100709991	100710622	(1280567)	+	(GTGGAG)n	Simple_repeat	1	643	(0)	1391836
474	25.9	5.5	7.7	chr16	836140	836361	(89501984)	C	L1ME2	LINE/L1	(28)	6136	5920	1395267
2362	21.2	2.9	7.2	chr16	836402	836705	(89501640)	C	L1MD	LINE/L1	(1984)	4162	3852	1395268
17	24.5	0.0	7.7	chr16	914760	914837	(89423508)	+	(TCCC)n	Simple_repeat	1	78	(0)	1395327
883	26.9	7.4	4.6	chr16	1001395	1001787	(89336558)	C	MLT1C	LTR/ERVL-MaLR	(16)	451	47	1395396
293	19.4	4.0	0.0	chr16	1025186	1025257	(89313088)	C	MER2	DNA/TcMar-Tigger	(3)	342	268	1395420
464	31.2	4.2	0.5	chr16	1025755	1025960	(89312385)	C	MER2	DNA/TcMar-Tigger	(130)	215	2	1395420
770	27.5	5.9	2.3	chr16	1266450	1266791	(89071554)	+	MLT1C	LTR/ERVL-MaLR	6	360	(107)	1395653
2339	11.4	0.3	0.0	chr16	1266889	1267196	(89071149)	+	AluSz	SINE/Alu	1	309	(3)	1395654
15	3.8	3.2	6.2	chr16	2340581	2340611	(87997734)	+	(GGC)n	Simple_repeat	1	32	(0)	1397249
12	14.1	3.0	2.9	chr16	3880820	3880852	(86457493)	+	(GCCCCC)n	Simple_repeat	1	34	(0)	1399967
2060	20.4	6.4	0.2	chr16	4221650	4222087	(86116258)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	1400697
53	0.0	0.0	0.0	chr16	4280606	4280650	(86057695)	+	(TG)n	Simple_repeat	1	45	(0)	1400830
1860	16.1	9.7	0.2	chr16	4280661	4281070	(86057275)	C	MLT1D	LTR/ERVL-MaLR	(52)	453	1	1400828
64	12.6	0.8	3.2	chr16	5500073	5500194	(84838151)	+	(CCTC)n	Simple_repeat	1	123	(0)	1403414
35	11.0	0.0	0.0	chr16	5500196	5500255	(84838090)	+	(CATTC)n	Simple_repeat	1	60	(0)	1403415
1598	17.6	0.8	0.4	chr16	5500260	5500521	(84837824)	C	AluJr	SINE/Alu	(49)	263	1	1403416
2473	19.0	5.3	0.0	chr16	8601689	8602166	(81736179)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	1409388
402	29.9	7.7	7.7	chr16	8602167	8602325	(81736020)	C	MIRb	SINE/MIR	(91)	177	13	1409387
552	25.5	11.9	4.4	chr16	9052996	9053356	(81284989)	C	MLT1J2	LTR/ERVL-MaLR	(36)	412	20	1410460
841	33.4	5.9	6.7	chr16	9053374	9053615	(81284730)	+	L2a	LINE/L2	2937	3188	(238)	1410461
1007	23.6	13.0	3.9	chr16	11549836	11550103	(78788242)	+	MLT1D	LTR/ERVL-MaLR	81	388	(117)	1415946
1785	11.2	7.4	0.0	chr16	11550104	11550389	(78787956)	C	AluSz	SINE/Alu	(3)	309	1	1415947
836	22.9	17.0	1.8	chr16	14323512	14323840	(76014505)	C	MLT1D	LTR/ERVL-MaLR	(9)	496	108	1421858
2063	22.4	2.4	4.8	chr16	14346239	14346613	(75991732)	+	MLT1D	LTR/ERVL-MaLR	1	366	(139)	1421918
1047	20.1	2.3	10.9	chr16	14346614	14346942	(75991403)	+	AluJb	SINE/Alu	2	301	(11)	1421919
218	28.0	12.7	0.0	chr16	25759958	25760081	(64578264)	C	MIRc	SINE/MIR	(85)	183	24	1447651
56	1.9	0.0	0.0	chr16	25760102	25760156	(64578189)	+	(CCCTAA)n	Simple_repeat	1	55	(0)	1447654
1878	15.6	1.1	6.7	chr16	25760191	25760423	(64577922)	C	MLT1B	LTR/ERVL-MaLR	(40)	350	123	1447655
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
888	6.7	4.2	0.7	chr16	33340034	33340155	(56998190)	C	LTR13A	LTR/ERVK	(840)	126	1	1462584
316	25.0	0.0	0.0	chr16	34062726	34062789	(56275556)	+	AluYa8	SINE/Alu	223	286	(24)	1463558
390	15.6	3.0	0.0	chr16	34062893	34062956	(56275389)	+	AluYj4	SINE/Alu	224	289	(22)	1463559
377	20.6	0.0	0.0	chr16	34063794	34063861	(56274484)	+	AluYj4	SINE/Alu	224	291	(20)	1463563
330	24.4	1.2	2.4	chr16	34071698	34071779	(56266566)	+	AluJb	SINE/Alu	208	288	(24)	1463578
338	14.9	0.0	0.0	chr16	34085515	34085561	(56252784)	C	AluYj4	SINE/Alu	(39)	272	226	1463590
49	10.2	1.2	0.0	chr16	34085562	34085645	(56252700)	+	(CCATT)n	Simple_repeat	1	85	(0)	1463591
376	15.6	3.0	0.0	chr16	34097527	34097590	(56240755)	C	AluJo	SINE/Alu	(22)	290	225	1463604
45	7.2	2.7	1.3	chr16	34098503	34098577	(56239768)	+	(ATTCC)n	Simple_repeat	1	77	(0)	1463606
325	17.2	3.0	0.0	chr16	34098582	34098645	(56239700)	C	AluYj4	SINE/Alu	(22)	289	224	1463607
26	2.1	7.5	3.5	chr16	34699521	34699573	(55638772)	+	(TGATGATTCCAT)n	Simple_repeat	1	57	(0)	1464055
2371	19.5	5.6	1.4	chr16	67419704	67420186	(22918159)	+	MLT1D	LTR/ERVL-MaLR	2	505	(0)	1501608
2302	11.1	0.0	0.9	chr16	74997844	74998158	(15340187)	+	AluSx	SINE/Alu	1	312	(0)	1515907
283	23.9	6.4	5.4	chr16	74998246	74998338	(15340007)	C	L2b	LINE/L2	(10)	3365	3272	1515908
1545	16.7	7.1	17.0	chr16	75597104	75597460	(14740885)	+	MLT1C	LTR/ERVL-MaLR	5	339	(128)	1517127
3668	13.6	0.0	0.9	chr16	75597461	75597994	(14740351)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	1517128
1728	21.1	6.0	5.2	chr16	77342681	77343070	(12995275)	+	MLT1D	LTR/ERVL-MaLR	1	393	(112)	1519657
2208	12.2	0.0	0.3	chr16	77343071	77343373	(12994972)	C	AluSq2	SINE/Alu	(11)	302	1	1519658
1309	21.3	5.3	11.1	chr16	77576881	77577411	(12760934)	C	MLT1D	LTR/ERVL-MaLR	(0)	680	34	1520083
1937	17.4	8.0	6.3	chr16	84695777	84696267	(5642078)	C	MLT1D	LTR/ERVL-MaLR	(5)	500	1	1533416
2454	9.1	0.0	0.3	chr16	84804998	84805306	(5533039)	+	AluSc	SINE/Alu	1	308	(1)	1533607
903	28.8	12.2	2.4	chr16	84805307	84805629	(5532716)	+	MLT1C	LTR/ERVL-MaLR	93	461	(6)	1533604
255	28.6	9.9	0.0	chr16	84819282	84819372	(5518973)	+	MIRb	SINE/MIR	84	184	(84)	1533635
255	18.8	0.0	0.0	chr16	84819672	84819719	(5518626)	+	MIRb	SINE/MIR	205	252	(16)	1533635
253	12.6	2.1	7.0	chr16	84930376	84931001	(5407344)	+	(GTGTGG)n	Simple_repeat	1	639	(0)	1533857
1215	17.0	7.3	2.2	chr16	84931017	84931287	(5407058)	C	MLT1D	LTR/ERVL-MaLR	(127)	378	93	1533858
1722	21.1	7.3	3.7	chr16	85022551	85022982	(5315363)	+	L1MC4	LINE/L1	7169	7620	(422)	1534037
1055	12.8	12.4	6.0	chr16	85022983	85023154	(5315191)	+	MLT1D	LTR/ERVL-MaLR	254	442	(63)	1534039
2299	10.0	0.7	0.0	chr16	85023155	85023464	(5314881)	C	AluSx	SINE/Alu	(0)	312	1	1534040
1289	21.7	5.1	4.0	chr16	85106307	85106733	(5231612)	+	MLT1D	LTR/ERVL-MaLR	2	433	(72)	1534187
2189	10.8	1.0	0.3	chr16	85468973	85469267	(4869078)	+	AluSq2	SINE/Alu	1	297	(16)	1534902
822	26.1	11.4	5.0	chr16	85469268	85469552	(4868793)	+	MLT1C	LTR/ERVL-MaLR	136	460	(7)	1534901
2207	8.5	2.9	0.0	chr16	85791303	85791609	(4546736)	C	L1PA8	LINE/L1	(1)	6171	5856	1535461
1747	17.1	11.8	1.1	chr16	85791622	85791976	(4546369)	C	MLT1D	LTR/ERVL-MaLR	(107)	398	1	1535458
1270	27.2	5.4	3.2	chr16	86387738	86388173	(3950172)	C	MLT1C	LTR/ERVL-MaLR	(16)	451	6	1536554
2014	20.0	8.1	2.2	chr16	87128930	87129383	(3208962)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	23	1537851
25	23.9	1.7	0.0	chr16	89489211	89489268	(849077)	+	(AC)n	Simple_repeat	1	59	(0)	1541346
11	16.9	2.9	2.8	chr16	89489367	89489401	(848944)	+	(CCGCCA)n	Simple_repeat	1	36	(0)	1541347
397	24.2	13.7	0.0	chr16	89954536	89954655	(383690)	+	L2a	LINE/L2	3281	3419	(7)	1542156
328	5.7	1.2	3.4	chr17	113094	113583	(83143858)	+	(ACCCTA)n	Simple_repeat	1	496	(0)	1544650
351	27.1	11.0	0.0	chr17	510520	510648	(82746793)	+	MIRb	SINE/MIR	61	205	(63)	1545286
275	34.7	7.0	7.0	chr17	1504145	1504386	(81753055)	C	L2b	LINE/L2	(38)	3337	3096	1547265
223	32.6	11.7	3.7	chr17	1504551	1504738	(81752703)	+	MIRb	SINE/MIR	18	222	(46)	1547266
2554	7.4	0.3	0.0	chr17	4254024	4254333	(79003108)	+	AluSc8	SINE/Alu	1	311	(0)	1552624
1241	23.4	7.3	6.2	chr17	4254334	4254661	(79002780)	+	MLT1D	LTR/ERVL-MaLR	194	505	(0)	1552623
1514	23.8	6.8	2.5	chr17	10065313	10065751	(73191690)	C	MLT1D	LTR/ERVL-MaLR	(33)	472	14	1563956
470	24.2	5.5	2.5	chr17	10222779	10222909	(73034532)	+	MER113A	DNA/hAT-Charlie	151	286	(28)	1564303
2087	20.4	1.6	9.0	chr17	10222910	10223228	(73034213)	C	MLT1D	LTR/ERVL-MaLR	(2)	503	200	1564304
2227	21.1	5.2	0.0	chr17	13214160	13214618	(70042823)	+	MLT1D	LTR/ERVL-MaLR	22	505	(0)	1569402
1271	22.8	7.6	3.1	chr17	17447693	17448087	(65809354)	+	MLT1C	LTR/ERVL-MaLR	6	414	(53)	1576681
235	34.1	11.9	1.4	chr17	19345173	19345389	(63912052)	C	L2	LINE/L2	(418)	3001	2759	1580431
379	22.8	5.9	7.3	chr17	19345390	19345526	(63911915)	+	MLT1D	LTR/ERVL-MaLR	5	139	(366)	1580432
665	23.6	7.7	1.4	chr17	19345553	19345771	(63911670)	+	MLT1D	LTR/ERVL-MaLR	272	505	(0)	1580432
767	21.9	7.5	1.6	chr17	21386070	21386320	(61871121)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	201	1584181
761	17.8	15.2	0.7	chr17	21386347	21386498	(61870943)	C	AluJb	SINE/Alu	(18)	294	117	1584182
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
1545	18.6	0.5	0.9	chr17	26935986	26936392	(56321049)	+	(GAATG)n	Satellite	1	409	(0)	1585984
1545	18.6	0.5	0.9	chr17	26939888	26940398	(56317043)	+	(GAATG)n	Satellite	3	514	(0)	1585998
301	22.2	3.1	0.0	chr17	26940399	26940461	(56316980)	+	AluYj4	SINE/Alu	224	288	(23)	1585999
1545	18.6	0.5	0.9	chr17	26940461	26941027	(56316414)	+	(GAATG)n	Satellite	4	569	(0)	1586000
1933	16.5	11.8	2.4	chr17	28320614	28321066	(54936375)	C	MLT1D	LTR/ERVL-MaLR	(4)	501	1	1588463
1106	26.6	7.7	5.0	chr17	30682966	30683198	(52574243)	C	MLT1D	LTR/ERVL-MaLR	(53)	452	201	1593023
