140	18.5	0.7	0.0	chr1	4302955	4302983	(244653439)	+	(TTCCA)n	Simple_repeat	1	31	(0)	5121
64	6.2	1.1	1.1	chr1	4302984	4303071	(244653351)	+	(GTTCC)n	Simple_repeat	1	89	(0)	5122
140	18.5	0.7	0.0	chr1	4303072	4303312	(244653110)	+	(TTCCA)n	Simple_repeat	2	242	(0)	5123
3743	13.4	5.2	8.3	chr1	28133394	28133742	(220822680)	+	LTR8A	LTR/ERV1	387	725	(2)	53334
1052	16.8	19.4	0.0	chr1	28133743	28133944	(220822478)	C	LTR32	LTR/ERVL	(214)	243	1	53333
1041	27.3	15.3	1.1	chr1	30853998	30854434	(218101988)	C	MLT1J	LTR/ERVL-MaLR	(2)	510	1	59229
403	6.7	0.0	0.0	chr1	31431749	31432232	(217524190)	+	(GATAGGGTG)n	Simple_repeat	1	484	(0)	60677
2541	19.6	1.5	2.5	chr1	38422014	38422569	(210533853)	C	MER89	LTR/ERV1	(0)	559	10	74647
2803	21.8	9.8	4.6	chr1	38422584	38423484	(210532938)	+	L1MC4	LINE/L1	6933	7907	(135)	74646
47	26.7	5.5	3.3	chr1	43057583	43057843	(205898579)	+	(GGTGAT)n	Simple_repeat	1	266	(0)	83687
14	21.2	4.0	6.5	chr1	46425227	46425300	(202531122)	+	(TTGTG)n	Simple_repeat	1	77	(0)	90024
521	33.5	17.8	3.6	chr1	52660776	52661237	(196295185)	C	L2c	LINE/L2	(0)	3387	2827	101388
188	33.5	5.5	10.1	chr1	54764221	54764409	(194192013)	C	MIRc	SINE/MIR	(72)	196	17	105841
15	7.5	0.0	6.2	chr1	65067136	65067167	(183889255)	+	(GGCCC)n	Simple_repeat	1	32	(0)	125015
11	18.1	2.4	4.8	chr1	65067257	65067297	(183889125)	+	(GCCCCCG)n	Simple_repeat	1	42	(0)	125016
1758	17.0	5.5	0.0	chr1	88785135	88785423	(160170999)	C	AluJo	SINE/Alu	(6)	306	1	158981
12	18.1	0.0	3.0	chr1	88785607	88785639	(160170783)	+	(AAGTAT)n	Simple_repeat	1	33	(0)	158982
925	31.9	7.3	9.1	chr1	97760703	97761498	(151194924)	+	L1MEi	LINE/L1	140	920	(1292)	172486
3723	16.3	3.6	0.9	chr1	97761499	97762178	(151194244)	+	L1PA15	LINE/L1	5467	6165	(0)	172487
2720	19.2	2.9	0.9	chr1	108190042	108190587	(140765835)	C	MER89	LTR/ERV1	(2)	557	1	186491
1696	17.8	4.4	0.3	chr1	113014831	113015116	(135941306)	C	AluJo	SINE/Alu	(14)	298	1	194275
503	29.9	3.5	1.5	chr1	113015251	113015447	(135940975)	C	L3	LINE/CR1	(479)	3620	3420	194271
622	27.9	10.8	9.5	chr1	113015488	113015952	(135940470)	C	L1ME4b	LINE/L1	(96)	828	348	194276
16710	17.2	2.6	1.3	chr1	119904729	119906805	(129049617)	C	L1M2	LINE/L1	(3924)	2926	830	204723
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
2073	12.6	2.4	0.0	chr1	150297390	150297675	(98658747)	+	AluSx1	SINE/Alu	1	293	(19)	218709
2235	10.2	0.3	0.0	chr1	150297939	150298232	(98658190)	C	AluSp	SINE/Alu	(18)	295	1	218710
14	28.5	3.1	1.5	chr1	171841146	171841210	(77115212)	+	(GGTGCT)n	Simple_repeat	1	67	(0)	253434
18	12.1	0.0	5.0	chr1	171841403	171841442	(77114980)	+	G-rich	Low_complexity	1	40	(0)	253435
2561	15.5	2.8	2.3	chr1	174740557	174741352	(74215070)	C	L1M2	LINE/L1	(625)	5678	4878	257601
2766	18.0	3.8	1.5	chr1	176940149	176940694	(72015728)	+	MER89	LTR/ERV1	1	559	(0)	260924
217	44.4	2.1	2.7	chr1	177124942	177125087	(71831335)	C	L2b	LINE/L2	(6)	3369	3225	261224
9450	12.8	1.0	3.3	chr1	184168201	184170063	(64786359)	C	L1MA3	LINE/L1	(687)	5618	3792	272206
455	13.8	6.0	5.0	chr1	202624116	202625415	(46331007)	+	(GT)n	Simple_repeat	1	1378	(0)	298201
240	25.3	0.0	9.4	chr1	206872228	206872286	(42084136)	+	MIR3	SINE/MIR	77	128	(80)	305839
2933	15.2	4.7	1.5	chr1	206872287	206872827	(42083595)	+	MER89	LTR/ERV1	1	559	(0)	305840
412	21.6	3.0	2.9	chr1	206923601	206924793	(42031629)	+	(GT)n	Simple_repeat	1	1229	(0)	305929
1987	14.1	1.1	1.1	chr1	224011691	224016553	(24939869)	+	(AATGG)n	Simple_repeat	1	4914	(0)	331634
2256	18.2	1.7	1.0	chr1	224884862	224885265	(24071157)	C	MER89	LTR/ERV1	(0)	559	153	333317
1058	7.7	14.8	0.6	chr1	224885266	224885421	(24071001)	C	THE1B	LTR/ERVL-MaLR	(0)	364	183	333318
2728	16.6	4.3	2.0	chr1	224897757	224898302	(24058120)	C	MER89	LTR/ERV1	(0)	559	1	333333
246	19.8	4.9	0.9	chr1	235078154	235078768	(13877654)	+	(TG)n	Simple_repeat	1	645	(0)	348979
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
18	12.2	0.0	0.0	chr1	242343767	242343793	(6612629)	+	(A)n	Simple_repeat	1	27	(0)	360857
2820	18.6	3.9	0.4	chr1	242343912	242344450	(6611972)	+	MER89	LTR/ERV1	1	559	(0)	360858
1859	20.0	3.6	12.8	chr1	246448467	246448946	(2507476)	+	MER89	LTR/ERV1	1	429	(130)	367478
16	0.0	0.0	0.0	chr10	5629780	5629796	(128167626)	+	(A)n	Simple_repeat	1	17	(0)	378034
224	26.6	0.0	5.9	chr10	5630009	5630076	(128167346)	+	MER91C	DNA/hAT-Tip100	77	140	(0)	378035
209	32.3	8.6	2.3	chr10	5630102	5630219	(128167203)	C	L2c	LINE/L2	(4)	3383	3256	378036
1786	19.9	3.6	3.1	chr10	5630220	5630607	(128166815)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	378037
226	34.0	23.0	4.6	chr10	31865170	31865593	(101931829)	C	L2	LINE/L2	(557)	2862	2355	420878
2892	16.4	5.4	0.4	chr10	38251710	38252240	(95545182)	C	MER89	LTR/ERV1	(0)	559	1	430736
1766	11.1	0.0	2.9	chr10	65000869	65001111	(68796311)	C	AluY	SINE/Alu	(39)	272	37	464156
552	32.7	6.0	6.5	chr10	65001114	65001466	(68795956)	+	ERV3-16A3_I-int	LTR/ERVL	3990	4340	(886)	464157
18	25.9	1.3	5.2	chr10	91410354	91410429	(42386993)	+	(CGC)n	Simple_repeat	1	77	(0)	507282
257	31.2	20.9	0.6	chr10	98134109	98134440	(35662982)	C	L2a	LINE/L2	(1177)	2242	1826	519432
289	31.7	7.1	7.8	chr10	112049064	112049834	(21747588)	+	LTR85a	LTR/Gypsy?	1	808	(15)	542071
2458	16.3	8.9	2.1	chr10	112840011	112840530	(20956892)	+	MER89	LTR/ERV1	1	559	(0)	543291
1636	19.7	2.4	1.4	chr10	125917802	125918095	(7879327)	+	AluJo	SINE/Alu	2	298	(14)	564212
1265	13.4	1.5	9.3	chr10	125918096	125918275	(7879147)	+	L1MB3	LINE/L1	5974	6143	(40)	564208
268	14.3	19.8	6.1	chr10	131777615	131777696	(2019726)	C	LTR10B2	LTR/ERV1	(262)	285	190	570922
301	31.1	4.5	4.0	chr10	131777789	131778051	(2019371)	C	MER89	LTR/ERV1	(326)	233	67	570923
12	11.5	3.3	3.2	chr10	131778343	131778372	(2019050)	+	G-rich	Low_complexity	1	31	(0)	570924
101	23.0	6.5	5.3	chr10	132364294	132364784	(1432638)	+	(CACTCA)n	Simple_repeat	1	557	(29)	571577
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
770	9.7	1.9	0.0	chr11	17203687	17203789	(117882833)	C	AluJo	SINE/Alu	(21)	291	187	598277
2508	6.0	0.0	0.7	chr11	17203791	17204091	(117882531)	+	AluY	SINE/Alu	1	299	(12)	598278
275	30.6	4.5	3.3	chr11	32508643	32508794	(102577828)	C	Charlie22a	DNA/hAT-Charlie	(316)	175	22	621744
835	23.7	3.7	6.3	chr11	36510956	36511169	(98575453)	+	MIR	SINE/MIR	8	222	(40)	628546
1985	16.8	0.0	0.7	chr11	36511170	36511479	(98575143)	+	AluJr	SINE/Alu	1	308	(4)	628547
2269	11.7	0.3	0.0	chr11	46638976	46639284	(88447338)	C	AluSx3	SINE/Alu	(0)	311	2	644364
267	12.8	11.3	0.0	chr11	46639287	46639333	(88447289)	C	L1M2	LINE/L1	(510)	5781	5729	644365
644	17.0	15.7	8.5	chr11	46639334	46639513	(88447109)	C	MER89	LTR/ERV1	(327)	232	34	644360
2605	16.3	7.5	4.3	chr11	46639514	46639853	(88446769)	C	LTR26B	LTR/ERV1	(0)	531	202	644366
12	7.5	16.7	0.0	chr11	59615393	59615434	(75471188)	+	(CGAGCC)n	Simple_repeat	1	49	(0)	657081
