2198	11.0	0.7	1.3	chr1	1016061	1016360	(247940062)	C	AluSx1	SINE/Alu	(14)	298	1	1282
1595	20.5	3.3	4.8	chr1	1113212	1113335	(247843087)	+	MER50	LTR/ERV1	612	734	(0)	1375
652	12.4	0.0	0.0	chr1	1113435	1113531	(247842891)	C	AluJb	SINE/Alu	(54)	258	162	1377
1483	18.7	7.6	2.4	chr1	1113585	1113913	(247842509)	C	MER50	LTR/ERV1	(56)	678	326	1378
2356	7.8	0.0	2.3	chr1	1113914	1114221	(247842201)	C	AluSx4	SINE/Alu	(9)	301	1	1379
271	28.7	0.5	4.3	chr1	7510239	7510349	(241446073)	C	MER5B	DNA/hAT-Charlie	(36)	153	47	9922
2502	7.3	0.3	0.0	chr1	8045769	8046071	(240910351)	+	AluSp	SINE/Alu	1	304	(9)	10812
554	17.7	10.3	0.1	chr1	9634865	9635007	(239321415)	+	MLT1C	LTR/ERVL-MaLR	6	177	(213)	14032
1968	12.5	5.7	0.0	chr1	9635012	9635290	(239321132)	+	AluSx	SINE/Alu	3	298	(14)	14033
217	28.2	1.7	0.0	chr1	13547196	13547267	(235409155)	+	L2c	LINE/L2	3259	3347	(40)	21636
703	28.8	5.0	1.3	chr1	13547297	13547528	(235408894)	C	MIR	SINE/MIR	(15)	247	7	21637
1973	10.6	0.0	1.1	chr1	20333228	20333491	(228622931)	+	AluSx1	SINE/Alu	37	297	(15)	35547
349	32.4	0.6	6.4	chr1	20333492	20333610	(228622812)	+	MER5A	DNA/hAT-Charlie	73	184	(5)	35546
244	24.7	4.9	2.5	chr1	20333876	20333954	(228622468)	C	MER102c	DNA/hAT-Charlie	(1)	330	250	35548
37	22.5	2.3	0.0	chr1	20707845	20707932	(228248490)	+	(TA)n	Simple_repeat	1	90	(0)	36395
808	17.1	0.0	1.6	chr1	20708338	20708466	(228247956)	C	AluJb	SINE/Alu	(58)	254	128	36396
847	10.2	7.5	3.1	chr1	21861376	21861502	(227094920)	+	FLAM_C	SINE/Alu	1	133	(10)	38833
257	31.1	7.4	5.2	chr1	21861503	21861571	(227094851)	C	L2c	LINE/L2	(378)	3009	2940	38832
1903	13.6	0.0	6.3	chr1	27243844	27244159	(221712263)	+	AluJb	SINE/Alu	1	296	(16)	51312
244	28.7	3.9	12.9	chr1	27244180	27244319	(221712103)	C	MIR	SINE/MIR	(128)	134	8	51311
1929	15.0	0.0	4.9	chr1	27244321	27244646	(221711776)	C	AluJr4	SINE/Alu	(2)	310	1	51313
2286	6.2	0.0	0.0	chr1	27702405	27702677	(221253745)	+	AluY	SINE/Alu	37	309	(2)	52332
2205	14.5	2.5	8.8	chr1	27702678	27702807	(221253615)	+	MER65A	LTR/ERV1	322	445	(0)	52330
1933	23.0	8.4	6.8	chr1	27702814	27703499	(221252923)	+	MER65-int	LTR/ERV1	11	708	(4163)	52330
307	25.7	9.5	2.3	chr1	28643556	28643718	(220312704)	C	MIRb	SINE/MIR	(19)	249	29	54769
2369	11.3	0.0	0.0	chr1	28837368	28837676	(220118746)	+	AluSc	SINE/Alu	1	309	(0)	55273
735	16.2	5.6	0.0	chr1	28837703	28837819	(220118603)	C	AluJb	SINE/Alu	(187)	125	2	55271
724	15.0	11.6	0.7	chr1	28837823	28837976	(220118446)	C	MLT1C	LTR/ERVL-MaLR	(289)	178	6	55269
307	26.6	5.0	1.1	chr1	28837980	28838074	(220118348)	+	MIRb	SINE/MIR	112	210	(58)	55274
1784	14.8	4.1	0.7	chr1	34685493	34685778	(214270644)	C	MLT1C	LTR/ERVL-MaLR	(27)	440	145	67222
1336	17.4	3.2	3.9	chr1	34685963	34686243	(214270179)	+	L1MB4	LINE/L1	5902	6180	(0)	67223
449	25.6	5.5	0.0	chr1	36180989	36181109	(212775313)	C	L2a	LINE/L2	(0)	3426	3299	70295
11687	20.0	1.9	4.3	chr1	39949475	39950696	(209005726)	C	MER21-int	LTR/ERVL	(2984)	1207	1	77760
2612	19.1	4.2	3.3	chr1	39950697	39951238	(209005184)	C	MER21A	LTR/ERVL	(0)	931	385	77760
10846	14.2	0.9	0.6	chr1	43109605	43110139	(205846283)	C	MSTA-int	LTR/ERVL-MaLR	(1095)	536	3	83789
2148	14.3	11.7	1.1	chr1	43110141	43110522	(205845900)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	83789
2911	11.8	1.6	1.6	chr1	44886501	44886932	(204069490)	+	MER57A1	LTR/ERV1	1	432	(0)	86913
5802	11.8	4.2	1.2	chr1	44886933	44887656	(204068766)	+	MER57-int	LTR/ERV1	1	757	(6780)	86913
1326	23.3	0.0	0.0	chr1	51852645	51852906	(197103516)	+	LTR39-int	LTR/ERV1	7859	8120	(924)	99563
2313	9.2	2.8	0.3	chr1	51852942	51853225	(197103197)	+	AluSx3	SINE/Alu	1	291	(20)	99564
17	0.0	4.8	0.0	chr1	51853226	51853246	(197103176)	+	(TA)n	Simple_repeat	1	22	(0)	99565
4107	18.3	4.8	4.3	chr1	51853318	51854088	(197102334)	+	LTR39-int	LTR/ERV1	8154	8935	(109)	99563
212	27.8	2.7	5.3	chr1	57623874	57623949	(191332473)	+	MIRb	SINE/MIR	159	232	(36)	111195
340	29.2	18.4	0.0	chr1	57624044	57624180	(191332242)	+	MIRb	SINE/MIR	94	261	(7)	111196
423	23.8	3.9	2.4	chr1	57624282	57624406	(191332016)	+	MIRb	SINE/MIR	33	159	(109)	111197
488	30.9	9.3	1.5	chr1	60093240	60093436	(188862986)	+	MIRb	SINE/MIR	7	220	(48)	115980
2908	16.2	5.2	8.7	chr1	67137091	67137812	(181818610)	C	MER77B	LTR/ERVL	(5)	695	1	128293
4145	13.5	2.0	0.1	chr1	67252021	67252671	(181703751)	C	MER57-int	LTR/ERV1	(6874)	663	1	128491
2966	9.3	2.6	2.6	chr1	67252675	67253103	(181703319)	C	MER57A1	LTR/ERV1	(3)	429	1	128491
1955	14.5	1.0	5.0	chr1	79393276	79393593	(169562829)	C	AluSx1	SINE/Alu	(7)	305	1	145831
2488	16.4	1.9	0.9	chr1	84193377	84193832	(164762590)	C	MER65C	LTR/ERV1	(0)	461	1	152174
468	23.1	4.4	0.9	chr1	84678197	84678305	(164278117)	+	L2c	LINE/L2	3270	3382	(5)	152900
2372	10.3	1.7	0.0	chr1	89385542	89385832	(159570590)	C	AluSz	SINE/Alu	(16)	296	1	159802
257	37.7	10.0	2.3	chr1	94919997	94920436	(154035986)	+	L3	LINE/CR1	1317	1794	(2305)	168503
691	19.3	12.1	1.0	chr1	94920525	94920723	(154035699)	C	MIR	SINE/MIR	(36)	226	3	168504
595	20.9	6.3	0.0	chr1	99537844	99537991	(149418431)	C	MER77B	LTR/ERVL	(17)	683	526	174969
2383	13.7	6.7	0.9	chr1	99538022	99538442	(149417980)	+	LTR44	LTR/ERV1	73	519	(0)	174970
1783	24.1	3.6	2.5	chr1	102484312	102484930	(146471492)	C	MER77	LTR/ERVL	(15)	685	1	179363
2134	14.4	3.2	1.1	chr1	102581439	102581810	(146374612)	C	THE1D	LTR/ERVL-MaLR	(0)	381	2	179478
11437	10.9	0.6	0.4	chr1	103401068	103402559	(145553863)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	86	180456
2488	23.9	5.9	1.7	chr1	104548205	104548866	(144407556)	C	MER77B	LTR/ERVL	(155)	783	1	181823
937	26.6	11.1	1.4	chr1	106123601	106124022	(142832400)	+	MLT1C	LTR/ERVL-MaLR	1	464	(3)	183684
489	27.0	6.2	0.0	chr1	108103430	108103581	(140852841)	C	LTR33A_	LTR/ERVL	(369)	162	1	186362
253	25.4	0.0	0.0	chr1	108103665	108103727	(140852695)	+	MLT1I	LTR/ERVL-MaLR	334	396	(15)	186363
798	30.3	4.6	2.1	chr1	108103745	108104081	(140852341)	+	MLT1I-int	LTR/ERVL-MaLR	2	347	(1040)	186363
4018	7.1	0.9	0.2	chr1	111003186	111003718	(137952704)	+	L1PA8	LINE/L1	5632	6168	(4)	191008
274	26.1	5.5	0.0	chr1	111003730	111003798	(137952624)	C	L1M1	LINE/L1	(7480)	85	13	191002
385	23.3	4.7	7.4	chr1	111003799	111003984	(137952438)	+	MER65D	LTR/ERV1	278	473	(0)	191009
669	29.5	2.4	5.9	chr1	111003992	111004294	(137952128)	+	MER65-int	LTR/ERV1	11	302	(4569)	191009
4409	18.8	7.9	4.9	chr1	113845501	113847581	(135108841)	C	L1MDa	LINE/L1	(3370)	3167	1001	195636
534	25.5	10.7	3.7	chr1	114454153	114454368	(134502054)	+	MER68-int	LTR/ERVL	8	240	(2750)	196604
4302	24.8	2.6	5.6	chr1	114454216	114454403	(134502019)	+	MER4B-int	LTR/ERV1	3094	3282	(3476)	196605
1565	18.8	5.0	0.7	chr1	114454404	114454690	(134501732)	+	AluJo	SINE/Alu	1	300	(12)	196606
4302	24.8	2.6	5.6	chr1	114454691	114455874	(134500548)	+	MER4B-int	LTR/ERV1	3283	4423	(2335)	196605
2141	12.9	0.0	0.3	chr1	114485994	114486279	(134470143)	+	AluSz	SINE/Alu	2	286	(26)	196668
729	25.0	6.8	6.5	chr1	114486280	114486374	(134470048)	+	L1MDa	LINE/L1	1235	1331	(5209)	196667
698	15.0	1.7	2.5	chr1	114486375	114486494	(134469928)	+	AluSp	SINE/Alu	35	153	(160)	196669
530	8.3	0.0	6.0	chr1	114486498	114486581	(134469841)	+	AluJo	SINE/Alu	234	312	(0)	196670
2032	24.2	9.4	7.1	chr1	114486585	114486805	(134469617)	+	L1MDa	LINE/L1	1356	1580	(5053)	196667
1386	17.1	5.7	0.7	chr1	114546567	114546848	(134409574)	+	MER77B	LTR/ERVL	395	691	(9)	196815
705	15.1	8.5	0.0	chr1	114546929	114547047	(134409375)	C	FLAM_C	SINE/Alu	(13)	130	1	196818
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
620	20.9	6.1	1.9	chr1	148263477	148263632	(100692790)	+	U1	snRNA	2	164	(1)	215389
1927	30.4	6.6	5.6	chr1	151742243	151742644	(97213778)	+	HERV16-int	LTR/ERVL	1175	1574	(3422)	221831
18	10.4	0.0	3.0	chr1	151742666	151742698	(97213724)	+	(AAC)n	Simple_repeat	1	33	(0)	221835
3177	21.2	9.1	1.2	chr1	151742790	151742940	(97213482)	C	L1ME1	LINE/L1	(6)	6173	6026	221836
830	22.7	3.3	2.4	chr1	151742941	151743148	(97213274)	+	MER63A	DNA/hAT-Blackjack	1	210	(0)	221837
3177	21.2	9.1	1.3	chr1	151743149	151743803	(97212619)	C	L1ME1	LINE/L1	(154)	6025	5301	221836
526	31.7	2.7	2.1	chr1	155231616	155231802	(93724620)	+	MIR3	SINE/MIR	5	192	(16)	227588
250	26.4	1.4	1.4	chr1	155232027	155232099	(93724323)	C	MIRb	SINE/MIR	(99)	169	97	227589
2178	8.1	0.0	1.8	chr1	156445463	156445784	(92510638)	C	AluSz	SINE/Alu	(0)	312	1	230147
696	19.4	1.8	16.7	chr1	157102325	157102398	(91854024)	C	MER5A1	DNA/hAT-Charlie	(92)	74	3	231278
2025	14.7	0.3	1.6	chr1	160345653	160345966	(88610456)	+	AluSz	SINE/Alu	1	310	(2)	235609
404	28.5	11.1	10.7	chr1	167256027	167256438	(81699984)	+	MLT1K	LTR/ERVL-MaLR	182	595	(0)	246427
1688	4.9	0.0	3.5	chr1	169550129	169550359	(79406063)	C	L1PA5	LINE/L1	(0)	6154	5932	250097
1991	13.7	1.6	0.9	chr1	178418103	178418419	(70538003)	C	Tigger2	DNA/TcMar-Tigger	(0)	2718	2400	263071
7079	12.8	2.3	3.0	chr1	179965926	179966976	(68989446)	C	MER57A-int	LTR/ERV1	(5132)	1055	2	265623
602	16.7	0.9	0.9	chr1	179966977	179967085	(68989337)	C	MER57B2	LTR/ERV1	(0)	403	295	265623
2282	11.2	0.3	0.0	chr1	179967414	179967709	(68988713)	C	AluSx	SINE/Alu	(14)	298	2	265625
1235	23.4	8.0	2.7	chr1	181227295	181227769	(67728653)	C	HAL1	LINE/L1	(0)	2507	2006	267683
903	31.2	4.2	1.4	chr1	181227771	181228121	(67728301)	+	MLT1J	LTR/ERVL-MaLR	1	361	(151)	267684
812	18.5	2.3	5.6	chr1	181228218	181228395	(67728027)	+	Arthur1A	DNA/hAT-Tip100	5	176	(1)	267685
2059	15.9	6.4	0.3	chr1	184638826	184639179	(64317243)	+	MLT1B	LTR/ERVL-MaLR	1	377	(13)	272961
1293	17.3	2.5	0.5	chr1	200487655	200487851	(48468571)	+	AluJb	SINE/Alu	87	287	(25)	294354
16	5.2	0.0	0.0	chr1	200487852	200487871	(48468551)	+	(GA)n	Simple_repeat	1	20	(0)	294355
28	0.0	0.0	0.0	chr1	200487873	200487899	(48468523)	+	(G)n	Simple_repeat	1	27	(0)	294356
39	2.7	0.0	0.0	chr1	200487903	200487940	(48468482)	+	(GA)n	Simple_repeat	1	38	(0)	294357
479	27.2	12.9	5.7	chr1	200487956	200488023	(48468399)	C	L2a	LINE/L2	(142)	3284	3217	294352
452	25.6	5.9	4.2	chr1	206542649	206542864	(42413558)	C	MER113A	DNA/hAT-Charlie	(6)	308	89	305267
185	10.4	9.4	7.7	chr1	206542896	206542930	(42413492)	C	L2a	LINE/L2	(4)	3422	3389	305268
1789	16.6	0.0	3.6	chr1	206542931	206543237	(42413185)	+	AluJo	SINE/Alu	2	297	(15)	305269
185	10.4	9.4	7.7	chr1	206543238	206543253	(42413169)	C	L2a	LINE/L2	(38)	3388	3370	305268
1177	25.4	11.5	6.1	chr1	210653547	210653741	(38302681)	+	L1ME4b	LINE/L1	689	882	(10)	311473
7601	19.4	4.0	7.0	chr1	211901228	211902959	(37053463)	+	MER52A	LTR/ERV1	100	1755	(0)	313587
605	26.7	6.8	0.6	chr1	212595678	212595843	(36360579)	+	MER45A	DNA/hAT-Tip100	1	177	(1)	314825
6951	23.2	2.0	3.9	chr1	214343731	214345048	(34611374)	C	MER21-int	LTR/ERVL	(2900)	1291	2	317562
2577	24.4	3.4	7.5	chr1	214345101	214345816	(34610606)	C	MER21C	LTR/ERVL	(33)	905	213	317562
2992	19.3	10.6	5.7	chr1	225613743	225614061	(23342361)	C	MER21C	LTR/ERVL	(6)	932	574	334231
2423	8.4	0.0	0.0	chr1	225614062	225614358	(23342064)	C	AluSx1	SINE/Alu	(15)	297	1	334232
22076	8.3	2.1	0.7	chr1	227551780	227556010	(21400412)	+	L1PA4	LINE/L1	2202	6465	(5)	337635
897	23.7	4.1	2.1	chr1	228057762	228057822	(20898600)	C	MER33	DNA/hAT-Charlie	(31)	293	235	338253
1516	12.6	12.8	2.2	chr1	228057823	228058100	(20898322)	C	AluSz6	SINE/Alu	(0)	312	1	338254
897	23.7	4.1	2.1	chr1	228058101	228058323	(20898099)	C	MER33	DNA/hAT-Charlie	(90)	234	3	338253
4202	13.3	2.8	0.1	chr1	228120527	228121179	(20835243)	C	MER57-int	LTR/ERV1	(6862)	675	5	338314
2958	11.8	2.1	0.0	chr1	228121184	228121606	(20834816)	C	MER57A1	LTR/ERV1	(0)	432	1	338314
1423	17.0	12.4	0.0	chr1	228312505	228312751	(20643671)	C	AluJo	SINE/Alu	(30)	282	1	338544
1903	21.1	6.3	4.1	chr1	228312793	228313302	(20643120)	C	MER21C	LTR/ERVL	(17)	921	400	338545
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
842	23.1	2.7	4.8	chr1	229824318	229824544	(19131878)	+	MER101	LTR/ERV1	253	474	(0)	340974
1026	15.8	10.4	1.6	chr1	229824546	229824738	(19131684)	+	MER101-int	LTR/ERV1	1	212	(6427)	340974
1841	15.3	1.4	0.0	chr1	232222879	232223166	(16733256)	+	7SLRNA	srpRNA	29	320	(0)	344677
2583	15.1	3.5	3.3	chr1	232223170	232223599	(16732823)	+	MER72	LTR/ERV1	292	722	(0)	344676
2065	13.5	0.0	0.7	chr1	233810490	233810778	(15145644)	C	AluSx1	SINE/Alu	(18)	294	8	346944
16	18.8	4.0	1.9	chr1	234920369	234920418	(14036004)	+	(CCACTG)n	Simple_repeat	1	52	(0)	348663
720	17.7	1.6	0.8	chr1	234920479	234920602	(14035820)	+	AluJo	SINE/Alu	3	127	(185)	348664
3840	19.9	4.2	0.9	chr1	236042692	236043470	(12912952)	+	MER21C	LTR/ERVL	3	899	(39)	350864
2563	7.4	0.0	0.0	chr1	236043517	236043827	(12912595)	+	AluYj4	SINE/Alu	1	311	(0)	350865
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
15	13.6	10.0	3.0	chr1	236796735	236796794	(12159628)	+	(TATTTAA)n	Simple_repeat	1	66	(0)	352268
2554	21.8	3.2	8.3	chr1	243994856	243995545	(4960877)	+	MER21C	LTR/ERVL	3	750	(188)	363439
339	16.2	4.2	0.0	chr1	243995558	243995625	(4960797)	C	L1MA1	LINE/L1	(165)	6137	6067	363440
572	23.3	5.9	4.2	chr1	243995626	243995791	(4960631)	+	MER21C	LTR/ERVL	748	916	(22)	363439
2105	24.5	7.5	6.2	chr1	245062647	245063542	(3892880)	C	ERV3-16A3_I-int	LTR/ERVL	(3579)	1647	740	365404
8798	3.3	24.6	0.0	chr1	248944224	248945548	(10874)	+	TAR1	Satellite/telo	314	2069	(42)	371028
676	4.0	0.7	3.4	chr1	248945549	248946422	(10000)	+	(AGGGTT)n	Simple_repeat	1	880	(0)	371029
2112	25.2	5.8	2.3	chr10	4536772	4537387	(129260035)	C	MER21-int	LTR/ERVL	(61)	4130	3492	376613
196	31.2	10.1	0.0	chr10	4537388	4537467	(129259955)	C	OldhAT1	DNA/hAT-Ac	(54)	2794	2706	376614
353	21.8	0.0	4.9	chr10	4537491	4537572	(129259850)	C	MER21-int	LTR/ERVL	(853)	3338	3261	376613
756	23.2	6.6	1.7	chr10	4537583	4537852	(129259570)	C	MER77B	LTR/ERVL	(164)	774	470	376615
727	26.7	11.7	2.1	chr10	11617200	11617478	(122179944)	+	MER46C	DNA/TcMar-Tigger	1	309	(29)	387165
739	30.0	3.4	1.6	chr10	11617533	11617789	(122179633)	+	MIR	SINE/MIR	1	262	(0)	387166
1606	19.3	4.2	0.0	chr10	11617814	11617990	(122179432)	C	AluJr	SINE/Alu	(2)	310	124	387167
626	16.9	1.7	0.8	chr10	17437023	17437140	(116360282)	+	MER65C	LTR/ERV1	321	439	(22)	397374
1772	14.2	0.7	5.1	chr10	17437174	17437469	(116359953)	C	AluJr	SINE/Alu	(27)	285	3	397377
61	0.0	0.0	0.0	chr10	17437611	17437665	(116359757)	+	(TTCC)n	Simple_repeat	1	55	(0)	397378
28	2.4	2.2	4.3	chr10	17437668	17437691	(116359731)	+	(TCTCTT)n	Simple_repeat	1	23	(0)	397379
38	4.7	0.0	0.0	chr10	17437692	17437736	(116359686)	+	(CCTTCCCTT)n	Simple_repeat	1	45	(0)	397380
28	2.4	2.2	4.3	chr10	17437737	17437759	(116359663)	+	(TCTCTT)n	Simple_repeat	5	27	(0)	397381
2061	11.3	0.0	0.0	chr10	17437764	17438028	(116359394)	C	AluSx4	SINE/Alu	(45)	265	1	397382
719	24.9	9.4	5.2	chr10	19517670	19517902	(114279520)	C	MER34B-int	LTR/ERV1	(5941)	246	3	400704
2087	15.7	5.0	0.5	chr10	19517912	19518289	(114279133)	C	MER57D	LTR/ERV1	(15)	396	1	400704
2454	21.2	9.2	1.4	chr10	28745853	28746482	(105050940)	+	MER77B	LTR/ERVL	1	684	(16)	415690
325	25.3	1.1	4.2	chr10	28746484	28746578	(105050844)	C	L2a	LINE/L2	(513)	2906	2815	415687
23	6.0	5.7	0.0	chr10	28746579	28746613	(105050809)	+	(AT)n	Simple_repeat	1	37	(0)	415691
7148	4.7	0.2	2.4	chr10	28746614	28747086	(105050336)	C	L1PA7	LINE/L1	(5)	6464	6005	415692
5692	7.1	2.6	5.5	chr10	31969059	31970051	(101827371)	+	SVA_E	Retroposon/SVA	1	862	(520)	421074
32	0.0	0.0	0.0	chr10	31970052	31970081	(101827341)	+	(G)n	Simple_repeat	1	30	(0)	421075
6496	8.0	2.8	6.2	chr10	31970082	31971613	(101825809)	+	SVA_E	Retroposon/SVA	422	1364	(18)	421074
1042	26.0	7.8	4.6	chr10	34709427	34709837	(99087585)	C	LTR33A_	LTR/ERVL	(0)	531	107	425137
285	24.4	5.9	14.2	chr10	34709874	34710078	(99087344)	+	L1M5	LINE/L1	5448	5634	(490)	425138