301	29.6	13.9	5.3	chr17	31386691	31386879	(51870562)	C	MIRb	SINE/MIR	(35)	233	26	1594468
792	25.4	9.2	2.7	chr17	31386919	31387281	(51870160)	C	MLT1C	LTR/ERVL-MaLR	(0)	505	117	1594469
466	25.1	11.2	0.6	chr17	31699379	31699546	(51557895)	C	MIR3	SINE/MIR	(12)	196	9	1595121
1582	21.3	11.3	3.2	chr17	37678498	37678958	(45578483)	+	MLT1D	LTR/ERVL-MaLR	1	503	(2)	1606324
559	29.9	5.1	5.1	chr17	37679109	37679344	(45578097)	+	L2a	LINE/L2	3181	3416	(10)	1606325
209	32.9	9.6	4.8	chr17	39571023	39571338	(43686103)	+	L2c	LINE/L2	2918	3250	(137)	1610381
2049	18.9	8.6	5.2	chr17	39571363	39571847	(43685594)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	3	1610382
2627	17.8	4.4	1.0	chr17	41546533	41547020	(41710421)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	1613790
13	17.7	2.5	2.4	chr17	42277597	42277636	(40979805)	+	(CAGGAAG)n	Simple_repeat	1	41	(0)	1615287
945	23.8	3.3	1.8	chr17	45855154	45855419	(37402022)	+	MLT1D	LTR/ERVL-MaLR	196	493	(12)	1622911
1844	22.4	7.0	1.9	chr17	45912239	45912712	(37344729)	+	MLT1D	LTR/ERVL-MaLR	6	505	(0)	1623022
1614	23.7	8.9	2.8	chr17	47961662	47962133	(35295308)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	2	1627020
1261	20.1	15.1	4.7	chr17	47962942	47963272	(35294169)	+	MLT1C	LTR/ERVL-MaLR	6	391	(76)	1627023
1551	22.5	12.1	2.1	chr17	48694643	48695060	(34562381)	C	MLT1D	LTR/ERVL-MaLR	(2)	503	39	1628312
2553	5.3	1.9	0.0	chr17	48695121	48695423	(34562018)	C	AluY	SINE/Alu	(2)	309	1	1628313
1478	22.2	13.5	4.8	chr17	49725712	49726169	(33531272)	+	MLT1D	LTR/ERVL-MaLR	2	505	(0)	1630463
12	31.4	4.5	0.0	chr17	49763533	49763599	(33493842)	+	(CCCTCAC)n	Simple_repeat	1	70	(0)	1630519
398	30.2	4.7	3.4	chr17	50411940	50412148	(32845293)	+	L2c	LINE/L2	3000	3211	(176)	1631730
225	24.0	0.0	2.0	chr17	50412199	50412249	(32845192)	+	MLT1L	LTR/ERVL-MaLR	237	286	(324)	1631731
412	27.2	9.3	0.7	chr17	50412340	50412476	(32844965)	+	MLT1D	LTR/ERVL-MaLR	216	365	(102)	1631732
1143	16.9	0.0	1.9	chr17	50412477	50412681	(32844760)	C	AluSx	SINE/Alu	(4)	308	108	1631733
3999	5.2	0.0	0.0	chr17	50412688	50413150	(32844291)	C	LTR2	LTR/ERV1	(0)	463	1	1631734
1614	20.2	12.7	3.1	chr17	58314274	58314722	(24942719)	+	MLT1D	LTR/ERVL-MaLR	1	498	(7)	1644810
1498	22.8	11.3	3.7	chr17	59191961	59192425	(24065016)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	1646655
392	19.5	0.0	4.7	chr17	59192426	59192447	(24064994)	+	MIR	SINE/MIR	157	174	(88)	1646654
2149	12.4	4.1	5.4	chr17	59192448	59192839	(24064602)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	4	1646656
1123	21.3	7.4	5.3	chr17	60574815	60575132	(22682309)	+	MLT1D	LTR/ERVL-MaLR	1	325	(180)	1649564
3248	23.3	11.9	11.6	chr17	60575133	60575421	(22682020)	C	L1M4	LINE/L1	(5797)	1720	1416	1649565
4569	15.4	3.7	4.6	chr17	64401732	64402078	(18855363)	+	L1MB7	LINE/L1	5820	6184	(0)	1656503
1231	22.8	7.0	5.9	chr17	64402091	64402402	(18855039)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	194	1656507
1640	20.6	2.6	0.0	chr17	64402403	64402698	(18854743)	C	AluJb	SINE/Alu	(8)	304	1	1656508
712	18.8	0.7	2.1	chr17	66677829	66677969	(16579472)	C	L1MB7	LINE/L1	(19)	6165	6027	1660639
1480	22.4	11.8	1.3	chr17	66677981	66678428	(16579013)	+	MLT1D	LTR/ERVL-MaLR	1	501	(4)	1660640
689	18.4	5.3	6.6	chr17	67862637	67863035	(15394406)	C	MLT1C-int	LTR/ERVL-MaLR	(2)	503	3	1662987
1637	18.1	8.1	4.3	chr17	67863042	67863277	(15394164)	C	MLT1C	LTR/ERVL-MaLR	(6)	461	219	1662987
1718	19.6	7.3	1.8	chr17	70671586	70671984	(12585457)	+	MLT1D	LTR/ERVL-MaLR	72	494	(11)	1667649
1869	16.6	0.7	1.3	chr17	73104679	73104986	(10152455)	+	AluSz6	SINE/Alu	1	306	(6)	1671635
1866	17.0	13.8	4.4	chr17	73104987	73105248	(10152193)	+	MLT1D	LTR/ERVL-MaLR	183	498	(7)	1671634
1712	23.5	2.7	1.2	chr17	73441383	73441783	(9815658)	+	MLT1C	LTR/ERVL-MaLR	57	463	(4)	1672325
1652	20.3	13.3	4.4	chr17	73855367	73855824	(9401617)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	1673067
2148	11.2	1.6	1.6	chr17	74179033	74179337	(9078104)	+	AluSz6	SINE/Alu	1	305	(7)	1673633
1078	23.4	5.0	11.6	chr17	74179338	74179659	(9077782)	+	MLT1C	LTR/ERVL-MaLR	128	459	(8)	1673632
993	25.8	5.5	12.3	chr17	74410826	74411223	(8846218)	+	MLT1C	LTR/ERVL-MaLR	53	422	(45)	1674108
2109	11.9	0.0	1.1	chr17	74411233	74411558	(8845883)	C	AluSx1	SINE/Alu	(0)	312	6	1674109
1942	7.1	0.7	4.8	chr17	75035539	75035832	(8221609)	+	AluSx3	SINE/Alu	1	282	(29)	1675216
21	12.2	0.0	0.0	chr17	75589193	75589228	(7668213)	+	(GGC)n	Simple_repeat	1	36	(0)	1676428
1517	17.1	4.8	5.7	chr17	76377507	76377840	(6879601)	+	MLT1D	LTR/ERVL-MaLR	1	331	(174)	1677939
710	3.6	2.4	0.0	chr17	76377887	76377969	(6879472)	C	AluSx3	SINE/Alu	(11)	300	216	1677940
1451	20.9	3.1	5.7	chr17	77031976	77032376	(6225065)	+	MLT1D	LTR/ERVL-MaLR	7	396	(109)	1679283
907	23.3	10.3	6.7	chr17	77127679	77128097	(6129344)	+	MLT1C	LTR/ERVL-MaLR	7	442	(25)	1679505
1763	16.3	15.8	2.0	chr17	78787715	78788115	(4469326)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	1682458
2526	7.5	0.0	0.0	chr17	78788157	78788462	(4468979)	C	AluSc	SINE/Alu	(3)	306	1	1682459
694	24.9	3.5	11.4	chr17	79050250	79050557	(4206884)	C	MLT1C	LTR/ERVL-MaLR	(184)	283	1	1682902
645	23.7	7.0	4.9	chr17	79719594	79719859	(3537582)	+	MLT1C	LTR/ERVL-MaLR	3	274	(193)	1683807
521	25.0	6.5	6.2	chr17	80448744	80449033	(2808408)	+	MLT1C	LTR/ERVL-MaLR	53	343	(124)	1685028
321	23.6	0.0	2.2	chr17	80449032	80449122	(2808319)	+	MLT1H2	LTR/ERVL-MaLR	287	375	(15)	1685029
121	22.7	0.4	8.2	chr17	80929972	80930312	(2327129)	+	(CTCAG)n	Simple_repeat	1	313	(0)	1685673
32	10.5	0.0	6.5	chr17	80930313	80930405	(2327036)	+	(CAGCT)n	Simple_repeat	1	93	(0)	1685674
121	22.7	0.4	8.2	chr17	80930406	80930537	(2326904)	+	(CTCAG)n	Simple_repeat	4	127	(0)	1685675
335	22.3	2.1	0.0	chr17	80966759	80966852	(2290589)	C	MLT1E2	LTR/ERVL-MaLR	(154)	351	256	1685708
1940	14.8	5.5	0.0	chr17	80966980	80967269	(2290172)	C	AluSx	SINE/Alu	(5)	307	1	1685709
168	34.2	0.7	0.5	chr17	81169756	81170360	(2087081)	+	(GT)n	Simple_repeat	1	609	(0)	1685942
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
2189	10.7	1.3	1.3	chr17	82652351	82652658	(604783)	+	AluSx1	SINE/Alu	1	308	(4)	1688041
1114	27.0	11.7	3.3	chr17	82652659	82653040	(604401)	+	MLT1D	LTR/ERVL-MaLR	71	498	(7)	1688040
954	18.2	13.0	1.8	chr17	82672476	82672813	(584628)	+	MSTC	LTR/ERVL-MaLR	1	418	(10)	1688063
540	3.0	2.1	1.6	chr18	10001	10631	(80362654)	+	(CCCTAA)n	Simple_repeat	1	644	(0)	1689081
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
200	2.8	7.2	2.7	chr18	4510685	4511029	(75862256)	+	(GTG)n	Simple_repeat	1	370	(0)	1696090
2334	13.1	1.3	0.0	chr18	25971310	25971614	(54401671)	+	AluSx	SINE/Alu	1	309	(3)	1720101
1789	21.2	11.3	4.7	chr18	25971615	25972018	(54401267)	C	MLT1D	LTR/ERVL-MaLR	(59)	446	1	1720100
2128	20.9	4.1	1.5	chr18	33494533	33495007	(46878278)	C	MLT1D	LTR/ERVL-MaLR	(13)	492	5	1730811
2044	18.9	5.9	7.0	chr18	35399327	35399837	(44973448)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	1733259
205	18.6	0.3	0.0	chr18	46546273	46546655	(33826630)	+	(CATTC)n	Satellite	1	384	(0)	1748842
28122	17.0	7.8	7.8	chr18	52790112	52792754	(27580531)	C	HUERS-P3b-int	LTR/ERV1	(7)	2901	90	1758952
78	6.2	1.0	0.9	chr18	52792755	52792858	(27580427)	+	(ATTCC)n	Simple_repeat	1	105	(0)	1758954
28122	17.0	7.8	7.8	chr18	52792859	52792933	(27580352)	C	HUERS-P3b-int	LTR/ERV1	(7329)	89	25	1758952
1714	26.6	9.7	9.3	chr18	74617198	74618378	(5754907)	C	L1MC4	LINE/L1	(138)	7904	6719	1790144
817	18.5	13.0	3.4	chr18	75241666	75242062	(5131223)	C	MLT1C	LTR/ERVL-MaLR	(26)	601	3	1790788
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
631	24.4	16.6	0.6	chr19	556725	557079	(58060537)	C	MLT1C	LTR/ERVL-MaLR	(33)	434	12	1797144
628	25.2	7.4	2.7	chr19	637054	637333	(57980283)	C	MLT1D	LTR/ERVL-MaLR	(21)	484	174	1797271
846	23.9	9.3	9.5	chr19	895285	895646	(57721970)	+	MLT1C	LTR/ERVL-MaLR	38	403	(64)	1797838
1637	15.8	5.4	3.8	chr19	895647	895797	(57721819)	C	AluJo	SINE/Alu	(10)	302	144	1797839
2485	7.7	0.3	0.6	chr19	943285	943596	(57674020)	+	AluSx1	SINE/Alu	1	311	(1)	1797938
627	24.3	12.5	1.4	chr19	943597	943728	(57673888)	+	MLT1C	LTR/ERVL-MaLR	183	333	(134)	1797936
191	29.7	1.9	9.0	chr19	943859	943969	(57673647)	C	L2b	LINE/L2	(9)	3366	3264	1797939
17	8.4	7.9	0.0	chr19	1082038	1082075	(57535541)	+	(GGAGCT)n	Simple_repeat	1	41	(0)	1798197
2439	8.4	0.0	2.5	chr19	1999679	1999998	(56617618)	+	AluSx1	SINE/Alu	1	312	(0)	1799901
305	22.7	8.1	1.2	chr19	2000019	2000208	(56617408)	+	MLT1D	LTR/ERVL-MaLR	224	433	(34)	1799902
2293	11.0	0.0	0.0	chr19	2234718	2235025	(56382591)	+	AluSx	SINE/Alu	1	308	(4)	1800383