1069	23.6	13.1	5.9	chr11	70371122	70371431	(64715191)	C	L1MD	LINE/L1	(3227)	2919	2548	676745
616	22.2	3.5	4.0	chr11	70371541	70371742	(64714880)	C	L1M4	LINE/L1	(3463)	2683	2483	676741
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
18300	3.7	0.3	0.1	chr11	94238529	94241278	(40845344)	C	L1PA4	LINE/L1	(372)	5782	3028	716863
450	21.5	9.4	0.7	chr11	123315805	123315940	(11770682)	C	MIRb	SINE/MIR	(1)	267	119	761307
548	2.3	1.2	1.4	chr12	10001	10585	(133264724)	+	(CTAACC)n	Simple_repeat	1	592	(0)	778084
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
8079	21.5	4.2	5.2	chr12	15175389	15176145	(118099164)	C	L1MB8	LINE/L1	(6725)	792	18	802443
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
241	32.9	4.0	0.3	chr12	53353057	53353166	(79922143)	C	L2b	LINE/L2	(9)	3378	3258	854541
2721	15.7	6.6	0.8	chr12	56753397	56753922	(76521387)	C	MER89	LTR/ERV1	(0)	559	1	860187
904	17.7	1.2	0.0	chr12	69330827	69330984	(63944325)	C	HERVK22-int	LTR/ERVK	(4348)	2489	2330	879077
3640	14.0	5.0	5.8	chr12	69331227	69331955	(63943354)	C	HERVK22-int	LTR/ERVK	(6078)	759	37	879077
278	33.8	8.7	8.2	chr12	72495087	72495257	(60780052)	+	L2c	LINE/L2	2537	2705	(714)	883912
484	33.2	10.4	6.8	chr12	72495422	72495744	(60779565)	+	L2c	LINE/L2	3052	3387	(0)	883912
2572	19.9	1.3	1.5	chr12	85606675	85607086	(47668223)	C	MER89	LTR/ERV1	(144)	415	4	901862
375	29.6	0.8	2.3	chr12	90085580	90085707	(43189602)	+	MIRb	SINE/MIR	107	232	(36)	908033
2577	20.5	2.0	1.1	chr12	109341436	109341988	(23933321)	C	MER89	LTR/ERV1	(1)	558	1	942335
612	29.0	8.9	1.5	chr13	34028821	34029079	(80335249)	C	L2a	LINE/L2	(9)	3417	3138	1015197
2658	19.2	0.6	4.0	chr13	34029080	34029648	(80334680)	+	MER89	LTR/ERV1	1	549	(10)	1015198
2570	19.3	1.3	2.5	chr13	34637233	34637789	(79726539)	C	MER89	LTR/ERV1	(0)	559	10	1016069
516	20.0	12.0	0.0	chr13	42877495	42877619	(71486709)	+	L2a	LINE/L2	3259	3400	(26)	1028037
1111	11.4	3.5	1.0	chr13	42877621	42877815	(71486513)	C	MER67C	LTR/ERV1	(3)	708	509	1028038
583	22.6	4.6	6.4	chr13	43875322	43875477	(70488851)	+	MLT1D	LTR/ERVL-MaLR	1	153	(352)	1029454
1573	18.7	17.2	0.2	chr13	43875479	43875947	(70488381)	+	MER89	LTR/ERV1	6	559	(0)	1029455
16	21.6	0.0	0.0	chr13	44436971	44437002	(69927326)	+	(C)n	Simple_repeat	1	32	(0)	1030298
22	12.4	2.2	2.1	chr13	48233085	48233141	(66131187)	+	(CCCCGC)n	Simple_repeat	1	57	(0)	1036514
20	22.2	7.1	1.1	chr13	48233248	48233332	(66130996)	+	(GCAGCCC)n	Simple_repeat	1	91	(0)	1036515
2039	19.2	1.6	0.3	chr13	51881545	51881904	(62482424)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	1042252
1367	8.2	2.1	0.0	chr13	62753167	62753414	(51610914)	C	L1P1	LINE/L1	(2535)	5460	5204	1056390
1620	23.3	7.5	3.2	chr13	65255813	65256308	(49108020)	+	LTR40a	LTR/ERVL	1	519	(0)	1059549
514	29.4	10.7	8.4	chr13	65256309	65256858	(49107470)	C	Charlie2a	DNA/hAT-Charlie	(1760)	1101	531	1059548
259	38.9	5.5	7.4	chr13	66998380	66998840	(47365488)	+	L2c	LINE/L2	2328	2779	(640)	1061725
829	21.5	0.6	0.0	chr13	67221916	67222073	(47142255)	+	MER5A	DNA/hAT-Charlie	2	160	(29)	1062002
1376	22.8	12.2	2.9	chr13	68152555	68153101	(46211227)	C	L1MB4	LINE/L1	(5042)	1565	961	1063171
287	16.2	4.2	0.0	chr13	68153117	68153184	(46211144)	C	L1M4b	LINE/L1	(5264)	1603	1533	1063172
485	26.2	16.0	2.9	chr13	68153228	68153541	(46210787)	+	L1ME2	LINE/L1	1798	2160	(4848)	1063170
14	23.6	1.9	3.7	chr13	78507636	78507688	(35856640)	+	(ACC)n	Simple_repeat	1	54	(0)	1077646
15	18.3	0.0	6.1	chr13	78507703	78507751	(35856577)	+	(CTTTTTA)n	Simple_repeat	1	49	(0)	1077647
1913	23.5	8.5	2.7	chr13	85228536	85229122	(29135206)	+	MER45B	DNA/hAT-Tip100	411	1034	(6)	1086265
990	32.7	4.6	4.5	chr13	88172880	88173245	(26191083)	C	MLT1H	LTR/ERVL-MaLR	(32)	517	165	1089970
2228	19.2	14.1	0.6	chr13	88173246	88173728	(26190600)	+	MER89	LTR/ERV1	1	559	(0)	1089971
8274	12.2	1.7	1.7	chr13	88881170	88883250	(25481078)	C	L1MA2	LINE/L1	(168)	6136	4047	1090878
1464	30.0	12.3	1.2	chr13	93066832	93067735	(21296593)	C	L2a	LINE/L2	(88)	3338	2325	1096388
366	33.3	1.6	1.2	chr13	93067849	93067982	(21296346)	+	L2c	LINE/L2	3224	3360	(15)	1096394
15	0.0	4.5	0.0	chr13	94545239	94545250	(19819078)	+	(AT)n	Simple_repeat	1	13	(0)	1098488
2351	18.8	8.3	1.2	chr13	94545251	94545761	(19818567)	+	MER89	LTR/ERV1	5	555	(4)	1098489
2265	20.3	5.9	2.4	chr13	103123678	103124216	(11240112)	+	MER89	LTR/ERV1	1	559	(0)	1111772
4915	17.5	3.0	3.4	chr14	21695769	21697268	(85346450)	+	L1MB5	LINE/L1	4350	5834	(340)	1130262
1979	12.6	0.0	0.3	chr14	24360147	24360432	(82683286)	+	AluSx1	SINE/Alu	17	301	(11)	1134144
2614	16.5	2.3	9.8	chr14	24360433	24360903	(82682815)	+	MER89	LTR/ERV1	139	559	(0)	1134143
2723	18.7	3.2	3.2	chr14	30331072	30331630	(76712088)	+	MER89	LTR/ERV1	1	559	(0)	1141682
380	5.9	0.0	0.0	chr14	50666604	50666654	(56377064)	+	L1PA7	LINE/L1	6093	6143	(11)	1170317
231	28.9	18.1	0.6	chr14	50666917	50667076	(56376642)	+	MIRb	SINE/MIR	71	264	(4)	1170318
135	1.6	0.8	0.0	chr14	77269669	77269795	(29773923)	+	(TC)n	Simple_repeat	1	128	(0)	1213918
25	0.0	0.0	0.0	chr14	77269796	77269822	(29773896)	+	(C)n	Simple_repeat	1	27	(0)	1213919
529	28.8	2.5	2.5	chr14	77269823	77269979	(29773739)	C	MIR	SINE/MIR	(43)	219	63	1213920
10413	20.4	5.0	2.8	chr14	104533978	104534634	(2509084)	C	L1MC3	LINE/L1	(1877)	5908	5259	1258524
1790	20.6	3.9	0.5	chr14	104534640	104535038	(2508680)	+	MER89	LTR/ERV1	1	413	(146)	1258528
240	24.9	4.8	2.3	chr14	105694938	105695853	(1347865)	+	(AGAGAC)n	Simple_repeat	1	960	(0)	1259949
2251	6.7	4.8	1.1	chr15	20340242	20344102	(81647087)	+	(AGCCAGCCA)n	Simple_repeat	1	4048	(0)	1263201
449	34.5	13.0	1.8	chr15	57424010	57424518	(44566671)	+	L2a	LINE/L2	2838	3414	(12)	1318686
1066	27.7	9.7	5.2	chr15	57424530	57425032	(44566157)	+	Charlie29a	DNA/hAT-Charlie	101	628	(91)	1318688
224	14.5	4.8	5.8	chr15	70558586	70559230	(31431959)	+	(CA)n	Simple_repeat	1	676	(0)	1342368
3350	20.8	6.7	2.5	chr15	70908206	70908990	(31082199)	C	LTR8B	LTR/ERV1	(0)	820	1	1342951
2085	20.1	3.0	5.4	chr15	73969189	73969729	(28021460)	C	MER89	LTR/ERV1	(31)	528	1	1348021
702	22.8	10.9	2.4	chr15	73969733	73970076	(28021113)	+	L2a	LINE/L2	2831	3228	(198)	1348012
185	35.2	3.3	3.3	chr15	77699788	77699878	(24291311)	+	L2c	LINE/L2	3293	3383	(4)	1354494
2722	18.8	5.0	1.7	chr15	98307633	98308169	(3683020)	C	MER89	LTR/ERV1	(1)	558	3	1388412
189	26.4	4.0	1.4	chr15	98308346	98308418	(3682771)	C	MIR1_Amn	SINE/MIR	(134)	96	22	1388413
64	12.6	0.8	3.2	chr16	5500073	5500194	(84838151)	+	(CCTC)n	Simple_repeat	1	123	(0)	1403414
35	11.0	0.0	0.0	chr16	5500196	5500255	(84838090)	+	(CATTC)n	Simple_repeat	1	60	(0)	1403415
1598	17.6	0.8	0.4	chr16	5500260	5500521	(84837824)	C	AluJr	SINE/Alu	(49)	263	1	1403416
218	28.0	12.7	0.0	chr16	25759958	25760081	(64578264)	C	MIRc	SINE/MIR	(85)	183	24	1447651
