2198	11.0	0.7	1.3	chr1	1016061	1016360	(247940062)	C	AluSx1	SINE/Alu	(14)	298	1	1282
16	24.5	1.6	3.2	chr1	1375060	1375120	(247581302)	+	(GCCCGGC)n	Simple_repeat	1	62	(0)	1639
19	15.5	3.7	3.6	chr1	32336172	32336255	(216620167)	+	(CTCCG)n	Simple_repeat	1	84	(0)	62647
792	25.0	12.6	0.4	chr1	44484198	44484434	(204471988)	C	MLT1J2	LTR/ERVL-MaLR	(178)	270	1	86109
687	15.2	10.6	13.7	chr1	44484718	44484862	(204471560)	+	MER105	DNA/hAT-Charlie	1	148	(55)	86110
1243	13.8	0.0	0.0	chr1	63288913	63289086	(185667336)	+	AluSc8	SINE/Alu	133	306	(5)	121764
2567	23.1	8.8	3.0	chr1	63289099	63290203	(185666219)	+	L1M1	LINE/L1	2640	3801	(3761)	121765
1095	12.1	0.0	0.0	chr1	92085591	92085731	(156870691)	+	AluSx3	SINE/Alu	143	283	(28)	163859
1841	16.9	0.3	3.3	chr1	92085747	92085819	(156870603)	+	AluJb	SINE/Alu	1	74	(238)	163860
3618	10.8	5.1	3.2	chr1	92085820	92086413	(156870009)	C	LTR14B	LTR/ERVK	(0)	608	3	163861
901	29.9	14.6	0.8	chr1	101009577	101010214	(147946208)	+	L2a	LINE/L2	2688	3426	(0)	177347
554	21.7	12.2	2.4	chr1	102973953	102974122	(145982300)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	179950
12	4.3	8.3	0.0	chr1	102974180	102974203	(145982219)	+	(AAAC)n	Simple_repeat	1	26	(0)	179951
2391	8.3	10.2	0.6	chr1	108478233	108478596	(140477826)	+	LTR7	LTR/ERV1	1	403	(47)	186798
47	0.0	2.2	0.0	chr1	108478597	108478642	(140477780)	+	(TAAA)n	Simple_repeat	1	47	(0)	186799
852	22.5	6.5	0.9	chr1	108478643	108478930	(140477492)	+	L1MEc	LINE/L1	1393	1736	(4679)	186797
1672	21.2	4.6	3.7	chr1	108478915	108478998	(140477424)	+	L1M3	LINE/L1	4179	4252	(1888)	186800
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
1305	7.9	0.0	0.6	chr1	145281116	145281281	(103675141)	+	U1	snRNA	1	165	(0)	210764
24	15.6	1.1	0.0	chr1	148522481	148522534	(100433888)	+	G-rich	Low_complexity	1	54	(0)	215837
1272	7.9	0.0	0.6	chr1	148522601	148522766	(100433656)	+	U1	snRNA	1	165	(0)	215838
366	31.6	6.8	14.8	chr1	162543046	162543349	(86413073)	+	L2a	LINE/L2	3106	3422	(4)	239329
3322	15.5	5.1	6.4	chr1	162543351	162543879	(86412543)	C	LTR8A	LTR/ERV1	(0)	727	212	239330
2086	14.3	0.0	3.4	chr1	212901091	212901412	(36055010)	C	AluSz6	SINE/Alu	(1)	311	1	315409
13468	24.3	7.7	3.8	chr1	212901413	212902399	(36054023)	+	L1M3c	LINE/L1	2718	3747	(3812)	315408
1987	14.1	1.1	1.1	chr1	224011691	224016553	(24939869)	+	(AATGG)n	Simple_repeat	1	4914	(0)	331634
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
575	20.6	9.5	3.1	chr1	236381431	236381632	(12574790)	C	L1MEc	LINE/L1	(4267)	2133	1914	351509
561	17.3	3.0	5.9	chr1	236381671	236381805	(12574617)	C	L1MEc	LINE/L1	(4803)	1597	1467	351509
627	19.6	5.4	3.9	chr1	236381806	236381962	(12574460)	C	FLAM_C	SINE/Alu	(0)	301	2	351511