894	24.9	14.0	4.7	chr19	2235026	2235319	(56382297)	+	MLT1C	LTR/ERVL-MaLR	126	460	(7)	1800381
1157	23.6	8.0	4.1	chr19	2304360	2304710	(56312906)	+	MLT1D	LTR/ERVL-MaLR	1	373	(132)	1800509
2011	10.6	3.6	0.7	chr19	2304711	2305008	(56312608)	C	AluSx3	SINE/Alu	(0)	311	1	1800510
798	26.5	5.0	11.8	chr19	4381924	4382249	(54235367)	C	MLT1D	LTR/ERVL-MaLR	(25)	480	192	1805467
2824	1.6	0.0	0.0	chr19	4382250	4382556	(54235060)	C	AluY	SINE/Alu	(4)	307	1	1805468
541	11.5	1.1	0.0	chr19	4628708	4628794	(53988822)	C	MLT1D	LTR/ERVL-MaLR	(116)	389	302	1806056
863	13.1	2.2	2.9	chr19	4628808	4628944	(53988672)	C	AluJr4	SINE/Alu	(176)	136	1	1806057
1072	20.3	0.7	12.9	chr19	4628948	4629089	(53988527)	C	MLT1D	LTR/ERVL-MaLR	(198)	307	190	1806056
1869	15.7	0.3	2.3	chr19	5534686	5534985	(53082631)	C	AluJr	SINE/Alu	(18)	294	1	1808284
2058	18.7	1.7	5.2	chr19	6445408	6445719	(52171897)	+	MLT1D	LTR/ERVL-MaLR	189	478	(27)	1810259
12	5.9	10.3	4.7	chr19	6516896	6516934	(52100682)	+	(TCCCGCTC)n	Simple_repeat	1	43	(0)	1810457
488	28.3	9.4	3.3	chr19	6727335	6727516	(51890100)	C	MIR	SINE/MIR	(51)	211	18	1811010
1959	20.6	10.5	5.8	chr19	6727517	6727947	(51889669)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	34	1811011
2248	9.8	1.4	0.3	chr19	6727948	6728242	(51889374)	C	AluSx1	SINE/Alu	(8)	304	7	1811012
84	28.7	0.8	1.2	chr19	6877843	6877948	(51739668)	+	GA-rich	Low_complexity	150	254	(0)	1811441
940	23.5	2.7	7.0	chr19	6877955	6878238	(51739378)	+	MLT1D	LTR/ERVL-MaLR	222	474	(31)	1811437
2123	20.4	7.9	3.1	chr19	7481502	7481873	(51135743)	+	MLT1D	LTR/ERVL-MaLR	115	505	(0)	1813028
1480	21.8	9.5	5.0	chr19	8628118	8628382	(49989234)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	178	1815758
2140	13.4	0.0	1.3	chr19	8628383	8628689	(49988927)	C	AluSq2	SINE/Alu	(7)	306	4	1815759
19	17.9	0.0	2.2	chr19	12775556	12775601	(45842015)	+	(GCCCC)n	Simple_repeat	1	46	(0)	1825188
877	15.6	0.7	0.7	chr19	13854420	13854560	(44763056)	C	AluSx	SINE/Alu	(171)	141	1	1827967
1678	18.3	0.3	2.7	chr19	13854561	13854721	(44762895)	C	AluJo	SINE/Alu	(18)	294	134	1827968
2041	4.7	8.2	0.0	chr19	13854722	13855007	(44762609)	C	AluY	SINE/Alu	(0)	311	1	1827969
13	18.3	5.4	0.0	chr19	15432769	15432805	(43184811)	+	(GCC)n	Simple_repeat	1	39	(0)	1831784
1096	9.6	0.0	0.0	chr19	17169420	17169554	(41448062)	+	AluSx1	SINE/Alu	84	218	(94)	1835663
598	26.5	7.9	3.2	chr19	17169561	17169778	(41447838)	C	MLT1C	LTR/ERVL-MaLR	(52)	415	187	1835664
31	0.0	0.0	0.0	chr19	17169803	17169831	(41447785)	+	(T)n	Simple_repeat	1	29	(0)	1835665
1224	8.8	0.0	13.4	chr19	17169844	17170060	(41447556)	C	AluSx1	SINE/Alu	(39)	273	86	1835666
1976	17.0	0.3	0.3	chr19	17922516	17922826	(40694790)	+	AluJb	SINE/Alu	1	311	(1)	1837627
1083	19.0	4.8	7.8	chr19	17922827	17923022	(40694594)	C	MLT1C	LTR/ERVL-MaLR	(55)	412	213	1837626
2049	12.2	3.5	0.3	chr19	17923059	17923361	(40694255)	C	AluSq2	SINE/Alu	(0)	313	1	1837628
782	25.9	4.5	3.9	chr19	18722324	18722608	(39895008)	+	MLT1C	LTR/ERVL-MaLR	6	292	(175)	1839447
1669	20.1	7.3	0.8	chr19	18722609	18722946	(39894670)	C	L1MB5	LINE/L1	(1)	6173	5823	1839448
42	0.0	2.4	0.0	chr19	19102744	19102785	(39514831)	+	(AAAT)n	Simple_repeat	1	43	(0)	1840263
1855	23.3	4.5	3.7	chr19	19102800	19103081	(39514535)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	184	1840264
2134	13.7	0.3	0.6	chr19	19103082	19103394	(39514222)	C	AluSz6	SINE/Alu	(0)	312	1	1840265
216	25.0	0.6	0.4	chr19	30162672	30163096	(28454520)	+	(ATCC)n	Simple_repeat	1	426	(0)	1851488
1613	17.1	13.0	3.5	chr19	36045569	36045969	(22571647)	+	MLT1D	LTR/ERVL-MaLR	59	503	(2)	1861750
261	28.2	6.9	5.1	chr19	36045971	36046034	(22571582)	+	L1MC5a	LINE/L1	671	737	(2040)	1861753
1580	21.4	4.2	4.6	chr19	39217246	39217513	(19400103)	+	MLT1D	LTR/ERVL-MaLR	48	315	(190)	1868562
2290	12.8	0.0	0.3	chr19	39217514	39217825	(19399791)	+	AluSz	SINE/Alu	1	311	(1)	1868563
1910	20.5	8.1	1.8	chr19	42193259	42193700	(16423916)	+	MLT1D	LTR/ERVL-MaLR	27	498	(7)	1874776
2296	11.5	0.0	0.0	chr19	45038571	45038882	(13578734)	+	AluSx	SINE/Alu	1	312	(0)	1880308
18	8.5	0.0	0.0	chr19	45039357	45039381	(13578235)	+	(A)n	Simple_repeat	1	25	(0)	1880309
1897	20.6	2.1	8.8	chr19	48281211	48281506	(10336110)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	177	1888362
1997	14.2	0.6	2.5	chr19	48281507	48281824	(10335792)	C	AluJr	SINE/Alu	(0)	312	1	1888363
1675	18.0	0.0	7.7	chr19	48651014	48651199	(9966417)	+	AluJb	SINE/Alu	126	298	(14)	1889288
1009	25.6	7.3	1.6	chr19	48651210	48651531	(9966085)	+	MLT1C	LTR/ERVL-MaLR	110	451	(16)	1889290
1437	18.3	9.3	5.7	chr19	49078330	49078630	(9538986)	+	MLT1D	LTR/ERVL-MaLR	190	505	(0)	1890320
1707	18.7	14.2	1.8	chr19	49915163	49915598	(8702018)	+	MLT1D	LTR/ERVL-MaLR	4	502	(3)	1892194
4267	15.9	0.8	4.1	chr19	50135484	50135964	(8481652)	C	L1P4	LINE/L1	(2469)	3677	3219	1892740
1885	14.3	2.4	0.9	chr19	50135965	50136288	(8481328)	+	L1PB1	LINE/L1	5822	6150	(1)	1892741
4267	15.9	0.8	4.1	chr19	50136289	50136658	(8480958)	C	L1P4	LINE/L1	(2928)	3218	2854	1892740
1120	9.2	0.0	13.3	chr19	50136668	50136863	(8480753)	+	AluSx	SINE/Alu	137	306	(6)	1892742
323	25.0	10.1	2.4	chr19	50136865	50137073	(8480543)	C	L1MC4	LINE/L1	(5098)	1117	891	1892743
2205	20.6	3.6	4.5	chr19	55505416	55505736	(3111880)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	187	1903864
633	24.9	8.1	2.3	chr2	3487342	3487572	(238705957)	C	MLT1D	LTR/ERVL-MaLR	(258)	247	1	1914524
289	20.3	7.2	2.2	chr2	4973258	4974251	(237219278)	+	(GT)n	Simple_repeat	1	1044	(0)	1916452
185	30.9	0.0	0.0	chr2	4974274	4974328	(237219201)	C	L2a	LINE/L2	(260)	3166	3112	1916453
565	23.3	0.2	0.2	chr2	5022390	5023594	(237169935)	+	(CTACTA)n	Simple_repeat	1	1208	(0)	1916517
1957	16.0	0.0	2.2	chr2	20230351	20230663	(221962866)	+	AluJb	SINE/Alu	1	306	(6)	1939977
1703	22.8	2.6	9.2	chr2	20230664	20231135	(221962394)	C	MLT1D	LTR/ERVL-MaLR	(68)	437	1	1939976
455	25.4	9.1	15.1	chr2	26751219	26751317	(215442212)	C	L1MC5a	LINE/L1	(155)	2622	2509	1950529
2237	19.0	10.5	1.3	chr2	26751318	26751775	(215441754)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	1950533
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
1368	24.1	10.5	6.8	chr2	53557291	53557775	(188635754)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	1992775
849	26.1	8.7	2.8	chr2	69312343	69312787	(172880742)	+	L1M5	LINE/L1	3956	4448	(1698)	2016836
1538	21.8	12.7	1.6	chr2	69312795	69313236	(172880293)	C	MLT1D	LTR/ERVL-MaLR	(7)	498	1	2016837
16	18.9	2.9	7.0	chr2	69387229	69387297	(172806232)	+	(CCGCCGC)n	Simple_repeat	1	71	(0)	2016984
12	26.2	0.0	2.3	chr2	69387605	69387647	(172805882)	+	(GCAGGAA)n	Simple_repeat	1	43	(0)	2016985
410	31.7	1.6	0.8	chr2	70900986	70901106	(171292423)	C	L2b	LINE/L2	(2)	3373	3252	2019792
1590	19.1	9.2	5.4	chr2	86567311	86567758	(155625771)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	2042861
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
1352	25.1	5.5	3.6	chr2	109418304	109418749	(132774780)	C	MLT1C	LTR/ERVL-MaLR	(6)	461	7	2070680
18	9.7	0.0	5.4	chr2	113890231	113890267	(128303262)	+	(AGC)n	Simple_repeat	1	37	(0)	2077578
2076	19.4	6.9	2.8	chr2	121023976	121024432	(121169097)	+	MLT1D	LTR/ERVL-MaLR	28	504	(1)	2087909
15	28.0	0.0	0.0	chr2	121024439	121024449	(121169080)	+	(AT)n	Simple_repeat	1	11	(0)	2087910
34	0.0	0.0	0.0	chr2	121024450	121024478	(121169051)	+	(TG)n	Simple_repeat	1	29	(0)	2087911
3124	28.9	9.7	2.1	chr2	127178885	127179032	(115014497)	+	L1MEd	LINE/L1	5	156	(6930)	2097008
1749	20.4	10.5	4.5	chr2	127179033	127179504	(115014025)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	2	2097009
801	24.1	0.9	0.4	chr2	132270234	132271773	(109921756)	+	GA-rich	Low_complexity	396	1942	(0)	2104316
1413	23.6	12.8	2.3	chr2	149715260	149715692	(92477837)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	21	2128459
676	21.2	4.3	12.9	chr2	161278581	161278835	(80914694)	C	L1MB8	LINE/L1	(108)	6070	5839	2144203
67	0.0	0.0	0.0	chr2	161278891	161278950	(80914579)	+	(TCCT)n	Simple_repeat	1	60	(0)	2144204
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
3451	13.4	3.5	1.0	chr2	171432770	171433357	(70760172)	C	MER6A	DNA/TcMar-Tigger	(2)	603	1	2158426
1643	21.9	6.3	4.6	chr2	171529849	171530302	(70663227)	+	MLT1C	LTR/ERVL-MaLR	6	467	(0)	2158587
841	20.1	10.7	0.5	chr2	171530311	171530520	(70663009)	+	LTR87	LTR/ERVL?	368	601	(23)	2158585
1261	25.6	12.1	2.4	chr2	172169529	172169982	(70023547)	+	MLT1D	LTR/ERVL-MaLR	1	559	(1)	2159739
16	0.0	0.0	0.0	chr2	172428546	172428562	(69764967)	+	(A)n	Simple_repeat	1	17	(0)	2160152
579	28.2	9.9	0.6	chr2	177674105	177674250	(64519279)	+	MIRb	SINE/MIR	12	172	(96)	2167932