56	1.9	0.0	0.0	chr16	25760102	25760156	(64578189)	+	(CCCTAA)n	Simple_repeat	1	55	(0)	1447654
1878	15.6	1.1	6.7	chr16	25760191	25760423	(64577922)	C	MLT1B	LTR/ERVL-MaLR	(40)	350	123	1447655
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
377	20.6	0.0	0.0	chr16	34063794	34063861	(56274484)	+	AluYj4	SINE/Alu	224	291	(20)	1463563
330	24.4	1.2	2.4	chr16	34071698	34071779	(56266566)	+	AluJb	SINE/Alu	208	288	(24)	1463578
338	14.9	0.0	0.0	chr16	34085515	34085561	(56252784)	C	AluYj4	SINE/Alu	(39)	272	226	1463590
49	10.2	1.2	0.0	chr16	34085562	34085645	(56252700)	+	(CCATT)n	Simple_repeat	1	85	(0)	1463591
376	15.6	3.0	0.0	chr16	34097527	34097590	(56240755)	C	AluJo	SINE/Alu	(22)	290	225	1463604
1143	16.0	0.4	0.2	chr16	34099855	34108438	(56229907)	C	ALR/Alpha	Satellite/centr	(57)	8603	1	1463611
26	2.1	7.5	3.5	chr16	34699521	34699573	(55638772)	+	(TGATGATTCCAT)n	Simple_repeat	1	57	(0)	1464055
2109	23.6	2.8	3.4	chr16	54031262	54031871	(36306474)	C	LTR8B	LTR/ERV1	(7)	813	208	1478819
35	3.6	11.4	3.6	chr16	85589746	85589868	(4748477)	+	(TGAACTATGTG)n	Simple_repeat	1	137	(0)	1535106
2361	6.2	0.7	0.0	chr17	4724446	4724749	(78532692)	+	AluYf1	SINE/Alu	1	306	(5)	1553615
2088	9.9	0.0	0.7	chr17	4724996	4725289	(78532152)	C	AluSx1	SINE/Alu	(20)	292	1	1553616
623	18.1	6.6	8.8	chr17	6987315	6987434	(76270007)	C	MER106A	DNA/hAT-Charlie	(47)	189	68	1558040
659	14.9	0.0	0.0	chr17	6987465	6987558	(76269883)	+	5S	rRNA	1	94	(27)	1558042
298	34.2	4.2	0.9	chr17	14673271	14673385	(68584056)	C	MIR3	SINE/MIR	(14)	194	76	1571851
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
14076	21.5	0.2	0.1	chr17	26878921	26879385	(56378056)	+	(TGGAA)n	Simple_repeat	4	470	(0)	1585978
354	19.1	1.6	0.0	chr17	26879386	26879448	(56377993)	+	AluYj4	SINE/Alu	224	287	(24)	1585979
14076	21.5	0.2	0.1	chr17	26879448	26880125	(56377316)	+	(TGGAA)n	Simple_repeat	1	678	(0)	1585980
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
1545	18.6	0.5	0.9	chr17	26937237	26937936	(56319505)	+	(GAATG)n	Satellite	5	705	(0)	1585990
395	19.4	1.6	0.0	chr17	26937941	26938002	(56319439)	+	AluSc	SINE/Alu	223	285	(24)	1585991
1545	18.6	0.5	0.9	chr17	26938006	26938444	(56318997)	+	(GAATG)n	Satellite	3	440	(0)	1585992
305	25.1	2.8	0.0	chr17	26938445	26938538	(56318903)	+	AluJb	SINE/Alu	192	292	(10)	1585993
1545	18.6	0.5	0.9	chr17	26938538	26939277	(56318164)	+	(GAATG)n	Satellite	3	736	(0)	1585994
437	12.7	3.1	0.0	chr17	26939289	26939351	(56318090)	+	AluSz6	SINE/Alu	225	289	(23)	1585995
1545	18.6	0.5	0.9	chr17	26939351	26939821	(56317620)	+	(GAATG)n	Satellite	4	474	(0)	1585996
301	22.2	3.1	0.0	chr17	26940399	26940461	(56316980)	+	AluYj4	SINE/Alu	224	288	(23)	1585999
1545	18.6	0.5	0.9	chr17	26940461	26941027	(56316414)	+	(GAATG)n	Satellite	4	569	(0)	1586000
993	4.0	0.0	0.0	chr17	32822870	32822994	(50434447)	+	L1PA5	LINE/L1	6030	6154	(0)	1597471
1417	18.6	2.8	2.8	chr17	41662325	41662515	(41594926)	+	MER2	DNA/TcMar-Tigger	159	345	(0)	1613980
301	21.1	8.8	11.9	chr17	43232365	43232482	(40024959)	+	MER96B	DNA/hAT-Tip100	1	114	(303)	1617360
2018	19.7	0.5	1.4	chr17	43232486	43232908	(40024533)	+	LTR13	LTR/ERVK	1	419	(588)	1617361
256	37.0	3.2	0.0	chr17	50500863	50500954	(32756487)	+	MIRc	SINE/MIR	9	103	(165)	1631922
413	12.3	2.4	0.0	chr17	50500957	50501037	(32756404)	+	MER53	DNA/hAT	1	83	(110)	1631923
234	16.7	4.9	0.0	chr17	50500981	50501058	(32756383)	C	MER53	DNA/hAT	(14)	179	98	1631924
235	10.8	0.0	0.0	chr17	50721150	50721186	(32536255)	C	LTR10D	LTR/ERV1	(0)	513	477	1632316
15	14.8	2.4	4.8	chr17	68512499	68512539	(14744902)	+	(CGC)n	Simple_repeat	1	42	(0)	1664337
1528	21.1	4.1	6.0	chr17	73145412	73145709	(10111732)	C	MLT1C	LTR/ERVL-MaLR	(56)	411	109	1671736
2420	20.1	9.3	2.1	chr17	73145710	73146227	(10111214)	+	MER89	LTR/ERV1	1	559	(0)	1671737
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
299	7.1	0.0	0.0	chr17	82366826	82366867	(890574)	C	Alu	SINE/Alu	(91)	42	1	1687531
1221	27.2	11.8	3.4	chr17	82366895	82367746	(889695)	C	L1MEg	LINE/L1	(4367)	2670	1738	1687532
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
200	2.8	7.2	2.7	chr18	4510685	4511029	(75862256)	+	(GTG)n	Simple_repeat	1	370	(0)	1696090
14683	11.9	1.2	3.0	chr18	8908670	8910234	(71463051)	+	MER41-int	LTR/ERV1	4405	5946	(0)	1702077
3039	18.1	3.1	2.6	chr18	8910235	8910778	(71462507)	+	MER41B	LTR/ERV1	1	547	(87)	1702077
380	27.4	5.2	4.3	chr18	10356657	10356866	(70016419)	+	MER89	LTR/ERV1	1	212	(347)	1704453
240	31.3	2.6	3.3	chr18	10356958	10357109	(70016176)	+	MER89	LTR/ERV1	69	219	(340)	1704454
266	26.5	6.9	7.1	chr18	10357085	10357298	(70015987)	+	MER89	LTR/ERV1	59	239	(320)	1704454
2367	12.7	9.0	1.5	chr18	10357334	10357724	(70015561)	+	MSTA	LTR/ERVL-MaLR	1	423	(5)	1704455
4819	15.0	2.6	1.4	chr18	31777831	31778640	(48594645)	+	LTR8B	LTR/ERV1	1	820	(0)	1728188
1067	28.6	3.9	2.9	chr18	34068975	34069659	(46303626)	+	L1M4a1	LINE/L1	678	1672	(907)	1731472
2384	19.7	1.6	3.7	chr18	34069679	34070029	(46303256)	+	MER89	LTR/ERV1	59	411	(148)	1731473
2502	5.5	0.0	0.0	chr18	34070030	34070318	(46302967)	C	AluYc	SINE/Alu	(10)	289	1	1731474
495	18.3	1.0	4.6	chr18	42839724	42839741	(37533544)	C	MER53	DNA/hAT	(84)	109	93	1743379
2448	21.2	3.9	0.7	chr18	42839742	42840282	(37533003)	+	MER89	LTR/ERV1	1	559	(0)	1743380
205	18.6	0.3	0.0	chr18	46546273	46546655	(33826630)	+	(CATTC)n	Satellite	1	384	(0)	1748842
28122	17.0	7.8	7.8	chr18	52790112	52792754	(27580531)	C	HUERS-P3b-int	LTR/ERV1	(7)	2901	90	1758952
78	6.2	1.0	0.9	chr18	52792755	52792858	(27580427)	+	(ATTCC)n	Simple_repeat	1	105	(0)	1758954
28122	17.0	7.8	7.8	chr18	52792859	52792933	(27580352)	C	HUERS-P3b-int	LTR/ERV1	(7329)	89	25	1758952
13	30.2	2.8	2.7	chr18	63367241	63367312	(17005973)	+	G-rich	Low_complexity	1	74	(0)	1774949
27	0.0	0.0	0.0	chr18	63367331	63367356	(17005929)	+	(CCGCCA)n	Simple_repeat	1	26	(0)	1774950
2473	8.6	0.0	0.0	chr18	70527311	70527611	(9845674)	+	AluY	SINE/Alu	1	301	(10)	1784748
2491	17.3	7.2	2.8	chr18	70527612	70527849	(9845436)	C	MER89	LTR/ERV1	(301)	258	1	1784747
1721	17.5	2.4	1.1	chr18	70527900	70528185	(9845100)	+	AluJo	SINE/Alu	7	296	(16)	1784749
1714	26.6	9.7	9.3	chr18	74617198	74618378	(5754907)	C	L1MC4	LINE/L1	(138)	7904	6719	1790144
2254	19.8	10.4	2.1	chr19	34962231	34962742	(23654874)	C	MER89	LTR/ERV1	(0)	559	1	1859398
12739	0.5	0.0	2.1	chr19	36270447	36272042	(22345574)	+	SST1	Satellite/centr	1	1563	(0)	1862253
24	29.7	0.0	2.5	chr19	36272043	36272123	(22345493)	+	(GT)n	Simple_repeat	1	81	(0)	1862254
26	23.7	3.8	3.6	chr19	36272113	36272129	(22345487)	+	(CTGTCT)n	Simple_repeat	1	66	(44)	1862255
36	20.5	1.2	1.2	chr19	36272130	36272209	(22345407)	+	(TC)n	Simple_repeat	1	81	(0)	1862256
26	23.7	3.8	3.6	chr19	36272210	36272218	(22345398)	+	(CTGTCT)n	Simple_repeat	67	110	(0)	1862255