2512	28.5	7.8	4.4	chr10	36731003	36731555	(97065867)	C	ERV3-16A3_I-int	LTR/ERVL	(1764)	3462	2876	428481
1652	25.0	11.3	1.0	chr10	36731695	36732522	(97064900)	+	L1ME1	LINE/L1	5241	6177	(2)	428484
218	35.1	7.3	1.2	chr10	52013643	52013809	(81783613)	C	L2	LINE/L2	(467)	2952	2775	445715
1911	15.2	4.7	3.2	chr10	52014152	52014526	(81782896)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	445716
5822	18.7	3.9	3.0	chr10	56937234	56938489	(76858933)	C	HERV35I-int	LTR/ERV1	(497)	6421	5176	452094
2311	11.7	0.0	0.0	chr10	68326767	68327075	(65470347)	+	AluSc5	SINE/Alu	1	309	(0)	468959
236	25.0	4.5	11.6	chr10	68327076	68327142	(65470280)	C	MIRc	SINE/MIR	(145)	123	60	468958
13	13.6	2.9	2.9	chr10	69941037	69941070	(63856352)	+	(CTCCA)n	Simple_repeat	1	35	(0)	472512
24211	6.5	0.7	0.3	chr10	75515701	75521837	(58275585)	C	L1PA6	LINE/L1	(0)	6154	11	483227
544	25.2	7.1	2.0	chr10	75522129	75522274	(58275148)	C	MIR	SINE/MIR	(37)	225	72	483228
1539	13.9	5.4	2.8	chr10	75925661	75925911	(57871511)	C	AluSx1	SINE/Alu	(6)	306	49	483810
1981	21.4	8.0	0.4	chr10	80400093	80400553	(53396869)	C	MER77B	LTR/ERVL	(22)	678	180	491156
3458	17.0	3.0	0.6	chr10	84828328	84828997	(48968425)	+	MER77B	LTR/ERVL	1	687	(13)	497371
284	29.0	5.1	2.1	chr10	86751054	86751148	(47046274)	C	L2b	LINE/L2	(2)	3373	3276	500072
12	16.4	2.8	2.7	chr10	86775847	86775882	(47021540)	+	(GTGCATT)n	Simple_repeat	1	37	(0)	500125
1521	22.5	8.5	1.2	chr10	86776076	86776498	(47020924)	C	Charlie4a	DNA/hAT-Charlie	(51)	457	1	500126
1728	18.5	0.7	1.7	chr10	86820039	86820340	(46977082)	C	AluJb	SINE/Alu	(11)	301	3	500226
486	32.6	7.7	1.7	chr10	88300052	88300282	(45497140)	+	MIR	SINE/MIR	2	253	(15)	502652
15	10.0	0.0	0.0	chr10	88300292	88300313	(45497109)	+	(GA)n	Simple_repeat	1	22	(0)	502653
3858	16.6	12.5	3.0	chr10	94156118	94156953	(39640469)	C	MER21C	LTR/ERVL	(7)	931	5	512473
929	4.2	0.0	0.0	chr10	95176995	95177112	(38620310)	+	L1PA4	LINE/L1	6035	6152	(3)	513846
2368	7.1	0.0	0.0	chr10	100021881	100022162	(33775260)	C	AluY	SINE/Alu	(16)	295	14	522548
2300	9.9	0.0	1.6	chr10	100022163	100022302	(33775120)	C	AluSq2	SINE/Alu	(173)	140	1	522547
2065	17.3	5.5	2.6	chr10	100022303	100022322	(33775100)	+	MER57B2	LTR/ERV1	390	403	(0)	522546
3502	17.5	2.8	10.3	chr10	100022323	100022826	(33774596)	+	MER57A-int	LTR/ERV1	1	504	(5683)	522546
253	29.2	7.0	4.9	chr10	111456622	111456887	(22340535)	C	L1ME4c	LINE/L1	(147)	683	412	541147
1517	16.9	31.4	2.3	chr10	116152358	116152687	(17644735)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	548350
2175	15.3	9.7	1.8	chr10	118708913	118709311	(15088111)	C	Tigger2a	DNA/TcMar-Tigger	(0)	434	1	552463
1282	22.1	4.3	9.8	chr10	118709312	118709341	(15088081)	+	MLT1A	LTR/ERVL-MaLR	343	374	(0)	552462
184	33.0	10.9	2.3	chr10	118709355	118709521	(15087901)	C	MIRc	SINE/MIR	(52)	216	34	552464
1514	22.1	6.7	3.8	chr10	121467652	121468098	(12329324)	+	MLT1C	LTR/ERVL-MaLR	5	465	(2)	557222
1892	21.0	7.8	2.0	chr10	124013094	124013696	(9783726)	+	MER77B	LTR/ERVL	2	686	(14)	561235
235	33.5	7.2	0.0	chr10	124013850	124014043	(9783379)	+	L2	LINE/L2	2655	2863	(556)	561236
2077	27.4	6.5	2.7	chr10	125885745	125886441	(7910981)	+	L2a	LINE/L2	2614	3340	(86)	564143
209	33.7	5.2	6.7	chr10	126150299	126150492	(7646930)	+	L2b	LINE/L2	2302	2492	(927)	564491
780	22.6	7.7	4.4	chr10	127967653	127967902	(5829520)	C	L1ME3A	LINE/L1	(13)	6160	5902	566865
212	20.0	2.4	0.0	chr10	127967915	127967954	(5829468)	C	L2a	LINE/L2	(17)	3409	3369	566866
44	0.0	0.0	0.0	chr10	127968010	127968047	(5829375)	+	(GT)n	Simple_repeat	1	38	(0)	566867
632	26.3	3.4	1.2	chr10	132825575	132825832	(971590)	+	L1M5	LINE/L1	5091	5354	(792)	571967
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
616	17.1	1.7	0.0	chr11	344150	344266	(134742356)	+	HERV1_LTRe	LTR/ERV1	419	537	(0)	573297
1197	19.6	11.1	7.1	chr11	344430	344579	(134742043)	C	MER57E1	LTR/ERV1	(4)	368	206	573298
2436	7.5	0.0	2.2	chr11	344580	344897	(134741725)	+	AluY	SINE/Alu	1	311	(0)	573299
501	34.5	8.3	4.8	chr11	1588964	1589499	(133497123)	C	L1MEd	LINE/L1	(4934)	2169	1614	574787
4566	17.3	7.9	4.3	chr11	8163101	8164494	(126922128)	+	L1MB8	LINE/L1	3805	5300	(846)	583584
1957	16.6	0.0	1.9	chr11	8164495	8164807	(126921815)	+	AluJr4	SINE/Alu	2	308	(4)	583585
5534	13.3	3.5	1.4	chr11	9944563	9944824	(125141798)	+	L1PA16	LINE/L1	4395	4652	(1494)	586812
1928	16.7	0.3	0.3	chr11	9944825	9945117	(125141505)	+	AluJr	SINE/Alu	2	294	(18)	586813
5534	11.7	2.9	0.9	chr11	9945118	9946312	(125140310)	+	L1PA16	LINE/L1	4653	5874	(292)	586812
3754	21.9	6.5	2.6	chr11	16625346	16626212	(118460410)	+	MER21C	LTR/ERVL	9	911	(27)	597252
1933	24.1	5.8	1.4	chr11	16626260	16626839	(118459783)	C	L1ME2	LINE/L1	(1195)	4951	4345	597250
2443	15.9	0.7	2.9	chr11	27999060	27999513	(107087109)	+	MER65A	LTR/ERV1	1	444	(1)	614925
543	26.8	2.0	9.1	chr11	27999598	27999917	(107086705)	+	MER65-int	LTR/ERV1	82	378	(4493)	614925
1262	18.3	19.8	1.2	chr11	33610744	33611064	(101475558)	C	MSTD	LTR/ERVL-MaLR	(0)	396	2	623797
239	32.5	10.3	2.4	chr11	34789862	34790066	(100296556)	+	L2a	LINE/L2	2654	2876	(543)	625815
783	30.2	10.1	6.1	chr11	34790231	34790345	(100296277)	+	MLT1H1	LTR/ERVL-MaLR	55	167	(388)	625816
4058	14.5	2.4	0.1	chr11	35709155	35709815	(99376807)	C	MER57-int	LTR/ERV1	(6860)	677	2	627196
2976	10.8	0.9	0.5	chr11	35709817	35710243	(99376379)	C	MER57A1	LTR/ERV1	(0)	432	4	627196
395	23.7	11.2	10.7	chr11	44411429	44411687	(90674935)	C	MIRb	SINE/MIR	(0)	268	29	640063
769	29.6	9.1	2.2	chr11	44412140	44412505	(90674117)	C	MLT1L	LTR/ERVL-MaLR	(0)	610	217	640064
2124	9.5	3.2	1.0	chr11	61391207	61391252	(73695370)	+	AluSq2	SINE/Alu	1	47	(266)	660081
32	0.0	0.0	0.0	chr11	61391253	61391282	(73695340)	+	(G)n	Simple_repeat	1	30	(0)	660082
2124	9.5	3.2	1.0	chr11	61391283	61391540	(73695082)	+	AluSq2	SINE/Alu	48	311	(2)	660081
1848	13.4	2.8	22.0	chr11	69365361	69365897	(65720725)	C	Tigger2a	DNA/TcMar-Tigger	(3)	431	1	674967
1079	29.6	4.4	3.7	chr11	69365898	69366286	(65720336)	+	L1MEd	LINE/L1	3056	3444	(2875)	674959
1069	23.6	13.1	5.9	chr11	70371122	70371431	(64715191)	C	L1MD	LINE/L1	(3227)	2919	2548	676745
616	22.2	3.5	4.0	chr11	70371541	70371742	(64714880)	C	L1M4	LINE/L1	(3463)	2683	2483	676741
2474	20.1	10.6	2.3	chr11	73092809	73093462	(61993160)	+	MER77B	LTR/ERVL	1	728	(203)	681167
260	23.7	1.7	0.0	chr11	73093443	73093501	(61993121)	+	MER77B	LTR/ERVL	596	655	(45)	681167
2204	13.9	8.9	0.8	chr11	74192544	74192934	(60893688)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	683612
4820	11.3	1.3	2.7	chr11	74192935	74193547	(60893075)	+	Tigger4	DNA/TcMar-Tigger	2129	2729	(2)	683611
3132	11.3	0.0	0.5	chr11	77640787	77641220	(57445402)	+	MER57A1	LTR/ERV1	1	432	(0)	690313
4861	14.2	0.4	2.2	chr11	77641221	77641404	(57445218)	+	MER41-int	LTR/ERV1	1	184	(7353)	690313
2201	10.4	1.3	0.7	chr11	77641405	77641701	(57444921)	C	AluSp	SINE/Alu	(14)	299	1	690314
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
4080	13.1	5.9	0.3	chr11	95614529	95615163	(39471459)	C	MER57-int	LTR/ERV1	(6862)	675	3	718916
2939	12.2	0.7	0.5	chr11	95615170	95615596	(39471026)	C	MER57A1	LTR/ERV1	(4)	428	1	718916
1885	17.1	4.3	3.6	chr11	96270759	96271305	(38815317)	+	MLT2A2	LTR/ERVL	1	554	(0)	719893
505	12.0	3.2	0.0	chr11	96271325	96271416	(38815206)	+	THE1C-int	LTR/ERVL-MaLR	1537	1631	(0)	719894
2765	8.7	1.6	0.5	chr11	96271417	96271787	(38814835)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	719894
2241	11.2	0.0	0.3	chr11	110522851	110523153	(24563469)	C	AluSx	SINE/Alu	(9)	303	2	739981
1250	28.4	14.7	7.8	chr11	114995584	114996607	(20090015)	+	L2a	LINE/L2	2140	3255	(171)	747027
4004	12.7	0.7	4.5	chr11	117849671	117850314	(17236308)	+	LTR31	LTR/ERV1	1	619	(0)	751852
1749	8.1	0.0	0.0	chr11	119555434	119555655	(15530967)	+	AluSx1	SINE/Alu	1	222	(90)	755069
263	31.4	9.5	0.0	chr11	119555787	119555891	(15530731)	+	MIR	SINE/MIR	35	150	(112)	755070
4859	14.9	3.9	1.2	chr11	121355381	121356184	(13730438)	+	MER21B	LTR/ERVL	1	826	(42)	757980
1288	19.2	13.9	1.1	chr11	124934340	124934755	(10151867)	+	MLT1C	LTR/ERVL-MaLR	10	505	(0)	763778
3627	11.6	7.3	0.8	chr11	125542655	125543347	(9543275)	+	MER4B-int	LTR/ERV1	1968	2694	(4064)	764712
2423	13.9	1.5	4.8	chr11	125543348	125543762	(9542860)	+	MER57B1	LTR/ERV1	1	401	(0)	764715
12910	16.4	3.0	4.0	chr11	125543763	125544263	(9542359)	+	MER57-int	LTR/ERV1	1	510	(7027)	764715
1931	15.5	0.0	1.0	chr11	125544264	125544283	(9542339)	C	AluSz6	SINE/Alu	(9)	303	285	764716
32	0.0	0.0	5.1	chr11	125544284	125544322	(9542300)	+	(TTGTT)n	Simple_repeat	1	39	(0)	764717
2682	14.6	5.0	0.4	chr11	130340612	130341065	(4745557)	C	LTR06	LTR/ERV1	(0)	476	1	771742
364	22.1	8.7	3.8	chr12	582018	582161	(132693148)	C	MIRb	SINE/MIR	(59)	149	15	779008
192	28.8	11.9	0.0	chr12	582190	582248	(132693061)	+	L2b	LINE/L2	3309	3375	(0)	779009
356	32.0	4.9	8.3	chr12	2768157	2768397	(130506912)	+	L2c	LINE/L2	3071	3307	(80)	782615
200	13.2	2.6	2.6	chr12	2768385	2768423	(130506886)	+	L2c	LINE/L2	3269	3307	(80)	782616
189	15.8	2.6	2.6	chr12	2768432	2768470	(130506839)	+	L2c	LINE/L2	3269	3307	(80)	782616
270	25.4	2.6	10.2	chr12	2768479	2768605	(130506704)	+	L2c	LINE/L2	3269	3385	(2)	782617
359	25.8	0.0	1.1	chr12	5641486	5641579	(127633730)	C	MER94	DNA/hAT-Blackjack	(7)	127	35	787322
956	19.7	3.2	2.0	chr12	7235218	7235493	(126039816)	+	L1MA9	LINE/L1	5943	6209	(125)	790130
3559	17.9	3.1	4.2	chr12	7235576	7236484	(126038825)	+	L1M4	LINE/L1	3500	4398	(1748)	790132
3343	21.5	2.9	5.9	chr12	7580996	7581880	(125693429)	+	MER21B	LTR/ERVL	1	858	(10)	790529
281	10.9	2.1	0.0	chr12	7581912	7581957	(125693352)	+	MER21-int	LTR/ERVL	2	48	(2942)	790529
2340	23.8	8.2	3.0	chr12	7581979	7582318	(125692991)	+	MER21-int	LTR/ERVL	163	1008	(3183)	790529
1884	11.0	2.4	5.8	chr12	8686104	8686250	(124589059)	C	AluSz	SINE/Alu	(175)	137	5	792716
20	12.6	0.0	0.0	chr12	8686255	8686290	(124589019)	+	(CCCCT)n	Simple_repeat	1	36	(0)	792718
830	18.2	9.7	0.0	chr12	8686292	8686450	(124588859)	C	AluSc8	SINE/Alu	(9)	302	127	792719
2507	5.3	0.0	3.1	chr12	8686461	8686781	(124588528)	C	AluY	SINE/Alu	(0)	311	1	792720
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
237	37.0	2.8	1.4	chr12	17097913	17098052	(116177257)	C	MLT1J-int	LTR/ERVL-MaLR	(876)	511	370	805100
1866	24.4	0.2	1.8	chr12	18157319	18157757	(115117552)	+	MER57A1	LTR/ERV1	1	432	(0)	806298
655	28.9	1.8	0.7	chr12	18157762	18158022	(115117287)	+	MER57A-int	LTR/ERV1	3	296	(5891)	806298
216	36.0	1.0	2.0	chr12	23055282	23055383	(110219926)	C	L2c	LINE/L2	(315)	3072	2972	813097
244	36.0	6.3	6.3	chr12	23337551	23337725	(109937584)	+	LTR88c	LTR/Gypsy?	677	851	(11)	813461
1123	29.0	10.8	4.8	chr12	24672282	24672723	(108602586)	+	L1M5	LINE/L1	4105	4549	(1597)	815231
1606	20.1	0.4	0.4	chr12	24672724	24672986	(108602323)	C	AluJr4	SINE/Alu	(49)	263	1	815232
1123	29.0	10.8	4.8	chr12	24672987	24673391	(108601918)	+	L1M5	LINE/L1	4550	5009	(1137)	815231
1063	25.2	9.3	5.6	chr12	25110275	25110935	(108164374)	+	L2a	LINE/L2	2727	3417	(9)	815978
372	30.9	12.4	8.6	chr12	26352012	26352535	(106922774)	+	MLT1N2	LTR/ERVL-MaLR	4	550	(12)	817845
18	21.0	0.0	0.0	chr12	30418505	30418539	(102856770)	+	(T)n	Simple_repeat	1	35	(0)	823674
1927	15.7	2.0	0.7	chr12	31915282	31915580	(101359729)	C	AluJb	SINE/Alu	(8)	304	2	826356
267	30.0	3.7	3.7	chr12	31915648	31915782	(101359527)	+	MER57-int	LTR/ERV1	3	137	(7400)	826357
2580	6.3	0.0	0.0	chr12	31972325	31972625	(101302684)	+	AluY	SINE/Alu	1	301	(10)	826489
2693	19.2	5.8	3.8	chr12	31972626	31972797	(101302512)	+	MER21B	LTR/ERVL	648	807	(61)	826487
381	19.3	5.4	2.8	chr12	31972839	31973019	(101302290)	C	L1M4b	LINE/L1	(3742)	3125	2940	826484
12	17.4	0.0	5.6	chr12	32368076	32368111	(100907198)	+	(TTTTA)n	Simple_repeat	1	36	(0)	827345
1999	12.4	2.5	1.6	chr12	45220624	45220935	(88054374)	+	MER21B	LTR/ERVL	1	315	(553)	840519
1593	20.4	3.1	3.4	chr12	45220935	45221289	(88054020)	+	MER21B	LTR/ERVL	513	866	(2)	840519
1953	13.8	0.0	6.1	chr12	56201381	56201692	(77073617)	+	AluJb	SINE/Alu	4	296	(16)	859075
251	27.6	7.3	7.7	chr12	56201693	56201829	(77073480)	+	L1MC5a	LINE/L1	2434	2573	(204)	859073
2951	12.1	0.7	0.5	chr12	57657342	57657772	(75617537)	+	MER57A1	LTR/ERV1	1	432	(0)	861633
4262	13.4	2.5	0.1	chr12	57657773	57658428	(75616881)	+	MER57-int	LTR/ERV1	1	672	(6865)	861633
369	29.2	11.1	10.1	chr12	64935929	64936107	(68339202)	+	MamGypLTR3a	LTR/Gypsy	291	471	(510)	872021
2840	12.4	1.0	0.0	chr12	68982958	68983353	(64291956)	+	MER57B1	LTR/ERV1	2	401	(0)	878475
8789	11.6	2.7	1.2	chr12	68983354	68984611	(64290698)	+	MER57-int	LTR/ERV1	1	1278	(6259)	878475
713	22.8	1.6	13.6	chr12	71494836	71495114	(61780195)	C	MER57A-int	LTR/ERV1	(5940)	247	3	882379
1384	26.1	1.9	8.1	chr12	71495120	71495577	(61779732)	C	MER57F	LTR/ERV1	(6)	429	1	882379
846	22.6	19.7	4.3	chr12	82055090	82055455	(51219854)	C	MLT1F1	LTR/ERVL-MaLR	(4)	565	122	897232
246	21.7	9.2	4.2	chr12	82055520	82055591	(51219718)	C	MLT1F1	LTR/ERVL-MaLR	(424)	124	49	897232
2010	17.5	4.9	0.0	chr12	86152188	86152575	(47122734)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	902568
19	0.0	0.0	0.0	chr12	93592918	93592938	(39682371)	+	(T)n	Simple_repeat	1	21	(0)	913774
10621	15.1	3.6	3.8	chr12	94359314	94361222	(38914087)	+	L1MA5	LINE/L1	4579	6523	(1039)	915073
927	18.3	8.6	1.8	chr12	105003419	105003646	(28271663)	C	MER57A-int	LTR/ERV1	(5940)	247	3	933646
1873	17.9	2.5	2.0	chr12	105003661	105004060	(28271249)	C	MER57D	LTR/ERV1	(9)	402	1	933646
9830	15.2	2.3	0.2	chr12	106257628	106259141	(27016168)	+	L1MA2	LINE/L1	16	1535	(6030)	935921
12047	10.8	4.9	3.2	chr12	106259114	106259517	(27015792)	+	L1MA2	LINE/L1	1660	2074	(5491)	935921
1636	23.9	6.4	0.7	chr12	111280504	111280933	(21994376)	C	MLT1C	LTR/ERVL-MaLR	(6)	461	6	946698
382	28.9	12.6	0.6	chr12	111280968	111281141	(21994168)	+	L2c	LINE/L2	2643	2840	(579)	946699
225	33.5	14.0	4.1	chr12	111281186	111281602	(21993707)	+	L2c	LINE/L2	2918	3382	(5)	946699
1092	24.5	1.6	12.0	chr12	115848368	115848692	(17426617)	C	L1MC5a	LINE/L1	(4)	2773	2474	956915
1980	13.6	2.6	2.0	chr12	115848693	115848994	(17426315)	C	AluSx1	SINE/Alu	(8)	304	1	956916
14	33.8	1.4	1.4	chr12	119017513	119017584	(14257725)	+	GA-rich	Low_complexity	1	73	(0)	963824
408	29.6	6.6	0.0	chr12	123479121	123479284	(9796025)	+	MIRc	SINE/MIR	38	215	(53)	974201
1989	23.7	7.9	1.4	chr12	126287615	126288251	(6987058)	C	MER77B	LTR/ERVL	(17)	683	2	979585
2320	11.7	6.0	3.9	chr12	129516336	129516691	(3758618)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	985177
1522	21.7	14.1	1.2	chr12	129516722	129517141	(3758168)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	23	985178
184	37.4	7.4	2.3	chr12	131507556	131507900	(1767409)	+	L2	LINE/L2	2030	2393	(1026)	988211
2224	19.9	6.1	0.7	chr12	131708818	131709263	(1566046)	C	MER70A	LTR/ERVL	(0)	472	1	988481
460	27.6	5.3	10.8	chr12	131709264	131709352	(1565957)	C	MER57A-int	LTR/ERV1	(6111)	76	3	988480
965	13.6	5.0	0.6	chr12	131709357	131709526	(1565783)	C	MER57D	LTR/ERV1	(0)	411	234	988480
239	24.4	6.8	3.5	chr12	131709517	131709601	(1565708)	C	MER57D	LTR/ERV1	(284)	88	1	988480
336	31.9	16.6	3.5	chr12	131709798	131710145	(1565164)	C	L2a	LINE/L2	(6)	3420	3018	988482
2123	11.2	1.8	0.0	chr12	131813103	131813380	(1461929)	+	AluSq	SINE/Alu	2	284	(29)	988619
1392	16.1	2.6	10.0	chr12	131813381	131813402	(1461907)	+	MER65A	LTR/ERV1	409	424	(21)	988617
1370	28.7	8.7	5.0	chr12	131813526	131813708	(1461601)	+	MER65-int	LTR/ERV1	115	323	(4548)	988620
2223	11.4	0.0	0.3	chr12	132616474	132616770	(658539)	+	AluSx	SINE/Alu	1	296	(16)	989677
783	20.4	15.0	1.6	chr12	132616771	132616943	(658366)	C	MER57A-int	LTR/ERV1	(5993)	194	4	989676
1574	19.4	10.8	4.2	chr12	132616947	132616986	(658323)	C	MER57C2	LTR/ERV1	(0)	434	402	989676
