18	27.1	1.1	5.6	chr1	827542	827629	(248128793)	+	G-rich	Low_complexity	1	89	(0)	1063
32	0.0	0.0	0.0	chr1	2199392	2199421	(246757001)	+	(CCCAG)n	Simple_repeat	1	30	(0)	2989
761	28.8	11.8	4.3	chr1	2199627	2199797	(246756625)	+	MLT1C	LTR/ERVL-MaLR	4	182	(285)	2990
633	15.8	5.8	1.4	chr1	3650290	3650437	(245305985)	+	MER53	DNA/hAT	22	176	(17)	4182
11	21.3	4.4	2.1	chr1	6784676	6784720	(242171702)	+	(GCCGGC)n	Simple_repeat	1	47	(0)	8925
1815	16.4	0.0	0.4	chr1	9235630	9235909	(239720513)	C	AluJb	SINE/Alu	(31)	281	3	13220
322	34.1	10.6	5.3	chr1	11013213	11013515	(237942907)	+	L2c	LINE/L2	3066	3386	(1)	16859
298	28.6	0.0	5.8	chr1	12162379	12162482	(236793940)	C	MER5A1	DNA/hAT-Charlie	(36)	130	33	19292
1684	16.6	3.5	1.0	chr1	12539620	12539921	(236416501)	C	AluJr	SINE/Alu	(0)	312	3	19946
481	23.5	4.3	12.0	chr1	12539922	12539985	(236416437)	+	MLT1H1	LTR/ERVL-MaLR	492	545	(4)	19945
2261	10.5	1.0	0.0	chr1	16728032	16728327	(232228095)	+	AluSz	SINE/Alu	1	299	(13)	28016
271	27.2	1.0	7.9	chr1	17722957	17723111	(231233311)	C	MamGypLTR1d	LTR/Gypsy	(8)	805	643	30076
232	30.8	11.2	3.6	chr1	17723266	17723430	(231232992)	C	MamGypLTR2b	LTR/Gypsy	(576)	346	168	30077
791	33.8	12.6	1.9	chr1	20164611	20165540	(228790882)	+	L2a	LINE/L2	2365	3426	(0)	35216
63	30.7	0.6	0.0	chr1	20165669	20165842	(228790580)	+	(TG)n	Simple_repeat	1	175	(0)	35217
247	13.5	21.2	0.0	chr1	20165941	20165992	(228790430)	+	MIR	SINE/MIR	84	149	(113)	35218
1665	18.0	8.7	3.6	chr1	21018586	21018976	(227937446)	+	MSTB1	LTR/ERVL-MaLR	1	413	(19)	36978
1007	14.7	0.0	2.6	chr1	21019030	21019185	(227937237)	C	AluJo	SINE/Alu	(23)	289	138	36979
275	20.5	8.2	3.7	chr1	23598345	23598425	(225357997)	C	L2b	LINE/L2	(0)	3375	3291	42839
14	18.9	4.8	0.0	chr1	25859472	25859513	(223096909)	+	(CCGGCC)n	Simple_repeat	1	44	(0)	47960
12	27.7	3.1	3.0	chr1	25859514	25859535	(223096887)	+	(CCGCC)n	Simple_repeat	1	66	(0)	47961
2228	9.3	0.7	0.0	chr1	26408260	26408548	(222547874)	+	AluSz	SINE/Alu	1	291	(21)	49285
394	33.0	9.4	5.0	chr1	28502275	28502492	(220453930)	+	L2	LINE/L2	2001	2233	(1186)	54363
2096	11.2	0.3	1.0	chr1	28502493	28502803	(220453619)	+	AluSx	SINE/Alu	1	309	(3)	54364
13	8.9	0.0	3.9	chr1	28914599	28914624	(220041798)	+	(TCGC)n	Simple_repeat	1	26	(0)	55498
16	32.2	1.2	2.5	chr1	28914778	28914857	(220041565)	+	(GGC)n	Simple_repeat	1	81	(0)	55499
23	20.2	0.0	3.6	chr1	30856549	30856603	(218099819)	+	(AC)n	Simple_repeat	1	55	(0)	59235
219	23.3	0.0	0.0	chr1	31431426	31431468	(217524954)	C	MIR1_Amn	SINE/MIR	(74)	156	114	60676
403	6.7	0.0	0.0	chr1	31431749	31432232	(217524190)	+	(GATAGGGTG)n	Simple_repeat	1	484	(0)	60677
183	28.6	4.5	0.0	chr1	31855115	31855177	(217101245)	C	MIR	SINE/MIR	(117)	145	80	61475
15	11.7	0.0	0.0	chr1	32292241	32292268	(216664154)	+	(GGGCC)n	Simple_repeat	1	28	(0)	62539
29811	16.3	3.8	3.9	chr1	32413641	32415507	(216540915)	+	HUERS-P3b-int	LTR/ERV1	266	2141	(5277)	62818
16	26.6	3.7	3.5	chr1	32869923	32870004	(216086418)	+	(GAGACA)n	Simple_repeat	1	85	(0)	63921
12	11.1	0.0	8.6	chr1	32973105	32973139	(215983283)	+	(GCCCCC)n	Simple_repeat	1	35	(0)	64134
12	16.5	0.0	0.0	chr1	32973206	32973232	(215983190)	+	G-rich	Low_complexity	1	27	(0)	64135
22	12.8	0.0	0.0	chr1	32973436	32973469	(215982953)	+	(T)n	Simple_repeat	1	34	(0)	64136
24	5.7	0.0	2.6	chr1	34929735	34929773	(214026649)	+	(GAGAGG)n	Simple_repeat	1	39	(0)	67687
2368	17.3	1.4	9.7	chr1	35032693	35033249	(213923173)	C	LTR54	LTR/ERV1	(0)	510	1	67890
1984	20.3	5.4	1.2	chr1	35033250	35033618	(213922804)	C	L1ME3	LINE/L1	(490)	5672	5291	67889
1573	22.4	3.9	3.2	chr1	35033644	35034048	(213922374)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	67891
2194	10.5	0.7	1.3	chr1	35193860	35193996	(213762426)	+	AluSq2	SINE/Alu	1	135	(178)	68205
2416	7.3	0.0	1.0	chr1	35193997	35194297	(213762125)	+	AluSx4	SINE/Alu	1	298	(12)	68206
1629	19.7	0.3	3.9	chr1	36253595	36253904	(212702518)	C	AluJr	SINE/Alu	(13)	299	1	70503
4600	16.6	6.6	4.2	chr1	36253905	36254129	(212702293)	C	Cheshire	DNA/hAT-Charlie	(810)	1610	1385	70500
313	10.6	7.8	0.0	chr1	36254133	36254179	(212702243)	+	FRAM	SINE/Alu	106	156	(20)	70504
368	16.2	0.0	2.4	chr1	36254200	36254281	(212702141)	C	Cheshire	DNA/hAT-Charlie	(1185)	1235	1156	70500
1740	19.7	13.1	11.1	chr1	36254265	36254886	(212701536)	C	Cheshire	DNA/hAT-Charlie	(1781)	639	4	70505
1152	15.6	6.0	0.7	chr1	36728232	36728601	(212227821)	+	MLT2A2	LTR/ERVL	149	601	(0)	71453
1683	16.2	3.6	15.4	chr1	37892719	37893063	(211063359)	+	MLT1A0	LTR/ERVL-MaLR	1	305	(60)	73657
1752	15.1	3.9	1.1	chr1	37893064	37893384	(211063038)	C	AluJb	SINE/Alu	(0)	312	1	73658
1683	16.2	3.6	15.4	chr1	37893385	37893450	(211062972)	+	MLT1A0	LTR/ERVL-MaLR	306	364	(1)	73657
1206	22.0	8.2	6.5	chr1	40469228	40469397	(208487025)	+	HAL1	LINE/L1	1381	1563	(944)	78865
2050	16.2	0.7	1.0	chr1	40469398	40469700	(208486722)	+	AluJr	SINE/Alu	1	302	(10)	78872
1206	22.0	8.2	6.5	chr1	40469701	40469927	(208486495)	+	HAL1	LINE/L1	1564	1785	(722)	78865
379	29.7	4.1	5.9	chr1	40703129	40703207	(208253215)	+	MER102c	DNA/hAT-Charlie	71	149	(181)	79358
1897	14.5	4.0	1.0	chr1	40703208	40703497	(208252925)	+	AluJb	SINE/Alu	1	299	(13)	79359
379	29.5	3.9	6.0	chr1	40703498	40703625	(208252797)	+	MER102c	DNA/hAT-Charlie	132	256	(75)	79358
245	20.7	6.5	0.0	chr1	40792473	40792530	(208163892)	C	MIR3	SINE/MIR	(62)	146	85	79511
596	27.6	1.9	1.9	chr1	40792805	40792959	(208163463)	C	MIRb	SINE/MIR	(111)	157	3	79512
1509	22.8	7.6	11.1	chr1	41313571	41314074	(207642348)	C	MLT1H2	LTR/ERVL-MaLR	(4)	485	1	80557
2011	13.9	1.0	0.7	chr1	42025788	42026088	(206930334)	+	AluJb	SINE/Alu	1	302	(10)	81823
1292	29.8	9.5	8.2	chr1	42026089	42026370	(206930052)	C	L1MEd	LINE/L1	(6594)	509	222	81820
417	17.1	14.6	2.8	chr1	42657959	42658066	(206298356)	C	L2a	LINE/L2	(17)	3409	3287	82917
19	19.0	0.0	0.0	chr1	43358713	43358754	(205597668)	+	(GCCCC)n	Simple_repeat	1	42	(0)	84214
206	33.1	16.3	5.9	chr1	44119793	44120737	(204835685)	C	L2c	LINE/L2	(537)	2882	1821	85479
242	35.2	4.4	0.9	chr1	45011532	45011640	(203944782)	+	L2b	LINE/L2	2654	2766	(653)	87196
2140	9.3	3.7	0.0	chr1	45281646	45281934	(203674488)	+	AluSq2	SINE/Alu	1	300	(13)	87664
231	26.8	1.8	8.2	chr1	45282072	45282193	(203674229)	+	L2b	LINE/L2	3029	3142	(233)	87665
198	27.9	11.3	0.0	chr1	45803323	45803408	(203153014)	+	L2c	LINE/L2	3291	3387	(0)	88809
16	24.5	0.0	0.0	chr1	46718973	46719016	(202237406)	+	(CTCCGG)n	Simple_repeat	1	44	(0)	90530
20	14.9	0.0	0.0	chr1	46719037	46719073	(202237349)	+	(GGC)n	Simple_repeat	1	37	(0)	90531
1252	16.9	0.0	5.2	chr1	50874745	50875000	(198081422)	C	AluJb	SINE/Alu	(0)	312	81	97562
16	3.5	3.0	5.9	chr1	50875196	50875228	(198081194)	+	(ATTT)n	Simple_repeat	1	34	(0)	97563
2312	12.0	0.0	0.0	chr1	50928502	50928802	(198027620)	+	AluSx3	SINE/Alu	1	301	(10)	97648
1691	17.4	7.7	0.0	chr1	50928815	50929101	(198027321)	+	AluSx3	SINE/Alu	1	311	(0)	97649
17	15.0	4.3	2.1	chr1	50978056	50978101	(197978321)	+	G-rich	Low_complexity	1	48	(0)	97722
14	22.6	0.0	0.0	chr1	52142246	52142281	(196814141)	+	(AGC)n	Simple_repeat	1	36	(0)	100279
19	14.1	0.0	2.4	chr1	52552993	52553033	(196403389)	+	(CCGCCG)n	Simple_repeat	1	41	(0)	101091
38	25.3	0.8	2.5	chr1	52553102	52553219	(196403203)	+	G-rich	Low_complexity	1	119	(0)	101092
12	16.9	2.9	2.8	chr1	52843544	52843583	(196112839)	+	(GTCCC)n	Simple_repeat	1	40	(0)	101893
555	29.2	11.3	5.9	chr1	53108398	53108838	(195847584)	+	MLT1J	LTR/ERVL-MaLR	3	470	(42)	102462
371	30.1	5.0	2.2	chr1	54763837	54764042	(194192380)	C	MIRc	SINE/MIR	(50)	212	3	105839
346	29.9	4.3	5.4	chr1	54764061	54764226	(194192196)	+	MIR3	SINE/MIR	45	208	(0)	105840
188	33.5	5.5	10.1	chr1	54764221	54764409	(194192013)	C	MIRc	SINE/MIR	(72)	196	17	105841
1636	14.7	3.0	9.4	chr1	54944536	54944855	(194011567)	+	AluJb	SINE/Alu	1	299	(13)	106199
329	24.1	10.6	0.2	chr1	54944856	54944959	(194011463)	+	L2b	LINE/L2	3236	3398	(28)	106197
21135	10.1	1.1	0.6	chr1	56012813	56016966	(192939456)	+	L1PREC2	LINE/L1	3982	8154	(1)	108038
21	3.5	0.0	0.0	chr1	56578777	56578805	(192377617)	+	(CGGCG)n	Simple_repeat	1	29	(0)	109121
33	7.0	0.0	0.0	chr1	56579466	56579510	(192376912)	+	(CCTCCTGCT)n	Simple_repeat	1	45	(0)	109122
15	15.3	0.0	0.0	chr1	56579513	56579541	(192376881)	+	(TGC)n	Simple_repeat	1	29	(0)	109123
1919	15.2	0.0	4.5	chr1	56697013	56697321	(192259101)	C	AluJb	SINE/Alu	(15)	297	3	109343
1771	16.3	0.3	4.2	chr1	57698091	57698397	(191258025)	C	AluJr4	SINE/Alu	(17)	295	1	111343
22	23.5	2.6	3.8	chr1	57706225	57706302	(191250120)	+	(CTTC)n	Simple_repeat	1	80	(0)	111359
1608	18.7	2.6	4.2	chr1	57706303	57706612	(191249810)	C	AluJb	SINE/Alu	(5)	307	3	111360
2013	20.6	5.5	6.9	chr1	57706719	57706790	(191249632)	C	L1MD2	LINE/L1	(219)	6140	6073	111361
2456	8.4	0.0	0.3	chr1	57706791	57707099	(191249323)	+	AluSq	SINE/Alu	1	308	(5)	111362
364	34.3	5.1	3.8	chr1	57963365	57963576	(190992846)	+	L2c	LINE/L2	3167	3381	(6)	111879
531	23.9	11.2	5.5	chr1	57963817	57964051	(190992371)	C	UCON12	Unknown	(245)	275	26	111880
14	19.4	2.3	2.3	chr1	58546475	58546517	(190409905)	+	(TCCCC)n	Simple_repeat	1	44	(0)	113060
14	5.8	10.5	2.4	chr1	58816594	58816631	(190139791)	+	(CAGTCCT)n	Simple_repeat	1	42	(0)	113581
23	5.7	2.6	2.5	chr1	59297041	59297079	(189659343)	+	(CCT)n	Simple_repeat	1	40	(0)	114621
8298	12.1	0.9	2.8	chr1	61471996	61472538	(187483884)	C	HSMAR2	DNA/TcMar-Mariner	(37)	1265	736	118200
1812	19.0	0.3	0.3	chr1	61472539	61472843	(187483579)	C	AluJo	SINE/Alu	(6)	306	2	118202
12	17.6	4.0	5.8	chr1	63594013	63594062	(185362360)	+	(CTCTCC)n	Simple_repeat	1	52	(0)	122314
225	24.1	11.3	0.2	chr1	63773691	63773791	(185182631)	+	MIR3	SINE/MIR	38	149	(81)	122679
13	12.5	0.0	0.0	chr1	63773832	63773857	(185182565)	+	(GGAGG)n	Simple_repeat	1	26	(0)	122680
13	9.7	0.0	0.0	chr1	63774051	63774072	(185182350)	+	(GCC)n	Simple_repeat	1	22	(0)	122681
7916	17.0	1.1	1.3	chr1	65093906	65095431	(183860991)	C	L1M2	LINE/L1	(852)	6710	5189	125087
12	22.0	2.7	0.0	chr1	65148891	65148927	(183807495)	+	(CCGTACC)n	Simple_repeat	1	38	(0)	125213
23	23.6	1.1	5.6	chr1	65254442	65254529	(183701893)	+	(GCG)n	Simple_repeat	1	89	(0)	125433
17	26.4	3.4	4.4	chr1	65309246	65309333	(183647089)	+	(CCCT)n	Simple_repeat	1	91	(0)	125552
14	4.3	4.2	0.0	chr1	65309511	65309534	(183646888)	+	(CTCC)n	Simple_repeat	1	25	(0)	125553
19	4.5	0.0	0.0	chr1	65419562	65419584	(183536838)	+	(T)n	Simple_repeat	1	23	(0)	125758
774	31.4	9.1	1.9	chr1	65722534	65723068	(183233354)	+	L2a	LINE/L2	2840	3417	(9)	126193
426	31.1	8.4	13.4	chr1	66475844	66476374	(182480048)	C	LTR33A	LTR/ERVL	(16)	504	3	127295
462	28.6	10.7	4.1	chr1	67475640	67475934	(181480488)	C	L2a	LINE/L2	(2)	3424	3108	128924
580	29.3	7.0	1.8	chr1	67719613	67719841	(181236581)	C	MIRb	SINE/MIR	(0)	268	27	129466
18	22.1	2.1	0.0	chr1	67833185	67833232	(181123190)	+	(CTTC)n	Simple_repeat	1	49	(0)	129656
16	24.3	3.3	1.6	chr1	67833273	67833332	(181123090)	+	(CGCCG)n	Simple_repeat	1	62	(0)	129657
11	13.4	5.7	2.7	chr1	67833344	67833378	(181123044)	+	(CCGCCG)n	Simple_repeat	1	37	(0)	129658
19	6.8	3.2	0.0	chr1	67833416	67833446	(181122976)	+	(CCT)n	Simple_repeat	1	32	(0)	129659
16	8.1	0.0	0.0	chr1	68231542	68231567	(180724855)	+	(CCCAC)n	Simple_repeat	1	26	(0)	130266
19	6.2	2.8	2.7	chr1	68497219	68497254	(180459168)	+	(GCTGG)n	Simple_repeat	1	37	(0)	130753
15	25.6	0.0	0.0	chr1	70221199	70221232	(178735190)	+	GA-rich	Low_complexity	1	34	(0)	133041
22	11.7	1.9	5.7	chr1	70221460	70221511	(178734911)	+	(GCG)n	Simple_repeat	1	53	(0)	133042
20	22.2	0.0	0.0	chr1	70221683	70221729	(178734693)	+	(GCG)n	Simple_repeat	1	47	(0)	133043
2076	14.4	0.7	0.3	chr1	70313247	70313544	(178642878)	+	AluJo	SINE/Alu	1	299	(13)	133192
2555	23.9	9.7	1.9	chr1	70684531	70685510	(178270912)	C	L1PB4	LINE/L1	(4501)	2418	1302	133823
467	33.9	6.4	1.8	chr1	70685513	70685794	(178270628)	C	L1PB4	LINE/L1	(5290)	1629	1334	133823
1353	29.7	4.9	7.8	chr1	70685924	70686829	(178269593)	C	L1PB4	LINE/L1	(5841)	1094	217	133823
10280	14.4	1.3	0.2	chr1	71714354	71715965	(177240457)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	3	135242
35	0.0	0.0	0.0	chr1	72282595	72282627	(176673795)	+	(T)n	Simple_repeat	1	33	(0)	136018
18	14.1	8.3	0.0	chr1	72282717	72282764	(176673658)	+	(CCTCC)n	Simple_repeat	1	52	(0)	136019
16	18.8	2.8	8.2	chr1	72282765	72282787	(176673635)	+	(CCT)n	Simple_repeat	1	73	(0)	136020
28	17.9	3.7	3.6	chr1	72282853	72282933	(176673489)	+	(GGC)n	Simple_repeat	1	84	(0)	136021
32	7.4	0.0	0.0	chr1	72282939	72282981	(176673441)	+	(CAG)n	Simple_repeat	1	43	(0)	136022
5292	21.0	1.1	0.7	chr1	73616966	73618223	(175338199)	C	L1MA1	LINE/L1	(5920)	1645	327	137596
15	30.4	1.4	2.7	chr1	75724615	75724686	(173231736)	+	(CCGCC)n	Simple_repeat	1	73	(0)	140345
1459	17.5	9.0	7.8	chr1	75764264	75764648	(173191774)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	140416
1623	17.8	9.9	9.5	chr1	75764649	75764865	(173191557)	C	MER21C	LTR/ERVL	(645)	293	18	140415
830	18.5	3.8	1.9	chr1	75765116	75765272	(173191150)	+	AluJr	SINE/Alu	137	296	(16)	140417
254	18.9	0.0	5.4	chr1	75784609	75784664	(173171758)	C	L2a	LINE/L2	(4)	3422	3370	140451
815	20.9	0.0	3.7	chr1	75784717	75784879	(173171543)	C	AluJb	SINE/Alu	(19)	293	137	140452
796	13.3	0.8	4.4	chr1	75784885	75784943	(173171479)	C	AluJo	SINE/Alu	(181)	131	78	140453
2138	18.2	12.3	10.9	chr1	75784944	75785027	(173171395)	+	LTR8	LTR/ERV1	1	75	(616)	140454
14	0.0	0.0	0.0	chr1	75797175	75797192	(173159230)	+	(AGC)n	Simple_repeat	1	18	(0)	140467
3622	10.8	3.3	12.4	chr1	76302771	76303470	(172652952)	C	MER51A	LTR/ERV1	(0)	634	1	141245
216	35.0	0.0	2.4	chr1	77011434	77011515	(171944907)	+	MER5A	DNA/hAT-Charlie	108	187	(2)	142231
1944	15.0	7.0	2.0	chr1	77472792	77473132	(171483290)	C	MLT1D	LTR/ERVL-MaLR	(146)	359	1	142936
1052	14.8	3.0	0.6	chr1	77473220	77473381	(171483041)	C	AluJr	SINE/Alu	(10)	302	137	142937
300	33.3	12.6	0.0	chr1	77473393	77473524	(171482898)	C	L3	LINE/CR1	(33)	4066	3916	142938
21590	9.0	1.3	2.4	chr1	78256977	78262640	(170693782)	+	L1PA10	LINE/L1	55	5653	(700)	144337
10129	14.5	1.7	0.3	chr1	79718536	79720141	(169236281)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	3	146239
1913	17.1	0.0	2.5	chr1	82510224	82510539	(166445883)	+	AluJb	SINE/Alu	1	308	(4)	149908
1084	28.5	13.8	1.9	chr1	82984869	82985349	(165971073)	+	LTR16E2	LTR/ERVL	27	568	(0)	150559
37	15.9	0.0	0.0	chr1	84078068	84078133	(164878289)	+	(CCG)n	Simple_repeat	1	66	(0)	152037
15555	16.3	4.3	3.7	chr1	84219511	84220728	(164735694)	C	L1MA4A	LINE/L1	(1055)	6507	5255	152214
461	22.4	7.1	6.5	chr1	84573948	84574100	(164382322)	+	MIRb	SINE/MIR	1	154	(114)	152737
946	14.6	0.0	0.0	chr1	84999871	85000000	(163956422)	+	AluJo	SINE/Alu	1	130	(182)	153441
1066	17.9	2.2	0.6	chr1	85000001	85000179	(163956243)	+	AluJb	SINE/Alu	131	312	(0)	153442
1162	15.1	0.5	9.2	chr1	85165866	85166059	(163790363)	C	AluJr	SINE/Alu	(0)	312	126	153728
2044	13.0	1.4	0.3	chr1	85166060	85166352	(163790070)	+	AluSx	SINE/Alu	1	296	(16)	153729
16001	6.7	1.3	1.8	chr1	85788391	85790539	(163165883)	C	L1PA10	LINE/L1	(815)	5331	3161	154741
19037	9.6	2.3	1.9	chr1	86554566	86558496	(162397926)	C	L1PA14	LINE/L1	(376)	7780	3817	155774
13	29.5	1.4	4.2	chr1	86914936	86915006	(162041416)	+	(CCCCGCT)n	Simple_repeat	1	72	(0)	156335
10004	10.9	4.5	3.1	chr1	87012594	87014151	(161942271)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	156479
11481	10.7	1.5	0.1	chr1	88617860	88619466	(160336956)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	158693
21	23.3	0.0	0.0	chr1	88683885	88683929	(160272493)	+	A-rich	Low_complexity	1	45	(0)	158815
12	20.4	5.6	3.5	chr1	88684485	88684538	(160271884)	+	(CTCTCCC)n	Simple_repeat	1	57	(0)	158816
4337	9.8	4.5	3.4	chr1	88974601	88975285	(159981137)	+	LTR12	LTR/ERV1	1	693	(133)	159307
1343	9.1	0.0	0.0	chr1	88975286	88975450	(159980972)	C	AluSc8	SINE/Alu	(146)	165	1	159308
2617	3.1	0.0	0.0	chr1	88991975	88992264	(159964158)	C	AluY	SINE/Alu	(8)	303	14	159335
15	3.7	7.1	0.0	chr1	88992551	88992578	(159963844)	+	(GCGCC)n	Simple_repeat	1	30	(0)	159336
11	20.8	0.0	2.9	chr1	89633168	89633202	(159323220)	+	(CGCGGC)n	Simple_repeat	1	35	(0)	160109
5250	19.6	4.0	3.1	chr1	90956832	90958065	(157998357)	+	L1MB5	LINE/L1	3175	4430	(1716)	161996
1188	11.0	16.6	0.0	chr1	90958070	90958260	(157998162)	+	AluSq2	SINE/Alu	83	311	(2)	162011
3553	19.9	8.8	1.6	chr1	90958261	90959816	(157996606)	+	L1MB5	LINE/L1	4421	6099	(75)	161996
2335	9.6	1.3	0.3	chr1	91517816	91518116	(157438306)	+	AluSx3	SINE/Alu	1	304	(7)	162833
602	31.3	13.2	6.2	chr1	91518117	91518209	(157438213)	C	L2c	LINE/L2	(1255)	2164	2091	162831
1259	15.0	9.9	1.9	chr1	91614602	91614856	(157341566)	C	AluJr	SINE/Alu	(0)	312	50	162987
2103	11.9	2.0	0.3	chr1	91891221	91891515	(157064907)	+	AluJb	SINE/Alu	1	300	(12)	163422
13	4.1	3.7	3.6	chr1	93179890	93179916	(155776506)	+	(GCCTC)n	Simple_repeat	1	28	(0)	165854
13	9.7	0.0	0.0	chr1	93180359	93180380	(155776042)	+	(GGC)n	Simple_repeat	1	22	(0)	165855
10736	9.5	5.0	0.3	chr1	93242516	93244021	(155712401)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	165978
12	27.8	3.9	0.0	chr1	93448023	93448074	(155508348)	+	(CCCCCTC)n	Simple_repeat	1	54	(0)	166315
535	32.6	9.3	0.0	chr1	93711981	93712176	(155244246)	+	MIRb	SINE/MIR	30	245	(23)	166722
19	9.8	0.0	2.9	chr1	94418422	94418456	(154537966)	+	(GCC)n	Simple_repeat	1	35	(0)	167758
326	15.1	8.8	2.7	chr1	94919347	94919421	(154037001)	+	UCON48	Unknown	145	224	(40)	168502
3030	13.3	7.9	4.3	chr1	96715301	96715883	(152240539)	C	MER4B	LTR/ERV1	(4)	606	1	171061
1376	28.5	8.9	7.2	chr1	96715884	96716699	(152239723)	C	HAL1	LINE/L1	(69)	2438	1599	171060
17	18.9	2.9	7.0	chr1	96721667	96721735	(152234687)	+	(CGC)n	Simple_repeat	1	71	(0)	171072
402	30.0	4.3	4.8	chr1	99790914	99791123	(149165299)	C	HAL1ME	LINE/L1	(40)	2425	2217	175378
3410	19.5	3.1	5.6	chr1	99907274	99908544	(149047878)	C	L1MB7	LINE/L1	(349)	6233	5016	175598
1444	28.1	8.5	5.8	chr1	99908557	99909855	(149046567)	C	L1MB7	LINE/L1	(5314)	1233	24	175598
13	5.3	0.0	0.0	chr1	99970237	99970256	(148986166)	+	(GGA)n	Simple_repeat	1	20	(0)	175723
1776	14.6	0.0	4.5	chr1	101233455	101233762	(147722660)	+	AluJo	SINE/Alu	14	307	(5)	177730
227	22.9	3.7	10.3	chr1	101233773	101233811	(147722611)	+	MER53	DNA/hAT	1	33	(160)	177731
713	24.6	17.7	5.0	chr1	101543242	101543904	(147412518)	C	LTR50	LTR/ERVL	(0)	795	51	178184
3859	18.6	0.6	5.1	chr1	102625814	102626070	(146330352)	C	L1MA7	LINE/L1	(0)	6291	6046	179549
1595	18.1	6.1	1.4	chr1	102626071	102626352	(146330070)	C	AluJb	SINE/Alu	(16)	296	1	179550
291	20.0	7.4	0.0	chr1	104671995	104672069	(144284353)	C	MLT1N2	LTR/ERVL-MaLR	(17)	545	465	181944
263	29.5	2.2	1.1	chr1	104672499	104672587	(144283835)	+	MIR	SINE/MIR	23	112	(150)	181945
9942	13.7	1.4	2.9	chr1	104903306	104904908	(144051514)	C	THE1B-int	LTR/ERVL-MaLR	(1)	1579	1	182198
17452	15.1	3.5	2.4	chr1	105065321	105070477	(143885945)	C	L1MA2	LINE/L1	(0)	7723	2500	182402
6891	12.8	1.5	0.4	chr1	106808865	106809874	(142146548)	C	THE1D-int	LTR/ERVL-MaLR	(11)	1569	549	184521
2105	14.1	2.7	2.5	chr1	106809875	106810237	(142146185)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	184522
3683	19.8	4.0	3.9	chr1	106975501	106976266	(141980156)	+	L1M3f	LINE/L1	4	770	(4558)	184760
28	19.9	0.0	0.0	chr1	107140757	107140809	(141815613)	+	A-rich	Low_complexity	1	53	(0)	185029
12	20.8	0.0	2.9	chr1	107140972	107141006	(141815416)	+	(CCTC)n	Simple_repeat	1	35	(0)	185030
11	9.6	8.6	2.6	chr1	107141261	107141295	(141815127)	+	(CTCCCG)n	Simple_repeat	1	38	(0)	185031
13	23.6	1.9	3.7	chr1	108200192	108200244	(140756178)	+	G-rich	Low_complexity	1	54	(0)	186508
17	13.8	0.0	2.9	chr1	108692549	108692583	(140263839)	+	(CCCT)n	Simple_repeat	1	35	(0)	187164
17	19.2	2.0	2.0	chr1	108692627	108692691	(140263731)	+	(GCAGCA)n	Simple_repeat	1	65	(0)	187165
445	23.2	1.9	1.5	chr1	108963593	108963725	(139992697)	C	Charlie15b	DNA/hAT-Charlie	(16)	1045	926	187650
236	31.4	4.4	0.0	chr1	109643096	109643181	(139313241)	+	MIR	SINE/MIR	118	207	(55)	188892
1780	17.5	2.7	0.3	chr1	111143735	111144026	(137812396)	C	AluJb	SINE/Alu	(9)	303	5	191165
2878	26.9	5.1	2.3	chr1	111286400	111287263	(137669159)	C	L2a	LINE/L2	(680)	2739	1851	191339
914	20.8	0.0	1.8	chr1	111287432	111287599	(137668823)	C	AluJb	SINE/Alu	(19)	293	129	191340
550	24.6	10.8	0.8	chr1	111287629	111287894	(137668528)	C	HAL1b	LINE/L1	(654)	1767	1472	191341
28	0.0	0.0	0.0	chr1	111593653	111593679	(137362743)	+	(T)n	Simple_repeat	1	27	(0)	191764
919	30.3	2.1	9.3	chr1	112018471	112018848	(136937574)	+	L2a	LINE/L2	2654	3005	(414)	192465
2308	7.0	2.0	4.5	chr1	112390470	112390781	(136565641)	+	AluSx1	SINE/Alu	1	304	(8)	193019
1898	12.9	0.3	5.6	chr1	112864504	112864806	(136091616)	+	AluSz	SINE/Alu	9	295	(17)	193933
2317	10.8	0.3	0.0	chr1	112864934	112865238	(136091184)	C	AluSx	SINE/Alu	(6)	306	1	193934
12	27.6	6.9	2.1	chr1	113237098	113237184	(135719238)	+	(CTCTCC)n	Simple_repeat	1	93	(0)	194725
4409	18.8	7.9	4.9	chr1	113845501	113847581	(135108841)	C	L1MDa	LINE/L1	(3370)	3167	1001	195636
772	28.9	12.6	3.9	chr1	114042545	114043030	(134913392)	+	LTR16E1	LTR/ERVL	2	535	(3)	195985
502	29.6	1.8	0.6	chr1	114043182	114043344	(134913078)	C	MIRc	SINE/MIR	(31)	237	73	195986
4420	20.9	7.0	8.4	chr1	114503503	114504152	(134452270)	C	Charlie1a	DNA/hAT-Charlie	(579)	876	193	196707
1603	18.7	0.0	1.1	chr1	114504153	114504430	(134451992)	C	AluJb	SINE/Alu	(0)	312	38	196710
4420	20.9	7.0	8.4	chr1	114504431	114504656	(134451766)	C	Charlie1a	DNA/hAT-Charlie	(1263)	192	2	196707
16	25.7	1.8	1.7	chr1	114670043	114670115	(134286307)	+	(CCCCAG)n	Simple_repeat	1	73	(0)	197085
8260	23.4	3.4	3.6	chr1	115040661	115043151	(133913271)	+	L1MA4	LINE/L1	16	3199	(4366)	197613
991	20.9	14.1	3.8	chr1	115393590	115394034	(133562388)	+	L1MC5	LINE/L1	7152	7643	(1661)	198113
1371	9.0	0.0	0.0	chr1	115394060	115394225	(133562197)	+	AluYc	SINE/Alu	127	292	(7)	198115
510	23.8	10.1	0.0	chr1	115394231	115394436	(133561986)	+	L1MC5	LINE/L1	7672	7900	(1404)	198113
14	23.5	4.3	4.1	chr1	115641866	115641935	(133314487)	+	(GGCTG)n	Simple_repeat	1	73	(0)	198480
15	26.0	3.3	1.6	chr1	115641931	115641991	(133314431)	+	(GGCAGC)n	Simple_repeat	1	63	(0)	198481
13	4.8	4.5	0.0	chr1	115641973	115641994	(133314428)	+	(GCG)n	Simple_repeat	1	23	(0)	198482
13	22.3	4.3	5.5	chr1	115642016	115642085	(133314337)	+	(CGCGGAC)n	Simple_repeat	1	73	(0)	198483
1536	22.4	4.9	9.2	chr1	116749649	116750200	(132206222)	+	MER34C_	LTR/ERV1	57	585	(0)	200201
583	29.2	7.5	0.7	chr1	116750220	116750529	(132205893)	C	L1M5	LINE/L1	(319)	5805	5473	200203
1355	26.2	9.1	0.0	chr1	116852234	116852614	(132103808)	C	LTR16A	LTR/ERVL	(0)	451	33	200381
2134	10.6	2.1	0.0	chr1	116973348	116973630	(131982792)	+	AluSz	SINE/Alu	20	308	(4)	200570
184	21.9	20.6	0.0	chr1	116973714	116973786	(131982636)	+	L2c	LINE/L2	3258	3349	(38)	200571
45	2.3	0.0	0.0	chr1	117367314	117367358	(131589064)	+	(GAG)n	Simple_repeat	1	45	(0)	201206
14	4.7	0.0	4.2	chr1	117367469	117367492	(131588930)	+	(GCG)n	Simple_repeat	1	24	(0)	201207
823	30.0	11.7	4.0	chr1	117542649	117543317	(131413105)	C	L2a	LINE/L2	(0)	3426	2701	201454
409	31.1	3.9	10.8	chr1	118131930	118132427	(130823995)	C	L2c	LINE/L2	(3)	3384	2923	202346
16069	9.3	3.8	0.2	chr1	119428761	119431316	(129525106)	C	PRIMA4-int	LTR/ERV1	(5567)	2703	1	204099
15	16.4	2.9	0.0	chr1	119648153	119648186	(129308236)	+	(GCG)n	Simple_repeat	1	35	(0)	204334
57	3.4	0.0	0.0	chr1	119648189	119648248	(129308174)	+	(GCTG)n	Simple_repeat	1	60	(0)	204335
11077	11.6	3.4	0.1	chr1	119700939	119702512	(129253910)	+	MSTA-int	LTR/ERVL-MaLR	3	1631	(0)	204418
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
306	28.1	10.1	1.2	chr1	144551093	144551254	(104405168)	C	LTR75B	LTR/ERVL	(425)	183	6	209605
302	21.5	7.1	0.0	chr1	144551260	144551324	(104405098)	+	MER45B	DNA/hAT-Tip100	311	380	(660)	209606
1290	7.3	0.0	0.6	chr1	144551779	144551943	(104404479)	C	U1	snRNA	(1)	164	1	209607
1762	15.2	0.3	4.2	chr1	145886472	145886781	(103069641)	C	AluJr	SINE/Alu	(6)	306	9	211702
1597	0.0	0.0	0.0	chr1	146376807	146376970	(102579452)	+	U1	snRNA	1	164	(1)	212533
294	17.2	7.2	3.0	chr1	146377412	146377477	(102578945)	C	MER45B	DNA/hAT-Tip100	(660)	380	312	212534
660	26.0	6.6	4.2	chr1	147083742	147083978	(101872444)	C	L1ME2	LINE/L1	(121)	6043	5801	213625
290	22.1	9.6	0.9	chr1	147083989	147084093	(101872329)	C	LTR75B	LTR/ERVL	(489)	119	5	213626
224	27.1	8.6	0.0	chr1	147724309	147724393	(101232029)	+	MIR3	SINE/MIR	68	160	(48)	214529
371	23.2	6.7	3.1	chr1	147724394	147724522	(101231900)	C	Charlie19a	DNA/hAT-Charlie	(0)	386	253	214530
2137	19.0	3.9	2.9	chr1	147724535	147725021	(101231401)	C	L1MA9	LINE/L1	(38)	6274	5783	214531
307	25.8	10.0	2.9	chr1	148387825	148387992	(100568430)	C	LTR75	LTR/ERVL	(425)	183	1	215619
323	20.0	7.1	0.0	chr1	148387993	148388056	(100568366)	+	MER45B	DNA/hAT-Tip100	312	380	(660)	215620
1359	4.3	1.2	0.0	chr1	148388490	148388651	(100567771)	C	U1	snRNA	(1)	164	1	215621
1017	20.6	0.0	0.0	chr1	149636766	149636930	(99319492)	+	U1	snRNA	1	165	(0)	217501
816	19.8	15.0	12.7	chr1	149958158	149958322	(98998100)	C	L1MC5	LINE/L1	(102)	9202	9068	218033
2166	10.3	4.3	0.0	chr1	149958323	149958613	(98997809)	C	AluSx3	SINE/Alu	(7)	304	1	218034
2553	6.5	0.0	0.0	chr1	151069898	151070207	(97886215)	+	AluY	SINE/Alu	1	310	(1)	220419
71	39.2	0.2	2.2	chr1	151372858	151372901	(97583521)	+	(GT)n	Simple_repeat	1	44	(0)	221070
2223	10.6	1.3	0.0	chr1	151372902	151373203	(97583219)	C	AluSx1	SINE/Alu	(6)	306	1	221071
2378	8.3	1.0	0.0	chr1	154998728	154999029	(93957393)	C	AluSp	SINE/Alu	(7)	306	2	227184
2047	15.5	0.3	2.5	chr1	155524968	155525284	(93431138)	+	AluJo	SINE/Alu	3	312	(0)	228195
431	23.1	14.8	6.5	chr1	155525322	155525506	(93430916)	+	MER46C	DNA/TcMar-Tigger	21	223	(115)	228196
2296	8.2	1.0	0.0	chr1	155857448	155857739	(93098683)	+	AluSx	SINE/Alu	1	295	(17)	228965
330	28.3	13.2	6.2	chr1	155857887	155858097	(93098325)	C	MIRc	SINE/MIR	(4)	264	37	228966
19	9.2	2.9	0.0	chr1	156082822	156082856	(92873566)	+	(GGGGGCC)n	Simple_repeat	1	36	(0)	229435
20	19.1	1.7	3.4	chr1	156082887	156082944	(92873478)	+	(CGCTCCC)n	Simple_repeat	1	59	(0)	229436
1150	20.0	1.6	1.8	chr1	156518870	156519160	(92437262)	C	L1MD3	LINE/L1	(0)	7995	7616	230276