5419	19.8	7.3	2.7	chr1	236381965	236383112	(12573310)	C	L1MEc	LINE/L1	(4947)	1453	234	351509
2438	12.4	0.6	1.9	chr10	29301017	29301385	(104496037)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	416644
1838	14.7	2.5	2.8	chr10	29301386	29301489	(104495933)	C	AluJb	SINE/Alu	(201)	111	2	416643
2179	28.1	11.2	2.7	chr10	29301499	29302210	(104495212)	C	L1MEc	LINE/L1	(4819)	1581	801	416640
11650	15.3	3.7	3.5	chr10	59921581	59923756	(73873666)	+	L1M4c	LINE/L1	24	2202	(4182)	456299
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
5642	21.1	1.6	0.7	chr11	26364841	26365954	(108720668)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1651	528	612367
2124	9.5	3.2	1.0	chr11	61391207	61391252	(73695370)	+	AluSq2	SINE/Alu	1	47	(266)	660081
32	0.0	0.0	0.0	chr11	61391253	61391282	(73695340)	+	(G)n	Simple_repeat	1	30	(0)	660082
2124	9.5	3.2	1.0	chr11	61391283	61391540	(73695082)	+	AluSq2	SINE/Alu	48	311	(2)	660081
2729	25.0	6.3	2.1	chr11	70750253	70752084	(64334538)	+	L1MEf	LINE/L1	322	2598	(4042)	677303
2798	6.1	0.0	0.0	chr11	76048899	76049243	(59037379)	+	LTR18C	LTR/ERVL	1	345	(0)	687253
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
18300	3.7	0.3	0.1	chr11	94238529	94241278	(40845344)	C	L1PA4	LINE/L1	(372)	5782	3028	716863
7537	20.2	7.8	4.7	chr11	129225119	129228448	(5858174)	+	L1M4	LINE/L1	848	4090	(2916)	769994
3027	21.4	11.2	3.7	chr11	130656736	130657560	(4429062)	+	L1MEc	LINE/L1	1312	2180	(4220)	772232
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
759	15.2	4.6	0.8	chr12	24964350	24964474	(108310835)	C	AluJr4	SINE/Alu	(179)	133	4	815722
1304	16.3	3.8	1.6	chr12	24964480	24964791	(108310518)	C	L1MEc	LINE/L1	(4803)	1597	1279	815723
1856	4.6	4.2	0.2	chr12	127165908	127166171	(6109138)	C	LSU-rRNA_Hsa	rRNA	(1)	5034	4720	981018
134	1.9	3.0	2.3	chr12	127166172	127166337	(6108972)	+	(CCGAGGCCGA)n	Simple_repeat	1	171	(0)	981019
300	22.7	4.3	5.7	chr13	56583618	56583757	(57780571)	C	L1MEf	LINE/L1	(4155)	2260	2123	1048545
1867	33.0	9.1	1.8	chr13	56583753	56584319	(57780009)	C	L1MEf	LINE/L1	(4763)	1652	1042	1048545
409	32.2	7.1	4.2	chr13	63184610	63184988	(51179340)	+	MLT1H1	LTR/ERVL-MaLR	5	436	(113)	1056947
9103	12.8	5.8	3.1	chr13	63529760	63530933	(50833395)	C	L1M1	LINE/L1	(2159)	3830	2591	1057401
2253	12.1	4.5	0.0	chr13	63530934	63531272	(50833056)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1057403
15223	10.0	2.8	1.1	chr13	64119798	64121618	(50242710)	C	L1PA5	LINE/L1	(4320)	1864	4	1058147
1623	12.0	12.6	0.8	chr13	65985657	65985915	(48378413)	+	AluSq	SINE/Alu	1	294	(19)	1060481
1131	28.4	5.6	12.0	chr13	65985916	65985968	(48378360)	C	MLT1F2	LTR/ERVL-MaLR	(501)	59	5	1060480
1624	20.3	0.3	2.6	chr13	72868018	72868327	(41496001)	+	AluJr	SINE/Alu	1	303	(9)	1069475