51	0.0	0.0	0.0	chr12	132616987	132617030	(658279)	+	(TG)n	Simple_repeat	1	44	(0)	989678
887	18.5	2.1	2.6	chr13	20584809	20584997	(93779331)	+	MER20	DNA/hAT-Charlie	1	188	(31)	994521
1556	22.3	6.5	3.7	chr13	20585176	20585794	(93778534)	C	MER77B	LTR/ERVL	(15)	685	1	994522
708	12.3	0.0	0.0	chr13	21289281	21289386	(93074942)	+	MLT2B3	LTR/ERVL	1	106	(448)	995860
1699	24.4	3.3	4.9	chr13	33939368	33939854	(80424474)	+	MER21C	LTR/ERVL	400	878	(60)	1015074
1164	28.2	4.7	3.6	chr13	33939862	33940565	(80423763)	C	L1ME3A	LINE/L1	(2783)	3363	2613	1015073
2887	21.0	11.0	3.3	chr13	40928784	40929626	(73434702)	+	MER21C	LTR/ERVL	7	922	(16)	1024932
360	26.3	3.1	0.0	chr13	40929669	40929763	(73434565)	+	L2a	LINE/L2	3328	3425	(1)	1024933
274	35.3	2.9	0.8	chr13	44162803	44162936	(70201392)	+	MIRc	SINE/MIR	107	243	(25)	1029869
5481	15.9	10.7	0.3	chr13	61902819	61903829	(52460499)	+	LTR28C	LTR/ERV1	1	1129	(0)	1055341
7101	5.4	1.3	0.0	chr13	68327340	68328835	(46035493)	C	L1PA5	LINE/L1	(1)	6153	4641	1063400
781	26.1	2.5	3.9	chr13	68328837	68329043	(46035285)	+	MER20	DNA/hAT-Charlie	4	207	(12)	1063401
3315	16.7	4.3	3.7	chr13	69168122	69168742	(45195586)	+	LTR1D1	LTR/ERV1	209	833	(66)	1064454
2330	17.0	2.4	9.2	chr13	69760655	69760928	(44603400)	C	MER57A-int	LTR/ERV1	(5366)	821	559	1065211
786	20.4	0.6	5.4	chr13	69760926	69761091	(44603237)	C	MER57A-int	LTR/ERV1	(6029)	158	1	1065211
2128	18.6	1.8	0.5	chr13	69761092	69761481	(44602847)	C	MER57B2	LTR/ERV1	(0)	403	9	1065211
2331	27.1	6.3	3.0	chr13	70572329	70572759	(43791569)	C	L1MEf	LINE/L1	(1300)	4846	4389	1066312
1461	18.6	6.8	1.8	chr13	70572760	70573038	(43791290)	C	AluJb	SINE/Alu	(18)	294	1	1066313
2331	27.1	6.3	3.0	chr13	70573039	70573633	(43790695)	C	L1MEf	LINE/L1	(1758)	4388	3784	1066312
1154	22.6	6.3	0.3	chr13	75506782	75507065	(38857263)	+	L1MC4	LINE/L1	7407	7708	(334)	1073455
4542	20.5	16.5	5.7	chr13	75507066	75508540	(38855788)	C	MER52D	LTR/ERV1	(0)	2123	1	1073456
299	17.5	1.9	0.2	chr13	78412359	78412432	(35951896)	+	L1MA4	LINE/L1	6222	6300	(0)	1077495
3234	17.9	4.4	3.6	chr13	78412596	78413289	(35951039)	C	MER21B	LTR/ERVL	(19)	849	169	1077496
41	0.0	0.0	0.0	chr13	86643500	86643534	(27720794)	+	(AC)n	Simple_repeat	1	35	(0)	1088006
2120	33.9	4.7	4.3	chr13	86643535	86643854	(27720474)	C	HERVL40-int	LTR/ERVL	(4033)	1497	1177	1088005
2228	10.0	5.5	0.8	chr13	86643855	86644217	(27720111)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1088007
414	30.7	5.9	5.6	chr13	88094747	88094998	(26269330)	+	HAL1b	LINE/L1	1752	2004	(417)	1089882
618	21.3	0.8	1.6	chr13	88095000	88095126	(26269202)	C	AluJb	SINE/Alu	(11)	301	176	1089883
1218	18.2	9.9	4.8	chr13	99019424	99019775	(15344553)	+	LTR52	LTR/ERVL	47	418	(3)	1105567
2693	9.6	0.6	0.0	chr13	114172732	114173084	(191244)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	1125309
2259	11.9	3.3	6.9	chr13	114173085	114173193	(191135)	C	MER57-int	LTR/ERV1	(7089)	448	340	1125306
2755	13.6	1.4	0.7	chr13	114173215	114173643	(190685)	C	MER57A1	LTR/ERV1	(0)	432	1	1125306
184	30.6	4.6	0.0	chr14	18668138	18668199	(88375519)	+	L2b	LINE/L2	3309	3373	(2)	1126017
2507	6.4	0.0	0.3	chr14	22792920	22793216	(84250502)	C	AluY	SINE/Alu	(15)	296	1	1131715
4995	7.3	1.6	1.9	chr14	22793287	22793529	(84250189)	+	LTR8	LTR/ERV1	12	261	(430)	1131716
396	28.0	1.7	0.0	chr14	50788362	50788479	(56255239)	+	Chap1_Mam	DNA/hAT-Charlie	128	247	(95)	1170477
787	29.7	9.2	4.1	chr14	51903928	51904369	(55139349)	C	MLT1N2	LTR/ERVL-MaLR	(0)	562	96	1172163
521	28.7	4.4	1.8	chr14	52176894	52177113	(54866605)	+	MLT1N2	LTR/ERVL-MaLR	308	533	(29)	1172547
2806	19.8	6.7	1.2	chr14	61240097	61240698	(45803020)	C	LTR9B	LTR/ERV1	(0)	644	7	1186214
492	25.8	3.9	0.8	chr14	61240705	61240829	(45802889)	C	MER21-int	LTR/ERVL	(4061)	130	2	1186203
4172	15.3	11.2	1.4	chr14	61240844	61241620	(45802098)	C	MER21B	LTR/ERVL	(5)	863	1	1186203
1775	16.4	0.0	0.7	chr14	67723260	67723534	(39320184)	C	AluJo	SINE/Alu	(39)	273	1	1196626
233	17.0	2.1	4.1	chr14	67723589	67723637	(39320081)	+	tRNA-Leu-TTG	tRNA	39	86	(0)	1196627
357	28.1	7.3	0.0	chr14	67723650	67723788	(39319930)	+	MIRb	SINE/MIR	113	262	(6)	1196628
335	32.6	2.6	0.0	chr14	72427645	72427791	(34615927)	+	L2	LINE/L2	709	859	(2560)	1204280
241	25.5	9.6	5.0	chr14	72494902	72495099	(34548619)	+	L1ME4c	LINE/L1	621	828	(2)	1204375
1908	19.4	6.7	4.2	chr14	72507189	72507470	(34536248)	+	MLT1C	LTR/ERVL-MaLR	185	467	(0)	1204399
958	30.5	7.1	12.7	chr14	74231686	74232088	(32811630)	C	MLT1N2	LTR/ERVL-MaLR	(92)	470	91	1208071
2323	10.2	0.0	0.0	chr14	74232089	74232382	(32811336)	+	AluSg	SINE/Alu	1	294	(16)	1208073
135	1.6	0.8	0.0	chr14	77269669	77269795	(29773923)	+	(TC)n	Simple_repeat	1	128	(0)	1213918
25	0.0	0.0	0.0	chr14	77269796	77269822	(29773896)	+	(C)n	Simple_repeat	1	27	(0)	1213919
529	28.8	2.5	2.5	chr14	77269823	77269979	(29773739)	C	MIR	SINE/MIR	(43)	219	63	1213920
2693	16.0	0.2	2.2	chr14	88222995	88223448	(18820270)	+	MER65A	LTR/ERV1	1	445	(0)	1230097
1367	21.8	10.2	5.9	chr14	88223450	88223888	(18819830)	+	MER65-int	LTR/ERV1	6	465	(4406)	1230097
561	36.5	2.8	2.1	chr14	98063005	98063287	(8980431)	+	MER115	DNA/hAT-Tip100	1	285	(408)	1247738
933	19.9	0.0	0.0	chr14	104008771	104008931	(3034787)	+	AluJb	SINE/Alu	140	300	(12)	1257970
1759	16.5	0.0	0.4	chr14	104008964	104009243	(3034475)	C	Tigger3b	DNA/TcMar-Tigger	(0)	1231	953	1257971
2144	15.8	3.5	1.3	chr15	33043208	33043599	(68947590)	+	MER57B1	LTR/ERV1	1	401	(0)	1280763
2877	15.4	2.6	1.8	chr15	33043600	33043661	(68947528)	+	MER41-int	LTR/ERV1	1	75	(7462)	1280763
8151	18.6	6.3	8.5	chr15	33043662	33045457	(68945732)	+	MER52A	LTR/ERV1	1	1753	(2)	1280764
88	16.9	1.1	2.1	chr15	43297479	43297650	(58693539)	+	GA-rich	Low_complexity	14	185	(0)	1296731
353	28.7	22.6	1.6	chr15	43297988	43298178	(58693011)	C	MIR	SINE/MIR	(4)	258	16	1296732
2459	9.9	0.0	0.0	chr15	55864916	55865218	(46125971)	+	AluSx1	SINE/Alu	1	303	(9)	1316346
300	33.9	5.2	4.0	chr15	55865278	55865504	(46125685)	+	L1M5	LINE/L1	4915	5144	(1002)	1316344
250	31.1	7.3	2.8	chr15	57391015	57391181	(44600008)	C	MIRc	SINE/MIR	(79)	189	5	1318629
545	31.8	8.4	1.2	chr15	61421094	61421335	(40569854)	C	MIRc	SINE/MIR	(2)	266	6	1325291
260	31.0	2.3	1.2	chr15	64020830	64020914	(37970275)	+	MIRc	SINE/MIR	9	94	(174)	1329583
271	31.9	3.1	0.0	chr15	64020908	64021001	(37970188)	C	MIR3	SINE/MIR	(85)	123	27	1329584
3004	23.3	15.9	12.1	chr15	65013414	65013661	(36977528)	C	L1MB7	LINE/L1	(2104)	4042	3796	1331704
2039	15.1	1.0	0.6	chr15	65013662	65013972	(36977217)	+	AluSz	SINE/Alu	1	312	(0)	1331710
3004	23.3	15.9	12.1	chr15	65013973	65014113	(36977076)	C	L1MB7	LINE/L1	(2351)	3795	3673	1331704
258	22.0	0.0	7.8	chr15	65283767	65283830	(36707359)	+	L2c	LINE/L2	3328	3386	(1)	1332290
888	24.8	2.1	2.9	chr15	65284142	65284325	(36706864)	C	L1M5	LINE/L1	(2264)	3882	3701	1332291
819	30.3	2.4	0.8	chr15	65975565	65975810	(36015379)	+	MIRb	SINE/MIR	11	260	(8)	1333729
2137	15.8	2.4	2.4	chr15	65976011	65976040	(36015149)	+	MLT1B	LTR/ERVL-MaLR	5	33	(357)	1333730
2329	8.3	0.7	0.0	chr15	65976041	65976340	(36014849)	C	AluSx	SINE/Alu	(10)	302	1	1333731
194	25.0	25.7	0.0	chr15	68438575	68438710	(33552479)	C	L2b	LINE/L2	(151)	3236	3054	1338334
19	7.0	8.3	1.9	chr15	68439012	68439022	(33552167)	+	(GCAT)n	Simple_repeat	1	11	(0)	1338343
49	0.0	0.0	0.0	chr15	68439023	68439064	(33552125)	+	(AC)n	Simple_repeat	1	42	(0)	1338344
19	7.0	8.3	1.9	chr15	68439065	68439100	(33552089)	+	(GCAT)n	Simple_repeat	4	42	(0)	1338345
197	32.9	12.1	2.8	chr15	68501648	68501863	(33489326)	+	L2b	LINE/L2	2946	3184	(191)	1338464
839	25.5	10.7	2.9	chr15	68502072	68502313	(33488876)	C	MIR	SINE/MIR	(1)	267	5	1338465
2222	19.1	6.5	2.7	chr15	71403528	71403974	(30587215)	+	LTR40c	LTR/ERVL	1	465	(0)	1343678
1795	25.0	12.1	5.4	chr15	71403975	71404045	(30587144)	C	HAL1	LINE/L1	(1141)	1366	1274	1343675
3112	18.7	3.5	0.8	chr15	71404081	71404540	(30586649)	C	L1MB7	LINE/L1	(0)	6184	5704	1343679
439	24.2	13.4	11.5	chr15	75816594	75816652	(26174537)	+	MIR3	SINE/MIR	161	205	(3)	1351562
259	29.0	7.8	0.9	chr15	77837636	77837743	(24153446)	C	L2b	LINE/L2	(35)	3340	3225	1354764
740	22.7	1.1	1.7	chr15	78674005	78674183	(23317006)	C	MER5B	DNA/hAT-Charlie	(0)	178	1	1356391
2673	14.5	1.2	2.5	chr15	79230748	79231179	(22760010)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	1357498
7747	20.5	8.2	8.1	chr15	81126169	81127721	(20863468)	C	MER65-int	LTR/ERV1	(3171)	1700	85	1360752
2754	13.3	3.6	1.6	chr15	81127807	81128242	(20862947)	C	MER65A	LTR/ERV1	(0)	445	1	1360752
274	32.9	12.1	1.4	chr15	87299965	87300112	(14691077)	+	MIRb	SINE/MIR	96	261	(7)	1370614
2700	18.9	5.5	4.5	chr15	87300151	87300822	(14690367)	C	MER77B	LTR/ERVL	(21)	679	1	1370615
4603	15.1	1.3	2.9	chr15	92698379	92699164	(9292025)	C	MER57A-int	LTR/ERV1	(5414)	773	1	1380252
3905	6.2	7.2	0.0	chr15	92699181	92699695	(9291494)	C	L1P2	LINE/L1	(5115)	1069	515	1380255
503	32.1	8.9	4.1	chr15	93397585	93398000	(8593189)	+	L1MB4	LINE/L1	7	444	(6163)	1381593
1003	10.3	0.0	9.8	chr15	93398043	93398134	(8593055)	C	AluSq10	SINE/Alu	(151)	162	81	1381594
1881	13.6	6.4	0.0	chr15	101195967	101196246	(794943)	+	AluSx1	SINE/Alu	1	299	(13)	1392462
280	30.6	18.1	5.1	chr15	101264252	101264585	(726604)	+	ERVL-E-int	LTR/ERVL	399	785	(4882)	1392558
358	16.1	12.9	0.0	chr15	101264953	101265033	(726156)	C	LTR33	LTR/ERVL	(421)	94	2	1392559
293	19.4	4.0	0.0	chr16	1025186	1025257	(89313088)	C	MER2	DNA/TcMar-Tigger	(3)	342	268	1395420
2071	13.3	0.7	2.6	chr16	4105390	4105698	(86232647)	+	AluSz6	SINE/Alu	1	303	(9)	1400449
1183	17.4	0.9	2.3	chr16	4105699	4105864	(86232481)	+	AluJr	SINE/Alu	134	301	(11)	1400448
4092	20.5	4.1	3.2	chr16	9387200	9388096	(80950249)	+	MER21C	LTR/ERVL	8	912	(26)	1411253
210	34.7	9.6	0.0	chr16	9388118	9388267	(80950078)	+	L2b	LINE/L2	3019	3184	(191)	1411254
1230	18.0	2.0	1.2	chr16	10561936	10562188	(79776157)	+	L1M5	LINE/L1	3502	3756	(2390)	1413716
1837	20.6	9.5	1.8	chr16	10562189	10562336	(79776009)	+	MLT1H	LTR/ERVL-MaLR	77	235	(314)	1413717
66	5.4	0.0	0.0	chr16	10562337	10562413	(79775932)	+	(TCTCTC)n	Simple_repeat	1	77	(0)	1413718
1837	20.6	9.5	1.8	chr16	10562414	10562700	(79775645)	+	MLT1H	LTR/ERVL-MaLR	236	548	(1)	1413717
1701	14.6	4.2	2.9	chr16	11617886	11618166	(78720179)	C	AluJo	SINE/Alu	(27)	285	1	1416115
1302	15.7	1.5	7.4	chr16	11618167	11618322	(78720023)	C	MER21-int	LTR/ERVL	(290)	3901	3748	1416110
691	24.9	4.2	5.5	chr16	11618326	11618542	(78719803)	+	MER21C	LTR/ERVL	649	862	(76)	1416116
2407	9.3	0.0	0.0	chr16	11618703	11619012	(78719333)	+	AluSg	SINE/Alu	1	310	(0)	1416117
3614	14.8	5.9	0.9	chr16	14600973	14601628	(75736717)	+	L1MB3	LINE/L1	5490	6180	(3)	1422465
2055	10.8	6.1	0.0	chr16	14601641	14601919	(75736426)	+	AluSx	SINE/Alu	1	297	(15)	1422466
1523	17.0	2.2	1.5	chr16	15978102	15978407	(74359938)	+	AluJr	SINE/Alu	15	312	(0)	1425752
799	24.0	8.7	0.0	chr16	15978745	15978944	(74359401)	+	MER20	DNA/hAT-Charlie	1	219	(0)	1425753
2156	11.5	0.0	0.0	chr16	15979011	15979323	(74359022)	+	AluSc	SINE/Alu	1	309	(0)	1425754
18	0.0	0.0	0.0	chr16	19201672	19201691	(71136654)	+	(A)n	Simple_repeat	1	20	(0)	1432963
213	36.4	0.0	4.9	chr16	19201716	19201796	(71136549)	+	MIR	SINE/MIR	1	77	(185)	1432964
293	33.3	6.2	2.2	chr16	19201800	19201937	(71136408)	C	L2a	LINE/L2	(1)	3425	3282	1432965
3250	20.1	6.3	2.4	chr16	19202018	19202724	(71135621)	C	MER21B	LTR/ERVL	(61)	807	69	1432966
313	31.9	7.5	5.1	chr16	26181756	26181950	(64156395)	+	MIRb	SINE/MIR	46	245	(23)	1448517
906	23.1	0.5	0.0	chr16	27447211	27447396	(62890949)	C	MIR	SINE/MIR	(7)	255	69	1451177
374	22.9	9.3	1.4	chr16	27447664	27447787	(62890558)	C	L2a	LINE/L2	(0)	3426	3266	1451178
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
888	6.7	4.2	0.7	chr16	33340034	33340155	(56998190)	C	LTR13A	LTR/ERVK	(840)	126	1	1462584
316	25.0	0.0	0.0	chr16	34062726	34062789	(56275556)	+	AluYa8	SINE/Alu	223	286	(24)	1463558
390	15.6	3.0	0.0	chr16	34062893	34062956	(56275389)	+	AluYj4	SINE/Alu	224	289	(22)	1463559
330	24.4	1.2	2.4	chr16	34071698	34071779	(56266566)	+	AluJb	SINE/Alu	208	288	(24)	1463578
376	15.6	3.0	0.0	chr16	34097527	34097590	(56240755)	C	AluJo	SINE/Alu	(22)	290	225	1463604
9332	21.4	0.2	1.5	chr16	35737871	35739740	(54598605)	C	HERVH-int	LTR/ERV1	(156)	7557	5713	1465076
11392	18.8	1.8	3.7	chr16	48648461	48650621	(41687724)	C	L1MA5A	LINE/L1	(4656)	2910	791	1469177
866	19.2	3.5	2.5	chr16	49426736	49426933	(40911412)	C	L1MC1	LINE/L1	(0)	6333	6134	1470513
299	29.2	3.3	1.1	chr16	49426962	49427051	(40911294)	C	L2b	LINE/L2	(0)	3375	3284	1470514
1045	27.5	8.6	3.9	chr16	49427158	49427665	(40910680)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	16	1470515
6793	20.6	8.1	6.9	chr16	53424104	53424848	(36913497)	C	MER57-int	LTR/ERV1	(3560)	3977	2840	1477816
993	12.8	0.7	0.0	chr16	53424850	53424997	(36913348)	C	MER57-int	LTR/ERV1	(4913)	2624	2476	1477819
631	17.1	2.3	0.8	chr16	53424998	53425127	(36913218)	C	MER61-int	LTR/ERV1	(4377)	840	709	1477820
365	12.7	0.0	0.0	chr16	53425130	53425184	(36913161)	C	MER61-int	LTR/ERV1	(6132)	55	1	1477820
2802	13.9	0.9	1.4	chr16	53425188	53425423	(36912922)	C	MER57A1	LTR/ERV1	(3)	429	195	1477820
2172	9.3	0.0	0.4	chr16	53425424	53425681	(36912664)	+	AluY	SINE/Alu	1	257	(54)	1477821
4766	23.3	9.4	4.0	chr16	57596459	57598332	(32740013)	C	L1ME3B	LINE/L1	(1818)	4328	2320	1485379
1846	14.0	2.0	0.7	chr16	57931158	57931449	(32406896)	C	AluSz6	SINE/Alu	(11)	301	6	1486089
14	20.5	5.3	5.1	chr16	57931450	57931478	(32406867)	+	(TTA)n	Simple_repeat	3	32	(0)	1486090
404	25.7	1.7	6.6	chr16	57931552	57931672	(32406673)	+	MIR3	SINE/MIR	36	150	(58)	1486091
2114	15.2	4.1	13.8	chr16	68944753	68944888	(21393457)	C	MER65C	LTR/ERV1	(0)	461	332	1504717
1952	11.0	9.6	0.0	chr16	68944889	68945170	(21393175)	+	AluSz	SINE/Alu	1	312	(0)	1504718
1732	17.5	1.8	0.0	chr16	69906626	69906899	(20431446)	+	AluJo	SINE/Alu	24	302	(10)	1506855
2627	17.9	7.0	7.6	chr16	69906900	69907433	(20430912)	C	Tigger9b	DNA/TcMar-Tigger	(66)	558	1	1506854
797	21.5	7.3	5.1	chr16	72521540	72521794	(17816551)	+	L1MC5	LINE/L1	9007	9267	(37)	1511566
1144	24.0	10.2	10.2	chr16	72521853	72522295	(17816050)	C	L1MC5a	LINE/L1	(1966)	811	400	1511567
356	26.1	7.3	0.0	chr16	75280661	75280775	(15057570)	C	MIR3	SINE/MIR	(45)	163	40	1516446
1231	19.1	10.7	8.0	chr16	75280862	75281091	(15057254)	C	MER21C	LTR/ERVL	(58)	880	656	1516447
1888	14.5	2.0	1.0	chr16	75281092	75281381	(15056964)	C	AluJb	SINE/Alu	(15)	297	5	1516448
1053	13.3	5.2	1.2	chr16	78096647	78096813	(12241532)	+	MER20	DNA/hAT-Charlie	46	219	(0)	1521124
1774	23.9	11.2	1.4	chr16	79494109	79494601	(10843744)	C	MLT1E2	LTR/ERVL-MaLR	(0)	627	81	1523661
2296	22.0	6.7	3.0	chr16	79494605	79495162	(10843183)	C	MER21C	LTR/ERVL	(6)	932	353	1523662
256	29.8	5.0	0.0	chr16	86337821	86337914	(4000431)	+	MIR	SINE/MIR	163	261	(1)	1536471
246	26.5	6.4	4.7	chr16	90017509	90017605	(320740)	+	L1MC5a	LINE/L1	2547	2650	(127)	1542238
279	27.6	11.0	3.4	chr16	90018055	90018201	(320144)	C	MIRb	SINE/MIR	(89)	179	18	1542240
1138	7.3	0.0	0.0	chr17	3617036	3617171	(79640270)	C	AluSz	SINE/Alu	(176)	136	1	1551385
437	32.0	4.2	4.5	chr17	3617193	3617434	(79640007)	+	MER57A-int	LTR/ERV1	3	243	(5944)	1551386
471	30.8	2.3	9.2	chr17	6557656	6557884	(76699557)	C	L3	LINE/CR1	(72)	4027	3815	1557323
522	35.7	12.1	4.6	chr17	8599925	8600986	(74656455)	C	L2	LINE/L2	(1908)	1511	360	1561064
209	37.8	0.0	0.0	chr17	15293008	15293089	(67964352)	+	MIRc	SINE/MIR	37	118	(150)	1572815
1650	19.0	5.7	0.3	chr17	17150847	17151009	(66106432)	C	AluJo	SINE/Alu	(12)	300	137	1576123
40	2.5	0.0	0.0	chr17	17151010	17151050	(66106391)	+	(TTA)n	Simple_repeat	1	41	(0)	1576124