2276	11.3	0.3	0.0	chr1	156519460	156519768	(92436654)	C	AluSz	SINE/Alu	(0)	312	3	230277
12	18.8	2.6	2.6	chr1	156920241	156920278	(92036144)	+	(CCCCAGC)n	Simple_repeat	1	39	(0)	230987
1018	20.1	0.0	1.6	chr1	156961803	156961994	(91994428)	+	MER20	DNA/hAT-Charlie	1	189	(30)	231037
13	16.3	0.0	5.3	chr1	157045603	157045640	(91910782)	+	G-rich	Low_complexity	1	38	(0)	231176
19	26.6	0.0	0.0	chr1	157045824	157045877	(91910545)	+	(CCTC)n	Simple_repeat	1	54	(0)	231177
23	16.0	3.5	1.7	chr1	157046168	157046260	(91910162)	+	(CCGCCA)n	Simple_repeat	1	94	(0)	231178
14	21.3	2.2	2.2	chr1	157046335	157046379	(91910043)	+	(CCCGTG)n	Simple_repeat	1	46	(0)	231179
17	17.3	9.6	3.3	chr1	161045483	161045565	(87910857)	+	(AGCCCCGC)n	Simple_repeat	1	91	(0)	236760
346	27.4	11.1	3.0	chr1	161097880	161098011	(87858411)	C	MIR3	SINE/MIR	(63)	145	2	236863
2433	8.4	0.7	0.0	chr1	161152770	161153077	(87803345)	+	AluSp	SINE/Alu	1	310	(3)	236987
898	13.3	0.8	1.5	chr1	161153132	161153266	(87803156)	+	AluJb	SINE/Alu	160	293	(19)	236988
12	25.5	0.0	0.0	chr1	161726750	161726786	(87229636)	+	(CGCGG)n	Simple_repeat	1	37	(0)	237995
19	33.5	4.7	0.7	chr1	161727070	161727198	(87229224)	+	(CCCCCGC)n	Simple_repeat	1	135	(0)	237996
5400	16.9	1.1	0.6	chr1	162423363	162424229	(86532193)	+	L1MA8	LINE/L1	4518	5392	(899)	239098
1964	18.2	1.3	6.8	chr1	162855778	162856190	(86100232)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	239859
1576	20.5	0.7	1.7	chr1	163982342	163982634	(84973788)	+	AluJb	SINE/Alu	2	291	(21)	241507
1028	19.5	8.3	5.1	chr1	163982635	163982869	(84973553)	C	MER33	DNA/hAT-Charlie	(72)	252	1	241506
5727	18.4	2.8	2.8	chr1	164272002	164272860	(84683562)	C	ERVL-B4-int	LTR/ERVL	(4623)	1091	255	241855
3499	22.3	2.2	0.7	chr1	164272861	164273581	(84682841)	+	MER44C	DNA/TcMar-Tigger	1	732	(1)	241856
600	21.9	9.4	4.1	chr1	164781047	164781217	(84175205)	C	MamSINE1	SINE/tRNA-RTE	(33)	257	77	242624
254	35.9	11.9	2.5	chr1	165492494	165492996	(83463426)	C	L2b	LINE/L2	(38)	3349	2791	243732
463	29.0	5.8	1.5	chr1	165533220	165533352	(83423070)	C	MIR3	SINE/MIR	(68)	140	2	243810
256	20.0	0.0	0.0	chr1	167820413	167820457	(81135965)	+	MER5A	DNA/hAT-Charlie	145	189	(0)	247367
1672	17.8	2.1	1.4	chr1	167820658	167820944	(81135478)	+	AluJb	SINE/Alu	2	290	(22)	247368
1157	25.2	7.2	5.1	chr1	168053439	168053947	(80902475)	C	MER68B	LTR/ERVL	(0)	563	20	247725
2024	12.2	0.7	5.8	chr1	169440635	169440945	(79515477)	+	AluSz6	SINE/Alu	1	295	(17)	249934
4144	9.1	2.0	3.8	chr1	169546601	169546847	(79409575)	+	L1PA12	LINE/L1	4761	5016	(1130)	250092
1999	10.7	0.3	10.7	chr1	169546848	169547194	(79409228)	+	AluSx	SINE/Alu	1	311	(1)	250093
1659	19.6	1.7	0.7	chr1	170425319	170425609	(78530813)	+	AluSz6	SINE/Alu	3	296	(16)	251295
5000	7.8	3.0	4.9	chr1	170425610	170426164	(78530258)	+	L1PREC2	LINE/L1	4792	5330	(816)	251294
15	18.1	0.0	3.0	chr1	170531952	170531984	(78424438)	+	GA-rich	Low_complexity	1	33	(0)	251433
4825	11.7	1.4	0.2	chr1	170786871	170787981	(78168441)	+	L1PA15	LINE/L1	4907	6029	(136)	251776
1888	15.5	1.8	1.8	chr1	170787984	170788319	(78168103)	+	L1PA15	LINE/L1	5825	6160	(5)	251777
5828	24.1	5.3	5.2	chr1	171221157	171224222	(77732200)	+	HERVIP10B3-int	LTR/ERV1	2041	7603	(0)	252373
1166	13.9	21.6	3.4	chr1	173863025	173863261	(75093161)	+	AluSg7	SINE/Alu	1	292	(17)	256235
14	16.1	0.0	0.0	chr1	174022262	174022289	(74934133)	+	(CTG)n	Simple_repeat	1	28	(0)	256537
24	24.9	0.0	1.5	chr1	174022311	174022378	(74934044)	+	(CCT)n	Simple_repeat	1	68	(0)	256538
12	27.6	0.0	0.0	chr1	174022435	174022473	(74933949)	+	GA-rich	Low_complexity	1	39	(0)	256539
388	30.5	4.5	3.0	chr1	174271544	174271675	(74684747)	+	MIR	SINE/MIR	28	161	(101)	256996
14	33.3	1.4	1.4	chr1	176207201	176207269	(72749153)	+	(CCG)n	Simple_repeat	1	70	(0)	259874
15	20.5	5.1	0.0	chr1	176207252	176207310	(72749112)	+	(GC)n	Simple_repeat	1	62	(0)	259875
259	31.6	10.2	4.4	chr1	176466561	176466770	(72489652)	C	L2c	LINE/L2	(189)	3198	2987	260214
2005	15.2	3.7	0.0	chr1	176466978	176467312	(72489110)	C	Tigger3a	DNA/TcMar-Tigger	(0)	348	1	260219
719	32.3	6.6	4.4	chr1	178072119	178072665	(70883757)	+	MamGypsy2-I	LTR/Gypsy	2266	2825	(1341)	262530
41	14.1	0.0	1.4	chr1	178093761	178093834	(70862588)	+	(GCCGCC)n	Simple_repeat	1	74	(0)	262569
14	21.1	0.0	6.1	chr1	178094013	178094061	(70862361)	+	(GGC)n	Simple_repeat	1	49	(0)	262570
14	15.8	0.0	5.1	chr1	178094065	178094103	(70862319)	+	(CCCAG)n	Simple_repeat	1	39	(0)	262571
14	19.3	6.4	0.0	chr1	178094104	178094109	(70862313)	+	(CCCCAG)n	Simple_repeat	3	50	(0)	262572
5329	10.3	1.3	0.2	chr1	178304703	178305508	(70650914)	+	L1M1	LINE/L1	4041	4855	(1291)	262890
1307	27.8	10.6	2.2	chr1	178305509	178305998	(70650424)	C	L2	LINE/L2	(801)	2618	2083	262891
20	0.0	0.0	0.0	chr1	179586177	179586198	(69370224)	+	(A)n	Simple_repeat	1	22	(0)	265038
26	16.7	3.3	0.0	chr1	179586273	179586332	(69370090)	+	(TCGGCGC)n	Simple_repeat	1	62	(0)	265039
360	33.3	10.3	5.3	chr1	179953876	179954160	(69002262)	C	L2b	LINE/L2	(2)	3373	3073	265604
1176	12.3	1.6	3.7	chr1	180456731	180456917	(68499505)	C	AluJb	SINE/Alu	(17)	295	113	266396
1975	13.0	5.0	0.3	chr1	180720953	180721237	(68235185)	+	AluSq2	SINE/Alu	1	299	(14)	266850
11	10.2	2.7	7.9	chr1	181482618	181482654	(67473768)	+	(GCCTCT)n	Simple_repeat	1	38	(0)	268056
17	29.0	0.0	1.7	chr1	181482800	181482859	(67473563)	+	(CGCC)n	Simple_repeat	1	60	(0)	268057
11	19.1	2.1	6.2	chr1	182615102	182615148	(66341274)	+	(CGGCCG)n	Simple_repeat	1	48	(0)	269753
1917	16.3	6.0	2.0	chr1	183441515	183441782	(65514640)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	78	271131
3102	13.3	6.7	5.5	chr1	183441783	183442314	(65514108)	C	LTR45C	LTR/ERV1	(0)	539	1	271132
1698	17.5	2.7	0.7	chr1	183599100	183599391	(65357031)	+	AluJr	SINE/Alu	1	298	(14)	271398
1227	30.9	15.4	5.0	chr1	183599392	183599402	(65357020)	+	L3	LINE/CR1	2885	2892	(1207)	271397
132	4.5	1.8	1.2	chr1	183599403	183599568	(65356854)	+	(TTTC)n	Simple_repeat	1	169	(0)	271399
2213	9.2	0.0	0.3	chr1	183599569	183599852	(65356570)	C	AluSx	SINE/Alu	(29)	283	1	271400
17	9.7	2.9	2.8	chr1	183805083	183805117	(65151305)	+	(GCTC)n	Simple_repeat	1	36	(0)	271671
13	8.5	4.0	0.0	chr1	183805140	183805164	(65151258)	+	(CGG)n	Simple_repeat	1	26	(0)	271672
6543	14.0	4.2	2.4	chr1	184674926	184675601	(64280821)	+	L1MA5A	LINE/L1	4605	5297	(1000)	273033
302	29.3	5.7	8.7	chr1	185237956	185237991	(63718431)	+	MIRc	SINE/MIR	66	100	(168)	273953
1940	17.1	0.3	0.0	chr1	185237992	185238284	(63718138)	C	AluJb	SINE/Alu	(17)	295	2	273954
302	29.3	5.7	8.7	chr1	185238285	185238374	(63718048)	+	MIRc	SINE/MIR	101	188	(80)	273953
13	18.3	0.0	3.0	chr1	185734404	185734436	(63221986)	+	(GGC)n	Simple_repeat	1	33	(0)	274707
352	33.7	6.5	4.7	chr1	186679921	186680132	(62276290)	C	MIRb	SINE/MIR	(51)	217	2	275943
13	14.3	4.8	4.5	chr1	186680276	186680317	(62276105)	+	(GGCGC)n	Simple_repeat	1	44	(0)	275944
9579	8.1	8.2	1.4	chr1	187072601	187074381	(61882041)	C	LTR12C	LTR/ERV1	(0)	1579	3	276520
2194	21.6	5.2	1.8	chr1	188681451	188681952	(60274470)	C	L1M2	LINE/L1	(850)	5293	4785	278608
289	7.9	0.0	0.0	chr1	188681952	188681989	(60274433)	+	L1MA7	LINE/L1	5500	5537	(775)	278611
1243	18.8	0.0	2.4	chr1	188681966	188682211	(60274211)	+	L1MA7	LINE/L1	5817	6056	(235)	278611
795	24.6	0.0	0.6	chr1	190646067	190646233	(58310189)	+	FRAM	SINE/Alu	1	166	(10)	281181
13	13.7	0.0	0.0	chr1	193060087	193060111	(55896311)	+	(CTC)n	Simple_repeat	1	25	(0)	284288
16	25.5	0.0	3.6	chr1	193122096	193122150	(55834272)	+	GA-rich	Low_complexity	1	55	(0)	284394
16	18.3	2.1	4.2	chr1	193122142	193122188	(55834234)	+	(GGC)n	Simple_repeat	1	48	(0)	284395
1797	15.2	0.9	10.1	chr1	195252060	195252424	(53703998)	+	MER1B	DNA/hAT-Charlie	1	331	(8)	287202
1903	30.9	6.2	4.6	chr1	195252446	195253440	(53702982)	+	ERVL-B4-int	LTR/ERVL	4641	5652	(2)	287200
18	14.5	0.0	2.5	chr1	196608422	196608461	(52347961)	+	G-rich	Low_complexity	1	40	(0)	288876
1846	17.4	0.0	4.6	chr1	197847153	197847479	(51108943)	+	AluJb	SINE/Alu	1	312	(0)	290433
35	0.0	0.0	0.0	chr1	197847496	197847525	(51108897)	+	(GA)n	Simple_repeat	1	30	(0)	290434
316	13.1	0.0	8.2	chr1	197847546	197847606	(51108816)	+	AluJr	SINE/Alu	74	129	(183)	290435
393	17.3	0.0	5.1	chr1	197847640	197847718	(51108704)	C	MER63D	DNA/hAT-Blackjack	(529)	532	458	290436
15	7.6	3.6	0.0	chr1	197902930	197902957	(51053465)	+	(CCCGC)n	Simple_repeat	1	29	(0)	290519
23	24.3	4.1	4.0	chr1	197915793	197915889	(51040533)	+	(TTCC)n	Simple_repeat	1	101	(0)	290527
14	3.5	6.1	5.7	chr1	200669442	200669474	(48286948)	+	(GGC)n	Simple_repeat	1	35	(0)	294759
19	7.3	0.0	0.0	chr1	200669893	200669921	(48286501)	+	(GGAGC)n	Simple_repeat	1	29	(0)	294760
14	10.0	2.8	5.4	chr1	200670033	200670068	(48286354)	+	G-rich	Low_complexity	1	37	(0)	294761
23	16.8	0.0	8.3	chr1	204494845	204494916	(44461506)	+	(CCTCC)n	Simple_repeat	1	72	(0)	301631
658	27.3	4.0	1.0	chr1	204623871	204624071	(44332351)	C	MIRc	SINE/MIR	(55)	213	5	301915
1236	13.4	12.2	0.0	chr1	205487973	205488174	(43468248)	C	MER30	DNA/hAT-Charlie	(0)	230	1	303538
406	30.3	3.5	6.6	chr1	207109392	207109620	(41846802)	C	MIRb	SINE/MIR	(38)	230	1	306218
13	22.0	4.1	2.0	chr1	208243835	208243883	(40712539)	+	(CGCTCCG)n	Simple_repeat	1	51	(0)	307821
4160	15.7	3.6	3.8	chr1	211413851	211414723	(37541699)	+	L1MA4	LINE/L1	4038	4913	(1233)	312654
1815	16.7	1.4	1.0	chr1	211414724	211415016	(37541406)	+	AluJr	SINE/Alu	1	294	(18)	312655
4160	15.3	3.6	3.6	chr1	211415017	211415109	(37541313)	+	L1MA4	LINE/L1	4911	4989	(1154)	312654
687	24.9	7.1	4.9	chr1	213014842	213015145	(35941277)	+	MER113A	DNA/hAT-Charlie	3	313	(1)	315576
12	25.3	1.6	6.2	chr1	213015515	213015577	(35940845)	+	(GCCC)n	Simple_repeat	1	64	(0)	315577
1554	29.2	5.2	2.8	chr1	214116995	214117732	(34838690)	C	L2a	LINE/L2	(0)	3426	2685	317210
13	0.0	0.0	4.8	chr1	215567283	215567303	(33389119)	+	(TCC)n	Simple_repeat	1	21	(0)	319244
12	15.8	0.0	3.3	chr1	215567376	215567405	(33389017)	+	(GGC)n	Simple_repeat	1	30	(0)	319245
18	20.5	1.9	3.6	chr1	215567559	215567612	(33388810)	+	(CCG)n	Simple_repeat	1	55	(0)	319246
376	23.0	3.2	1.5	chr1	218259290	218259486	(30696936)	+	L1M3e	LINE/L1	2087	2272	(4765)	322950
334	37.2	8.9	0.5	chr1	218259634	218259838	(30696584)	C	L2c	LINE/L2	(211)	3176	2953	322953
622	18.7	13.3	4.7	chr1	218259842	218260032	(30696390)	C	MER20	DNA/hAT-Charlie	(2)	217	8	322954
353	29.9	10.3	7.7	chr1	219174483	219174804	(29781618)	+	L2b	LINE/L2	3061	3385	(2)	324251
752	29.2	10.8	6.9	chr1	219486055	219486493	(29469929)	C	L1MEf	LINE/L1	(5429)	971	523	324682
1279	9.0	13.1	0.5	chr1	219486494	219486694	(29469728)	+	MER30	DNA/hAT-Charlie	1	230	(0)	324684
752	29.2	10.8	6.9	chr1	219486695	219487081	(29469341)	C	L1MEf	LINE/L1	(5878)	522	109	324682
14	26.7	0.0	2.0	chr1	220271814	220271864	(28684558)	+	G-rich	Low_complexity	1	51	(0)	325956
31	9.2	0.0	0.0	chr1	220528033	220528079	(28428343)	+	(GGA)n	Simple_repeat	1	47	(0)	326370
13	13.2	6.7	4.2	chr1	220528171	220528215	(28428207)	+	(CGCGC)n	Simple_repeat	1	48	(0)	326371
15	23.4	2.8	5.4	chr1	220528499	220528570	(28427852)	+	(CCGCCTC)n	Simple_repeat	1	74	(0)	326372
13	18.4	0.0	0.0	chr1	220528630	220528660	(28427762)	+	(CTCCTC)n	Simple_repeat	1	31	(0)	326373
23	19.5	7.3	5.3	chr1	220748562	220748684	(28207738)	+	(CGCCTGG)n	Simple_repeat	1	132	(0)	326676
17756	12.3	1.9	1.6	chr1	222139229	222144047	(26812375)	+	L1MA3	LINE/L1	2892	7724	(0)	328711
553	24.0	9.0	6.4	chr1	223044576	223044776	(25911646)	+	L1MEd	LINE/L1	868	1080	(6006)	330090
871	12.4	0.6	14.4	chr1	223044782	223044969	(25911453)	+	AluJb	SINE/Alu	6	167	(145)	330093
1299	12.8	0.0	0.0	chr1	223044978	223045157	(25911265)	+	THE1B	LTR/ERVL-MaLR	58	237	(127)	330094
800	11.0	0.0	0.0	chr1	223045160	223045277	(25911145)	+	AluJb	SINE/Alu	191	308	(4)	330093
869	22.0	3.3	2.5	chr1	223045279	223045520	(25910902)	+	L1MEd	LINE/L1	1074	1317	(5769)	330090
284	33.0	17.4	0.6	chr1	223683851	223684027	(25272395)	C	MIRc	SINE/MIR	(50)	218	6	331017
379	29.6	7.9	6.8	chr1	223737941	223738157	(25218265)	C	L1M5	LINE/L1	(1312)	4834	4613	331138
1609	16.9	0.3	4.5	chr1	223738158	223738470	(25217952)	C	AluJo	SINE/Alu	(12)	300	1	331139
19	3.7	0.0	3.3	chr1	223845786	223845815	(25110607)	+	(GGC)n	Simple_repeat	1	30	(0)	331313
13	7.5	7.1	0.0	chr1	224183155	224183182	(24773240)	+	(GGCG)n	Simple_repeat	1	30	(0)	331974
14	5.0	0.0	0.0	chr1	224183257	224183277	(24773145)	+	(GCC)n	Simple_repeat	1	21	(0)	331975
35	2.5	2.4	0.0	chr1	224204729	224204769	(24751653)	+	(CAATATATTC)n	Simple_repeat	1	42	(0)	332037
16	24.0	0.0	0.0	chr1	224433594	224433628	(24522794)	+	(C)n	Simple_repeat	1	35	(0)	332545
20	29.8	0.0	0.0	chr1	224433800	224433864	(24522558)	+	(GGC)n	Simple_repeat	1	65	(0)	332546
312	31.0	8.8	1.9	chr1	224818444	224818601	(24137821)	C	LTR88a	LTR/Gypsy?	(1)	815	646	333211
249	26.6	6.8	5.5	chr1	224818887	224819075	(24137347)	C	LTR88a	LTR/Gypsy?	(626)	190	10	333211
13	19.2	1.6	9.2	chr1	224929879	224929942	(24026480)	+	(GGCG)n	Simple_repeat	1	65	(0)	333381
6843	11.5	5.7	2.9	chr1	225241481	225241941	(23714481)	C	Tigger3b	DNA/TcMar-Tigger	(0)	1231	757	333696
1824	15.2	0.3	3.6	chr1	225241942	225242243	(23714179)	+	AluJr	SINE/Alu	1	292	(20)	333697
6843	11.5	5.7	2.9	chr1	225242244	225242976	(23713446)	C	Tigger3b	DNA/TcMar-Tigger	(475)	756	2	333696
2198	15.6	4.0	5.4	chr1	225599822	225600197	(23356225)	+	MSTB	LTR/ERVL-MaLR	51	425	(1)	334206
1137	23.8	12.2	5.9	chr1	225600198	225600221	(23356201)	+	L1MC4	LINE/L1	7869	7892	(150)	334205
817	16.4	1.4	0.7	chr1	225600253	225600392	(23356030)	+	AluJb	SINE/Alu	169	309	(3)	334208
316	23.4	7.8	4.1	chr1	225600395	225600446	(23355976)	+	L1M5	LINE/L1	2974	3025	(3121)	334209
2992	17.9	8.9	4.8	chr1	225614359	225614834	(23341588)	C	MER21C	LTR/ERVL	(365)	573	1	334231
19	0.0	0.0	8.6	chr1	225614974	225615008	(23341414)	+	(TCTCCC)n	Simple_repeat	1	35	(0)	334233
10556	3.7	4.4	0.7	chr1	225615014	225616343	(23340079)	+	SVA_B	Retroposon/SVA	2	1383	(0)	334234
800	22.9	3.4	3.8	chr1	225809840	225809942	(23146480)	C	MER5C	DNA/hAT-Charlie	(128)	185	79	334623
2027	15.6	0.3	0.3	chr1	226027262	226027569	(22928853)	C	AluJb	SINE/Alu	(3)	309	2	335050
20	17.0	1.7	5.1	chr1	226062730	226062787	(22893635)	+	(CGC)n	Simple_repeat	1	59	(0)	335131
288	23.5	13.4	4.5	chr1	226601389	226601505	(22354917)	C	L1MC5	LINE/L1	(226)	9078	8951	336176
16	0.0	0.0	0.0	chr1	227317512	227317528	(21638894)	+	(A)n	Simple_repeat	1	17	(0)	337280
19	21.8	5.6	1.3	chr1	227318062	227318132	(21638290)	+	(GCCGC)n	Simple_repeat	1	75	(0)	337281
13	21.7	0.0	0.0	chr1	227318187	227318218	(21638204)	+	(GCG)n	Simple_repeat	1	32	(0)	337282
13	29.9	2.0	0.0	chr1	227318360	227318409	(21638013)	+	(CCTCT)n	Simple_repeat	1	51	(0)	337283
22	24.8	1.3	2.6	chr1	227318505	227318579	(21637843)	+	(CCCCCG)n	Simple_repeat	1	76	(0)	337284
12933	31.5	3.6	2.4	chr1	227500566	227503796	(21452626)	+	PRIMA41-int	LTR/ERV1	1269	4518	(3238)	337593
2513	23.0	6.8	3.0	chr1	227521871	227522601	(21433821)	C	L1PA12	LINE/L1	(6214)	767	7	337613
2273	15.4	11.6	14.2	chr1	227557774	227558349	(21398073)	+	LTR61	LTR/ERV1	1	559	(0)	337637
2224	18.6	3.2	2.1	chr1	227564047	227564512	(21391910)	C	MER57E3	LTR/ERV1	(16)	471	1	337651
2291	25.6	5.9	9.5	chr1	227581211	227582331	(21374091)	C	L1ME3A	LINE/L1	(13)	6551	5493	337673
1473	21.2	0.7	5.4	chr1	227582332	227582628	(21373794)	C	AluJr	SINE/Alu	(29)	283	1	337674
952	24.8	7.8	11.8	chr1	227582629	227582893	(21373529)	C	L1ME3A	LINE/L1	(1045)	5492	5229	337673
999	13.4	0.0	0.0	chr1	227583336	227583496	(21372926)	C	AluSz6	SINE/Alu	(0)	312	156	337676
1959	30.0	1.2	5.7	chr1	227583519	227584147	(21372275)	C	MER77	LTR/ERVL	(2)	602	3	337677
607	17.8	0.0	1.0	chr1	227706870	227706971	(21249451)	+	Tigger2a	DNA/TcMar-Tigger	1	101	(333)	337800
319	14.5	11.5	0.0	chr1	227706972	227707040	(21249382)	+	Tigger2	DNA/TcMar-Tigger	2460	2537	(181)	337801
22	22.4	4.3	5.2	chr1	227788900	227788991	(21167431)	+	(GT)n	Simple_repeat	1	96	(0)	337890
13	19.8	0.0	6.5	chr1	227946614	227946659	(21009763)	+	GA-rich	Low_complexity	1	46	(0)	338085
188	36.4	7.6	1.8	chr1	228005795	228005906	(20950516)	+	MIRc	SINE/MIR	110	228	(40)	338170
40	0.0	0.0	0.0	chr1	228406869	228406905	(20549517)	+	(T)n	Simple_repeat	1	37	(0)	338659
19	31.2	4.0	1.0	chr1	228407064	228407163	(20549259)	+	G-rich	Low_complexity	1	104	(0)	338660
826	7.2	8.3	0.0	chr1	228555793	228555903	(20400519)	+	5S	rRNA	1	121	(0)	338873
2308	8.2	0.0	2.5	chr1	228555908	228556226	(20400196)	C	AluY	SINE/Alu	(0)	311	1	338874
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
563	22.5	0.0	1.6	chr1	228647911	228648032	(20308390)	C	5S	rRNA	(1)	120	1	338982
355	22.2	2.2	0.0	chr1	228648618	228648707	(20307715)	+	MER101-int	LTR/ERV1	2919	3010	(3629)	338983
530	24.3	15.2	0.8	chr1	229011845	229012097	(19944325)	C	Kanga1a	DNA/TcMar-Tc2	(30)	724	429	339556
2260	22.0	9.1	4.6	chr1	229292791	229293544	(19662878)	C	MER21C	LTR/ERVL	(43)	895	19	340013
190	21.5	7.1	0.0	chr1	229293594	229293658	(19662764)	C	L2a	LINE/L2	(42)	3384	3315	340014
332	15.2	10.8	0.0	chr1	229341682	229341747	(19614675)	C	Charlie4z	DNA/hAT-Charlie	(2)	165	92	340084
28	0.0	12.5	0.0	chr1	229342108	229342155	(19614267)	+	(CCGCGTCCT)n	Simple_repeat	1	54	(0)	340085
13	12.2	2.4	7.1	chr1	229342214	229342254	(19614168)	+	G-rich	Low_complexity	1	42	(0)	340086
13	17.8	0.0	2.9	chr1	229342542	229342575	(19613847)	+	(CCGCC)n	Simple_repeat	1	34	(0)	340087
382	32.2	11.7	3.2	chr1	230310375	230310510	(18645912)	+	L2a	LINE/L2	3263	3417	(9)	341683
284	29.6	13.0	1.1	chr1	230310542	230310710	(18645712)	+	L2a	LINE/L2	3195	3423	(3)	341685
1659	16.9	6.5	0.3	chr1	231329244	231329563	(17626859)	+	MER2	DNA/TcMar-Tigger	2	342	(3)	343315
272	31.8	13.3	4.9	chr1	231329564	231329776	(17626646)	+	L1ME4b	LINE/L1	4772	4969	(1177)	343314
13	22.4	1.7	6.7	chr1	231421470	231421528	(17534894)	+	(GCC)n	Simple_repeat	1	60	(0)	343470
24	18.8	1.6	3.1	chr1	231421889	231421952	(17534470)	+	(GGC)n	Simple_repeat	1	65	(0)	343471
12	13.9	0.0	0.0	chr1	231422196	231422219	(17534203)	+	(GCC)n	Simple_repeat	1	24	(0)	343472
1489	13.7	0.0	0.5	chr1	231538739	231538949	(17417473)	+	AluJb	SINE/Alu	91	300	(12)	343668
21961	8.2	0.9	1.2	chr1	231657442	231660479	(17295943)	C	L1PA11	LINE/L1	(953)	5378	2349	343874
21	17.3	0.0	2.4	chr1	233613655	233613696	(15342726)	+	(CA)n	Simple_repeat	1	42	(0)	346666
28	18.4	2.9	1.4	chr1	233614033	233614102	(15342320)	+	G-rich	Low_complexity	1	72	(0)	346667
529	20.4	1.1	0.0	chr1	233716690	233716782	(15239640)	+	Tigger3a	DNA/TcMar-Tigger	1	94	(254)	346805
911	20.9	11.2	2.1	chr1	233716784	233716970	(15239452)	C	AluJr	SINE/Alu	(12)	300	95	346806
1126	17.5	6.1	2.3	chr1	233716974	233717240	(15239182)	+	L1M3	LINE/L1	5497	5749	(422)	346807
928	16.7	0.0	2.5	chr1	234373076	234373237	(14583185)	+	AluJr	SINE/Alu	145	302	(10)	347762
240	32.2	2.5	0.0	chr1	234583844	234583958	(14372464)	+	Eulor6E	DNA?	70	187	(105)	348133
2426	8.1	0.0	0.7	chr1	235505383	235505689	(13450733)	C	AluSx1	SINE/Alu	(7)	305	1	349878
613	22.6	0.6	12.8	chr1	235598264	235598328	(13358094)	+	MER5B	DNA/hAT-Charlie	1	61	(117)	350069
1974	15.1	1.6	1.9	chr1	235598329	235598639	(13357783)	+	AluJo	SINE/Alu	2	311	(1)	350070
761	21.2	9.1	3.2	chr1	235669058	235669277	(13287145)	+	MER21C	LTR/ERVL	9	324	(614)	350205
3281	15.1	5.7	3.9	chr1	235669278	235669899	(13286523)	+	MER51A	LTR/ERV1	1	634	(0)	350206
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
13	21.9	2.3	2.2	chr1	236395330	236395373	(12561049)	+	(TCCCGGC)n	Simple_repeat	1	45	(0)	351538
15	26.9	0.0	2.1	chr1	236395443	236395497	(12560925)	+	GA-rich	Low_complexity	1	53	(0)	351539
15	23.2	1.3	7.8	chr1	236395861	236395936	(12560486)	+	(GCCCCT)n	Simple_repeat	1	77	(0)	351540
27	13.2	3.3	1.6	chr1	236495510	236495569	(12460853)	+	(CCACCCT)n	Simple_repeat	1	62	(0)	351755
22	20.3	4.7	4.4	chr1	236797491	236797576	(12158846)	+	(ATGA)n	Simple_repeat	1	90	(0)	352269
784	21.1	2.1	10.9	chr1	236916961	236917216	(12039206)	C	MER106A	DNA/hAT-Charlie	(1)	235	3	352462
3091	20.1	4.3	2.1	chr1	236917217	236917736	(12038686)	+	L1MEc	LINE/L1	2243	2774	(3951)	352457
351	32.0	6.7	3.2	chr1	237803921	237804107	(11152315)	+	MIRb	SINE/MIR	60	253	(15)	353824
2415	11.4	0.0	0.0	chr1	237899684	237899980	(11056442)	+	AluSx4	SINE/Alu	1	297	(13)	353946
785	21.7	3.4	1.4	chr1	237900027	237900196	(11056226)	C	AluJo	SINE/Alu	(0)	312	137	353947
1797	16.9	4.5	0.7	chr1	238227523	238227818	(10728604)	C	AluJb	SINE/Alu	(4)	308	1	354385
1441	18.8	6.7	2.8	chr1	238488786	238489072	(10467350)	C	AluJr	SINE/Alu	(12)	300	2	354772
753	19.1	0.8	0.0	chr1	238489079	238489209	(10467213)	C	FLAM_C	SINE/Alu	(10)	133	2	354773
17	26.6	4.7	4.5	chr1	239386846	239386952	(9569470)	+	(GGCCGC)n	Simple_repeat	1	112	(0)	356036
14	14.6	0.0	3.1	chr1	240091763	240091794	(8864628)	+	(GCG)n	Simple_repeat	1	32	(0)	357135
17	21.6	2.1	0.0	chr1	240091879	240091926	(8864496)	+	(AGCCGC)n	Simple_repeat	1	49	(0)	357136
15	16.7	2.9	0.0	chr1	240092260	240092293	(8864129)	+	(GGC)n	Simple_repeat	1	35	(0)	357137
33	12.3	0.0	0.0	chr1	240092724	240092785	(8863637)	+	(GCA)n	Simple_repeat	1	62	(0)	357138
1963	16.9	3.2	2.9	chr1	240956989	240957544	(7998878)	+	MLT2A2	LTR/ERVL	1	554	(0)	358505
877	17.7	3.7	3.9	chr1	240957546	240957845	(7998577)	+	L1MC3	LINE/L1	8022	8185	(18)	358500
18	29.4	1.5	0.0	chr1	241640173	241640238	(7316184)	+	(CCGCCG)n	Simple_repeat	1	67	(0)	359586
5785	9.8	1.7	0.2	chr1	241719796	241721339	(7235083)	C	L1PA11	LINE/L1	(1)	6173	4609	359717
13	18.9	0.0	0.0	chr1	243254979	243255008	(5701414)	+	(GCG)n	Simple_repeat	1	30	(0)	362301
18	13.9	0.0	0.0	chr1	243255125	243255157	(5701265)	+	(TCG)n	Simple_repeat	1	33	(0)	362302
195	22.4	6.9	4.3	chr1	243936060	243936129	(5020293)	+	MIRb	SINE/MIR	168	239	(29)	363337
347	27.2	6.9	11.9	chr1	243936283	243936517	(5019905)	+	MIRc	SINE/MIR	31	254	(14)	363338
445	31.3	10.3	6.2	chr1	243994421	243994605	(4961817)	C	MLT1K	LTR/ERVL-MaLR	(337)	258	85	363437
2554	21.8	3.2	8.3	chr1	243994856	243995545	(4960877)	+	MER21C	LTR/ERVL	3	750	(188)	363439
2626	4.9	0.0	0.0	chr1	244299875	244300180	(4656242)	C	AluY	SINE/Alu	(5)	306	1	363927
12	17.6	2.4	4.7	chr1	244451566	244451607	(4504815)	+	(CCCGGCG)n	Simple_repeat	1	43	(0)	364208
19	24.9	1.4	4.1	chr1	244451927	244451998	(4504424)	+	(CCCGC)n	Simple_repeat	1	73	(0)	364209
3244	15.2	6.2	1.0	chr1	244519398	244519990	(4436432)	+	MER6	DNA/TcMar-Tigger	1	626	(239)	364310
1849	19.7	4.6	4.1	chr1	244520010	244520523	(4435899)	C	L1M4	LINE/L1	(863)	5283	4767	364311
21	15.5	0.0	0.0	chr1	246785306	246785341	(2171081)	+	(AC)n	Simple_repeat	1	36	(0)	368090
2386	6.6	2.9	0.3	chr1	247007224	247007524	(1948898)	+	AluSc	SINE/Alu	1	309	(0)	368519
1783	23.0	5.5	2.1	chr1	247007525	247007539	(1948883)	+	MER57E3	LTR/ERV1	465	487	(0)	368518
38	0.0	0.0	0.0	chr1	247008344	247008376	(1948046)	+	(AC)n	Simple_repeat	1	33	(0)	368520
251	22.8	0.0	0.0	chr1	247008503	247008559	(1947863)	C	MER33	DNA/hAT-Charlie	(0)	324	268	368521
2099	13.9	0.0	1.3	chr1	247008565	247008880	(1947542)	+	AluSq2	SINE/Alu	1	312	(1)	368522
1267	22.2	7.5	2.4	chr1	247077925	247078265	(1878157)	+	MER57E3	LTR/ERV1	128	487	(0)	368617
404	19.4	17.3	0.0	chr1	247079209	247079347	(1877075)	C	Charlie5	DNA/hAT-Charlie	(0)	2624	2457	368618
1751	21.9	6.8	1.7	chr1	247079361	247079768	(1876654)	C	LTR7C	LTR/ERV1	(17)	454	25	368619
12148	15.5	5.1	2.5	chr10	160130	160949	(133636473)	C	Tigger1	DNA/TcMar-Tigger	(0)	2418	1607	371224
32	0.0	0.0	0.0	chr10	160950	160979	(133636443)	+	(T)n	Simple_repeat	1	30	(0)	371225
12148	15.5	5.1	2.5	chr10	160980	162512	(133634910)	C	Tigger1	DNA/TcMar-Tigger	(812)	1606	1	371224
2026	14.4	0.3	2.0	chr10	188305	188610	(133608812)	+	AluJb	SINE/Alu	1	301	(11)	371255
328	18.0	5.2	0.6	chr10	5577018	5577803	(128219619)	+	(AC)n	Simple_repeat	1	827	(0)	377949
11	19.6	10.0	1.5	chr10	5977342	5977401	(127820021)	+	(CCAGCTC)n	Simple_repeat	1	66	(0)	378667
15	15.3	0.0	0.0	chr10	5977417	5977445	(127819977)	+	(GCA)n	Simple_repeat	1	29	(0)	378668
732	28.0	16.5	5.1	chr10	6081990	6082731	(127714691)	C	L1M7	LINE/L1	(5123)	1095	253	378869
15	4.3	8.3	0.0	chr10	6722011	6722034	(127075388)	+	(AC)n	Simple_repeat	1	26	(0)	379964
429	31.7	0.0	6.6	chr10	6722043	6722316	(127075106)	+	CR1-16_AMi	LINE/CR1	315	552	(299)	379965
693	30.4	5.8	3.3	chr10	7075401	7075819	(126721603)	+	HAL1	LINE/L1	1993	2422	(85)	380507
901	26.2	13.2	2.8	chr10	7075833	7076263	(126721159)	+	LTR16C	LTR/ERVL	6	488	(1)	380508
197	36.2	3.8	11.9	chr10	11569474	11569674	(122227748)	C	L2c	LINE/L2	(155)	3232	3049	387083
282	32.6	12.0	11.8	chr10	11569930	11570353	(122227069)	+	L2c	LINE/L2	2963	3387	(0)	387084
330	36.8	2.2	7.6	chr10	11689423	11689498	(122107924)	C	HAL1b	LINE/L1	(2285)	136	65	387329
1747	13.0	7.1	0.4	chr10	11689499	11689802	(122107620)	C	AluJo	SINE/Alu	(0)	312	1	387331
330	36.8	2.2	7.6	chr10	11689803	11689868	(122107554)	C	HAL1b	LINE/L1	(2357)	64	2	387329
1047	10.3	0.0	0.0	chr10	12068364	12068499	(121728923)	C	AluSx	SINE/Alu	(176)	136	1	388081
23	0.0	0.0	0.0	chr10	17923560	17923584	(115873838)	+	(A)n	Simple_repeat	1	25	(0)	398268
19994	9.9	1.9	0.7	chr10	17968657	17970674	(115826748)	C	L1MA2	LINE/L1	(4)	7719	5663	398337
180	24.1	13.9	4.4	chr10	19019203	19019293	(114778129)	+	UCON71_Crp	Unknown	172	272	(5)	399990
976	28.6	5.1	1.2	chr10	19759652	19759991	(114037431)	C	L1MCa	LINE/L1	(5091)	1332	979	401069
18	7.0	6.7	0.0	chr10	21031194	21031223	(112766199)	+	(AG)n	Simple_repeat	1	32	(0)	402865
2269	11.6	0.0	0.0	chr10	21330957	21331258	(112466164)	C	AluSg	SINE/Alu	(8)	302	1	403428
4571	14.7	1.6	1.4	chr10	21796270	21797481	(111999941)	C	L1MB1	LINE/L1	(342)	5826	4612	404342
14	11.7	2.3	6.8	chr10	22340648	22340690	(111456732)	+	G-rich	Low_complexity	1	44	(0)	405128
1267	4.7	0.7	0.0	chr10	23702845	23702993	(110094429)	C	AluYk11	SINE/Alu	(129)	182	33	407327
501	25.8	7.9	3.1	chr10	24327434	24327488	(109469934)	C	MIR	SINE/MIR	(45)	217	162	408319
1929	12.6	4.5	0.0	chr10	24327489	24327766	(109469656)	C	AluJo	SINE/Alu	(10)	302	12	408320
350	33.5	7.2	1.8	chr10	25565578	25565747	(108231675)	+	MIR3	SINE/MIR	9	188	(20)	410368
4989	8.0	2.9	0.1	chr10	25565751	25566450	(108230972)	C	LTR30	LTR/ERV1	(2)	720	1	410369
1041	24.5	3.1	0.0	chr10	29672113	29672328	(104125094)	+	MER58A	DNA/hAT-Charlie	1	223	(1)	417239