5542	11.7	16.8	5.3	chr13	85362955	85364056	(29000272)	+	LTR12D	LTR/ERV1	1	1254	(0)	1086446
4295	0.8	0.0	0.0	chr13	87181239	87181723	(27182605)	C	L1HS	LINE/L1	(0)	6155	5671	1088679
500	33.0	6.8	3.7	chr13	87181724	87181804	(27182524)	C	L1ME2	LINE/L1	(1252)	4894	4826	1088678
1137	8.9	0.0	0.0	chr13	87181833	87181967	(27182361)	C	AluYh3	SINE/Alu	(44)	267	133	1088680
2176	4.0	0.0	0.0	chr14	19668195	19668466	(87375252)	+	L1PA6	LINE/L1	5515	5786	(368)	1127019
16	28.9	0.0	3.2	chr14	19668474	19668535	(87375183)	+	(GCG)n	Simple_repeat	1	62	(0)	1127020
4597	26.1	8.9	5.3	chr14	93517947	93521730	(13521988)	C	L1MEc	LINE/L1	(2319)	4000	44	1239599
1663	25.8	14.3	2.4	chr14	101209365	101209855	(5833863)	C	L1PA7	LINE/L1	(4332)	2052	1461	1252874
615	30.1	5.7	0.5	chr14	101209861	101210077	(5833641)	C	L1PA7	LINE/L1	(5823)	490	262	1252874
2251	6.7	4.8	1.1	chr15	20340242	20344102	(81647087)	+	(AGCCAGCCA)n	Simple_repeat	1	4048	(0)	1263201
10867	16.1	7.6	2.2	chr15	69222807	69224932	(32766257)	C	L1MB3	LINE/L1	(4113)	2271	22	1339825
7189	20.0	8.3	0.6	chr15	100120114	100121741	(1869448)	+	L1M4c	LINE/L1	15	1778	(4606)	1391028
293	19.4	4.0	0.0	chr16	1025186	1025257	(89313088)	C	MER2	DNA/TcMar-Tigger	(3)	342	268	1395420
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
888	6.7	4.2	0.7	chr16	33340034	33340155	(56998190)	C	LTR13A	LTR/ERVK	(840)	126	1	1462584
330	24.4	1.2	2.4	chr16	34071698	34071779	(56266566)	+	AluJb	SINE/Alu	208	288	(24)	1463578
235	29.4	7.0	0.5	chr16	60484449	60484633	(29853712)	C	MLT1H2	LTR/ERVL-MaLR	(290)	199	12	1490430
1810	19.8	3.7	4.2	chr16	74246549	74247068	(16091277)	+	MLT2B4	LTR/ERVL	1	514	(6)	1514265
351	27.1	11.0	0.0	chr17	510520	510648	(82746793)	+	MIRb	SINE/MIR	61	205	(63)	1545286
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
993	4.0	0.0	0.0	chr17	32822870	32822994	(50434447)	+	L1PA5	LINE/L1	6030	6154	(0)	1597471
301	21.1	8.8	11.9	chr17	43232365	43232482	(40024959)	+	MER96B	DNA/hAT-Tip100	1	114	(303)	1617360
2018	19.7	0.5	1.4	chr17	43232486	43232908	(40024533)	+	LTR13	LTR/ERVK	1	419	(588)	1617361
20	30.1	1.0	4.0	chr17	48430246	48430345	(34827096)	+	G-rich	Low_complexity	1	101	(0)	1627828
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
404	29.5	6.2	1.8	chr18	36229002	36229277	(44144008)	C	L1MB1	LINE/L1	(4344)	3221	2933	1734513
3142	21.9	4.6	3.0	chr18	36229269	36230087	(44143198)	C	L1MB1	LINE/L1	(4516)	2970	1979	1734513
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
457	26.6	6.0	0.0	chr19	551102	551289	(58066327)	C	L1MB7	LINE/L1	(136)	6048	5849	1797123
12739	0.5	0.0	2.1	chr19	36270447	36272042	(22345574)	+	SST1	Satellite/centr	1	1563	(0)	1862253
24	29.7	0.0	2.5	chr19	36272043	36272123	(22345493)	+	(GT)n	Simple_repeat	1	81	(0)	1862254