1650	19.0	5.7	0.3	chr17	17151051	17151170	(66106271)	C	AluJo	SINE/Alu	(176)	136	1	1576123
1074	28.6	8.1	4.0	chr17	17151171	17151804	(66105637)	C	MER77B	LTR/ERVL	(214)	724	6	1576122
353	29.2	5.3	2.6	chr17	17586100	17586313	(65671128)	+	L1MEg	LINE/L1	2137	2293	(4124)	1576906
2801	23.0	12.3	1.6	chr17	17586407	17586720	(65670721)	+	L1MEg	LINE/L1	2886	3265	(3056)	1576906
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
252	25.3	12.8	1.0	chr17	29398844	29398939	(53858502)	+	MIRb	SINE/MIR	152	260	(2)	1590571
1810	14.0	0.7	0.7	chr17	29398985	29399256	(53858185)	C	AluJb	SINE/Alu	(11)	301	30	1590572
2367	8.6	0.0	0.0	chr17	29399312	29399612	(53857829)	C	AluY	SINE/Alu	(8)	303	3	1590573
993	4.0	0.0	0.0	chr17	32822870	32822994	(50434447)	+	L1PA5	LINE/L1	6030	6154	(0)	1597471
1727	22.9	16.2	2.1	chr17	32858795	32859328	(50398113)	C	L1MC4	LINE/L1	(959)	7083	6460	1597536
443	31.5	16.5	0.5	chr17	32859577	32859799	(50397642)	C	L3	LINE/CR1	(219)	3880	3615	1597535
660	30.3	4.2	1.7	chr17	34158627	34158858	(49098583)	C	MIR	SINE/MIR	(7)	255	18	1599974
38	0.0	0.0	0.0	chr17	34158927	34158959	(49098482)	+	(AC)n	Simple_repeat	1	33	(0)	1599975
1753	11.4	3.0	14.0	chr17	40385712	40385841	(42871600)	+	AluSx1	SINE/Alu	1	133	(179)	1611941
1882	15.3	0.7	1.7	chr17	40385842	40386141	(42871300)	+	AluSz	SINE/Alu	2	298	(14)	1611942
1753	11.4	3.0	14.0	chr17	40386142	40386353	(42871088)	+	AluSx1	SINE/Alu	134	304	(8)	1611941
2287	8.5	1.0	0.0	chr17	41955418	41955723	(41301718)	C	AluY	SINE/Alu	(2)	309	1	1614662
181	33.8	0.0	1.5	chr17	50652575	50652640	(32604801)	+	L2	LINE/L2	357	421	(2998)	1632186
1197	17.6	7.8	1.1	chr17	50652767	50653041	(32604400)	C	MER57A-int	LTR/ERV1	(5890)	297	3	1632184
2425	9.3	0.6	0.0	chr17	50653064	50653374	(32604067)	+	AluSq2	SINE/Alu	1	313	(0)	1632187
2077	14.2	5.3	5.3	chr17	50653379	50653468	(32603973)	C	MER57C1	LTR/ERV1	(4)	381	306	1632184
285	26.8	4.0	1.2	chr17	56809484	56810493	(26446948)	+	(AC)n	Simple_repeat	1	1050	(0)	1642023
1296	17.0	4.9	1.1	chr17	57162042	57162315	(26095126)	C	L1MB7	LINE/L1	(1999)	4147	3863	1642783
905	25.4	6.1	4.2	chr17	57162330	57162693	(26094748)	C	MER21C	LTR/ERVL	(42)	896	510	1642785
2447	7.6	0.0	2.5	chr17	58581032	58581345	(24676096)	+	AluSg	SINE/Alu	2	307	(3)	1645250
2402	12.9	1.1	1.6	chr17	64465941	64466317	(18791124)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1656653
17260	9.6	1.0	0.9	chr17	65831871	65835143	(17422298)	+	L1PA14	LINE/L1	2668	5943	(218)	1659334
3923	15.7	3.3	3.3	chr17	68466759	68467481	(14789960)	C	L1MB5	LINE/L1	(0)	6174	5452	1664243
14	0.0	0.0	0.0	chr17	68467866	68467883	(14789558)	+	(GTT)n	Simple_repeat	1	18	(0)	1664244
1211	18.4	0.0	3.9	chr17	68467886	68468118	(14789323)	C	AluJb	SINE/Alu	(3)	309	86	1664245
381	31.8	6.1	0.0	chr17	74312248	74312401	(8945040)	+	MIR1_Amn	SINE/MIR	15	178	(52)	1673917
249	35.3	1.9	1.9	chr17	74312420	74312523	(8944918)	+	L2c	LINE/L2	3283	3386	(1)	1673918
289	24.4	4.8	6.3	chr17	74312702	74312828	(8944613)	+	MIR3	SINE/MIR	57	181	(27)	1673919
22762	6.1	1.0	2.2	chr17	75026148	75027235	(8230206)	+	HERVK14-int	LTR/ERVK	1935	3025	(3071)	1675199
1635	12.4	0.0	14.2	chr17	77878814	77879143	(5378298)	C	AluJo	SINE/Alu	(29)	283	1	1680806
12	17.7	3.1	0.0	chr17	77879325	77879356	(5378085)	+	(GGTAGG)n	Simple_repeat	1	33	(0)	1680807
260	16.1	4.6	1.6	chr17	77879622	77879684	(5377757)	C	L2a	LINE/L2	(1)	3425	3361	1680808
207	35.4	1.2	0.0	chr17	78128964	78129045	(5128396)	+	MIRc	SINE/MIR	101	183	(85)	1681243
380	25.0	3.5	5.2	chr17	78129305	78129455	(5127986)	C	MIRb	SINE/MIR	(44)	224	66	1681244
971	21.0	21.6	1.1	chr17	80453963	80454450	(2802991)	C	L2a	LINE/L2	(327)	3099	2481	1685037
402	20.0	4.5	0.0	chr17	81269994	81270098	(1987343)	+	L1ME4b	LINE/L1	36	145	(747)	1686045
367	30.8	6.0	1.3	chr17	81270189	81270484	(1986957)	+	L1ME4b	LINE/L1	321	483	(409)	1686045
12	15.7	2.6	5.0	chr17	81648548	81648586	(1608855)	+	(ACCCCC)n	Simple_repeat	1	40	(0)	1686574
1813	13.9	0.3	7.1	chr17	81649076	81649245	(1608196)	C	AluJb	SINE/Alu	(8)	304	135	1686575
2323	11.6	0.6	0.0	chr17	81649246	81649556	(1607885)	C	AluSp	SINE/Alu	(0)	313	1	1686576
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
6076	26.1	7.9	7.6	chr18	21207110	21207614	(59165671)	C	HAL1	LINE/L1	(342)	2165	1746	1712119
2529	7.5	0.7	1.0	chr18	21207615	21207920	(59165365)	C	AluY	SINE/Alu	(6)	305	1	1712121
1652	21.6	0.0	0.7	chr18	21807149	21807435	(58565850)	+	AluJb	SINE/Alu	1	285	(27)	1713349
248	36.2	0.0	1.9	chr18	26937470	26937576	(53435709)	+	MIR	SINE/MIR	3	107	(155)	1721714
429	26.3	12.8	3.1	chr18	26937635	26937795	(53435490)	+	MIRb	SINE/MIR	64	242	(26)	1721715
1809	25.0	6.3	3.9	chr18	29053087	29053474	(51319811)	+	L1ME1	LINE/L1	4837	5255	(1064)	1724523
618	26.3	8.3	0.0	chr18	29053475	29053672	(51319613)	C	MER20	DNA/hAT-Charlie	(0)	219	4	1724533
2611	24.4	7.1	4.5	chr18	29053673	29053982	(51319303)	+	L1ME1	LINE/L1	5256	5549	(770)	1724523
310	36.9	5.3	0.5	chr18	33521763	33521961	(46851324)	+	L1MEc	LINE/L1	188	396	(6004)	1730847
516	25.8	11.1	0.9	chr18	33522194	33522420	(46850865)	+	L1MEd	LINE/L1	3443	3695	(2451)	1730846
312	31.6	0.8	0.8	chr18	33522452	33522569	(46850716)	C	Charlie2b	DNA/hAT-Charlie	(2429)	353	236	1730848
22	24.6	3.2	0.0	chr18	35267705	35267766	(45105519)	+	(AT)n	Simple_repeat	1	64	(0)	1733077
342	25.7	2.6	6.6	chr18	37644597	37644717	(42728568)	+	L1ME3B	LINE/L1	348	463	(5952)	1736340
2789	25.7	5.9	5.8	chr18	37644773	37646018	(42727267)	+	L1ME3B	LINE/L1	680	1927	(4488)	1736340
3510	22.5	5.2	1.4	chr18	38855717	38856500	(41516785)	+	MER21B	LTR/ERVL	33	847	(21)	1737924
2224	18.6	2.2	7.7	chr18	38856582	38856696	(41516589)	C	MER21C	LTR/ERVL	(10)	928	828	1737925
1999	16.7	0.0	1.0	chr18	38856697	38857007	(41516278)	C	AluSx	SINE/Alu	(0)	312	5	1737926
78	6.2	1.0	0.9	chr18	52792755	52792858	(27580427)	+	(ATTCC)n	Simple_repeat	1	105	(0)	1758954
28122	17.0	7.8	7.8	chr18	52792859	52792933	(27580352)	C	HUERS-P3b-int	LTR/ERV1	(7329)	89	25	1758952
1368	12.6	0.0	1.5	chr18	57811039	57811236	(22562049)	C	AluSx1	SINE/Alu	(31)	281	87	1766229
1107	27.0	20.2	3.6	chr18	57811238	57811836	(22561449)	C	HAL1	LINE/L1	(156)	2351	1651	1766227
1985	19.2	10.4	2.2	chr18	73948953	73949555	(6423730)	+	MER77B	LTR/ERVL	1	683	(17)	1789268
277	26.9	2.1	2.1	chr18	73949556	73949650	(6423635)	+	MIR	SINE/MIR	159	253	(9)	1789267
2069	17.5	3.0	1.8	chr18	74776670	74777064	(5596221)	C	Tigger2a	DNA/TcMar-Tigger	(34)	400	1	1790314
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
227	22.0	0.0	0.0	chr19	758933	758991	(57858625)	C	L1M4	LINE/L1	(3652)	2494	2436	1797532
1404	12.8	0.5	5.3	chr19	1141697	1141922	(57475694)	C	AluJo	SINE/Alu	(97)	215	1	1798281
21	3.7	0.0	0.0	chr19	2859700	2859727	(55757889)	+	(CCA)n	Simple_repeat	1	28	(0)	1801791
2368	10.9	0.3	0.0	chr19	3148077	3148387	(55469229)	C	AluSx	SINE/Alu	(0)	312	1	1802513
427	31.8	1.7	8.9	chr19	3148388	3148501	(55469115)	C	MIR	SINE/MIR	(111)	151	38	1802512
189	22.9	4.0	0.0	chr19	3148658	3148705	(55468911)	C	OldhAT1	DNA/hAT-Ac	(927)	1921	1872	1802514
33	2.6	2.6	0.0	chr19	3148868	3148906	(55468710)	+	(CAGGG)n	Simple_repeat	1	40	(0)	1802515
374	33.3	8.3	0.0	chr19	6986598	6986741	(51630875)	+	LTR16C	LTR/ERVL	70	226	(263)	1811736
366	36.9	4.7	0.4	chr19	7141814	7142004	(51475612)	+	MIR	SINE/MIR	10	214	(54)	1812099
485	6.9	0.0	0.0	chr19	7142011	7142068	(51475548)	C	AluSz6	SINE/Alu	(16)	296	239	1812100
2085	11.9	4.2	0.0	chr19	7142121	7142413	(51475203)	+	AluSz	SINE/Alu	1	306	(6)	1812101
379	26.5	11.3	0.0	chr19	8594204	8594342	(50023274)	+	MIRc	SINE/MIR	61	223	(45)	1815669
2117	11.4	0.0	3.3	chr19	8597808	8598113	(50019503)	C	AluSq2	SINE/Alu	(17)	296	1	1815675
357	24.1	16.5	0.2	chr19	8598119	8598269	(50019347)	C	MIR	SINE/MIR	(77)	191	10	1815672
2224	9.6	0.7	0.0	chr19	11318646	11318946	(47298670)	C	AluSx1	SINE/Alu	(9)	303	1	1822035
2009	20.0	4.6	7.8	chr19	11318947	11319317	(47298299)	C	MER21C	LTR/ERVL	(9)	929	566	1822036
17	10.7	7.5	0.0	chr19	12747659	12747703	(45869913)	+	(CCCTCTTG)n	Simple_repeat	1	48	(0)	1825136
21	16.1	2.0	1.9	chr19	12747914	12747964	(45869652)	+	(CTCTGCC)n	Simple_repeat	1	52	(0)	1825137
13	10.8	3.1	3.0	chr19	12748134	12748165	(45869451)	+	(TCACCC)n	Simple_repeat	1	33	(0)	1825138
1328	25.3	6.1	1.6	chr19	13475215	13475588	(45142028)	C	MLT1I	LTR/ERVL-MaLR	(1)	410	19	1826878
268	30.9	7.8	0.9	chr19	13475605	13475712	(45141904)	C	MIRc	SINE/MIR	(147)	121	6	1826879
2121	14.1	0.0	0.3	chr19	14317772	14318077	(44299539)	+	AluJr	SINE/Alu	4	308	(4)	1829169
2170	16.1	0.0	0.0	chr19	17664919	17665252	(40952364)	+	AluSz6	SINE/Alu	2	312	(0)	1836948
643	18.2	2.6	2.6	chr19	17665509	17665668	(40951948)	+	MIRb	SINE/MIR	15	174	(56)	1836949
907	14.4	0.0	0.0	chr19	19523308	19523432	(39094184)	+	AluJr	SINE/Alu	1	125	(187)	1841127
1583	18.1	2.7	5.8	chr19	19523446	19523644	(39093972)	C	AluJb	SINE/Alu	(0)	312	124	1841128
2180	12.0	0.0	1.0	chr19	19523645	19523945	(39093671)	+	AluSx	SINE/Alu	1	298	(14)	1841129
2125	14.0	0.3	1.3	chr19	21395902	21396215	(37221401)	C	AluSx1	SINE/Alu	(0)	312	2	1843966
24	19.6	2.1	7.1	chr19	21396224	21396309	(37221307)	+	(CTTT)n	Simple_repeat	1	82	(0)	1843967
1751	16.4	15.1	0.3	chr19	28388652	28389013	(30228603)	+	MSTB	LTR/ERVL-MaLR	2	426	(0)	1848684
269	29.3	4.1	3.5	chr19	29769325	29769469	(28848147)	+	MIR	SINE/MIR	36	181	(81)	1850803
305	30.3	4.3	7.8	chr19	31985764	31985956	(26631660)	C	MamRep4096	DNA/hAT-Tip100	(103)	323	138	1854035
1890	14.7	0.3	4.2	chr19	31985969	31986280	(26631336)	+	AluJr	SINE/Alu	2	301	(11)	1854036
201	16.9	13.2	0.0	chr19	33360629	33360687	(25256929)	C	OldhAT1	DNA/hAT-Ac	(1668)	1180	1113	1856670
283	29.6	16.7	0.0	chr19	35164241	35164365	(23453251)	+	L2a	LINE/L2	3277	3426	(0)	1859850
800	20.1	1.2	0.0	chr19	35164428	35164591	(23453025)	C	MLT1H	LTR/ERVL-MaLR	(10)	539	374	1859851
1948	13.9	0.7	2.6	chr19	35172191	35172493	(23445123)	+	AluSz	SINE/Alu	1	297	(15)	1859873
863	23.4	9.1	5.4	chr19	35172494	35172619	(23444997)	C	MER113	DNA/hAT-Charlie	(218)	303	187	1859872
2157	21.6	7.7	2.5	chr19	35172696	35173254	(23444362)	C	MER77	LTR/ERVL	(258)	673	3	1859874
12739	0.5	0.0	2.1	chr19	36270447	36272042	(22345574)	+	SST1	Satellite/centr	1	1563	(0)	1862253
24	29.7	0.0	2.5	chr19	36272043	36272123	(22345493)	+	(GT)n	Simple_repeat	1	81	(0)	1862254
26	23.7	3.8	3.6	chr19	36272113	36272129	(22345487)	+	(CTGTCT)n	Simple_repeat	1	66	(44)	1862255
36	20.5	1.2	1.2	chr19	36272130	36272209	(22345407)	+	(TC)n	Simple_repeat	1	81	(0)	1862256
1718	17.2	0.0	3.0	chr19	40157206	40157502	(18460114)	C	AluJr	SINE/Alu	(24)	288	1	1870346
704	23.1	6.1	1.3	chr19	40157755	40157910	(18459706)	C	FRAM	SINE/Alu	(12)	164	1	1870347
840	18.9	0.0	0.0	chr19	40262126	40262257	(18355359)	+	FLAM_C	SINE/Alu	2	133	(10)	1870604
395	26.6	3.2	2.4	chr19	40262268	40262431	(18355185)	C	MIR	SINE/MIR	(25)	183	19	1870605
596	31.9	6.8	3.1	chr19	40262595	40262850	(18354766)	+	MIRb	SINE/MIR	3	268	(0)	1870606
12	18.1	3.1	0.0	chr19	42293673	42293704	(16323912)	+	(CCCAGC)n	Simple_repeat	1	33	(0)	1874965
1215	13.4	0.2	0.0	chr19	44410766	44412174	(14205442)	+	ACRO1	Satellite/acro	1	1411	(0)	1878697
1495	27.8	1.2	1.9	chr19	51905172	51905603	(6712013)	C	MER57F	LTR/ERV1	(6)	429	1	1896458
6569	11.8	0.7	0.9	chr19	51905692	51906661	(6710955)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	1896459
2977	21.6	9.3	2.6	chr19	51936785	51937462	(6680154)	+	MER21C	LTR/ERVL	196	920	(18)	1896516
361	31.5	5.3	4.5	chr19	54102294	54102441	(4515175)	C	L2c	LINE/L2	(128)	3259	3105	1901086
242	23.5	0.0	0.0	chr19	54102439	54102489	(4515127)	+	MIRc	SINE/MIR	98	148	(120)	1901088
232	30.1	5.2	0.4	chr19	55670357	55670454	(2947162)	C	L2a	LINE/L2	(18)	3408	3251	1904263
830	16.4	2.9	0.0	chr19	56092536	56092700	(2524916)	C	HAL1M8	LINE/L1	(849)	2142	1973	1905100
231	31.0	9.9	2.0	chr19	56093331	56093432	(2524184)	C	HAL1M8	LINE/L1	(981)	2010	1900	1905101
2628	19.9	12.3	6.8	chr19	57174415	57175154	(1442462)	+	MER21C	LTR/ERVL	144	930	(8)	1907375
3524	23.0	4.7	1.4	chr2	10851915	10852796	(231340733)	+	MER21C	LTR/ERVL	1	913	(25)	1925605
2509	22.8	5.4	6.0	chr2	10852811	10853998	(231339531)	C	L1MB3	LINE/L1	(371)	5812	5287	1925604
581	29.9	9.3	5.0	chr2	11145553	11145851	(231047678)	+	MLT1J2	LTR/ERVL-MaLR	37	349	(99)	1926111
236	30.3	8.1	4.3	chr2	11145908	11146086	(231047443)	C	MIRc	SINE/MIR	(52)	216	22	1926112
431	22.7	8.2	1.9	chr2	19727653	19727813	(222465716)	C	MIR3	SINE/MIR	(45)	185	25	1939213
13	27.2	0.0	5.2	chr2	19727894	19727951	(222465578)	+	(TCCCC)n	Simple_repeat	1	58	(0)	1939214
291	25.0	5.3	0.0	chr2	20101817	20101888	(222091641)	+	Charlie1	DNA/hAT-Charlie	1	76	(2705)	1939758
197	26.3	13.6	1.0	chr2	20101906	20102001	(222091528)	+	L2	LINE/L2	2701	2810	(609)	1939759
399	15.3	11.7	0.0	chr2	20102114	20102211	(222091318)	C	MER65A	LTR/ERV1	(0)	445	335	1939760
506	20.6	0.9	0.0	chr2	20102184	20102290	(222091239)	+	MER65A	LTR/ERV1	338	445	(0)	1939760
439	10.2	0.0	0.0	chr2	20102308	20102366	(222091163)	C	MER65A	LTR/ERV1	(154)	291	233	1939761
1814	15.7	4.6	1.0	chr2	20102371	20102663	(222090866)	+	AluJo	SINE/Alu	2	305	(7)	1939762
2928	20.5	11.6	4.0	chr2	20330256	20331006	(221862523)	+	MER21B	LTR/ERVL	1	816	(52)	1940144
332	12.3	6.6	0.0	chr2	20331054	20331110	(221862419)	+	MER21-int	LTR/ERVL	2	62	(4129)	1940144
1514	19.2	9.0	1.8	chr2	20331265	20331604	(221861925)	+	MER21-int	LTR/ERVL	146	512	(3679)	1940144
195	35.9	1.5	0.0	chr2	32810256	32810319	(209383210)	C	L2	LINE/L2	(681)	2738	2674	1960996
223	32.9	14.0	3.4	chr2	32810454	32810777	(209382752)	C	L2	LINE/L2	(828)	2591	2228	1960996
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
342	20.9	7.5	1.1	chr2	37378221	37378307	(204815222)	C	MLT1K	LTR/ERVL-MaLR	(0)	595	503	1967638
871	30.2	4.3	1.9	chr2	37378327	37378691	(204814838)	C	MLT1K	LTR/ERVL-MaLR	(154)	441	68	1967638
2463	11.7	0.0	0.3	chr2	37378795	37379103	(204814426)	C	AluSz	SINE/Alu	(4)	308	1	1967639
2836	23.1	4.5	2.8	chr2	38653466	38654148	(203539381)	+	MER21C	LTR/ERVL	173	868	(70)	1969647
2264	10.6	0.0	1.9	chr2	42503919	42504229	(199689300)	C	AluSq2	SINE/Alu	(8)	305	1	1975701
1977	12.2	0.4	0.4	chr2	42504269	42504539	(199688990)	C	AluSx	SINE/Alu	(41)	271	1	1975702
883	16.0	0.0	0.0	chr2	42504666	42504796	(199688733)	C	FLAM_C	SINE/Alu	(12)	131	1	1975703
388	24.3	5.0	16.4	chr2	42504982	42505115	(199688414)	C	MIRb	SINE/MIR	(31)	237	114	1975704
7097	16.0	6.6	2.9	chr2	46106200	46106441	(196087088)	C	L1MC3	LINE/L1	(1190)	6770	6515	1981741
1825	19.8	0.2	8.9	chr2	46106442	46106868	(196086661)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	1981743
539	30.8	9.1	5.2	chr2	54938021	54938063	(187255466)	C	LTR86B1	LTR/ERVL	(23)	470	428	1995046
1818	8.8	14.1	0.0	chr2	54938064	54938313	(187255216)	+	AluSq	SINE/Alu	1	291	(22)	1995047
7929	21.9	6.3	5.1	chr2	55851634	55852657	(186340872)	C	MER65-int	LTR/ERV1	(3776)	1095	54	1996663
2290	14.0	7.0	3.5	chr2	55852713	55853141	(186340388)	C	MER65A	LTR/ERV1	(0)	445	1	1996663
3242	8.9	3.0	0.2	chr2	63566154	63566612	(178626917)	+	MER4A1	LTR/ERV1	1	472	(0)	2008023
3235	21.2	3.6	6.4	chr2	63566613	63567450	(178626079)	C	MER21B	LTR/ERVL	(64)	804	3	2008024
1926	14.4	0.7	0.3	chr2	64918275	64918558	(177274971)	C	AluJb	SINE/Alu	(26)	286	2	2010189
703	20.5	8.8	1.3	chr2	64918590	64918747	(177274782)	C	MER5A	DNA/hAT-Charlie	(6)	183	13	2010190
351	21.8	7.6	1.8	chr2	65319457	65319568	(176873961)	+	MLT1K	LTR/ERVL-MaLR	451	569	(26)	2011051
296	28.2	10.2	7.2	chr2	65319705	65319941	(176873588)	C	MIRb	SINE/MIR	(21)	247	3	2011052
1342	27.0	7.6	8.1	chr2	67450354	67450704	(174742825)	+	MLT1G	LTR/ERVL-MaLR	235	591	(0)	2014104
23	0.0	0.0	0.0	chr2	67450715	67450739	(174742790)	+	(A)n	Simple_repeat	1	25	(0)	2014107
3661	15.1	8.2	4.1	chr2	67450760	67451541	(174741988)	C	MER21B	LTR/ERVL	(55)	813	6	2014108