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
217	36.2	8.9	6.3	chr2	42858920	42859093	(199334436)	C	MER5A	DNA/hAT-Charlie	(6)	183	5	1976448
3105	16.9	1.1	1.1	chr2	49488867	49489412	(192704117)	+	MER89	LTR/ERV1	5	550	(9)	1987505
501	25.9	13.1	3.6	chr2	70118502	70118749	(172074780)	+	L1M5	LINE/L1	5488	5762	(362)	2018424
14	11.6	0.0	3.3	chr2	70118772	70118801	(172074728)	+	(AATT)n	Simple_repeat	1	30	(0)	2018426
244	24.6	4.2	0.0	chr2	70118965	70119033	(172074496)	+	LTR88a	LTR/Gypsy?	244	315	(501)	2018427
1895	24.2	4.9	3.5	chr2	70119051	70119488	(172074041)	C	L2a	LINE/L2	(148)	3278	2821	2018428
932	21.8	0.0	0.0	chr2	73376653	73376799	(168816730)	+	AluJr	SINE/Alu	136	282	(30)	2023622
2781	17.3	2.5	1.2	chr2	73376809	73377316	(168816213)	+	MER89	LTR/ERV1	45	559	(0)	2023621
605	29.6	8.6	3.5	chr2	74508917	74509033	(167684496)	+	L2c	LINE/L2	2677	2813	(606)	2025507
704	20.1	2.1	1.1	chr2	74509034	74509219	(167684310)	+	L1MA10	LINE/L1	6147	6334	(0)	2025508
237	32.7	4.3	1.8	chr2	79902235	79902346	(162291183)	+	MIR	SINE/MIR	1	115	(147)	2032933
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
2829	16.3	6.5	0.6	chr2	96648292	96648803	(145544726)	C	MER89	LTR/ERV1	(2)	557	13	2052511
390	22.6	1.1	2.1	chr2	96648804	96648898	(145544631)	+	MER47C	DNA/TcMar-Tigger	1	94	(3)	2052512
2829	16.3	6.5	0.6	chr2	96648899	96648909	(145544620)	C	MER89	LTR/ERV1	(547)	12	2	2052511
2772	18.8	2.9	1.1	chr2	100844898	100845446	(141348083)	C	MER89	LTR/ERV1	(0)	559	1	2058614
1982	21.3	7.5	3.0	chr2	103141771	103142303	(139051226)	+	MER89	LTR/ERV1	1	559	(0)	2061955
2364	20.6	4.0	2.8	chr2	105668602	105669087	(136524442)	C	MER89	LTR/ERV1	(9)	550	57	2065308
38	0.0	0.0	0.0	chr2	105669088	105669120	(136524409)	+	(TA)n	Simple_repeat	1	33	(0)	2065309
2487	8.1	0.0	0.0	chr2	105669121	105669429	(136524100)	C	AluY	SINE/Alu	(2)	309	1	2065310
1305	19.1	11.2	0.0	chr2	106051327	106051588	(136141941)	C	AluJr	SINE/Alu	(17)	295	1	2065848
1617	19.7	10.6	3.7	chr2	106523611	106524038	(135669491)	C	LOR1b	LTR/ERV1	(0)	461	1	2066615
2569	19.4	3.6	2.0	chr2	106524039	106524297	(135669232)	C	MER89	LTR/ERV1	(287)	272	3	2066614
3361	20.3	12.7	6.4	chr2	108534908	108536013	(133657516)	C	Charlie1a	DNA/hAT-Charlie	(0)	1455	271	2069394
12	15.3	3.5	0.0	chr2	120735780	120735808	(121457721)	+	(GGCG)n	Simple_repeat	1	30	(0)	2087492
13	13.1	0.0	0.0	chr2	120735967	120735991	(121457538)	+	(GGC)n	Simple_repeat	1	25	(0)	2087493
576	26.8	15.9	4.7	chr2	121689311	121689406	(120504123)	+	L2a	LINE/L2	3318	3425	(1)	2089121
389	32.9	10.3	7.9	chr2	121689534	121689903	(120503626)	C	L2c	LINE/L2	(0)	3387	3001	2089123
21	43.3	0.0	1.6	chr2	134984287	134984409	(107209120)	+	(AC)n	Simple_repeat	1	123	(0)	2108231
19	24.2	0.0	3.4	chr2	134984357	134984415	(107209114)	+	(ATAT)n	Simple_repeat	1	59	(0)	2108232
917	16.7	3.1	3.6	chr2	134984417	134984609	(107208920)	+	MER89	LTR/ERV1	1	192	(367)	2108233
2427	9.3	0.0	0.3	chr2	134984671	134984960	(107208569)	+	AluSg4	SINE/Alu	1	289	(21)	2108234
2553	19.3	10.4	0.6	chr2	136495696	136496195	(105697334)	C	MER89	LTR/ERV1	(4)	555	1	2110783
331	31.3	9.3	6.5	chr2	136496196	136496370	(105697159)	+	L2a	LINE/L2	3236	3420	(6)	2110781
3111	10.5	0.0	0.7	chr2	152863541	152863990	(89329539)	C	L1PA13	LINE/L1	(11)	6152	5706	2133076
712	19.3	7.7	3.0	chr2	152863991	152864188	(89329341)	C	MER89	LTR/ERV1	(351)	208	1	2133073
29	11.5	2.1	0.0	chr2	152864275	152864321	(89329208)	+	(CA)n	Simple_repeat	1	48	(0)	2133077
826	27.7	13.5	6.9	chr2	153595912	153596436	(88597093)	C	MLT1G1	LTR/ERVL-MaLR	(40)	515	2	2133907
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
438	32.3	5.2	1.7	chr2	168444453	168444691	(73748838)	C	MIR	SINE/MIR	(14)	248	1	2153560
706	31.1	5.5	3.7	chr2	168444763	168445086	(73748443)	+	MLT1I	LTR/ERVL-MaLR	74	403	(8)	2153561
1579	12.8	2.2	0.0	chr2	171653109	171653326	(70540203)	+	AluSx	SINE/Alu	23	245	(67)	2158814
487	23.5	1.7	0.9	chr2	171653450	171653565	(70539964)	+	MLT1L	LTR/ERVL-MaLR	493	609	(1)	2158815
231	14.7	0.0	0.0	chr2	171653571	171653604	(70539925)	C	MLT1O	LTR/ERVL-MaLR	(361)	181	148	2158816
1079	33.3	12.6	2.3	chr2	189641020	189641985	(52551544)	C	L2b	LINE/L2	(9)	3366	2286	2183137
2535	18.0	7.7	2.5	chr2	191190934	191191462	(51002067)	C	MER89	LTR/ERV1	(0)	559	1	2185486
501	19.7	0.0	9.6	chr2	191191463	191191483	(51002046)	C	MIRb	SINE/MIR	(152)	116	99	2185485
2735	17.5	2.9	2.5	chr2	194764474	194765030	(47428499)	C	MER89	LTR/ERV1	(0)	559	1	2190080
3284	20.3	6.3	1.7	chr2	196498444	196499218	(45694311)	+	LTR8B	LTR/ERV1	1	813	(7)	2192486
2469	17.1	8.5	3.6	chr2	211416448	211416974	(30776555)	+	MER89	LTR/ERV1	5	559	(0)	2215571
477	13.9	0.0	0.0	chr2	221718885	221718963	(20474566)	+	L1PA5	LINE/L1	6076	6154	(0)	2231512
2351	21.4	6.6	0.2	chr2	221719009	221719531	(20473998)	+	MER89	LTR/ERV1	1	559	(0)	2231513
2778	15.0	9.0	0.2	chr2	230134199	230134707	(12058822)	C	MER89	LTR/ERV1	(0)	559	2	2244785
247	29.8	3.7	7.1	chr2	230134708	230134720	(12058809)	+	MamSINE1	SINE/tRNA-RTE	278	288	(2)	2244784
477	32.6	12.6	3.5	chr2	230854297	230854699	(11338830)	C	L1MD	LINE/L1	(2589)	3557	3113	2245802
363	20.9	3.2	0.0	chr2	231832547	231832635	(10360894)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247713
331	23.9	2.1	0.0	chr2	231832636	231832725	(10360804)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247713
360	23.2	2.0	2.0	chr2	231832753	231832853	(10360676)	+	MER20	DNA/hAT-Charlie	119	219	(0)	2247713
226	23.3	0.8	0.8	chr2	235078843	235079364	(7114165)	+	(GT)n	Simple_repeat	1	526	(0)	2252996
1645	23.8	7.6	1.7	chr2	238940262	238940731	(3252798)	+	MER89	LTR/ERV1	60	559	(0)	2258409
1966	23.1	0.2	0.1	chr20	63841	67292	(64376875)	+	(ATTCC)n	Simple_repeat	2	3456	(0)	2262202
18	21.8	0.0	0.0	chr20	25867686	25867722	(38576445)	+	(AC)n	Simple_repeat	1	37	(0)	2302876
21	30.9	1.4	0.0	chr20	25867722	25867792	(38576375)	+	GA-rich	Low_complexity	1	72	(0)	2302877
2308	29.1	5.8	6.1	chr20	25867794	25869361	(38574806)	C	SST1	Satellite/centr	(1)	1562	1	2302878
5631	14.8	3.0	7.2	chr20	29880107	29881265	(34562902)	+	Tigger1	DNA/TcMar-Tigger	1310	2418	(0)	2304624
386	18.8	0.0	0.0	chr20	29881277	29881340	(34562827)	+	Tigger1	DNA/TcMar-Tigger	2355	2418	(0)	2304625
339	19.1	1.6	0.0	chr20	29881352	29881414	(34562753)	+	Tigger1	DNA/TcMar-Tigger	2355	2418	(0)	2304625
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
2435	9.3	0.0	1.0	chr20	31312987	31313299	(33130868)	+	AluSz	SINE/Alu	2	311	(1)	2305721
1659	17.3	6.8	8.0	chr20	33737128	33737294	(30706873)	C	LTR8A	LTR/ERV1	(0)	727	581	2311469
2169	9.8	0.0	0.7	chr20	33737295	33737307	(30706860)	C	AluY	SINE/Alu	(18)	293	282	2311470
29	0.0	0.0	3.1	chr20	33737308	33737339	(30706828)	+	(TTTATTT)n	Simple_repeat	1	32	(0)	2311471
2169	9.8	0.0	0.7	chr20	33737340	33737620	(30706547)	C	AluY	SINE/Alu	(30)	281	1	2311470