26	23.7	3.8	3.6	chr19	36272113	36272129	(22345487)	+	(CTGTCT)n	Simple_repeat	1	66	(44)	1862255
36	20.5	1.2	1.2	chr19	36272130	36272209	(22345407)	+	(TC)n	Simple_repeat	1	81	(0)	1862256
11383	1.6	0.0	2.0	chr19	36308415	36309981	(22307635)	+	SST1	Satellite/centr	1	1535	(28)	1862299
232	30.1	5.2	0.4	chr19	55670357	55670454	(2947162)	C	L2a	LINE/L2	(18)	3408	3251	1904263
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
623	32.8	7.1	0.9	chr2	36646418	36646734	(205546795)	+	MLT1I	LTR/ERVL-MaLR	74	411	(0)	1966293
725	18.8	2.2	0.0	chr2	36646933	36647065	(205546464)	+	Tigger3	DNA/TcMar-Tigger	1	136	(2893)	1966294
4634	13.5	4.8	1.2	chr2	36647076	36647909	(205545620)	+	Tigger3b	DNA/TcMar-Tigger	366	1231	(0)	1966295
1208	7.9	17.4	0.5	chr2	65231758	65231948	(176961581)	C	MER30	DNA/hAT-Charlie	(0)	230	1	2010883
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
21	8.8	2.8	0.0	chr2	91478098	91478133	(150715396)	+	(CCG)n	Simple_repeat	1	37	(0)	2048369
2222	20.5	6.4	3.0	chr2	98422027	98422795	(143770734)	+	L1M4b	LINE/L1	1391	2362	(710)	2054999
2191	12.9	0.0	1.6	chr2	98422796	98423106	(143770423)	+	AluSx	SINE/Alu	2	307	(5)	2055000
3621	9.3	4.4	0.4	chr2	112044492	112044989	(130148540)	C	LTR17	LTR/ERV1	(6)	774	256	2074462
5185	19.7	5.1	9.4	chr2	112044994	112045021	(130148508)	C	L1MEc	LINE/L1	(4811)	1589	1568	2074460
2107	15.1	0.0	0.0	chr2	112045022	112045319	(130148210)	C	AluSz6	SINE/Alu	(14)	298	1	2074464
5185	19.7	5.1	9.4	chr2	112045320	112046919	(130146610)	C	L1MEc	LINE/L1	(4833)	1567	35	2074460
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
2214	24.8	5.0	2.2	chr2	196430327	196431086	(45762443)	+	L1M4a1	LINE/L1	922	1703	(876)	2192379
337	23.9	2.1	0.0	chr2	231848548	231848637	(10344892)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247744
371	22.8	2.1	0.0	chr2	231848638	231848727	(10344802)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247744
361	22.8	2.1	0.0	chr2	231848765	231848856	(10344673)	+	MER20	DNA/hAT-Charlie	126	219	(0)	2247745
343	24.2	2.1	0.0	chr2	231848894	231848984	(10344545)	+	MER20	DNA/hAT-Charlie	126	218	(1)	2247746
618	26.6	3.9	9.1	chr20	18793954	18794451	(45649716)	+	MLT2F	LTR/ERVL	5	663	(0)	2293236
21	30.9	1.4	0.0	chr20	25867722	25867792	(38576375)	+	GA-rich	Low_complexity	1	72	(0)	2302877
2308	29.1	5.8	6.1	chr20	25867794	25869361	(38574806)	C	SST1	Satellite/centr	(1)	1562	1	2302878
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
29	29.8	2.9	2.1	chr20	30814535	30814670	(33629497)	+	(ACAC)n	Simple_repeat	1	140	(0)	2305474
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
40632	0.2	1.2	0.8	chr21	8214773	8218941	(38491042)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373279
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