543	27.9	11.9	0.0	chr2	67784642	67784870	(174408659)	+	MIRb	SINE/MIR	9	268	(0)	2014541
2098	12.3	0.0	0.7	chr2	69775947	69776275	(172417254)	C	AluSx1	SINE/Alu	(0)	312	1	2017739
800	13.1	2.4	0.0	chr2	69776319	69776440	(172417089)	C	MER21-int	LTR/ERVL	(4066)	125	1	2017734
3351	18.7	9.0	9.2	chr2	69776441	69776643	(172416886)	C	MER21C	LTR/ERVL	(0)	938	770	2017734
1659	8.2	4.3	0.0	chr2	69776644	69776863	(172416666)	C	MER30	DNA/hAT-Charlie	(0)	230	1	2017740
1597	12.9	0.3	12.3	chr2	70821727	70822058	(171371471)	C	AluJr	SINE/Alu	(20)	292	1	2019667
1873	22.9	11.6	10.3	chr2	70822059	70822288	(171371241)	+	MER21C	LTR/ERVL	674	906	(32)	2019666
2232	16.4	2.5	0.9	chr2	72663613	72664028	(169529501)	+	L1MC2	LINE/L1	5907	6329	(15)	2022350
675	21.7	0.8	0.0	chr2	72664029	72664148	(169529381)	+	AluJo	SINE/Alu	3	123	(189)	2022351
2232	16.4	2.5	0.9	chr2	72664149	72664161	(169529368)	+	L1MC2	LINE/L1	6330	6342	(2)	2022350
5295	23.9	0.5	1.4	chr2	72664175	72665254	(169528275)	+	L1PA16	LINE/L1	4	1073	(5430)	2022352
401	22.4	14.6	3.4	chr2	74231526	74231701	(167961828)	+	MIRb	SINE/MIR	2	200	(68)	2025047
2856	12.7	1.4	0.0	chr2	76471868	76472292	(165721237)	+	MER57A1	LTR/ERV1	2	432	(0)	2028411
4068	15.0	1.8	2.6	chr2	76472293	76472970	(165720559)	+	MER57-int	LTR/ERV1	1	672	(6865)	2028411
286	29.0	7.6	8.8	chr2	84907528	84907690	(157285839)	C	L2c	LINE/L2	(17)	3370	3182	2039636
309	17.9	2.9	0.0	chr2	85256593	85256659	(156936870)	+	L1ME3G	LINE/L1	856	924	(0)	2040398
261	16.0	0.0	2.0	chr2	85256657	85256707	(156936822)	+	L1ME3	LINE/L1	6040	6089	(73)	2040399
2130	9.8	3.7	0.7	chr2	85256710	85256994	(156936535)	+	AluSx1	SINE/Alu	1	294	(18)	2040400
239	32.5	3.9	1.5	chr2	88460580	88460779	(153732750)	+	L2	LINE/L2	2656	2860	(559)	2046052
360	20.9	1.8	0.9	chr2	88460895	88461005	(153732524)	C	MER113A	DNA/hAT-Charlie	(16)	298	187	2046057
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
393	24.4	10.2	0.0	chr2	102472952	102473066	(139720463)	+	MER94	DNA/hAT-Blackjack	7	134	(0)	2061121
2525	10.3	0.0	0.0	chr2	104986987	104987287	(137206242)	+	AluSx	SINE/Alu	1	301	(11)	2064224
438	27.1	7.3	2.9	chr2	104987339	104987509	(137206020)	+	MIRc	SINE/MIR	17	195	(73)	2064225
1938	23.2	13.7	1.2	chr2	107024358	107024936	(135168593)	C	MLT2F	LTR/ERVL	(0)	663	1	2067336
3021	20.0	5.4	6.5	chr2	110167110	110167916	(132025613)	+	MER21C	LTR/ERVL	9	898	(40)	2071835
415	17.1	1.4	0.0	chr2	110167934	110168003	(132025526)	+	MER33	DNA/hAT-Charlie	254	324	(0)	2071836
1703	18.5	0.0	1.6	chr2	111027903	111028210	(131165319)	+	AluJo	SINE/Alu	1	303	(9)	2073035
2830	24.7	7.0	8.2	chr2	111028211	111028276	(131165253)	C	L1ME1	LINE/L1	(1896)	4250	4185	2073031
2335	28.2	4.9	1.0	chr2	116344977	116345765	(125847764)	C	L1MEc	LINE/L1	(5548)	852	32	2080937
1255	25.6	10.5	5.6	chr2	117915586	117916190	(124277339)	C	L1ME4b	LINE/L1	(6)	886	249	2082917
214	28.6	4.5	2.8	chr2	118854606	118854713	(123338816)	C	MIR3	SINE/MIR	(17)	191	82	2084339
10190	17.1	7.1	5.8	chr2	120199035	120199814	(121993715)	+	L1MB4	LINE/L1	4667	5472	(708)	2086577
560	31.0	4.8	0.4	chr2	130374805	130375044	(111818485)	+	LTR16C	LTR/ERVL	145	395	(94)	2101736
2028	18.7	6.1	3.4	chr2	151249222	151249369	(90944160)	C	MER65C	LTR/ERV1	(0)	461	293	2130554
2538	6.7	0.3	2.2	chr2	151249370	151249682	(90943847)	C	AluY	SINE/Alu	(4)	307	1	2130555
943	21.3	1.8	0.6	chr2	151292895	151293063	(90900466)	+	AluJo	SINE/Alu	134	304	(8)	2130631
251	26.0	9.1	2.4	chr2	151293106	151293230	(90900299)	+	MIRb	SINE/MIR	98	257	(11)	2130632
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
3006	10.3	3.0	0.0	chr2	167970613	167971031	(74222498)	+	MER57A1	LTR/ERV1	1	432	(0)	2152888
4077	12.3	2.7	0.8	chr2	167971032	167971684	(74221845)	+	MER57-int	LTR/ERV1	1	666	(6871)	2152888
616	21.3	5.7	2.0	chr2	168478510	168478662	(73714867)	+	MER5A1	DNA/hAT-Charlie	1	159	(7)	2153619
577	27.0	8.3	6.3	chr2	171489272	171489645	(70703884)	C	LTR86B1	LTR/ERVL	(8)	485	67	2158513
559	25.9	6.1	0.3	chr2	196213854	196214019	(45979510)	C	MIR3	SINE/MIR	(36)	172	3	2192069
537	30.5	9.8	1.5	chr2	196214052	196214291	(45979238)	C	MIRb	SINE/MIR	(1)	267	5	2192070
2009	11.9	1.8	0.7	chr2	196768041	196768318	(45425211)	C	AluSz	SINE/Alu	(31)	281	1	2192872
15143	15.6	0.9	2.5	chr2	216951971	216953193	(25240336)	C	L1PREC2	LINE/L1	(1382)	6759	5542	2223705
319	12.5	7.7	0.0	chr2	216953194	216953241	(25240288)	+	AluYk11	SINE/Alu	1	52	(259)	2223706
2001	12.0	0.0	0.4	chr2	216953242	216953515	(25240014)	+	AluSz	SINE/Alu	28	300	(12)	2223707
4142	17.3	4.3	1.4	chr2	217872251	217873205	(24320324)	+	L1MB8	LINE/L1	5185	6174	(4)	2225082
1787	15.7	2.3	1.0	chr2	218215338	218215637	(23977892)	+	AluJb	SINE/Alu	1	304	(8)	2225664
2254	9.2	0.7	0.3	chr2	218215638	218215931	(23977598)	+	AluSx1	SINE/Alu	1	295	(17)	2225665
372	28.9	2.4	1.6	chr2	219419758	219419880	(22773649)	C	L2b	LINE/L2	(13)	3362	3239	2227917
14	4.9	0.0	0.0	chr2	219420066	219420086	(22773443)	+	(CTGT)n	Simple_repeat	1	21	(0)	2227918
295	29.5	2.5	0.0	chr2	219706186	219706263	(22487266)	+	MamGypLTR3	LTR/Gypsy	1	80	(814)	2228359
1643	15.5	6.0	0.4	chr2	219706275	219706567	(22486962)	C	AluJb	SINE/Alu	(0)	312	2	2228360
284	30.6	10.1	0.6	chr2	223379492	223379652	(18813877)	C	L4_A_Mam	LINE/RTE-X	(1526)	3464	3287	2234130
759	28.4	2.7	5.9	chr2	223380067	223380369	(18813160)	+	MER65-int	LTR/ERV1	701	993	(3878)	2234131
2345	9.6	0.0	0.0	chr2	223835376	223835667	(18357862)	+	AluSg	SINE/Alu	2	293	(17)	2234955
2070	18.8	2.4	0.2	chr2	232422442	232422858	(9770671)	+	MER65A	LTR/ERV1	9	434	(11)	2248647
885	27.5	0.8	3.2	chr2	232422875	232422992	(9770537)	+	MER65-int	LTR/ERV1	11	127	(4744)	2248647
7372	7.9	1.4	1.9	chr2	232422993	232423965	(9769564)	+	LTR5_Hs	LTR/ERVK	1	968	(0)	2248648
41	0.0	0.0	0.0	chr2	233859735	233859769	(8333760)	+	(TG)n	Simple_repeat	1	35	(0)	2251030
246	29.7	1.3	0.0	chr2	236239431	236239504	(5954025)	C	L3	LINE/CR1	(214)	3885	3811	2254719
291	25.3	3.7	0.0	chr2	236239510	236239588	(5953941)	C	L3	LINE/CR1	(214)	3885	3804	2254719
2142	9.4	0.3	0.7	chr2	237899073	237899370	(4294159)	C	AluSx3	SINE/Alu	(14)	297	1	2257012
2949	18.8	4.5	6.6	chr2	240650947	240651654	(1541875)	+	MER77B	LTR/ERVL	1	692	(8)	2260249
1302	27.1	0.3	1.3	chr2	240651681	240651994	(1541535)	+	MER21-int	LTR/ERVL	13	323	(3868)	2260249
2694	13.3	3.3	1.7	chr20	693511	693738	(63750429)	C	MSTB	LTR/ERVL-MaLR	(0)	426	197	2263531
2168	13.8	0.0	0.6	chr20	693739	694049	(63750118)	C	AluSz6	SINE/Alu	(3)	309	1	2263532
3082	18.6	11.6	3.5	chr20	2604482	2605289	(61838878)	+	MER21C	LTR/ERVL	1	899	(39)	2267268
1788	13.9	7.5	9.5	chr20	2605294	2605673	(61838494)	C	MLT1B	LTR/ERVL-MaLR	(16)	374	3	2267269
1944	28.1	11.4	3.4	chr20	11277888	11278934	(53165233)	+	L2a	LINE/L2	2147	3285	(141)	2281755
490	27.9	5.6	6.3	chr20	11279122	11279392	(53164775)	C	MLT1G	LTR/ERVL-MaLR	(226)	365	97	2281756
1068	26.8	7.2	2.5	chr20	20787106	20787472	(43656695)	+	LTR16E1	LTR/ERVL	148	533	(5)	2296077
210	25.3	8.8	6.7	chr20	20787487	20787575	(43656592)	+	L2	LINE/L2	2527	2617	(802)	2296078
985	23.9	7.2	1.7	chr20	23639184	23639485	(40804682)	C	MER33	DNA/hAT-Charlie	(4)	320	1	2299954
229	25.9	13.8	0.7	chr20	23639615	23639758	(40804409)	C	L2b	LINE/L2	(255)	3120	2955	2299955
280	31.8	11.9	2.2	chr20	23639980	23640207	(40803960)	C	L1ME2z	LINE/L1	(285)	6159	5907	2299956
321	20.5	17.0	4.6	chr20	23777339	23777512	(40666655)	C	L2a	LINE/L2	(304)	3122	2923	2300106
1957	17.2	1.9	0.5	chr20	23777761	23778129	(40666038)	C	L1PB4	LINE/L1	(0)	6156	5783	2300107
322	18.6	16.7	5.4	chr20	23858983	23859130	(40585037)	C	L2a	LINE/L2	(304)	3122	2955	2300192
2308	29.1	5.8	6.1	chr20	25867794	25869361	(38574806)	C	SST1	Satellite/centr	(1)	1562	1	2302878
2287	18.2	10.3	3.1	chr20	29393166	29393686	(35050481)	C	LTR6A	LTR/ERV1	(0)	564	2	2304071
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
257	30.6	10.4	0.0	chr20	30376161	30376307	(34067860)	+	LTR89	LTR/ERVL?	698	861	(18)	2304971
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
284	27.6	11.4	5.7	chr20	33309225	33309347	(31134820)	+	L2b	LINE/L2	3244	3374	(1)	2310392
407	32.0	0.4	1.0	chr20	33309385	33309524	(31134643)	+	MIR	SINE/MIR	27	160	(102)	2310393
2112	11.3	0.0	0.0	chr20	35536782	35537074	(28907093)	C	AluSx3	SINE/Alu	(18)	293	1	2315504
24	7.7	2.3	2.3	chr20	35537095	35537137	(28907030)	+	(ATT)n	Simple_repeat	1	44	(0)	2315505
2191	7.7	0.0	5.6	chr20	35537173	35537495	(28906672)	C	AluSg4	SINE/Alu	(5)	305	1	2315506
1360	16.1	14.1	0.0	chr20	38383217	38383515	(26060652)	C	LTR48	LTR/ERV1	(236)	551	204	2322058
1720	19.2	3.4	0.0	chr20	38383510	38383852	(26060315)	+	MER77B	LTR/ERVL	329	683	(17)	2322057
302	27.9	5.8	3.7	chr20	38384026	38384159	(26060008)	C	LTR67B	LTR/ERVL	(0)	620	484	2322059
196	22.3	0.0	0.0	chr20	41058146	41058191	(23385976)	+	L2b	LINE/L2	3323	3368	(19)	2326977
2014	23.8	8.5	0.6	chr20	41058251	41058749	(23385418)	C	MLT1F1	LTR/ERVL-MaLR	(0)	569	28	2326978
373	27.0	1.1	0.0	chr20	41858269	41858357	(22585810)	C	MER65-int	LTR/ERV1	(0)	4871	4782	2328223
2301	19.5	1.9	2.2	chr20	41858612	41859072	(22585095)	C	MER65C	LTR/ERV1	(1)	460	1	2328225
1248	27.4	8.2	1.2	chr20	43176699	43177097	(21267070)	+	LTR86A2	LTR/ERVL	75	503	(5)	2330591
2536	6.9	0.3	0.0	chr20	43488987	43489291	(20954876)	C	AluY	SINE/Alu	(4)	307	2	2331287
723	12.2	5.8	6.8	chr20	43489292	43489332	(20954835)	C	MER57A-int	LTR/ERV1	(5495)	692	646	2331267
1058	15.8	0.6	0.6	chr20	43489333	43489504	(20954663)	C	LTR1F1	LTR/ERV1	(0)	729	558	2331288
1267	20.3	32.3	0.7	chr20	43489517	43489810	(20954357)	C	MER57A-int	LTR/ERV1	(5798)	389	3	2331267
1911	14.4	6.7	10.5	chr20	43489849	43489941	(20954226)	C	MER57B2	LTR/ERV1	(1)	402	314	2331267
787	11.8	10.5	0.0	chr20	43489942	43490060	(20954107)	+	FLAM_C	SINE/Alu	1	133	(10)	2331289
20	16.9	3.0	5.8	chr20	46227443	46227509	(18216658)	+	(CCCCG)n	Simple_repeat	1	69	(0)	2337225
305	35.0	4.1	0.0	chr20	46227832	46227971	(18216196)	+	MIR	SINE/MIR	29	174	(88)	2337226
191	20.9	11.8	1.5	chr20	46228044	46228111	(18216056)	C	MIRc	SINE/MIR	(175)	93	18	2337227
995	15.1	1.2	0.0	chr20	49959879	49960037	(14484130)	+	AluJr	SINE/Alu	138	298	(14)	2345708
793	11.5	2.3	0.0	chr20	49960039	49960168	(14483999)	+	MER65A	LTR/ERV1	313	445	(0)	2345704
379	27.3	2.5	4.9	chr20	49960175	49960336	(14483831)	+	MER65-int	LTR/ERV1	11	168	(4703)	2345704
1870	13.6	1.0	2.9	chr20	49960343	49960652	(14483515)	C	AluJo	SINE/Alu	(8)	304	1	2345709
756	25.1	4.5	1.9	chr20	50981855	50982069	(13462098)	C	MIR	SINE/MIR	(21)	241	21	2348143
13	14.9	0.0	3.1	chr20	50982189	50982220	(13461947)	+	G-rich	Low_complexity	1	32	(0)	2348144
905	29.6	11.8	0.7	chr20	54599794	54600308	(9843859)	C	L2a	LINE/L2	(0)	3426	2845	2355987
1540	24.4	7.0	0.2	chr20	54600310	54600785	(9843382)	C	MER77B	LTR/ERVL	(0)	700	190	2355988
1143	29.6	6.7	1.4	chr20	57791460	57791927	(6652240)	C	L1ME3	LINE/L1	(2)	6160	5665	2361806
297	30.7	11.2	0.8	chr20	58504474	58504601	(5939566)	+	MIR	SINE/MIR	117	259	(3)	2363038
231	19.6	14.9	2.0	chr20	58505044	58505142	(5939025)	C	L1ME4a	LINE/L1	(47)	6077	5964	2363039
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
40632	0.2	1.2	0.8	chr21	8214773	8218941	(38491042)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373279
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
24	15.5	7.0	0.0	chr21	8401981	8402037	(38307946)	+	(CG)n	Simple_repeat	1	61	(0)	2373511
14	13.3	9.8	0.0	chr21	8402028	8402068	(38307915)	+	(CGTC)n	Simple_repeat	1	45	(0)	2373512
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
334	30.3	5.3	0.0	chr21	9246374	9246462	(37463521)	+	AluYa8	SINE/Alu	185	278	(32)	2374337
436	12.7	0.0	0.0	chr21	9246781	9246835	(37463148)	+	AluYj4	SINE/Alu	225	279	(32)	2374338
404	15.6	1.5	0.0	chr21	9247151	9247214	(37462769)	+	AluYj4	SINE/Alu	224	288	(23)	2374339
74	12.3	0.0	0.0	chr21	9247783	9247915	(37462068)	+	(TGGAA)n	Simple_repeat	1	133	(0)	2374340
378	16.1	3.0	0.2	chr21	9247917	9247990	(37461993)	+	AluJb	SINE/Alu	216	290	(12)	2374341
1574	22.3	7.7	4.1	chr21	9258166	9258605	(37451378)	+	MER21C	LTR/ERVL	457	913	(25)	2374357
404	27.7	2.0	3.9	chr21	9258615	9258768	(37451215)	C	L2	LINE/L2	(2545)	874	724	2374355
4238	21.9	5.2	2.3	chr21	9341202	9342463	(37367520)	C	MER52A	LTR/ERV1	(0)	1755	1	2374438
2425	14.3	1.2	10.5	chr21	9342604	9343080	(37366903)	C	MER57A1	LTR/ERV1	(0)	432	1	2374439
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
23	9.8	0.0	0.0	chr21	9823504	9823536	(36886447)	+	(AC)n	Simple_repeat	1	33	(0)	2374907
1930	29.2	5.4	6.1	chr21	9823541	9824851	(36885132)	C	SST1	Satellite/centr	(1)	1562	262	2374908
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
404	28.3	11.0	2.7	chr21	10427070	10427382	(36282601)	C	L2c	LINE/L2	(213)	3174	2827	2375541
25	15.4	0.0	0.0	chr21	10427515	10427557	(36282426)	+	(CA)n	Simple_repeat	1	43	(0)	2375542
620	23.1	11.5	2.4	chr21	10427740	10427952	(36282031)	C	MIR	SINE/MIR	(11)	251	17	2375543
2003	13.2	0.3	1.7	chr21	31480760	31481054	(15228929)	C	AluSx	SINE/Alu	(21)	291	1	2401436
770	20.9	0.0	4.8	chr21	31481055	31481220	(15228763)	C	MLT1B	LTR/ERVL-MaLR	(56)	334	177	2401434
3150	22.1	7.7	0.9	chr21	31481325	31482060	(15227923)	C	MER21C	LTR/ERVL	(16)	922	133	2401437
1923	17.8	1.8	5.7	chr21	31569740	31569830	(15140153)	C	MLT1B	LTR/ERVL-MaLR	(301)	89	1	2401617
1983	15.7	0.3	0.3	chr21	31569886	31570185	(15139798)	+	AluJb	SINE/Alu	3	302	(10)	2401619
1879	17.7	0.6	0.9	chr21	32443714	32444044	(14265939)	C	MER21-int	LTR/ERVL	(3861)	330	1	2403211
46	0.0	0.0	0.0	chr21	32444054	32444092	(14265891)	+	(AC)n	Simple_repeat	1	39	(0)	2403212
4375	17.4	5.4	1.4	chr21	32444093	32444915	(14265068)	C	MER21B	LTR/ERVL	(11)	857	2	2403211
473	30.2	14.3	2.7	chr21	41178743	41179150	(5530833)	C	L2a	LINE/L2	(22)	3404	2942	2417083
279	19.0	1.7	0.0	chr21	41970755	41970812	(4739171)	+	MER91A	DNA/hAT-Tip100	12	70	(126)	2418250
1876	27.2	6.5	3.0	chr21	44732633	44733377	(1976606)	C	MER21C	LTR/ERVL	(3)	935	127	2422087
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
530	23.4	6.1	1.9	chr22	11572555	11572711	(39245757)	+	MIRb	SINE/MIR	33	196	(72)	2425189
1118	10.7	0.3	0.1	chr22	11814559	11816405	(39002063)	C	ACRO1	Satellite/acro	(55)	1851	1	2425389
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
1249	21.0	6.5	1.2	chr22	11896731	11897053	(38921415)	C	L1MB8	LINE/L1	(5)	6173	5833	2425507
2301	14.0	7.0	0.5	chr22	11897054	11897465	(38921003)	C	MER61C	LTR/ERV1	(0)	428	4	2425508
1124	22.8	3.2	0.8	chr22	11900617	11900862	(38917606)	C	AluJr	SINE/Alu	(48)	264	13	2425511
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
2074	11.1	0.0	4.8	chr22	22555994	22556308	(28262160)	C	AluSq	SINE/Alu	(13)	300	1	2437076
3724	14.2	1.2	2.8	chr22	23046303	23046912	(27771556)	C	MER57-int	LTR/ERV1	(5587)	600	1	2437695
342	4.5	0.0	0.0	chr22	23046913	23046956	(27771512)	C	MER57B1	LTR/ERV1	(0)	401	358	2437695
24584	9.5	2.2	0.6	chr22	23046972	23052748	(27765720)	+	L1PB1	LINE/L1	251	6867	(0)	2437701
225	33.8	8.3	3.7	chr22	25494309	25494368	(25324100)	+	L2b	LINE/L2	2929	2991	(384)	2442325
2310	11.6	0.0	1.6	chr22	25494369	25494686	(25323782)	C	AluSp	SINE/Alu	(0)	313	1	2442326
2218	11.5	0.0	0.0	chr22	29583598	29583910	(21234558)	+	AluSq2	SINE/Alu	1	313	(0)	2450918
1916	10.1	1.3	7.5	chr22	29583911	29584091	(21234377)	+	AluSx	SINE/Alu	137	298	(14)	2450917
225	31.0	5.4	2.2	chr22	29584264	29584352	(21234116)	C	L2c	LINE/L2	(252)	3135	3044	2450919
244	33.2	10.5	3.0	chr22	29584324	29584376	(21234092)	+	L3	LINE/CR1	3741	3795	(304)	2450920
2099	11.2	1.0	0.3	chr22	29584377	29584681	(21233787)	+	AluSz6	SINE/Alu	1	307	(5)	2450921
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
2095	16.6	0.0	0.0	chr22	43190981	43191288	(7627180)	+	AluJb	SINE/Alu	1	308	(4)	2479791
1788	18.5	4.6	7.3	chr22	43191289	43191336	(7627132)	+	MER65C	LTR/ERV1	418	454	(7)	2479788