785	16.8	0.0	0.0	chr10	29672384	29672502	(104124920)	+	AluJb	SINE/Alu	193	311	(1)	417240
222	28.6	1.4	4.1	chr10	29672557	29672629	(104124793)	+	MIRb	SINE/MIR	181	251	(17)	417241
11	24.1	0.0	0.0	chr10	30434680	30434713	(103362709)	+	(CCGCTG)n	Simple_repeat	1	34	(0)	418706
22	10.5	0.0	0.0	chr10	31206486	31206516	(102590906)	+	(A)n	Simple_repeat	1	31	(0)	420011
1889	18.0	0.0	0.7	chr10	31206555	31206854	(102590568)	C	AluJr4	SINE/Alu	(12)	300	3	420012
18	17.8	2.2	2.1	chr10	31319443	31319488	(102477934)	+	(CCG)n	Simple_repeat	1	47	(0)	420165
16	26.5	1.6	3.2	chr10	31319540	31319601	(102477821)	+	(CCG)n	Simple_repeat	1	63	(0)	420165
246	26.3	1.3	0.0	chr10	31896415	31896490	(101900932)	C	Tigger15a	DNA/TcMar-Tigger	(351)	364	288	420927
296	19.5	2.5	1.3	chr10	31896666	31896743	(101900679)	+	L1MD	LINE/L1	4251	4329	(1817)	420928
2040	27.7	5.5	5.7	chr10	31896764	31897843	(101899579)	+	L1MCb	LINE/L1	2	1079	(4966)	420929
251	29.4	1.4	0.0	chr10	32446709	32446776	(101350646)	+	MIR	SINE/MIR	147	215	(47)	422004
17	0.0	0.0	0.0	chr10	32446883	32446904	(101350518)	+	(TGCC)n	Simple_repeat	1	22	(0)	422005
47	6.2	1.4	2.7	chr10	32446905	32446977	(101350445)	+	(CCTC)n	Simple_repeat	1	74	(0)	422006
269	23.5	10.6	0.8	chr10	33005964	33006091	(100791331)	C	MIRc	SINE/MIR	(73)	195	56	422615
312	34.4	4.8	1.3	chr10	33580420	33580578	(100216844)	+	L2	LINE/L2	2647	2811	(608)	423463
1666	25.6	6.4	2.7	chr10	33580589	33581318	(100216104)	C	ERV3-16A3_I-int	LTR/ERVL	(1022)	4204	3421	423464
1545	16.0	7.1	0.4	chr10	35519761	35520064	(98277358)	C	AluJb	SINE/Alu	(0)	312	1	426680
270	28.6	3.9	1.0	chr10	42475384	42475482	(91321940)	C	REP522	Satellite/telo	(862)	955	854	432132
2006	11.8	3.6	0.0	chr10	42637656	42637951	(91159471)	C	AluSp	SINE/Alu	(6)	307	1	432328
1433	11.3	4.4	3.2	chr10	43407937	43408183	(90389239)	C	AluJb	SINE/Alu	(23)	289	40	433436
13	14.1	5.8	5.5	chr10	43420568	43420619	(90376803)	+	G-rich	Low_complexity	1	55	(0)	433467
1697	12.2	5.8	1.4	chr10	43420660	43420938	(90376484)	C	AluJo	SINE/Alu	(20)	292	1	433468
2187	21.1	6.7	9.7	chr10	43655125	43655779	(90141643)	+	MER77B	LTR/ERVL	1	655	(45)	433937
1967	17.8	0.0	2.8	chr10	43655780	43656100	(90141322)	+	AluJb	SINE/Alu	1	312	(0)	433938
2187	21.1	6.7	9.7	chr10	43656101	43656167	(90141255)	+	MER77B	LTR/ERVL	656	700	(0)	433937
907	27.0	14.1	1.4	chr10	44266055	44266494	(89530928)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	434648
14	8.1	0.0	6.7	chr10	45594704	45594733	(88202689)	+	(GGC)n	Simple_repeat	1	30	(0)	436272
24	27.6	5.6	1.8	chr10	46106989	46107149	(87690273)	+	(TC)n	Simple_repeat	1	167	(0)	437211
999	15.2	9.3	2.2	chr10	46255904	46256131	(87541291)	+	MER65A	LTR/ERV1	200	445	(0)	437401
217	34.2	2.5	4.9	chr10	46256666	46256762	(87540660)	+	MIR	SINE/MIR	41	137	(125)	437402
15	20.1	0.0	0.0	chr10	48306885	48306918	(85490504)	+	(GCC)n	Simple_repeat	1	34	(0)	440379
27	0.0	0.0	0.0	chr10	52072159	52072184	(81725238)	+	(T)n	Simple_repeat	1	26	(0)	445788
187	21.1	5.5	1.9	chr10	52072238	52072290	(81725132)	+	MIRb	SINE/MIR	176	230	(38)	445789
32	2.9	0.0	0.0	chr10	52072331	52072365	(81725057)	+	(CAAAA)n	Simple_repeat	1	35	(0)	445790
217	27.9	6.5	2.3	chr10	52779821	52779908	(81017514)	+	MIR1_Amn	SINE/MIR	59	150	(80)	446760
14323	17.3	5.3	4.3	chr10	54699993	54705324	(79092098)	+	L1PA15	LINE/L1	1380	6780	(5)	449224
754	18.5	3.4	12.3	chr10	55367206	55367298	(78430124)	C	MER57E1	LTR/ERV1	(0)	411	323	450076
1664	22.4	0.0	0.0	chr10	55367299	55367610	(78429812)	+	AluJo	SINE/Alu	1	312	(0)	450077
969	20.8	5.5	5.9	chr10	55367611	55367899	(78429523)	C	MER57E1	LTR/ERV1	(89)	322	1	450076
2402	9.0	0.0	0.6	chr10	55467684	55467994	(78329428)	+	AluY	SINE/Alu	1	309	(2)	450214
3518	13.2	3.6	7.3	chr10	56370291	56370992	(77426430)	+	LTR76	LTR/ERV1	1	675	(0)	451363
413	11.7	0.0	0.0	chr10	56370996	56371055	(77426367)	+	AluJo	SINE/Alu	242	301	(11)	451364
2313	27.1	6.6	8.4	chr10	56371056	56371610	(77425812)	C	L1MB7	LINE/L1	(508)	5673	5037	451361
5614	13.2	0.5	0.7	chr10	56569918	56570733	(77226689)	C	THE1D-int	LTR/ERVL-MaLR	(71)	1560	747	451618
381	31.9	0.6	1.8	chr10	56570783	56570948	(77226474)	+	L2	LINE/L2	1720	1883	(1536)	451620
2453	9.4	0.0	0.7	chr10	62938499	62938795	(70858627)	C	AluSx1	SINE/Alu	(13)	299	5	460853
235	38.6	10.6	1.9	chr10	62938796	62939164	(70858258)	+	L2a	LINE/L2	1911	2320	(1099)	460852
224	27.1	2.4	5.9	chr10	63585196	63585276	(70212146)	C	L2c	LINE/L2	(39)	3348	3250	462048
577	32.4	6.3	0.0	chr10	63923194	63923415	(69874007)	+	MIRb	SINE/MIR	14	250	(18)	462642
3298	15.5	3.6	5.1	chr10	67843323	67843642	(65953780)	+	MSTA-int	LTR/ERVL-MaLR	1046	1361	(270)	468015
2294	11.4	0.0	0.3	chr10	67843643	67843950	(65953472)	C	AluSx	SINE/Alu	(4)	308	2	468019
34	24.0	2.1	5.6	chr10	67884874	67885014	(65912408)	+	(CGGCGG)n	Simple_repeat	1	144	(0)	468131
20	24.9	1.8	0.0	chr10	67885083	67885139	(65912283)	+	(ACG)n	Simple_repeat	1	58	(0)	468132
19	14.2	0.0	0.0	chr10	67885479	67885509	(65911913)	+	(T)n	Simple_repeat	1	31	(0)	468133
1594	12.6	5.4	7.0	chr10	68330857	68331158	(65466264)	C	AluJb	SINE/Alu	(15)	297	1	468966
2312	8.4	0.7	1.0	chr10	68407737	68408044	(65389378)	C	AluSc	SINE/Alu	(2)	307	1	469130
1259	23.3	10.4	6.7	chr10	69468828	69469455	(64327967)	+	MER21C	LTR/ERVL	1	722	(209)	471678
472	23.2	6.8	1.3	chr10	69704733	69704885	(64092537)	C	L1ME2	LINE/L1	(790)	5356	5195	472095
633	14.3	1.9	0.0	chr10	69704887	69704991	(64092431)	C	AluJb	SINE/Alu	(0)	312	206	472099
656	21.5	0.0	1.6	chr10	69705068	69705190	(64092232)	C	AluJb	SINE/Alu	(107)	205	85	472099
224	34.0	12.6	0.9	chr10	70169947	70170157	(63627265)	+	MIRc	SINE/MIR	26	264	(4)	472878
2212	10.9	0.7	0.7	chr10	70170899	70171226	(63626196)	C	AluSz	SINE/Alu	(0)	312	2	472879
275	11.6	2.3	0.0	chr10	70232747	70232789	(63564633)	+	MIR3	SINE/MIR	113	156	(52)	473005
258	29.5	16.8	1.5	chr10	70771746	70772072	(63025350)	+	L2a	LINE/L2	2635	3021	(398)	474096
466	26.5	11.9	4.0	chr10	70772150	70772373	(63025049)	+	L2a	LINE/L2	3183	3426	(0)	474096
12	6.4	5.3	7.5	chr10	70809130	70809167	(62988255)	+	(TCCTGC)n	Simple_repeat	1	40	(0)	474144
3992	26.8	6.3	5.0	chr10	72877535	72878111	(60919311)	+	L1ME3B	LINE/L1	160	717	(5525)	478212
1720	18.7	0.7	1.4	chr10	72878112	72878420	(60919002)	C	AluJb	SINE/Alu	(0)	312	1	478213
2274	10.5	1.9	0.3	chr10	74010888	74011191	(59786231)	+	AluSq2	SINE/Alu	1	309	(4)	480387
309	28.0	6.5	7.9	chr10	74328209	74328355	(59469067)	C	L1MA6	LINE/L1	(4324)	3241	3102	481013
238	27.4	11.8	3.6	chr10	74328367	74328476	(59468946)	C	L1MA6	LINE/L1	(5029)	1536	1413	481013
2447	12.7	0.8	1.1	chr10	74328477	74328858	(59468564)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	481018
193	29.9	3.4	8.3	chr10	76103253	76103409	(57694013)	+	L3	LINE/CR1	3853	4001	(98)	484063
267	26.9	8.4	1.4	chr10	77419566	77419708	(56377714)	+	L1ME3B	LINE/L1	6089	6242	(0)	485877
204	29.1	14.0	2.3	chr10	77419888	77419975	(56377447)	C	L2	LINE/L2	(2301)	1118	1019	485878
812	22.5	8.8	0.0	chr10	77719372	77719558	(56077864)	C	MIR	SINE/MIR	(8)	254	50	486476
595	30.3	10.4	2.4	chr10	77719570	77719860	(56077562)	C	MamGypLTR3a	LTR/Gypsy	(69)	912	596	486477
1875	13.1	0.0	0.4	chr10	77719872	77720138	(56077284)	C	AluSz	SINE/Alu	(8)	304	39	486478
644	28.2	7.3	5.9	chr10	78610814	78611069	(55186353)	C	MamRep38	DNA/hAT	(22)	273	14	488132
16	23.6	3.3	3.2	chr10	79068720	79068780	(54728642)	+	A-rich	Low_complexity	1	63	(0)	488998
17	6.8	6.5	0.0	chr10	79068813	79068843	(54728579)	+	(GCG)n	Simple_repeat	1	33	(0)	488999
26	24.4	5.0	1.9	chr10	79069020	79069120	(54728302)	+	(AGCG)n	Simple_repeat	1	106	(0)	489000
14	7.8	0.0	6.5	chr10	79069140	79069170	(54728252)	+	(CGGAG)n	Simple_repeat	1	31	(0)	489001
16	17.2	2.4	2.4	chr10	79069217	79069257	(54728165)	+	(CGG)n	Simple_repeat	1	42	(0)	489002
302	25.3	8.4	0.0	chr10	79347073	79347159	(54450263)	C	MamRep4096	DNA/hAT-Tip100	(0)	426	332	489468
15	14.2	3.0	10.1	chr10	79347551	79347617	(54449805)	+	(GCTGC)n	Simple_repeat	1	69	(0)	489469
454	25.2	0.0	0.0	chr10	80416748	80416854	(53380568)	C	MER5A1	DNA/hAT-Charlie	(0)	166	60	491185
390	34.5	4.6	2.4	chr10	80663135	80663303	(53134119)	+	MIR3	SINE/MIR	35	207	(1)	491586
11280	17.3	3.3	7.9	chr10	84278150	84279959	(49517463)	+	L1MD2	LINE/L1	3857	5695	(842)	496613
12	13.1	2.7	5.3	chr10	84328975	84329011	(49468411)	+	G-rich	Low_complexity	1	38	(0)	496707
1887	14.3	1.6	4.8	chr10	84335229	84335543	(49461879)	C	AluJb	SINE/Alu	(7)	305	1	496716
18	24.2	4.2	5.0	chr10	86377301	86377396	(47420026)	+	(CGCAGG)n	Simple_repeat	1	100	(0)	499385
961	23.1	6.0	0.8	chr10	86377574	86377809	(47419613)	C	MIR	SINE/MIR	(3)	259	11	499386
413	22.0	16.0	1.1	chr10	87537551	87537622	(46259800)	C	L1ME1	LINE/L1	(862)	5457	5372	501431
274	20.6	9.3	4.0	chr10	87537647	87537747	(46259675)	C	L1ME1	LINE/L1	(5754)	646	540	501431
1201	18.6	2.2	12.1	chr10	87537773	87538078	(46259344)	C	AluJr	SINE/Alu	(15)	297	23	501434
13	17.6	2.4	4.7	chr10	87659773	87659814	(46137608)	+	GA-rich	Low_complexity	1	43	(0)	501619
28	0.0	0.0	0.0	chr10	87659882	87659907	(46137515)	+	(GCT)n	Simple_repeat	1	26	(0)	501620
13	0.0	0.0	0.0	chr10	87659908	87659924	(46137498)	+	(CGC)n	Simple_repeat	1	17	(0)	501621
701	29.0	2.9	2.9	chr10	88991924	88992161	(44805261)	C	MIRb	SINE/MIR	(16)	252	15	503687
241	33.0	4.8	2.5	chr10	89260283	89260403	(44537019)	C	L2b	LINE/L2	(8)	3367	3244	504114
5550	5.4	0.4	0.0	chr10	91370272	91371013	(42426409)	C	L1PA4	LINE/L1	(2234)	3912	3168	507223
17	13.2	0.0	0.0	chr10	92239505	92239537	(41557885)	+	(CACACC)n	Simple_repeat	1	33	(0)	508663
13	16.6	0.0	0.0	chr10	92239646	92239672	(41557750)	+	(GGC)n	Simple_repeat	1	27	(0)	508664
23	13.7	0.0	0.0	chr10	92240246	92240314	(41557108)	+	(GCT)n	Simple_repeat	1	69	(0)	508665
273	28.2	16.1	3.2	chr10	93139372	93139543	(40657879)	+	MIRb	SINE/MIR	20	214	(54)	510524
28	0.0	0.0	0.0	chr10	93702523	93702548	(40094874)	+	(CCG)n	Simple_repeat	1	26	(0)	511624
22	29.4	1.3	0.0	chr10	94402731	94402759	(39394663)	+	(GGCGGA)n	Simple_repeat	1	73	(0)	512920
23	15.7	0.0	0.0	chr10	94402760	94402802	(39394620)	+	GA-rich	Low_complexity	1	43	(0)	512921
21	6.1	2.9	0.0	chr10	94403609	94403642	(39393780)	+	(CGGGGC)n	Simple_repeat	1	35	(0)	512922
26	3.1	3.0	0.0	chr10	94403651	94403683	(39393739)	+	(GGAGCC)n	Simple_repeat	1	34	(0)	512923
2090	17.6	0.0	1.3	chr10	94428280	94428591	(39368831)	C	AluJb	SINE/Alu	(4)	308	1	512971
13	21.8	2.7	0.0	chr10	95183860	95183896	(38613526)	+	(CGC)n	Simple_repeat	1	38	(0)	513856
12	24.2	3.5	3.4	chr10	95184025	95184081	(38613341)	+	(CAGGAG)n	Simple_repeat	1	59	(0)	513857
183	31.0	9.4	2.2	chr10	97406382	97406470	(36390952)	+	MIRc	SINE/MIR	38	133	(135)	517909
183	22.2	0.0	0.0	chr10	98608234	98608269	(35189153)	C	MIRc	SINE/MIR	(115)	153	118	520211
21	20.9	1.6	3.1	chr10	100969452	100969515	(32827907)	+	(CCCCGC)n	Simple_repeat	1	65	(0)	524273
1588	2.7	1.1	0.0	chr10	102583709	102583894	(31213528)	C	L1PA4	LINE/L1	(1)	6154	5967	527226
234	28.9	4.2	5.3	chr10	102584143	102584237	(31213185)	C	MIRc	SINE/MIR	(144)	124	31	527227
909	13.4	1.5	0.0	chr10	102584347	102584480	(31212942)	C	FLAM_C	SINE/Alu	(7)	136	1	527228
13	28.6	1.8	1.7	chr10	103368202	103368258	(30429164)	+	(CGCCGG)n	Simple_repeat	1	58	(0)	528833
15	20.3	5.9	0.0	chr10	103368447	103368497	(30428925)	+	(CCTCGGCC)n	Simple_repeat	1	54	(0)	528834
17	24.7	3.3	3.2	chr10	104121880	104121940	(29675482)	+	(CG)n	Simple_repeat	1	63	(0)	530197
30	19.3	3.5	2.2	chr10	110919488	110919573	(22877849)	+	G-rich	Low_complexity	1	89	(0)	540372
24	9.6	0.0	6.0	chr10	110919593	110919642	(22877780)	+	GA-rich	Low_complexity	1	50	(0)	540373
16	16.1	2.2	4.3	chr10	113126886	113126931	(20670491)	+	(GCGG)n	Simple_repeat	1	45	(0)	543814
12	17.2	4.9	2.3	chr10	114043807	114043847	(19753575)	+	G-rich	Low_complexity	1	43	(0)	545302
34	10.4	4.8	0.0	chr10	114043898	114043960	(19753462)	+	(GCAGCG)n	Simple_repeat	1	66	(0)	545303
30	23.6	0.0	1.3	chr10	114043961	114043974	(19753448)	+	(GCG)n	Simple_repeat	1	77	(0)	545304
12	29.0	3.0	2.9	chr10	114044187	114044252	(19753170)	+	(GCC)n	Simple_repeat	1	68	(0)	545305
181	35.5	0.0	4.1	chr10	114179830	114179926	(19617496)	C	L2b	LINE/L2	(20)	3355	3263	545521
207	34.6	5.5	6.1	chr10	114179945	114180107	(19617315)	+	MIR1_Amn	SINE/MIR	1	162	(68)	545522
2843	20.5	6.0	9.0	chr10	116986161	116986601	(16810821)	+	L1MCa	LINE/L1	5	445	(6063)	549670
13	23.4	5.8	2.4	chr10	117137134	117137195	(16660227)	+	G-rich	Low_complexity	1	64	(0)	549930
275	28.6	2.1	3.2	chr10	117279800	117279893	(16517529)	+	Charlie24	DNA/hAT-Charlie	2357	2449	(1)	550178
1224	24.1	4.6	7.7	chr10	118495317	118495864	(15301558)	+	MLT1E	LTR/ERVL-MaLR	1	640	(13)	552141
881	20.5	3.4	2.4	chr10	118496075	118496279	(15301143)	C	MER3	DNA/hAT-Charlie	(0)	209	3	552142
16	21.7	0.0	0.0	chr10	119079980	119080011	(14717411)	+	A-rich	Low_complexity	1	32	(0)	553159
609	27.2	8.9	5.5	chr10	119414553	119414789	(14382633)	+	MIR	SINE/MIR	3	248	(14)	553863
16	8.7	0.0	0.0	chr10	119726064	119726088	(14071334)	+	(GCC)n	Simple_repeat	1	25	(0)	554474
7624	2.7	1.2	0.1	chr10	120947975	120948976	(12848446)	C	L1PA4	LINE/L1	(0)	6155	5144	556408
25	20.7	0.0	6.2	chr10	120949098	120949178	(12848244)	+	(TCCGGC)n	Simple_repeat	1	81	(0)	556409
18	10.5	0.0	0.0	chr10	121975069	121975099	(11822323)	+	(GGGAGC)n	Simple_repeat	1	31	(0)	558054
14	15.2	0.0	7.1	chr10	121975098	121975152	(11822270)	+	(GGCCGC)n	Simple_repeat	1	51	(0)	558055
12	24.2	3.5	3.4	chr10	121975232	121975288	(11822134)	+	(GCGCCA)n	Simple_repeat	1	59	(0)	558056
1845	18.4	13.5	1.3	chr10	123731972	123732361	(10065061)	C	MER21C	LTR/ERVL	(493)	445	1	560821
786	30.6	5.9	2.0	chr10	123732423	123732779	(10064643)	C	LTR16A2	LTR/ERVL	(3)	492	121	560822
16	15.4	2.8	0.0	chr10	124461792	124461827	(9335595)	+	(GCGCCG)n	Simple_repeat	1	37	(0)	561977
19	10.4	4.7	2.2	chr10	124462052	124462094	(9335328)	+	G-rich	Low_complexity	1	45	(0)	561978
2385	6.7	0.0	0.0	chr10	124801228	124801537	(8995885)	C	AluSp	SINE/Alu	(0)	313	2	562494
2319	12.7	0.5	2.4	chr10	125374098	125374476	(8422946)	C	MLT1B	LTR/ERVL-MaLR	(14)	376	5	563422
1380	18.5	15.0	5.3	chr10	125708632	125709270	(8088152)	+	LTR48	LTR/ERV1	1	644	(0)	563903
234	31.7	13.5	3.1	chr10	126240376	126240766	(7556656)	C	L2a	LINE/L2	(54)	3372	2935	564595
2515	7.2	0.0	0.0	chr10	129756461	129756765	(4040657)	C	AluSx4	SINE/Alu	(3)	307	3	568769
108	25.6	2.8	4.1	chr10	132149517	132149945	(1647477)	+	(CCCTC)n	Simple_repeat	1	441	(0)	571381
12	13.6	6.8	4.3	chr10	132223018	132223061	(1574361)	+	(GCCCACCA)n	Simple_repeat	1	47	(0)	571430
16	17.6	2.0	4.0	chr10	133378578	133378626	(418796)	+	(CTTTGTA)n	Simple_repeat	1	50	(0)	572459
15	17.1	0.0	0.0	chr10	133378646	133378678	(418744)	+	(CACGCG)n	Simple_repeat	1	33	(0)	572460
705	24.2	3.5	6.8	chr10	133447259	133447524	(349898)	C	L1MDa	LINE/L1	(2132)	4405	4149	572531
10596	15.2	2.1	2.1	chr10	133447544	133450304	(347118)	+	L1MA5	LINE/L1	2536	6530	(472)	572532
284	20.4	2.3	2.1	chr10	133520013	133520101	(277321)	+	L1ME3D	LINE/L1	5963	6055	(188)	572594
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
8705	1.0	24.2	0.0	chr10	133785742	133787104	(10318)	+	TAR1	Satellite/telo	314	2111	(0)	572857
3202	14.2	5.9	1.4	chr11	189420	190371	(134896251)	C	TAR1	Satellite/telo	(1043)	995	1	573066
481	26.2	9.8	2.2	chr11	368467	368739	(134717883)	+	MLT1G	LTR/ERVL-MaLR	291	586	(5)	573333
16	30.5	0.0	0.0	chr11	369033	369080	(134717542)	+	(CC)n	Simple_repeat	1	48	(0)	573334
75	24.5	1.2	4.3	chr11	369185	369438	(134717184)	+	(CCCGCGC)n	Simple_repeat	1	257	(0)	573335
12	16.0	0.0	3.3	chr11	833440	833469	(134253153)	+	(GGC)n	Simple_repeat	1	30	(0)	574003
1821	24.8	7.2	0.4	chr11	1327054	1327542	(133759080)	+	L1ME1	LINE/L1	99	623	(5777)	574481
8465	26.1	4.5	3.0	chr11	1327545	1329596	(133757026)	+	L1ME1	LINE/L1	2545	4635	(1684)	574481
2070	17.8	3.1	2.6	chr11	3378319	3378739	(131707883)	+	MER57E3	LTR/ERV1	65	487	(0)	576928
14	20.3	0.0	10.1	chr11	3423223	3423291	(131663331)	+	(GGCGG)n	Simple_repeat	1	69	(0)	577000
15	30.9	0.0	5.1	chr11	3423415	3423493	(131663129)	+	G-rich	Low_complexity	1	79	(0)	577001
433	31.4	4.7	8.2	chr11	3423721	3423963	(131662659)	C	L2c	LINE/L2	(3)	3384	3151	577002
14761	17.6	9.9	5.1	chr11	4522282	4523931	(130562691)	+	L1MA2	LINE/L1	16	1791	(5774)	578897
19392	11.6	2.8	2.0	chr11	6582056	6585273	(128501349)	+	L1MA3	LINE/L1	3433	6720	(845)	581538
286	31.8	8.3	5.5	chr11	9686250	9686335	(125400287)	C	L1ME3G	LINE/L1	(193)	731	632	586352
33	0.0	2.6	2.5	chr11	9686336	9686374	(125400248)	+	(TTTA)n	Simple_repeat	1	40	(0)	586353
1805	15.1	4.2	0.0	chr11	9686378	9686648	(125399974)	C	AluJb	SINE/Alu	(29)	283	1	586354
1928	18.7	0.0	0.7	chr11	10238126	10238430	(124848192)	+	AluJb	SINE/Alu	1	303	(9)	587227
352	26.0	16.2	3.5	chr11	10238431	10238621	(124848001)	+	L1MEg	LINE/L1	2296	2527	(3619)	587224
15	13.9	0.0	0.0	chr11	10809786	10809809	(124276813)	+	(T)n	Simple_repeat	1	24	(0)	588159
19	25.9	0.0	1.8	chr11	11841953	11842009	(123244613)	+	(GGC)n	Simple_repeat	1	57	(0)	589842
11	31.1	0.0	0.0	chr11	14358618	14358661	(120727961)	+	(CGCCCC)n	Simple_repeat	1	44	(0)	593747
15	22.1	4.9	3.1	chr11	14358682	14358742	(120727880)	+	(CGC)n	Simple_repeat	1	64	(0)	593748
12	12.1	7.9	2.4	chr11	14358947	14358984	(120727638)	+	G-rich	Low_complexity	1	41	(0)	593749
14	27.4	0.0	2.0	chr11	14359322	14359371	(120727251)	+	(AGTGTG)n	Simple_repeat	1	50	(0)	593750
13	30.2	0.0	6.9	chr11	14644665	14644751	(120441871)	+	(TGGTGC)n	Simple_repeat	1	87	(0)	594298
21566	14.1	2.8	2.0	chr11	17035859	17038354	(118048268)	+	L1M1	LINE/L1	18	2572	(4993)	597931
348	13.2	0.0	3.0	chr11	17276077	17276152	(117810470)	+	MIR3	SINE/MIR	96	166	(102)	598469
829	23.5	10.0	1.7	chr11	17527948	17528185	(117558437)	+	MIR	SINE/MIR	3	262	(0)	598905
317	26.5	7.1	0.7	chr11	17528372	17528520	(117558102)	C	MIR3	SINE/MIR	(81)	187	27	598906
19	28.6	3.5	1.1	chr11	22829842	22829927	(112256695)	+	(GCCCC)n	Simple_repeat	1	89	(0)	607508
9396	16.7	0.8	1.1	chr11	25104934	25106569	(109980053)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	610635
2237	19.2	3.0	1.1	chr11	30752406	30752874	(104333748)	C	LTR45B	LTR/ERV1	(14)	511	1	618973
15221	8.6	0.5	1.2	chr11	32866119	32868135	(102218487)	+	L1PREC2	LINE/L1	3294	5305	(841)	622369
1574	14.8	0.0	0.0	chr11	33251468	33251697	(101834925)	+	AluJb	SINE/Alu	83	312	(0)	623148
17	24.2	0.0	0.0	chr11	33251698	33251741	(101834881)	+	A-rich	Low_complexity	1	44	(0)	623149
19	20.9	5.9	1.4	chr11	33257311	33257378	(101829244)	+	(GGCGGA)n	Simple_repeat	1	72	(0)	623167
19	0.0	3.3	3.2	chr11	33257658	33257687	(101828935)	+	(AGC)n	Simple_repeat	1	31	(0)	623168
2201	10.5	0.0	0.0	chr11	34790346	34790648	(100295974)	C	AluSg	SINE/Alu	(0)	310	5	625817
783	30.2	10.1	6.1	chr11	34790649	34791007	(100295615)	+	MLT1H1	LTR/ERVL-MaLR	168	550	(5)	625816
250	41.3	3.2	4.7	chr11	34791038	34791230	(100295392)	+	L2a	LINE/L2	2993	3182	(193)	625815
292	17.2	0.0	0.0	chr11	34791234	34791298	(100295324)	C	L2a	LINE/L2	(3)	3423	3320	625818
251	30.8	5.4	3.7	chr11	34791348	34791490	(100295132)	+	L2a	LINE/L2	3256	3407	(19)	625815
11919	9.1	0.2	0.1	chr11	36521584	36523161	(98563461)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	628569
9049	14.0	4.5	0.5	chr11	38097220	38098735	(96987887)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	630767
12	19.7	0.0	0.0	chr11	43711445	43711473	(91375149)	+	(GTTT)n	Simple_repeat	1	29	(0)	638881
1997	17.3	0.0	0.0	chr11	43711475	43711774	(91374848)	C	AluJb	SINE/Alu	(12)	300	1	638882
3690	22.5	4.5	1.9	chr11	45588103	45589077	(89497545)	+	L1MC4a	LINE/L1	6871	7871	(11)	642423
23	27.5	4.4	2.5	chr11	46381538	46381651	(88704971)	+	G-rich	Low_complexity	1	119	(0)	643863
29	3.0	0.0	0.0	chr11	46616832	46616865	(88469757)	+	(A)n	Simple_repeat	1	34	(0)	644306
2044	16.7	3.0	1.6	chr11	49106305	49106669	(85979953)	+	L1PA15-16	LINE/L1	1235	1604	(5249)	648506
520	12.0	1.4	2.3	chr11	49106639	49106740	(85979882)	+	L1PB	LINE/L1	4813	4918	(1228)	648507
1692	16.4	6.3	0.0	chr11	49106746	49107026	(85979596)	+	MER1B	DNA/hAT-Charlie	40	339	(0)	648508
225	25.0	5.7	2.9	chr11	49107079	49107181	(85979441)	+	L1PA15-16	LINE/L1	1621	1726	(5127)	648506
10309	3.3	0.4	8.5	chr11	57943192	57944632	(77141990)	C	SVA_B	Retroposon/SVA	(0)	1383	60	654743
2406	4.0	3.0	2.3	chr11	59549924	59550225	(75536397)	C	AluY	SINE/Alu	(7)	304	1	656944
681	0.0	0.0	0.0	chr11	59550629	59550701	(75535921)	C	tRNA-Val-GTA	tRNA	(3)	73	1	656945
2124	9.5	3.2	1.0	chr11	61391207	61391252	(73695370)	+	AluSq2	SINE/Alu	1	47	(266)	660081
32	0.0	0.0	0.0	chr11	61391253	61391282	(73695340)	+	(G)n	Simple_repeat	1	30	(0)	660082
2124	9.5	3.2	1.0	chr11	61391283	61391540	(73695082)	+	AluSq2	SINE/Alu	48	311	(2)	660081
28	7.9	0.0	0.0	chr11	62726895	62726934	(72359688)	+	(CCT)n	Simple_repeat	1	40	(0)	662641
285	34.3	9.0	1.7	chr11	62842221	62842395	(72244227)	+	MIRb	SINE/MIR	3	191	(77)	662923
1160	22.8	7.5	4.5	chr11	62842647	62843022	(72243600)	C	LTR65	LTR/ERV1	(97)	572	185	662924
13	11.6	4.9	4.7	chr11	64185451	64185491	(70901131)	+	(GCCGGAG)n	Simple_repeat	1	43	(0)	665142
1433	14.8	0.0	0.9	chr11	64846771	64846987	(70239635)	C	AluJr	SINE/Alu	(23)	289	75	666328
2037	13.3	1.9	1.6	chr11	65817280	65817587	(69269035)	+	AluJr	SINE/Alu	1	309	(3)	668223
12	23.1	2.3	2.3	chr11	66052068	66052110	(69034512)	+	(GCCC)n	Simple_repeat	1	44	(0)	668735
2367	7.5	1.0	1.0	chr11	67072033	67072338	(68014284)	C	AluSx	SINE/Alu	(6)	306	1	670870
11274	13.9	3.7	4.0	chr11	67331685	67331765	(67754857)	+	Tigger2	DNA/TcMar-Tigger	1075	1147	(1571)	671428
1958	15.7	0.0	5.2	chr11	67331766	67332090	(67754532)	+	AluJb	SINE/Alu	1	308	(4)	671432
11274	13.9	3.7	4.0	chr11	67332091	67332431	(67754191)	+	Tigger2	DNA/TcMar-Tigger	1148	1501	(1217)	671428
2435	8.6	0.3	0.6	chr11	69686227	69686540	(65400082)	C	AluSq	SINE/Alu	(0)	313	1	675494
2214	21.7	6.5	0.9	chr11	70584306	70584830	(64501792)	+	MER74A	LTR/ERVL	3	558	(0)	677053
695	29.9	8.7	2.1	chr11	71240873	71241292	(63845330)	+	L1M5	LINE/L1	5348	5797	(326)	677927
196	33.9	7.3	0.0	chr11	71448790	71448904	(63637718)	C	L2a	LINE/L2	(53)	3373	3250	678282
248	22.5	11.9	5.1	chr11	71448939	71449055	(63637567)	C	LTR16A	LTR/ERVL	(32)	419	294	678283
307	27.1	16.4	0.0	chr11	71449071	71449203	(63637419)	C	LTR16A	LTR/ERVL	(290)	161	3	678283
9226	8.3	4.5	0.3	chr11	72905280	72907598	(62179024)	C	L1PA6	LINE/L1	(1)	6304	3888	680831
365	30.6	3.0	0.0	chr11	73201103	73201262	(61885360)	+	L1ME4a	LINE/L1	5960	6124	(0)	681378
1277	11.3	4.5	7.6	chr11	73457410	73457592	(61629030)	+	L1MB4	LINE/L1	5965	6140	(40)	681874
896	18.4	10.1	0.7	chr11	73457595	73457746	(61628876)	+	FRAM	SINE/Alu	1	168	(8)	681876
18	0.0	3.9	0.0	chr11	73457747	73457772	(61628850)	+	(AAAAG)n	Simple_repeat	1	27	(0)	681877
263	17.3	0.0	0.0	chr11	73457773	73457824	(61628798)	+	L1MB4	LINE/L1	6126	6177	(3)	681874
467	27.5	6.8	1.4	chr11	73457857	73457996	(61628626)	+	MIRb	SINE/MIR	74	221	(47)	681878
407	28.2	11.3	4.2	chr11	74161673	74161813	(60924809)	+	L1ME4b	LINE/L1	228	382	(510)	683553
1989	16.2	1.3	0.0	chr11	74161814	74162115	(60924507)	C	AluJr	SINE/Alu	(6)	306	1	683554
407	23.7	31.2	5.5	chr11	74162116	74162415	(60924207)	+	L1ME4b	LINE/L1	383	758	(134)	683553
30	14.6	0.9	11.3	chr11	74311663	74311776	(60774846)	+	(CCGCC)n	Simple_repeat	1	115	(0)	683818
15	22.6	3.3	3.2	chr11	74493319	74493378	(60593244)	+	(GCACGC)n	Simple_repeat	1	62	(0)	684201
545	24.9	7.0	6.1	chr11	74493875	74494088	(60592534)	C	L2a	LINE/L2	(5)	3421	3206	684202
14	27.2	3.1	3.0	chr11	74748917	74748981	(60337641)	+	(GCG)n	Simple_repeat	1	67	(0)	684742
18	18.1	0.0	0.0	chr11	74749032	74749069	(60337553)	+	(CGC)n	Simple_repeat	1	38	(0)	684743
484	30.4	11.8	3.5	chr11	75125776	75126116	(59960506)	C	LTR79	LTR/ERVL	(127)	400	28	685366
188	25.5	10.5	0.0	chr11	75126314	75126364	(59960258)	C	OldhAT1	DNA/hAT-Ac	(2258)	590	534	685367
337	23.7	10.3	8.0	chr11	75635982	75636132	(59450490)	C	MER5A	DNA/hAT-Charlie	(0)	189	35	686478
18	19.6	1.7	5.1	chr11	75706476	75706533	(59380089)	+	(CCT)n	Simple_repeat	1	59	(0)	686604
336	33.5	14.8	0.0	chr11	75706665	75706831	(59379791)	+	MIRb	SINE/MIR	3	198	(70)	686605
441	23.0	4.0	0.4	chr11	76152167	76152293	(58934329)	C	MIRc	SINE/MIR	(121)	147	11	687418
181	22.2	15.9	0.0	chr11	76152476	76152565	(58934057)	C	L2c	LINE/L2	(316)	3071	2965	687419
10455	18.1	5.1	3.1	chr11	77252363	77254539	(57832083)	C	L1M2a	LINE/L1	(4943)	2623	401	689498
538	22.1	3.8	0.0	chr11	77471066	77471192	(57615430)	C	L2a	LINE/L2	(2)	3424	3293	689958
27	0.0	0.0	0.0	chr11	77471193	77471218	(57615404)	+	(GGGAT)n	Simple_repeat	1	26	(0)	689959
372	15.1	0.0	0.0	chr11	77471304	77471356	(57615266)	C	MER5A	DNA/hAT-Charlie	(0)	189	137	689960
213	25.7	5.4	2.8	chr11	77471794	77471865	(57614757)	+	L2b	LINE/L2	3301	3374	(1)	689961
472	19.7	4.9	0.0	chr11	77589146	77589262	(57497360)	+	L1MB4	LINE/L1	6052	6174	(6)	690201
13	12.6	8.6	0.0	chr11	77589618	77589652	(57496970)	+	(CCG)n	Simple_repeat	1	38	(0)	690202
16	24.7	3.8	0.0	chr11	77819417	77819469	(57267153)	+	(GCA)n	Simple_repeat	1	55	(0)	690657
15936	14.3	2.8	4.0	chr11	78624989	78625854	(56460768)	C	L1M1	LINE/L1	(1041)	6521	5659	692369
509	30.1	9.0	0.9	chr11	78645967	78646191	(56440431)	+	MIR	SINE/MIR	12	256	(6)	692389
332	28.1	8.2	5.6	chr11	79100075	79100217	(55986405)	+	MIRb	SINE/MIR	101	247	(21)	693262
452	28.1	0.9	1.7	chr11	79100544	79100659	(55985963)	+	L2a	LINE/L2	3310	3424	(2)	693263
1106	26.8	17.8	5.4	chr11	83241268	83241863	(51844759)	C	L2a	LINE/L2	(11)	3415	2764	700303
13	17.2	6.9	4.8	chr11	86068534	86068591	(49018031)	+	GA-rich	Low_complexity	1	62	(0)	704855
12	22.6	0.0	2.6	chr11	86068596	86068633	(49017989)	+	G-rich	Low_complexity	1	38	(0)	704856
16	10.8	0.0	3.1	chr11	86068852	86068883	(49017739)	+	(CCCCAC)n	Simple_repeat	1	32	(0)	704857
16	13.2	0.0	0.0	chr11	86245010	86245034	(48841588)	+	(CG)n	Simple_repeat	1	25	(0)	705223
15	26.8	3.3	1.6	chr11	86245077	86245136	(48841486)	+	(CGG)n	Simple_repeat	1	62	(0)	705224
972	26.3	9.7	3.6	chr11	87092718	87093211	(47993411)	C	L1MEd	LINE/L1	(5564)	1522	996	706629
1605	17.3	3.3	2.2	chr11	87093239	87093510	(47993112)	C	AluJb	SINE/Alu	(37)	275	1	706630
20	7.9	0.0	0.0	chr11	88337931	88337957	(46748665)	+	(T)n	Simple_repeat	1	27	(0)	708395
1387	22.9	2.1	2.1	chr11	88930134	88930421	(46156201)	+	AluJr	SINE/Alu	2	289	(23)	709275