24	15.5	7.0	0.0	chr21	8401981	8402037	(38307946)	+	(CG)n	Simple_repeat	1	61	(0)	2373511
14	13.3	9.8	0.0	chr21	8402028	8402068	(38307915)	+	(CGTC)n	Simple_repeat	1	45	(0)	2373512
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
25399	0.2	1.5	0.8	chr21	8441146	8441992	(38267991)	+	LSU-rRNA_Hsa	rRNA	1	877	(4158)	2373624
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
627	27.0	2.1	1.6	chr21	9257721	9257908	(37452075)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	2374356
355	21.0	6.9	0.0	chr21	9257924	9258004	(37451979)	+	MER21C	LTR/ERVL	30	116	(822)	2374357
490	25.4	1.5	5.0	chr21	9258040	9258180	(37451803)	+	MER21C	LTR/ERVL	99	234	(634)	2374357
1574	22.3	7.7	4.1	chr21	9258166	9258605	(37451378)	+	MER21C	LTR/ERVL	457	913	(25)	2374357
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
21	16.7	0.0	2.4	chr21	9819273	9819314	(36890669)	+	(AC)n	Simple_repeat	1	42	(0)	2374898
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
41	2.5	0.0	0.0	chr21	9820677	9820716	(36889267)	+	(AC)n	Simple_repeat	1	40	(0)	2374901
1751	29.7	4.9	6.1	chr21	9820724	9822018	(36887965)	C	SST1	Satellite/centr	(1)	1562	284	2374902
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
1523	28.6	6.2	6.9	chr21	9836200	9837509	(36872474)	C	SST1	Satellite/centr	(1)	1562	262	2374935
2875	25.9	2.3	2.8	chr21	10338090	10338991	(36370992)	+	L1MA6	LINE/L1	5394	6291	(9)	2375377
404	28.3	11.0	2.7	chr21	10427070	10427382	(36282601)	C	L2c	LINE/L2	(213)	3174	2827	2375541
25	15.4	0.0	0.0	chr21	10427515	10427557	(36282426)	+	(CA)n	Simple_repeat	1	43	(0)	2375542
620	23.1	11.5	2.4	chr21	10427740	10427952	(36282031)	C	MIR	SINE/MIR	(11)	251	17	2375543
2330	12.7	4.1	0.4	chr21	41792344	41792802	(4917181)	C	Ricksha_b	DNA/MULE-MuDR	(641)	614	26	2418017
2797	24.5	5.2	3.7	chr21	41792803	41793161	(4916822)	C	L1MEc	LINE/L1	(874)	1806	1319	2418014
1062	7.7	0.0	0.0	chr22	11310020	11310186	(39508282)	C	BSR/Beta	Satellite	(0)	167	1	2425025
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
530	23.4	6.1	1.9	chr22	11572555	11572711	(39245757)	+	MIRb	SINE/MIR	33	196	(72)	2425189
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
1249	21.0	6.5	1.2	chr22	11896731	11897053	(38921415)	C	L1MB8	LINE/L1	(5)	6173	5833	2425507
2301	14.0	7.0	0.5	chr22	11897054	11897465	(38921003)	C	MER61C	LTR/ERV1	(0)	428	4	2425508
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
4303	21.4	4.2	4.2	chr22	23228562	23229792	(27588676)	C	L1MEf	LINE/L1	(4676)	1957	727	2437979
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
19	13.0	0.0	0.0	chr3	51538798	51538831	(146756728)	+	(CCG)n	Simple_repeat	1	34	(0)	2574563
14	17.3	5.1	0.0	chr3	51538872	51538910	(146756649)	+	(CGGCG)n	Simple_repeat	1	41	(0)	2574564