697	25.8	14.4	1.6	chr22	44388764	44389066	(6429402)	+	MLT1E2	LTR/ERVL-MaLR	272	619	(8)	2481877
243	30.1	1.2	0.0	chr22	44389172	44389254	(6429214)	C	MIRc	SINE/MIR	(144)	124	41	2481880
35	4.6	2.2	0.0	chr22	45117454	45117498	(5700970)	+	(TAAAACTA)n	Simple_repeat	1	46	(0)	2483283
1997	12.2	1.9	2.7	chr22	45117500	45117647	(5700821)	+	L1M4	LINE/L1	5037	5183	(963)	2483284
2205	11.6	11.7	3.6	chr22	45117648	45117997	(5700471)	+	MSTA	LTR/ERVL-MaLR	1	394	(34)	2483285
180	29.8	14.4	3.7	chr22	47560702	47560837	(3257631)	C	MIRc	SINE/MIR	(66)	202	50	2487046
2173	12.2	0.3	0.3	chr22	47662955	47663250	(3155218)	+	AluSx1	SINE/Alu	1	296	(16)	2487191
1388	25.8	4.4	3.2	chr22	48597970	48598377	(2220091)	C	MLT2D	LTR/ERVL	(0)	414	2	2488424
1940	25.2	6.2	6.8	chr22	48598607	48599368	(2219100)	C	MER21B	LTR/ERVL	(61)	807	51	2488425
1943	11.9	2.5	0.0	chr22	49707868	49708178	(1110290)	C	MER21-int	LTR/ERVL	(3872)	319	1	2489657
4705	16.6	3.2	2.9	chr22	49708182	49709043	(1109425)	C	MER21B	LTR/ERVL	(3)	865	1	2489657
1667	20.7	10.5	1.4	chr3	5365746	5366167	(192929392)	+	MLT1C	LTR/ERVL-MaLR	3	467	(0)	2500725
2230	16.2	11.0	4.3	chr3	5366168	5366529	(192929030)	+	MER77B	LTR/ERVL	305	693	(7)	2500724
204	33.6	6.7	2.3	chr3	8537563	8537690	(189757869)	+	MIR3	SINE/MIR	52	185	(23)	2505532
3798	14.2	4.5	0.3	chr3	14079726	14080369	(184215190)	C	MER57-int	LTR/ERV1	(6865)	672	1	2516271
3001	9.4	3.7	0.0	chr3	14080370	14080785	(184214774)	C	MER57A1	LTR/ERV1	(0)	432	1	2516271
421	28.4	5.7	8.6	chr3	26462628	26462974	(171832585)	+	LTR81B	LTR/Gypsy	863	1290	(60)	2534722
208	29.2	5.3	0.0	chr3	39152296	39152367	(159143192)	C	L2b	LINE/L2	(541)	2878	2803	2554040
12	33.5	1.4	2.7	chr3	39152612	39152685	(159142874)	+	(GTGTGG)n	Simple_repeat	1	75	(0)	2554041
16	22.9	0.0	7.6	chr3	39152889	39152954	(159142605)	+	(TCCC)n	Simple_repeat	1	66	(0)	2554042
17	16.3	0.0	0.0	chr3	42072554	42072589	(156222970)	+	(TTTTTC)n	Simple_repeat	1	36	(0)	2558500
2477	7.4	0.0	0.0	chr3	42078472	42078769	(156216790)	+	AluY	SINE/Alu	1	298	(13)	2558512
26	0.0	0.0	0.0	chr3	42078770	42078794	(156216765)	+	(AAAG)n	Simple_repeat	1	25	(0)	2558513
1485	22.7	7.7	11.7	chr3	42078795	42079213	(156216346)	+	MLT1E2	LTR/ERVL-MaLR	216	626	(1)	2558511
2217	11.7	0.7	0.7	chr3	42079472	42079779	(156215780)	C	AluSx1	SINE/Alu	(3)	309	2	2558514
4808	17.3	4.0	3.9	chr3	42576439	42577687	(155717872)	+	L1MD2	LINE/L1	4707	5966	(784)	2559323
428	27.7	2.1	1.4	chr3	44140652	44140790	(154154769)	+	MIR	SINE/MIR	3	142	(120)	2561644
1353	20.9	8.5	0.0	chr3	44140858	44141115	(154154444)	C	AluJo	SINE/Alu	(30)	282	1	2561645
2367	21.2	9.1	1.8	chr3	44141117	44141717	(154153842)	C	MER77B	LTR/ERVL	(51)	649	1	2561646
990	18.9	4.3	1.0	chr3	48111387	48111589	(150183970)	+	MER21B	LTR/ERVL	654	863	(5)	2568702
5103	20.7	3.5	1.4	chr3	48111615	48111859	(150183700)	+	MER21-int	LTR/ERVL	2	250	(3941)	2568702
7740	11.4	2.2	1.6	chr3	50694842	50695795	(147599764)	C	MER57A-int	LTR/ERV1	(5213)	974	1	2573422
1713	12.1	0.4	0.0	chr3	50695796	50696035	(147599524)	C	MER57B1	LTR/ERV1	(0)	401	161	2573422
6855	9.6	1.2	2.3	chr3	50788900	50789719	(147505840)	C	L1PB1	LINE/L1	(2921)	3941	3134	2573571
1776	17.9	0.3	2.6	chr3	50789720	50790032	(147505527)	C	AluSz6	SINE/Alu	(6)	306	1	2573577
6855	12.7	2.1	2.7	chr3	50790033	50790807	(147504752)	C	L1PB1	LINE/L1	(3729)	3133	2308	2573571
229	32.2	1.1	4.4	chr3	55282496	55282586	(143012973)	+	MER117	DNA/hAT-Charlie	89	176	(21)	2580210
3121	22.2	4.8	3.4	chr3	55282680	55283106	(143012453)	C	MER21C	LTR/ERVL	(33)	905	456	2580211
205	28.3	7.3	6.2	chr3	58075356	58075517	(140220042)	C	L2c	LINE/L2	(272)	3115	2952	2585337
2302	12.5	0.0	0.0	chr3	63852869	63853179	(134442380)	+	AluSz	SINE/Alu	1	311	(1)	2594787
1596	13.2	9.0	4.9	chr3	66226474	66226760	(132068799)	C	AluJr4	SINE/Alu	(12)	300	1	2598948
2459	18.2	16.6	0.4	chr3	66226842	66227664	(132067895)	C	Tigger6a	DNA/TcMar-Tigger	(116)	967	1	2598949
595	26.6	3.3	7.3	chr3	71611775	71611993	(126683566)	+	MIRb	SINE/MIR	12	221	(47)	2607505
892	16.0	1.9	10.1	chr3	73339304	73339540	(124956019)	C	MER20	DNA/hAT-Charlie	(2)	217	1	2611052
4081	18.7	5.1	0.8	chr3	75405646	75406465	(122889094)	+	MER21B	LTR/ERVL	1	857	(11)	2614148
12535	23.6	5.5	4.5	chr3	75406489	75406568	(122888991)	+	MER21-int	LTR/ERVL	1	81	(4110)	2614148
2332	9.1	0.3	0.0	chr3	75406569	75406864	(122888695)	+	AluY	SINE/Alu	1	297	(14)	2614149
320	21.9	0.0	9.6	chr3	75668819	75668954	(122626605)	C	LSAU	Satellite	(374)	124	2	2614560
2403	14.8	1.2	10.5	chr3	75770986	75771462	(122524097)	+	MER57A1	LTR/ERV1	1	432	(0)	2614692
294	19.0	1.7	0.0	chr3	75771539	75771596	(122523963)	+	MER57-int	LTR/ERV1	27	85	(6102)	2614692
4352	19.7	5.5	1.3	chr3	75771603	75772849	(122522710)	+	MER52A	LTR/ERV1	1	1755	(0)	2614693
493	28.6	4.6	7.7	chr3	77062365	77062610	(121232949)	C	MER57A-int	LTR/ERV1	(5947)	240	3	2616397
573	26.5	2.9	1.2	chr3	77062791	77062958	(121232601)	C	MER57E1	LTR/ERV1	(197)	175	5	2616397
1884	22.4	4.4	3.0	chr3	94066898	94067458	(104228101)	+	MER77	LTR/ERVL	3	600	(4)	2633781
547	21.2	10.8	0.7	chr3	94067634	94067791	(104227768)	C	MIR	SINE/MIR	(8)	260	79	2633782
1634	19.4	1.3	1.3	chr3	94292345	94292657	(104002902)	+	MER65C	LTR/ERV1	147	459	(2)	2634120
6189	9.0	1.4	2.2	chr3	100540801	100541516	(97754043)	C	L1P4	LINE/L1	(479)	5687	4992	2641881
1821	17.9	0.0	0.7	chr3	100541517	100541796	(97753763)	C	AluJb	SINE/Alu	(0)	312	35	2641882
2291	16.4	0.8	1.3	chr3	105487906	105488300	(92807259)	+	MSTB1	LTR/ERVL-MaLR	1	393	(39)	2648334
195	27.9	0.0	3.2	chr3	112090144	112090206	(86205353)	C	MER5B	DNA/hAT-Charlie	(4)	174	114	2657373
221	18.2	4.3	0.0	chr3	112090200	112090243	(86205316)	C	MER5B	DNA/hAT-Charlie	(132)	46	1	2657373
1182	16.7	1.6	0.5	chr3	112090288	112090473	(86205086)	C	AluJr	SINE/Alu	(4)	308	121	2657374
180	32.3	5.7	2.9	chr3	112090510	112090611	(86204948)	+	L3b	LINE/CR1	4904	5008	(224)	2657375
342	26.2	7.3	0.8	chr3	119590531	119590654	(78704905)	C	MIRb	SINE/MIR	(43)	165	37	2667849
4430	17.2	6.2	4.2	chr3	119590669	119591576	(78703983)	C	MER21C	LTR/ERVL	(10)	928	2	2667850
303	24.4	17.3	0.0	chr3	123305056	123305170	(74990389)	+	MIRc	SINE/MIR	3	141	(127)	2673494
210	38.5	2.7	0.0	chr3	123433970	123434078	(74861481)	+	Tigger19a	DNA/TcMar-Tigger	137	248	(75)	2673691
23	32.5	1.0	2.9	chr3	124361778	124361878	(73933681)	+	(TGG)n	Simple_repeat	1	102	(0)	2675177
17	14.4	6.1	1.9	chr3	124361908	124361956	(73933603)	+	(CCTCTT)n	Simple_repeat	1	52	(0)	2675178
2533	9.9	4.7	2.0	chr3	125419026	125419415	(72876144)	+	MER57B1	LTR/ERV1	1	401	(0)	2676980
11752	10.7	3.4	4.0	chr3	125419416	125420061	(72875498)	+	MER57A-int	LTR/ERV1	1	640	(5547)	2676980
13	16.6	0.0	0.0	chr3	128726204	128726230	(69569329)	+	(GGC)n	Simple_repeat	1	27	(0)	2682345
4239	17.7	5.3	1.1	chr3	130072083	130072900	(68222659)	+	MER21B	LTR/ERVL	1	854	(14)	2684959
29	0.0	0.0	0.0	chr3	130072903	130072927	(68222632)	+	(TG)n	Simple_repeat	1	25	(0)	2684960
12408	23.4	5.6	4.5	chr3	130072935	130073014	(68222545)	+	MER21-int	LTR/ERVL	1	81	(4110)	2684959
2325	9.5	0.0	0.0	chr3	130073015	130073308	(68222251)	+	AluY	SINE/Alu	1	294	(17)	2684961
274	27.7	11.3	7.2	chr3	130604559	130604710	(67690849)	+	L2b	LINE/L2	3231	3420	(6)	2685727
183	28.1	4.3	4.3	chr3	130604887	130604979	(67690580)	+	L2c	LINE/L2	2767	2859	(560)	2685728
378	36.9	4.7	3.9	chr3	130604997	130605377	(67690182)	+	L2c	LINE/L2	2932	3315	(72)	2685728
1492	25.5	2.2	3.6	chr3	136695937	136696404	(61599155)	C	MER65C	LTR/ERV1	(0)	461	1	2694866
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
2083	12.2	11.6	0.0	chr3	142891279	142891613	(55403946)	C	THE1D	LTR/ERVL-MaLR	(2)	379	1	2704855
753	23.3	4.4	1.7	chr3	142891811	142891985	(55403574)	+	Tigger18a	DNA/TcMar-Tigger	26	205	(647)	2704856
456	12.9	0.0	0.0	chr3	150851118	150851187	(47444372)	C	LTR54	LTR/ERV1	(0)	510	441	2715947
982	15.5	14.6	0.5	chr3	150851190	150851377	(47444182)	C	MER57A-int	LTR/ERV1	(5966)	221	3	2715938
1997	20.2	1.2	8.1	chr3	150851382	150851615	(47443944)	C	MER57B2	LTR/ERV1	(1)	402	173	2715938
2553	8.9	0.0	0.3	chr3	150851616	150851918	(47443641)	+	AluY	SINE/Alu	1	302	(9)	2715948
2592	22.2	10.1	3.7	chr3	155401572	155402409	(42893150)	C	MER21C	LTR/ERVL	(40)	898	1	2722453
46	0.0	0.0	0.0	chr3	155771018	155771056	(42524503)	+	(TG)n	Simple_repeat	1	39	(0)	2722966
297	16.7	0.0	0.0	chr3	155771057	155771098	(42524461)	C	AluYg6	SINE/Alu	(29)	282	241	2722967
18	4.2	4.0	0.0	chr3	155771099	155771123	(42524436)	+	(TG)n	Simple_repeat	1	26	(0)	2722968
1816	18.4	0.0	2.1	chr3	155771124	155771272	(42524287)	C	AluJb	SINE/Alu	(30)	282	134	2722969
1714	18.5	5.0	0.3	chr3	155771273	155771558	(42524001)	C	AluSz	SINE/Alu	(4)	308	9	2722970
4052	21.4	2.3	2.1	chr3	162604244	162605006	(35690553)	+	L1PA14	LINE/L1	2861	3636	(3037)	2732800
1280	18.3	10.6	2.6	chr3	162605014	162605361	(35690198)	+	THE1D	LTR/ERVL-MaLR	3	381	(0)	2732804
15950	11.8	1.9	1.4	chr3	169814785	169816660	(28478899)	C	L1M1	LINE/L1	(1141)	6424	4539	2741853
8896	20.5	3.9	1.3	chr3	173537520	173539375	(24756184)	C	ERVL-B4-int	LTR/ERVL	(316)	5398	3289	2747690
910	24.5	2.2	6.4	chr3	193612772	193613054	(4682505)	C	MER57A-int	LTR/ERV1	(5914)	273	3	2779759
452	15.3	1.2	6.6	chr3	193613059	193613149	(4682410)	C	MER57A1	LTR/ERV1	(0)	432	347	2779759
1412	12.2	1.9	0.0	chr3	193613149	193613352	(4682207)	C	MER57A1	LTR/ERV1	(224)	208	1	2779759
793	23.6	12.1	1.2	chr4	2548757	2548922	(187665633)	C	L1ME1	LINE/L1	(940)	5206	5026	2791781
2146	12.2	0.6	1.3	chr4	2548925	2549235	(187665320)	C	AluSz	SINE/Alu	(1)	311	3	2791788
499	20.9	1.9	9.5	chr4	2549246	2549384	(187665171)	C	L1MD	LINE/L1	(964)	5182	5055	2791789
2899	1.6	0.0	0.0	chr4	2549385	2549695	(187664860)	C	AluYa5	SINE/Alu	(0)	311	1	2791790
682	24.3	1.7	2.8	chr4	2993703	2993863	(187220692)	C	MIR	SINE/MIR	(51)	211	52	2792550
6158	17.6	6.7	2.2	chr4	3350712	3352370	(186862185)	C	MER65-int	LTR/ERV1	(2923)	1948	81	2793094
2580	13.2	3.4	2.0	chr4	3352453	3352891	(186861664)	C	MER65A	LTR/ERV1	(0)	445	1	2793094
638	30.1	13.9	3.8	chr4	4470425	4470983	(185743572)	C	L2c	LINE/L2	(2)	3385	2770	2794792
643	26.1	13.7	2.7	chr4	5814976	5815274	(184399281)	C	Arthur1	DNA/hAT-Tip100	(3605)	342	6	2797218
960	21.3	5.7	2.4	chr4	5815275	5815529	(184399026)	C	LTR48B	LTR/ERV1	(0)	644	381	2797219
258	34.0	12.6	2.1	chr4	8062055	8062294	(182152261)	+	L2b	LINE/L2	3017	3285	(90)	2801169
1850	12.2	9.4	0.0	chr4	8308522	8308799	(181905756)	C	AluSc8	SINE/Alu	(4)	307	1	2801568
260	28.9	3.5	2.4	chr4	8308800	8308842	(181905713)	+	MIR1_Amn	SINE/MIR	158	202	(28)	2801567
463	26.7	10.9	4.2	chr4	12661297	12661670	(177552885)	C	L1M4b	LINE/L1	(5931)	936	799	2808046
1348	20.3	4.2	0.3	chr4	12661780	12662076	(177552479)	C	MER77B	LTR/ERVL	(9)	691	383	2808047
2240	12.1	0.3	0.3	chr4	40948479	40948783	(149265772)	+	AluSx1	SINE/Alu	1	305	(7)	2853168
1666	16.1	4.2	4.8	chr4	40948784	40948916	(149265639)	+	AluJr	SINE/Alu	188	309	(3)	2853167
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
765	23.2	4.1	11.8	chr4	49510094	49510415	(140704140)	C	L1MB8	LINE/L1	(43)	6135	5840	2865174
69	6.2	0.0	0.0	chr4	49510486	49510569	(140703986)	+	(TCCT)n	Simple_repeat	1	84	(0)	2865175
2974	25.3	4.0	4.6	chr4	60755314	60756274	(129458281)	+	L1MCb	LINE/L1	1	955	(5090)	2878529
2098	13.9	0.7	0.0	chr4	61103853	61104153	(129110402)	C	AluSc8	SINE/Alu	(8)	303	1	2878963
14	19.4	2.3	2.3	chr4	75724900	75724942	(114489613)	+	G-rich	Low_complexity	1	44	(0)	2897949
19	15.8	0.0	0.0	chr4	77133701	77133737	(113080818)	+	(TGCC)n	Simple_repeat	1	37	(0)	2900423
238	33.8	4.2	8.1	chr4	80984072	80984245	(109230310)	C	LTR78	LTR/ERV1	(276)	1028	862	2905497
368	32.4	2.6	6.9	chr4	80984557	80984715	(109229840)	C	LTR78	LTR/ERV1	(896)	408	257	2905497
2372	14.7	2.7	3.6	chr4	86507746	86508190	(103706365)	+	MER65A	LTR/ERV1	1	441	(4)	2913946
5722	20.5	9.4	8.5	chr4	86508201	86508787	(103705768)	+	MER65-int	LTR/ERV1	11	629	(4242)	2913946
2307	20.2	7.6	0.8	chr4	93033138	93033642	(97180913)	C	MER77B	LTR/ERVL	(3)	697	156	2923067
608	26.2	6.3	0.5	chr4	95063789	95064072	(95150483)	+	L1ME3Cz	LINE/L1	15	322	(602)	2925954
1299	20.6	1.0	3.1	chr4	95064135	95064222	(95150333)	+	L1MB8	LINE/L1	5090	5177	(969)	2925955
1782	18.5	1.2	1.2	chr4	95064223	95064561	(95149994)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	2925956
564	16.0	0.3	0.0	chr4	105334157	105334252	(84880303)	+	FLAM_C	SINE/Alu	7	87	(46)	2939300
1691	16.2	1.8	1.1	chr4	105334258	105334535	(84880020)	+	AluJb	SINE/Alu	30	309	(3)	2939301
2458	13.0	0.3	0.5	chr4	107980550	107980935	(82233620)	+	MER57C1	LTR/ERV1	1	385	(0)	2942777
782	21.5	3.9	2.8	chr4	107980939	107981193	(82233362)	+	MER31-int	LTR/ERV1	3	296	(5891)	2942777
350	30.9	6.9	4.1	chr4	123618034	123618229	(66596326)	+	L2	LINE/L2	2261	2462	(957)	2964279
2986	22.1	9.6	5.1	chr4	123618236	123619112	(66595443)	C	MER21C	LTR/ERVL	(18)	920	1	2964280
203	26.9	4.0	11.2	chr4	124904075	124904208	(65310347)	+	MamTip2	DNA/hAT-Tip100	2	125	(180)	2965887
1893	17.8	0.3	5.2	chr4	132928933	132929317	(57285238)	C	MLT1B	LTR/ERVL-MaLR	(2)	388	23	2976390
284	36.7	5.5	3.4	chr4	142361881	142362143	(47852412)	C	L2c	LINE/L2	(10)	3365	3118	2988858
1799	17.3	0.4	0.4	chr4	146290586	146290899	(43923656)	+	AluJr	SINE/Alu	9	312	(0)	2994115
3139	23.6	9.6	2.5	chr4	154006575	154007418	(36207137)	+	MER21C	LTR/ERVL	4	913	(25)	3005472
2421	16.9	5.5	0.7	chr4	156913242	156913694	(33300861)	+	LTR06	LTR/ERV1	1	476	(0)	3009413
256	29.3	4.7	4.7	chr4	156913962	156914133	(33300422)	+	MER101-int	LTR/ERV1	532	703	(5936)	3009414
274	32.5	5.8	4.1	chr4	162381617	162381786	(27832769)	+	HAL1	LINE/L1	1	173	(2334)	3016641
1777	13.3	0.7	10.7	chr4	162381787	162382133	(27832422)	+	AluJo	SINE/Alu	1	312	(0)	3016642
760	21.4	10.1	6.8	chr4	165515254	165515613	(24698942)	+	MER77B	LTR/ERVL	1	410	(290)	3021217
791	16.8	5.5	3.4	chr4	165515644	165515822	(24698733)	+	MER77B	LTR/ERVL	506	688	(12)	3021217
745	34.8	5.7	2.4	chr4	167842163	167842536	(22372019)	+	LTR86B2	LTR/ERVL	54	440	(47)	3024081
467	28.9	6.0	0.0	chr4	167842577	167842718	(22371837)	C	MIR	SINE/MIR	(110)	152	2	3024082
18	18.5	2.3	0.0	chr4	167842813	167842855	(22371700)	+	(CATA)n	Simple_repeat	1	44	(0)	3024083
823	21.7	0.5	1.6	chr4	186237671	186237862	(3976693)	C	L1PB4	LINE/L1	(2)	6154	5965	3049384
2550	6.4	0.0	0.3	chr4	186718387	186718669	(3495886)	+	AluSc	SINE/Alu	1	282	(27)	3050029
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
12	16.9	0.0	5.4	chr5	485759	485795	(181052464)	+	(CTGGCT)n	Simple_repeat	1	37	(0)	3055461
769	29.1	3.0	0.0	chr5	14132220	14132446	(167405813)	+	LTR33	LTR/ERVL	1	234	(281)	3071840
301	32.0	7.5	7.0	chr5	14574837	14575076	(166963183)	C	L2c	LINE/L2	(114)	3273	3029	3072366
2148	13.1	1.0	1.0	chr5	14659544	14659833	(166878426)	C	AluJb	SINE/Alu	(11)	301	12	3072502
2584	14.8	4.5	5.1	chr5	14659834	14660211	(166878048)	C	L1MC3	LINE/L1	(130)	7655	7270	3072501
2381	12.5	0.0	0.0	chr5	37253888	37254190	(144284069)	+	AluSx1	SINE/Alu	1	303	(9)	3104103
2194	15.2	10.1	1.2	chr5	37254191	37254589	(144283670)	+	MER65A	LTR/ERV1	8	445	(0)	3104104
890	25.5	20.0	6.5	chr5	37254677	37255097	(144283162)	+	MER65-int	LTR/ERV1	83	571	(4300)	3104104
1851	28.1	7.0	3.9	chr5	38185166	38186030	(143352229)	+	L1ME3E	LINE/L1	5298	6185	(57)	3105708
2758	18.8	3.2	2.9	chr5	38632117	38632670	(142905589)	+	MER21A	LTR/ERVL	376	931	(0)	3106417
704	26.7	7.5	0.5	chr5	38632672	38632893	(142905366)	+	MER21-int	LTR/ERVL	2	240	(2750)	3106417
6196	15.4	1.2	1.7	chr5	38632730	38633763	(142904496)	+	MER4B-int	LTR/ERV1	3085	4112	(2646)	3106419
2426	9.7	0.3	0.0	chr5	43400803	43401111	(138137148)	+	AluSx3	SINE/Alu	1	310	(1)	3113047
396	29.3	14.4	4.3	chr5	56264982	56265216	(125273043)	+	MIRb	SINE/MIR	6	268	(0)	3124761