2539	14.8	7.7	3.1	chr20	45850255	45850562	(18593605)	C	MER89	LTR/ERV1	(222)	337	2	2336372
712	29.1	17.5	3.4	chr20	51299273	51299567	(13144600)	C	L2a	LINE/L2	(0)	3426	3064	2348848
934	21.7	0.9	13.7	chr20	51299568	51299681	(13144486)	+	MER58A	DNA/hAT-Charlie	1	95	(129)	2348849
27	0.0	0.0	0.0	chr20	51299682	51299707	(13144460)	+	(T)n	Simple_repeat	1	26	(0)	2348850
446	28.3	0.6	1.7	chr20	52004676	52004851	(12439316)	C	MER104	DNA/TcMar-Tc2	(3)	178	5	2350506
1362	25.8	14.2	3.8	chr20	54479626	54480148	(9964019)	+	L2a	LINE/L2	2262	2842	(577)	2355765
283	24.0	4.5	10.4	chr20	56358503	56358646	(8085521)	C	ORSL-2a	DNA/hAT-Tip100	(180)	162	28	2358871
12	13.2	5.7	2.7	chr20	56358737	56358771	(8085396)	+	G-rich	Low_complexity	1	37	(0)	2358874
18	9.8	4.1	5.9	chr20	56359085	56359133	(8085034)	+	(GCGCCCT)n	Simple_repeat	1	51	(0)	2358875
17	24.8	1.9	0.0	chr20	61865067	61865119	(2579048)	+	(TGCCCC)n	Simple_repeat	1	54	(0)	2367836
327	31.9	5.5	1.0	chr20	61865789	61865997	(2578170)	C	MER89	LTR/ERV1	(340)	219	1	2367837
1142	23.0	0.4	0.2	chr21	5327288	5328868	(41381115)	+	(TGGAA)n	Simple_repeat	1	1581	(0)	2371008
1142	23.0	0.4	0.2	chr21	5328933	5329957	(41380026)	+	(TGGAA)n	Simple_repeat	2	1031	(0)	2371010
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
2828	18.2	1.6	1.8	chr21	7942700	7957766	(38752217)	+	(CATTC)n	Satellite	1	15309	(0)	2373121
40632	0.2	1.2	0.8	chr21	8214773	8218941	(38491042)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373279
797	22.4	0.5	0.1	chr21	8229975	8230765	(38479218)	+	(TCTC)n	Simple_repeat	2	795	(0)	2373327
446	20.9	0.1	6.5	chr21	8230776	8230919	(38479064)	+	MER39B	LTR/ERV1	298	454	(253)	2373328
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
24	15.5	7.0	0.0	chr21	8401981	8402037	(38307946)	+	(CG)n	Simple_repeat	1	61	(0)	2373511
14	13.3	9.8	0.0	chr21	8402028	8402068	(38307915)	+	(CGTC)n	Simple_repeat	1	45	(0)	2373512
312	38.2	6.5	3.6	chr21	8419786	8420171	(38289812)	C	HAL1	LINE/L1	(1230)	1277	880	2373573
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
25399	0.2	1.5	0.8	chr21	8441146	8441992	(38267991)	+	LSU-rRNA_Hsa	rRNA	1	877	(4158)	2373624
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
785	22.6	0.5	0.1	chr21	8455261	8456884	(38253099)	+	(TCTC)n	Simple_repeat	1	1629	(0)	2373669
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
342	35.4	4.7	0.0	chr21	9126682	9126862	(37583121)	+	L4_B_Mam	LINE/RTE-X	4232	4421	(520)	2374264
3424	19.3	3.5	9.5	chr21	9143369	9144153	(37565830)	C	LTR49-int	LTR/ERV1	(1013)	5318	4572	2374278
1738	18.7	0.7	1.0	chr21	9144154	9144447	(37565536)	C	AluJb	SINE/Alu	(18)	294	2	2374279
3424	21.2	4.9	9.9	chr21	9144448	9144867	(37565116)	C	LTR49-int	LTR/ERV1	(1760)	4571	4283	2374278
334	30.3	5.3	0.0	chr21	9246374	9246462	(37463521)	+	AluYa8	SINE/Alu	185	278	(32)	2374337
436	12.7	0.0	0.0	chr21	9246781	9246835	(37463148)	+	AluYj4	SINE/Alu	225	279	(32)	2374338
404	15.6	1.5	0.0	chr21	9247151	9247214	(37462769)	+	AluYj4	SINE/Alu	224	288	(23)	2374339
74	12.3	0.0	0.0	chr21	9247783	9247915	(37462068)	+	(TGGAA)n	Simple_repeat	1	133	(0)	2374340
378	16.1	3.0	0.2	chr21	9247917	9247990	(37461993)	+	AluJb	SINE/Alu	216	290	(12)	2374341
1263	30.4	12.1	1.4	chr21	9257066	9257711	(37452272)	C	L2	LINE/L2	(1779)	1640	916	2374355
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
21	16.7	0.0	2.4	chr21	9819273	9819314	(36890669)	+	(AC)n	Simple_repeat	1	42	(0)	2374898
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
398	8.6	0.2	0.0	chr21	10426491	10427038	(36282945)	+	(GTGGTG)n	Simple_repeat	1	549	(0)	2375540
404	28.3	11.0	2.7	chr21	10427070	10427382	(36282601)	C	L2c	LINE/L2	(213)	3174	2827	2375541
25	15.4	0.0	0.0	chr21	10427515	10427557	(36282426)	+	(CA)n	Simple_repeat	1	43	(0)	2375542
740	15.8	3.8	0.0	chr21	32271616	32271742	(14438241)	C	AluJr4	SINE/Alu	(180)	132	1	2402929
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
1165	16.9	0.3	0.2	chr22	12409598	12416141	(38402327)	+	ALR/Alpha	Satellite/centr	1	6556	(0)	2425921
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
4341	4.4	0.2	0.0	chr22	18890645	18891207	(31927261)	C	HSATI	Satellite	(10)	567	4	2431162
36	2.7	13.3	0.0	chr22	18891210	18891284	(31927184)	+	(AT)n	Simple_repeat	1	85	(0)	2431163
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
405	13.0	7.8	3.1	chr22	49972792	49973865	(844603)	+	(GT)n	Simple_repeat	1	1123	(0)	2490010
333	35.9	5.8	3.7	chr3	29742283	29742744	(168552815)	+	L2c	LINE/L2	2755	3330	(57)	2539601
1260	25.2	11.4	6.8	chr3	35188447	35188820	(163106739)	C	MER89	LTR/ERV1	(0)	559	193	2548398
30	0.0	0.0	0.0	chr3	35188821	35188849	(163106710)	+	(TTTTG)n	Simple_repeat	1	29	(0)	2548399
1260	25.2	11.4	6.8	chr3	35188850	35189005	(163106554)	C	MER89	LTR/ERV1	(367)	192	1	2548398
180	34.9	12.9	1.9	chr3	35539092	35539304	(162756255)	+	L2	LINE/L2	1959	2198	(1221)	2548836
694	23.2	9.9	0.0	chr3	38083956	38084136	(160211423)	C	L1MC5	LINE/L1	(28)	9276	9076	2552503
193	18.3	0.3	0.0	chr3	38084271	38084619	(160210940)	+	(TAG)n	Simple_repeat	1	350	(0)	2552504
2610	17.0	3.5	6.6	chr3	39473208	39473767	(158821792)	C	MER74A	LTR/ERVL	(1)	557	16	2554600
488	19.4	2.8	0.0	chr3	42903853	42903955	(155391604)	+	MER89	LTR/ERV1	2	107	(452)	2559855
153	16.7	3.3	2.0	chr3	42904068	42904403	(155391156)	+	(CTTC)n	Simple_repeat	1	347	(0)	2559861
2795	16.2	8.4	0.8	chr3	47194063	47194577	(151100982)	C	MER89	LTR/ERV1	(0)	559	2	2566627
599	18.5	8.5	0.0	chr3	47194619	47194726	(151100833)	C	AluJr	SINE/Alu	(194)	118	1	2566628
779	19.4	6.2	6.3	chr3	49448995	49449070	(148846489)	C	MER33	DNA/hAT-Charlie	(97)	112	4	2571393
288	29.8	3.5	0.0	chr3	49449094	49449177	(148846382)	+	L2b	LINE/L2	3287	3373	(2)	2571396
50	18.2	0.0	2.0	chr3	49449558	49449659	(148845900)	+	(TTCC)n	Simple_repeat	1	102	(0)	2571397
211	37.8	0.0	2.0	chr3	50041953	50042052	(148253507)	+	MIR3	SINE/MIR	42	139	(69)	2572520
241	17.2	1.5	3.0	chr3	50042047	50042112	(148253447)	+	MIRc	SINE/MIR	185	249	(19)	2572521
1630	10.0	13.5	1.5	chr3	50272727	50272853	(148022706)	+	AluSx1	SINE/Alu	137	300	(12)	2572846
28	0.0	0.0	0.0	chr3	50272856	50272881	(148022678)	+	(AAT)n	Simple_repeat	1	26	(0)	2572848
3076	17.5	0.7	0.9	chr3	53976357	53976916	(144318643)	C	MER89	LTR/ERV1	(0)	559	1	2578335
1196	25.1	7.7	7.3	chr3	71933696	71934160	(126361399)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	2608104
2202	17.7	11.7	0.4	chr3	71934148	71934624	(126360935)	+	MER89	LTR/ERV1	4	541	(18)	2608105
15	11.6	3.3	3.2	chr3	79288488	79288517	(119007042)	+	(GT)n	Simple_repeat	1	31	(0)	2619272
2883	13.5	0.9	0.0	chr3	99329302	99329753	(98965806)	+	L1PA15	LINE/L1	5710	6165	(0)	2640106
1502	17.9	3.0	1.0	chr3	99329751	99330049	(98965510)	+	L1MB2	LINE/L1	5860	6164	(7)	2640107