3224	23.7	6.5	12.3	chr3	73250841	73251045	(125044514)	C	L1MEf	LINE/L1	(4714)	1528	1477	2610898
32	3.2	0.0	0.0	chr3	73251046	73251077	(125044482)	+	(TG)n	Simple_repeat	1	32	(0)	2610899
3224	25.2	5.8	8.6	chr3	73251078	73251623	(125043936)	C	L1MEf	LINE/L1	(4766)	1476	951	2610898
5343	15.4	2.9	1.8	chr3	94323327	94324231	(103971328)	C	Tigger4	DNA/TcMar-Tigger	(1812)	919	4	2634158
242	36.4	5.5	5.1	chr3	115234921	115235389	(83060170)	C	L2c	LINE/L2	(568)	2851	2381	2661841
1857	27.9	3.5	9.6	chr3	129099686	129100375	(69195184)	+	L1M4a1	LINE/L1	1395	2082	(670)	2683036
326	22.4	0.0	0.0	chr3	129100376	129100433	(69195126)	+	AluJo	SINE/Alu	234	291	(21)	2683040
269	23.7	21.4	4.8	chr3	139537612	139537800	(58757759)	+	MIRb	SINE/MIR	1	242	(26)	2699492
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
310	39.0	2.3	1.9	chr4	9271577	9271832	(180942723)	C	L1M4	LINE/L1	(1192)	4954	4698	2802923
38	12.6	0.0	0.0	chr4	9271890	9271958	(180942597)	+	(CA)n	Simple_repeat	1	69	(0)	2802924
863	17.6	1.2	0.2	chr4	49090455	49091234	(141123321)	+	ALR/Alpha	Satellite/centr	1	788	(0)	2864886
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
14	13.7	0.0	5.6	chr4	49289254	49289289	(140925266)	+	(TTTTGC)n	Simple_repeat	1	36	(0)	2865068
1804	12.9	6.2	0.0	chr4	49289292	49289578	(140924977)	C	L1PA10	LINE/L1	(0)	6168	5863	2865069
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
2364	19.6	5.0	4.4	chr4	49493900	49494948	(140719607)	+	L1MB8	LINE/L1	4777	5836	(342)	2865154
2241	13.0	7.3	0.5	chr4	49494958	49495361	(140719194)	+	MER61C	LTR/ERV1	11	428	(0)	2865155
765	23.2	4.1	11.8	chr4	49510094	49510415	(140704140)	C	L1MB8	LINE/L1	(43)	6135	5840	2865174
69	6.2	0.0	0.0	chr4	49510486	49510569	(140703986)	+	(TCCT)n	Simple_repeat	1	84	(0)	2865175
304	22.8	0.0	0.0	chr4	49510858	49510914	(140703641)	C	MER47C	DNA/TcMar-Tigger	(28)	69	13	2865176
418	23.3	3.5	4.1	chr4	57179451	57179591	(133034964)	C	MIRc	SINE/MIR	(67)	201	59	2874102
952	16.9	0.0	0.0	chr4	83378319	83378460	(106836095)	C	AluJb	SINE/Alu	(170)	142	1	2909414
2231	14.2	1.7	1.7	chr4	83378461	83378549	(106836006)	+	MER72	LTR/ERV1	365	454	(268)	2909409
1963	17.4	19.7	4.8	chr4	83378550	83379067	(106835488)	+	LTR18B	LTR/ERVL	1	614	(0)	2909415
2810	23.6	12.2	2.1	chr4	107705646	107707840	(82506715)	C	L1MA8	LINE/L1	(4372)	3193	464	2942407
4386	25.0	7.0	4.2	chr4	123290866	123294065	(66920490)	C	L1PB3	LINE/L1	(3568)	3347	348	2963740
2602	24.8	6.3	1.7	chr4	124910658	124912222	(65302333)	C	L1MA9	LINE/L1	(3118)	3727	1908	2965894
2482	7.0	0.3	1.0	chr4	124912223	124912522	(65302033)	C	AluY	SINE/Alu	(13)	298	1	2965899
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
4338	12.6	1.4	2.4	chr5	106535765	106535989	(75002270)	C	L1PA13	LINE/L1	(508)	5655	5437	3195260