1486	20.4	12.5	1.6	chr2	177674251	177674697	(64518832)	C	MLT1D	LTR/ERVL-MaLR	(2)	503	1	2167933
1618	24.7	3.3	4.9	chr2	200008206	200008698	(42184831)	+	MLT1D	LTR/ERVL-MaLR	21	505	(0)	2197685
2680	23.6	11.4	0.8	chr2	200008700	200009326	(42184203)	C	L1ME2	LINE/L1	(1581)	4565	3857	2197682
2087	19.2	2.8	2.8	chr2	201935647	201936079	(40257450)	+	MLT1D	LTR/ERVL-MaLR	67	499	(6)	2200877
552	20.3	1.1	18.4	chr2	203238096	203238241	(38955288)	C	MER5A	DNA/hAT-Charlie	(2)	187	78	2203557
1906	12.8	4.5	0.3	chr2	203238242	203238420	(38955109)	C	AluJb	SINE/Alu	(0)	312	134	2203558
30	0.0	0.0	0.0	chr2	203238421	203238448	(38955081)	+	(T)n	Simple_repeat	1	28	(0)	2203559
1906	12.8	4.5	0.3	chr2	203238449	203238566	(38954963)	C	AluJb	SINE/Alu	(193)	119	2	2203558
1344	27.6	7.1	3.0	chr2	235489678	235489886	(6703643)	C	L2a	LINE/L2	(5)	3421	3215	2253729
2356	16.6	6.4	7.9	chr2	235489887	235490395	(6703134)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	5	2253730
113	17.2	2.3	3.4	chr2	237946425	237946686	(4246843)	+	GA-rich	Low_complexity	1	268	(0)	2257111
1273	14.6	9.2	3.0	chr2	237946715	237946957	(4246572)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	242	2257112
30	0.0	0.0	0.0	chr2	237946958	237946985	(4246544)	+	(CCCT)n	Simple_repeat	1	28	(0)	2257113
1273	14.6	9.2	3.0	chr2	237946986	237947002	(4246527)	C	MLT1D	LTR/ERVL-MaLR	(264)	241	224	2257112
1966	23.1	0.2	0.1	chr20	60221	63215	(64380952)	+	(ATTCC)n	Simple_repeat	2	3000	(0)	2262201
1966	23.1	0.2	0.1	chr20	63841	67292	(64376875)	+	(ATTCC)n	Simple_repeat	2	3456	(0)	2262202
2173	19.8	8.4	1.1	chr20	650861	651325	(63792842)	+	MLT1D	LTR/ERVL-MaLR	4	505	(0)	2263430
1186	21.8	10.0	9.8	chr20	3655414	3655786	(60788381)	C	MLT1D	LTR/ERVL-MaLR	(2)	503	105	2269259
20	22.1	0.0	0.0	chr20	4687236	4687283	(59756884)	+	G-rich	Low_complexity	1	48	(0)	2271155
315	9.1	0.5	0.2	chr20	20337231	20337677	(44106490)	+	(GGAT)n	Simple_repeat	1	449	(0)	2295511
21	30.9	1.4	0.0	chr20	25867722	25867792	(38576375)	+	GA-rich	Low_complexity	1	72	(0)	2302877
2308	29.1	5.8	6.1	chr20	25867794	25869361	(38574806)	C	SST1	Satellite/centr	(1)	1562	1	2302878
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
2258	17.1	5.3	6.1	chr20	31874710	31875088	(32569079)	+	MLT1D	LTR/ERVL-MaLR	111	505	(0)	2307071
256	33.9	0.0	6.9	chr20	31875089	31875162	(32569005)	+	L2c	LINE/L2	2859	2926	(493)	2307070
459	29.9	2.0	1.4	chr20	31875169	31875314	(32568853)	+	MIRb	SINE/MIR	93	239	(29)	2307073
1633	23.5	8.6	4.0	chr20	36061755	36062233	(28381934)	C	MLT1D	LTR/ERVL-MaLR	(2)	503	1	2316754
3733	7.5	0.9	10.3	chr20	36083985	36084137	(28360030)	+	MER41A	LTR/ERV1	464	554	(0)	2316809
2161	17.8	9.2	3.3	chr20	36084138	36084170	(28359997)	+	MLT2B1	LTR/ERVL	491	519	(1)	2316807
271	35.0	3.2	1.6	chr20	36084190	36084372	(28359795)	C	L1ME3G	LINE/L1	(1052)	5094	4909	2316806
1989	16.4	7.8	3.4	chr20	36084387	36084827	(28359340)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	6	2316811
101	29.2	0.7	0.3	chr20	39103379	39103672	(25340495)	+	(GATGAT)n	Simple_repeat	1	296	(0)	2323515
344	29.9	18.8	0.6	chr20	39103680	39103747	(25340420)	C	MIRb	SINE/MIR	(16)	252	164	2323516
1289	23.9	13.8	4.6	chr20	39103748	39104200	(25339967)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	5	2323517
1683	22.5	7.5	7.7	chr20	44033383	44033888	(20410279)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	2332509
1256	25.5	8.4	4.8	chr20	44640683	44641066	(19803101)	+	MLT1D	LTR/ERVL-MaLR	88	499	(6)	2333962
204	35.3	5.7	5.4	chr20	44641073	44641156	(19803011)	C	L2c	LINE/L2	(1341)	2078	1999	2333960
2166	15.0	6.1	4.4	chr20	48764812	48765071	(15679096)	+	MLT1D	LTR/ERVL-MaLR	183	460	(45)	2342815
1477	22.7	7.7	7.7	chr20	49582417	49582913	(14861254)	C	MLT1D	LTR/ERVL-MaLR	(4)	501	5	2344796
333	30.8	7.6	1.9	chr20	49842451	49842662	(14601505)	C	MER113	DNA/hAT-Charlie	(253)	268	44	2345470
1214	25.2	7.6	4.4	chr20	49842733	49843164	(14601003)	C	MLT1C	LTR/ERVL-MaLR	(14)	453	7	2345474
1914	21.2	8.5	4.0	chr20	50419267	50419737	(14024430)	+	MLT1D	LTR/ERVL-MaLR	3	496	(9)	2346872
295	28.4	0.0	2.1	chr20	50419748	50419844	(14024323)	C	L2b	LINE/L2	(630)	2789	2695	2346868
3939	9.2	10.9	0.5	chr20	52213049	52213639	(12230528)	C	MER4A	LTR/ERV1	(0)	664	5	2351024
1986	16.5	8.9	2.9	chr20	52213690	52214101	(12230066)	C	MLT1D	LTR/ERVL-MaLR	(66)	439	1	2351023
283	24.0	4.5	10.4	chr20	56358503	56358646	(8085521)	C	ORSL-2a	DNA/hAT-Tip100	(180)	162	28	2358871
12	13.2	5.7	2.7	chr20	56358737	56358771	(8085396)	+	G-rich	Low_complexity	1	37	(0)	2358874
18	9.8	4.1	5.9	chr20	56359085	56359133	(8085034)	+	(GCGCCCT)n	Simple_repeat	1	51	(0)	2358875
12	14.7	3.3	0.0	chr20	56359112	56359141	(8085026)	+	(CCCTGG)n	Simple_repeat	1	31	(0)	2358876
1509	22.0	7.1	3.8	chr20	57023436	57023884	(7420283)	+	MLT1C	LTR/ERVL-MaLR	1	465	(2)	2360393
1228	23.0	13.2	2.7	chr20	62069118	62069523	(2374644)	C	MLT1C	LTR/ERVL-MaLR	(7)	460	6	2368058
698	28.1	13.4	1.1	chr20	63486270	63486622	(957545)	+	MLT1D	LTR/ERVL-MaLR	23	425	(80)	2369612
1142	23.0	0.4	0.2	chr21	5328933	5329957	(41380026)	+	(TGGAA)n	Simple_repeat	2	1031	(0)	2371010
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
2828	18.2	1.6	1.8	chr21	7942700	7957766	(38752217)	+	(CATTC)n	Satellite	1	15309	(0)	2373121
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
334	30.3	5.3	0.0	chr21	9246374	9246462	(37463521)	+	AluYa8	SINE/Alu	185	278	(32)	2374337
436	12.7	0.0	0.0	chr21	9246781	9246835	(37463148)	+	AluYj4	SINE/Alu	225	279	(32)	2374338
404	15.6	1.5	0.0	chr21	9247151	9247214	(37462769)	+	AluYj4	SINE/Alu	224	288	(23)	2374339
74	12.3	0.0	0.0	chr21	9247783	9247915	(37462068)	+	(TGGAA)n	Simple_repeat	1	133	(0)	2374340
378	16.1	3.0	0.2	chr21	9247917	9247990	(37461993)	+	AluJb	SINE/Alu	216	290	(12)	2374341
381	17.5	1.6	0.0	chr21	9248617	9248679	(37461304)	+	AluYj4	SINE/Alu	224	287	(24)	2374342
12	28.2	1.9	1.9	chr21	9330622	9330674	(37379309)	+	(GTTTCTG)n	Simple_repeat	1	54	(0)	2374432
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
1676	16.4	2.0	3.7	chr21	10415954	10416252	(36293731)	+	AluJb	SINE/Alu	1	294	(18)	2375512
2287	17.4	5.5	5.7	chr21	28895939	28896427	(17813556)	+	MLT1D	LTR/ERVL-MaLR	18	505	(0)	2397407
1540	21.0	12.1	4.9	chr21	32136958	32137423	(14572560)	+	MLT1D	LTR/ERVL-MaLR	2	505	(0)	2402729
330	30.6	11.4	4.5	chr21	32137518	32137849	(14572134)	C	L2a	LINE/L2	(2)	3424	3020	2402730
2166	12.9	0.0	0.0	chr21	33258023	33258317	(13451666)	+	AluSx	SINE/Alu	1	295	(17)	2404604
1759	19.1	18.0	1.2	chr21	33258318	33258622	(13451361)	+	MLT1D	LTR/ERVL-MaLR	119	504	(1)	2404603
1382	25.6	5.2	4.2	chr21	33980791	33981247	(12728736)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	6	2405931
1953	23.9	2.4	2.4	chr21	34694991	34695495	(12014488)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	2407023
1850	19.7	7.3	4.7	chr21	36564618	36565108	(10144875)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	2410108
2024	20.4	3.6	5.9	chr21	38778807	38779169	(7930814)	+	MLT1D	LTR/ERVL-MaLR	132	500	(5)	2413493
1365	21.4	9.1	3.5	chr21	39447856	39448290	(7261693)	C	MLT1C	LTR/ERVL-MaLR	(5)	462	1	2414612
279	31.5	13.6	6.1	chr21	42094548	42094743	(4615240)	+	L3	LINE/CR1	3605	3817	(282)	2418433
1690	23.8	3.4	9.5	chr21	42094841	42095089	(4614894)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	272	2418434
2137	15.7	0.0	0.0	chr21	42095090	42095394	(4614589)	C	AluJo	SINE/Alu	(7)	305	1	2418435
1661	18.6	11.6	0.9	chr21	43763056	43763499	(2946484)	C	MLT1D	LTR/ERVL-MaLR	(6)	499	2	2420757
831	28.8	9.9	1.1	chr21	45382644	45383093	(1326890)	+	MLT1D	LTR/ERVL-MaLR	3	496	(9)	2422805
12	18.3	5.4	0.0	chr21	45383130	45383166	(1326817)	+	(GGCTG)n	Simple_repeat	1	39	(0)	2422806
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
530	23.4	6.1	1.9	chr22	11572555	11572711	(39245757)	+	MIRb	SINE/MIR	33	196	(72)	2425189
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
4341	4.4	0.2	0.0	chr22	18890645	18891207	(31927261)	C	HSATI	Satellite	(10)	567	4	2431162
36	2.7	13.3	0.0	chr22	18891210	18891284	(31927184)	+	(AT)n	Simple_repeat	1	85	(0)	2431163
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
1901	19.7	7.7	0.9	chr22	19009550	19009999	(31808469)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	23	2431303
276	20.0	5.3	13.5	chr22	21953082	21953185	(28865283)	C	MIR	SINE/MIR	(129)	133	39	2436268
1315	23.3	6.4	1.9	chr22	21953262	21953607	(28864861)	C	MLT1D	LTR/ERVL-MaLR	(65)	440	82	2436269
710	27.0	10.9	4.9	chr22	23525010	23525438	(27293030)	+	MLT1C	LTR/ERVL-MaLR	1	458	(9)	2438441
1747	21.3	6.4	2.6	chr22	24387707	24388089	(26430379)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	104	2439968