2349	10.7	0.0	0.0	chr3	105908622	105908929	(92386630)	C	AluSg	SINE/Alu	(0)	310	3	2648855
2740	16.1	2.4	1.5	chr3	135866783	135867312	(62428247)	C	MER89	LTR/ERV1	(24)	535	1	2693453
394	38.0	6.6	6.6	chr3	135867324	135867551	(62428008)	+	L2c	LINE/L2	3127	3354	(21)	2693451
337	36.9	4.8	7.2	chr3	136851724	136852170	(61443389)	C	L2	LINE/L2	(553)	2866	2431	2695228
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
2549	16.3	5.2	2.4	chr3	155424628	155425024	(42870535)	+	MER89	LTR/ERV1	1	413	(146)	2722485
589	17.3	0.0	2.8	chr3	173352052	173352158	(24943401)	C	MER54B	LTR/ERVL	(577)	216	113	2747450
1057	25.3	15.7	1.7	chr3	185807582	185807995	(12487564)	+	MLT1F	LTR/ERVL-MaLR	16	498	(50)	2767127
785	19.3	0.0	2.2	chr3	185807999	185808133	(12487426)	+	FLAM_A	SINE/Alu	1	132	(10)	2767128
259	21.8	0.0	0.0	chr4	3911000	3911054	(186303501)	C	MER4-int	LTR/ERV1	(5434)	1164	1110	2793794
333	27.5	17.2	0.5	chr4	5257453	5257646	(184956909)	+	L2	LINE/L2	2641	2873	(546)	2796288
1633	20.6	9.0	3.4	chr4	7924641	7925164	(182289391)	+	MER89	LTR/ERV1	1	556	(3)	2800917
260	35.8	3.8	1.9	chr4	14072102	14072255	(176142300)	+	MIRb	SINE/MIR	51	207	(61)	2810368
399	23.3	7.3	6.0	chr4	14072257	14072471	(176142084)	+	MER89	LTR/ERV1	2	219	(340)	2810369
2197	21.6	1.6	2.1	chr4	14072856	14073367	(176141188)	+	MER89	LTR/ERV1	51	559	(0)	2810370
2647	4.2	0.0	0.7	chr4	17472788	17473093	(172741462)	+	AluY	SINE/Alu	1	304	(7)	2816266
2468	9.8	0.3	0.0	chr4	38712546	38712841	(151501714)	+	AluSx1	SINE/Alu	1	297	(15)	2848264
2799	17.9	2.7	3.5	chr4	38712842	38713091	(151501464)	C	MER89	LTR/ERV1	(299)	260	13	2848263
887	30.1	6.3	1.6	chr4	38713101	38713673	(151500882)	C	L1ME1	LINE/L1	(2510)	3636	3035	2848255
863	17.6	1.2	0.2	chr4	49090455	49091234	(141123321)	+	ALR/Alpha	Satellite/centr	1	788	(0)	2864886
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
14	13.7	0.0	5.6	chr4	49289254	49289289	(140925266)	+	(TTTTGC)n	Simple_repeat	1	36	(0)	2865068
1804	12.9	6.2	0.0	chr4	49289292	49289578	(140924977)	C	L1PA10	LINE/L1	(0)	6168	5863	2865069
290	27.5	0.0	0.0	chr4	49313048	49313116	(140901439)	C	MER47C	DNA/TcMar-Tigger	(28)	69	1	2865111
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
765	23.2	4.1	11.8	chr4	49510094	49510415	(140704140)	C	L1MB8	LINE/L1	(43)	6135	5840	2865174
69	6.2	0.0	0.0	chr4	49510486	49510569	(140703986)	+	(TCCT)n	Simple_repeat	1	84	(0)	2865175
304	22.8	0.0	0.0	chr4	49510858	49510914	(140703641)	C	MER47C	DNA/TcMar-Tigger	(28)	69	13	2865176
2045	18.7	5.3	10.5	chr4	52410311	52410543	(137804012)	C	MER89	LTR/ERV1	(232)	327	74	2866149
597	25.6	5.4	4.5	chr4	52410646	52410866	(137803689)	C	MER89	LTR/ERV1	(336)	223	1	2866151
196	18.2	2.2	4.3	chr4	56819267	56819312	(133395243)	C	L2c	LINE/L2	(231)	3156	3112	2873364
208	32.7	9.1	4.3	chr4	56819313	56819379	(133395176)	+	MIRb	SINE/MIR	111	188	(80)	2873366
2865	16.5	2.3	3.9	chr4	56819380	56819605	(133394950)	+	MER89	LTR/ERV1	1	233	(326)	2873367
2302	12.3	0.0	0.0	chr4	56819606	56819913	(133394642)	C	AluSc8	SINE/Alu	(2)	309	2	2873368
2633	16.2	2.7	6.7	chr4	60541730	60542311	(129672244)	+	MER89	LTR/ERV1	2	559	(0)	2878300
3846	11.2	2.6	0.0	chr4	92172860	92173424	(98041131)	C	LTR19B	LTR/ERV1	(0)	580	1	2921947
18	0.0	0.0	0.0	chr4	98201259	98201278	(92013277)	+	(CT)n	Simple_repeat	1	20	(0)	2929816
2823	16.7	3.6	3.5	chr4	98201281	98201827	(92012728)	+	MER89	LTR/ERV1	12	559	(0)	2929817
27	2.7	0.0	6.8	chr4	99311450	99311493	(90903062)	+	(TGAGATTAA)n	Simple_repeat	1	44	(0)	2931526
223	32.2	4.8	3.3	chr4	99311741	99311862	(90902693)	+	L2b	LINE/L2	3252	3375	(0)	2931527
522	34.4	14.9	1.5	chr4	108971264	108971884	(81242671)	C	L2b	LINE/L2	(0)	3375	2648	2944320
187	36.8	1.4	0.0	chr4	108971888	108971955	(81242600)	+	L2c	LINE/L2	3304	3372	(3)	2944316
126	6.4	1.0	3.1	chr4	124470395	124470587	(65743968)	+	(CTTC)n	Simple_repeat	1	195	(0)	2965315
21	28.7	4.8	3.9	chr4	124470588	124470612	(65743943)	+	(CTCT)n	Simple_repeat	1	25	(0)	2965316
613	32.7	4.5	6.2	chr4	134510707	134510816	(55703739)	C	Arthur1	DNA/hAT-Tip100	(3062)	885	775	2978191
1615	23.1	11.6	3.7	chr4	134510817	134511329	(55703226)	+	MER89	LTR/ERV1	1	559	(0)	2978192
1254	32.6	9.3	9.2	chr4	135417707	135418367	(54796188)	+	ERVL-E-int	LTR/ERVL	3381	4068	(1599)	2979258
318	17.8	0.0	0.0	chr4	135418368	135418412	(54796143)	+	AluSc8	SINE/Alu	135	179	(132)	2979259
1254	32.6	9.3	9.2	chr4	135418413	135418831	(54795724)	+	ERVL-E-int	LTR/ERVL	4069	4506	(1161)	2979258
341	24.4	0.6	9.7	chr4	170163025	170163130	(20051425)	C	MIRb	SINE/MIR	(2)	260	160	3027429
202	37.6	5.4	1.9	chr4	170163192	170163351	(20051204)	C	L2b	LINE/L2	(185)	3190	3025	3027430
508	19.0	0.3	0.4	chr4	178953265	178954225	(11260330)	+	(CACCAC)n	Simple_repeat	1	964	(0)	3038879
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
2125	0.2	0.0	0.3	chr5	10001	11835	(181526424)	+	(TAACCC)n	Simple_repeat	1	1835	(0)	3054965
332	22.9	6.7	3.0	chr5	1929062	1930478	(179607781)	+	(GTGTCGT)n	Simple_repeat	1	1512	(0)	3056791
616	18.1	7.6	3.3	chr5	3322298	3324431	(178213828)	+	(GT)n	Simple_repeat	1	2297	(0)	3058237
2692	15.0	5.6	0.8	chr5	15027891	15028420	(166509839)	+	MER89	LTR/ERV1	2	558	(1)	3073064
4645	17.7	6.0	1.2	chr5	23506304	23507244	(158031015)	+	L1P4a	LINE/L1	431	1419	(5084)	3084855
2014	23.4	3.2	3.5	chr5	36078749	36079756	(145458503)	C	L1PA17	LINE/L1	(4799)	2136	1227	3102260
7393	9.3	1.3	0.6	chr5	43470633	43472857	(138065402)	+	L1MA1	LINE/L1	5456	7477	(244)	3113142
13	23.2	3.9	1.9	chr5	69094190	69094241	(112444018)	+	(GCGGCA)n	Simple_repeat	1	54	(0)	3143234
901	23.9	9.2	3.4	chr5	69521162	69521486	(112016773)	C	L1ME3G	LINE/L1	(246)	678	333	3144235
933	14.7	1.9	2.5	chr5	69521488	69521644	(112016615)	+	AluJo	SINE/Alu	134	289	(23)	3144236
2981	17.6	1.6	3.2	chr5	74623820	74624382	(106913877)	C	MER89	LTR/ERV1	(0)	559	6	3152253
3040	17.9	2.3	1.3	chr5	79933207	79933759	(101604500)	+	MER89	LTR/ERV1	1	559	(0)	3160574
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
4338	12.6	1.4	2.4	chr5	106535765	106535989	(75002270)	C	L1PA13	LINE/L1	(508)	5655	5437	3195260
2538	18.1	4.3	1.2	chr5	118505075	118505589	(63032670)	+	MER89	LTR/ERV1	4	535	(24)	3210920
1399	16.5	3.3	2.2	chr5	126022543	126022809	(55515450)	C	MER89	LTR/ERV1	(14)	545	276	3220690
475	24.3	2.6	0.0	chr5	126022923	126023033	(55515226)	C	MER89	LTR/ERV1	(445)	114	1	3220690
1346	26.7	6.0	3.4	chr5	126023036	126023621	(55514638)	+	L1ME4b	LINE/L1	34	635	(257)	3220691
228	28.6	0.0	0.0	chr5	177501296	177501365	(4036894)	+	MIR3	SINE/MIR	33	102	(106)	3307537
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
1237	20.1	3.8	2.1	chr5	179549586	179549868	(1988391)	C	AluYa8	SINE/Alu	(22)	288	1	3311063
241	23.1	7.3	9.1	chr5	179549884	179550018	(1988241)	C	MIR3	SINE/MIR	(48)	160	33	3311064
180	17.9	2.5	0.0	chr5	181138670	181138708	(399551)	+	L2a	LINE/L2	3217	3256	(170)	3313716