2514	16.8	4.5	1.8	chr5	149400044	149400497	(32137762)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	3257647
379	27.8	13.7	3.1	chr5	149400498	149400576	(32137683)	+	LTR67B	LTR/ERVL	279	372	(248)	3257646
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
1772	28.9	4.0	1.7	chr6	9631465	9632308	(161173671)	+	L1M4a1	LINE/L1	617	1758	(821)	3328357
12	20.0	0.0	2.8	chr6	9632384	9632419	(161173560)	+	(TTATAT)n	Simple_repeat	1	36	(0)	3328358
4771	22.0	6.8	7.1	chr6	16944634	16945046	(153860933)	C	L1MEf	LINE/L1	(4730)	1470	1022	3340303
595	29.5	10.2	1.6	chr6	51705187	51705499	(119100480)	C	L2c	LINE/L2	(1257)	2162	1820	3397424
368	27.1	6.9	2.4	chr6	51705603	51705727	(119100252)	+	MamTip2	DNA/hAT-Tip100	71	201	(104)	3397427
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
1996	13.6	3.1	0.9	chr6	136464302	136464620	(34341359)	+	MER44A	DNA/TcMar-Tigger	14	339	(0)	3509928
694	21.1	12.4	3.1	chr6	136464766	136464993	(34340986)	C	L2a	LINE/L2	(0)	3426	3167	3509929
2230	12.5	0.0	0.7	chr6	143213489	143213816	(27592163)	C	AluSx1	SINE/Alu	(0)	312	1	3519542
199	28.9	9.0	7.3	chr6	157780125	157780288	(13025691)	+	MIR	SINE/MIR	44	210	(52)	3541456
388	35.6	4.6	3.7	chr6	168614431	168615747	(2190232)	+	TAR1	Satellite/telo	1	1328	(552)	3555632
332	28.3	12.2	3.2	chr6	170450086	170450271	(355708)	+	MIRb	SINE/MIR	44	248	(20)	3557442
112	24.9	0.7	1.7	chr7	4083573	4083862	(155262111)	+	(CCTC)n	Simple_repeat	1	292	(0)	3564226
989	27.9	9.4	14.3	chr7	4083893	4084657	(155261316)	C	L1MC5a	LINE/L1	(691)	2086	1328	3564223
2458	9.8	0.0	0.0	chr7	25085458	25085764	(134260209)	+	AluSc	SINE/Alu	1	307	(2)	3594884
1272	9.4	3.4	0.6	chr7	25085766	25085936	(134260037)	+	AluSp	SINE/Alu	130	305	(8)	3594885
2912	21.5	4.5	8.1	chr7	25085941	25086271	(134259702)	+	L1MEf	LINE/L1	1348	1686	(4556)	3594879
2637	21.2	7.4	6.3	chr7	46963268	46964190	(112381783)	+	L1MB5	LINE/L1	1124	2155	(4570)	3627905
12	15.8	0.0	3.3	chr7	46964199	46964228	(112381745)	+	(TTTTG)n	Simple_repeat	1	30	(0)	3627906
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
31	0.0	0.0	0.0	chr7	106101439	106101467	(53244506)	+	(C)n	Simple_repeat	1	29	(0)	3717099
719	22.5	0.6	3.0	chr7	128712891	128713023	(30632950)	C	MLT1J	LTR/ERVL-MaLR	(340)	172	42	3747855
2084	14.4	0.3	0.7	chr7	128713024	128713328	(30632645)	+	AluSz	SINE/Alu	1	304	(8)	3747856
773	34.7	7.1	0.5	chr7	135574235	135574787	(23771186)	C	L2a	LINE/L2	(73)	3353	2772	3759223
1201	26.8	10.6	3.0	chr7	152960958	152961286	(6384687)	+	L1MCc	LINE/L1	1911	2253	(4784)	3786264
269	22.5	12.3	0.0	chr7	152961291	152961361	(6384612)	+	MLT1B	LTR/ERVL-MaLR	1	81	(309)	3786268
1588	24.9	7.9	1.6	chr7	152961364	152961949	(6384024)	+	L1MCc	LINE/L1	2450	3094	(3847)	3786264