1791	13.2	6.3	0.0	chr11	89727861	89728141	(45358481)	C	MER1B	DNA/hAT-Charlie	(0)	339	40	710527
24	20.3	2.0	0.0	chr11	93197514	93197564	(41889058)	+	(CA)n	Simple_repeat	1	52	(0)	715243
16	17.0	0.0	0.0	chr11	93197794	93197826	(41888796)	+	(CGC)n	Simple_repeat	1	33	(0)	715244
2222	5.4	0.8	0.4	chr11	93921511	93921792	(41164830)	C	AluSc8	SINE/Alu	(0)	311	30	716411
1318	20.6	23.3	1.7	chr11	93921793	93922353	(41164269)	+	LTR50	LTR/ERVL	32	759	(36)	716410
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
18300	3.7	0.3	0.1	chr11	94238529	94241278	(40845344)	C	L1PA4	LINE/L1	(372)	5782	3028	716863
18	7.6	0.0	0.0	chr11	94543836	94543863	(40542759)	+	(CTCC)n	Simple_repeat	1	28	(0)	717311
14	26.1	0.0	0.0	chr11	95231044	95231084	(39855538)	+	(GCG)n	Simple_repeat	1	41	(0)	718308
421	28.4	5.8	3.8	chr11	95878897	95879094	(39207528)	C	MIRb	SINE/MIR	(36)	232	28	719270
255	35.0	6.3	3.9	chr11	95879357	95879588	(39207034)	+	L2	LINE/L2	2544	2781	(638)	719271
19	12.2	2.7	0.0	chr11	96389853	96389889	(38696733)	+	(CGCCTC)n	Simple_repeat	1	38	(0)	720073
9377	12.5	4.6	3.8	chr11	97463176	97464742	(37621880)	+	THE1C-int	LTR/ERVL-MaLR	2	1580	(0)	721253
14	20.9	4.3	2.0	chr11	102110476	102110522	(32976100)	+	GA-rich	Low_complexity	1	49	(0)	727405
18	21.2	4.8	1.5	chr11	102110645	102110706	(32975916)	+	(GGAGGC)n	Simple_repeat	1	65	(0)	727406
276	35.3	12.2	3.3	chr11	102542819	102543237	(32543385)	+	L2c	LINE/L2	2877	3351	(36)	728111
2135	16.1	0.0	0.0	chr11	102543287	102543597	(32543025)	C	AluJo	SINE/Alu	(1)	311	1	728112
373	29.7	11.2	6.3	chr11	102543604	102543890	(32542732)	+	MLT1K	LTR/ERVL-MaLR	293	595	(0)	728113
1766	17.8	0.9	3.1	chr11	102617924	102618276	(32468346)	C	MER2	DNA/TcMar-Tigger	(0)	345	1	728230
21136	10.7	0.8	3.0	chr11	102817726	102820373	(32266249)	C	L1PA7	LINE/L1	(3831)	2630	8	728509
14	17.9	0.0	4.8	chr11	103109529	103109570	(31977052)	+	(CTTCCCC)n	Simple_repeat	1	42	(0)	729012
237	27.4	3.1	0.0	chr11	103673558	103673619	(31413003)	C	MamRep605	LTR?	(419)	430	367	729789
1726	23.6	4.3	0.5	chr11	103673762	103674144	(31412478)	C	MER119	DNA/hAT-Charlie	(182)	401	4	729790
3656	25.0	7.0	2.7	chr11	105605432	105605937	(29480685)	+	L1MC3	LINE/L1	6447	6979	(806)	732436
2580	9.3	9.2	0.0	chr11	105605938	105606333	(29480289)	+	L1PA13	LINE/L1	5723	6158	(5)	732437
2270	9.8	1.9	0.0	chr11	107286674	107286978	(27799644)	+	AluSc8	SINE/Alu	1	311	(0)	734684
1261	19.0	0.5	2.3	chr11	107287087	107287307	(27799315)	C	AluJb	SINE/Alu	(9)	303	87	734685
2346	6.5	4.6	0.7	chr11	107379779	107380072	(27706550)	+	AluY	SINE/Alu	2	307	(4)	734810
429	24.7	6.1	6.1	chr11	107900818	107900991	(27185631)	+	HAL1	LINE/L1	880	1058	(1449)	735795
1610	19.0	1.3	1.9	chr11	107900992	107901302	(27185320)	+	AluJr	SINE/Alu	1	309	(3)	735796
429	24.7	6.1	6.1	chr11	107901303	107901438	(27185184)	+	HAL1	LINE/L1	1059	1190	(1317)	735795
363	13.5	22.9	5.6	chr11	108008530	108008618	(27078004)	C	FLAM_C	SINE/Alu	(3)	140	32	736035
192	31.4	0.0	0.0	chr11	108008683	108008733	(27077889)	C	L2c	LINE/L2	(7)	3380	3330	736036
17	14.4	0.0	4.8	chr11	110092915	110092956	(24993666)	+	(GCGG)n	Simple_repeat	1	42	(0)	739265
13	15.8	0.0	7.3	chr11	110093511	110093551	(24993071)	+	G-rich	Low_complexity	1	41	(0)	739266
1011	24.9	5.5	3.3	chr11	110362826	110363161	(24723461)	C	HAL1ME	LINE/L1	(1446)	1019	676	739713
1412	23.9	11.1	3.0	chr11	110363259	110363729	(24722893)	C	HAL1ME	LINE/L1	(1940)	525	12	739713
13	27.9	2.9	2.9	chr11	110429986	110430053	(24656569)	+	(CCGCCG)n	Simple_repeat	1	70	(0)	739820
32	27.5	0.8	4.0	chr11	113314454	113314577	(21772045)	+	(CCCGGC)n	Simple_repeat	1	125	(0)	744365
360	27.8	0.9	12.9	chr11	113530917	113531048	(21555574)	+	L2b	LINE/L2	3263	3387	(0)	744710
260	33.8	4.9	1.4	chr11	113531192	113531329	(21555293)	+	MIRb	SINE/MIR	77	219	(49)	744711
617	22.5	1.2	3.6	chr11	113531488	113531653	(21554969)	C	MER5A1	DNA/hAT-Charlie	(3)	163	2	744712
302	31.1	5.5	1.0	chr11	114478842	114478945	(20607677)	C	L2b	LINE/L2	(38)	3337	3229	746344
1882	25.0	7.7	4.0	chr11	114540626	114540837	(20545785)	+	L1MC3	LINE/L1	113	342	(5794)	746411
53	0.0	0.0	0.0	chr11	114540838	114540885	(20545737)	+	(T)n	Simple_repeat	1	48	(0)	746412
1882	25.0	7.7	4.0	chr11	114540886	114541430	(20545192)	+	L1MC3	LINE/L1	343	901	(5235)	746411
17	0.0	0.0	0.0	chr11	115242337	115242355	(19844267)	+	(A)n	Simple_repeat	1	19	(0)	747383
181	33.7	6.5	6.5	chr11	115653807	115653914	(19432708)	+	MIRc	SINE/MIR	11	118	(150)	748014
216	20.4	0.0	0.0	chr11	115653929	115653972	(19432650)	+	MIRc	SINE/MIR	207	250	(18)	748015
291	29.0	8.4	5.1	chr11	116175879	116176051	(18910571)	C	L2c	LINE/L2	(1)	3386	3181	748813
12	13.6	2.8	5.4	chr11	117179036	117179071	(17907551)	+	(CCCT)n	Simple_repeat	1	37	(0)	750694
19	25.5	3.5	3.4	chr11	118611289	118611373	(16475249)	+	(TCTCT)n	Simple_repeat	1	88	(0)	753237
336	24.1	0.0	2.6	chr11	118611458	118611563	(16475059)	C	MIR3	SINE/MIR	(85)	183	81	753238
291	29.0	7.2	1.9	chr11	118660186	118660343	(16426279)	+	MER115	DNA/hAT-Tip100	246	412	(281)	753301
966	9.2	0.0	3.8	chr11	118668213	118668371	(16418251)	+	L1M1	LINE/L1	3605	3757	(2389)	753312
1265	12.4	5.2	3.4	chr11	118668381	118668589	(16418033)	+	AluJb	SINE/Alu	98	310	(2)	753313
294	4.2	0.0	12.7	chr11	118668591	118668645	(16417977)	+	L1M1	LINE/L1	4511	4558	(1588)	753312
13	16.0	0.0	3.2	chr11	119364270	119364300	(15722322)	+	(GCCCC)n	Simple_repeat	1	31	(0)	754747
369	31.4	7.7	9.7	chr11	119556283	119556688	(15529934)	C	L2a	LINE/L2	(6)	3420	3014	755071
4222	12.4	0.5	3.7	chr11	119556689	119557343	(15529279)	+	MER51A	LTR/ERV1	1	634	(0)	755072
10139	17.6	2.3	2.1	chr11	120766920	120769378	(14317244)	C	L1MA9	LINE/L1	(527)	5785	3313	757105
1548	15.4	0.0	0.9	chr11	125658055	125658287	(9428335)	C	AluJb	SINE/Alu	(0)	312	82	764918
548	30.1	9.0	2.0	chr11	126480369	126480565	(8606057)	C	MIR	SINE/MIR	(31)	237	21	766151
656	22.8	12.4	1.6	chr11	126481020	126481206	(8605416)	C	L2a	LINE/L2	(15)	3411	3202	766152
250	28.4	1.5	0.0	chr11	128616700	128616766	(6469856)	C	MIRc	SINE/MIR	(128)	140	73	769152
14	17.5	0.0	0.0	chr11	128891282	128891313	(6195309)	+	(CCCCG)n	Simple_repeat	1	32	(0)	769533
2354	24.3	14.1	1.8	chr11	129384980	129385823	(5700799)	+	L1ME3Cz	LINE/L1	55	988	(9)	770250
15	19.9	0.0	0.0	chr12	751084	751112	(132524197)	+	A-rich	Low_complexity	1	29	(0)	779402
6726	19.2	1.3	9.7	chr12	1057964	1058789	(132216520)	C	L1P4	LINE/L1	(958)	5342	4534	780018
2450	22.8	11.3	3.9	chr12	1478800	1479486	(131795823)	C	L1ME2z	LINE/L1	(972)	5174	4432	780732
832	26.8	10.2	3.0	chr12	1700922	1701127	(131574182)	C	L1ME3Cz	LINE/L1	(12)	985	756	781124
1842	16.7	3.3	0.7	chr12	1701128	1701421	(131573888)	C	AluJo	SINE/Alu	(10)	302	1	781125
832	26.8	10.2	3.0	chr12	1701422	1701549	(131573760)	C	L1ME3Cz	LINE/L1	(242)	755	624	781124
756	27.1	3.8	0.4	chr12	3587522	3587751	(129687558)	C	L1ME3F	LINE/L1	(108)	6135	5898	784069
23	14.5	0.0	0.0	chr12	6778615	6778652	(126496657)	+	(TC)n	Simple_repeat	1	38	(0)	789364
17	24.3	1.9	0.0	chr12	6778866	6778910	(126496399)	+	(CGCGCA)n	Simple_repeat	1	45	(0)	789365
31	3.3	0.0	0.0	chr12	6778911	6778941	(126496368)	+	(CA)n	Simple_repeat	1	31	(0)	789366
17	24.3	1.9	0.0	chr12	6778942	6778953	(126496356)	+	(CGCGCA)n	Simple_repeat	5	17	(0)	789367
1689	6.5	0.0	2.8	chr12	6908630	6908843	(126366466)	+	AluY	SINE/Alu	94	301	(10)	789629
808	14.4	7.7	6.2	chr12	6908845	6909022	(126366287)	C	MER21A	LTR/ERVL	(727)	204	24	789627
228	2.3	13.3	0.7	chr12	6909024	6909511	(126365798)	+	(AT)n	Simple_repeat	1	553	(0)	789630
1822	13.7	8.9	4.4	chr12	6944852	6945194	(126330115)	C	Tigger4b	DNA/TcMar-Tigger	(1)	360	1	789679
2681	3.9	0.0	0.7	chr12	8027396	8027704	(125247605)	+	AluY	SINE/Alu	2	308	(3)	791654
428	34.0	2.5	0.6	chr12	8485087	8485246	(124790063)	C	L2a	LINE/L2	(454)	2965	2803	792340
15	19.7	0.0	0.0	chr12	8485322	8485350	(124789959)	+	(T)n	Simple_repeat	1	29	(0)	792342
1889	15.8	0.3	0.3	chr12	8529343	8529627	(124745682)	+	AluJr	SINE/Alu	11	295	(17)	792395
1009	28.4	8.6	5.0	chr12	8529628	8530047	(124745262)	+	HAL1	LINE/L1	2040	2488	(19)	792394
7845	6.6	0.4	0.8	chr12	8537686	8538696	(124736613)	+	LTR13	LTR/ERVK	1	1007	(0)	792408
3591	17.1	4.0	6.5	chr12	9592196	9593040	(123682269)	C	L1MA9	LINE/L1	(22)	6290	5468	794070
1095	17.0	9.1	2.0	chr12	9647683	9647736	(123627573)	C	L1MC2	LINE/L1	(269)	6075	6015	794128
9218	19.6	7.0	3.5	chr12	10152997	10154367	(123120942)	C	L1PA16	LINE/L1	(4897)	2038	582	794805
804	25.4	3.1	6.1	chr12	10395609	10395872	(122879437)	+	LTR41C	LTR/ERVL	1	256	(445)	795189
9521	16.7	1.2	0.4	chr12	10855285	10856901	(122418408)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	795765
265	29.5	9.5	0.0	chr12	11170964	11171058	(122104251)	+	MIRb	SINE/MIR	46	150	(118)	796143
15576	18.7	3.3	2.3	chr12	15062007	15066234	(118209075)	C	L1MA4A	LINE/L1	(1952)	5610	1285	802291
1036	14.9	0.6	1.2	chr12	15881803	15881963	(117393346)	C	AluJb	SINE/Alu	(14)	298	139	803442
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
237	37.0	2.8	1.4	chr12	17097913	17098052	(116177257)	C	MLT1J-int	LTR/ERVL-MaLR	(876)	511	370	805100
21199	10.6	1.3	1.0	chr12	18890261	18896672	(114378637)	C	L1PA8A	LINE/L1	(1)	6445	4	807220
22	7.4	0.0	0.0	chr12	20369183	20369211	(112906098)	+	(GT)n	Simple_repeat	1	29	(0)	809556
20	22.9	0.0	0.0	chr12	20369212	20369228	(112906081)	+	(GCGT)n	Simple_repeat	3	48	(0)	809557
14	16.1	0.0	0.0	chr12	20369562	20369589	(112905720)	+	GA-rich	Low_complexity	1	28	(0)	809558
14	17.4	2.3	4.5	chr12	24563185	24563227	(108712082)	+	(GGCG)n	Simple_repeat	1	44	(0)	815081
12	23.9	0.0	2.4	chr12	24563250	24563290	(108712019)	+	(GCGAGCC)n	Simple_repeat	1	41	(0)	815082
57	1.9	0.0	0.0	chr12	24563496	24563548	(108711761)	+	(CA)n	Simple_repeat	1	53	(0)	815083
2149	11.2	3.0	0.0	chr12	24801664	24801950	(108473359)	C	AluSc8	SINE/Alu	(15)	296	1	815442
1672	15.8	2.0	4.0	chr12	25583327	25583464	(107691845)	C	AluJo	SINE/Alu	(179)	133	1	816696
1523	24.4	8.0	5.1	chr12	25583659	25584188	(107691121)	C	L2	LINE/L2	(354)	3065	2519	816698
16	11.2	7.1	4.4	chr12	26126103	26126144	(107149165)	+	(CG)n	Simple_repeat	1	45	(0)	817541
1738	18.1	3.6	11.5	chr12	26273280	26273697	(107001612)	C	MLT1B	LTR/ERVL-MaLR	(3)	387	4	817739
15	8.1	0.0	3.6	chr12	26832520	26832547	(106442762)	+	(GCGA)n	Simple_repeat	1	28	(0)	818543
189	20.8	4.0	0.0	chr12	26832755	26832802	(106442507)	+	Tigger19b	DNA/TcMar-Tigger	320	369	(181)	818544
286	28.3	4.5	1.9	chr12	29729226	29729333	(103545976)	+	L2c	LINE/L2	3228	3338	(49)	822776
232	23.4	0.0	4.5	chr12	29729669	29729735	(103545574)	+	LTR33	LTR/ERVL	431	494	(21)	822777
498	26.9	0.8	0.8	chr12	29729758	29729877	(103545432)	C	L2a	LINE/L2	(1)	3425	3306	822778
1294	12.8	0.0	0.0	chr12	31604008	31604179	(101671130)	C	AluSx1	SINE/Alu	(1)	311	140	825608
1454	22.3	6.2	0.0	chr12	31604203	31604371	(101670938)	C	AluJb	SINE/Alu	(6)	306	134	825609
32	2.9	0.0	0.0	chr12	31604372	31604406	(101670903)	+	(TGTT)n	Simple_repeat	1	35	(0)	825610
1454	22.3	6.2	0.0	chr12	31604407	31604523	(101670786)	C	AluJb	SINE/Alu	(195)	117	1	825609
13	11.2	3.2	3.1	chr12	32679264	32679294	(100596015)	+	GA-rich	Low_complexity	1	32	(0)	827925
16	23.9	0.0	0.0	chr12	32679526	32679569	(100595740)	+	(GCGCCC)n	Simple_repeat	1	44	(0)	827926
2545	18.0	7.0	0.0	chr12	33543314	33543835	(99731474)	+	L1MB2	LINE/L1	5611	6171	(0)	829153
1128	19.5	13.6	5.8	chr12	38416339	38416615	(94858694)	+	MER47A	DNA/TcMar-Tigger	65	366	(0)	831078
1734	16.0	3.4	2.4	chr12	38416636	38416929	(94858380)	C	AluJr	SINE/Alu	(15)	297	1	831079
16	0.0	0.0	0.0	chr12	38557454	38557470	(94717839)	+	(T)n	Simple_repeat	1	17	(0)	831268
471	29.9	12.3	0.6	chr12	38557484	38557648	(94717661)	+	MIRb	SINE/MIR	36	222	(46)	831269
19	11.3	2.6	0.0	chr12	39442876	39442913	(93832396)	+	(CCGCCGC)n	Simple_repeat	1	39	(0)	832451
19	27.2	1.2	3.7	chr12	39443387	39443466	(93831843)	+	(CCCCG)n	Simple_repeat	1	81	(0)	832452
16	9.2	7.7	5.4	chr12	40105598	40105651	(93169658)	+	(CGCCG)n	Simple_repeat	1	55	(0)	833296
2892	20.9	9.2	2.1	chr12	40860355	40861032	(92414277)	C	MER21C	LTR/ERVL	(85)	853	123	834279
34	0.0	0.0	0.0	chr12	42484012	42484048	(90791261)	+	(A)n	Simple_repeat	1	37	(0)	836701
499	26.2	2.7	8.6	chr12	44421028	44421261	(88854048)	+	LTR82B	LTR/ERVL	139	358	(472)	839420
398	29.3	2.6	2.0	chr12	44421491	44421643	(88853666)	+	LTR82B	LTR/ERVL	670	823	(7)	839420
10989	14.2	4.0	2.5	chr12	44964242	44967365	(88307944)	+	L1MA1	LINE/L1	2963	6138	(164)	840120
13	18.9	0.0	0.0	chr12	45216357	45216386	(88058923)	+	GA-rich	Low_complexity	1	30	(0)	840513
13	0.0	5.0	0.0	chr12	45727547	45727566	(87547743)	+	(GGC)n	Simple_repeat	1	21	(0)	841277
15	29.2	2.9	1.4	chr12	45729041	45729108	(87546201)	+	(GGCA)n	Simple_repeat	1	70	(0)	841278
17	17.1	5.4	3.4	chr12	45729238	45729306	(87546003)	+	(CCG)n	Simple_repeat	1	70	(0)	841279
1571	10.8	0.5	0.0	chr12	45771161	45771373	(87503936)	+	AluSz	SINE/Alu	86	299	(13)	841354
1690	19.8	0.0	2.7	chr12	45771383	45771675	(87503634)	+	AluJr	SINE/Alu	1	285	(27)	841355
6173	18.9	9.1	4.4	chr12	45771677	45772309	(87503000)	+	L1M4b	LINE/L1	2463	3154	(3713)	841351
17	13.2	5.5	5.2	chr12	45990597	45990651	(87284658)	+	(CCTC)n	Simple_repeat	1	58	(0)	841694
13	13.1	0.0	0.0	chr12	47963539	47963563	(85311746)	+	(GCGC)n	Simple_repeat	1	25	(0)	844505
22	21.4	1.3	6.2	chr12	49367401	49367479	(83907830)	+	(GGC)n	Simple_repeat	1	80	(0)	847046
1703	11.7	7.4	5.9	chr12	50763351	50763657	(82511652)	+	AluJo	SINE/Alu	1	312	(0)	849955
23	8.8	0.0	0.0	chr12	50764042	50764077	(82511232)	+	(GCCCCC)n	Simple_repeat	1	36	(0)	849956
2353	10.3	0.0	1.9	chr12	51157010	51157321	(82117988)	C	AluSq2	SINE/Alu	(7)	306	1	850723
1217	22.1	9.6	0.8	chr12	51157327	51157593	(82117716)	C	AluJo	SINE/Alu	(19)	293	1	850724
238	24.8	0.0	17.2	chr12	51157594	51157676	(82117633)	C	L1MB3	LINE/L1	(2810)	3566	3495	850716
1833	15.1	1.0	2.3	chr12	52139142	52139446	(81135863)	C	AluSz	SINE/Alu	(11)	301	1	852501
1964	12.2	2.7	0.7	chr12	53046210	53046495	(80228814)	+	AluJb	SINE/Alu	1	292	(20)	853985
20	17.8	5.9	5.6	chr12	53047081	53047165	(80228144)	+	GA-rich	Low_complexity	1	90	(0)	853986
2253	9.1	1.7	1.0	chr12	54328290	54328586	(78946723)	+	AluSg	SINE/Alu	1	299	(11)	856275
12	26.9	1.6	4.7	chr12	54418907	54418969	(78856340)	+	(CCAGCC)n	Simple_repeat	1	64	(0)	856407
20	13.0	0.0	0.0	chr12	54419093	54419127	(78856182)	+	(GCA)n	Simple_repeat	1	35	(0)	856408
17	29.1	0.0	1.7	chr12	54419128	54419146	(78856163)	+	(GGCGGC)n	Simple_repeat	5	58	(0)	856409
20	17.4	0.0	2.1	chr12	57430479	57430525	(75844784)	+	(CCGCCCC)n	Simple_repeat	1	47	(0)	861299
17	28.0	1.5	1.5	chr12	57430640	57430705	(75844604)	+	(CGCC)n	Simple_repeat	1	67	(0)	861300
15	24.6	0.0	0.0	chr12	57431143	57431185	(75844124)	+	(CGCACG)n	Simple_repeat	1	43	(0)	861303
12	31.2	0.0	0.0	chr12	57431186	57431196	(75844113)	+	(CGCA)n	Simple_repeat	1	54	(0)	861304
440	20.9	2.6	3.5	chr12	57865070	57865183	(75410126)	C	L2a	LINE/L2	(2)	3424	3312	861950
1195	20.2	19.6	7.7	chr12	59491189	59491628	(73783681)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	864168
6252	13.5	8.4	3.8	chr12	65228703	65230982	(68044327)	C	L1MA5	LINE/L1	(2)	6298	3906	872486
755	16.0	2.7	2.0	chr12	66736022	66736168	(66539141)	C	Tigger2a	DNA/TcMar-Tigger	(0)	434	290	874814
1115	16.5	6.4	6.4	chr12	66736174	66736346	(66538963)	C	AluJr4	SINE/Alu	(20)	292	134	874815
51	0.0	0.0	0.0	chr12	66736347	66736392	(66538917)	+	(T)n	Simple_repeat	1	46	(0)	874816
11218	11.4	1.8	0.3	chr12	68083164	68084768	(65190541)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	3	876841
36143	6.3	1.9	0.8	chr12	68540690	68547511	(64727798)	+	Harlequin-int	LTR/ERV1	1	6895	(1)	877578
474	30.3	6.4	8.1	chr12	69062973	69063306	(64212003)	+	LTR84a	LTR/ERVL	430	757	(0)	878604
1826	17.1	0.3	1.3	chr12	69491099	69491396	(63783913)	C	AluJb	SINE/Alu	(17)	295	1	879392
283	18.1	12.6	1.2	chr12	69491407	69491490	(63783819)	C	L1ME4c	LINE/L1	(261)	569	475	879393
1377	16.2	8.9	4.0	chr12	69491506	69491782	(63783527)	C	AluJr4	SINE/Alu	(5)	307	16	879394
2053	13.2	0.7	0.0	chr12	69536102	69536422	(63738887)	C	AluSx	SINE/Alu	(0)	312	1	879467
2053	25.4	8.2	9.1	chr12	69536423	69536565	(63738744)	C	L1MEd	LINE/L1	(3866)	2280	2108	879466
19	6.1	5.7	0.0	chr12	69738825	69738859	(63536450)	+	(GCTCCCG)n	Simple_repeat	1	37	(0)	879832
18	18.5	8.2	0.0	chr12	69738860	69738884	(63536425)	+	(CGCTCCCG)n	Simple_repeat	2	66	(0)	879833
13	16.9	4.8	2.3	chr12	69739409	69739450	(63535859)	+	(GCGGC)n	Simple_repeat	1	44	(0)	879834
13	12.8	2.6	5.1	chr12	70242939	70242976	(63032333)	+	(GGAGTGA)n	Simple_repeat	1	39	(0)	880614
27	6.1	0.0	0.0	chr12	70242991	70243025	(63032284)	+	(AACACA)n	Simple_repeat	1	35	(0)	880615
1084	26.1	11.4	1.6	chr12	70270992	70271368	(63003941)	C	MLT1L	LTR/ERVL-MaLR	(49)	561	143	880654
2232	11.6	2.6	0.0	chr12	70271371	70271672	(63003637)	C	AluSq	SINE/Alu	(3)	310	1	880655
19	8.3	0.0	0.0	chr12	70394592	70394617	(62880692)	+	(TG)n	Simple_repeat	1	26	(0)	880832
1786	20.2	0.0	0.0	chr12	70394664	70394965	(62880344)	C	AluJb	SINE/Alu	(9)	303	2	880833
2008	24.8	6.8	1.6	chr12	71029214	71029730	(62245579)	+	MLT1F	LTR/ERVL-MaLR	1	546	(2)	881764
2270	11.6	1.0	0.0	chr12	71480082	71480384	(61794925)	+	AluSz6	SINE/Alu	1	306	(6)	882360
16	7.0	6.7	0.0	chr12	71504120	71504149	(61771160)	+	(TTG)n	Simple_repeat	1	32	(0)	882399
1182	16.9	15.6	2.3	chr12	71730272	71730517	(61544792)	+	AluJr	SINE/Alu	1	289	(23)	882758
31	0.0	2.7	2.6	chr12	71755136	71755172	(61520137)	+	(GCG)n	Simple_repeat	1	38	(0)	882813
749	20.7	14.2	10.7	chr12	75391553	75391953	(57883356)	C	MER96B	DNA/hAT-Tip100	(0)	417	1	887475
12	13.9	0.0	0.0	chr12	76084480	76084503	(57190806)	+	(TCCC)n	Simple_repeat	1	24	(0)	888580
17	16.9	2.0	3.9	chr12	76084621	76084670	(57190639)	+	(GCGGCA)n	Simple_repeat	1	51	(0)	888581
2601	6.0	0.3	0.6	chr12	76763244	76763557	(56511752)	+	AluSq2	SINE/Alu	1	313	(0)	889812
13	16.2	5.4	6.8	chr12	76764091	76764146	(56511163)	+	GA-rich	Low_complexity	1	59	(0)	889813
17	14.2	8.9	1.6	chr12	76764146	76764201	(56511108)	+	(GCTCGC)n	Simple_repeat	1	61	(0)	889814
16	17.2	7.4	1.7	chr12	77065820	77065843	(56209466)	+	(CGG)n	Simple_repeat	1	57	(0)	890306
16	11.3	0.0	0.0	chr12	77065844	77065872	(56209437)	+	(GGCGC)n	Simple_repeat	1	29	(0)	890307
14	9.6	0.0	0.0	chr12	77065873	77065895	(56209414)	+	(GGA)n	Simple_repeat	1	23	(0)	890308
13	11.7	3.6	0.0	chr12	77066215	77066242	(56209067)	+	(TTTG)n	Simple_repeat	1	29	(0)	890309
1643	19.0	3.5	1.3	chr12	79680835	79681126	(53594183)	+	AluJb	SINE/Alu	1	299	(13)	893866
39	2.5	0.0	0.0	chr12	79681127	79681167	(53594142)	+	(GGGAG)n	Simple_repeat	1	41	(0)	893867
1643	19.0	3.5	1.3	chr12	79681168	79681180	(53594129)	+	AluJb	SINE/Alu	300	312	(0)	893866
793	17.1	5.8	0.7	chr12	79681313	79681458	(53593851)	+	AluJo	SINE/Alu	136	289	(23)	893868
17	12.3	0.0	5.1	chr12	79689686	79689724	(53585585)	+	(GCCCG)n	Simple_repeat	1	39	(0)	893881
12	15.3	5.3	2.5	chr12	79934885	79934922	(53340387)	+	(CGCTTC)n	Simple_repeat	1	40	(0)	894281
561	28.6	13.5	0.9	chr12	82359291	82359625	(50915684)	C	L2	LINE/L2	(357)	3062	2679	897654
32	0.0	0.0	0.0	chr12	82686970	82686999	(50588310)	+	(GCTGGG)n	Simple_repeat	1	30	(0)	898090
6701	29.8	5.6	4.6	chr12	84502401	84508601	(48766708)	C	MER50-int	LTR/ERV1	(1870)	5886	97	900364
13	27.1	3.2	3.1	chr12	84508602	84508664	(48766645)	+	A-rich	Low_complexity	1	65	(0)	900365
411	25.0	4.0	0.8	chr12	84508671	84508791	(48766518)	C	MER50-int	LTR/ERV1	(7080)	125	1	900364
4169	18.0	1.7	4.5	chr12	84508794	84509596	(48765713)	C	MER50C	LTR/ERV1	(2)	780	1	900364
22	33.4	0.0	0.0	chr12	84912766	84912840	(48362469)	+	(GT)n	Simple_repeat	1	75	(0)	900920
15	15.2	2.0	7.7	chr12	85280157	85280207	(47995102)	+	(TCCC)n	Simple_repeat	1	52	(0)	901404
15	29.4	1.6	1.5	chr12	85280565	85280628	(47994681)	+	(GGAAGGT)n	Simple_repeat	1	65	(0)	901405
19	11.4	2.6	0.0	chr12	85280930	85280967	(47994342)	+	(AAACAAA)n	Simple_repeat	1	39	(0)	901406
43	0.0	0.0	0.0	chr12	88648807	88648845	(44626464)	+	(TTTA)n	Simple_repeat	1	39	(0)	905798
426	18.2	0.0	0.0	chr12	88648851	88648916	(44626393)	C	AluJo	SINE/Alu	(30)	282	217	905799
20	13.9	0.0	0.0	chr12	88648925	88648956	(44626353)	+	(A)n	Simple_repeat	1	32	(0)	905800
1918	17.1	0.4	0.0	chr12	88648957	88649236	(44626073)	C	AluJb	SINE/Alu	(31)	281	1	905801
462	31.0	6.2	4.8	chr12	88755320	88755526	(44519783)	C	L2c	LINE/L2	(68)	3319	3110	905948
15	24.7	0.0	2.2	chr12	89352704	89352748	(43922561)	+	GA-rich	Low_complexity	1	45	(0)	906881
581	28.1	3.8	0.6	chr12	91621290	91621468	(41653841)	+	MIR	SINE/MIR	1	185	(77)	910197
14	20.4	3.7	3.6	chr12	92146392	92146445	(41128864)	+	(GTGCG)n	Simple_repeat	1	56	(0)	911016
8213	20.9	10.6	2.8	chr12	94447517	94449474	(38825835)	+	L1ME1	LINE/L1	2894	4651	(2355)	915209
1914	14.5	0.3	6.3	chr12	94449475	94449806	(38825503)	+	AluJo	SINE/Alu	1	312	(0)	915211
8213	21.6	11.2	2.8	chr12	94449807	94450261	(38825048)	+	L1ME1	LINE/L1	4652	5156	(1850)	915209
13	0.0	0.0	0.0	chr12	94459808	94459824	(38815485)	+	(GGC)n	Simple_repeat	1	17	(0)	915224
12	19.3	8.5	0.0	chr12	94460065	94460111	(38815198)	+	(GCGGCA)n	Simple_repeat	1	51	(0)	915225
1313	11.5	3.9	1.0	chr12	95963238	95963439	(37311870)	+	MER20	DNA/hAT-Charlie	1	208	(11)	918196
28	11.5	1.6	4.8	chr12	96400596	96400657	(36874652)	+	G-rich	Low_complexity	1	63	(0)	918978
1825	18.1	1.3	1.0	chr12	100062680	100062989	(33212320)	+	AluJr	SINE/Alu	1	311	(1)	924793
1012	17.7	0.0	4.7	chr12	100063060	100063249	(33212060)	+	L1PBa	LINE/L1	259	439	(6423)	924794
8265	13.6	4.4	0.9	chr12	100063247	100063424	(33211885)	+	L1PBa	LINE/L1	1392	1564	(5299)	924794
2208	11.0	0.3	1.0	chr12	101928345	101928645	(31346664)	C	AluSc	SINE/Alu	(9)	300	2	928277
23	3.5	3.3	0.0	chr12	101928829	101928858	(31346451)	+	(AG)n	Simple_repeat	1	31	(0)	928278
314	30.3	3.3	10.3	chr12	103392900	103393105	(29882204)	+	MLT1N2	LTR/ERVL-MaLR	332	529	(33)	930607
2053	14.9	7.8	3.5	chr12	103393106	103393509	(29881800)	C	MSTB	LTR/ERVL-MaLR	(0)	426	4	930608
3154	17.8	5.4	8.0	chr12	103838504	103839248	(29436061)	+	L1MD2	LINE/L1	5569	6294	(65)	931383
1603	17.5	3.4	1.0	chr12	103839249	103839539	(29435770)	C	AluJb	SINE/Alu	(14)	298	1	931384
226	26.5	0.0	1.4	chr12	104081671	104081739	(29193570)	C	Charlie15b	DNA/hAT-Charlie	(13)	1048	981	931837
1089	18.9	0.0	0.0	chr12	104081757	104081925	(29193384)	+	AluJb	SINE/Alu	135	303	(9)	931838
279	29.9	10.6	3.8	chr12	104081938	104082069	(29193240)	C	Charlie15a	DNA/hAT-Charlie	(74)	150	9	931839
189	16.1	0.0	0.0	chr12	104456707	104456737	(28818572)	C	MER131	DNA?	(150)	65	35	932617
16	20.7	2.2	2.1	chr12	104457113	104457158	(28818151)	+	(GGC)n	Simple_repeat	1	47	(0)	932618
18	15.3	0.0	2.6	chr12	104457138	104457175	(28818134)	+	GA-rich	Low_complexity	1	38	(0)	932619
13	20.4	4.3	2.0	chr12	104457323	104457369	(28817940)	+	G-rich	Low_complexity	1	49	(0)	932620
1936	17.4	3.9	12.3	chr12	104557000	104557188	(28718121)	C	MLT1C	LTR/ERVL-MaLR	(291)	176	1	932828
259	34.3	3.6	0.0	chr12	104557338	104557445	(28717864)	C	L2c	LINE/L2	(491)	2928	2817	932819
57	19.2	4.9	2.4	chr12	105100315	105100476	(28174833)	+	(CTTC)n	Simple_repeat	1	170	(0)	933840
1942	18.3	1.0	0.7	chr12	105100478	105100783	(28174526)	C	AluJr	SINE/Alu	(4)	308	2	933841
12	16.6	4.5	4.3	chr12	105107671	105107714	(28167595)	+	(GAGCCG)n	Simple_repeat	1	46	(0)	933857
2601	18.9	6.9	5.7	chr12	105342548	105342846	(27932463)	C	MER21C	LTR/ERVL	(550)	388	3	934197
14	18.8	5.0	4.8	chr12	107760887	107760946	(25514363)	+	(GCCGCG)n	Simple_repeat	1	63	(0)	938825
1573	17.5	3.0	5.4	chr12	109682779	109683092	(23592217)	C	AluJb	SINE/Alu	(6)	306	1	943061
341	34.5	2.5	3.7	chr12	109683093	109683191	(23592118)	+	MER103C	DNA/hAT-Charlie	151	243	(54)	943060
212	41.5	1.9	0.0	chr12	109683237	109683342	(23591967)	+	L2c	LINE/L2	3279	3386	(1)	943062
37	20.0	1.2	0.0	chr12	114684052	114684132	(18591177)	+	GA-rich	Low_complexity	1	82	(0)	954267
13	15.7	8.1	4.5	chr12	114684550	114684611	(18590698)	+	(GAGGCAG)n	Simple_repeat	1	67	(0)	954268
5006	14.6	1.9	3.0	chr12	114930691	114931557	(18343752)	C	L1M3	LINE/L1	(839)	5301	4444	954909
4753	25.6	8.8	3.8	chr12	116244302	116244669	(17030640)	+	HAL1	LINE/L1	2	373	(2134)	957579
1851	18.6	0.0	1.0	chr12	116244670	116244981	(17030328)	+	AluJb	SINE/Alu	2	310	(2)	957580
4753	25.6	8.8	3.8	chr12	116244982	116246530	(17028779)	+	HAL1	LINE/L1	374	2024	(483)	957579
2144	11.7	2.0	0.7	chr12	116261214	116261511	(17013798)	+	AluSq	SINE/Alu	1	302	(11)	957602
2270	10.7	1.6	0.7	chr12	116406221	116406529	(16868780)	C	AluSx1	SINE/Alu	(0)	312	1	957955
522	30.7	10.8	1.6	chr12	116455226	116455543	(16819766)	+	L2a	LINE/L2	3075	3425	(1)	958097
18	19.7	0.0	3.9	chr12	116455985	116456035	(16819274)	+	(TTCTTT)n	Simple_repeat	1	51	(0)	958098
15	32.4	1.1	3.3	chr12	116819327	116819415	(16455894)	+	(GGCCCGG)n	Simple_repeat	1	90	(0)	959020
1738	17.6	2.0	1.0	chr12	117383625	117383926	(15891383)	C	AluJb	SINE/Alu	(1)	311	7	960218
14	25.6	1.7	3.3	chr12	118104038	118104096	(15171213)	+	(GCCGG)n	Simple_repeat	1	60	(0)	961850
2223	9.1	1.3	0.3	chr12	120291111	120291406	(12983903)	+	AluSq	SINE/Alu	8	306	(7)	966630
727	14.8	19.6	0.0	chr12	120466230	120466364	(12808945)	+	AluJr	SINE/Alu	134	301	(11)	967144
18	16.8	2.5	0.0	chr12	120687327	120687366	(12587943)	+	(GCT)n	Simple_repeat	1	41	(0)	967692
15	18.9	6.2	0.0	chr12	120687385	120687432	(12587877)	+	(GGCGC)n	Simple_repeat	1	51	(0)	967693
2876	21.2	10.8	5.6	chr12	120876844	120877498	(12397811)	+	L1MB3	LINE/L1	3251	3959	(2360)	968013
2458	10.5	0.0	0.0	chr12	120877499	120877811	(12397498)	+	AluSq2	SINE/Alu	1	313	(0)	968021
1901	13.1	0.3	1.4	chr12	121210498	121210794	(12064515)	+	AluJr	SINE/Alu	1	294	(18)	968859
1947	12.8	2.1	0.0	chr12	121647182	121647455	(11627854)	+	AluJb	SINE/Alu	15	294	(18)	969925
1721	11.6	1.4	4.6	chr12	121838980	121839282	(11436027)	C	AluJr	SINE/Alu	(18)	294	2	970432
1882	15.7	0.0	0.7	chr12	121864272	121864570	(11410739)	+	AluJr	SINE/Alu	2	298	(14)	970506
2297	6.2	0.0	0.3	chr12	121864572	121864855	(11410454)	+	AluY	SINE/Alu	1	284	(27)	970507
265	17.0	0.0	0.4	chr12	121888506	121888557	(11386752)	+	L2c	LINE/L2	3346	3424	(2)	970592
188	35.2	7.4	7.4	chr12	122413660	122413754	(10861555)	+	L3b	LINE/CR1	5018	5112	(120)	971745
403	30.6	4.2	3.6	chr12	122413825	122413990	(10861319)	+	AmnSINE1	SINE/5S-Deu-L2	183	349	(226)	971746