28	0.0	0.0	0.0	chr5	56265457	56265483	(125272776)	+	(TTCA)n	Simple_repeat	1	27	(0)	3124762
2187	11.8	3.4	0.0	chr5	56265484	56265771	(125272488)	C	AluSz6	SINE/Alu	(14)	298	1	3124763
1978	12.1	5.6	1.4	chr5	76304518	76304850	(105233409)	C	MLT1A1	LTR/ERVL-MaLR	(4)	424	51	3154788
326	25.8	12.8	2.6	chr5	78839048	78839207	(102699052)	C	MIRb	SINE/MIR	(59)	171	1	3158687
16679	19.4	2.5	2.6	chr5	85919962	85924659	(95613600)	+	L1PREC2	LINE/L1	835	5692	(2449)	3169089
22744	13.4	4.4	3.5	chr5	92829707	92835766	(88702493)	C	L1PA10	LINE/L1	(233)	6250	10	3177939
717	31.5	14.8	2.6	chr5	93669958	93670455	(87867804)	+	L2	LINE/L2	2443	3011	(408)	3178933
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
4338	12.6	1.4	2.4	chr5	106535765	106535989	(75002270)	C	L1PA13	LINE/L1	(508)	5655	5437	3195260
18563	14.3	2.0	1.7	chr5	123839137	123842434	(57695825)	+	L1PA15	LINE/L1	2908	6198	(588)	3217897
2329	14.5	5.6	6.2	chr5	126650422	126650869	(54887390)	+	MER65A	LTR/ERV1	1	445	(0)	3221629
1987	25.9	10.1	9.6	chr5	126650925	126651654	(54886605)	+	MER65-int	LTR/ERV1	61	835	(4036)	3221629
1222	21.6	6.9	3.7	chr5	136881732	136882135	(44656124)	+	Charlie4a	DNA/hAT-Charlie	14	431	(77)	3236234
714	20.3	3.2	0.0	chr5	136882344	136882496	(44655763)	+	MER33	DNA/hAT-Charlie	1	158	(166)	3236235
244	30.6	1.8	2.7	chr5	145623485	145623595	(35914664)	+	L1ME3F	LINE/L1	4746	4855	(1291)	3250991
14	13.1	0.0	0.0	chr5	145623596	145623621	(35914638)	+	(GATA)n	Simple_repeat	1	26	(0)	3250998
41	4.5	0.0	0.0	chr5	145623622	145623668	(35914591)	+	(TAGGTAGG)n	Simple_repeat	1	47	(0)	3250999
2809	25.6	2.6	1.7	chr5	145623769	145624518	(35913741)	C	MER21C	LTR/ERVL	(39)	899	143	3251000
18	0.0	0.0	0.0	chr5	146069490	146069511	(35468748)	+	(TGC)n	Simple_repeat	1	22	(0)	3251810
335	26.9	0.0	12.2	chr5	146069528	146069568	(35468691)	C	MIRc	SINE/MIR	(74)	194	161	3251811
1969	16.1	0.0	0.3	chr5	146069569	146069873	(35468386)	C	AluJb	SINE/Alu	(8)	304	1	3251812
19	19.9	3.9	0.0	chr5	149731600	149731651	(31806608)	+	G-rich	Low_complexity	1	54	(0)	3258411
427	21.2	4.2	8.1	chr5	151368328	151368450	(30169809)	+	LTR06	LTR/ERV1	359	476	(0)	3261741
222	28.6	4.5	1.2	chr5	159987820	159987904	(21550355)	C	L2a	LINE/L2	(34)	3392	3305	3277132
2204	18.6	2.6	9.8	chr5	159987906	159988448	(21549811)	+	MLT1D	LTR/ERVL-MaLR	1	503	(2)	3277133
1262	18.7	0.5	1.4	chr5	159988696	159988904	(21549355)	+	AluJr4	SINE/Alu	1	207	(105)	3277134
36	19.8	1.1	2.2	chr5	170861784	170861873	(10676386)	+	(CGCCC)n	Simple_repeat	1	91	(0)	3294424
905	16.0	6.2	2.2	chr5	172451381	172451565	(9086694)	+	MER20	DNA/hAT-Charlie	27	219	(0)	3297468
198	27.0	6.6	0.0	chr5	172451587	172451650	(9086609)	C	MIR3	SINE/MIR	(125)	143	76	3297469
713	26.0	7.3	0.4	chr5	173713525	173713752	(7824507)	C	Charlie8	DNA/hAT-Charlie	(2163)	265	21	3300118
287	30.9	9.3	5.3	chr5	173713852	173713984	(7824275)	+	MIR3	SINE/MIR	5	143	(65)	3300119
8898	11.9	0.5	0.7	chr5	174123113	174125147	(7413112)	C	L1PB3	LINE/L1	(162)	5992	3961	3300904
383	32.9	3.8	3.2	chr5	174125198	174125402	(7412857)	C	MIRb	SINE/MIR	(48)	220	19	3300907
1779	20.5	12.0	0.0	chr5	174125598	174126001	(7412258)	+	MLT1C	LTR/ERVL-MaLR	1	459	(8)	3300908
205	29.9	7.2	6.7	chr5	175343951	175344129	(6194130)	C	L2c	LINE/L2	(188)	3199	3020	3303271
2240	22.0	5.7	2.6	chr5	175344141	175344752	(6193507)	C	MER77	LTR/ERVL	(17)	683	1	3303273
237	31.0	1.2	3.5	chr5	175593859	175593945	(5944314)	+	MER5B	DNA/hAT-Charlie	6	90	(88)	3303715
299	25.7	6.0	6.0	chr5	175593948	175594063	(5944196)	+	MamRep1879	DNA/hAT-Tip100?	86	201	(15)	3303716
252	30.1	9.4	3.8	chr5	175594190	175594610	(5943649)	+	L2a	LINE/L2	627	1073	(1023)	3303717
1274	15.2	12.3	1.9	chr5	176381154	176381414	(5156845)	C	MER57A-int	LTR/ERV1	(5893)	294	3	3305126
1421	18.0	13.5	1.8	chr5	176381418	176381750	(5156509)	C	MER57C1	LTR/ERV1	(0)	385	8	3305126
656	30.8	7.7	0.4	chr5	176585068	176585295	(4952964)	+	MIRb	SINE/MIR	23	268	(0)	3305604
465	30.9	6.7	0.0	chr5	176585387	176585567	(4952692)	C	MIR	SINE/MIR	(2)	260	67	3305605
240	20.0	7.1	0.0	chr5	176585597	176585661	(4952598)	+	MIRb	SINE/MIR	55	124	(144)	3305606
1057	25.8	4.3	1.1	chr5	177008650	177008916	(4529343)	+	MLT1F2	LTR/ERVL-MaLR	1	276	(284)	3306404
590	23.3	9.3	3.3	chr5	177008911	177009005	(4529254)	+	MLT1F2	LTR/ERVL-MaLR	395	502	(58)	3306404
1880	15.8	2.0	1.3	chr5	177009006	177009308	(4528951)	C	AluJo	SINE/Alu	(7)	305	1	3306405
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
1162	28.7	8.1	7.5	chr6	226749	227426	(170578553)	C	MER21C	LTR/ERVL	(129)	809	128	3314547
279	31.6	7.2	11.5	chr6	1816199	1816459	(168989520)	C	MIRb	SINE/MIR	(15)	253	5	3316611
1323	21.4	10.0	1.1	chr6	3184165	3184518	(167621461)	+	MER77B	LTR/ERVL	304	692	(8)	3318528
1402	26.4	4.7	4.0	chr6	3184531	3184979	(167621000)	+	MER21-int	LTR/ERVL	2	453	(3738)	3318528
2446	8.4	0.0	0.0	chr6	3474725	3475021	(167330958)	C	AluSc8	SINE/Alu	(14)	297	1	3318946
313	25.7	7.4	1.7	chr6	3475263	3475377	(167330602)	+	Charlie4z	DNA/hAT-Charlie	39	160	(7)	3318947
1777	19.8	3.0	3.0	chr6	3479875	3480260	(167325719)	C	MLT1B-int	LTR/ERVL-MaLR	(831)	540	1	3318957
1169	21.4	7.9	13.9	chr6	3480261	3480569	(167325410)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	112	3318957
2303	11.2	0.0	0.3	chr6	3480570	3480874	(167325105)	C	AluSz	SINE/Alu	(8)	304	1	3318959
4735	24.3	4.0	3.7	chr6	6690254	6691533	(164114446)	+	ERV3-16A3_I-int	LTR/ERVL	1733	3017	(2209)	3323765
587	24.6	0.0	9.0	chr6	6691529	6691684	(164114295)	+	ERV3-16A3_I-int	LTR/ERVL	3239	3380	(1846)	3323765
3180	24.0	9.6	4.0	chr6	6691689	6692621	(164113358)	+	FordPrefect	DNA/hAT-Tip100	408	1398	(285)	3323766
10443	20.7	5.2	5.9	chr6	9790928	9793121	(161012858)	+	L1MDb	LINE/L1	3356	5640	(897)	3328549
7799	26.4	7.0	4.9	chr6	19372426	19375232	(151430747)	+	ERV3-16A3_I-int	LTR/ERVL	2357	5226	(0)	3344346
2277	12.7	0.0	0.9	chr6	27602220	27602534	(143203445)	C	AluSx1	SINE/Alu	(0)	312	1	3357201
595	0.0	0.0	22.2	chr6	27602568	27602675	(143203304)	C	tRNA-Leu-TTG	tRNA	(2)	84	1	3357202
590	0.0	0.0	22.9	chr6	27605637	27605745	(143200234)	C	tRNA-Leu-TTG	tRNA	(2)	84	1	3357208
624	1.2	0.0	20.8	chr6	28941053	28941158	(141864821)	+	tRNA-Leu-TTG	tRNA	1	84	(2)	3359510
2989	15.6	4.4	6.1	chr6	31350433	31351055	(139454924)	C	LTR9	LTR/ERV1	(0)	612	1	3363203
650	31.7	4.8	6.6	chr6	31351056	31351340	(139454639)	+	MLT1N2	LTR/ERVL-MaLR	185	457	(105)	3363202
189	35.0	1.9	2.8	chr6	37015128	37015233	(133790746)	+	MIR1_Amn	SINE/MIR	30	134	(96)	3373732
481	7.2	5.5	0.0	chr6	66684296	66684364	(104121615)	+	MER57A1	LTR/ERV1	359	431	(1)	3414592
3033	15.2	1.2	0.0	chr6	66684366	66684839	(104121140)	+	MER57-int	LTR/ERV1	1	480	(7057)	3414592
4125	19.4	3.4	4.0	chr6	75275755	75276623	(95529356)	+	MER21B	LTR/ERVL	1	863	(5)	3425976
1096	25.4	9.9	1.9	chr6	75276634	75277104	(95528875)	+	L2a	LINE/L2	2744	3259	(167)	3425974
1966	19.9	6.7	1.4	chr6	79461090	79461651	(91344328)	C	MER77B	LTR/ERVL	(17)	683	2	3431264
2334	11.2	0.0	0.0	chr6	106938502	106938805	(63867174)	+	AluSq2	SINE/Alu	1	304	(9)	3467788
1874	9.4	0.8	0.8	chr6	107955207	107955461	(62850518)	C	AluSx1	SINE/Alu	(57)	255	1	3469651
331	26.7	10.4	6.5	chr6	107955462	107955498	(62850481)	+	MIRc	SINE/MIR	171	206	(62)	3469650
1915	14.0	1.1	0.0	chr6	107955604	107955916	(62850063)	+	AluSz	SINE/Alu	1	312	(0)	3469652
195	30.7	2.6	1.3	chr6	110042744	110042819	(60763160)	C	MamTip2	DNA/hAT-Tip100	(37)	268	192	3473077
2779	10.5	11.4	0.0	chr6	110042835	110043261	(60762718)	+	MER51E	LTR/ERV1	1	482	(0)	3473078
866	24.0	2.2	7.9	chr6	112208368	112208607	(58597372)	C	MIR	SINE/MIR	(35)	227	2	3476775
931	35.0	9.8	2.7	chr6	116291623	116292601	(54513378)	C	L2c	LINE/L2	(556)	2863	1808	3482360
344	29.7	6.8	5.6	chr6	116292675	116292977	(54513002)	+	L1ME4a	LINE/L1	5728	6034	(90)	3482362
9576	25.5	7.2	9.7	chr6	117615892	117618640	(53187339)	+	HERVIP10FH-int	LTR/ERV1	25	2647	(2455)	3484142
276	30.7	9.2	4.5	chr6	118265386	118265799	(52540180)	C	L2b	LINE/L2	(146)	3241	2517	3484940
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
1605	20.8	11.1	4.7	chr6	122170708	122171262	(48634717)	+	L1MB7	LINE/L1	2938	3532	(2614)	3490066
2240	22.7	6.1	4.0	chr6	122171272	122171849	(48634130)	+	LTR75B	LTR/ERVL	4	594	(14)	3490067
1652	24.2	9.8	6.5	chr6	122171850	122172578	(48633401)	+	L1MB7	LINE/L1	3537	4292	(1854)	3490066
37	2.3	0.0	0.0	chr6	123778595	123778628	(47027351)	+	(TG)n	Simple_repeat	1	34	(0)	3492154
49	4.8	3.1	0.0	chr6	123778629	123778693	(47027286)	+	(TGTC)n	Simple_repeat	1	67	(0)	3492155
37	2.3	0.0	0.0	chr6	123778694	123778704	(47027275)	+	(TG)n	Simple_repeat	1	11	(0)	3492156
296	36.4	2.7	4.0	chr6	123778709	123778934	(47027045)	+	L2-3_Crp	LINE/L2	756	978	(1118)	3492157
15314	12.9	1.6	0.7	chr6	125151313	125153651	(45652328)	+	Tigger1	DNA/TcMar-Tigger	55	2416	(2)	3493929
329	31.8	11.6	1.1	chr6	125740187	125740364	(45065615)	C	MIRb	SINE/MIR	(46)	222	24	3494752
843	12.1	0.8	0.0	chr6	125740365	125740496	(45065483)	C	L1PB1	LINE/L1	(1)	6150	6018	3494753
1867	14.1	6.8	1.7	chr6	126755683	126756043	(44049936)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3495989
4111	14.3	0.5	0.0	chr6	126756044	126756659	(44049320)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1013	3495989
2060	13.7	2.0	0.0	chr6	127755758	127756056	(43049923)	+	AluSz	SINE/Alu	8	312	(0)	3497271
234	31.4	4.1	3.3	chr6	130331831	130331952	(40474027)	C	L2a	LINE/L2	(243)	3183	3061	3500786
1066	33.0	19.4	1.1	chr6	130331952	130333044	(40472935)	C	L2a	LINE/L2	(591)	2828	1471	3500786
767	31.7	11.6	2.3	chr6	131931976	131932314	(38873665)	+	L2	LINE/L2	2482	2864	(555)	3503131
2196	12.5	0.0	0.0	chr6	131932315	131932609	(38873370)	C	AluSx	SINE/Alu	(16)	296	2	3503132
286	27.7	11.0	10.7	chr6	134043103	134043438	(36762541)	+	LTR85c	LTR/Gypsy?	476	812	(11)	3506072
2490	10.5	0.3	0.0	chr6	134043513	134043817	(36762162)	+	AluSc	SINE/Alu	1	306	(3)	3506073
802	14.1	0.6	17.8	chr6	136823413	136823603	(33982376)	+	FRAM	SINE/Alu	1	158	(18)	3510539
35768	11.5	3.2	2.0	chr6	137377843	137377941	(33428038)	C	MER57A-int	LTR/ERV1	(6088)	99	1	3511377
2198	17.0	3.5	0.0	chr6	137377942	137378330	(33427649)	C	MER57B2	LTR/ERV1	(0)	403	1	3511377
565	31.0	16.1	2.8	chr6	137968770	137969234	(32836745)	C	L2	LINE/L2	(832)	2587	2049	3512276
2185	11.2	0.3	1.9	chr6	138158792	138159137	(32646842)	C	AluSx	SINE/Alu	(0)	312	2	3512555
811	18.3	0.0	0.0	chr6	138159198	138159328	(32646651)	C	FLAM_C	SINE/Alu	(12)	131	1	3512556
650	28.6	10.8	3.2	chr6	138159333	138159802	(32646177)	C	L1ME4a	LINE/L1	(296)	5828	5319	3512557
1448	19.2	1.9	11.1	chr6	140452687	140452822	(30353157)	+	AluJb	SINE/Alu	1	126	(186)	3516059
1834	18.3	0.0	3.1	chr6	140452823	140453144	(30352835)	+	AluJb	SINE/Alu	1	312	(0)	3516060
1448	19.2	1.9	11.1	chr6	140453145	140453351	(30352628)	+	AluJb	SINE/Alu	127	312	(0)	3516059
372	34.8	5.7	3.1	chr6	143213222	143213461	(27592518)	C	L2c	LINE/L2	(1)	3374	3150	3519541
2230	12.5	0.0	0.7	chr6	143213489	143213816	(27592163)	C	AluSx1	SINE/Alu	(0)	312	1	3519542
1459	19.2	11.6	3.0	chr6	149498232	149498537	(21307442)	+	L1MD1	LINE/L1	4861	5205	(941)	3528546
1823	15.0	1.6	1.6	chr6	149498538	149498844	(21307135)	+	AluJr	SINE/Alu	1	307	(5)	3528549
2113	21.6	7.0	4.2	chr6	153941532	153942173	(16863806)	C	MER77B	LTR/ERVL	(39)	661	1	3535584
462	30.1	9.2	5.8	chr6	157505535	157505996	(13299983)	+	CR1_Mam	LINE/CR1	1165	1643	(561)	3541025
373	27.6	2.2	0.0	chr6	157506304	157506390	(13299589)	+	MIR3	SINE/MIR	120	208	(0)	3541026
868	21.1	13.6	5.4	chr6	157557930	157558225	(13247754)	C	MER33	DNA/hAT-Charlie	(0)	324	1	3541103
327	16.8	19.6	7.8	chr6	157571812	157571927	(13234052)	+	LTR82B	LTR/ERVL	529	661	(169)	3541122
657	16.7	0.8	5.3	chr6	157571985	157572117	(13233862)	C	MER5A1	DNA/hAT-Charlie	(38)	128	2	3541123
1009	23.0	0.9	0.0	chr6	157572127	157572343	(13233636)	C	MER20	DNA/hAT-Charlie	(0)	219	1	3541124
708	28.9	13.4	5.5	chr6	158447854	158448270	(12357709)	C	LTR86B1	LTR/ERVL	(0)	493	39	3542555
28	17.5	2.3	5.7	chr6	160991642	160991727	(9814252)	+	(CGC)n	Simple_repeat	1	88	(0)	3546054
2325	17.2	2.8	1.6	chr6	166797343	166797767	(4008212)	C	Tigger2a	DNA/TcMar-Tigger	(1)	433	4	3553638
2398	14.6	1.8	4.8	chr6	166914032	166914490	(3891489)	+	MER65A	LTR/ERV1	1	445	(0)	3553765
388	35.6	4.6	3.7	chr6	168614431	168615747	(2190232)	+	TAR1	Satellite/telo	1	1328	(552)	3555632
1460	24.0	6.4	0.8	chr6	169430966	169431335	(1374644)	+	MER65C	LTR/ERV1	70	461	(0)	3556444
323	33.1	6.0	7.9	chr7	2431545	2431849	(156914124)	C	L1MDa	LINE/L1	(6001)	632	334	3561388
722	21.3	4.7	4.2	chr7	2431852	2432042	(156913931)	C	MER77	LTR/ERVL	(15)	685	494	3561401
1081	5.5	0.0	0.0	chr7	2432045	2432171	(156913802)	+	AluYc	SINE/Alu	173	299	(0)	3561402
3482	20.6	4.4	1.0	chr7	3455929	3457062	(155888911)	C	L1MD2	LINE/L1	(4658)	1975	790	3563322
758	30.1	3.2	0.4	chr7	3457065	3457341	(155888632)	C	L1MD2	LINE/L1	(6008)	532	248	3563322
2437	7.8	0.0	4.0	chr7	4563560	4563880	(154782093)	+	AluSx1	SINE/Alu	1	308	(4)	3565109
997	29.0	6.9	4.5	chr7	4563881	4564003	(154781970)	+	L1MDb	LINE/L1	438	571	(5969)	3565108
1720	25.6	7.4	7.4	chr7	4564042	4564394	(154781579)	+	L1MDb	LINE/L1	654	1023	(5517)	3565108
2155	10.0	2.0	2.7	chr7	4564395	4564694	(154781279)	+	AluSx4	SINE/Alu	1	298	(12)	3565110
401	36.4	9.8	5.7	chr7	25928163	25928978	(133416995)	+	L2c	LINE/L2	2543	3382	(5)	3596126
1484	23.6	14.0	3.6	chr7	30307912	30308412	(129037561)	C	L1ME3B	LINE/L1	(19)	6223	5652	3602956
550	25.7	7.4	4.9	chr7	30308413	30308596	(129037377)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	3602957
1484	23.6	14.0	3.6	chr7	30308597	30308767	(129037206)	C	L1ME3B	LINE/L1	(591)	5651	5469	3602956
431	32.0	5.7	6.5	chr7	30322429	30322873	(129023100)	C	MLT1M	LTR/ERVL-MaLR	(184)	488	48	3602980
7189	13.8	3.4	1.3	chr7	30951798	30953278	(128392695)	C	THE1C-int	LTR/ERVL-MaLR	(4)	1627	6	3603914
1728	23.1	4.7	14.4	chr7	30953283	30953899	(128392074)	C	MLT2B3	LTR/ERVL	(0)	554	1	3603915
755	20.2	6.4	0.6	chr7	32950219	32950381	(126395592)	+	AluJb	SINE/Alu	140	312	(0)	3607064
1027	23.5	5.6	3.8	chr7	32950387	32950700	(126395273)	C	LTR52	LTR/ERVL	(101)	320	1	3607065
4998	9.5	1.5	4.1	chr7	33173590	33174344	(126171629)	C	MER57A-int	LTR/ERV1	(5452)	735	1	3607471
2660	11.7	2.0	0.5	chr7	33174345	33174739	(126171234)	C	MER57B1	LTR/ERV1	(0)	401	1	3607471
298	33.6	7.4	8.7	chr7	33735433	33735882	(125610091)	+	L2c	LINE/L2	2921	3364	(23)	3608290
2017	20.3	12.5	5.3	chr7	34092973	34093613	(125252360)	C	MER77B	LTR/ERVL	(6)	694	1	3608820
661	29.2	6.8	4.1	chr7	43265060	43265453	(116080520)	C	MLT1I	LTR/ERVL-MaLR	(7)	404	36	3622375
347	20.2	1.2	0.0	chr7	43265478	43265556	(116080417)	+	MADE2	DNA/TcMar-Mariner	1	80	(0)	3622376
2469	24.2	7.2	8.5	chr7	43265577	43266321	(116079652)	C	MER21C	LTR/ERVL	(22)	916	175	3622377
876	27.7	2.4	2.0	chr7	53805623	53805869	(105540104)	C	MER21-int	LTR/ERVL	(3926)	265	18	3636667
1261	30.6	10.1	4.9	chr7	53805877	53806504	(105539469)	C	MER21C	LTR/ERVL	(75)	863	200	3636667
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
533	27.5	14.8	4.7	chr7	67034496	67035110	(92310863)	C	L1ME4b	LINE/L1	(125)	767	80	3651384
2196	12.4	1.0	0.0	chr7	67035117	67035415	(92310558)	C	AluSz	SINE/Alu	(10)	302	1	3651385
892	22.0	7.0	0.5	chr7	67035430	67035673	(92310300)	C	MER77B	LTR/ERVL	(159)	772	447	3651386
2241	11.7	0.3	0.0	chr7	67035677	67035976	(92309997)	C	AluSc8	SINE/Alu	(10)	301	1	3651387
312	32.8	1.4	2.8	chr7	71517663	71517803	(87828170)	C	L2a	LINE/L2	(1)	3425	3287	3660368
294	27.4	13.4	4.6	chr7	71517975	71518211	(87827762)	C	L2a	LINE/L2	(356)	3063	2803	3660368
447	25.6	10.7	0.0	chr7	72758235	72758351	(86587622)	+	FLAM_A	SINE/Alu	1	131	(11)	3663005
321	20.9	9.5	0.0	chr7	72758362	72758447	(86587526)	+	MER65A	LTR/ERV1	323	417	(28)	3663003