2224	17.5	5.3	1.6	chr22	26818425	26818876	(23999592)	+	MLT1D	LTR/ERVL-MaLR	29	498	(7)	2445245
312	14.8	0.0	1.6	chr22	26818877	26818938	(23999530)	C	MLT1H	LTR/ERVL-MaLR	(394)	155	95	2445244
1118	21.3	11.1	6.0	chr22	28864157	28864438	(21954030)	+	MLT1C	LTR/ERVL-MaLR	102	397	(70)	2449433
846	13.7	0.0	0.0	chr22	28864439	28864555	(21953913)	C	AluJo	SINE/Alu	(195)	117	1	2449435
1250	21.5	3.1	5.1	chr22	29120559	29120891	(21697577)	+	MLT1D	LTR/ERVL-MaLR	180	505	(0)	2449924
13	26.0	1.7	4.9	chr22	32474941	32475000	(18343468)	+	(GCC)n	Simple_repeat	1	61	(0)	2457054
736	24.9	0.0	3.0	chr22	35623097	35623262	(15195206)	C	MIR	SINE/MIR	(79)	183	23	2463454
268	32.7	4.1	6.9	chr22	35623652	35623772	(15194696)	+	MIR	SINE/MIR	84	201	(61)	2463455
1448	21.6	7.0	3.6	chr22	37577679	37578066	(13240402)	+	MLT1C	LTR/ERVL-MaLR	62	467	(0)	2467564
12	8.1	3.6	3.5	chr22	37658752	37658779	(13159689)	+	(CGGC)n	Simple_repeat	1	29	(0)	2467752
12	30.3	0.0	2.0	chr22	38353110	38353146	(12465322)	+	(TTTA)n	Simple_repeat	1	37	(0)	2469342
1587	22.2	8.4	5.2	chr22	40622496	40622854	(10195614)	+	MLT1D	LTR/ERVL-MaLR	140	500	(5)	2473931
733	22.3	8.9	2.6	chr22	40622864	40623052	(10195416)	C	L2a	LINE/L2	(720)	2699	2498	2473926
3766	8.5	7.8	3.6	chr22	40728749	40729324	(10089144)	C	LTR14B	LTR/ERVK	(0)	608	7	2474218
347	9.8	0.0	2.3	chr22	40729334	40729397	(10089071)	C	FLAM_C	SINE/Alu	(240)	61	1	2474219
869	22.1	11.1	3.1	chr22	40729406	40729695	(10088773)	C	MLT1C	LTR/ERVL-MaLR	(45)	422	107	2474220
2580	7.4	0.0	0.3	chr22	42446675	42446986	(8371482)	+	AluY	SINE/Alu	1	311	(0)	2478070
1318	22.0	5.8	10.8	chr22	42446987	42447266	(8371202)	+	MLT1C	LTR/ERVL-MaLR	192	467	(0)	2478069
1965	11.0	7.5	0.0	chr22	42447308	42447579	(8370889)	+	AluSz6	SINE/Alu	1	294	(18)	2478071
1757	20.2	5.4	3.5	chr22	44135607	44136058	(6682410)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	7	2481420
2371	8.7	4.2	0.0	chr22	44662972	44663270	(6155198)	+	AluSz	SINE/Alu	1	312	(0)	2482373
1752	19.1	8.5	13.2	chr22	44663271	44663730	(6154738)	C	MLT1D	LTR/ERVL-MaLR	(62)	443	1	2482372
1267	20.3	3.5	4.6	chr22	44709316	44709571	(6108897)	+	MLT1D	LTR/ERVL-MaLR	159	414	(91)	2482487
2331	10.9	0.0	0.0	chr22	44709572	44709875	(6108593)	+	AluSg	SINE/Alu	1	304	(6)	2482488
883	24.4	4.9	11.8	chr22	45251918	45252217	(5566251)	C	MLT1C	LTR/ERVL-MaLR	(1)	466	166	2483536
1820	15.5	0.7	5.9	chr22	48951385	48951706	(1866762)	+	AluJo	SINE/Alu	1	305	(7)	2488812
562	25.6	9.8	2.5	chr22	48951707	48951857	(1866611)	+	MLT1D	LTR/ERVL-MaLR	192	347	(158)	2488811
1025	27.3	4.2	1.0	chr22	49836222	49836521	(981947)	+	MLT1C	LTR/ERVL-MaLR	158	467	(0)	2489800
405	13.0	7.8	3.1	chr22	49972792	49973865	(844603)	+	(GT)n	Simple_repeat	1	1123	(0)	2490010
266	28.7	6.9	0.0	chr22	50508655	50508748	(309720)	+	Charlie9	DNA/hAT-Charlie	14	114	(2643)	2490779
1175	34.7	15.2	1.2	chr22	50508925	50509770	(308698)	+	L2a	LINE/L2	1906	2891	(528)	2490780
704	5.2	1.1	2.0	chr3	10001	10916	(198284643)	+	(CTAACC)n	Simple_repeat	1	926	(0)	2492347
46	0.0	0.0	0.0	chr3	10917	10983	(198284576)	+	(CGACCC)n	Simple_repeat	1	67	(0)	2492348
1828	18.9	14.5	0.2	chr3	4537445	4537869	(193757690)	+	MLT1D	LTR/ERVL-MaLR	1	496	(9)	2499186
1747	23.9	5.7	3.2	chr3	23915024	23915498	(174380061)	+	MLT1D	LTR/ERVL-MaLR	18	505	(0)	2531000
193	18.3	0.3	0.0	chr3	38084271	38084619	(160210940)	+	(TAG)n	Simple_repeat	1	350	(0)	2552504
3365	22.0	17.0	2.0	chr3	42002540	42002639	(156292920)	C	L2a	LINE/L2	(1634)	1785	1685	2558361
1584	23.6	8.6	4.8	chr3	42002640	42003016	(156292543)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	107	2558365
966	20.5	11.5	4.7	chr3	45682838	45683250	(152612309)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	27	2564279
1603	15.8	4.5	1.9	chr3	64430501	64430822	(133864737)	+	MLT1C	LTR/ERVL-MaLR	58	388	(79)	2595723
2459	7.4	0.6	1.0	chr3	66069429	66069739	(132225820)	C	AluSz	SINE/Alu	(0)	312	3	2598598
2121	20.3	3.6	7.2	chr3	66069740	66070064	(132225495)	C	MLT1D	LTR/ERVL-MaLR	(179)	326	1	2598597
1975	25.0	7.7	4.2	chr3	66527828	66528429	(131767130)	+	MLT1E2	LTR/ERVL-MaLR	3	627	(0)	2599341
2555	15.6	6.3	4.0	chr3	72076555	72076997	(126218562)	C	MLT1D	LTR/ERVL-MaLR	(36)	469	13	2608411
1424	27.8	3.8	2.4	chr3	86260338	86260835	(112034724)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	2628052
1277	20.5	15.2	3.2	chr3	100361944	100362376	(97933183)	C	MLT1D	LTR/ERVL-MaLR	(9)	496	3	2641605
1666	23.2	7.2	3.3	chr3	102596241	102596721	(95698838)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	5	2644744
1122	22.7	12.8	7.4	chr3	120458679	120459111	(77836448)	+	MLT1D	LTR/ERVL-MaLR	46	505	(0)	2669185
2194	17.0	8.1	6.4	chr3	120472274	120472756	(77822803)	+	MLT1D	LTR/ERVL-MaLR	1	492	(13)	2669213
1322	16.1	11.9	0.3	chr3	141833049	141833351	(56462208)	+	MLT1D	LTR/ERVL-MaLR	4	341	(164)	2702952
658	17.1	6.5	0.8	chr3	141833352	141833481	(56462078)	+	MER65D	LTR/ERV1	1	138	(335)	2702953
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
1124	23.1	9.4	4.5	chr3	152137909	152138311	(46157248)	+	MLT1D	LTR/ERVL-MaLR	81	505	(0)	2717777
3283	10.1	3.2	0.0	chr3	176991030	176991485	(21304074)	C	MER1A	DNA/hAT-Charlie	(0)	529	59	2752412
1189	20.4	9.0	8.2	chr3	176991506	176991793	(21303766)	C	MLT1D	LTR/ERVL-MaLR	(150)	355	64	2752400
205	0.5	1.0	1.0	chr4	10001	10197	(190204358)	+	(ACCCTA)n	Simple_repeat	1	199	(0)	2788519
4151	15.9	5.9	18.2	chr4	10199	12822	(190201733)	C	TAR1	Satellite/telo	(238)	2302	1	2788520
1213	27.3	7.5	1.8	chr4	2808043	2808482	(187406073)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	2792261
1200	21.8	6.0	6.4	chr4	3093481	3093868	(187120687)	+	MLT1D	LTR/ERVL-MaLR	1	386	(119)	2792763
6811	8.6	1.9	1.2	chr4	3093917	3095514	(187119041)	C	SVA_B	Retroposon/SVA	(0)	1383	58	2792764
520	26.1	10.0	1.0	chr4	7150763	7150963	(183063592)	C	MLT1C	LTR/ERVL-MaLR	(7)	460	240	2799696
796	9.6	5.0	0.0	chr4	7151012	7151126	(183063429)	+	L1PA11	LINE/L1	6054	6174	(0)	2799697
1097	22.0	4.5	2.9	chr4	13487697	13488139	(176726416)	+	MLT1D	LTR/ERVL-MaLR	5	505	(0)	2809376
676	22.4	7.6	8.3	chr4	13501292	13501680	(176712875)	C	MLT1B	LTR/ERVL-MaLR	(13)	377	6	2809399
1953	20.3	7.2	3.1	chr4	42363332	42363705	(147850850)	C	MLT1D	LTR/ERVL-MaLR	(2)	503	111	2855535
1966	17.4	3.5	2.2	chr4	42363706	42364074	(147850481)	+	MLT1A	LTR/ERVL-MaLR	1	374	(0)	2855536
863	17.6	1.2	0.2	chr4	49090455	49091234	(141123321)	+	ALR/Alpha	Satellite/centr	1	788	(0)	2864886
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
14	13.7	0.0	5.6	chr4	49289254	49289289	(140925266)	+	(TTTTGC)n	Simple_repeat	1	36	(0)	2865068
1804	12.9	6.2	0.0	chr4	49289292	49289578	(140924977)	C	L1PA10	LINE/L1	(0)	6168	5863	2865069
290	27.5	0.0	0.0	chr4	49313048	49313116	(140901439)	C	MER47C	DNA/TcMar-Tigger	(28)	69	1	2865111
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
765	23.2	4.1	11.8	chr4	49510094	49510415	(140704140)	C	L1MB8	LINE/L1	(43)	6135	5840	2865174
69	6.2	0.0	0.0	chr4	49510486	49510569	(140703986)	+	(TCCT)n	Simple_repeat	1	84	(0)	2865175
304	22.8	0.0	0.0	chr4	49510858	49510914	(140703641)	C	MER47C	DNA/TcMar-Tigger	(28)	69	13	2865176
534	26.1	7.2	4.7	chr4	55345726	55346023	(134868532)	C	L1ME4c	LINE/L1	(70)	760	455	2870722
1780	17.9	11.5	14.5	chr4	56191132	56191654	(134022901)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	2872209
895	25.2	20.8	1.7	chr4	76908770	76909176	(113305379)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	2900058
2074	17.9	4.4	4.2	chr4	84596238	84596716	(105617839)	C	MLT1D	LTR/ERVL-MaLR	(5)	500	21	2911333
28	6.0	0.0	0.0	chr4	87414124	87414158	(102800397)	+	(AAT)n	Simple_repeat	1	35	(0)	2915466
1886	21.1	9.9	6.0	chr4	87414159	87414465	(102800090)	+	MLT1D	LTR/ERVL-MaLR	190	504	(1)	2915464
507	33.6	1.4	6.6	chr4	87414466	87414657	(102799898)	+	MIRb	SINE/MIR	70	252	(16)	2915463
1265	23.2	10.4	2.8	chr4	93582849	93583273	(96631282)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	7	2923842
2138	16.5	11.1	2.2	chr4	109446099	109446557	(80767998)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	2944975
328	28.0	2.5	10.8	chr4	109446558	109446589	(80767966)	+	Kanga1b	DNA/TcMar-Tc2	140	173	(606)	2944974
495	21.6	11.2	21.2	chr4	110659071	110659475	(79555080)	+	MLT1D	LTR/ERVL-MaLR	147	505	(0)	2946906
126	6.4	1.0	3.1	chr4	124470395	124470587	(65743968)	+	(CTTC)n	Simple_repeat	1	195	(0)	2965315
21	28.7	4.8	3.9	chr4	124470588	124470612	(65743943)	+	(CTCT)n	Simple_repeat	1	25	(0)	2965316
56	2.6	4.9	2.3	chr4	124470613	124470694	(65743861)	+	(TCTT)n	Simple_repeat	1	86	(0)	2965317
870	29.3	9.1	3.9	chr4	167132565	167133001	(23081554)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	6	3023205