707	29.6	10.4	7.1	chr12	122527565	122528159	(10747150)	+	L2a	LINE/L2	2770	3426	(0)	972055
196	23.0	7.5	6.5	chr12	123270154	123270246	(10005063)	+	OldhAT1	DNA/hAT-Ac	1695	1788	(1060)	973653
1826	15.6	4.3	0.3	chr12	123815700	123816008	(9459301)	C	Tigger3a	DNA/TcMar-Tigger	(17)	331	10	974999
3100	22.5	2.6	3.8	chr12	123816042	123816776	(9458533)	+	MER21C	LTR/ERVL	32	757	(181)	975000
2154	23.0	4.7	2.4	chr12	124504424	124505047	(8770262)	+	L1MB5	LINE/L1	5527	6165	(9)	976171
333	27.3	4.9	1.6	chr12	124764701	124764836	(8510473)	C	MIRc	SINE/MIR	(52)	216	80	976781
679	1.4	0.0	0.0	chr12	124927842	124927915	(8347394)	C	tRNA-Phe-TTY	tRNA	(2)	74	1	977166
568	27.6	4.1	2.0	chr12	124928036	124928262	(8347047)	+	L2a	LINE/L2	3126	3424	(2)	977167
659	0.0	0.0	0.0	chr12	124939647	124939718	(8335591)	C	tRNA-Asp-GAY	tRNA	(3)	72	1	977200
587	8.3	0.0	0.0	chr12	124939966	124940037	(8335272)	+	tRNA-Ala-GCG	tRNA	1	72	(3)	977201
248	21.8	1.3	3.7	chr12	124940188	124940268	(8335041)	C	MER5A	DNA/hAT-Charlie	(63)	126	48	977202
331	29.4	17.5	6.5	chr12	124940369	124940722	(8334587)	C	L2a	LINE/L2	(18)	3357	2960	977203
537	27.2	14.6	0.6	chr12	126347441	126347599	(6927710)	+	MER58A	DNA/hAT-Charlie	40	224	(0)	979662
869	24.1	1.3	10.1	chr12	130545265	130545591	(2729718)	+	MER33	DNA/hAT-Charlie	5	302	(22)	986824
29	27.3	2.5	6.0	chr12	132761991	132762152	(513157)	+	(GCGG)n	Simple_repeat	1	166	(0)	989909
439	18.3	1.9	0.9	chr12	132762410	132762514	(512795)	+	AluJb	SINE/Alu	2	107	(205)	989910
291	7.7	0.0	0.0	chr12	132762515	132762553	(512756)	C	MADE1	DNA/TcMar-Mariner	(41)	39	1	989911
2324	9.1	0.0	0.0	chr12	132762611	132762907	(512402)	C	AluSx1	SINE/Alu	(15)	297	1	989912
21	6.4	0.0	2.9	chr12	132887158	132887192	(388117)	+	(CCCGGC)n	Simple_repeat	1	35	(0)	990111
911	17.5	0.0	6.2	chr12	132956529	132956705	(318604)	C	AluJo	SINE/Alu	(10)	302	137	990230
6716	10.2	0.9	2.0	chr12	132963830	132964793	(310516)	+	LTR13_	LTR/ERVK	1	954	(0)	990255
16	23.9	0.0	8.6	chr12	133037457	133037537	(237772)	+	G-rich	Low_complexity	1	81	(0)	990398
264	22.2	0.0	0.0	chr12	133037947	133037991	(237318)	C	Alu	SINE/Alu	(88)	45	1	990399
3692	9.8	7.8	0.2	chr12	133079464	133079975	(195334)	+	MER41A	LTR/ERV1	1	554	(0)	990480
1540	18.8	0.0	8.2	chr12	133139761	133139921	(135388)	+	AluJr4	SINE/Alu	1	140	(172)	990580
2183	15.2	0.3	0.0	chr12	133139922	133140231	(135078)	+	AluJb	SINE/Alu	1	311	(1)	990581
1540	18.8	0.0	8.2	chr12	133140232	133140398	(134911)	+	AluJr4	SINE/Alu	141	302	(10)	990580
16	0.0	0.0	0.0	chr12	133140429	133140446	(134863)	+	(T)n	Simple_repeat	1	18	(0)	990582
472	19.8	3.0	0.0	chr12	133140455	133140550	(134759)	C	MIR	SINE/MIR	(25)	237	139	990583
2011	13.6	0.7	0.3	chr12	133207527	133207813	(67496)	+	AluSx1	SINE/Alu	1	288	(24)	990692
483	27.0	12.6	2.8	chr12	133207833	133208065	(67244)	+	L1MC3	LINE/L1	3827	4081	(2065)	990693
2826	1.6	0.0	0.0	chr13	19565205	19565508	(94798820)	C	AluY	SINE/Alu	(7)	304	1	992615
13	22.4	0.0	4.4	chr13	20161087	20161131	(94203197)	+	(CGCCG)n	Simple_repeat	1	45	(0)	993859
404	18.7	18.7	1.6	chr13	20394523	20394712	(93969616)	+	MLT1B	LTR/ERVL-MaLR	28	257	(133)	994198
653	29.9	12.6	1.4	chr13	20876288	20876733	(93487595)	+	L1M5	LINE/L1	4703	5209	(937)	994998
2383	7.4	12.0	4.9	chr13	20876734	20877146	(93487182)	C	LTR12B	LTR/ERV1	(119)	548	1	995000
13	11.8	7.7	2.4	chr13	21458926	21458964	(92905364)	+	(GCGTCCG)n	Simple_repeat	1	42	(0)	996140
24	30.0	1.8	2.6	chr13	21459329	21459439	(92904889)	+	(CCCCCCG)n	Simple_repeat	1	113	(0)	996141
2211	12.0	0.0	1.3	chr13	21950356	21950664	(92413664)	C	AluSz	SINE/Alu	(6)	306	2	996872
18	10.5	0.0	0.0	chr13	25047466	25047496	(89316832)	+	(GGGA)n	Simple_repeat	1	31	(0)	1001212
31	19.1	3.9	0.0	chr13	26254168	26254244	(88110084)	+	(TGAG)n	Simple_repeat	1	80	(0)	1002972
16	24.0	2.0	0.0	chr13	26254578	26254626	(88109702)	+	(CCCCGGC)n	Simple_repeat	1	50	(0)	1002973
188	22.2	3.6	8.5	chr13	27425339	27425397	(86938931)	C	L2a	LINE/L2	(59)	3367	3312	1004934
1714	15.1	10.8	0.0	chr13	27866557	27866821	(86497507)	C	AluJo	SINE/Alu	(14)	298	2	1005653
13	20.3	6.7	0.0	chr13	28495215	28495259	(85869069)	+	(TCC)n	Simple_repeat	1	48	(0)	1006835
15	0.0	0.0	0.0	chr13	29849785	29849803	(84514525)	+	(CGT)n	Simple_repeat	1	19	(0)	1008713
23	25.9	4.6	0.0	chr13	29850315	29850403	(84513925)	+	(CGCCTC)n	Simple_repeat	1	93	(0)	1008714
391	28.4	6.1	1.2	chr13	30342243	30342413	(84021915)	C	MIRb	SINE/MIR	(82)	186	7	1009495
18	22.8	3.6	0.0	chr13	30464854	30464862	(83899466)	+	(GCGCGG)n	Simple_repeat	24	58	(0)	1009737
12	15.5	3.5	0.0	chr13	30464885	30464913	(83899415)	+	G-rich	Low_complexity	1	30	(0)	1009739
15	11.7	0.0	0.0	chr13	30464913	30464940	(83899388)	+	(CCCTC)n	Simple_repeat	1	28	(0)	1009740
15	28.6	1.5	2.9	chr13	30464956	30465022	(83899306)	+	(CCGC)n	Simple_repeat	1	68	(0)	1009741
12	9.2	0.0	4.0	chr13	30465086	30465110	(83899218)	+	(CGCC)n	Simple_repeat	1	25	(0)	1009742
72	20.3	5.0	5.1	chr13	30465170	30465450	(83898878)	+	(CGC)n	Simple_repeat	1	295	(0)	1009743
21	26.6	5.8	0.0	chr13	31053687	31053772	(83310556)	+	(CACA)n	Simple_repeat	1	91	(0)	1010801
310	31.2	0.9	3.5	chr13	32409501	32409613	(81954715)	C	L2c	LINE/L2	(11)	3376	3267	1012714
519	33.0	2.9	3.7	chr13	32409871	32410112	(81954216)	+	L3	LINE/CR1	3577	3816	(283)	1012712
15	23.9	4.3	6.1	chr13	32587131	32587224	(81777104)	+	G-rich	Low_complexity	1	98	(0)	1013056
12	7.7	3.2	6.2	chr13	34943295	34943325	(79421003)	+	(CTCCT)n	Simple_repeat	1	32	(0)	1016533
8229	9.7	1.5	2.2	chr13	36224249	36225209	(78139119)	+	L1PA16	LINE/L1	4106	5060	(1086)	1018232
4762	11.6	5.6	0.0	chr13	38667048	38667805	(75696523)	+	THE1B-int	LTR/ERVL-MaLR	1	803	(777)	1021556
2515	18.9	2.8	5.0	chr13	38667810	38668057	(75696271)	+	L1MA7	LINE/L1	5535	5796	(495)	1021557
18	7.6	0.0	0.0	chr13	38687431	38687458	(75676870)	+	(GCT)n	Simple_repeat	1	28	(0)	1021594
12	27.1	0.0	0.0	chr13	40993213	40993252	(73371076)	+	(GCAGCA)n	Simple_repeat	1	40	(0)	1025043
1838	17.3	0.7	1.3	chr13	40993484	40993784	(73370544)	C	AluJr	SINE/Alu	(13)	299	1	1025044
30	0.0	0.0	0.0	chr13	41062097	41062124	(73302204)	+	(T)n	Simple_repeat	1	28	(0)	1025164
714	25.3	16.9	5.3	chr13	41231535	41231758	(73132570)	+	HAL1	LINE/L1	649	892	(1615)	1025481
1653	16.5	0.0	9.6	chr13	41231759	41232091	(73132237)	+	AluJb	SINE/Alu	1	301	(11)	1025482
714	25.3	16.9	5.3	chr13	41232092	41232504	(73131824)	+	HAL1	LINE/L1	893	1375	(1132)	1025481
12	15.7	2.6	5.0	chr13	41311487	41311525	(73052803)	+	(CCTG)n	Simple_repeat	1	40	(0)	1025640
753	24.5	0.0	1.3	chr13	41858932	41859090	(72505238)	+	AluJr	SINE/Alu	138	294	(18)	1026462
17	23.2	3.8	4.9	chr13	42040494	42040572	(72323756)	+	G-rich	Low_complexity	1	82	(0)	1026755
1813	26.0	11.5	6.1	chr13	43495196	43496375	(70867953)	C	L1ME2	LINE/L1	(12)	6152	4915	1028957
1809	17.6	1.3	1.0	chr13	43496376	43496681	(70867647)	C	AluJo	SINE/Alu	(5)	307	1	1028958
11	27.6	0.0	0.0	chr13	43786271	43786309	(70578019)	+	G-rich	Low_complexity	1	39	(0)	1029332
15	15.9	2.9	0.0	chr13	43786684	43786718	(70577610)	+	(CGCGG)n	Simple_repeat	1	36	(0)	1029333
12	12.0	0.0	6.5	chr13	43786718	43786748	(70577580)	+	(CTC)n	Simple_repeat	1	31	(0)	1029334
17	34.5	0.0	0.0	chr13	43786939	43786994	(70577334)	+	(GC)n	Simple_repeat	1	56	(0)	1029335
16	21.6	0.0	0.0	chr13	44436971	44437002	(69927326)	+	(C)n	Simple_repeat	1	32	(0)	1030298
1404	14.4	0.7	15.8	chr13	45418796	45419150	(68945178)	+	AluSx1	SINE/Alu	2	302	(10)	1032248
1379	22.1	19.4	2.0	chr13	46268117	46268883	(68095445)	+	L1MEd	LINE/L1	880	1799	(5287)	1033588
10771	8.4	5.3	0.9	chr13	46935113	46936619	(67427709)	C	LTR12C	LTR/ERV1	(0)	1579	3	1034650
19254	14.0	6.0	1.1	chr13	46936620	46938985	(67425343)	+	L1PA7	LINE/L1	1165	3711	(3854)	1034649
2628	7.0	0.3	1.3	chr13	48095346	48095659	(66268669)	C	AluY	SINE/Alu	(0)	311	1	1036247
12	15.3	5.3	2.5	chr13	48975985	48976022	(65388306)	+	(GCGGAG)n	Simple_repeat	1	40	(0)	1037665
30	3.1	0.0	0.0	chr13	48976583	48976615	(65387713)	+	(CGGGGG)n	Simple_repeat	1	33	(0)	1037666
673	31.0	7.4	3.8	chr13	49042379	49042494	(65321834)	C	L1M5	LINE/L1	(2974)	3172	3042	1037749
1664	18.1	3.1	2.1	chr13	49042495	49042781	(65321547)	+	AluJb	SINE/Alu	2	291	(21)	1037750
673	31.0	7.4	3.8	chr13	49042782	49042952	(65321376)	C	L1M5	LINE/L1	(3105)	3041	2865	1037749
75	15.5	4.7	4.1	chr13	49996819	49997027	(64367301)	+	G-rich	Low_complexity	1	210	(0)	1039473
1984	16.9	0.7	0.3	chr13	50450130	50450436	(63913892)	+	AluJo	SINE/Alu	1	308	(4)	1040154
830	25.4	2.3	7.6	chr13	52772629	52772826	(61591502)	+	MER103C	DNA/hAT-Charlie	105	296	(1)	1043641
280	38.4	2.0	0.7	chr13	52772855	52773001	(61591327)	C	MIR3	SINE/MIR	(56)	152	4	1043643
4930	15.1	1.6	8.8	chr13	52773187	52773226	(61591102)	C	L1MB3	LINE/L1	(2)	6181	6147	1043644
1978	14.1	2.6	1.3	chr13	52773227	52773532	(61590796)	+	AluSx	SINE/Alu	1	310	(2)	1043645
4028	15.9	1.3	0.5	chr13	56340364	56341107	(58023221)	+	L1PA16	LINE/L1	4771	5520	(1329)	1048215
1869	13.2	2.9	16.3	chr13	56341108	56341549	(58022779)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	1048216
836	27.0	10.1	2.2	chr13	57011520	57011792	(57352536)	+	LTR40a	LTR/ERVL	6	302	(217)	1049048
692	31.5	12.4	5.0	chr13	59633068	59633946	(54730382)	+	L2a	LINE/L2	2483	3426	(0)	1052364
417	34.2	6.8	3.7	chr13	59634096	59634338	(54729990)	C	L2a	LINE/L2	(408)	3011	2761	1052363
14	12.0	8.3	0.0	chr13	59771223	59771258	(54593070)	+	(ACAG)n	Simple_repeat	1	39	(0)	1052560
522	34.3	6.6	4.0	chr13	59771654	59771905	(54592423)	+	MIR	SINE/MIR	4	262	(0)	1052561
21	11.2	0.0	0.0	chr13	60397256	60397285	(53967043)	+	(T)n	Simple_repeat	1	30	(0)	1053462
14	7.3	6.9	0.0	chr13	60397311	60397348	(53966980)	+	(CACCCC)n	Simple_repeat	1	40	(0)	1053463
34	17.6	6.6	1.8	chr13	60397601	60397706	(53966622)	+	(GGCGGCG)n	Simple_repeat	1	113	(0)	1053464
247	31.9	2.1	3.2	chr13	60940167	60940260	(53424068)	C	L4_C_Mam	LINE/RTE-X	(2964)	2174	2082	1054173
1779	17.2	1.3	1.3	chr13	61872856	61873158	(52491170)	C	AluJo	SINE/Alu	(9)	303	1	1055299
1016	33.2	1.3	0.3	chr13	61873159	61873535	(52490793)	C	HERV16-int	LTR/ERVL	(4328)	668	288	1055298
11198	10.7	0.8	0.1	chr13	61877868	61879435	(52484893)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	1055307
1166	33.0	9.4	7.8	chr13	61885041	61886095	(52478233)	+	ERVL-E-int	LTR/ERVL	2680	3753	(1473)	1055319
2607	6.0	0.0	0.0	chr13	61886112	61886413	(52477915)	C	AluY	SINE/Alu	(9)	302	1	1055320
11506	10.1	0.2	0.4	chr13	61918142	61919724	(52444604)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	1055359
651	33.3	5.0	1.1	chr13	61969973	61970242	(52394086)	+	MER115	DNA/hAT-Tip100	380	660	(33)	1055426
3488	15.9	2.9	1.3	chr13	61998462	61999066	(52365262)	C	LTR27D	LTR/ERV1	(0)	615	1	1055468
3625	8.9	4.4	0.0	chr13	62148958	62149453	(52214875)	+	LTR12F	LTR/ERV1	1	519	(0)	1055635
6413	10.4	2.0	0.7	chr13	62149474	62151194	(52213134)	+	HERV30-int	LTR/ERV1	29	1956	(6480)	1055635
1938	13.1	0.3	8.0	chr13	62229407	62229645	(52134683)	C	AluJb	SINE/Alu	(1)	311	92	1055730
2504	9.3	0.0	0.0	chr13	62229646	62229956	(52134372)	C	AluY	SINE/Alu	(0)	311	1	1055731
3357	26.8	4.6	4.4	chr13	62357242	62358476	(52005852)	+	L1M1	LINE/L1	153	2054	(5511)	1055915
1606	21.5	1.5	2.2	chr13	62358468	62358867	(52005461)	+	L1M1	LINE/L1	2790	3186	(4379)	1055915
1536	32.2	8.5	3.5	chr13	62459414	62460479	(51903849)	+	L2a	LINE/L2	2165	3293	(133)	1056034
2109	13.0	2.3	0.0	chr13	62692791	62693089	(51671239)	+	AluSx1	SINE/Alu	1	306	(6)	1056320
1656	17.6	0.0	8.1	chr13	62899641	62899997	(51464331)	C	AluJr4	SINE/Alu	(0)	312	1	1056581
9346	16.1	3.5	0.8	chr13	63009431	63011011	(51353317)	C	MSTA-int	LTR/ERVL-MaLR	(6)	1625	1	1056706
4255	25.4	6.7	3.3	chr13	63051920	63052246	(51312082)	C	Cheshire	DNA/hAT-Charlie	(3)	2417	2079	1056761
2071	15.7	0.0	0.0	chr13	63052247	63052545	(51311783)	C	AluSx	SINE/Alu	(13)	299	1	1056762
841	36.4	3.3	3.1	chr13	63071163	63071650	(51292678)	+	L2a	LINE/L2	2935	3423	(3)	1056791
10237	22.7	3.5	6.2	chr13	63142537	63145895	(51218433)	+	L1MB7	LINE/L1	2954	6239	(443)	1056874
893	33.9	3.6	3.6	chr13	63350511	63351180	(51013148)	+	L1M2	LINE/L1	15	660	(6203)	1057143
341	35.0	3.4	6.8	chr13	63351347	63351625	(51012703)	+	L1M2	LINE/L1	1204	1472	(5394)	1057143
3334	9.5	1.2	0.0	chr13	63508499	63508984	(50855344)	C	L1PA13	LINE/L1	(5)	6158	5667	1057381
12474	20.0	2.2	4.4	chr13	63532602	63534837	(50829491)	C	L1M1	LINE/L1	(4970)	2595	421	1057401
4111	9.9	0.7	14.6	chr13	63593165	63593967	(50770361)	+	LTR12D	LTR/ERV1	563	1253	(1)	1057486
16348	10.8	2.7	1.1	chr13	64052601	64055026	(50309302)	C	MER61-int	LTR/ERV1	(0)	5217	2753	1058069
328	31.8	7.3	0.5	chr13	64311101	64311290	(50053038)	C	L1ME3A	LINE/L1	(195)	5978	5775	1058374
598	20.8	11.2	3.5	chr13	64311327	64311555	(50052773)	C	L1ME3A	LINE/L1	(495)	5678	5430	1058374
1943	22.1	8.0	2.7	chr13	64333866	64334562	(50029766)	+	LTR27D	LTR/ERV1	139	1073	(4)	1058409
852	29.7	9.1	4.8	chr13	64521851	64522397	(49841931)	C	L1MEh	LINE/L1	(631)	1604	1042	1058637
2425	18.6	7.8	8.7	chr13	64522398	64522997	(49841331)	C	LTR27B	LTR/ERV1	(0)	594	1	1058638
4819	9.8	7.1	0.4	chr13	64708337	64709067	(49655261)	C	HERVK14-int	LTR/ERVK	(5312)	784	1	1058886
2034	11.9	9.3	2.4	chr13	64709068	64709437	(49654891)	C	LTR14B	LTR/ERVK	(0)	608	211	1058886
5243	14.7	4.0	1.1	chr13	64821830	64822846	(49541482)	+	L1MA6	LINE/L1	5573	6620	(942)	1059022
924	12.4	0.0	0.0	chr13	64822850	64822970	(49541358)	C	AluSc	SINE/Alu	(188)	121	1	1059025
2278	8.9	0.4	0.0	chr13	65323162	65323483	(49040845)	C	AluY	SINE/Alu	(0)	311	1	1059653
10996	10.4	0.4	3.3	chr13	65387234	65388861	(48975467)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	1059742
764	29.8	6.7	1.7	chr13	65701555	65701905	(48662423)	C	LTR16B1	LTR/ERVL	(8)	472	98	1060122
1148	28.6	6.4	2.0	chr13	65701983	65702478	(48661850)	+	L1ME3	LINE/L1	5428	5946	(216)	1060118
4756	23.3	11.2	4.2	chr13	65829403	65830815	(48533513)	+	MER52D	LTR/ERV1	601	2123	(0)	1060266
11452	10.0	0.4	0.2	chr13	65977036	65978612	(48385716)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	1060467
2168	10.0	0.0	0.7	chr13	66756846	66757126	(47607202)	C	AluSz	SINE/Alu	(23)	289	11	1061417
227	33.1	7.5	1.4	chr13	66757202	66757339	(47606989)	+	MLT1J	LTR/ERVL-MaLR	235	381	(63)	1061416
2834	20.1	6.7	1.0	chr13	66844974	66845749	(47518579)	C	MER52D	LTR/ERV1	(923)	1200	10	1061529
6164	19.9	10.4	10.4	chr13	67106544	67108296	(47256032)	+	MER52A	LTR/ERV1	3	1755	(0)	1061860
252	13.3	6.2	0.0	chr13	67267654	67267698	(47096630)	+	LTR6A	LTR/ERV1	55	102	(462)	1062051
4160	21.2	2.3	2.4	chr13	67267786	67268729	(47095599)	+	L1MA10	LINE/L1	5392	6334	(0)	1062050
2267	8.4	2.0	1.0	chr13	67380148	67380443	(46983885)	+	AluSg	SINE/Alu	12	310	(0)	1062207
4335	16.5	5.8	1.5	chr13	67380444	67380633	(46983695)	+	LTR1B	LTR/ERV1	609	823	(1)	1062206
10365	11.2	2.0	1.2	chr13	68342064	68343631	(46020697)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	1063422
4018	21.8	4.3	4.4	chr13	68506574	68507548	(45856780)	+	LTR28B	LTR/ERV1	1	974	(0)	1063629
917	34.0	8.5	6.4	chr13	68943632	68943986	(45420342)	+	L1MDa	LINE/L1	146	509	(6031)	1064167
2571	7.4	0.0	0.3	chr13	68943987	68944298	(45420030)	+	AluY	SINE/Alu	1	311	(0)	1064168
917	34.0	8.5	6.4	chr13	68944299	68944504	(45419824)	+	L1MDa	LINE/L1	510	720	(5820)	1064167
15766	17.5	3.9	1.3	chr13	69209734	69214609	(45149719)	C	L1PA16	LINE/L1	(9)	6625	1615	1064522
16558	16.0	2.2	5.3	chr13	69368122	69371524	(44992804)	+	L1PA16	LINE/L1	3568	6858	(11)	1064695
8921	17.9	0.6	2.6	chr13	69644405	69645519	(44718809)	+	MSTA-int	LTR/ERVL-MaLR	482	1578	(53)	1065039
3479	23.1	11.4	5.4	chr13	69769407	69770414	(44593914)	+	LTR27E	LTR/ERV1	1	1077	(0)	1065224
11002	10.5	1.6	0.1	chr13	70717357	70718913	(43645415)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	1066502
5533	10.1	6.5	10.1	chr13	71087486	71088728	(43275600)	+	LTR12C	LTR/ERV1	439	1579	(0)	1067003
322	22.5	8.0	11.0	chr13	72726685	72726839	(41637489)	C	MIRb	SINE/MIR	(58)	210	61	1069241
18	14.6	2.6	0.0	chr13	72727555	72727592	(41636736)	+	(CGC)n	Simple_repeat	1	39	(0)	1069242
276	37.0	4.8	0.0	chr13	72781432	72781550	(41582778)	+	MIRc	SINE/MIR	13	137	(131)	1069318
26	0.0	0.0	0.0	chr13	72904434	72904458	(41459870)	+	(T)n	Simple_repeat	1	25	(0)	1069526
2047	14.2	0.0	0.0	chr13	72904465	72904739	(41459589)	C	AluSz6	SINE/Alu	(36)	276	2	1069527
1891	16.8	0.7	1.3	chr13	75203099	75203401	(39160927)	C	AluJr	SINE/Alu	(6)	306	6	1072971
287	26.6	0.0	0.0	chr13	75203407	75203485	(39160843)	+	L1MEh	LINE/L1	240	318	(1917)	1072972
235	22.9	0.0	0.0	chr13	75208031	75208078	(39156250)	+	L2a	LINE/L2	2343	2390	(1029)	1072975
1619	18.7	0.4	0.7	chr13	75208081	75208353	(39155975)	+	AluJr	SINE/Alu	40	311	(1)	1072976
30	23.5	0.0	0.0	chr13	75208355	75208417	(39155911)	+	A-rich	Low_complexity	1	63	(0)	1072977
267	30.8	8.7	1.7	chr13	75208422	75208593	(39155735)	+	L2a	LINE/L2	2408	2592	(827)	1072975
252	8.3	0.0	0.0	chr13	75208596	75208631	(39155697)	+	MSTC	LTR/ERVL-MaLR	1	36	(392)	1072978
337	32.4	11.9	0.0	chr13	75214395	75214564	(39149764)	+	MER91A	DNA/hAT-Tip100	1	193	(3)	1072986
19	13.9	3.9	3.8	chr13	75482400	75482450	(38881878)	+	(TCCT)n	Simple_repeat	1	53	(0)	1073409
2111	9.8	0.4	0.0	chr13	75595353	75595627	(38768701)	+	AluSp	SINE/Alu	38	313	(0)	1073624
338	32.6	8.2	0.7	chr13	75876416	75876551	(38487777)	+	MIR3	SINE/MIR	9	155	(53)	1073980
12405	16.6	4.8	1.5	chr13	76784684	76788065	(37576263)	+	L1MA9	LINE/L1	2767	6290	(22)	1075226
1215	6.7	0.0	0.0	chr13	76979902	76980051	(37384277)	+	L1PA8	LINE/L1	6007	6156	(16)	1075543
26	0.0	0.0	3.3	chr13	76980053	76980082	(37384246)	+	(AAAAT)n	Simple_repeat	1	30	(0)	1075544
1139	23.2	9.7	0.7	chr13	77300260	77300567	(37063761)	C	MER58B	DNA/hAT-Charlie	(0)	341	3	1075992
806	31.9	5.6	2.9	chr13	77300813	77301132	(37063196)	+	L1MEg	LINE/L1	110	429	(6023)	1075993
51	0.0	0.0	0.0	chr13	77326241	77326284	(37038044)	+	(AC)n	Simple_repeat	1	44	(0)	1076030
15	13.9	0.0	0.0	chr13	77326375	77326398	(37037930)	+	(AC)n	Simple_repeat	1	24	(0)	1076031
26	0.0	0.0	0.0	chr13	77326779	77326803	(37037525)	+	(CGC)n	Simple_repeat	1	25	(0)	1076032
20	13.0	0.0	0.0	chr13	77326918	77326952	(37037376)	+	(CCT)n	Simple_repeat	1	35	(0)	1076033
19	24.8	0.0	0.0	chr13	77327025	77327070	(37037258)	+	(GCC)n	Simple_repeat	1	46	(0)	1076034
16	4.3	0.0	3.9	chr13	77329420	77329445	(37034883)	+	(CTC)n	Simple_repeat	1	26	(0)	1076038
14	16.9	0.0	2.9	chr13	77697539	77697573	(36666755)	+	(CCCCGG)n	Simple_repeat	1	35	(0)	1076566
17	22.7	1.9	1.9	chr13	77697597	77697649	(36666679)	+	(CCGCC)n	Simple_repeat	1	54	(0)	1076567
30	25.8	4.7	2.2	chr13	77698061	77698189	(36666139)	+	(GCC)n	Simple_repeat	1	135	(0)	1076568
14	17.5	6.7	0.0	chr13	77698193	77698264	(36666064)	+	G-rich	Low_complexity	1	76	(0)	1076569
12	21.9	1.9	5.6	chr13	77698385	77698437	(36665891)	+	G-rich	Low_complexity	1	54	(0)	1076570
2348	5.7	0.0	0.0	chr13	78108147	78108446	(36255882)	C	L1PA13	LINE/L1	(1)	6162	5863	1077077
409	28.3	3.7	4.8	chr13	78108447	78108556	(36255772)	+	MIR	SINE/MIR	73	188	(80)	1077076
1528	28.9	12.4	0.8	chr13	78108579	78109270	(36255058)	+	L2a	LINE/L2	2381	3158	(268)	1077078
29	0.0	0.0	0.0	chr13	78594316	78594340	(35769988)	+	(AC)n	Simple_repeat	1	25	(0)	1077754
19	26.2	0.0	3.0	chr13	79405803	79405869	(34958459)	+	(CCGCCG)n	Simple_repeat	1	67	(0)	1078870
8943	16.2	2.3	5.9	chr13	79727926	79729746	(34634582)	C	L1PA15-16	LINE/L1	(814)	6035	4259	1079356
21	22.8	6.5	0.0	chr13	80340984	80341060	(34023268)	+	G-rich	Low_complexity	1	82	(0)	1080203
36	2.7	0.0	0.0	chr13	80341176	80341213	(34023115)	+	(GGA)n	Simple_repeat	1	38	(0)	1080204
2601	6.1	0.0	0.6	chr13	81725555	81725865	(32638463)	+	AluY	SINE/Alu	1	309	(2)	1081912
4818	20.0	4.7	3.1	chr13	81725866	81726679	(32637649)	+	LTR27E	LTR/ERV1	246	1077	(0)	1081911
8898	22.3	6.7	5.1	chr13	83582436	83584574	(30779754)	C	L1MD1	LINE/L1	(1416)	5121	2986	1084162
5715	7.9	1.4	0.9	chr13	83584575	83585350	(30778978)	C	LTR17	LTR/ERV1	(0)	780	1	1084165
2306	6.2	4.3	0.0	chr13	84298856	84299032	(30065296)	C	AluY	SINE/Alu	(0)	311	133	1085056
30	12.7	0.0	0.0	chr13	84299033	84299092	(30065236)	+	(T)n	Simple_repeat	1	60	(0)	1085057
2132	0.0	0.0	0.0	chr13	84299093	84299329	(30064999)	C	L1PA2	LINE/L1	(13)	6142	5906	1085058
5189	29.1	4.0	3.5	chr13	85012302	85014027	(29350301)	+	MSTD-int	LTR/ERVL-MaLR	2	1735	(0)	1085983
9131	13.9	3.6	3.8	chr13	85456869	85458451	(28905877)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	1086577
1064	30.7	1.2	1.7	chr13	85985719	85986185	(28378143)	C	L1ME3G	LINE/L1	(453)	471	56	1087218
2851	27.5	9.4	4.8	chr13	86038275	86039091	(28325237)	C	L1MC3	LINE/L1	(14)	7771	6881	1087280
39	4.7	0.0	0.0	chr13	86039092	86039136	(28325192)	+	(TGCC)n	Simple_repeat	1	45	(0)	1087281
2851	27.5	9.4	4.8	chr13	86039137	86039449	(28324879)	C	L1MC3	LINE/L1	(905)	6880	6579	1087280
2404	7.4	2.9	0.0	chr13	86309101	86309397	(28054931)	+	AluY	SINE/Alu	1	306	(5)	1087563
31	0.0	0.0	0.0	chr13	86309404	86309432	(28054896)	+	(AAAT)n	Simple_repeat	1	29	(0)	1087564
4783	14.9	0.4	2.6	chr13	86325630	86326462	(28037866)	+	L1PA12	LINE/L1	4302	5115	(1031)	1087584
9422	12.0	4.9	4.1	chr13	86433750	86435316	(27929012)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	1087722
1621	23.8	3.2	3.0	chr13	86510094	86510500	(27853828)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	1087830
1547	23.6	1.1	7.0	chr13	86890345	86890398	(27473930)	+	MLT1A0	LTR/ERVL-MaLR	1	47	(318)	1088274
2175	12.9	0.3	0.7	chr13	86890399	86890708	(27473620)	+	AluSx1	SINE/Alu	2	310	(2)	1088275
1547	23.6	1.1	7.0	chr13	86890709	86890979	(27473349)	+	MLT1A0	LTR/ERVL-MaLR	48	311	(54)	1088274
5769	7.7	1.5	0.4	chr13	87206672	87207449	(27156879)	C	HERVL-int	LTR/ERVL	(0)	5654	4868	1088703
1276	27.3	5.8	1.9	chr13	87207469	87207883	(27156445)	+	MER74B	LTR/ERVL	124	548	(74)	1088704
63	0.0	0.0	0.0	chr13	87672855	87672908	(26691420)	+	(GT)n	Simple_repeat	1	54	(0)	1089327
2116	12.7	1.0	1.0	chr13	88106906	88107205	(26257123)	+	AluSq	SINE/Alu	1	300	(13)	1089902
265	25.5	4.5	9.4	chr13	88107273	88107389	(26256939)	C	MIR3	SINE/MIR	(11)	197	87	1089903
3663	18.2	2.0	1.0	chr13	88435812	88437298	(25927030)	+	L1MA9	LINE/L1	4692	6285	(6)	1090306
6725	27.4	4.8	6.0	chr13	88578631	88581185	(25783143)	+	MER89-int	LTR/ERV1	1	2524	(4277)	1090488
846	23.4	1.3	0.0	chr13	88624195	88624348	(25739980)	+	AluJb	SINE/Alu	137	292	(20)	1090542
1038	24.3	4.5	3.6	chr13	88624674	88625028	(25739300)	+	MLT1D	LTR/ERVL-MaLR	110	503	(2)	1090543
2078	11.9	1.9	1.9	chr13	88775343	88775652	(25588676)	+	AluSx1	SINE/Alu	1	310	(2)	1090753
234	33.6	2.7	5.6	chr13	88775653	88775754	(25588574)	C	HAL1	LINE/L1	(2303)	204	109	1090752
5841	20.6	16.8	2.1	chr13	88925973	88927465	(25436863)	C	MER52A	LTR/ERV1	(0)	1755	1	1090929
2566	18.6	6.3	4.4	chr13	89241405	89241948	(25122380)	C	MER21A	LTR/ERVL	(1)	930	376	1091339
1119	18.2	4.2	5.6	chr13	89241954	89242221	(25122107)	C	MER21A	LTR/ERVL	(667)	264	1	1091339
307	32.5	5.0	0.0	chr13	89242244	89242357	(25121971)	C	MIR	SINE/MIR	(78)	184	65	1091340
1815	17.6	1.9	0.0	chr13	89366364	89366669	(24997659)	C	AluJb	SINE/Alu	(0)	312	1	1091505
703	16.3	12.5	0.7	chr13	89965764	89965957	(24398371)	C	AluJo	SINE/Alu	(0)	312	123	1092330
330	34.9	0.8	0.8	chr13	90410414	90410546	(23953782)	+	LTR16E1	LTR/ERVL	405	537	(1)	1092882
1188	22.9	11.0	2.0	chr13	90410756	90411160	(23953168)	+	L1MEc	LINE/L1	22	467	(5933)	1092883
2215	11.7	0.0	0.0	chr13	91063277	91063595	(23300733)	C	AluSx	SINE/Alu	(0)	312	1	1093721
2221	10.8	0.0	0.7	chr13	92481847	92482142	(21882186)	+	AluSq2	SINE/Alu	1	294	(19)	1095631
339	37.8	4.2	4.5	chr13	92482185	92482497	(21881831)	+	L2	LINE/L2	2592	2903	(516)	1095632
1067	8.3	0.0	0.0	chr13	92628265	92628397	(21735931)	C	AluYc	SINE/Alu	(1)	298	166	1095829
357	29.4	10.4	6.1	chr13	94167600	94167886	(20196442)	C	L2b	LINE/L2	(263)	3112	2826	1097902
229	32.5	1.3	1.3	chr13	94211060	94211137	(20153191)	C	MamRTE1	LINE/RTE-BovB	(68)	3744	3667	1097971
19	17.6	0.0	0.0	chr13	94211146	94211184	(20153144)	+	(TTTTG)n	Simple_repeat	1	39	(0)	1097972
27	0.0	0.0	0.0	chr13	94232987	94233012	(20131316)	+	(T)n	Simple_repeat	1	26	(0)	1098003
8229	20.0	2.2	1.3	chr13	94245751	94247811	(20116517)	C	L1MA9	LINE/L1	(532)	5780	3685	1098018
594	20.4	10.2	0.0	chr13	94548873	94549004	(19815324)	C	MER5A	DNA/hAT-Charlie	(42)	147	1	1098497
661	1.4	0.0	0.0	chr13	94549650	94549722	(19814606)	C	tRNA-Phe-TTY	tRNA	(3)	73	1	1098498
2336	10.7	0.0	0.0	chr13	94639540	94639837	(19724491)	+	AluSz	SINE/Alu	1	298	(14)	1098646
2436	9.4	0.7	0.0	chr13	94639947	94640253	(19724075)	C	AluSx1	SINE/Alu	(2)	310	2	1098647
16	24.3	1.8	1.8	chr13	95644635	95644689	(18719639)	+	(CCCCTCC)n	Simple_repeat	1	56	(0)	1100477
20303	10.1	2.8	0.7	chr13	96041022	96046488	(18317840)	+	L1PB1	LINE/L1	293	5860	(1002)	1101022
21888	9.5	0.8	1.2	chr13	96918402	96924865	(17439463)	+	L1PA7	LINE/L1	8	6464	(5)	1102247
11	17.0	2.9	2.8	chr13	99981243	99981277	(14383051)	+	(CGAGGC)n	Simple_repeat	1	36	(0)	1107134
21	24.0	4.0	1.3	chr13	99981545	99981619	(14382709)	+	(GCGCGT)n	Simple_repeat	1	78	(0)	1107135
16	31.2	2.9	1.4	chr13	99981581	99981649	(14382679)	+	(GC)n	Simple_repeat	1	71	(0)	1107136
20	18.4	1.2	8.6	chr13	99981660	99981739	(14382589)	+	(CCTC)n	Simple_repeat	1	81	(0)	1107137
27	32.5	0.0	3.9	chr13	106917697	106917824	(7446504)	+	G-rich	Low_complexity	1	128	(0)	1116729
589	23.4	2.0	0.7	chr13	108217827	108217972	(6146356)	+	Arthur1B	DNA/hAT-Tip100	1	148	(1077)	1118469
430	19.0	0.0	0.0	chr13	108217966	108218044	(6146284)	+	Arthur1C	DNA/hAT-Tip100	285	363	(0)	1118470
17	14.6	4.1	3.9	chr13	110706167	110706215	(3658113)	+	(CACGCC)n	Simple_repeat	1	51	(0)	1121627
2645	4.8	0.3	0.0	chr13	111066946	111067255	(3297073)	+	AluY	SINE/Alu	1	311	(0)	1122117
286	21.9	2.0	2.9	chr13	112195639	112196388	(2167940)	+	(CCTT)n	Simple_repeat	1	765	(0)	1123264
596	8.8	0.9	1.8	chr13	112196394	112197355	(2166973)	+	(CCCTGGTT)n	Simple_repeat	1	971	(0)	1123265
17	12.7	0.0	0.0	chr13	112588396	112588421	(1775907)	+	(GT)n	Simple_repeat	1	26	(0)	1123662
22726	6.3	1.1	1.4	chr13	113383173	113384521	(979807)	C	L1PB1	LINE/L1	(962)	5900	4554	1124619
9431	1.8	22.6	0.4	chr13	114352578	114353941	(10387)	+	TAR1	Satellite/telo	314	2069	(42)	1125575
261	33.6	1.7	4.9	chr14	20332531	20332652	(86711066)	C	MIRb	SINE/MIR	(133)	135	18	1127860