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
1302	14.6	0.0	20.1	chr8	1844785	1845148	(143293488)	+	AluJb	SINE/Alu	1	291	(21)	3796167
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
828	29.3	5.5	3.9	chr8	57210498	57210965	(87927671)	C	MER50	LTR/ERV1	(231)	503	28	3874994
3326	25.7	3.9	2.2	chr8	69172913	69174215	(75964421)	C	L1MB2	LINE/L1	(4302)	2082	795	3891634
13	28.3	5.4	1.3	chr8	94720070	94720143	(50418493)	+	(GGCGGT)n	Simple_repeat	1	78	(0)	3927428
1343	12.5	0.0	2.6	chr8	143669001	143669192	(1469444)	+	AluSq	SINE/Alu	117	303	(10)	4006489
1078	14.0	0.2	0.5	chr8	143669231	143669438	(1469198)	C	LTR10B1	LTR/ERV1	(55)	492	240	4006487
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
3068	18.3	6.0	7.9	chr9	35009983	35010642	(103384075)	+	L1M4	LINE/L1	1247	1928	(5589)	4058216
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
2707	27.2	7.3	5.5	chr9	61855698	61856977	(76537740)	+	SST1	Satellite/centr	263	1561	(2)	4072475
15	5.6	0.0	0.0	chr9	61856982	61857000	(76537717)	+	(TG)n	Simple_repeat	1	19	(0)	4072477
23	25.6	1.7	0.0	chr9	61857000	61857059	(76537658)	+	(TC)n	Simple_repeat	1	61	(0)	4072478
1951	29.4	5.2	6.5	chr9	61857061	61858378	(76536339)	+	SST1	Satellite/centr	262	1562	(1)	4072479
2605	29.9	5.1	4.7	chr9	65388281	65390272	(73004445)	+	SST1	Satellite/centr	1	2001	(859)	4076190
7004	21.2	4.4	1.9	chr9	105733340	105735872	(32658845)	C	L1M2a	LINE/L1	(2381)	5178	2586	4137996
1383	17.6	0.4	8.3	chr9	105735877	105736166	(32658551)	C	AluJr	SINE/Alu	(22)	290	24	4137997
955	34.0	4.7	2.7	chr9	113062933	113063595	(25331122)	+	L1MA9	LINE/L1	5622	6298	(14)	4150944
1546	24.7	5.1	0.5	chrX	44432391	44432805	(111608090)	+	LTR16A	LTR/ERVL	17	451	(0)	4428851
876	16.5	0.0	0.0	chrX	44432837	44432963	(111607932)	+	AluJo	SINE/Alu	1	127	(185)	4428852
1941	15.4	1.3	1.6	chrX	50743449	50743754	(105297141)	C	AluJr	SINE/Alu	(5)	307	3	4439778
4875	25.6	9.1	6.4	chrX	50743755	50745985	(105294910)	C	L1M4b	LINE/L1	(4549)	2318	26	4439775
15	21.4	4.4	0.0	chrX	73944061	73944105	(82096790)	+	A-rich	Low_complexity	1	47	(0)	4464970
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
297	24.6	0.0	0.0	chrY	10627178	10627242	(46600173)	C	AluJo	SINE/Alu	(20)	292	228	4587825
890	21.9	0.8	0.9	chrY	10627274	10627798	(46599617)	+	(CCATT)n	Simple_repeat	3	528	(0)	4587826
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
1464	23.6	8.9	4.8	chrY	11281374	11281813	(45945602)	C	MER21C	LTR/ERVL	(22)	916	457	4589057
249	31.4	10.8	10.1	chrY	11287602	11287738	(45939677)	C	LTR48	LTR/ERV1	(13)	631	502	4589062
27	0.0	3.3	0.0	chrY	11287739	11287768	(45939647)	+	(AAAAC)n	Simple_repeat	1	31	(0)	4589063
307	25.3	11.2	7.7	chrY	11287769	11288013	(45939402)	C	LTR48	LTR/ERV1	(143)	501	189	4589062