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
2125	0.2	0.0	0.3	chr5	10001	11835	(181526424)	+	(TAACCC)n	Simple_repeat	1	1835	(0)	3054965
2353	10.2	0.3	0.0	chr5	17188981	17189285	(164348974)	C	AluSx1	SINE/Alu	(6)	306	1	3076416
1463	20.4	10.3	1.9	chr5	17189306	17189729	(164348530)	C	MLT1C	LTR/ERVL-MaLR	(3)	464	1	3076417
27	19.1	4.7	5.4	chr5	37371280	37371385	(144166874)	+	G-rich	Low_complexity	1	111	(0)	3104376
1437	20.1	6.8	7.5	chr5	57122774	57123158	(124415101)	+	MLT1D	LTR/ERVL-MaLR	58	445	(60)	3126148
2349	9.0	0.7	0.3	chr5	57123159	57123459	(124414800)	C	AluY	SINE/Alu	(8)	303	2	3126156
1381	24.5	7.4	4.9	chr5	68397345	68397791	(113140468)	+	MLT1C	LTR/ERVL-MaLR	6	464	(3)	3142188
1676	19.3	9.9	1.8	chr5	69316194	69316573	(112221686)	+	MLT1D	LTR/ERVL-MaLR	1	414	(91)	3143754
249	18.4	0.0	2.0	chr5	69316570	69316618	(112221641)	C	7SLRNA	srpRNA	(10)	310	263	3143755
1151	15.2	1.1	1.6	chr5	69316619	69316802	(112221457)	C	AluJr4	SINE/Alu	(119)	193	11	3143756
548	11.2	0.0	0.0	chr5	69316811	69316890	(112221369)	+	MLT1D	LTR/ERVL-MaLR	399	478	(27)	3143754
12	15.1	0.0	12.3	chr5	72106992	72107048	(109431211)	+	G-rich	Low_complexity	1	57	(0)	3148505
17	4.3	0.0	0.0	chr5	72107258	72107281	(109430978)	+	(TCC)n	Simple_repeat	1	24	(0)	3148506
16	21.0	4.1	5.3	chr5	72107366	72107438	(109430821)	+	(CGCGGAG)n	Simple_repeat	1	76	(0)	3148507
1356	19.3	14.8	3.8	chr5	73184523	73184893	(108353366)	+	MLT1D	LTR/ERVL-MaLR	23	441	(64)	3150127
30	2.5	5.0	0.0	chr5	73184899	73184938	(108353321)	+	(TTGTT)n	Simple_repeat	1	42	(0)	3150128
1964	1.0	0.0	0.0	chr5	73184939	73185147	(108353112)	C	AluYa5	SINE/Alu	(28)	283	75	3150129
598	16.7	0.0	14.8	chr5	73318117	73318278	(108219981)	+	L1MA5	LINE/L1	6163	6300	(0)	3150314
666	19.3	15.0	3.8	chr5	73318306	73318488	(108219771)	C	MLT1D	LTR/ERVL-MaLR	(118)	387	181	3150313
1724	23.4	8.4	3.0	chr5	74224216	74224686	(107313573)	+	MLT1D	LTR/ERVL-MaLR	7	505	(0)	3151662
126	36.8	1.7	1.1	chr5	80959490	80960133	(100578126)	+	(TG)n	Simple_repeat	1	655	(0)	3162482
1596	22.1	10.9	3.7	chr5	84788771	84789234	(96749025)	C	MLT1D	LTR/ERVL-MaLR	(3)	502	1	3167710
360	19.7	0.0	0.0	chr5	87400937	87400999	(94137260)	C	MER20	DNA/hAT-Charlie	(0)	219	157	3171080
1191	23.6	4.0	3.4	chr5	87401000	87401324	(94136935)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	179	3171081
2183	18.7	3.8	6.5	chr5	93405083	93405602	(88132657)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	3178645
1690	16.7	6.4	2.7	chr5	105710851	105711149	(75827110)	+	AluJb	SINE/Alu	2	312	(0)	3194172
1549	25.8	4.0	2.7	chr5	105711150	105711424	(75826835)	+	MLT1D	LTR/ERVL-MaLR	228	493	(12)	3194171
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
2246	19.4	2.7	5.3	chr5	113192873	113193363	(68344896)	C	MLT1D	LTR/ERVL-MaLR	(7)	498	21	3203944
1765	14.0	11.6	3.6	chr5	115293079	115293464	(66244795)	+	L1MA7	LINE/L1	5869	6289	(2)	3206579
1297	20.1	10.8	1.6	chr5	115293472	115293774	(66244485)	C	MLT1D	LTR/ERVL-MaLR	(118)	387	54	3206580
2467	28.8	12.9	6.4	chr5	133214381	133215597	(48322662)	+	L2	LINE/L2	1203	2514	(905)	3230710
2023	18.7	8.9	4.0	chr5	133215598	133216076	(48322183)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	3230713
32	14.9	1.6	0.0	chr5	134012023	134012083	(47526176)	+	A-rich	Low_complexity	1	62	(0)	3231746
1359	18.0	0.7	7.2	chr5	134012085	134012377	(47525882)	+	MLT1D	LTR/ERVL-MaLR	232	505	(0)	3231741
1523	22.0	9.4	5.9	chr5	146083116	146083555	(35454704)	C	MLT1C	LTR/ERVL-MaLR	(9)	458	2	3251833
2213	13.4	0.0	0.0	chr5	154668305	154668602	(26869657)	C	AluSx1	SINE/Alu	(14)	298	1	3267731
1373	19.7	3.8	10.1	chr5	154668603	154668998	(26869261)	C	MLT1D	LTR/ERVL-MaLR	(111)	394	1	3267729
436	32.6	3.1	3.5	chr5	154669022	154669218	(26869041)	C	L2c	LINE/L2	(193)	3182	2987	3267723
465	28.1	7.7	0.9	chr5	168485905	168486154	(13052105)	+	L2a	LINE/L2	3113	3426	(0)	3290164
332	40.4	3.2	8.4	chr5	168747039	168747465	(12790794)	+	L2b	LINE/L2	2972	3375	(0)	3290690
1797	19.8	9.3	0.9	chr5	171613783	171614205	(9924054)	+	MLT1C	LTR/ERVL-MaLR	6	467	(0)	3295679
502	35.1	0.6	1.2	chr5	171614212	171614381	(9923878)	C	MIRb	SINE/MIR	(75)	193	25	3295680
54	0.0	0.0	0.0	chr5	171778448	171778493	(9759766)	+	(CA)n	Simple_repeat	1	46	(0)	3296021
1319	25.4	9.5	6.4	chr5	171778494	171778771	(9759488)	+	MLT1D	LTR/ERVL-MaLR	200	505	(0)	3296019
658	25.2	6.3	2.9	chr5	173362956	173363375	(8174884)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	3299468
1273	23.0	12.7	2.1	chr5	173693562	173693988	(7844271)	+	MLT1D	LTR/ERVL-MaLR	27	505	(0)	3300072
433	28.8	2.3	4.0	chr5	173694031	173694207	(7844052)	C	MIRc	SINE/MIR	(91)	177	4	3300073
1574	21.3	12.5	2.0	chr5	174484460	174484910	(7053349)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	3301574
1000	25.9	11.1	8.1	chr5	177580329	177580698	(3957561)	+	MLT1D	LTR/ERVL-MaLR	104	496	(9)	3307675
1582	21.1	10.3	2.2	chr5	178431376	178431835	(3106424)	+	MLT1D	LTR/ERVL-MaLR	4	505	(0)	3309157
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
1412	19.2	9.0	2.0	chr6	1699493	1699843	(169106136)	C	MLT1D	LTR/ERVL-MaLR	(127)	378	1	3316484
1834	8.0	1.2	0.8	chr6	2050871	2051122	(168754857)	+	L1PA6	LINE/L1	5902	6154	(0)	3316899
894	18.8	10.0	1.9	chr6	2051134	2051344	(168754635)	+	MLT1D	LTR/ERVL-MaLR	269	498	(7)	3316897
1791	21.9	7.7	2.5	chr6	3412600	3413077	(167392902)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	3318850
462	27.7	15.9	1.0	chr6	3413078	3413496	(167392483)	C	LTR33	LTR/ERVL	(11)	504	18	3318851
1429	21.9	8.2	4.9	chr6	14030945	14031286	(156774693)	+	MLT1C	LTR/ERVL-MaLR	110	467	(0)	3335326
1920	11.6	0.0	8.2	chr6	14144153	14144470	(156661509)	+	AluJr	SINE/Alu	1	292	(20)	3335533
1401	21.4	7.6	8.0	chr6	14185403	14185864	(156620115)	+	MLT1C	LTR/ERVL-MaLR	8	467	(0)	3335590
25	25.2	0.0	3.5	chr6	15245200	15245284	(155560695)	+	G-rich	Low_complexity	1	85	(0)	3337657
1939	21.9	3.4	5.4	chr6	16084014	16084529	(154721450)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	3338973
1742	22.6	4.4	3.6	chr6	21719159	21719653	(149086326)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	7	3348167
1485	13.7	21.4	1.0	chr6	28355624	28355921	(142450058)	C	HERVL18-int	LTR/ERVL	(3570)	2477	2119	3358499
1171	17.5	17.7	1.4	chr6	28355921	28356282	(142449697)	C	HERVL18-int	LTR/ERVL	(4237)	1810	1390	3358499
859	24.9	4.2	2.4	chr6	33836986	33837240	(136968739)	C	MLT1K	LTR/ERVL-MaLR	(1)	594	335	3367202
1273	23.6	12.1	5.9	chr6	33837252	33837723	(136968256)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	3367203
1028	23.2	15.9	3.4	chr6	37248792	37249228	(133556751)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	4	3374342
15	18.1	3.1	0.0	chr6	43247644	43247675	(127558304)	+	(GT)n	Simple_repeat	1	33	(0)	3385001
12	23.5	2.5	0.0	chr6	53544953	53544992	(117260987)	+	(GCGGCG)n	Simple_repeat	1	41	(0)	3400326
2355	18.8	4.0	4.2	chr6	99520065	99520570	(71285409)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	3457773
1500	23.4	9.9	4.6	chr6	105562518	105562992	(65242987)	+	MLT1D	LTR/ERVL-MaLR	3	505	(0)	3465605
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
17	15.7	5.5	6.5	chr6	122610433	122610505	(48195474)	+	(GAGCGC)n	Simple_repeat	1	77	(0)	3490622
2230	12.5	0.0	0.7	chr6	143213489	143213816	(27592163)	C	AluSx1	SINE/Alu	(0)	312	1	3519542
963	27.7	8.2	4.1	chr6	144013483	144013949	(26792030)	C	MLT1D	LTR/ERVL-MaLR	(10)	495	8	3520702
17	31.7	2.0	4.0	chr6	149749714	149749812	(21056167)	+	(GCGGCG)n	Simple_repeat	1	101	(0)	3529085
2162	13.4	0.0	0.0	chr6	151134660	151134949	(19671030)	+	AluSz	SINE/Alu	3	292	(20)	3531378
737	23.8	11.2	3.5	chr6	151135047	151135333	(19670646)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	156	3531379
2055	11.4	0.0	0.0	chr6	151135342	151135613	(19670366)	C	AluSx1	SINE/Alu	(0)	312	41	3531380
2225	10.8	0.3	0.3	chr6	151146380	151146674	(19659305)	+	AluSx1	SINE/Alu	1	295	(17)	3531411
1448	20.6	11.8	5.3	chr6	151146675	151147032	(19658947)	C	MLT1D	LTR/ERVL-MaLR	(112)	393	14	3531410
2046	14.4	0.0	0.0	chr6	154717518	154717809	(16088170)	C	AluSz	SINE/Alu	(7)	305	14	3536922
1138	18.8	11.2	1.9	chr6	154717810	154718102	(16087877)	+	MLT1C	LTR/ERVL-MaLR	169	503	(2)	3536918
344	28.5	10.5	2.8	chr6	154840967	154841107	(15964872)	C	MIRb	SINE/MIR	(80)	188	36	3537143
1569	22.5	4.1	6.1	chr6	154841163	154841636	(15964343)	C	MLT1C	LTR/ERVL-MaLR	(3)	464	1	3537144
837	22.4	6.3	5.0	chr6	157241275	157241686	(13564293)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	3540590
840	24.1	17.5	5.2	chr6	159167334	159167771	(11638208)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	3	3543745