2277	3.6	3.1	6.2	chr14	20342727	20343030	(86700688)	C	AluY	SINE/Alu	(17)	294	1	1127886
22	3.8	0.0	0.0	chr14	20343033	20343065	(86700653)	+	(T)n	Simple_repeat	1	33	(0)	1127887
22	19.0	0.0	0.0	chr14	20469448	20469495	(86574223)	+	(AGCGG)n	Simple_repeat	1	48	(0)	1128100
2159	10.0	2.4	4.9	chr14	20682388	20682735	(86360983)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	1128458
21	16.1	0.0	0.0	chr14	21384077	21384117	(85659601)	+	(T)n	Simple_repeat	1	41	(0)	1129660
18	24.3	1.9	0.0	chr14	21476690	21476742	(85566976)	+	(GCCCC)n	Simple_repeat	1	54	(0)	1129819
198	27.8	3.0	6.7	chr14	21538874	21538977	(85504741)	C	MIRc	SINE/MIR	(59)	209	110	1129956
1477	4.0	0.0	0.0	chr14	21676712	21676886	(85366832)	+	MER57-int	LTR/ERV1	793	967	(6570)	1130240
6777	10.8	4.1	5.0	chr14	21676881	21677950	(85365768)	+	MER57-int	LTR/ERV1	1346	2405	(5132)	1130240
1610	23.4	8.3	6.2	chr14	22333444	22333621	(84710097)	C	LTR106_Mam	LTR	(0)	708	525	1131049
452	30.0	6.2	4.0	chr14	22333622	22333874	(84709844)	+	MIR	SINE/MIR	1	259	(3)	1131050
1610	23.4	8.3	6.2	chr14	22333875	22334387	(84709331)	C	LTR106_Mam	LTR	(184)	524	1	1131049
208	34.8	2.6	8.2	chr14	22871232	22871353	(84172365)	C	L2c	LINE/L2	(0)	3387	3273	1131877
1965	10.5	3.7	0.7	chr14	23198399	23198684	(83845034)	+	AluSq2	SINE/Alu	2	296	(17)	1132453
1522	21.9	9.2	3.1	chr14	23198694	23199080	(83844638)	+	L1MC4a	LINE/L1	6358	6770	(1112)	1132454
31	0.0	0.0	0.0	chr14	24219302	24219330	(82824388)	+	(AAC)n	Simple_repeat	1	29	(0)	1133921
1834	15.4	5.8	1.3	chr14	24219331	24219536	(82824182)	+	AluJo	SINE/Alu	131	312	(0)	1133920
720	35.0	6.9	2.5	chr14	26494697	26495451	(80548267)	+	L2a	LINE/L2	2628	3421	(5)	1136873
16	35.7	2.5	3.2	chr14	26597952	26597985	(80445733)	+	(CGC)n	Simple_repeat	1	124	(0)	1137002
26	23.9	2.3	2.2	chr14	26597986	26598072	(80445646)	+	(CGCTGC)n	Simple_repeat	1	89	(0)	1137003
27	22.9	0.9	7.1	chr14	26598275	26598385	(80445333)	+	G-rich	Low_complexity	1	112	(0)	1137004
19337	12.8	1.4	2.4	chr14	28265997	28270325	(78773393)	+	L1PREC2	LINE/L1	2999	7287	(854)	1139058
13	35.4	2.1	2.1	chr14	28767705	28767797	(78275921)	+	(GGACGG)n	Simple_repeat	1	95	(0)	1139695
2977	17.4	1.8	0.0	chr14	30469175	30469658	(76574060)	+	MLT2B1	LTR/ERVL	1	493	(27)	1141866
2226	11.9	0.3	1.3	chr14	31063149	31063460	(75980258)	+	AluSx1	SINE/Alu	1	309	(3)	1142843
1577	15.0	1.5	5.9	chr14	31063461	31063598	(75980120)	+	AluJr	SINE/Alu	135	261	(51)	1142842
1448	17.5	13.2	0.0	chr14	31063599	31063906	(75979812)	+	L1MD3	LINE/L1	7641	7995	(0)	1142844
17	6.8	6.5	0.0	chr14	31207671	31207701	(75836017)	+	(GGC)n	Simple_repeat	1	33	(0)	1143146
205	21.9	1.5	9.9	chr14	31208260	31208330	(75835388)	C	MIRb	SINE/MIR	(82)	186	122	1143147
226	24.7	4.0	15.6	chr14	32004223	32004395	(75039323)	C	Charlie16a	DNA/hAT-Charlie	(126)	216	65	1144508
1132	25.9	5.2	5.4	chr14	32203782	32204341	(74839377)	C	L1MC5a	LINE/L1	(257)	2520	1962	1144829
5144	19.4	5.9	2.4	chr14	32207688	32208350	(74835368)	+	MER92-int	LTR/ERV1	3	696	(3364)	1144836
1928	14.4	5.6	1.2	chr14	32208351	32208674	(74835044)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	1144837
5144	18.9	5.7	2.4	chr14	32208675	32209586	(74834132)	+	MER92-int	LTR/ERV1	654	1606	(3612)	1144836
1881	14.6	1.3	5.9	chr14	32451983	32452333	(74591385)	C	AluJb	SINE/Alu	(0)	312	1	1145168
585	28.7	3.0	3.8	chr14	32452340	32452527	(74591191)	C	L1ME4a	LINE/L1	(298)	5826	5642	1145169
19	11.1	3.6	6.9	chr14	34630043	34630098	(72413620)	+	(CCCGCG)n	Simple_repeat	1	58	(0)	1148281
19	19.3	2.1	0.0	chr14	34630175	34630221	(72413497)	+	(GGCGG)n	Simple_repeat	1	48	(0)	1148282
26	0.0	0.0	0.0	chr14	35046224	35046248	(71997470)	+	(CCCGC)n	Simple_repeat	1	25	(0)	1149235
12	7.2	10.3	0.0	chr14	35046379	35046407	(71997311)	+	(GGCGCG)n	Simple_repeat	1	32	(0)	1149236
335	29.6	3.9	0.0	chr14	35047006	35047130	(71996588)	C	MIRb	SINE/MIR	(21)	247	118	1149237
17	14.3	4.0	3.9	chr14	35404653	35404702	(71639016)	+	G-rich	Low_complexity	1	52	(0)	1149965
13	8.5	0.0	3.7	chr14	35826847	35826873	(71216845)	+	(CGGGG)n	Simple_repeat	1	27	(0)	1150696
2214	28.9	9.6	3.5	chr14	36173689	36175415	(70868303)	C	L1MEf	LINE/L1	(4549)	1866	37	1151237
20	0.0	0.0	0.0	chr14	37197388	37197409	(69846309)	+	(A)n	Simple_repeat	1	22	(0)	1152646
11490	9.6	1.9	1.7	chr14	37205939	37207095	(69836623)	+	THE1B-int	LTR/ERVL-MaLR	418	1580	(0)	1152660
1805	13.2	5.7	0.0	chr14	37340429	37340708	(69703010)	+	AluJo	SINE/Alu	1	297	(15)	1152857
1636	19.8	0.0	0.3	chr14	43465539	43465821	(63577897)	C	AluJb	SINE/Alu	(5)	307	26	1160532
28	23.1	0.0	3.7	chr14	44897468	44897548	(62146170)	+	(GGC)n	Simple_repeat	1	81	(0)	1162310
1994	17.0	0.3	0.3	chr14	47936229	47936540	(59107178)	+	AluJb	SINE/Alu	1	312	(0)	1166184
16	15.0	1.9	7.5	chr14	49634052	49634103	(57409615)	+	(CGG)n	Simple_repeat	1	53	(0)	1168309
32	31.1	0.0	3.7	chr14	49767978	49768120	(57275598)	+	(GGC)n	Simple_repeat	1	137	(0)	1168592
17	4.3	0.0	0.0	chr14	50312360	50312383	(56731335)	+	(CTCC)n	Simple_repeat	1	24	(0)	1169748
22	14.7	2.2	0.0	chr14	50312611	50312655	(56731063)	+	(CGCCCC)n	Simple_repeat	1	46	(0)	1169749
187	31.9	13.8	0.0	chr14	50312897	50312965	(56730753)	C	L2b	LINE/L2	(22)	3353	3274	1169750
278	24.1	12.6	1.2	chr14	50313052	50313135	(56730583)	+	MIR3	SINE/MIR	91	185	(23)	1169751
24	26.0	0.0	5.5	chr14	50532503	50532593	(56511125)	+	(GCC)n	Simple_repeat	1	91	(0)	1170125
19	11.5	2.6	0.0	chr14	50560764	50560801	(56482917)	+	(GGGCGGC)n	Simple_repeat	1	39	(0)	1170157
208	17.5	0.0	0.0	chr14	50947486	50947525	(56096193)	C	MIRc	SINE/MIR	(135)	133	94	1170729
4150	16.8	6.5	1.2	chr14	51205973	51206824	(55836894)	C	MER21C	LTR/ERVL	(29)	909	9	1171122
25	21.7	2.1	5.2	chr14	51651786	51651879	(55391839)	+	G-rich	Low_complexity	1	96	(0)	1171808
30	0.0	0.0	0.0	chr14	51860686	51860714	(55183004)	+	(GCTGG)n	Simple_repeat	1	29	(0)	1172095
313	24.8	7.3	3.8	chr14	52692671	52692775	(54350943)	+	L2c	LINE/L2	3277	3385	(2)	1173336
37	17.0	1.2	2.4	chr14	52951228	52951310	(54092408)	+	G-rich	Low_complexity	1	84	(0)	1173829
19	18.9	0.0	0.0	chr14	53953921	53953956	(53089762)	+	(AC)n	Simple_repeat	1	36	(0)	1175256
20	16.2	5.3	1.7	chr14	54509883	54509939	(52533779)	+	(GGCTG)n	Simple_repeat	1	60	(0)	1176039
380	17.1	1.2	3.5	chr14	55075215	55075299	(51968419)	C	PRIMA4-int	LTR/ERV1	(7690)	580	498	1176982
2037	12.7	2.9	0.7	chr14	55075303	55075601	(51968117)	C	AluJb	SINE/Alu	(6)	306	1	1176983
19	15.5	3.7	3.6	chr14	55271644	55271697	(51772021)	+	G-rich	Low_complexity	1	56	(0)	1177395
1738	7.8	0.0	5.0	chr14	55599464	55599721	(51443997)	C	AluSx1	SINE/Alu	(11)	301	57	1178001
49	2.1	0.0	0.0	chr14	56807966	56808014	(50235704)	+	(GCCCCGCA)n	Simple_repeat	1	49	(0)	1179762
975	16.4	7.6	0.0	chr14	59756830	59756988	(47286730)	C	AluJb	SINE/Alu	(5)	307	136	1184116
553	9.5	2.3	0.0	chr14	59757019	59757102	(47286616)	C	L1MC1	LINE/L1	(14)	6319	6234	1184117
2084	17.0	0.0	1.9	chr14	59757103	59757220	(47286498)	+	MLT1A0	LTR/ERVL-MaLR	1	115	(250)	1184118
27	14.2	6.5	0.0	chr14	60165237	60165298	(46878420)	+	(AGC)n	Simple_repeat	1	66	(0)	1184649
468	20.7	0.0	0.0	chr14	60165538	60165624	(46878094)	+	AluSz	SINE/Alu	48	134	(178)	1184650
694	25.2	6.0	10.6	chr14	60516198	60516583	(46527135)	+	L2c	LINE/L2	3017	3383	(4)	1185117
2223	9.9	0.0	0.3	chr14	61762982	61763290	(45280428)	C	AluSx3	SINE/Alu	(0)	311	1	1187017
13	24.5	4.2	0.0	chr14	63727615	63727662	(43316056)	+	(GCGGC)n	Simple_repeat	1	50	(0)	1189891
23	25.5	4.3	2.1	chr14	63728076	63728168	(43315550)	+	(GCCGC)n	Simple_repeat	1	97	(0)	1189892
22	6.7	0.0	0.0	chr14	64503857	64503888	(42539830)	+	(GTGC)n	Simple_repeat	1	32	(0)	1191408
13	9.3	0.0	0.0	chr14	64503883	64503905	(42539813)	+	(GCCC)n	Simple_repeat	1	23	(0)	1191409
19	10.4	5.1	6.5	chr14	64504805	64504863	(42538855)	+	(CCGCGCG)n	Simple_repeat	1	62	(0)	1191410
19993	10.8	2.4	1.4	chr14	65508802	65511995	(41531723)	C	L1MA2	LINE/L1	(867)	6698	3466	1193305
15	18.6	0.0	8.6	chr14	66508442	66508499	(40535219)	+	(CTCCCGG)n	Simple_repeat	1	58	(0)	1194714
5977	14.4	1.0	3.4	chr14	66517354	66518094	(40525624)	+	L1MA5A	LINE/L1	4557	5295	(1002)	1194723
25	16.5	1.8	1.8	chr14	67241340	67241395	(39802323)	+	(GGC)n	Simple_repeat	1	57	(0)	1195681
12	11.5	3.3	3.2	chr14	67241593	67241622	(39802096)	+	(GCGG)n	Simple_repeat	1	31	(0)	1195682
14	24.0	0.0	0.0	chr14	68978968	68979006	(38064712)	+	(TCCCGG)n	Simple_repeat	1	39	(0)	1198596
21	18.5	1.7	3.3	chr14	68979117	68979175	(38064543)	+	(GCTGG)n	Simple_repeat	1	60	(0)	1198597
11	11.2	6.9	0.0	chr14	68979327	68979355	(38064363)	+	G-rich	Low_complexity	1	31	(0)	1198598
1595	14.7	8.0	0.0	chr14	69360384	69360635	(37683083)	+	AluSz	SINE/Alu	39	312	(0)	1199373
25	21.0	2.9	1.4	chr14	69360636	69360705	(37683013)	+	A-rich	Low_complexity	1	72	(0)	1199374
751	11.2	3.1	0.0	chr14	69360706	69360830	(37682888)	+	MER5A	DNA/hAT-Charlie	61	189	(0)	1199375
14	18.8	0.0	5.0	chr14	69611256	69611295	(37432423)	+	(AAT)n	Simple_repeat	1	40	(0)	1199889
16	16.6	7.6	4.2	chr14	69611438	69611503	(37432215)	+	(CGG)n	Simple_repeat	1	71	(0)	1199890
20	20.9	6.1	0.0	chr14	69611512	69611581	(37432137)	+	(GCCCCT)n	Simple_repeat	1	74	(0)	1199891
12	15.3	3.5	0.0	chr14	69611654	69611682	(37432036)	+	(CCTC)n	Simple_repeat	1	30	(0)	1199892
421	4.2	0.0	0.0	chr14	70328073	70328145	(36715573)	C	Alu	SINE/Alu	(0)	311	234	1201017
204	31.5	0.0	0.0	chr14	70359196	70359249	(36684469)	+	MIRb	SINE/MIR	117	170	(98)	1201066
2513	4.7	0.3	4.4	chr14	70359990	70360306	(36683412)	+	AluSq10	SINE/Alu	1	304	(9)	1201067
5176	9.1	0.9	0.1	chr14	70428450	70429130	(36614588)	C	L1PA14	LINE/L1	(0)	6161	5476	1201206
30	0.0	0.0	0.0	chr14	70809057	70809084	(36234634)	+	(CCT)n	Simple_repeat	1	28	(0)	1201774
13	4.8	4.5	0.0	chr14	70809112	70809133	(36234585)	+	(CGG)n	Simple_repeat	1	23	(0)	1201775
16	11.2	0.0	3.2	chr14	70809198	70809228	(36234490)	+	(GCC)n	Simple_repeat	1	31	(0)	1201776
8486	12.9	2.1	2.0	chr14	71160559	71162543	(35881175)	+	L1MA4	LINE/L1	4324	6300	(0)	1202298
14611	16.8	4.2	2.5	chr14	71599451	71602673	(35441045)	C	L1MA4A	LINE/L1	(474)	6531	3244	1203079
17	5.5	10.5	0.0	chr14	71932316	71932353	(35111365)	+	(GCCCAGGT)n	Simple_repeat	1	42	(0)	1203541
2214	9.8	1.0	0.0	chr14	73545993	73546279	(33497439)	C	AluSx1	SINE/Alu	(21)	291	2	1206524
1735	17.9	1.0	2.3	chr14	73546362	73546663	(33497055)	C	AluJb	SINE/Alu	(14)	298	1	1206525
478	27.7	2.6	9.1	chr14	76531947	76532232	(30511486)	C	CR1-16_AMi	LINE/CR1	(399)	452	186	1212392
16700	13.2	4.3	3.0	chr14	81037453	81040625	(26003093)	+	L1MA6	LINE/L1	3513	6724	(838)	1220022
15	34.0	1.1	3.2	chr14	88562934	88563026	(18480692)	+	G-rich	Low_complexity	1	94	(0)	1230629
17	8.6	5.1	2.4	chr14	88563467	88563505	(18480213)	+	G-rich	Low_complexity	1	41	(0)	1230630
189	35.3	6.6	2.5	chr14	89121165	89121227	(17922491)	C	MIRc	SINE/MIR	(91)	177	108	1231559
52	0.0	0.0	0.0	chr14	89121228	89121274	(17922444)	+	(AAAT)n	Simple_repeat	1	47	(0)	1231561
189	35.3	6.6	2.5	chr14	89121275	89121327	(17922391)	C	MIRc	SINE/MIR	(161)	107	53	1231559
386	28.2	1.6	1.6	chr14	89121433	89121558	(17922160)	+	MLT1K	LTR/ERVL-MaLR	454	579	(16)	1231562
292	35.3	3.8	1.0	chr14	89121603	89121705	(17922013)	C	L2b	LINE/L2	(0)	3375	3270	1231563
27	14.9	1.6	3.1	chr14	90828278	90828340	(16215378)	+	G-rich	Low_complexity	1	64	(0)	1234548
2064	14.2	1.3	0.0	chr14	91099251	91099545	(15944173)	+	AluJb	SINE/Alu	1	299	(13)	1235038
380	28.6	0.0	0.9	chr14	91099746	91099858	(15943860)	+	MIR3	SINE/MIR	24	135	(73)	1235039
1172	11.9	5.8	7.1	chr14	91454754	91454963	(15588755)	+	AluJo	SINE/Alu	76	282	(30)	1235714
1474	13.4	2.6	0.5	chr14	91454972	91455195	(15588523)	+	AluJb	SINE/Alu	84	312	(0)	1235715
14246	10.8	2.4	0.6	chr14	91554507	91556489	(15487229)	+	L1PA10	LINE/L1	8	2027	(4326)	1235939
552	25.6	8.0	5.0	chr14	91575106	91575350	(15468368)	+	MLT1G1	LTR/ERVL-MaLR	2	252	(297)	1235972
3950	11.0	0.7	1.6	chr14	91575368	91575971	(15467747)	+	MER51C	LTR/ERV1	1	578	(62)	1235973
12	13.1	2.7	5.3	chr14	91836330	91836366	(15207352)	+	(CGCCGG)n	Simple_repeat	1	38	(0)	1236377
14	21.4	5.7	4.0	chr14	91836469	91836538	(15207180)	+	(CCTAC)n	Simple_repeat	1	74	(0)	1236378
49	23.4	0.0	0.0	chr14	91836571	91836685	(15207033)	+	G-rich	Low_complexity	1	115	(0)	1236379
273	35.9	2.2	6.2	chr14	94080453	94080645	(12963073)	+	MIRb	SINE/MIR	47	231	(37)	1240579
21	17.8	0.0	0.0	chr14	94080696	94080733	(12962985)	+	A-rich	Low_complexity	1	38	(0)	1240580
13	16.9	3.0	0.0	chr14	94081174	94081206	(12962512)	+	(GCAGCT)n	Simple_repeat	1	34	(0)	1240581
24	13.1	5.4	5.1	chr14	94174232	94174305	(12869413)	+	(CCCCG)n	Simple_repeat	1	78	(0)	1240752
12	0.0	0.0	5.0	chr14	94174472	94174491	(12869227)	+	(CCG)n	Simple_repeat	1	20	(0)	1240753
305	28.7	15.2	7.6	chr14	95551243	95551874	(11491844)	C	HAL1	LINE/L1	(175)	2332	1615	1243228
1147	18.7	9.9	8.0	chr14	96846647	96846983	(10196735)	+	MER2	DNA/TcMar-Tigger	2	345	(0)	1245627
13	19.4	4.9	0.0	chr14	96847101	96847141	(10196577)	+	(TTCTTTA)n	Simple_repeat	1	43	(0)	1245628
32	0.0	0.0	0.0	chr14	99269876	99269910	(7773808)	+	(A)n	Simple_repeat	1	35	(0)	1249749
2463	6.5	1.0	0.0	chr14	100378173	100378466	(6665252)	C	AluSq2	SINE/Alu	(16)	297	1	1251761
20	0.0	0.0	0.0	chr14	101360223	101360244	(5683474)	+	(A)n	Simple_repeat	1	22	(0)	1253040
787	28.8	9.2	5.1	chr14	103410432	103410538	(3633180)	C	L1ME3G	LINE/L1	(722)	202	97	1256769
723	22.6	1.9	0.6	chr14	103410561	103410719	(3632999)	+	AluJo	SINE/Alu	143	303	(9)	1256771
228	29.2	12.3	7.6	chr14	103410737	103410992	(3632726)	C	L1M5	LINE/L1	(828)	5318	5055	1256772
835	18.3	3.5	0.0	chr14	103584034	103584197	(3459521)	C	FRAM	SINE/Alu	(6)	170	1	1257078
1388	20.6	7.5	3.3	chr14	103584198	103584528	(3459190)	C	MER21C	LTR/ERVL	(469)	469	124	1257077
1454	17.5	4.6	6.8	chr14	103584547	103584857	(3458861)	C	L1MB7	LINE/L1	(549)	5625	5309	1257075
771	11.1	0.9	0.0	chr14	105049446	105049553	(1994165)	C	AluSz6	SINE/Alu	(195)	117	9	1259168
1165	14.1	0.0	0.0	chr14	105049634	105049803	(1993915)	+	AluJr	SINE/Alu	137	306	(6)	1259169
1751	18.8	7.1	0.2	chr14	105843026	105843331	(1200387)	C	L1MA8	LINE/L1	(1144)	4999	4665	1260082
19	16.4	6.9	1.6	chr14	105843341	105843398	(1200320)	+	(CTCTTC)n	Simple_repeat	1	62	(0)	1260084
2251	6.7	4.8	1.1	chr15	20340242	20344102	(81647087)	+	(AGCCAGCCA)n	Simple_repeat	1	4048	(0)	1263201
13	17.6	2.4	4.7	chr15	25438205	25438246	(76552943)	+	(CGCCC)n	Simple_repeat	1	43	(0)	1269998
8319	10.3	3.0	0.7	chr15	29780906	29782207	(72208982)	+	L1PREC2	LINE/L1	3049	4381	(1765)	1276003
4999	8.1	2.3	1.0	chr15	29782203	29782991	(72208198)	+	L1PREC2	LINE/L1	4646	5441	(719)	1276003
11974	9.5	0.2	0.1	chr15	31862752	31864328	(70126861)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	1279120
1863	16.6	0.0	3.1	chr15	33156274	33156589	(68834600)	C	AluJb	SINE/Alu	(0)	312	1	1280920
25	24.0	0.0	1.4	chr15	33310891	33310960	(68680229)	+	GA-rich	Low_complexity	1	70	(0)	1281194
1593	14.2	7.1	7.4	chr15	34223931	34224044	(67767145)	+	AluJb	SINE/Alu	2	113	(199)	1282505
29	0.0	0.0	0.0	chr15	34224045	34224072	(67767117)	+	(CAAAA)n	Simple_repeat	1	28	(0)	1282506
1593	14.2	7.1	7.4	chr15	34224073	34224268	(67766921)	+	AluJb	SINE/Alu	114	310	(2)	1282505
460	21.5	9.5	9.9	chr15	34224269	34224331	(67766858)	C	MIRb	SINE/MIR	(211)	57	1	1282504
219	31.8	0.0	1.5	chr15	34224332	34224398	(67766791)	+	MIRb	SINE/MIR	141	206	(62)	1282507
13	17.6	3.3	8.1	chr15	34988252	34988311	(67002878)	+	(GCGGC)n	Simple_repeat	1	62	(0)	1283721
12	8.9	4.2	0.0	chr15	37102047	37102070	(64889119)	+	(GGAG)n	Simple_repeat	1	25	(0)	1286517
15	0.0	5.3	0.0	chr15	37102095	37102113	(64889076)	+	(TG)n	Simple_repeat	1	20	(0)	1286518
24	3.5	0.0	0.0	chr15	37102113	37102141	(64889048)	+	(GA)n	Simple_repeat	1	29	(0)	1286519
950	27.9	16.4	1.9	chr15	37897632	37898389	(64092800)	+	L2a	LINE/L2	2529	3426	(0)	1287469
2544	11.4	3.2	5.4	chr15	40399405	40399850	(61591339)	+	LTR12B	LTR/ERV1	1	436	(231)	1291124
896	17.9	6.4	0.7	chr15	40399851	40400094	(61591095)	C	L1MD3	LINE/L1	(485)	7510	7036	1291123
17	14.2	0.0	0.0	chr15	42581660	42581690	(59409499)	+	(CAG)n	Simple_repeat	1	31	(0)	1295404
152	6.7	0.0	0.5	chr15	44288396	44288599	(57702590)	+	(GAGA)n	Simple_repeat	1	204	(0)	1298571
20	8.6	5.4	0.0	chr15	47717493	47717529	(54273660)	+	(TGC)n	Simple_repeat	1	39	(0)	1303776
17	13.1	0.0	0.0	chr15	47717647	47717672	(54273517)	+	(T)n	Simple_repeat	1	26	(0)	1303777
559	16.1	8.5	0.0	chr15	52684131	52684248	(49306941)	+	MER3	DNA/hAT-Charlie	41	169	(40)	1311708
1773	19.3	0.0	0.7	chr15	52684254	52684554	(49306635)	+	AluJr4	SINE/Alu	2	300	(12)	1311709
241	13.1	9.2	1.4	chr15	52684555	52684624	(49306565)	+	Charlie5	DNA/hAT-Charlie	2230	2305	(319)	1311710
269	5.9	0.0	0.0	chr15	52684627	52684660	(49306529)	C	U2	snRNA	(153)	35	2	1311711
313	12.3	1.7	0.0	chr15	52684657	52684713	(49306476)	+	Charlie5	DNA/hAT-Charlie	2291	2348	(276)	1311712
18	0.0	0.0	0.0	chr15	55498594	55498613	(46492576)	+	(A)n	Simple_repeat	1	20	(0)	1315685
237	34.6	0.0	0.9	chr15	58686278	58686382	(43304807)	+	L1M4a1	LINE/L1	1279	1382	(5705)	1320605
16	14.4	8.7	0.0	chr15	60591280	60591325	(41399864)	+	(GCGG)n	Simple_repeat	1	50	(0)	1324033
201	27.9	2.9	2.9	chr15	62238703	62238772	(39752417)	C	L2c	LINE/L2	(42)	3345	3276	1326564
329	31.2	11.4	0.8	chr15	65517022	65517261	(36473928)	+	MIRc	SINE/MIR	10	260	(8)	1332810
962	22.1	10.8	4.4	chr15	65997464	65997757	(35993432)	+	L2a	LINE/L2	3112	3426	(0)	1333782
285	32.3	7.8	3.0	chr15	65997751	65998105	(35993084)	C	L2c	LINE/L2	(139)	3287	2910	1333781
231	27.5	11.8	2.4	chr15	66409115	66409237	(35581952)	C	MIRc	SINE/MIR	(56)	212	77	1334644
218	35.3	0.0	0.0	chr15	66619583	66619650	(35371539)	+	MIRc	SINE/MIR	115	182	(86)	1335096
248	22.1	14.4	4.2	chr15	66619627	66619744	(35371445)	+	MIR	SINE/MIR	72	203	(27)	1335097
759	28.4	0.0	8.3	chr15	66663085	66663349	(35327840)	C	L1ME1	LINE/L1	(6)	6173	5931	1335202
1411	16.1	13.0	0.0	chr15	66663351	66663488	(35327701)	C	AluJb	SINE/Alu	(20)	292	123	1335203
62	0.0	0.0	0.0	chr15	66663489	66663541	(35327648)	+	(TG)n	Simple_repeat	1	53	(0)	1335204
1411	16.1	13.0	0.0	chr15	66663542	66663656	(35327533)	C	AluJb	SINE/Alu	(197)	115	1	1335203
1304	28.4	2.8	3.2	chr15	66774644	66774833	(35216356)	C	L1ME2	LINE/L1	(2)	6162	5978	1335425
47	0.0	0.0	0.0	chr15	66774834	66774876	(35216313)	+	(TTTAT)n	Simple_repeat	1	43	(0)	1335426
2198	8.4	0.7	0.7	chr15	66774877	66775161	(35216028)	C	AluSq	SINE/Alu	(28)	285	1	1335427
2226	11.2	1.6	1.6	chr15	66994566	66994877	(34996312)	+	AluJb	SINE/Alu	1	312	(0)	1335846
16	8.3	0.0	0.0	chr15	66994878	66994903	(34996286)	+	(AGAAA)n	Simple_repeat	1	26	(0)	1335847
241	30.0	13.2	5.8	chr15	66995037	66995365	(34995824)	+	L2b	LINE/L2	1667	2023	(1396)	1335848
1794	17.2	1.3	3.8	chr15	67426692	67427005	(34564184)	+	AluJo	SINE/Alu	1	306	(6)	1336592
404	23.1	0.0	1.3	chr15	67427039	67427117	(34564072)	+	MER58A	DNA/hAT-Charlie	1	78	(146)	1336593
272	18.0	3.2	1.6	chr15	67427132	67427193	(34563996)	C	L1MC4	LINE/L1	(1520)	6522	6460	1336588
367	29.5	7.3	1.2	chr15	67792971	67793138	(34198051)	C	Tigger15a	DNA/TcMar-Tigger	(19)	696	518	1337142
203	33.6	6.6	2.6	chr15	67841097	67841212	(34149977)	C	L2c	LINE/L2	(1)	3386	3266	1337206
427	31.0	5.3	6.6	chr15	67941906	67942192	(34048997)	+	Charlie16a	DNA/hAT-Charlie	58	340	(2)	1337429
164	1.1	3.5	2.9	chr15	67963175	67963376	(34027813)	+	(TTTC)n	Simple_repeat	1	209	(0)	1337469
1847	16.6	0.7	0.7	chr15	67963377	67963678	(34027511)	C	AluJo	SINE/Alu	(10)	302	1	1337470
267	22.3	14.5	5.0	chr15	69321805	69321903	(32669286)	C	L2b	LINE/L2	(0)	3375	3266	1339995
2128	14.0	0.7	0.0	chr15	72039549	72039840	(29951349)	+	AluSx	SINE/Alu	1	294	(18)	1344791
1369	10.3	2.3	0.5	chr15	72040096	72040310	(29950879)	+	MER61-int	LTR/ERV1	4999	5217	(0)	1344792
2299	11.9	0.0	0.6	chr15	72312345	72312655	(29678534)	+	AluSx1	SINE/Alu	1	309	(3)	1345233
671	28.7	4.7	3.4	chr15	74127061	74127356	(27863833)	C	ORSL-2a	DNA/hAT-Tip100	(3)	339	40	1348308
16	9.7	0.0	0.0	chr15	74365306	74365327	(27625862)	+	(A)n	Simple_repeat	1	22	(0)	1348707
317	21.9	11.9	3.0	chr15	74365445	74365543	(27625646)	+	MIRb	SINE/MIR	112	220	(48)	1348708
951	24.8	9.7	5.6	chr15	74889338	74889909	(27101280)	+	L2a	LINE/L2	2817	3426	(0)	1349709
1448	14.3	11.9	1.8	chr15	74935349	74935627	(27055562)	+	AluJb	SINE/Alu	1	311	(1)	1349810
1701	12.5	1.2	0.4	chr15	74935649	74935888	(27055301)	C	AluSx	SINE/Alu	(69)	243	2	1349811
337	29.4	3.2	0.0	chr15	75125229	75125347	(26865842)	C	MIRb	SINE/MIR	(8)	260	138	1350233
527	17.4	0.0	5.4	chr15	75125349	75125440	(26865749)	C	FLAM_C	SINE/Alu	(14)	129	43	1350234
778	9.6	5.0	0.0	chr15	75125529	75125643	(26865546)	+	MER30	DNA/hAT-Charlie	1	121	(109)	1350235
13	11.6	3.6	0.0	chr15	75579312	75579339	(26411850)	+	G-rich	Low_complexity	1	29	(0)	1351123
21	24.8	2.7	1.3	chr15	75579480	75579552	(26411637)	+	G-rich	Low_complexity	1	75	(0)	1351124
214	35.0	4.1	1.7	chr15	75640758	75640876	(26350313)	+	MER5A	DNA/hAT-Charlie	62	183	(6)	1351282
6533	12.6	4.1	2.1	chr15	76743406	76745178	(25246011)	+	L1PA16	LINE/L1	4247	6038	(128)	1352991
320	25.9	0.0	8.6	chr15	77768377	77768469	(24222720)	C	L2c	LINE/L2	(5)	3382	3298	1354629
425	29.6	8.7	4.5	chr15	78213805	78214002	(23777187)	C	MIRb	SINE/MIR	(27)	241	35	1355426
418	25.6	1.3	10.3	chr15	78604302	78604421	(23386768)	C	MIR3	SINE/MIR	(49)	159	43	1356262
217	28.3	0.0	0.0	chr15	78604653	78604712	(23386477)	+	L2a	LINE/L2	3367	3426	(0)	1356264
11142	10.5	2.0	0.8	chr15	79143592	79145153	(22846036)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	1357323
10616	18.7	6.0	4.5	chr15	81621392	81621564	(20369625)	C	L1MC3	LINE/L1	(1922)	5863	5695	1361553
1997	13.9	2.9	0.7	chr15	81621565	81621867	(20369322)	+	AluJb	SINE/Alu	1	310	(2)	1361558
10616	19.9	7.8	3.8	chr15	81621868	81622394	(20368795)	C	L1MC3	LINE/L1	(2091)	5694	5144	1361553
20	24.8	2.7	2.6	chr15	82810046	82810077	(19181112)	+	(GGCTGG)n	Simple_repeat	1	60	(17)	1363497
13	6.5	5.6	5.3	chr15	82810078	82810113	(19181076)	+	G-rich	Low_complexity	1	38	(0)	1363498
20	24.8	2.7	2.6	chr15	82810114	82810120	(19181069)	+	(GGCTGG)n	Simple_repeat	61	77	(0)	1363497
2340	6.8	5.1	0.0	chr15	82986922	82987216	(19003973)	C	AluSc8	SINE/Alu	(0)	311	1	1363816
420	35.0	8.7	3.7	chr15	83010833	83011235	(18979954)	C	L2c	LINE/L2	(36)	3351	2927	1363867
341	14.3	0.0	1.8	chr15	83067477	83067533	(18923656)	C	MER5A	DNA/hAT-Charlie	(75)	114	59	1363979
12	21.1	8.2	0.0	chr15	83283327	83283375	(18707814)	+	(GGC)n	Simple_repeat	1	53	(0)	1364358
15	23.1	1.9	3.6	chr15	83283382	83283435	(18707754)	+	(CCG)n	Simple_repeat	1	55	(0)	1364359
16380	17.4	2.1	3.0	chr15	83544517	83547665	(18443524)	C	L1M1	LINE/L1	(4435)	3130	12	1364788
233	22.9	1.6	0.0	chr15	84980664	84980724	(17010465)	C	MIR3	SINE/MIR	(77)	131	70	1367055
21	27.9	0.0	0.0	chr15	85381487	85381542	(16609647)	+	(TT)n	Simple_repeat	1	56	(0)	1367730
12	29.5	0.0	2.0	chr15	88765734	88765784	(13225405)	+	(CTCTCAC)n	Simple_repeat	1	51	(0)	1372976
419	31.1	4.3	2.2	chr15	88765987	88766216	(13224973)	+	L2	LINE/L2	2260	2494	(925)	1372977
372	30.3	7.2	1.4	chr15	88804958	88805101	(13186088)	C	MIR3	SINE/MIR	(34)	174	22	1373053
28	6.0	0.0	0.0	chr15	90201650	90201684	(11789505)	+	(GCT)n	Simple_repeat	1	35	(0)	1375888
12	4.3	8.3	0.0	chr15	90201888	90201911	(11789278)	+	(GGAGA)n	Simple_repeat	1	26	(0)	1375889
1321	22.4	3.0	3.0	chr15	90536022	90536253	(11454936)	C	L1M5	LINE/L1	(1227)	4919	4682	1376566
1512	11.1	15.8	0.8	chr15	90536254	90536505	(11454684)	+	AluJb	SINE/Alu	1	297	(15)	1376567
1321	22.4	3.0	3.0	chr15	90536506	90536608	(11454581)	C	L1M5	LINE/L1	(1465)	4681	4584	1376566
614	27.0	9.6	9.8	chr15	90536769	90537063	(11454126)	C	MER102b	DNA/hAT-Charlie	(2126)	302	3	1376568
876	19.9	2.4	0.0	chr15	90674501	90674661	(11316528)	C	AluJb	SINE/Alu	(11)	301	137	1376839
2500	5.4	0.3	0.3	chr15	90674946	90675239	(11315950)	+	AluSp	SINE/Alu	1	294	(19)	1376840
12	21.1	6.2	5.9	chr15	90871296	90871375	(11119814)	+	G-rich	Low_complexity	1	85	(0)	1377286
2356	8.2	0.0	1.3	chr15	90930363	90930668	(11060521)	C	AluSz	SINE/Alu	(10)	302	1	1377367
1068	14.2	1.2	0.0	chr15	91022702	91022863	(10968326)	+	AluSx3	SINE/Alu	145	308	(3)	1377543
28	3.3	0.0	0.0	chr15	91853871	91853901	(10137288)	+	(GCG)n	Simple_repeat	1	31	(0)	1378974
29	0.0	3.2	0.0	chr15	92694374	92694404	(9296785)	+	(GATA)n	Simple_repeat	1	32	(0)	1380244
41	33.2	3.5	0.5	chr15	92694405	92694437	(9296752)	+	(TA)n	Simple_repeat	1	34	(0)	1380245
2324	10.2	0.7	0.0	chr15	92694438	92694742	(9296447)	C	AluSp	SINE/Alu	(6)	307	1	1380246
13	14.2	0.0	5.7	chr15	92883099	92883133	(9108056)	+	G-rich	Low_complexity	1	35	(0)	1380697
24	9.7	2.2	2.1	chr15	93122849	93122894	(8868295)	+	(ACTGAAA)n	Simple_repeat	1	47	(0)	1381037
2855	21.3	4.7	4.8	chr15	94444067	94444770	(7546419)	C	MER21C	LTR/ERVL	(235)	703	1	1383050
3473	19.4	4.3	2.5	chr15	96042139	96042935	(5948254)	+	L1MB5	LINE/L1	5363	6174	(0)	1385289
71	27.5	0.8	3.9	chr15	96331043	96331299	(5659890)	+	(GGC)n	Simple_repeat	1	259	(0)	1385727
31	11.0	2.0	0.0	chr15	96354141	96354189	(5637000)	+	(AC)n	Simple_repeat	1	50	(0)	1385749
2151	6.5	1.8	1.4	chr15	98427921	98428197	(3562992)	+	AluSx1	SINE/Alu	25	302	(10)	1388629
24	11.2	0.0	0.0	chr15	101489758	101489796	(501393)	+	(CGC)n	Simple_repeat	1	39	(0)	1392850
12	23.5	2.5	0.0	chr15	101489835	101489874	(501315)	+	G-rich	Low_complexity	1	41	(0)	1392851
15	15.3	0.0	5.0	chr15	101723942	101723981	(267208)	+	(GCAGG)n	Simple_repeat	1	40	(0)	1393180
17	3.6	0.0	6.2	chr15	101724553	101724584	(266605)	+	(GGGGC)n	Simple_repeat	1	32	(0)	1393181
26	0.0	0.0	0.0	chr15	101724604	101724628	(266561)	+	(GGGGC)n	Simple_repeat	1	25	(0)	1393181
2273	12.2	0.0	0.0	chr16	108659	108969	(90229376)	C	AluSx3	SINE/Alu	(0)	311	1	1394183
1664	21.2	1.3	0.7	chr16	108970	109266	(90229079)	C	AluJr4	SINE/Alu	(13)	299	1	1394184
325	30.8	4.4	2.3	chr16	229684	229816	(90108529)	+	MIR	SINE/MIR	56	191	(71)	1394420
30	0.0	0.0	0.0	chr16	229827	229854	(90108491)	+	(TTTA)n	Simple_repeat	1	28	(0)	1394421
784	17.7	2.1	0.7	chr16	229860	230000	(90108345)	C	AluJb	SINE/Alu	(35)	277	135	1394422
1927	11.2	2.7	7.0	chr16	230190	230348	(90107997)	C	AluSg	SINE/Alu	(10)	300	137	1394423
21	4.2	7.1	6.7	chr16	680436	680491	(89657854)	+	G-rich	Low_complexity	1	60	(0)	1395074
14	14.3	0.0	3.0	chr16	680723	680755	(89657590)	+	G-rich	Low_complexity	1	33	(0)	1395075