694	26.9	19.6	4.4	chr7	72758568	72759047	(86586926)	+	MER65-int	LTR/ERV1	71	625	(4246)	3663003
1511	14.5	3.8	0.0	chr7	73641020	73641246	(85704727)	+	AluJb	SINE/Alu	1	236	(76)	3665129
337	27.2	8.1	2.6	chr7	73641316	73641432	(85704541)	+	MIRb	SINE/MIR	86	209	(59)	3665130
3232	21.1	4.0	4.5	chr7	73641586	73641632	(85704341)	C	MER21B	LTR/ERVL	(113)	755	711	3665131
2287	9.0	0.0	2.3	chr7	73641633	73641933	(85704040)	C	AluSg	SINE/Alu	(16)	294	1	3665132
1998	14.2	0.0	2.6	chr7	74518598	74518899	(84827074)	+	AluJr	SINE/Alu	1	294	(18)	3667288
344	30.9	7.9	0.0	chr7	74519161	74519312	(84826661)	+	MIRc	SINE/MIR	25	189	(79)	3667289
1130	7.3	1.3	1.3	chr7	74519970	74520119	(84825854)	+	AluJo	SINE/Alu	163	312	(0)	3667290
635	25.2	2.7	1.8	chr7	74520291	74520480	(84825493)	+	MIRb	SINE/MIR	3	201	(67)	3667291
2053	13.2	4.5	1.6	chr7	79538040	79538409	(79807564)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3676925
10730	17.5	3.6	3.5	chr7	83121160	83121825	(76224148)	+	L1MA3	LINE/L1	3190	3857	(3708)	3681845
9317	13.6	2.4	2.0	chr7	83121815	83122276	(76223697)	+	L1MA3	LINE/L1	5059	5511	(2054)	3681845
12149	18.0	5.8	4.6	chr7	92279285	92280933	(67065040)	C	MER68-int	LTR/ERVL	(1322)	1668	3	3693633
2951	18.9	2.5	1.6	chr7	92280940	92281487	(67064486)	C	MER68	LTR/ERVL	(4)	559	7	3693633
1950	10.9	1.9	0.0	chr7	97127898	97128162	(62217811)	C	AluSx1	SINE/Alu	(7)	305	36	3700306
241	25.9	3.4	5.6	chr7	97348503	97348592	(61997381)	+	L2c	LINE/L2	2545	2632	(787)	3700645
386	31.1	16.3	4.0	chr7	97348584	97348784	(61997189)	C	MIRb	SINE/MIR	(30)	238	1	3700646
307	31.4	4.8	4.1	chr7	97348785	97348918	(61997055)	+	L2c	LINE/L2	3245	3379	(8)	3700645
303	25.3	0.0	14.2	chr7	97349001	97349106	(61996867)	+	L2c	LINE/L2	3289	3379	(8)	3700647
1313	20.1	4.2	0.7	chr7	98511624	98511923	(60834050)	+	MER77B	LTR/ERVL	362	672	(28)	3702776
283	31.0	4.2	0.0	chr7	98511963	98512075	(60833898)	+	L1MC4	LINE/L1	6614	6731	(1311)	3702777
451	27.0	3.3	3.3	chr7	98512174	98512353	(60833620)	C	MamRep564	Unknown	(109)	248	69	3702778
2336	20.4	4.4	1.3	chr7	98689144	98689719	(60656254)	+	MER77	LTR/ERVL	9	652	(48)	3703160
2119	12.7	4.4	5.2	chr7	98689720	98690086	(60655887)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3703161
1876	23.4	5.1	2.2	chr7	98690087	98690124	(60655849)	+	MER77	LTR/ERVL	653	689	(11)	3703160
2016	18.4	1.8	0.3	chr7	98711316	98711697	(60634276)	+	MLT1B	LTR/ERVL-MaLR	1	388	(2)	3703223
400	10.8	0.2	2.5	chr7	98810993	98811637	(60534336)	+	(TGG)n	Simple_repeat	1	646	(0)	3703453
1989	7.7	0.0	5.2	chr7	98926745	98927016	(60418957)	+	AluSx1	SINE/Alu	23	280	(32)	3703717
2454	8.6	0.0	0.0	chr7	100042037	100042338	(59303635)	+	AluSx1	SINE/Alu	1	302	(10)	3705736
1313	17.9	7.8	2.1	chr7	100042393	100042683	(59303290)	C	MER21C	LTR/ERVL	(17)	921	613	3705737
19	26.4	2.0	0.0	chr7	100042684	100042734	(59303239)	+	(TA)n	Simple_repeat	1	52	(0)	3705738
12	20.2	0.0	6.7	chr7	101154370	101154414	(58191559)	+	G-rich	Low_complexity	1	45	(0)	3708121
15	27.6	0.0	4.5	chr7	101154651	101154716	(58191257)	+	G-rich	Low_complexity	1	66	(0)	3708122
937	13.5	0.0	1.5	chr7	101833118	101833250	(57512723)	+	FLAM_C	SINE/Alu	2	132	(11)	3709769
1895	15.5	0.6	4.3	chr7	101833268	101833589	(57512384)	+	AluJo	SINE/Alu	2	311	(1)	3709770
31	0.0	0.0	0.0	chr7	106101439	106101467	(53244506)	+	(C)n	Simple_repeat	1	29	(0)	3717099
2488	12.2	0.3	0.0	chr7	118920440	118920791	(40425182)	+	MER57B1	LTR/ERV1	45	397	(4)	3734557
23018	12.8	3.6	5.1	chr7	118920800	118921226	(40424747)	+	MER57A-int	LTR/ERV1	1	429	(5758)	3734557
2480	11.1	0.8	0.0	chr7	118921227	118921578	(40424395)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3734558
742	18.1	0.0	5.9	chr7	123322976	123323128	(36022845)	C	MER54B	LTR/ERVL	(490)	303	160	3740267
3016	21.3	12.9	4.1	chr7	123323204	123324016	(36021957)	C	MER21C	LTR/ERVL	(39)	899	4	3740270
2513	13.3	1.5	8.0	chr7	124956863	124957083	(34388890)	C	MER4C	LTR/ERV1	(0)	465	248	3742531
2275	13.8	0.8	0.8	chr7	124957084	124957447	(34388526)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3742532
3995	15.0	3.8	0.6	chr7	125457398	125458039	(33887934)	C	MER57-int	LTR/ERV1	(6874)	663	1	3743142
2548	16.1	0.5	0.0	chr7	125458040	125458469	(33887504)	C	MER57A1	LTR/ERV1	(0)	432	1	3743142
408	27.6	11.5	1.0	chr7	135316996	135317212	(24028761)	+	MIR	SINE/MIR	12	251	(11)	3758741
1601	16.4	5.7	1.1	chr7	138617567	138617834	(20728139)	+	AluJr	SINE/Alu	1	281	(31)	3763931
271	30.2	7.7	0.0	chr7	138617869	138617964	(20728009)	+	MER5A	DNA/hAT-Charlie	84	187	(2)	3763932
545	20.9	9.7	5.4	chr7	139095770	139095936	(20250037)	+	MER5B	DNA/hAT-Charlie	4	178	(0)	3764908
271	31.4	8.8	0.8	chr7	140883325	140883449	(18462524)	C	CR1_Mam	LINE/CR1	(1729)	475	340	3768345
2079	17.7	4.7	1.4	chr7	149319536	149319965	(10026008)	+	MER65A	LTR/ERV1	1	445	(0)	3780509
910	22.9	6.9	2.9	chr7	149320018	149320296	(10025677)	+	MER101-int	LTR/ERV1	58	348	(4523)	3780509
578	33.7	9.1	5.4	chr7	153653799	153654187	(5691786)	C	L3	LINE/CR1	(8)	4091	3687	3787226
292	24.9	3.0	1.9	chr7	153654236	153654398	(5691575)	+	LTR109A2	LTR/ERV1	264	431	(0)	3787227
625	27.7	12.9	1.1	chr7	155192873	155193233	(4152740)	+	MLT1D	LTR/ERVL-MaLR	95	504	(1)	3789331
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
586	20.3	2.6	0.0	chr7	159075343	159075490	(270483)	+	LTR109A2	LTR/ERV1	239	390	(29)	3794057
392	19.2	17.5	2.7	chr7	159335074	159335241	(10732)	C	L1MC	LINE/L1	(2239)	5546	5354	3794334
2278	19.5	0.8	1.9	chr7	159335248	159335741	(10232)	+	TAR1	Satellite/telo	1	488	(313)	3794336
298	28.3	9.4	0.9	chr8	6811022	6811128	(138327508)	C	MIR3	SINE/MIR	(34)	174	58	3802630
546	21.0	2.4	5.3	chr8	28012439	28012569	(117126067)	C	MER5B	DNA/hAT-Charlie	(48)	130	4	3835386
2417	13.5	4.5	8.5	chr8	40751189	40751633	(104387003)	C	MSTA	LTR/ERVL-MaLR	(2)	426	1	3855855
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
255	30.7	11.9	9.3	chr8	60891159	60891524	(84247112)	C	MLT1N2	LTR/ERVL-MaLR	(143)	419	43	3879834
211	38.6	16.5	4.0	chr8	60891577	60891951	(84246685)	C	L2c	LINE/L2	(8)	3379	2949	3879837
6967	17.6	17.6	1.4	chr8	63669325	63670792	(81467844)	C	MER52A	LTR/ERV1	(0)	1755	1	3883539
3129	27.7	7.1	2.2	chr8	63670793	63671091	(81467545)	C	L1MD3	LINE/L1	(3693)	2453	2161	3883534
4051	27.7	10.5	2.9	chr8	65847097	65849228	(79289408)	+	HAL1	LINE/L1	1	2321	(186)	3886509
1567	14.5	0.3	11.1	chr8	66792599	66792922	(78345714)	+	AluJo	SINE/Alu	3	291	(21)	3888108
12	25.7	0.0	0.0	chr8	68261709	68261745	(76876891)	+	(TTTA)n	Simple_repeat	1	37	(0)	3890463
14	18.4	0.0	0.0	chr8	68261826	68261856	(76876780)	+	A-rich	Low_complexity	1	31	(0)	3890464
936	14.9	0.7	0.0	chr8	80155163	80155310	(64983326)	+	Tigger1	DNA/TcMar-Tigger	231	379	(2039)	3907116
3840	15.9	9.0	2.7	chr8	80704372	80705152	(64433484)	+	MER21B	LTR/ERVL	1	835	(33)	3908254
99	31.8	1.0	2.7	chr8	80705266	80705671	(64432965)	+	(GT)n	Simple_repeat	1	410	(0)	3908255
4150	14.7	2.5	0.3	chr8	87260748	87261383	(57877253)	C	MER57-int	LTR/ERV1	(6887)	650	1	3917183
2742	12.8	0.5	3.6	chr8	87261384	87261828	(57876808)	C	MER57A1	LTR/ERV1	(0)	432	2	3917183
628	27.4	3.2	2.8	chr8	102991211	102991456	(42147180)	C	MER57A-int	LTR/ERV1	(5891)	296	3	3941543
698	20.2	3.9	1.7	chr8	102991461	102991636	(42147000)	C	MER57D	LTR/ERV1	(0)	411	232	3941543
181	35.6	1.0	0.0	chr8	123952196	123952296	(21186340)	C	MIR	SINE/MIR	(126)	136	35	3972842
1952	17.2	3.0	6.7	chr8	124358340	124358756	(20779880)	+	MER57B2	LTR/ERV1	3	403	(0)	3973557
5814	14.1	6.3	3.5	chr8	124358757	124359475	(20779161)	+	MER57A-int	LTR/ERV1	1	765	(5422)	3973557
2261	18.8	0.7	2.2	chr8	133306367	133306817	(11831819)	+	MER65A	LTR/ERV1	1	444	(1)	3990174
6869	22.6	6.2	7.3	chr8	133306896	133309591	(11829045)	+	MER65-int	LTR/ERV1	73	2494	(2377)	3990174
344	30.9	4.9	3.2	chr8	133359602	133359776	(11778860)	C	MIRb	SINE/MIR	(80)	188	4	3990284
244	31.7	6.8	3.9	chr8	133360161	133360288	(11778348)	C	MIRb	SINE/MIR	(15)	253	122	3990285
1869	10.7	5.4	0.4	chr8	135859821	135860108	(9278528)	C	AluSc	SINE/Alu	(0)	309	1	3994700
327	30.3	12.6	0.2	chr8	135860109	135860274	(9278362)	C	MIRb	SINE/MIR	(69)	199	8	3994701
2204	11.9	0.0	1.9	chr8	135860512	135860821	(9277815)	C	AluSp	SINE/Alu	(9)	304	1	3994702
1078	14.0	0.2	0.5	chr8	143669231	143669438	(1469198)	C	LTR10B1	LTR/ERV1	(55)	492	240	4006487
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
983	19.0	4.8	0.0	chr8	144233153	144233368	(905268)	C	L1MB3	LINE/L1	(3)	6180	5954	4007362
1068	22.4	3.6	0.7	chr8	144233505	144233801	(904835)	C	L1MB3	LINE/L1	(183)	6000	5695	4007363
13	13.1	9.1	2.1	chr9	3525431	3525474	(134869243)	+	(GCTCCC)n	Simple_repeat	1	48	(0)	4013732
24	31.9	0.0	1.2	chr9	3525641	3525723	(134868994)	+	(CA)n	Simple_repeat	1	83	(0)	4013733
31	12.9	3.4	0.0	chr9	3525764	3525843	(134868874)	+	GA-rich	Low_complexity	1	82	(0)	4013734
389	17.3	10.3	1.4	chr9	19237760	19237899	(119156818)	C	MER33	DNA/hAT-Charlie	(1)	323	170	4035938
660	26.0	2.0	5.8	chr9	19237900	19238071	(119156646)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	301	4035939
2400	10.0	0.3	0.0	chr9	19238072	19238381	(119156336)	C	AluSp	SINE/Alu	(2)	311	1	4035940
11	11.1	6.9	0.0	chr9	21832550	21832578	(116562139)	+	(CTTCCC)n	Simple_repeat	1	31	(0)	4039766
252	25.0	7.3	6.2	chr9	21832864	21832944	(116561773)	C	MIR3	SINE/MIR	(19)	189	108	4039767
595	34.8	2.4	1.0	chr9	23666692	23666894	(114727823)	C	MIRb	SINE/MIR	(24)	244	39	4042173
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
15	5.6	0.0	0.0	chr9	61856982	61857000	(76537717)	+	(TG)n	Simple_repeat	1	19	(0)	4072477
23	25.6	1.7	0.0	chr9	61857000	61857059	(76537658)	+	(TC)n	Simple_repeat	1	61	(0)	4072478
1951	29.4	5.2	6.5	chr9	61857061	61858378	(76536339)	+	SST1	Satellite/centr	262	1562	(1)	4072479
235	23.8	4.5	3.8	chr9	63823016	63823908	(74570809)	+	(CA)n	Simple_repeat	1	933	(0)	4074777
2605	29.9	5.1	4.7	chr9	65388281	65390272	(73004445)	+	SST1	Satellite/centr	1	2001	(859)	4076190
3833	18.6	3.9	0.5	chr9	68966000	68966738	(69427979)	+	L1MC3	LINE/L1	6850	7614	(171)	4080706
2253	10.5	0.3	0.0	chr9	72423409	72423694	(65971023)	C	AluSq2	SINE/Alu	(26)	287	1	4086501
8251	22.4	6.0	6.1	chr9	74231324	74234202	(64160515)	C	MER65-int	LTR/ERV1	(2379)	2492	7	4089092
2439	16.3	0.9	4.4	chr9	74234206	74234660	(64160057)	C	MER65A	LTR/ERV1	(2)	443	5	4089092
325	37.1	4.5	7.0	chr9	75020856	75021026	(63373691)	+	MIRb	SINE/MIR	32	196	(34)	4090386
1551	19.8	1.3	7.5	chr9	79832293	79832625	(58562092)	C	AluJr	SINE/Alu	(0)	312	1	4097820
5666	18.9	1.5	1.8	chr9	79832626	79833359	(58561358)	C	MSTB1-int	LTR/ERVL-MaLR	(314)	1337	607	4097819
12	14.0	4.4	6.4	chr9	79928721	79928765	(58465952)	+	(AGAGCC)n	Simple_repeat	1	47	(0)	4097945
220	21.9	4.5	1.5	chr9	79929284	79929348	(58465369)	+	MER5B	DNA/hAT-Charlie	94	160	(18)	4097946
4618	17.4	1.3	2.2	chr9	85034628	85035428	(53359289)	+	MER54B	LTR/ERVL	1	793	(0)	4105615
3395	25.5	13.2	6.3	chr9	88283322	88283918	(50110799)	+	HAL1	LINE/L1	10	647	(1860)	4110826
2275	10.9	0.0	3.4	chr9	88283919	88284240	(50110477)	C	AluSz6	SINE/Alu	(1)	311	1	4110827
2146	20.8	4.5	7.8	chr9	91346004	91346560	(47048157)	+	MER21C	LTR/ERVL	9	639	(299)	4115043
2668	21.6	10.4	5.1	chr9	91346588	91347035	(47047682)	C	MER21C	LTR/ERVL	(21)	917	432	4115044
599	28.0	7.2	9.5	chr9	92859242	92859568	(45535149)	+	L1MEf	LINE/L1	716	1034	(6299)	4117321
280	13.8	3.3	3.3	chr9	92859618	92859677	(45535040)	C	MER77B	LTR/ERVL	(41)	659	600	4117325
2739	17.8	7.7	8.6	chr9	92859701	92860307	(45534410)	C	MER77	LTR/ERVL	(3)	601	1	4117326
2159	11.5	3.3	0.3	chr9	95715026	95715320	(42679397)	C	AluSx	SINE/Alu	(8)	304	1	4121622
1460	27.7	4.2	0.5	chr9	95715343	95715773	(42678944)	+	MLT1J2	LTR/ERVL-MaLR	1	448	(0)	4121623
226	32.3	7.0	0.0	chr9	99411990	99412082	(38982635)	C	X6A_LINE	LINE/CR1	(931)	149	50	4128410
5914	24.6	3.1	2.9	chr9	105736172	105738568	(32656149)	C	L1M2a	LINE/L1	(4658)	2908	400	4137996
1770	21.6	8.3	5.4	chr9	107787752	107787941	(30606776)	C	L1ME3A	LINE/L1	(21)	6152	5957	4141586
2521	14.9	2.9	0.7	chr9	107787942	107788354	(30606363)	+	MSTB	LTR/ERVL-MaLR	5	426	(0)	4141587
16	29.8	5.1	1.9	chr9	110579855	110579952	(27814765)	+	(TCTCCC)n	Simple_repeat	1	103	(0)	4146504
5260	15.1	4.5	4.8	chr9	114045029	114046244	(24348473)	C	L1ME1	LINE/L1	(814)	5332	4121	4152860
229	34.2	7.0	2.8	chr9	116728694	116728940	(21665777)	+	L2b	LINE/L2	3097	3354	(21)	4157936
232	30.7	7.3	2.8	chr9	116729390	116729533	(21665184)	+	MIRc	SINE/MIR	102	252	(16)	4157937
538	23.0	9.3	0.0	chr9	116729556	116729681	(21665036)	+	MER58A	DNA/hAT-Charlie	85	223	(1)	4157938
738	20.4	11.6	3.9	chr9	124623906	124624135	(13770582)	C	MIR	SINE/MIR	(11)	251	2	4172930
1496	15.5	10.4	1.9	chr9	124722727	124722990	(13671727)	C	AluJb	SINE/Alu	(22)	290	2	4173108
1651	27.9	2.6	1.3	chr9	126901044	126901497	(11493220)	+	ERVL-E-int	LTR/ERVL	1897	2356	(3311)	4177272
1452	23.7	5.4	4.0	chr9	126901509	126901912	(11492805)	C	MER21C	LTR/ERVL	(20)	918	509	4177282
379	30.6	8.2	0.7	chr9	127288937	127289071	(11105646)	C	MER117	DNA/hAT-Charlie	(49)	148	3	4177938
2626	19.3	13.5	2.4	chr9	127289192	127289808	(11104909)	C	MER77B	LTR/ERVL	(4)	696	1	4177939
453	37.3	14.7	0.8	chr9	130495613	130496139	(7898578)	C	L2b	LINE/L2	(558)	2861	2249	4185124
1945	17.4	0.0	0.0	chr9	130496140	130496438	(7898279)	+	AluJr	SINE/Alu	2	300	(12)	4185129
2180	10.9	0.0	0.0	chrX	9742826	9743099	(146297796)	+	AluSz	SINE/Alu	2	275	(37)	4375256
2437	25.5	2.4	3.1	chrX	36265649	36266331	(119774564)	C	L1P4e	LINE/L1	(4958)	1333	656	4416148
977	30.7	4.5	5.2	chrX	36266390	36266832	(119774063)	C	L1P4e	LINE/L1	(5392)	899	460	4416149
3845	25.1	4.6	2.5	chrX	70190289	70191965	(85848930)	+	L1MA9	LINE/L1	819	2534	(4315)	4459290
2147	11.5	1.7	0.0	chrX	72155769	72156056	(83884839)	+	AluSx	SINE/Alu	2	294	(18)	4462795
1512	27.8	3.1	3.1	chrX	72156057	72156375	(83884520)	C	LTR16A	LTR/ERVL	(127)	324	1	4462794
2025	14.5	0.3	0.7	chrX	72156444	72156733	(83884162)	C	AluJr	SINE/Alu	(19)	293	5	4462796
40297	10.2	1.5	0.5	chrX	87349629	87353885	(68687010)	C	HERVL-int	LTR/ERVL	(5)	5649	1359	4479045
1494	35.5	6.6	9.7	chrX	89285925	89286665	(66754230)	C	L2	LINE/L2	(2016)	1403	669	4481245
2145	13.1	5.3	1.1	chrX	89286666	89287028	(66753867)	+	THE1D	LTR/ERVL-MaLR	1	379	(2)	4481246
2673	12.6	7.8	0.0	chrX	109561595	109562032	(46478863)	+	LTR06	LTR/ERV1	1	475	(1)	4507010
899	19.5	0.0	0.7	chrX	115274499	115274647	(40766248)	+	AluJr4	SINE/Alu	3	150	(162)	4515197
998	22.2	9.6	0.9	chrX	115274649	115274875	(40766020)	+	MSTB	LTR/ERVL-MaLR	1	249	(177)	4515198
1075	18.1	0.0	0.0	chrX	115274902	115275067	(40765828)	+	FRAM	SINE/Alu	1	166	(10)	4515199
261	20.7	0.0	0.0	chrX	115275077	115275134	(40765761)	C	L1MB8	LINE/L1	(6)	6172	6115	4515200
2569	6.0	0.3	0.0	chrX	117797066	117797363	(38243532)	+	AluY	SINE/Alu	1	299	(12)	4518168
556	29.4	13.9	2.9	chrX	135740757	135741176	(20299719)	+	LTR41	LTR/ERVL	127	600	(168)	4544767
306	31.2	5.4	5.4	chrX	137213796	137213869	(18827026)	C	L2a	LINE/L2	(134)	3292	3223	4547369
883	11.3	0.3	0.0	chrX	137213953	137214102	(18826793)	+	MER57A1	LTR/ERV1	245	426	(6)	4547372
3989	14.0	3.7	0.1	chrX	137214112	137214762	(18826133)	+	MER57-int	LTR/ERV1	1	675	(6862)	4547372
2356	15.8	0.4	15.3	chrX	147770549	147771085	(8269810)	C	LTR32	LTR/ERVL	(0)	457	1	4562386
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
780	10.9	0.5	0.6	chrY	11181817	11186194	(46041221)	+	CER	Satellite	1	4374	(0)	4588950
741	17.6	1.4	0.7	chrY	11186186	11186322	(46041093)	+	MLT1A0	LTR/ERVL-MaLR	226	363	(2)	4588951
4091	21.0	5.7	2.4	chrY	11204203	11205457	(46021958)	+	MER52A	LTR/ERV1	1	1755	(0)	4588979
1464	23.6	8.9	4.8	chrY	11281374	11281813	(45945602)	C	MER21C	LTR/ERVL	(22)	916	457	4589057
10957	28.1	0.5	0.1	chrY	26643208	26653351	(30574064)	+	(AATGG)n	Simple_repeat	1	10181	(0)	4607159