981	24.1	9.0	2.0	chr6	165585385	165585777	(5220202)	+	MLT1D	LTR/ERVL-MaLR	83	505	(0)	3552127
1367	22.2	2.5	6.2	chr6	165585800	165586254	(5219725)	+	LTR56	LTR/ERV1	8	445	(0)	3552128
287	34.6	4.1	1.7	chr7	589091	589240	(158756733)	+	MIR3	SINE/MIR	21	175	(93)	3558547
356	27.6	4.3	5.0	chr7	1356811	1356951	(157989022)	+	L2b	LINE/L2	3205	3344	(31)	3559754
836	29.1	8.0	5.8	chr7	2666615	2666885	(156679088)	C	L2a	LINE/L2	(35)	3391	3102	3561801
1656	19.4	14.9	5.1	chr7	2666886	2667336	(156678637)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	3	3561802
566	25.8	8.7	0.9	chr7	2683162	2683384	(156662589)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	226	3561834
2512	7.1	0.0	0.3	chr7	2683428	2683736	(156662237)	C	AluYj4	SINE/Alu	(2)	309	2	3561835
1741	22.1	2.2	6.3	chr7	9130099	9130623	(150215350)	C	MLT1D	LTR/ERVL-MaLR	(2)	503	1	3573345
1617	23.0	9.5	9.2	chr7	24044472	24044974	(135300999)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	3593305
324	32.3	1.0	0.0	chr7	25954003	25954098	(133391875)	+	MIR	SINE/MIR	5	101	(161)	3596158
2619	17.3	5.8	0.2	chr7	25954109	25954583	(133391390)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	3	3596159
2832	17.6	1.4	1.6	chr7	26879632	26880134	(132465839)	+	MLT1D	LTR/ERVL-MaLR	1	502	(3)	3597667
15	21.2	0.0	0.0	chr7	27113640	27113677	(132232296)	+	(GCTCAG)n	Simple_repeat	1	38	(0)	3598031
732	25.2	5.9	8.9	chr7	44088822	44089101	(115256872)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	182	3623790
360	17.7	3.1	0.0	chr7	57487360	57487421	(101858552)	+	AluYj4	SINE/Alu	226	289	(22)	3642531
351	21.6	1.4	2.7	chr7	57487757	57487830	(101858143)	+	AluJb	SINE/Alu	208	280	(32)	3642532
384	15.6	3.0	0.0	chr7	57489851	57489914	(101856059)	+	AluJo	SINE/Alu	225	290	(22)	3642536
367	17.7	3.1	0.0	chr7	57495408	57495469	(101850504)	+	AluYj4	SINE/Alu	226	289	(22)	3642546
94	10.7	1.1	1.1	chr7	57495470	57495644	(101850329)	+	(GGAAT)n	Simple_repeat	1	177	(0)	3642547
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
29	2.5	0.0	6.5	chr7	58119103	58119148	(101226825)	+	(GATTCCATTC)n	Simple_repeat	1	46	(0)	3643248
288	23.1	1.2	1.9	chr7	65488938	65489682	(93856291)	+	(ATTCC)n	Simple_repeat	1	754	(0)	3647900
351	16.1	3.1	0.0	chr7	65489683	65489744	(93856229)	C	AluYj4	SINE/Alu	(22)	289	226	3647901
84	11.5	0.0	0.0	chr7	65489745	65489886	(93856087)	+	(CCATT)n	Simple_repeat	1	142	(0)	3647902
383	14.3	3.1	0.0	chr7	65489887	65489949	(93856024)	C	AluYj4	SINE/Alu	(22)	289	225	3647903
85	11.3	0.7	0.6	chr7	65489965	65490119	(93855854)	+	(TTCCA)n	Simple_repeat	1	156	(0)	3647904
48	19.0	0.9	2.6	chr7	65490120	65490168	(93855805)	+	(CTCCA)n	Simple_repeat	1	48	(0)	3647905
137	17.4	1.8	1.1	chr7	67374875	67375148	(91970825)	+	GA-rich	Low_complexity	1	279	(0)	3652074
565	20.8	3.8	10.1	chr7	67375150	67375347	(91970626)	+	MLT1D	LTR/ERVL-MaLR	182	366	(139)	3652073
1117	10.5	0.0	3.1	chr7	67375354	67375515	(91970458)	+	AluJr	SINE/Alu	68	224	(88)	3652075
647	13.6	0.0	1.0	chr7	67375532	67375635	(91970338)	+	MLT1D	LTR/ERVL-MaLR	402	504	(1)	3652073
290	20.9	9.4	2.5	chr7	73353000	73353117	(85992856)	C	MLT1D	LTR/ERVL-MaLR	(198)	307	181	3664412
1189	9.1	1.1	2.1	chr7	74492470	74492660	(84853313)	C	L1PA13	LINE/L1	(662)	5501	5313	3667221
1564	22.0	4.0	9.6	chr7	74492661	74492950	(84853023)	C	MLT1D	LTR/ERVL-MaLR	(52)	453	194	3667219
688	15.0	0.0	13.6	chr7	74492951	74493090	(84852883)	C	AluJr	SINE/Alu	(190)	122	2	3667225
1246	24.1	9.8	3.5	chr7	81077164	81077537	(78268436)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	106	3679060
400	10.8	0.2	2.5	chr7	98810993	98811637	(60534336)	+	(TGG)n	Simple_repeat	1	646	(0)	3703453
39	2.7	0.0	0.0	chr7	121413682	121413719	(37932254)	+	(TA)n	Simple_repeat	1	38	(0)	3737636
1061	25.2	12.9	2.1	chr7	121413746	121414179	(37931794)	C	MLT1D	LTR/ERVL-MaLR	(17)	488	1	3737637
1764	19.7	5.0	3.2	chr7	129567207	129567583	(29778390)	+	MLT1D	LTR/ERVL-MaLR	122	505	(0)	3749427
2242	22.7	5.4	7.4	chr7	129567584	129567892	(29778081)	+	MLT1D-int	LTR/ERVL-MaLR	1	300	(1071)	3749427
1714	20.3	11.2	1.2	chr7	139636361	139636778	(19709195)	+	MLT1C	LTR/ERVL-MaLR	1	465	(2)	3765962
1583	31.7	7.5	3.4	chr7	139636779	139637721	(19708252)	+	L2c	LINE/L2	2292	3425	(1)	3765961
23	15.1	0.0	2.2	chr7	140479183	140479228	(18866745)	+	(GCC)n	Simple_repeat	1	46	(0)	3767540
13	21.8	0.0	0.0	chr7	140479268	140479300	(18866673)	+	(GCTGCC)n	Simple_repeat	1	33	(0)	3767541
2078	22.5	3.6	2.0	chr7	141016349	141016843	(18329130)	C	MLT1D	LTR/ERVL-MaLR	(2)	503	1	3768632
1997	18.9	7.5	4.3	chr7	149470827	149471291	(9874682)	+	MLT1D	LTR/ERVL-MaLR	1	481	(24)	3780747
36	0.0	0.0	0.0	chr7	149471292	149471324	(9874649)	+	(CAG)n	Simple_repeat	1	33	(0)	3780748
1499	23.4	9.9	3.7	chr7	149506236	149506669	(9839304)	C	MLT1C	LTR/ERVL-MaLR	(3)	464	1	3780793
16	13.4	0.0	2.9	chr7	149714673	149714707	(9631266)	+	G-rich	Low_complexity	1	35	(0)	3781084
1113	22.2	14.8	3.2	chr7	151300812	151301252	(8044721)	+	MLT1D	LTR/ERVL-MaLR	1	501	(4)	3783202
283	28.6	0.0	8.7	chr7	151301253	151301290	(8044683)	+	MIRb	SINE/MIR	118	149	(119)	3783201
1251	23.9	7.0	6.3	chr7	155659740	155660082	(3685891)	C	MLT1C	LTR/ERVL-MaLR	(29)	438	89	3789960
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
1402	22.9	11.7	1.6	chr8	6711591	6712026	(138426610)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	20	3802490
1454	22.3	8.0	3.2	chr8	37332619	37333021	(107805615)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	82	3850154
1286	23.2	4.9	1.2	chr8	37376375	37376710	(107761926)	C	MLT1C	LTR/ERVL-MaLR	(3)	464	116	3850221
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2352	20.9	0.2	3.1	chr8	57391599	57392116	(87746520)	+	MLT1D	LTR/ERVL-MaLR	1	503	(2)	3875228
1681	22.5	7.6	0.9	chr8	65826703	65827132	(79311504)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	7	3886472
1719	21.1	9.9	4.2	chr8	67947622	67948096	(77190540)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	3890053
32	0.0	3.0	0.0	chr8	76854246	76854278	(68284358)	+	(CCACAG)n	Simple_repeat	1	34	(0)	3902726
1967	24.0	2.0	2.9	chr8	77005751	77006260	(68132376)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	3902939
20234	9.7	0.2	0.5	chr8	85650406	85654067	(59484569)	C	L1PA5	LINE/L1	(2)	6152	2507	3914920
9953	10.6	0.1	0.7	chr8	85742400	85743923	(59394713)	C	L1P1	LINE/L1	(2125)	4021	2507	3914963
2008	28.6	6.2	3.3	chr8	96207486	96208068	(48930568)	+	L2a	LINE/L2	2301	2897	(522)	3929910
1216	24.3	16.7	2.3	chr8	96208069	96208498	(48930138)	C	MLT1D	LTR/ERVL-MaLR	(1)	504	1	3929911
1637	20.8	11.5	3.7	chr8	101014228	101014691	(44123945)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	3937985
514	23.6	4.3	7.7	chr8	101014692	101014791	(44123845)	C	LTR16C	LTR/ERVL	(72)	466	350	3937984
2323	9.6	0.0	1.3	chr8	102489987	102490289	(42648347)	+	AluY	SINE/Alu	1	299	(12)	3940465
835	21.0	6.5	0.5	chr8	102490290	102490307	(42648329)	+	MLT1C	LTR/ERVL-MaLR	187	204	(263)	3940464
40	18.3	0.0	0.0	chr8	102490308	102490387	(42648249)	+	(CACACA)n	Simple_repeat	1	80	(0)	3940466
1317	21.7	1.4	1.1	chr8	102490388	102490666	(42647970)	+	MLT1C	LTR/ERVL-MaLR	187	466	(1)	3940464
21	22.1	0.0	1.8	chr8	102655972	102656027	(42482609)	+	(CGCCCCC)n	Simple_repeat	1	56	(0)	3940829
12	12.0	3.7	0.0	chr8	102656127	102656153	(42482483)	+	(CCGCT)n	Simple_repeat	1	28	(0)	3940830
1349	19.8	8.7	6.3	chr8	102714131	102714545	(42424091)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	42	3940959
1030	27.2	8.2	4.8	chr8	112045216	112045697	(33092939)	+	MLT1D	LTR/ERVL-MaLR	6	505	(0)	3954295
1978	18.3	9.1	4.4	chr8	128035565	128036044	(17102592)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	3980656
1418	21.6	14.5	4.4	chr8	132096050	132096499	(13042137)	C	MLT1D	LTR/ERVL-MaLR	(2)	503	1	3987896
1841	15.2	3.6	0.0	chr8	142670842	142671164	(2467472)	C	MER2	DNA/TcMar-Tigger	(0)	345	11	4005163
1435	18.4	4.0	2.0	chr8	142671243	142671536	(2467100)	+	MLT1D	LTR/ERVL-MaLR	206	505	(0)	4005162
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
226	12.1	0.0	0.0	chr8	143669745	143669777	(1468859)	+	Alu	SINE/Alu	2	34	(99)	4006490
303	13.6	4.3	2.9	chr8	143669777	143669844	(1468792)	C	MSTA	LTR/ERVL-MaLR	(175)	253	185	4006491
2192	17.0	7.9	4.0	chr9	19057112	19057559	(119337158)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	4035465
482	22.4	3.6	4.3	chr9	19057560	19057592	(119337125)	C	L1MC5a	LINE/L1	(110)	2667	2637	4035464
20	0.0	0.0	0.0	chr9	33290002	33290023	(105104694)	+	(A)n	Simple_repeat	1	22	(0)	4055138
1530	15.1	8.3	0.7	chr9	33290031	33290308	(105104409)	+	AluJr	SINE/Alu	2	302	(10)	4055139
1628	10.6	2.1	0.8	chr9	35657504	35657740	(102736977)	+	AluJb	SINE/Alu	1	240	(72)	4059251