2362	21.2	2.9	7.2	chr16	836402	836705	(89501640)	C	L1MD	LINE/L1	(1984)	4162	3852	1395268
2211	12.4	0.7	0.3	chr16	836706	837012	(89501333)	C	AluSq	SINE/Alu	(4)	309	2	1395269
293	19.4	4.0	0.0	chr16	1025186	1025257	(89313088)	C	MER2	DNA/TcMar-Tigger	(3)	342	268	1395420
2471	8.1	0.3	0.0	chr16	1611534	1611840	(88726505)	+	AluSz	SINE/Alu	2	309	(3)	1396169
672	0.0	0.0	0.0	chr16	3150674	3150746	(87187599)	+	tRNA-Arg-CGG	tRNA	1	73	(3)	1398597
2132	6.8	0.0	5.1	chr16	3151121	3151445	(87186900)	C	AluSp	SINE/Alu	(0)	313	2	1398598
13	19.0	5.0	3.2	chr16	3159415	3159439	(87178906)	+	(CTTC)n	Simple_repeat	1	24	(0)	1398616
102	4.7	2.9	1.4	chr16	3159440	3159578	(87178767)	+	(TCTT)n	Simple_repeat	1	143	(0)	1398617
1045	14.3	2.9	9.4	chr16	3185291	3185439	(87152906)	+	AluJb	SINE/Alu	141	286	(26)	1398683
13	0.0	0.0	0.0	chr16	3185442	3185458	(87152887)	+	(ATA)n	Simple_repeat	1	17	(0)	1398685
1152	17.8	1.9	0.0	chr16	3185468	3185675	(87152670)	+	MLT1B	LTR/ERVL-MaLR	179	390	(0)	1398686
2006	9.1	3.7	0.0	chr16	3192940	3193225	(87145120)	C	AluSz	SINE/Alu	(15)	297	1	1398701
809	15.3	6.9	9.4	chr16	3365889	3366112	(86972233)	+	MER20	DNA/hAT-Charlie	1	218	(1)	1399060
2341	8.4	0.0	2.2	chr16	3366186	3366496	(86971849)	C	AluY	SINE/Alu	(7)	304	1	1399061
21	15.3	6.7	1.6	chr16	4614800	4614859	(85723486)	+	(CGCCTCC)n	Simple_repeat	1	64	(0)	1401530
12	23.0	0.0	4.5	chr16	4614903	4614946	(85723399)	+	(CGCCT)n	Simple_repeat	1	44	(0)	1401531
252	10.8	0.0	0.0	chr16	4767412	4767448	(85570897)	C	MLT1D	LTR/ERVL-MaLR	(224)	281	245	1401813
1460	9.6	19.4	0.0	chr16	4767449	4767677	(85570668)	+	AluSp	SINE/Alu	3	286	(27)	1401814
19	26.5	0.0	5.1	chr16	5098644	5098722	(85239623)	+	G-rich	Low_complexity	1	79	(0)	1402557
423	31.8	10.6	4.4	chr16	5098950	5099153	(85239192)	C	L2c	LINE/L2	(3)	3423	3206	1402558
408	27.4	15.2	11.6	chr16	10338279	10338610	(79999735)	C	MER34A	LTR/ERV1	(159)	412	51	1413264
696	23.4	7.8	2.3	chr16	10338613	10338831	(79999514)	C	MLT1G1	LTR/ERVL-MaLR	(204)	375	144	1413267
2368	8.9	0.3	0.3	chr16	10338851	10339153	(79999192)	+	AluSc	SINE/Alu	1	303	(6)	1413268
1734	28.4	7.4	3.0	chr16	11309859	11310132	(79028213)	C	L1ME3	LINE/L1	(24)	6138	5834	1415375
1847	17.5	0.7	0.3	chr16	11310133	11310435	(79027910)	C	AluJb	SINE/Alu	(8)	304	1	1415376
2053	17.0	0.0	0.0	chr16	12758881	12759192	(77579153)	+	AluJo	SINE/Alu	1	312	(0)	1418559
450	27.0	6.2	2.8	chr16	12759337	12759477	(77578868)	C	MLT1N2	LTR/ERVL-MaLR	(298)	264	119	1418560
20	14.4	9.1	0.0	chr16	13289497	13289551	(77048794)	+	A-rich	Low_complexity	1	60	(0)	1419792
720	32.2	5.4	6.0	chr16	14502230	14502599	(75835746)	C	MamRep137	DNA/TcMar-Tigger	(47)	463	96	1422285
2310	10.3	0.0	1.3	chr16	15818422	15818732	(74519613)	C	AluY	SINE/Alu	(1)	310	4	1425296
1729	17.3	1.7	0.0	chr16	15818875	15819157	(74519188)	C	AluJr4	SINE/Alu	(7)	305	18	1425297
480	13.8	0.0	1.2	chr16	17241531	17241611	(73096734)	+	L1MB2	LINE/L1	6002	6081	(90)	1428645
357	23.5	0.0	2.9	chr16	18983688	18983792	(71354553)	C	L1PA17	LINE/L1	(1)	6165	6064	1432376
18	10.8	0.0	0.0	chr16	18983990	18984019	(71354326)	+	(GGC)n	Simple_repeat	1	30	(0)	1432377
954	30.4	6.7	1.4	chr16	19902672	19902967	(70435378)	C	L2a	LINE/L2	(208)	3218	2890	1434638
347	29.8	1.6	2.4	chr16	21182034	21182157	(69156188)	C	L2b	LINE/L2	(276)	3099	2977	1437361
3280	10.8	10.4	0.6	chr16	21182195	21182671	(69155674)	+	MER1A	DNA/hAT-Charlie	1	529	(0)	1437362
13	22.5	2.0	3.9	chr16	21278385	21278434	(69059911)	+	(CCCCG)n	Simple_repeat	1	51	(0)	1437565
14	21.5	2.2	2.2	chr16	22206227	22206271	(68132074)	+	(CGCCC)n	Simple_repeat	1	46	(0)	1439529
23	22.6	1.5	1.0	chr16	22436813	22436867	(67901478)	+	A-rich	Low_complexity	1	55	(0)	1440062
12	23.9	0.0	0.0	chr16	22437078	22437112	(67901233)	+	(CCTCCT)n	Simple_repeat	1	35	(0)	1440063
22	24.3	0.0	1.7	chr16	22437242	22437301	(67901044)	+	(TCC)n	Simple_repeat	1	60	(0)	1440064
13	18.2	2.6	2.5	chr16	23835736	23835774	(66502571)	+	G-rich	Low_complexity	1	40	(0)	1443258
358	17.4	12.2	1.1	chr16	25066638	25066724	(65271621)	+	LTR53-int	LTR/ERVL	1379	1476	(1853)	1446146
16	18.9	2.4	0.0	chr16	28212035	28212076	(62126269)	+	G-rich	Low_complexity	1	43	(0)	1452865
190	16.5	22.9	2.1	chr16	28212245	28212337	(62126008)	C	L2a	LINE/L2	(3)	3423	3306	1452866
190	27.1	11.4	0.0	chr16	28212334	28212403	(62125942)	C	L2b	LINE/L2	(0)	3375	3297	1452867
1194	19.1	16.9	0.4	chr16	28212503	28212753	(62125592)	C	AluJo	SINE/Alu	(10)	302	2	1452868
705	26.9	4.4	0.0	chr16	28303994	28304209	(62034136)	+	L1ME4b	LINE/L1	315	540	(352)	1453146
586	21.0	12.7	1.1	chr16	28304396	28304576	(62033769)	+	MIRb	SINE/MIR	20	225	(43)	1453147
2636	4.8	0.0	0.3	chr16	28304596	28304906	(62033439)	C	AluY	SINE/Alu	(0)	311	2	1453148
13	11.7	3.6	0.0	chr16	28950961	28950988	(61387357)	+	(GGCGA)n	Simple_repeat	1	29	(0)	1454833
41	4.5	0.0	0.0	chr16	29595078	29595123	(60743222)	+	(GAG)n	Simple_repeat	1	46	(0)	1456054
13	23.9	0.0	0.0	chr16	29595282	29595316	(60743029)	+	GA-rich	Low_complexity	1	35	(0)	1456055
944	19.1	1.8	0.0	chr16	29877047	29877208	(60461137)	C	AluJr	SINE/Alu	(11)	301	137	1456766
1910	13.9	0.0	4.6	chr16	30018006	30018307	(60320038)	+	AluJb	SINE/Alu	23	310	(2)	1457081
365	29.8	8.1	6.4	chr16	30018310	30018322	(60320023)	C	L2c	LINE/L2	(792)	2627	2613	1457077
807	24.1	1.8	0.0	chr16	30018323	30018484	(60319861)	C	FRAM	SINE/Alu	(11)	165	1	1457082
365	29.8	8.1	6.4	chr16	30018485	30018689	(60319656)	C	L2c	LINE/L2	(807)	2612	2406	1457077
228	28.7	1.8	6.9	chr16	30018704	30018819	(60319526)	C	L2-1_AMi	LINE/L2	(812)	423	314	1457083
415	30.1	2.2	6.4	chr16	30018901	30019035	(60319310)	C	L2c	LINE/L2	(1349)	2070	1936	1457077
372	32.3	5.1	0.0	chr16	30096558	30096687	(60241658)	C	MIR	SINE/MIR	(70)	192	56	1457252
1422	20.6	1.7	1.6	chr16	30096876	30097207	(60241138)	+	LTR10B2	LTR/ERV1	187	503	(0)	1457253
24	20.8	0.0	1.8	chr16	30335132	30335188	(60003157)	+	GA-rich	Low_complexity	1	57	(0)	1457788
16	19.9	0.0	0.0	chr16	30335313	30335347	(60002998)	+	GA-rich	Low_complexity	1	35	(0)	1457789
23	9.1	0.0	0.0	chr16	30814728	30814763	(59523582)	+	(TTCC)n	Simple_repeat	1	36	(0)	1458925
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
888	6.7	4.2	0.7	chr16	33340034	33340155	(56998190)	C	LTR13A	LTR/ERVK	(840)	126	1	1462584
376	15.6	3.0	0.0	chr16	34097527	34097590	(56240755)	C	AluJo	SINE/Alu	(22)	290	225	1463604
1170	25.7	8.2	2.4	chr16	46873330	46873664	(43464681)	+	MER21C	LTR/ERVL	440	795	(143)	1466217
277	26.8	1.2	11.8	chr16	46873665	46873691	(43464654)	+	MIR3	SINE/MIR	61	80	(128)	1466218
28	0.0	0.0	0.0	chr16	46873692	46873718	(43464627)	+	(T)n	Simple_repeat	1	27	(0)	1466219
1526	16.2	6.7	0.8	chr16	46873719	46873971	(43464374)	C	AluJb	SINE/Alu	(43)	269	1	1466220
608	30.5	1.8	0.0	chr16	46873972	46874135	(43464210)	+	MIRb	SINE/MIR	85	251	(17)	1466221
13	0.0	4.3	4.2	chr16	48244640	48244662	(42093683)	+	(GCG)n	Simple_repeat	1	24	(0)	1468423
1894	12.8	5.7	0.0	chr16	49876995	49877157	(40461188)	C	AluJo	SINE/Alu	(13)	299	137	1471286
42	3.2	4.5	2.9	chr16	49877158	49877224	(40461121)	+	(GTTT)n	Simple_repeat	1	70	(0)	1471287
13	18.1	2.0	6.0	chr16	50742150	50742198	(39596147)	+	G-rich	Low_complexity	1	50	(0)	1473097
214	6.2	3.0	0.0	chr16	50742554	50742585	(39595760)	C	MIR1_Amn	SINE/MIR	(79)	151	119	1473098
726	29.8	8.4	7.9	chr16	54620904	54621421	(35716924)	C	Charlie8	DNA/hAT-Charlie	(1907)	521	1	1479857
1874	13.5	1.0	3.1	chr16	57483349	57483666	(32854679)	+	AluJr	SINE/Alu	1	311	(1)	1485148
21	20.2	0.0	4.8	chr16	58025806	58025867	(32312478)	+	(CGCT)n	Simple_repeat	1	62	(0)	1486285
12	18.8	2.6	2.6	chr16	58129651	58129688	(32208657)	+	(ACGTG)n	Simple_repeat	1	39	(0)	1486505
371	24.1	0.0	0.0	chr16	58129891	58129973	(32208372)	+	L1M5	LINE/L1	2968	3050	(3096)	1486506
13	10.7	6.7	0.0	chr16	67521560	67521589	(22816756)	+	GA-rich	Low_complexity	1	32	(0)	1501808
80	4.8	0.0	0.0	chr16	67842863	67842950	(22495395)	+	(GCA)n	Simple_repeat	1	88	(0)	1502468
19	12.9	0.0	2.7	chr16	68085612	68085648	(22252697)	+	(GCC)n	Simple_repeat	1	37	(0)	1502902
11	24.2	5.5	1.7	chr16	68085649	68085665	(22252680)	+	(AGCTGC)n	Simple_repeat	2	58	(0)	1502903
19	15.8	2.8	0.0	chr16	68085887	68085922	(22252423)	+	(TG)n	Simple_repeat	1	37	(0)	1502904
18	20.6	1.9	3.6	chr16	68264487	68264540	(22073805)	+	(CGG)n	Simple_repeat	1	55	(0)	1503253
13	14.0	4.7	4.4	chr16	69565635	69565677	(20772668)	+	(CTCTG)n	Simple_repeat	1	45	(0)	1506104
1783	18.1	3.0	1.7	chr16	69904373	69904670	(20433675)	C	AluJr4	SINE/Alu	(10)	302	1	1506847
16	17.3	8.1	3.0	chr16	70251620	70251681	(20086664)	+	(CCG)n	Simple_repeat	1	67	(0)	1507543
2502	11.2	1.6	0.3	chr16	71229826	71230184	(19108161)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1509296
2009	21.3	7.5	2.8	chr16	71230185	71230244	(19108101)	+	L1ME1	LINE/L1	6077	6138	(41)	1509286
27	19.7	0.0	0.0	chr16	71529077	71529134	(18809211)	+	(T)n	Simple_repeat	1	58	(0)	1509855
206	31.6	1.3	0.0	chr16	71529295	71529370	(18808975)	C	MamSINE1	SINE/tRNA-RTE	(197)	93	17	1509856
358	15.4	0.0	0.0	chr16	71529544	71529626	(18808719)	C	AluYg6	SINE/Alu	(0)	311	230	1509857
23	21.6	0.0	0.0	chr16	71723696	71723749	(18614596)	+	(CTCG)n	Simple_repeat	1	54	(0)	1510238
8060	8.1	1.9	0.6	chr16	73934142	73936143	(16402202)	+	L1PA11	LINE/L1	4142	6162	(12)	1513751
2348	8.8	0.7	0.0	chr16	74726391	74726685	(15611660)	C	AluSq2	SINE/Alu	(15)	298	2	1515318
1675	15.2	2.4	4.0	chr16	75348871	75349167	(14989178)	C	AluJr	SINE/Alu	(18)	294	3	1516589
715	15.8	8.6	7.3	chr16	75349168	75349224	(14989121)	C	L1M4	LINE/L1	(1775)	4371	4323	1516588
2148	12.0	1.3	0.7	chr16	75349229	75349528	(14988817)	+	AluSx1	SINE/Alu	1	302	(10)	1516590
923	16.4	2.0	0.0	chr16	75349535	75349680	(14988665)	+	AluJb	SINE/Alu	164	312	(0)	1516591
1950	17.4	2.1	0.0	chr16	75349709	75350076	(14988269)	C	L1M4	LINE/L1	(1816)	4330	3955	1516588
304	30.2	7.8	0.2	chr16	77310406	77310537	(13027808)	C	MIR3	SINE/MIR	(82)	148	3	1519604
1637	17.3	1.8	0.4	chr16	77310631	77310901	(13027444)	C	AluJb	SINE/Alu	(11)	301	27	1519605
1239	27.6	9.8	5.0	chr16	77609380	77609790	(12728555)	C	HAL1ME	LINE/L1	(1339)	1126	683	1520138
2294	22.0	3.6	5.6	chr16	77610052	77610673	(12727672)	+	L1MD2	LINE/L1	5741	6349	(10)	1520140
1768	17.1	2.0	0.0	chr16	81330928	81331214	(9007131)	+	AluJo	SINE/Alu	4	296	(16)	1527063
3170	23.0	19.4	1.6	chr16	81331215	81331547	(9006798)	+	L1MC4a	LINE/L1	7490	7882	(0)	1527062
326	18.8	2.0	1.0	chr16	83967365	83968058	(6370287)	+	(GGAT)n	Simple_repeat	1	708	(0)	1531949
230	21.9	2.4	1.2	chr16	85400250	85400915	(4937430)	+	(TG)n	Simple_repeat	1	674	(0)	1534780
2369	10.7	0.0	0.0	chr16	85800615	85800923	(4537422)	C	AluSq	SINE/Alu	(4)	309	1	1535470
1112	26.4	8.9	9.0	chr16	86975421	86975929	(3362416)	+	MLT1J	LTR/ERVL-MaLR	5	512	(0)	1537576
15	22.5	0.0	2.3	chr16	89720846	89720888	(617457)	+	(CGG)n	Simple_repeat	1	43	(0)	1541725
12	30.4	1.2	5.8	chr16	89721182	89721266	(617079)	+	(CCCCCGC)n	Simple_repeat	1	86	(0)	1541726
471	28.1	11.4	3.2	chr16	89818209	89818546	(519799)	+	L1MEf	LINE/L1	1450	1818	(4842)	1541912
1302	11.7	0.5	11.7	chr16	89818548	89818649	(519696)	+	AluJb	SINE/Alu	85	166	(146)	1541913
7723	5.6	2.2	0.0	chr16	89818650	89819594	(518751)	+	LTR13A	LTR/ERVK	1	966	(0)	1541914
294	30.3	5.9	13.1	chr17	875330	875526	(82381915)	C	MIRb	SINE/MIR	(64)	204	16	1545944
1507	17.4	2.4	2.4	chr17	875599	875885	(82381556)	C	AluJr	SINE/Alu	(14)	298	12	1545946
33	0.0	0.0	0.0	chr17	1400607	1400637	(81856804)	+	(TTTTCTT)n	Simple_repeat	1	31	(0)	1547031
2107	8.5	1.4	0.7	chr17	1400638	1400918	(81856523)	C	AluSq	SINE/Alu	(30)	283	1	1547032
2556	1.8	0.0	0.0	chr17	2352763	2353076	(80904365)	C	AluY	SINE/Alu	(0)	311	1	1548965
15	29.9	4.1	0.0	chr17	2399596	2399668	(80857773)	+	(GGCCCG)n	Simple_repeat	1	76	(0)	1549021
2430	8.1	0.7	0.0	chr17	2828059	2828366	(80429075)	+	AluSz	SINE/Alu	1	310	(2)	1550049
271	26.1	5.1	5.1	chr17	2828430	2828546	(80428895)	C	L2a	LINE/L2	(284)	3142	3026	1550047
2383	7.7	1.0	0.3	chr17	2828985	2829283	(80428158)	C	AluSx1	SINE/Alu	(11)	301	1	1550050
15916	9.5	1.4	1.7	chr17	3367216	3369805	(79887636)	C	L1PB1	LINE/L1	(2)	6865	4290	1550919
2127	19.5	9.9	3.4	chr17	5190695	5191220	(78066221)	+	LTR6A	LTR/ERV1	1	564	(0)	1554576
19	17.3	2.1	2.0	chr17	6444058	6444105	(76813336)	+	G-rich	Low_complexity	1	49	(0)	1557110
18	10.4	0.0	0.0	chr17	6444345	6444375	(76813066)	+	(GGGGCG)n	Simple_repeat	1	31	(0)	1557111
2113	13.8	0.3	0.0	chr17	8425301	8425597	(74831844)	+	AluJb	SINE/Alu	1	298	(14)	1560807
320	27.2	6.9	0.0	chr17	8425610	8425690	(74831751)	C	L2c	LINE/L2	(1)	3386	3300	1560808
352	26.7	7.7	12.0	chr17	8425723	8425783	(74831658)	+	L2a	LINE/L2	3213	3267	(159)	1560809
1582	21.6	1.0	0.3	chr17	8425784	8426089	(74831352)	C	AluJr	SINE/Alu	(4)	308	1	1560810
352	26.7	7.7	12.0	chr17	8426090	8426244	(74831197)	+	L2a	LINE/L2	3268	3419	(7)	1560809
21	19.3	0.0	2.0	chr17	8631710	8631759	(74625682)	+	(TTCA)n	Simple_repeat	1	50	(0)	1561113
15	22.7	2.2	0.0	chr17	8827100	8827175	(74430266)	+	(CTCCCCT)n	Simple_repeat	1	77	(0)	1561543
13	15.6	3.4	8.2	chr17	10198453	10198511	(73058930)	+	(CGGCGCC)n	Simple_repeat	1	61	(0)	1564239
33	2.9	0.0	0.0	chr17	10198741	10198775	(73058666)	+	(GGCCGG)n	Simple_repeat	1	35	(0)	1564240
18	30.0	1.1	4.3	chr17	10198847	10198938	(73058503)	+	(GGCG)n	Simple_repeat	1	93	(0)	1564241
21	14.5	0.0	0.0	chr17	12020906	12020943	(71236498)	+	(GCG)n	Simple_repeat	1	38	(0)	1567443
16	21.6	1.7	5.0	chr17	12021285	12021343	(71236098)	+	(CCGCCC)n	Simple_repeat	1	60	(0)	1567444
12	9.7	0.0	0.0	chr17	12789487	12789508	(70467933)	+	(GCCA)n	Simple_repeat	1	22	(0)	1568663
17	19.8	1.7	6.6	chr17	12789616	12789675	(70467766)	+	(GCG)n	Simple_repeat	1	61	(0)	1568664
1616	17.5	12.6	0.0	chr17	13228228	13228559	(70028882)	C	MER57B2	LTR/ERV1	(9)	394	15	1569427
386	34.1	7.7	3.3	chr17	13417222	13417433	(69840008)	C	MIRb	SINE/MIR	(29)	239	18	1569760
26	0.0	0.0	0.0	chr17	14332830	14332854	(68924587)	+	(T)n	Simple_repeat	1	25	(0)	1571243
301	15.5	5.3	1.4	chr17	14932582	14932653	(68324788)	+	LTR104_Mam	LTR/Gypsy	317	391	(1118)	1572246
420	37.6	4.9	1.7	chr17	14932745	14933158	(68324283)	+	HERV16-int	LTR/ERVL	173	600	(4396)	1572247
434	24.7	3.0	1.8	chr17	15567386	15567550	(67689891)	C	L1ME3G	LINE/L1	(280)	644	478	1573290
835	15.4	0.0	0.0	chr17	15567585	15567707	(67689734)	+	AluJr4	SINE/Alu	174	296	(16)	1573291
13	24.6	2.9	5.6	chr17	15704981	15705050	(67552391)	+	(GCTGCC)n	Simple_repeat	1	72	(0)	1573529
574	26.0	4.8	1.0	chr17	15705140	15705341	(67552100)	C	L1MC4a	LINE/L1	(11)	7871	7662	1573530
15	19.9	0.0	4.5	chr17	16215481	16215524	(67041917)	+	(GCC)n	Simple_repeat	1	44	(0)	1574432
2146	11.2	1.0	0.0	chr17	16216219	16216513	(67040928)	+	AluSz	SINE/Alu	1	298	(14)	1574433
1500	10.7	1.4	0.0	chr17	16588729	16588934	(66668507)	C	AluSz6	SINE/Alu	(15)	297	89	1575258
1057	9.0	0.0	0.0	chr17	16589595	16589727	(66667714)	C	AluSq10	SINE/Alu	(180)	133	1	1575259
551	26.1	24.1	0.0	chr17	17281616	17281799	(65975642)	+	MIR	SINE/MIR	29	256	(6)	1576335
315	27.3	10.1	2.0	chr17	17676033	17676178	(65581263)	+	MIR3	SINE/MIR	4	162	(46)	1577133
481	26.5	8.9	2.9	chr17	19647784	19648024	(63609417)	C	L2a	LINE/L2	(1123)	2296	2040	1581017
13	17.4	0.0	2.9	chr17	19648298	19648331	(63609110)	+	GA-rich	Low_complexity	1	34	(0)	1581022
218	24.1	2.7	0.0	chr17	20157038	20157120	(63100321)	C	MIR3	SINE/MIR	(47)	183	91	1582054
17	0.0	0.0	0.0	chr17	20852386	20852404	(62405037)	+	(A)n	Simple_repeat	1	19	(0)	1583232
2332	10.8	0.0	0.0	chr17	20908013	20908299	(62349142)	+	AluSg	SINE/Alu	7	293	(17)	1583314
470	22.7	0.9	0.9	chr17	20908916	20909026	(62348415)	+	MER125	DNA	4	114	(62)	1583315
1754	13.4	1.1	0.0	chr17	21547627	21547887	(61709554)	C	AluJb	SINE/Alu	(36)	276	13	1584436
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
1545	18.6	0.5	0.9	chr17	26938538	26939277	(56318164)	+	(GAATG)n	Satellite	3	736	(0)	1585994
437	12.7	3.1	0.0	chr17	26939289	26939351	(56318090)	+	AluSz6	SINE/Alu	225	289	(23)	1585995
1545	18.6	0.5	0.9	chr17	26939351	26939821	(56317620)	+	(GAATG)n	Satellite	4	474	(0)	1585996
1906	10.1	6.3	0.0	chr17	27348730	27348997	(55908444)	C	AluSx	SINE/Alu	(26)	286	1	1586589
558	19.4	18.7	0.0	chr17	27349026	27349273	(55908168)	+	MER52D	LTR/ERV1	10	314	(1809)	1586590
859	22.2	3.4	0.7	chr17	27349583	27349897	(55907544)	+	MER52D	LTR/ERV1	471	835	(1288)	1586590
300	34.9	0.0	2.7	chr17	27530964	27531075	(55726366)	C	L1ME4a	LINE/L1	(343)	5780	5672	1586985
1556	12.0	1.8	0.5	chr17	28039998	28040214	(55217227)	+	AluJb	SINE/Alu	86	305	(7)	1587974
180	24.2	1.6	6.1	chr17	28040225	28040290	(55217151)	C	L2a	LINE/L2	(808)	2611	2549	1587972
1789	15.7	1.7	2.4	chr17	28040445	28040738	(55216703)	+	AluJo	SINE/Alu	1	292	(20)	1587975
354	29.7	3.3	4.6	chr17	28071842	28071993	(55185448)	C	L1MCc	LINE/L1	(6146)	277	128	1588034
2409	11.1	0.0	0.0	chr17	30106469	30106756	(53150685)	C	AluSx1	SINE/Alu	(24)	288	1	1591939
1103	12.9	0.0	0.0	chr17	30106814	30106952	(53150489)	+	AluJb	SINE/Alu	156	294	(18)	1591940
16	16.5	3.8	5.5	chr17	31008692	31008744	(52248697)	+	(CCG)n	Simple_repeat	1	55	(0)	1593821
1465	15.4	0.5	0.0	chr17	31824252	31824472	(51432969)	C	AluJb	SINE/Alu	(4)	308	87	1595400
1304	17.8	4.7	0.4	chr17	31828700	31828964	(51428477)	+	L1MC3	LINE/L1	7465	7741	(44)	1595408
1936	15.6	2.7	0.0	chr17	31828982	31829270	(51428171)	C	AluJo	SINE/Alu	(14)	298	2	1595411
1331	12.0	0.0	1.1	chr17	32342654	32342828	(50914613)	+	AluSz	SINE/Alu	1	173	(139)	1596599
993	4.0	0.0	0.0	chr17	32822870	32822994	(50434447)	+	L1PA5	LINE/L1	6030	6154	(0)	1597471
2262	12.9	1.3	0.3	chr17	37316791	37317093	(45940348)	+	AluJb	SINE/Alu	1	306	(6)	1605575
290	28.1	7.4	4.2	chr17	37317101	37317307	(45940134)	+	L1ME4a	LINE/L1	5844	6060	(64)	1605576
36	19.3	3.9	5.2	chr17	38705133	38705262	(44552179)	+	(GGCG)n	Simple_repeat	1	135	(0)	1608410
1194	18.9	10.7	1.6	chr17	39335859	39336112	(43921329)	+	AluJr	SINE/Alu	1	280	(32)	1609825
2244	7.4	0.0	0.7	chr17	39573071	39573354	(43684087)	+	AluSx1	SINE/Alu	1	282	(30)	1610385
29	0.0	0.0	0.0	chr17	39573355	39573382	(43684059)	+	(AAAAT)n	Simple_repeat	1	28	(0)	1610386
28	0.0	0.0	0.0	chr17	39573626	39573651	(43683790)	+	(CGC)n	Simple_repeat	1	26	(0)	1610387
10665	10.5	2.7	3.8	chr17	39822921	39824517	(43432924)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(0)	1610835
12	12.0	3.3	3.2	chr17	41688405	41688434	(41569007)	+	(GTAG)n	Simple_repeat	1	31	(0)	1614054
13	5.3	0.0	0.0	chr17	41688978	41688997	(41568444)	+	(CCG)n	Simple_repeat	1	20	(0)	1614055
13	16.1	0.0	0.0	chr17	41917645	41917672	(41339769)	+	(TATT)n	Simple_repeat	1	28	(0)	1614561
17	13.2	0.0	0.0	chr17	42536275	42536307	(40721134)	+	(GGTGGC)n	Simple_repeat	1	33	(0)	1615844
18	19.8	6.0	2.8	chr17	42536474	42536540	(40720901)	+	(GGC)n	Simple_repeat	1	71	(0)	1615845
345	27.9	0.0	4.1	chr17	42682162	42682258	(40575183)	+	MIRb	SINE/MIR	81	173	(95)	1616145
38	21.3	9.5	0.6	chr17	42682577	42682724	(40574717)	+	GA-rich	Low_complexity	1	162	(0)	1616146
618	18.8	17.7	0.0	chr17	42744395	42744538	(40512903)	C	MER96	DNA/hAT-Tip100	(0)	175	1	1616275
13	27.5	1.9	1.8	chr17	42744733	42744786	(40512655)	+	(CCCCGC)n	Simple_repeat	1	55	(0)	1616276
19	28.9	5.4	0.0	chr17	42833431	42833522	(40423919)	+	(GCGA)n	Simple_repeat	1	97	(0)	1616449
875	26.1	9.6	7.0	chr17	42889170	42889326	(40368115)	C	MLT1H	LTR/ERVL-MaLR	(371)	178	25	1616553
299	37.4	9.9	1.1	chr17	42889565	42889748	(40367693)	C	L2c	LINE/L2	(269)	3118	2917	1616555
7985	10.8	0.6	4.6	chr17	43319366	43320150	(39937291)	C	THE1B-int	LTR/ERVL-MaLR	(298)	1282	501	1617594
2112	11.8	0.0	0.0	chr17	43320151	43320454	(39936987)	C	AluSc	SINE/Alu	(0)	309	1	1617597
371	30.8	10.1	2.4	chr17	43368998	43369416	(39888025)	C	L2	LINE/L2	(422)	2997	2543	1617637
377	9.8	0.0	3.3	chr17	43369417	43369477	(39887964)	+	AluSq	SINE/Alu	240	298	(15)	1617638
2251	10.6	0.0	0.7	chr17	43369482	43369774	(39887667)	+	AluSx1	SINE/Alu	2	292	(20)	1617639
1945	6.1	0.3	17.5	chr17	43388090	43388255	(39869186)	+	AluSc8	SINE/Alu	145	299	(12)	1617684
20	14.2	0.0	0.0	chr17	43484225	43484233	(39773208)	+	(GAGGAAG)n	Simple_repeat	1	36	(0)	1617945
12	3.9	11.1	0.0	chr17	43484234	43484260	(39773181)	+	(GGAA)n	Simple_repeat	1	30	(0)	1617946
12	12.0	3.7	0.0	chr17	43484418	43484444	(39772997)	+	(TGTT)n	Simple_repeat	1	28	(0)	1617947
360	31.2	1.0	0.0	chr17	43484506	43484601	(39772840)	C	MIRb	SINE/MIR	(9)	259	163	1617948
2071	12.3	0.0	0.3	chr17	43484654	43484938	(39772503)	C	AluJb	SINE/Alu	(24)	288	5	1617949
2534	6.7	0.0	0.3	chr17	43785425	43785722	(39471719)	C	AluSg4	SINE/Alu	(13)	297	1	1618601
2224	16.4	7.9	6.5	chr17	43785723	43785938	(39471503)	C	MER66B	LTR/ERV1	(281)	205	1	1618600
2019	17.1	1.6	6.4	chr17	43785939	43786297	(39471144)	C	Ricksha_c	DNA/MULE-MuDR	(1285)	763	417	1618599
408	0.0	0.0	0.0	chr17	43851641	43851714	(39405727)	C	AluY	SINE/Alu	(0)	301	234	1618729
806	6.9	1.0	0.0	chr17	43851715	43851816	(39405625)	C	AluY	SINE/Alu	(170)	141	39	1618729
542	32.7	10.2	1.9	chr17	43851829	43852194	(39405247)	C	L2c	LINE/L2	(80)	3307	2925	1618730
25	15.9	0.0	0.0	chr17	44070448	44070489	(39186952)	+	(T)n	Simple_repeat	1	42	(0)	1619180
27	0.0	0.0	5.7	chr17	44220905	44220939	(39036502)	+	(CCGC)n	Simple_repeat	1	35	(0)	1619467
383	36.0	2.9	6.0	chr17	44458511	44458529	(38798912)	C	L1M5	LINE/L1	(995)	5151	5134	1619981
1875	14.9	1.7	2.4	chr17	44458530	44458825	(38798616)	C	AluJr4	SINE/Alu	(18)	294	1	1619982
338	34.3	4.5	5.4	chr17	45099655	45099876	(38157565)	+	Tigger19a	DNA/TcMar-Tigger	26	245	(78)	1621362
17	12.4	2.7	2.6	chr17	46193329	46193365	(37064076)	+	(CGG)n	Simple_repeat	1	38	(0)	1623547
15	8.7	0.0	0.0	chr17	46193431	46193455	(37063986)	+	(GAGC)n	Simple_repeat	1	25	(0)	1623548
653	24.6	18.1	0.0	chr17	46967203	46967405	(36290036)	+	MIR	SINE/MIR	15	262	(0)	1625062
14	17.6	0.0	0.0	chr17	47253758	47253789	(36003652)	+	(CCCTC)n	Simple_repeat	1	32	(0)	1625666
21	5.5	5.0	2.4	chr17	47254456	47254495	(36002946)	+	(TTTTTTC)n	Simple_repeat	1	42	(0)	1625667
214	19.0	0.0	2.3	chr17	47323260	47323302	(35934139)	C	MIRc	SINE/MIR	(132)	136	95	1625796
394	27.1	1.6	0.0	chr17	47649133	47649257	(35608184)	+	MIR3	SINE/MIR	61	182	(26)	1626487
4725	17.4	3.4	1.9	chr17	47764989	47765650	(35491791)	C	L1MDa	LINE/L1	(4376)	2257	1582	1626684
1706	15.4	2.5	1.5	chr17	47765651	47765923	(35491518)	C	AluSz	SINE/Alu	(16)	296	21	1626694
509	21.8	1.0	1.0	chr17	47765924	47766024	(35491417)	C	AluJb	SINE/Alu	(211)	101	1	1626695
18	0.0	0.0	0.0	chr17	47766032	47766054	(35491387)	+	(TTTC)n	Simple_repeat	1	23	(0)	1626696
2479	8.4	0.0	0.0	chr17	47771764	47772061	(35485380)	C	AluSg	SINE/Alu	(12)	298	1	1626709
467	21.7	44.4	3.4	chr17	47772062	47772203	(35485238)	C	MLT1J	LTR/ERVL-MaLR	(237)	275	75	1626708
2074	15.3	0.3	1.6	chr17	47772204	47772510	(35484931)	C	AluJb	SINE/Alu	(9)	303	1	1626710
16	20.9	1.1	10.1	chr17	48625316	48625427	(34632014)	+	(CCGGCCC)n	Simple_repeat	1	101	(0)	1628155
658	2.7	0.0	0.0	chr17	49192528	49192600	(34064841)	+	tRNA-Gln-CAA	tRNA	1	73	(2)	1629400
2444	9.0	0.0	0.0	chr17	49879993	49880303	(33377138)	C	AluSz	SINE/Alu	(0)	312	2	1630746
14	26.8	0.0	3.5	chr17	50184326	50184382	(33073059)	+	(CAGAGGC)n	Simple_repeat	1	57	(0)	1631296
22	19.4	0.0	0.0	chr17	50184476	50184516	(33072925)	+	A-rich	Low_complexity	1	41	(0)	1631297
186	31.6	10.6	0.0	chr17	50478547	50478622	(32778819)	+	L2b	LINE/L2	3290	3374	(1)	1631862
13	22.1	2.3	2.2	chr17	50478731	50478775	(32778666)	+	G-rich	Low_complexity	1	45	(0)	1631863
17	14.0	0.0	0.0	chr17	50479052	50479083	(32778358)	+	(GTGGCC)n	Simple_repeat	1	32	(0)	1631864
16	20.5	1.4	0.0	chr17	50865473	50865518	(32391923)	+	GA-rich	Low_complexity	1	46	(0)	1632609
15	28.4	1.6	1.6	chr17	50865613	50865673	(32391768)	+	(GCCCC)n	Simple_repeat	1	62	(0)	1632610
228	21.1	0.0	7.1	chr17	51154462	51154517	(32102924)	+	MIR3	SINE/MIR	130	181	(27)	1633252
270	19.1	3.1	3.1	chr17	51154677	51154741	(32102700)	+	MIR3	SINE/MIR	112	176	(32)	1633253
12	21.0	5.9	1.9	chr17	51166774	51166824	(32090617)	+	(CGCGCC)n	Simple_repeat	1	54	(0)	1633282
18	14.9	0.0	2.6	chr17	56593716	56593754	(26663687)	+	(CGC)n	Simple_repeat	1	39	(0)	1641537
888	24.4	7.3	5.7	chr17	56877403	56877750	(26379691)	+	MLT1L	LTR/ERVL-MaLR	112	549	(61)	1642154
1046	16.8	3.0	0.0	chr17	56877751	56877911	(26379530)	C	AluJr	SINE/Alu	(10)	302	137	1642158
14	31.4	2.1	4.2	chr17	57085116	57085208	(26172233)	+	G-rich	Low_complexity	1	95	(0)	1642628
39	9.5	0.0	0.0	chr17	58756097	58756154	(24501287)	+	(GAACCC)n	Simple_repeat	1	58	(0)	1645698
25	27.6	0.0	0.0	chr17	58756225	58756298	(24501143)	+	GA-rich	Low_complexity	1	74	(0)	1645699
17	29.8	2.5	1.2	chr17	58756310	58756388	(24501053)	+	(GCCGCC)n	Simple_repeat	1	81	(0)	1645700
14	24.1	0.0	0.0	chr17	58756637	58756675	(24500766)	+	(CCCGCC)n	Simple_repeat	1	39	(0)	1645701
1588	15.2	0.4	8.6	chr17	59003805	59004106	(24253335)	+	AluJr	SINE/Alu	2	278	(34)	1646203
12	11.3	6.9	0.0	chr17	59004115	59004143	(24253298)	+	GA-rich	Low_complexity	1	31	(0)	1646204
1904	16.9	0.0	1.0	chr17	59291935	59292235	(23965206)	C	AluJr	SINE/Alu	(14)	298	1	1646918
1251	15.0	1.7	16.7	chr17	59637582	59637928	(23619513)	+	AluJb	SINE/Alu	2	295	(17)	1647679
1022	19.1	1.8	0.0	chr17	59759978	59760145	(23497296)	+	AluJb	SINE/Alu	135	305	(7)	1647889
325	31.9	0.6	3.0	chr17	59760146	59760310	(23497131)	C	L1MEc	LINE/L1	(4260)	2140	1980	1647883
808	21.4	3.7	0.6	chr17	59774273	59774431	(23483010)	+	AluJo	SINE/Alu	139	302	(10)	1647916
11	10.8	0.0	10.5	chr17	59774601	59774638	(23482803)	+	(AGTAAT)n	Simple_repeat	1	38	(0)	1647917
2117	9.2	5.5	0.0	chr17	60150391	60150685	(23106756)	+	AluSx	SINE/Alu	1	312	(0)	1648679
324	20.4	0.0	0.0	chr17	60813355	60813408	(22444033)	C	AluSc	SINE/Alu	(133)	176	123	1650097
4333	15.5	6.7	3.6	chr17	60813414	60814269	(22443172)	C	L1P4	LINE/L1	(790)	5356	4408	1650098
16346	15.7	2.2	1.9	chr17	60962531	60963555	(22293886)	C	L1MA4	LINE/L1	(782)	6780	5749	1650326
20	10.0	0.0	0.0	chr17	64129987	64130018	(19127423)	+	(GCA)n	Simple_repeat	1	32	(0)	1655959
11	10.5	0.0	10.5	chr17	64262874	64262911	(18994530)	+	G-rich	Low_complexity	1	38	(0)	1656173
26	17.3	4.2	6.1	chr17	64263250	64263344	(18994097)	+	(GCC)n	Simple_repeat	1	99	(0)	1656174
184	23.9	11.8	1.5	chr17	65601366	65601433	(17656008)	+	OldhAT1	DNA/hAT-Ac	981	1056	(1792)	1658973
7081	16.8	2.4	0.7	chr17	66103553	66104721	(17152720)	+	L1MA3	LINE/L1	6	1194	(6371)	1659702