286	26.1	3.3	9.3	chr5	181138722	181138818	(399441)	+	MIR	SINE/MIR	31	121	(141)	3313717
311	34.4	10.5	9.8	chr6	13688374	13688647	(157117332)	+	L2b	LINE/L2	3131	3406	(20)	3334692
18	19.2	2.0	2.0	chr6	13924572	13924620	(156881359)	+	(GGT)n	Simple_repeat	1	50	(0)	3335169
493	24.0	7.4	1.3	chr6	15303974	15304125	(155501854)	+	MIR	SINE/MIR	79	240	(22)	3337761
16	9.3	0.0	0.0	chr6	15304304	15304326	(155501653)	+	(C)n	Simple_repeat	1	23	(0)	3337762
1555	15.6	1.1	1.8	chr6	26188288	26188562	(144617417)	+	AluSz6	SINE/Alu	1	273	(39)	3354799
2540	18.8	6.8	1.4	chr6	27257261	27257771	(143548208)	C	MER89	LTR/ERV1	(18)	541	1	3356590
974	17.0	5.0	2.9	chr6	34070977	34073549	(136732430)	+	(CA)n	Simple_repeat	1	2702	(0)	3367583
430	12.7	0.0	0.0	chr6	65888071	65888141	(104917838)	C	MER89	LTR/ERV1	(7)	552	482	3413661
958	26.1	13.9	2.4	chr6	65888155	65888523	(104917456)	C	MER89	LTR/ERV1	(136)	423	6	3413661
31	0.0	0.0	0.0	chr6	73201265	73201293	(97604686)	+	(T)n	Simple_repeat	1	29	(0)	3422869
1886	9.4	0.0	13.1	chr6	73201298	73201457	(97604522)	C	AluSx	SINE/Alu	(54)	258	137	3422870
1816	15.1	0.0	5.0	chr6	89829017	89829188	(80976791)	+	AluJr	SINE/Alu	146	303	(9)	3445456
2896	18.9	1.4	3.0	chr6	98973252	98973819	(71832160)	C	MER89	LTR/ERV1	(0)	559	1	3456946
662	25.1	6.9	0.5	chr6	111057406	111057609	(59748370)	+	L1ME4b	LINE/L1	592	809	(83)	3474945
628	16.7	0.0	3.6	chr6	111057643	111057754	(59748225)	+	MER2B	DNA/TcMar-Tigger	229	336	(0)	3474946
865	30.6	4.6	4.8	chr6	119052289	119052700	(51753279)	+	L2	LINE/L2	2554	2964	(455)	3486042
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
451	23.4	2.3	12.1	chr6	121330612	121330801	(49475178)	+	MER5B	DNA/hAT-Charlie	8	178	(0)	3488806
309	33.4	0.4	1.7	chr6	127592718	127592851	(43213128)	+	MIRb	SINE/MIR	57	197	(71)	3497098
1416	16.3	5.9	0.6	chr6	127592874	127593152	(43212827)	C	MER61B	LTR/ERV1	(29)	398	22	3497099
555	16.7	1.9	1.9	chr6	127593137	127593240	(43212739)	C	MER61B	LTR/ERV1	(323)	104	1	3497099
273	12.2	0.0	0.0	chr6	127593249	127593289	(43212690)	C	MER61-int	LTR/ERV1	(22)	5195	5155	3497099
27325	2.6	0.2	0.0	chr6	127593293	127599292	(43206687)	+	L1PA2	LINE/L1	136	6145	(10)	3497100
60	0.0	0.0	0.0	chr6	131241578	131241628	(39564351)	+	(TG)n	Simple_repeat	1	51	(0)	3502056
16	4.3	4.0	0.0	chr6	131241629	131241638	(39564341)	+	(AT)n	Simple_repeat	2	11	(0)	3502057
319	27.7	16.6	0.6	chr6	136644594	136644780	(34161199)	+	MLT1L	LTR/ERVL-MaLR	1	217	(393)	3510221
3306	15.6	0.9	0.5	chr6	145536761	145537316	(25268663)	C	MER89	LTR/ERV1	(0)	559	2	3522886
1417	23.9	7.2	3.2	chr6	146778838	146779208	(24026771)	+	L1M4	LINE/L1	10	396	(7121)	3524489
2500	17.2	8.4	2.3	chr6	148137477	148137999	(22667980)	C	MER89	LTR/ERV1	(1)	558	1	3526381
686	28.5	4.7	7.6	chr6	148600633	148600962	(22205017)	+	HAL1	LINE/L1	1511	1830	(677)	3527179
2721	17.7	4.3	3.5	chr6	148601105	148601322	(22204657)	+	MER89	LTR/ERV1	5	225	(334)	3527180
2609	3.8	0.3	0.6	chr6	148601323	148601637	(22204342)	+	L1PA7	LINE/L1	5840	6153	(1)	3527181
2706	19.1	5.9	0.4	chr6	149200321	149200846	(21605133)	+	MER89	LTR/ERV1	1	557	(2)	3528048
21	13.4	0.0	0.0	chr6	158221155	158221187	(12584792)	+	(A)n	Simple_repeat	1	33	(0)	3542163
1000	26.0	3.5	10.1	chr6	159722411	159722646	(11083333)	C	L1MC5a	LINE/L1	(986)	1791	1571	3544493
2686	18.3	2.8	2.4	chr6	159722662	159723198	(11082781)	+	MER89	LTR/ERV1	1	539	(20)	3544498
31	13.9	0.0	0.0	chr6	160218913	160218977	(10587002)	+	(CAG)n	Simple_repeat	1	65	(0)	3545197
470	30.8	11.8	2.5	chr7	12207978	12208177	(147137796)	+	MIR	SINE/MIR	10	230	(32)	3577113
1867	28.2	3.3	3.9	chr7	54394420	54395112	(104950861)	+	L1MCa	LINE/L1	1	689	(5819)	3637310
384	15.6	3.0	0.0	chr7	57489851	57489914	(101856059)	+	AluJo	SINE/Alu	225	290	(22)	3642536
367	17.7	3.1	0.0	chr7	57495408	57495469	(101850504)	+	AluYj4	SINE/Alu	226	289	(22)	3642546
94	10.7	1.1	1.1	chr7	57495470	57495644	(101850329)	+	(GGAAT)n	Simple_repeat	1	177	(0)	3642547
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
288	23.1	1.2	1.9	chr7	65488938	65489682	(93856291)	+	(ATTCC)n	Simple_repeat	1	754	(0)	3647900
351	16.1	3.1	0.0	chr7	65489683	65489744	(93856229)	C	AluYj4	SINE/Alu	(22)	289	226	3647901
84	11.5	0.0	0.0	chr7	65489745	65489886	(93856087)	+	(CCATT)n	Simple_repeat	1	142	(0)	3647902
383	14.3	3.1	0.0	chr7	65489887	65489949	(93856024)	C	AluYj4	SINE/Alu	(22)	289	225	3647903
85	11.3	0.7	0.6	chr7	65489965	65490119	(93855854)	+	(TTCCA)n	Simple_repeat	1	156	(0)	3647904
48	19.0	0.9	2.6	chr7	65490120	65490168	(93855805)	+	(CTCCA)n	Simple_repeat	1	48	(0)	3647905
2893	1.9	0.0	0.0	chr7	65490169	65490477	(93855496)	C	AluYa5	SINE/Alu	(2)	309	1	3647906
372	30.1	8.0	3.2	chr7	76364817	76365005	(82980968)	+	MIR3	SINE/MIR	10	208	(0)	3671956
12549	14.5	1.3	1.6	chr7	92887021	92889845	(66456128)	C	L1PA10	LINE/L1	(3674)	2787	1	3694532
400	10.8	0.2	2.5	chr7	98810993	98811637	(60534336)	+	(TGG)n	Simple_repeat	1	646	(0)	3703453
523	29.6	9.6	6.1	chr7	99984594	99984823	(59361150)	C	MIR	SINE/MIR	(0)	262	24	3705603
532	27.1	7.3	3.7	chr7	134190734	134190997	(25154976)	C	L2c	LINE/L2	(1)	3425	3143	3757102
417	32.1	4.6	0.7	chr7	134191111	134191293	(25154680)	C	L2c	LINE/L2	(122)	3253	3069	3757102
38	4.2	4.1	0.0	chr7	150003131	150003179	(9342794)	+	(TG)n	Simple_repeat	1	51	(0)	3781443
328	16.4	7.8	3.8	chr7	150003183	150004275	(9341698)	+	(GT)n	Simple_repeat	1	1178	(0)	3781444
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
3410	24.7	9.4	8.7	chr8	6240396	6240895	(138897741)	+	L1ME3D	LINE/L1	3403	3971	(2175)	3801703
1776	16.1	21.4	4.0	chr8	6240896	6241209	(138897427)	+	MER89	LTR/ERV1	5	433	(126)	3801707
2170	11.6	0.0	4.6	chr8	6241210	6241536	(138897100)	+	AluSp	SINE/Alu	2	313	(0)	3801708
477	30.9	12.5	2.8	chr8	8613904	8614159	(136524477)	+	LTR81B	LTR/Gypsy	810	922	(471)	3805022
2754	18.9	4.7	0.6	chr8	8614160	8614692	(136523944)	C	MER89	LTR/ERV1	(2)	557	2	3805023
477	34.7	4.0	2.0	chr8	8614693	8614829	(136523807)	+	LTR81B	LTR/Gypsy	923	1061	(332)	3805022
2812	17.7	3.8	0.7	chr8	28044296	28044837	(117093799)	C	MER89	LTR/ERV1	(0)	559	1	3835439
1648	15.1	22.0	2.7	chr8	29830058	29830501	(115308135)	+	MLT2B4	LTR/ERVL	1	554	(2)	3838568
2824	20.3	1.4	1.2	chr8	29830550	29831107	(115307529)	+	MER89	LTR/ERV1	1	559	(0)	3838569
1656	11.6	0.0	0.0	chr8	40789476	40789716	(104348920)	+	L1MA3	LINE/L1	6065	6305	(0)	3855924
2514	19.8	6.8	1.3	chr8	40789717	40790202	(104348434)	+	MER89	LTR/ERV1	42	559	(0)	3855923
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
9953	10.6	0.1	0.7	chr8	85742400	85743923	(59394713)	C	L1P1	LINE/L1	(2125)	4021	2507	3914963
2736	16.6	7.2	0.6	chr8	89884862	89885383	(55253253)	+	MER89	LTR/ERV1	1	559	(0)	3920441
3015	16.4	2.9	0.7	chr8	123618967	123619508	(21519128)	C	MER89	LTR/ERV1	(0)	559	6	3972252