1643	24.1	8.7	2.7	chr9	36875526	36875999	(101518718)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	4061619
325	35.6	6.8	5.1	chr9	36876000	36876141	(101518576)	C	L2a	LINE/L2	(251)	3175	3021	4061618
296	22.0	5.7	2.5	chr9	41229379	41230391	(97164326)	+	(TG)n	Simple_repeat	1	1071	(0)	4068370
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
235	23.8	4.5	3.8	chr9	63823016	63823908	(74570809)	+	(CA)n	Simple_repeat	1	933	(0)	4074777
268	8.8	1.9	1.9	chr9	70038166	70038638	(68356079)	+	(TGGAA)n	Simple_repeat	1	482	(0)	4082515
253	26.1	0.0	0.0	chr9	70038639	70038703	(68356014)	+	MER102a	DNA/hAT-Charlie	90	154	(176)	4082516
296	26.2	1.9	3.7	chr9	70038730	70038836	(68355881)	+	MER102c	DNA/hAT-Charlie	201	305	(26)	4082517
12	11.1	3.2	3.1	chr9	70420323	70420353	(67974364)	+	(CCCGCG)n	Simple_repeat	1	32	(0)	4083114
77	8.8	0.0	0.0	chr9	76175202	76175310	(62219407)	+	(GAATG)n	Simple_repeat	1	109	(0)	4092041
20	6.9	0.0	0.0	chr9	76175311	76175341	(62219376)	+	(AGAAC)n	Simple_repeat	1	31	(0)	4092042
565	29.3	5.5	2.0	chr9	76175445	76175744	(62218973)	C	L1M5	LINE/L1	(317)	5807	5497	4092043
2159	18.1	1.7	1.0	chr9	79337833	79338235	(59056482)	+	MLT1C	LTR/ERVL-MaLR	62	467	(0)	4097097
261	31.9	13.9	2.7	chr9	79379598	79379680	(59015037)	C	MIRb	SINE/MIR	(12)	256	164	4097170
1727	16.6	12.9	2.4	chr9	79379681	79380131	(59014586)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	4097171
1158	22.3	10.6	2.6	chr9	85297790	85298183	(53096534)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	81	4106011
1880	20.1	4.1	6.3	chr9	89566142	89566614	(48828103)	+	MLT1C	LTR/ERVL-MaLR	6	467	(0)	4112673
845	26.5	5.0	10.2	chr9	89566635	89566827	(48827890)	C	Charlie2b	DNA/hAT-Charlie	(427)	2355	2153	4112671
231	30.2	15.3	4.8	chr9	91341648	91342047	(47052670)	C	L2a	LINE/L2	(3)	3423	2974	4115035
1841	16.7	18.1	0.2	chr9	91342056	91342469	(47052248)	C	MLT1D	LTR/ERVL-MaLR	(1)	504	1	4115036
2094	20.5	0.6	8.7	chr9	94858331	94858602	(43536115)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	247	4120399
1056	22.6	4.0	16.0	chr9	94858603	94858766	(43535951)	+	MLT1A1	LTR/ERVL-MaLR	1	150	(258)	4120400
709	21.8	13.6	12.6	chr9	109042223	109042388	(29352329)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	321	4143703
634	15.2	0.0	0.0	chr9	109042389	109042487	(29352230)	C	HY3	scRNA	(2)	99	1	4143704
709	21.8	13.6	12.6	chr9	109042488	109042646	(29352071)	C	MLT1D	LTR/ERVL-MaLR	(185)	320	176	4143703
486	18.2	4.3	0.0	chr9	109042656	109042765	(29351952)	C	L1MB7	LINE/L1	(16)	6168	6054	4143705
1835	21.1	5.0	6.2	chr9	111316162	111316673	(27078044)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	4147668
1776	23.1	5.1	3.0	chr9	111316676	111317116	(27077601)	+	Charlie1a	DNA/hAT-Charlie	18	478	(977)	4147669
519	23.9	5.6	2.9	chr9	114469464	114469670	(23925047)	+	LTR16	LTR/ERVL	100	312	(126)	4153728
1545	22.1	9.8	2.4	chr9	114469723	114470148	(23924569)	C	MLT1D	LTR/ERVL-MaLR	(17)	488	28	4153729
1741	20.5	4.3	8.3	chr9	128008124	128008579	(10386138)	+	MLT1D	LTR/ERVL-MaLR	1	448	(57)	4179532
1631	18.4	4.8	7.6	chr9	128113522	128113996	(10280721)	+	MLT1D	LTR/ERVL-MaLR	1	461	(44)	4179791
357	34.5	3.9	2.2	chr9	129182497	129182674	(9212043)	C	MIR3	SINE/MIR	(25)	183	3	4182253
270	19.9	0.7	0.2	chr9	130958574	130959111	(7435606)	+	(CACCAC)n	Simple_repeat	1	542	(0)	4186091
1021	29.3	8.6	4.9	chr9	133671971	133672415	(4722302)	C	MLT1C	LTR/ERVL-MaLR	(4)	463	1	4190929
286	8.8	9.5	2.4	chr9	134182441	134183092	(4211625)	+	(TG)n	Simple_repeat	1	714	(0)	4191688
1567	24.7	4.9	3.0	chr9	134571507	134571965	(3822752)	C	MLT1D	LTR/ERVL-MaLR	(7)	498	31	4192192
27	22.2	2.0	5.0	chr9	136245858	136245955	(2148762)	+	(CGCCCC)n	Simple_repeat	1	100	(0)	4194185
243	4.6	0.0	2.1	chr9	137355408	137355734	(1038983)	+	(GAGGAAG)n	Simple_repeat	1	327	(0)	4195528
2510	18.5	2.4	1.8	chrX	15417523	15418024	(140622871)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	4384338
2086	16.4	0.0	0.0	chrX	16686622	16686933	(139353962)	+	AluJb	SINE/Alu	1	312	(0)	4386464
1547	21.7	5.4	8.1	chrX	16686934	16687184	(139353711)	+	MLT1C	LTR/ERVL-MaLR	232	467	(0)	4386463
2245	19.9	3.4	2.4	chrX	39701742	39702240	(116338655)	+	MLT1D	LTR/ERVL-MaLR	1	504	(1)	4421006
1154	27.0	12.6	4.2	chrX	40219913	40220001	(115820894)	C	MLT1G	LTR/ERVL-MaLR	(270)	321	231	4421999
1842	19.5	5.2	15.4	chrX	40220002	40220435	(115820460)	C	MLT1C	LTR/ERVL-MaLR	(2)	465	97	4422001
13	19.6	0.0	0.0	chrX	56995464	56995493	(99045402)	+	(GGC)n	Simple_repeat	1	30	(0)	4448724
1791	14.4	0.0	6.2	chrX	72245164	72245469	(83795426)	C	AluJr4	SINE/Alu	(25)	287	1	4462968
15	21.4	4.4	0.0	chrX	73944061	73944105	(82096790)	+	A-rich	Low_complexity	1	47	(0)	4464970
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
1568	19.0	1.4	0.4	chrX	104234696	104234969	(51805926)	+	AluJr	SINE/Alu	3	279	(33)	4499799
902	19.1	17.2	5.9	chrX	104234970	104235211	(51805684)	C	MLT1D	LTR/ERVL-MaLR	(80)	425	139	4499798
1469	25.1	9.5	3.4	chrX	113436220	113436685	(42604210)	+	MLT1D	LTR/ERVL-MaLR	1	497	(8)	4512789
291	27.1	6.6	0.0	chrX	113436693	113436777	(42604118)	C	L1MB8	LINE/L1	(25)	6153	6063	4512790
1949	13.5	5.2	5.7	chrX	118821872	118822256	(37218639)	+	MLT1B	LTR/ERVL-MaLR	8	390	(0)	4519951
788	22.9	14.1	2.6	chrX	118822260	118822658	(37218237)	C	MLT1D	LTR/ERVL-MaLR	(21)	484	4	4519952
23	23.6	0.0	0.0	chrX	119574230	119574279	(36466616)	+	A-rich	Low_complexity	1	50	(0)	4521361
7461	22.0	3.2	3.4	chrX	127953789	127956615	(28084280)	C	L1MB4	LINE/L1	(1309)	4831	2467	4532842
18	28.4	0.0	0.0	chrX	129843496	129843542	(26197353)	+	(CA)n	Simple_repeat	1	47	(0)	4535415
16	18.2	7.6	2.8	chrX	129843543	129843553	(26197342)	+	(ACGCAC)n	Simple_repeat	26	71	(0)	4535414
1406	22.3	12.0	4.3	chrX	134740559	134741018	(21299877)	+	MLT1D	LTR/ERVL-MaLR	6	505	(0)	4543290
1838	19.6	5.8	4.0	chrX	149636628	149637079	(6403816)	+	MLT1C	LTR/ERVL-MaLR	2	462	(5)	4564874
2306	19.6	7.4	0.2	chrX	153597246	153597711	(2443184)	C	MLT1D	LTR/ERVL-MaLR	(3)	502	1	4570452
184	32.9	2.8	1.4	chrX	153646827	153646897	(2393998)	C	MIR3	SINE/MIR	(63)	145	74	4570530
17	17.8	4.4	0.0	chrX	153647123	153647167	(2393728)	+	(CCGCC)n	Simple_repeat	1	47	(0)	4570531
149	10.5	1.4	1.4	chrY	10664579	10664856	(46562559)	+	(CCATT)n	Simple_repeat	1	282	(0)	4587925
28	9.5	0.0	0.0	chrY	10666839	10666883	(46560532)	+	(CACTC)n	Simple_repeat	1	45	(0)	4587932
254	28.6	0.0	0.0	chrY	10671654	10671709	(46555706)	C	AluYj4	SINE/Alu	(32)	279	224	4587946
511	25.4	0.8	0.6	chrY	10671709	10671898	(46555517)	+	(CCATT)n	Simple_repeat	2	193	(0)	4587947
355	22.1	1.4	0.0	chrY	10671899	10671966	(46555449)	C	AluYh9	SINE/Alu	(19)	292	224	4587948
75	7.6	0.0	0.0	chrY	10687986	10688083	(46539332)	+	(ATTCC)n	Simple_repeat	1	98	(0)	4588000
322	25.1	3.0	0.5	chrY	10693618	10693705	(46533710)	C	AluY	SINE/Alu	(7)	295	207	4588025
222	19.6	0.7	0.7	chrY	10693706	10694157	(46533258)	+	(TTCCA)n	Simple_repeat	1	455	(0)	4588026
6112	24.5	0.6	0.4	chrY	10939178	10940587	(46286828)	+	(TTCCA)n	Simple_repeat	5	1415	(0)	4588487
314	22.4	2.9	0.0	chrY	10950282	10950348	(46277067)	C	AluYj4	SINE/Alu	(18)	293	225	4588504
235	26.3	10.9	0.0	chrY	10950303	10950359	(46277056)	+	SVA_A	Retroposon/SVA	332	395	(992)	4588505
4917	25.0	0.5	0.3	chrY	10950360	10951162	(46276253)	+	(TCCAC)n	Simple_repeat	1	804	(0)	4588506
73	12.0	0.0	0.0	chrY	10973565	10973692	(46253723)	+	(TCCAT)n	Simple_repeat	1	128	(0)	4588565
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
294	21.8	0.0	0.0	chrY	11024506	11024560	(46202855)	C	AluYj4	SINE/Alu	(33)	278	224	4588731
320	23.8	1.6	0.5	chrY	11031071	11031156	(46196259)	C	AluY	SINE/Alu	(9)	293	208	4588745
111	22.1	0.4	0.4	chrY	11040359	11040603	(46186812)	+	(CTCCA)n	Simple_repeat	1	246	(0)	4588776
36	2.7	0.0	0.0	chrY	11040620	11040657	(46186758)	+	(TTCCA)n	Simple_repeat	1	38	(0)	4588777
287	25.0	3.0	0.0	chrY	11040658	11040721	(46186694)	C	FRAM	SINE/Alu	(12)	154	89	4588757
64	18.5	0.0	0.0	chrY	11040733	11040855	(46186560)	+	(CCATT)n	Simple_repeat	1	123	(0)	4588778
632	25.3	2.2	1.7	chrY	11282071	11282251	(45945164)	C	MER5A	DNA/hAT-Charlie	(0)	189	8	4589058
1081	32.1	12.4	1.6	chrY	11282268	11282912	(45944503)	+	L2	LINE/L2	916	1640	(1779)	4589056
10957	28.2	0.5	0.1	chrY	26637975	26643170	(30584245)	+	(AATGG)n	Simple_repeat	1	5205	(0)	4607157
10957	28.1	0.5	0.1	chrY	26643208	26653351	(30574064)	+	(AATGG)n	Simple_repeat	1	10181	(0)	4607159
10957	28.2	0.5	0.1	chrY	26653859	26659290	(30568125)	+	(AATGG)n	Simple_repeat	5	5454	(0)	4607165
2520	29.1	0.4	0.0	chrY	26668441	26670861	(30556554)	+	(ATGGA)n	Simple_repeat	1	2429	(0)	4607174