952	23.6	2.3	2.0	chr8	123619509	123619763	(21518873)	C	L1MC4	LINE/L1	(249)	7793	7538	3972251
289	25.2	8.4	5.1	chr8	140986626	140986842	(4151794)	+	L1MEd	LINE/L1	491	717	(5525)	4002934
4767	17.1	1.8	0.3	chr8	142240932	142241901	(2896735)	+	L1MEd	LINE/L1	4911	5895	(1108)	4004691
370	24.6	0.1	0.6	chr8	142241902	142242147	(2896489)	+	L1M4	LINE/L1	4909	5038	(1108)	4004693
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
40	0.0	0.0	0.0	chr9	2824045	2824081	(135570636)	+	(TAGGGT)n	Simple_repeat	1	37	(0)	4012710
189	29.3	10.8	0.0	chr9	2824136	2824193	(135570524)	+	L2b	LINE/L2	3306	3370	(5)	4012711
296	22.0	5.7	2.5	chr9	41229379	41230391	(97164326)	+	(TG)n	Simple_repeat	1	1071	(0)	4068370
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
235	23.8	4.5	3.8	chr9	63823016	63823908	(74570809)	+	(CA)n	Simple_repeat	1	933	(0)	4074777
268	8.8	1.9	1.9	chr9	70038166	70038638	(68356079)	+	(TGGAA)n	Simple_repeat	1	482	(0)	4082515
253	26.1	0.0	0.0	chr9	70038639	70038703	(68356014)	+	MER102a	DNA/hAT-Charlie	90	154	(176)	4082516
2148	21.7	7.0	0.0	chr9	70983493	70984012	(67410705)	C	MER89	LTR/ERV1	(0)	559	1	4084033
262	36.8	6.8	0.7	chr9	70984053	70984205	(67410512)	+	MIR	SINE/MIR	2	164	(98)	4084034
416	29.0	11.0	4.9	chr9	79371558	79371822	(59022895)	+	L2a	LINE/L2	3126	3408	(18)	4097157
187	36.9	8.7	0.0	chr9	79446522	79446605	(58948112)	C	LFSINE_Vert	SINE/tRNA	(109)	350	259	4097252
255	30.3	4.3	0.0	chr9	79550361	79550426	(58844291)	C	MLT1O	LTR/ERVL-MaLR	(372)	170	102	4097416
2758	18.3	3.4	0.7	chr9	79788488	79789031	(58605686)	C	MER89	LTR/ERV1	(0)	559	1	4097759
2471	20.6	1.4	5.1	chr9	87393020	87393552	(51001165)	+	MER89	LTR/ERV1	1	513	(46)	4109398
2447	16.1	9.8	1.8	chr9	96133395	96133906	(42260811)	+	MER89	LTR/ERV1	2	559	(0)	4122272
1918	15.2	6.0	1.4	chr9	105152509	105152856	(33241861)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	4137014
19055	11.7	2.2	2.8	chr9	105823225	105825378	(32569339)	C	L1M1	LINE/L1	(892)	6673	4549	4138062
1540	11.8	0.9	5.8	chr9	121649891	121650132	(16744585)	+	MER30	DNA/hAT-Charlie	1	230	(0)	4167461
286	8.8	9.5	2.4	chr9	134182441	134183092	(4211625)	+	(TG)n	Simple_repeat	1	714	(0)	4191688
2550	21.3	4.0	2.4	chr9	134489236	134489784	(3904933)	C	MER89	LTR/ERV1	(1)	558	1	4192077
243	4.6	0.0	2.1	chr9	137355408	137355734	(1038983)	+	(GAGGAAG)n	Simple_repeat	1	327	(0)	4195528
282	35.1	6.9	2.9	chr9	137715350	137715557	(679160)	C	L2a	LINE/L2	(18)	3408	3192	4196074
1827	25.2	7.2	3.8	chrX	20283703	20284408	(135756487)	C	L1MEb	LINE/L1	(5333)	737	6	4392884
17	12.3	0.0	5.1	chrX	41335055	41335093	(114705802)	+	G-rich	Low_complexity	1	39	(0)	4424167
2348	17.6	3.1	1.9	chrX	43448719	43449192	(112591703)	C	MER89	LTR/ERV1	(9)	550	71	4427334
3101	17.0	2.1	1.3	chrX	43534734	43535287	(112505608)	+	MER89	LTR/ERV1	1	559	(0)	4427467
1546	24.7	5.1	0.5	chrX	44432391	44432805	(111608090)	+	LTR16A	LTR/ERVL	17	451	(0)	4428851
876	16.5	0.0	0.0	chrX	44432837	44432963	(111607932)	+	AluJo	SINE/Alu	1	127	(185)	4428852
9338	18.9	1.5	0.8	chrX	113345272	113347016	(42693879)	C	L1PA12	LINE/L1	(4205)	3336	1047	4512698
6825	15.3	4.0	0.5	chrX	134727618	134728857	(21312038)	+	L1M4	LINE/L1	955	2239	(5278)	4543267
688	26.2	4.5	0.6	chrX	140723231	140725499	(15315396)	+	(AC)n	Simple_repeat	1	2370	(0)	4552693
534	23.6	15.4	1.6	chrX	152860749	152861043	(3179852)	C	L1ME3C	LINE/L1	(80)	6162	5814	4569510
1657	29.8	9.8	1.8	chrX	152861081	152862011	(3178884)	C	L1ME3C	LINE/L1	(1032)	5114	4102	4569510
297	24.6	0.0	0.0	chrY	10627178	10627242	(46600173)	C	AluJo	SINE/Alu	(20)	292	228	4587825
890	21.9	0.8	0.9	chrY	10627274	10627798	(46599617)	+	(CCATT)n	Simple_repeat	3	528	(0)	4587826
337	23.6	0.0	0.0	chrY	10632251	10632322	(46595093)	C	AluJo	SINE/Alu	(16)	296	225	4587848
282	23.3	1.1	0.7	chrY	10632322	10632659	(46594756)	+	(CATTC)n	Satellite	1	340	(0)	4587849
308	18.4	0.0	0.0	chrY	10652497	10652545	(46574870)	C	AluYa8	SINE/Alu	(39)	271	223	4587883
149	10.5	1.4	1.4	chrY	10664579	10664856	(46562559)	+	(CCATT)n	Simple_repeat	1	282	(0)	4587925
328	20.6	3.1	0.0	chrY	10686758	10686820	(46540595)	C	FRAM	SINE/Alu	(13)	153	89	4587996
75	7.6	0.0	0.0	chrY	10687986	10688083	(46539332)	+	(ATTCC)n	Simple_repeat	1	98	(0)	4588000
6112	24.5	0.6	0.4	chrY	10925266	10926566	(46300849)	+	(TTCCA)n	Simple_repeat	4	1309	(0)	4588455
358	14.3	0.0	0.0	chrY	10932083	10932131	(46295284)	C	AluYi6	SINE/Alu	(39)	272	224	4588464
6112	24.5	0.6	0.4	chrY	10932144	10932420	(46294995)	+	(TTCCA)n	Simple_repeat	3	280	(0)	4588465
6112	24.5	0.6	0.4	chrY	10939178	10940587	(46286828)	+	(TTCCA)n	Simple_repeat	5	1415	(0)	4588487
6112	24.5	0.6	0.4	chrY	10942264	10945531	(46281884)	+	(TTCCA)n	Simple_repeat	1	3273	(0)	4588495
4917	25.0	0.5	0.3	chrY	10945942	10948880	(46278535)	+	(TCCAC)n	Simple_repeat	1	2949	(0)	4588499
314	22.4	2.9	0.0	chrY	10950282	10950348	(46277067)	C	AluYj4	SINE/Alu	(18)	293	225	4588504
235	26.3	10.9	0.0	chrY	10950303	10950359	(46277056)	+	SVA_A	Retroposon/SVA	332	395	(992)	4588505
4917	25.0	0.5	0.3	chrY	10950360	10951162	(46276253)	+	(TCCAC)n	Simple_repeat	1	804	(0)	4588506
301	17.0	0.0	0.0	chrY	10958417	10958463	(46268952)	C	AluYj4	SINE/Alu	(41)	270	224	4588520
226	15.8	0.0	5.0	chrY	10958430	10958469	(46268946)	+	SVA_F	Retroposon/SVA	332	369	(1006)	4588521
1259	23.0	0.4	0.6	chrY	10958474	10959925	(46267490)	+	(CATTC)n	Satellite	1	1451	(0)	4588522
258	28.4	0.0	0.0	chrY	10974044	10974110	(46253305)	C	AluJb	SINE/Alu	(11)	291	225	4588566
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
315	20.6	3.1	0.0	chrY	11012144	11012206	(46215209)	C	AluYj4	SINE/Alu	(23)	288	224	4588685
248	15.5	0.0	4.7	chrY	11012166	11012212	(46215203)	+	SVA_F	Retroposon/SVA	330	380	(1004)	4588686
55	32.9	1.0	0.0	chrY	11012221	11012247	(46215168)	+	(TTCCA)n	Simple_repeat	1	28	(0)	4588687
85	6.9	0.0	0.0	chrY	11012248	11012354	(46215061)	+	(CATTC)n	Simple_repeat	1	107	(0)	4588688
55	32.9	1.0	0.0	chrY	11012355	11012527	(46214888)	+	(TTCCA)n	Simple_repeat	4	177	(0)	4588689
294	21.8	0.0	0.0	chrY	11024506	11024560	(46202855)	C	AluYj4	SINE/Alu	(33)	278	224	4588731
320	23.8	1.6	0.5	chrY	11031071	11031156	(46196259)	C	AluY	SINE/Alu	(9)	293	208	4588745
321	23.5	2.9	0.0	chrY	11039221	11039288	(46188127)	C	AluSz6	SINE/Alu	(18)	294	225	4588770
780	10.9	0.5	0.6	chrY	11181817	11186194	(46041221)	+	CER	Satellite	1	4374	(0)	4588950
741	17.6	1.4	0.7	chrY	11186186	11186322	(46041093)	+	MLT1A0	LTR/ERVL-MaLR	226	363	(2)	4588951
1464	23.6	8.9	4.8	chrY	11281374	11281813	(45945602)	C	MER21C	LTR/ERVL	(22)	916	457	4589057
10957	28.2	0.5	0.1	chrY	26637975	26643170	(30584245)	+	(AATGG)n	Simple_repeat	1	5205	(0)	4607157
10957	28.1	0.5	0.1	chrY	26643208	26653351	(30574064)	+	(AATGG)n	Simple_repeat	1	10181	(0)	4607159
10957	28.2	0.5	0.1	chrY	26653859	26659290	(30568125)	+	(AATGG)n	Simple_repeat	5	5454	(0)	4607165