17	28.0	1.4	4.0	chr17	67377442	67377515	(15879926)	+	(GGC)n	Simple_repeat	1	75	(0)	1661911
487	11.8	0.0	0.0	chr17	68019900	68019967	(15237474)	C	tRNA-Arg-AGG	tRNA	(6)	70	3	1663342
443	28.6	5.2	1.2	chr17	68020281	68020446	(15236995)	C	MER5B	DNA/hAT-Charlie	(5)	173	1	1663343
321	28.1	0.0	2.4	chr17	68320489	68320572	(14936869)	C	L2a	LINE/L2	(45)	3381	3300	1663969
4479	24.2	7.9	8.0	chr17	69663073	69663842	(13593599)	+	L1MEf	LINE/L1	233	924	(5318)	1666150
1789	16.2	2.1	0.0	chr17	69663843	69664120	(13593321)	+	AluJb	SINE/Alu	24	307	(5)	1666151
4479	24.0	8.0	7.3	chr17	69664121	69665409	(13592032)	+	L1MEf	LINE/L1	925	2289	(3857)	1666150
1213	28.9	6.1	0.5	chr17	69860346	69860731	(13396710)	C	L1MEg2	LINE/L1	(6034)	418	10	1666423
527	36.6	7.8	2.2	chr17	70840429	70840943	(12416498)	C	L2a	LINE/L2	(5)	3421	2883	1667886
16	12.8	2.9	0.0	chr17	72592852	72592885	(10664556)	+	G-rich	Low_complexity	1	35	(0)	1670654
32	5.2	0.0	0.0	chr17	72936403	72936442	(10320999)	+	(A)n	Simple_repeat	1	40	(0)	1671278
2142	16.8	0.0	1.7	chr17	72936678	72937022	(10320419)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	1671279
1816	15.1	0.7	4.5	chr17	74438016	74438206	(8819235)	C	AluJb	SINE/Alu	(0)	312	139	1674163
54	0.0	0.0	0.0	chr17	74438207	74438252	(8819189)	+	(AT)n	Simple_repeat	1	46	(0)	1674164
2172	16.6	3.5	3.3	chr17	74515831	74516380	(8741061)	C	MLT2A2	LTR/ERVL	(0)	554	3	1674302
2350	10.7	0.3	0.0	chr17	75070286	75070594	(8186847)	+	AluSx1	SINE/Alu	1	310	(2)	1675279
869	21.7	0.0	10.4	chr17	75070599	75070842	(8186599)	+	AluJb	SINE/Alu	1	218	(94)	1675280
27	0.0	0.0	0.0	chr17	75070843	75070868	(8186573)	+	(GCTT)n	Simple_repeat	1	26	(0)	1675281
12	6.2	4.9	9.3	chr17	75878098	75878138	(7379303)	+	(AGGC)n	Simple_repeat	1	43	(0)	1676937
28	16.6	1.2	7.0	chr17	75878221	75878305	(7379136)	+	G-rich	Low_complexity	1	86	(0)	1676938
20	18.1	3.3	3.2	chr17	75878650	75878709	(7378732)	+	(CCGC)n	Simple_repeat	1	62	(0)	1676939
19	26.7	0.0	3.0	chr17	75897027	75897092	(7360349)	+	G-rich	Low_complexity	1	66	(0)	1676985
12	23.7	2.5	0.0	chr17	76540905	76540944	(6716497)	+	(TCCCCT)n	Simple_repeat	1	41	(0)	1678238
36	2.6	2.6	0.0	chr17	76546434	76546472	(6710969)	+	(TG)n	Simple_repeat	1	40	(0)	1678249
594	28.0	13.8	0.0	chr17	76546747	76546946	(6710495)	C	MIR	SINE/MIR	(0)	262	31	1678250
31	24.3	5.9	0.0	chr17	76697885	76697988	(6559453)	+	GA-rich	Low_complexity	1	110	(0)	1678562
197	17.5	18.2	7.2	chr17	77166940	77167050	(6090391)	+	L2a	LINE/L2	3258	3383	(43)	1679595
1817	15.1	6.1	2.0	chr17	77167136	77167434	(6090007)	C	AluSz6	SINE/Alu	(0)	312	1	1679596
620	17.3	7.3	0.0	chr17	77167517	77167643	(6089798)	C	L1MC2	LINE/L1	(11)	6333	6197	1679597
641	17.4	5.8	3.5	chr17	77167644	77167822	(6089619)	C	MER61D	LTR/ERV1	(223)	544	293	1679598
258	28.1	9.7	0.0	chr17	77247558	77247678	(6009763)	C	MIR	SINE/MIR	(92)	170	37	1679714
582	28.4	6.4	3.9	chr17	77247675	77247934	(6009507)	+	L2b	LINE/L2	3035	3301	(74)	1679715
1456	23.8	4.5	3.0	chr17	78545324	78545691	(4711750)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	1682010
2508	9.0	0.0	0.0	chr17	79340017	79340327	(3917114)	+	AluSx	SINE/Alu	1	311	(1)	1683309
21	14.6	0.0	0.0	chr17	79796789	79796826	(3460615)	+	(GCC)n	Simple_repeat	1	38	(0)	1683951
207	27.7	23.5	0.0	chr17	79922648	79922748	(3334693)	C	MIRb	SINE/MIR	(77)	191	60	1684178
428	29.2	8.3	4.1	chr17	79922891	79923108	(3334333)	C	MIRb	SINE/MIR	(7)	255	28	1684179
12	9.6	8.6	2.6	chr17	81397107	81397141	(1860300)	+	(GCGCG)n	Simple_repeat	1	38	(0)	1686228
19	17.2	0.0	0.0	chr17	81397396	81397428	(1860013)	+	A-rich	Low_complexity	1	33	(0)	1686229
816	13.6	3.1	0.0	chr17	81601432	81601556	(1655885)	C	AluSz6	SINE/Alu	(183)	129	1	1686462
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
1221	27.2	11.8	3.4	chr17	82366895	82367746	(889695)	C	L1MEg	LINE/L1	(4367)	2670	1738	1687532
1685	7.4	2.8	0.0	chr17	82367747	82367988	(889453)	C	LTR71B	LTR/ERV1	(0)	610	362	1687533
667	17.8	0.8	1.5	chr17	82528913	82529043	(728398)	+	MER20	DNA/hAT-Charlie	26	155	(64)	1687821
2487	19.3	6.2	2.6	chr17	82667951	82668910	(588531)	C	MER52D	LTR/ERV1	(586)	1537	1	1688057
278	19.3	11.7	1.2	chr17	83001533	83001616	(255825)	+	L1ME2	LINE/L1	5908	6001	(163)	1688472
350	24.3	5.9	4.3	chr17	83001677	83001774	(255667)	+	HAL1b	LINE/L1	2302	2403	(18)	1688473
1781	17.0	4.7	0.0	chr17	83001775	83002056	(255385)	C	AluJb	SINE/Alu	(11)	301	6	1688474
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
9520	18.7	3.3	1.4	chr18	13339763	13342460	(67030825)	C	L1MB2	LINE/L1	(0)	6772	4018	1708974
26	0.0	0.0	0.0	chr18	13342478	13342502	(67030783)	+	(T)n	Simple_repeat	1	25	(0)	1708975
247	17.1	2.4	0.0	chr18	13342508	13342587	(67030698)	C	L1M4	LINE/L1	(1699)	4447	4352	1708976
1433	20.5	0.5	4.9	chr18	13342570	13343069	(67030216)	C	L1MB2	LINE/L1	(3735)	3006	2520	1708974
6467	19.9	2.6	2.8	chr18	21034062	21035234	(59338051)	+	L1M4	LINE/L1	4899	6081	(600)	1711801
301	17.1	0.6	0.6	chr18	21035235	21035302	(59337983)	+	FLAM_C	SINE/Alu	1	42	(91)	1711806
2218	18.1	8.3	9.8	chr18	21035303	21035377	(59337908)	+	L1MB4	LINE/L1	5531	5608	(572)	1711807
877	15.4	0.0	0.0	chr18	21035378	21035500	(59337785)	+	AluJo	SINE/Alu	1	123	(189)	1711808
15	21.2	0.0	4.3	chr18	21111889	21111935	(59261350)	+	G-rich	Low_complexity	1	47	(0)	1711924
608	25.3	12.2	6.6	chr18	21248133	21248403	(59124882)	C	MER102a	DNA/hAT-Charlie	(1)	329	42	1712217
2312	17.6	0.3	0.6	chr18	21274002	21274367	(59098918)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	1712267
1214	17.5	0.0	0.0	chr18	21274411	21274593	(59098692)	C	AluJb	SINE/Alu	(12)	300	118	1712268
1869	19.1	2.4	0.0	chr18	21274612	21274894	(59098391)	+	AluJo	SINE/Alu	1	290	(22)	1712269
13	16.0	8.6	5.3	chr18	21704403	21704490	(58668795)	+	(CCCTGCG)n	Simple_repeat	1	90	(0)	1713146
17	18.7	2.5	8.6	chr18	21704672	21704750	(58668535)	+	G-rich	Low_complexity	1	81	(0)	1713147
7620	14.9	1.7	3.2	chr18	22662518	22663940	(57709345)	+	L1PA17	LINE/L1	3743	5144	(1002)	1714844
15	29.2	2.7	2.6	chr18	23135480	23135553	(57237732)	+	(AGCC)n	Simple_repeat	1	76	(0)	1715683
40	27.5	1.4	2.8	chr18	23135766	23135908	(57237377)	+	(GCC)n	Simple_repeat	1	145	(0)	1715684
227	33.9	7.9	1.1	chr18	23747736	23747911	(56625374)	C	L2	LINE/L2	(944)	2475	2287	1716806
273	35.0	1.0	1.9	chr18	23823594	23823698	(56549587)	+	L2b	LINE/L2	3271	3374	(1)	1716908
10709	9.3	3.0	1.4	chr18	24256145	24258752	(56114533)	+	L1MA2	LINE/L1	5075	7723	(0)	1717586
26	6.3	0.0	0.0	chr18	24272237	24272270	(56101015)	+	(T)n	Simple_repeat	1	34	(0)	1717614
19	19.0	0.0	6.6	chr18	24397927	24397997	(55975288)	+	(CCCCG)n	Simple_repeat	1	66	(0)	1717870
2925	18.8	6.6	6.6	chr18	24964129	24964810	(55408475)	C	LTR8A	LTR/ERV1	(12)	715	34	1718748
2090	11.8	2.9	0.7	chr18	25728471	25728774	(54644511)	+	AluSx	SINE/Alu	2	312	(0)	1719734
15	0.0	0.0	4.3	chr18	25728775	25728797	(54644488)	+	(AAGA)n	Simple_repeat	1	23	(0)	1719735
357	31.8	9.2	1.5	chr18	25728988	25729188	(54644097)	C	MLT1N2	LTR/ERVL-MaLR	(182)	428	211	1719733
1640	16.7	8.9	7.9	chr18	26118779	26119169	(54254116)	C	Charlie1a	DNA/hAT-Charlie	(127)	1328	933	1720345
6741	26.7	3.4	3.4	chr18	26119181	26119235	(54254050)	+	L1PA11	LINE/L1	7	57	(6924)	1720347
1739	11.4	25.1	0.3	chr18	26119236	26119597	(54253688)	C	LTR19A	LTR/ERV1	(4)	482	1	1720348
2476	15.7	14.4	1.9	chr18	26210262	26210691	(54162594)	+	MLT2B3	LTR/ERVL	5	507	(47)	1720530
30	2.8	2.8	0.0	chr18	26210692	26210727	(54162558)	+	(CTAT)n	Simple_repeat	1	37	(0)	1720531
2476	15.7	14.4	1.9	chr18	26210728	26210776	(54162509)	+	MLT2B3	LTR/ERVL	508	554	(0)	1720530
312	36.8	9.2	3.0	chr18	26506185	26506520	(53866765)	C	L2b	LINE/L2	(16)	3359	3001	1721027
701	17.9	9.1	17.0	chr18	26506735	26506883	(53866402)	+	MER3	DNA/hAT-Charlie	1	154	(55)	1721028
12	17.0	7.5	0.0	chr18	26656783	26656822	(53716463)	+	G-rich	Low_complexity	1	43	(0)	1721303
1851	5.6	0.0	0.0	chr18	27143739	27143969	(53229316)	+	L1PA8	LINE/L1	5939	6169	(3)	1722010
340	24.8	1.8	1.8	chr18	27144047	27144157	(53229128)	+	MamSINE1	SINE/tRNA-RTE	10	120	(170)	1722011
803	12.0	4.8	1.7	chr18	27855274	27856849	(52516436)	+	(TA)n	Simple_repeat	1	1651	(0)	1722974
6512	10.2	0.3	0.3	chr18	27856850	27857789	(52515496)	C	L1PA13	LINE/L1	(1175)	4971	4032	1722973
24	22.9	2.7	1.3	chr18	28176821	28176893	(52196392)	+	(GCGGC)n	Simple_repeat	1	75	(0)	1723415
15	17.1	2.4	2.4	chr18	28176906	28176946	(52196339)	+	(CCCCG)n	Simple_repeat	1	42	(0)	1723416
15	14.7	6.2	2.0	chr18	28177023	28177057	(52196228)	+	GA-rich	Low_complexity	1	37	(0)	1723417
28	0.0	0.0	0.0	chr18	28177058	28177083	(52196202)	+	(GGC)n	Simple_repeat	1	26	(0)	1723418
15	14.7	6.2	2.0	chr18	28177084	28177095	(52196190)	+	GA-rich	Low_complexity	38	49	(0)	1723419
12	30.1	0.0	3.5	chr18	28177146	28177202	(52196083)	+	(CCCCGCT)n	Simple_repeat	1	57	(0)	1723420
259	14.3	0.0	0.0	chr18	31611270	31611311	(48761974)	+	L2a	LINE/L2	3371	3412	(14)	1727937
2405	20.0	7.2	1.7	chr18	31787493	31788073	(48585212)	+	L1ME2z	LINE/L1	5827	6441	(3)	1728204
49	0.0	0.0	0.0	chr18	32093106	32093150	(48280135)	+	(CTCCCGCT)n	Simple_repeat	1	45	(0)	1728828
2425	6.3	0.3	3.0	chr18	32158565	32158867	(48214418)	C	AluSx	SINE/Alu	(17)	295	1	1728973
17	15.5	2.8	0.0	chr18	32470786	32470821	(47902464)	+	(CCT)n	Simple_repeat	1	37	(0)	1729400
22	20.9	1.8	0.0	chr18	32470926	32470980	(47902305)	+	(CCGCCT)n	Simple_repeat	1	56	(0)	1729401
7462	19.6	2.8	2.2	chr18	33351493	33351568	(47021717)	C	L1MB5	LINE/L1	(2358)	4389	4330	1730610
1634	17.2	0.4	3.9	chr18	33351569	33351852	(47021433)	C	AluJb	SINE/Alu	(38)	274	1	1730613
7462	21.9	4.2	2.5	chr18	33351853	33354608	(47018677)	C	L1MB5	LINE/L1	(2418)	4329	1439	1730610
288	26.4	3.3	4.3	chr18	33521459	33521735	(46851550)	+	L1MEd	LINE/L1	2060	2351	(3795)	1730846
310	36.9	5.3	0.5	chr18	33521763	33521961	(46851324)	+	L1MEc	LINE/L1	188	396	(6004)	1730847
17	32.4	2.9	0.0	chr18	33578113	33578181	(46795104)	+	(GC)n	Simple_repeat	1	71	(0)	1730902
598	28.4	16.8	0.8	chr18	34867996	34868481	(45504804)	C	L4_B_Mam	LINE/RTE-X	(18)	4923	4345	1732529
864	15.3	5.8	0.6	chr18	35174227	35174390	(45198895)	+	MLT1B	LTR/ERVL-MaLR	1	173	(217)	1732946
20	31.6	0.0	0.0	chr18	35174406	35174468	(45198817)	+	(CTCT)n	Simple_repeat	1	63	(0)	1732947
12	16.8	7.5	0.0	chr18	35174475	35174514	(45198771)	+	(CCCCCA)n	Simple_repeat	1	43	(0)	1732948
986	19.6	0.0	7.3	chr18	35174526	35174745	(45198540)	+	MLT1B	LTR/ERVL-MaLR	187	390	(0)	1732946
240	19.6	7.3	0.0	chr18	35174942	35174992	(45198293)	C	L2a	LINE/L2	(8)	3418	3364	1732949
2676	8.4	0.0	0.0	chr18	35258590	35258899	(45114386)	+	AluSg4	SINE/Alu	1	310	(0)	1733060
509	33.7	12.9	3.1	chr18	35258900	35259037	(45114248)	+	Plat_L3	LINE/CR1	3231	3405	(181)	1733059
2130	14.9	5.2	6.3	chr18	35259038	35259192	(45114093)	C	MLT1B	LTR/ERVL-MaLR	(1)	389	239	1733061
7164	23.5	9.1	4.5	chr18	35285205	35287863	(45085422)	+	L1ME2	LINE/L1	2434	5229	(917)	1733108
1762	20.6	0.0	0.3	chr18	35287864	35288173	(45085112)	C	AluJb	SINE/Alu	(3)	309	1	1733109
7164	21.5	13.1	2.1	chr18	35288174	35288952	(45084333)	+	L1ME2	LINE/L1	5230	6161	(3)	1733108
2720	29.6	7.7	2.2	chr18	35294063	35295820	(45077465)	C	ERVL-E-int	LTR/ERVL	(393)	5274	3419	1733120
2352	25.1	4.3	1.1	chr18	35354669	35355657	(45017628)	C	L1MD2	LINE/L1	(5153)	1487	471	1733200
27	13.7	3.5	1.7	chr18	35581439	35581496	(44791789)	+	(CGC)n	Simple_repeat	1	60	(0)	1733545
8234	8.3	12.3	0.1	chr18	36064075	36065175	(44308110)	+	LTR12D	LTR/ERV1	1	1254	(0)	1734235
3738	16.9	25.7	1.5	chr18	36101690	36102498	(44270787)	C	LTR27E	LTR/ERV1	(4)	1073	1	1734309
6053	11.0	1.3	1.0	chr18	36233031	36234683	(44138602)	C	L1PB1	LINE/L1	(2)	6865	5211	1734528
1708	17.7	1.3	4.4	chr18	40062476	40062792	(40310493)	+	AluJo	SINE/Alu	1	307	(5)	1739518
5047	8.5	11.9	0.1	chr18	40245578	40246305	(40126980)	+	LTR12	LTR/ERV1	1	825	(1)	1739769
3550	20.7	3.3	2.9	chr18	46965076	46965927	(33407358)	C	HSMAR2	DNA/TcMar-Mariner	(1)	1301	447	1749559
437	11.9	0.0	0.0	chr18	47175826	47175884	(33197401)	+	AluYk2	SINE/Alu	233	291	(20)	1749802
548	25.9	4.5	2.5	chr18	47176501	47176574	(33196711)	+	Charlie5	DNA/hAT-Charlie	2378	2451	(173)	1749803
194	22.8	10.9	1.7	chr18	47932110	47932167	(32441118)	C	MIRc	SINE/MIR	(176)	92	29	1751017
659	23.8	6.1	3.1	chr18	48904866	48905056	(31468229)	+	MamTip3	DNA/hAT-Tip100	173	369	(131)	1752639
139	9.5	2.6	1.3	chr18	48905091	48905320	(31467965)	+	(GAAG)n	Simple_repeat	1	236	(0)	1752640
19	18.3	4.5	4.3	chr18	48951510	48951576	(31421709)	+	(GCG)n	Simple_repeat	1	70	(0)	1752713
1844	15.4	1.8	0.4	chr18	49349680	49349959	(31023326)	+	AluJr	SINE/Alu	6	289	(23)	1753367
612	27.3	11.1	6.6	chr18	49349960	49350418	(31022867)	+	L1ME4b	LINE/L1	195	677	(215)	1753366
13	16.9	3.0	0.0	chr18	49486986	49487018	(30886267)	+	G-rich	Low_complexity	1	34	(0)	1753633
78	6.2	1.0	0.9	chr18	52792755	52792858	(27580427)	+	(ATTCC)n	Simple_repeat	1	105	(0)	1758954
28122	17.0	7.8	7.8	chr18	52792859	52792933	(27580352)	C	HUERS-P3b-int	LTR/ERV1	(7329)	89	25	1758952
9902	13.5	3.1	3.8	chr18	54081864	54083504	(26289781)	+	THE1C-int	LTR/ERVL-MaLR	3	1631	(0)	1760679
22	13.0	0.0	0.0	chr18	54828793	54828826	(25544459)	+	(TG)n	Simple_repeat	1	34	(0)	1761828
841	26.9	4.8	1.1	chr18	58014922	58015184	(22358101)	C	Tigger20a	DNA/TcMar-Tigger	(89)	884	612	1766645
410	33.0	5.2	1.5	chr18	58015289	58015491	(22357794)	C	Tigger20a	DNA/TcMar-Tigger	(515)	458	248	1766645
17	3.2	0.0	10.3	chr18	59899887	59899925	(20473360)	+	(GCGGG)n	Simple_repeat	1	39	(0)	1769753
16	20.1	4.3	0.0	chr18	59900267	59900312	(20472973)	+	(GGCCGG)n	Simple_repeat	1	48	(0)	1769754
1969	20.1	5.5	1.5	chr18	61987720	61988325	(18384960)	+	MER77B	LTR/ERVL	38	692	(8)	1772763
253	33.7	10.2	2.3	chr18	62667456	62667716	(17705569)	+	L2c	LINE/L2	556	839	(2580)	1773841
62	0.0	0.0	0.0	chr18	62667717	62667769	(17705516)	+	(TG)n	Simple_repeat	1	53	(0)	1773842
522	14.8	0.0	2.5	chr18	62667770	62667850	(17705435)	C	AluJr	SINE/Alu	(195)	117	39	1773843
238	31.9	3.4	4.2	chr18	62667883	62668000	(17705285)	+	L2c	LINE/L2	882	998	(2421)	1773841
286	32.0	5.5	0.0	chr18	63075019	63075171	(17298114)	C	MLT1N2	LTR/ERVL-MaLR	(1)	561	400	1774513
276	27.0	3.3	1.1	chr18	63075301	63075390	(17297895)	C	MLT1N2	LTR/ERVL-MaLR	(384)	178	87	1774513
5201	21.9	2.8	3.9	chr18	66193218	66194391	(14178894)	C	L1P4e	LINE/L1	(5131)	1160	1	1778831
443	33.0	10.9	5.0	chr18	68979759	68980240	(11393045)	+	LTR67B	LTR/ERVL	1	514	(106)	1782558
6822	10.0	2.1	0.7	chr18	74965032	74966951	(5406334)	C	L1MA2	LINE/L1	(0)	6304	4356	1790503
245	27.9	1.6	0.0	chr18	76113268	76113328	(4259957)	+	MLT1I	LTR/ERVL-MaLR	70	131	(358)	1791804
290	21.1	4.5	1.9	chr18	76113536	76113635	(4259650)	+	MLT1I	LTR/ERVL-MaLR	316	473	(16)	1791804
288	21.4	0.5	0.8	chr18	77650152	77650761	(2722524)	+	(ATCC)n	Simple_repeat	1	613	(0)	1793754
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
1707	16.9	1.7	2.3	chr18	80077201	80077501	(295784)	+	AluJr	SINE/Alu	1	299	(13)	1796099
32	0.0	0.0	0.0	chr19	267223	267252	(58350364)	+	(CGCTG)n	Simple_repeat	1	30	(0)	1796658
17	15.7	0.0	6.2	chr19	351970	352017	(58265599)	+	A-rich	Low_complexity	1	48	(0)	1796789
285	34.8	3.2	0.0	chr19	352171	352262	(58265354)	C	HERV16-int	LTR/ERVL	(4893)	103	9	1796790
769	24.5	18.7	2.2	chr19	352270	352640	(58264976)	C	LTR16	LTR/ERVL	(2)	436	1	1796790
1436	4.8	0.0	0.0	chr19	570872	571038	(58046578)	+	AluSx	SINE/Alu	111	277	(35)	1797171
999	17.8	9.8	1.5	chr19	571083	571344	(58046272)	+	LTR10B	LTR/ERV1	16	301	(204)	1797172
1132	13.0	12.8	0.4	chr19	571377	571615	(58046001)	C	HERVIP10B3-int	LTR/ERV1	(7313)	290	18	1797168
244	35.8	3.4	0.9	chr19	925385	925516	(57692100)	C	MIRc	SINE/MIR	(106)	162	25	1797903
575	14.7	1.6	10.1	chr19	1241392	1241549	(57376067)	C	FLAM_C	SINE/Alu	(90)	212	7	1798452
11	18.4	6.7	2.1	chr19	1445279	1445323	(57172293)	+	(CCGCCCA)n	Simple_repeat	1	48	(0)	1798790
2139	11.4	0.7	0.7	chr19	1838974	1839272	(56778344)	+	AluSz	SINE/Alu	2	300	(12)	1799606
12	18.3	0.0	3.0	chr19	2579335	2579367	(56038249)	+	G-rich	Low_complexity	1	33	(0)	1801150
547	24.9	2.8	6.8	chr19	2579780	2579969	(56037647)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	286	1801151
1969	15.6	0.3	0.0	chr19	2611555	2611861	(56005755)	+	AluJb	SINE/Alu	1	308	(4)	1801237
2203	11.5	0.0	0.0	chr19	2840491	2840786	(55776830)	C	AluSx1	SINE/Alu	(16)	296	1	1801761
18	17.1	4.3	0.0	chr19	2867693	2867711	(55749905)	+	A-rich	Low_complexity	1	47	(0)	1801809
19	8.2	0.0	0.0	chr19	2867712	2867737	(55749879)	+	(A)n	Simple_repeat	1	26	(0)	1801810
17	20.5	0.0	0.0	chr19	2868100	2868133	(55749483)	+	(T)n	Simple_repeat	1	34	(0)	1801811
402	25.4	21.2	0.5	chr19	3047759	3047946	(55569670)	+	L2a	LINE/L2	3172	3412	(14)	1802259
2163	10.7	1.0	0.7	chr19	3047947	3048244	(55569372)	+	AluSx1	SINE/Alu	1	299	(13)	1802260
1473	19.3	14.1	0.3	chr19	3253223	3253601	(55364015)	C	MLT1F	LTR/ERVL-MaLR	(2)	546	107	1802751
391	32.8	0.0	3.3	chr19	3253648	3253767	(55363849)	C	MIR	SINE/MIR	(132)	130	15	1802752
588	30.5	11.0	3.5	chr19	3625997	3626494	(54991122)	+	L2b	LINE/L2	2577	3156	(219)	1803672
278	27.1	0.0	6.9	chr19	4058268	4058384	(54559232)	+	MIR3	SINE/MIR	42	151	(57)	1804641
676	29.8	12.4	4.0	chr19	4812859	4813034	(53804582)	+	L2a	LINE/L2	3229	3424	(2)	1806537
866	16.5	0.0	0.0	chr19	5193998	5194130	(53423486)	+	AluJb	SINE/Alu	158	290	(22)	1807333
2318	7.8	0.0	0.0	chr19	5194132	5194442	(53423174)	C	AluSq2	SINE/Alu	(0)	313	3	1807334
363	32.9	4.5	0.9	chr19	5201020	5201234	(53416382)	C	L1ME3E	LINE/L1	(2301)	3845	3623	1807345
1988	16.6	1.3	0.3	chr19	5201352	5201658	(53415958)	C	AluJb	SINE/Alu	(1)	311	2	1807354
993	13.3	0.0	0.0	chr19	5201659	5201793	(53415823)	C	AluSx	SINE/Alu	(176)	136	2	1807355
1978	12.9	0.7	7.8	chr19	6180917	6181269	(52436347)	+	AluSz	SINE/Alu	2	312	(0)	1809631
26	3.5	0.0	0.0	chr19	6181270	6181299	(52436317)	+	(GGGAG)n	Simple_repeat	1	30	(0)	1809632
401	31.6	10.3	0.9	chr19	6736398	6736568	(51881048)	C	MIRb	SINE/MIR	(58)	210	23	1811025
2113	9.1	0.0	0.0	chr19	6985708	6985972	(51631644)	+	AluY	SINE/Alu	1	265	(46)	1811735
1476	23.4	4.2	7.6	chr19	6985973	6986256	(51631360)	C	LTR102_Mam	LTR/ERVL	(237)	614	339	1811733
254	31.4	4.2	3.5	chr19	7337208	7337349	(51280267)	+	L2b	LINE/L2	3093	3235	(140)	1812679
407	24.8	0.3	8.8	chr19	7337585	7337753	(51279863)	+	MIR	SINE/MIR	69	215	(47)	1812680
1679	12.9	0.0	16.0	chr19	7380493	7380702	(51236914)	+	AluJr	SINE/Alu	129	301	(11)	1812795
247	14.1	1.0	7.0	chr19	7380721	7380791	(51236825)	C	MER91B	DNA/hAT-Tip100	(3316)	208	81	1812794
20	6.5	0.0	2.9	chr19	7787347	7787380	(50830236)	+	(CAGCC)n	Simple_repeat	1	34	(0)	1813727
501	22.2	6.2	0.0	chr19	7787676	7787804	(50829812)	+	MIRb	SINE/MIR	1	136	(132)	1813728
2462	9.3	0.0	0.3	chr19	8260668	8260980	(50356636)	+	AluSx1	SINE/Alu	1	312	(0)	1814846
1040	27.6	11.0	2.5	chr19	9149486	9150102	(49467514)	C	L2a	LINE/L2	(260)	3166	2491	1816916
193	31.5	2.1	3.2	chr19	9157421	9157515	(49460101)	C	L2b	LINE/L2	(0)	3375	3282	1816926
377	17.5	0.0	0.0	chr19	9157696	9157758	(49459858)	C	AluJo	SINE/Alu	(179)	133	71	1816927
1208	21.0	5.3	9.3	chr19	9532097	9532264	(49085352)	C	MER44B	DNA/TcMar-Tigger	(284)	266	86	1817599
26	6.3	0.0	0.0	chr19	9532265	9532298	(49085318)	+	(T)n	Simple_repeat	1	34	(0)	1817600
1208	21.0	5.3	9.3	chr19	9532299	9532318	(49085298)	C	MER44B	DNA/TcMar-Tigger	(465)	85	85	1817599
1683	18.0	0.4	0.4	chr19	9532319	9532596	(49085020)	C	AluJb	SINE/Alu	(34)	278	1	1817601
5094	19.0	7.2	1.5	chr19	9573045	9573848	(49043768)	+	L1M3f	LINE/L1	1992	2835	(4730)	1817673
874	21.6	1.2	0.0	chr19	9573849	9574010	(49043606)	C	AluJb	SINE/Alu	(12)	300	137	1817675
773	16.1	0.0	3.6	chr19	9574030	9574063	(49043553)	C	AluJb	SINE/Alu	(179)	133	104	1817676
4330	7.1	1.7	5.5	chr19	9574064	9574156	(49043460)	C	LTR10C	LTR/ERV1	(0)	591	527	1817677
422	19.7	0.0	0.0	chr19	9621595	9621665	(48995951)	+	FLAM_C	SINE/Alu	1	71	(62)	1817789
3155	15.1	1.8	2.5	chr19	9621666	9622251	(48995365)	C	LTR10C	LTR/ERV1	(62)	529	1	1817790
1560	22.4	1.0	0.0	chr19	9659810	9660113	(48957503)	+	AluSz	SINE/Alu	1	307	(5)	1817860
1056	18.9	0.0	0.0	chr19	9660114	9660282	(48957334)	+	AluSx	SINE/Alu	134	302	(10)	1817861
700	13.8	0.0	0.0	chr19	9674426	9674534	(48943082)	+	AluSx	SINE/Alu	194	302	(10)	1817895
731	17.2	0.0	0.0	chr19	9675436	9675551	(48942065)	+	FLAM_C	SINE/Alu	1	116	(27)	1817897
1103	14.0	1.1	0.0	chr19	9827158	9827336	(48790280)	+	MER51D	LTR/ERV1	477	657	(0)	1818214
17	13.9	0.0	6.7	chr19	10543828	10543872	(48073744)	+	G-rich	Low_complexity	1	45	(0)	1820056
2108	12.1	0.3	2.3	chr19	10760033	10760339	(47857277)	C	AluSz	SINE/Alu	(11)	301	1	1820625
1723	16.7	2.4	2.0	chr19	10760662	10760955	(47856661)	C	AluJr	SINE/Alu	(12)	300	6	1820626
9581	10.7	3.7	5.1	chr19	11606364	11607128	(47010488)	C	THE1C-int	LTR/ERVL-MaLR	(327)	1253	497	1822780
2162	13.8	0.0	0.3	chr19	11695366	11695676	(46921940)	+	AluJb	SINE/Alu	1	310	(2)	1822953
1004	26.2	9.9	4.2	chr19	11738025	11738525	(46879091)	+	LTR26C	LTR/ERV1	7	539	(0)	1823045
1097	22.2	11.8	1.8	chr19	11767468	11767924	(46849692)	C	LTR26E	LTR/ERV1	(0)	622	48	1823096
1574	20.2	4.0	9.9	chr19	11814743	11814993	(46802623)	C	LTR10B1	LTR/ERV1	(0)	547	295	1823182
2432	16.4	5.4	2.2	chr19	11942460	11942907	(46674709)	C	LTR2	LTR/ERV1	(0)	463	1	1823439
3955	14.7	0.0	0.0	chr19	11942908	11943485	(46674131)	C	HERVE-int	LTR/ERV1	(1)	6895	6318	1823439
876	22.2	14.1	2.4	chr19	12400310	12400775	(46216841)	+	LTR26E	LTR/ERV1	1	593	(29)	1824373
27	0.0	0.0	0.0	chr19	12401542	12401567	(46216049)	+	(T)n	Simple_repeat	1	26	(0)	1824374
36	0.0	0.0	0.0	chr19	12401570	12401600	(46216016)	+	(GA)n	Simple_repeat	1	31	(0)	1824375
2029	8.1	2.5	1.8	chr19	12401601	12401872	(46215744)	C	AluSg	SINE/Alu	(35)	275	2	1824376
844	23.1	14.3	2.1	chr19	12440152	12440636	(46176980)	+	LTR26E	LTR/ERV1	1	622	(0)	1824454
2193	8.4	2.0	1.7	chr19	12441380	12441676	(46175940)	C	AluSg	SINE/Alu	(11)	299	2	1824455
11	19.5	3.9	5.6	chr19	12484382	12484433	(46133183)	+	G-rich	Low_complexity	1	54	(0)	1824522
2585	7.4	0.0	0.0	chr19	12500935	12501245	(46116371)	+	AluY	SINE/Alu	1	311	(0)	1824565
845	19.1	9.6	1.2	chr19	12501248	12501409	(46116207)	+	AluJb	SINE/Alu	133	309	(3)	1824566
1570	15.1	3.5	4.1	chr19	12501444	12501637	(46115979)	C	MER49	LTR/ERV1	(634)	289	97	1824567
2337	9.0	0.7	0.0	chr19	12614594	12614892	(46002724)	C	AluSp	SINE/Alu	(12)	301	1	1824836
38	0.0	0.0	0.0	chr19	12614893	12614927	(46002689)	+	(T)n	Simple_repeat	1	35	(0)	1824837
462	19.5	0.0	0.0	chr19	12614928	12615004	(46002612)	C	AluJr	SINE/Alu	(196)	116	40	1824838
1641	14.3	1.6	0.0	chr19	12615013	12615282	(46002334)	C	AluJo	SINE/Alu	(0)	312	34	1824839
2800	22.4	2.2	1.3	chr19	12615287	12615498	(46002118)	C	L1MC2	LINE/L1	(348)	5996	5786	1824840
1569	17.8	6.3	1.9	chr19	12617424	12617756	(45999860)	C	L1MC2	LINE/L1	(3214)	2932	2575	1824840
790	18.2	15.4	0.0	chr19	12617759	12617906	(45999710)	C	AluSc	SINE/Alu	(3)	306	132	1824846
2245	12.8	0.0	0.0	chr19	12617908	12618213	(45999403)	C	AluSq2	SINE/Alu	(3)	310	5	1824847
2341	8.1	0.7	0.0	chr19	12680834	12681131	(45936485)	C	AluSx3	SINE/Alu	(11)	300	1	1824984
558	29.0	5.6	3.8	chr19	13042666	13042927	(45574689)	C	L1ME4a	LINE/L1	(293)	5831	5565	1825798
1089	10.2	2.4	6.2	chr19	14431683	14431858	(44185758)	C	AluJb	SINE/Alu	(8)	304	136	1829491
207	23.6	9.5	0.7	chr19	14432291	14432371	(44185245)	C	MIRc	SINE/MIR	(117)	151	51	1829492
192	32.4	5.4	5.4	chr19	15419323	15419433	(43198183)	+	MIR3	SINE/MIR	18	128	(80)	1831770
2659	29.7	3.0	4.5	chr19	15702172	15703227	(42914389)	+	L1PBa	LINE/L1	601	1640	(5223)	1832372
2379	6.8	0.7	0.3	chr19	17507354	17507649	(41109967)	C	AluY	SINE/Alu	(14)	297	1	1836544
1845	17.9	1.0	0.3	chr19	17507653	17507943	(41109673)	C	AluJo	SINE/Alu	(17)	295	3	1836545
2451	5.2	0.0	0.0	chr19	17511032	17511319	(41106297)	C	AluSc8	SINE/Alu	(22)	289	2	1836555
5085	12.2	3.4	5.3	chr19	18336221	18336500	(40281116)	+	LTR1A2	LTR/ERV1	558	837	(0)	1838653
1078	16.0	0.0	4.8	chr19	18336501	18336518	(40281098)	C	AluSx	SINE/Alu	(162)	150	133	1838651
996	10.7	1.5	0.0	chr19	18336520	18336650	(40280966)	C	AluSz6	SINE/Alu	(179)	133	1	1838655
1926	9.2	5.9	5.9	chr19	18590215	18590518	(40027098)	C	AluSz6	SINE/Alu	(6)	306	3	1839179
698	22.9	18.9	0.3	chr19	19259855	19260143	(39357473)	+	MLT1K	LTR/ERVL-MaLR	129	483	(112)	1840638
1013	18.4	4.2	7.2	chr19	19260149	19260204	(39357412)	C	MER20	DNA/hAT-Charlie	(0)	219	170	1840639
2326	11.5	0.0	0.0	chr19	19260205	19260516	(39357100)	C	AluSx	SINE/Alu	(0)	312	1	1840640
2153	12.2	1.0	0.0	chr19	19686853	19687156	(38930460)	+	AluSz6	SINE/Alu	1	307	(5)	1841442
12	27.7	0.0	2.2	chr19	19687319	19687363	(38930253)	+	(CTCC)n	Simple_repeat	1	45	(0)	1841443
356	26.3	4.8	0.0	chr19	19777091	19777208	(38840408)	+	HERVL40-int	LTR/ERVL	3762	3885	(1645)	1841600
2598	16.1	1.6	0.8	chr19	21082695	21083042	(37534574)	C	MER57E3	LTR/ERV1	(1)	486	135	1843498
1244	15.4	0.0	0.9	chr19	21328634	21328856	(37288760)	+	MER57E3	LTR/ERV1	267	487	(0)	1843854
2559	14.7	0.6	8.0	chr19	21359501	21359596	(37258020)	C	MER57E3	LTR/ERV1	(0)	487	395	1843905
2649	14.0	2.1	2.7	chr19	21767007	21767079	(36850537)	+	MER57E3	LTR/ERV1	421	487	(0)	1844508
1462	22.9	4.3	5.1	chr19	23243965	23244093	(35373523)	+	L1PREC2	LINE/L1	6029	6159	(1)	1846387
769	29.5	9.8	5.5	chr19	23244611	23244990	(35372626)	C	MER21C	LTR/ERVL	(43)	895	498	1846390
1833	12.1	3.1	4.7	chr19	23273428	23273725	(35343891)	+	AluSz	SINE/Alu	1	293	(19)	1846448
2208	20.3	2.7	2.9	chr19	23273726	23273754	(35343862)	+	MER57E3	LTR/ERV1	459	481	(6)	1846447
16	10.8	0.0	3.1	chr19	24033318	24033349	(34584267)	+	(GGGGTG)n	Simple_repeat	1	32	(0)	1847495
1530	11.6	7.2	0.0	chr19	24033971	24034203	(34583413)	C	AluSz6	SINE/Alu	(18)	294	44	1847496
1737	15.3	6.8	0.0	chr19	24034489	24034775	(34582841)	C	AluSx	SINE/Alu	(3)	309	2	1847497
1285	9.3	0.0	0.0	chr19	24034786	24034947	(34582669)	C	AluSx1	SINE/Alu	(14)	298	137	1847498
15	4.8	0.0	0.0	chr19	30226674	30226695	(28390921)	+	(AAAT)n	Simple_repeat	1	22	(0)	1851576
3807	9.8	0.2	11.1	chr19	33080508	33080720	(25536896)	+	L1PA15	LINE/L1	5976	6163	(2)	1856120
1347	17.8	10.8	5.7	chr19	34021274	34021607	(24596009)	C	HAL1M8	LINE/L1	(669)	2322	1970	1857711
2310	18.4	7.3	5.2	chr19	34021975	34022553	(24595063)	C	HAL1M8	LINE/L1	(1100)	1891	1300	1857711
278	34.8	5.6	0.0	chr19	34734412	34734546	(23883070)	+	MIR	SINE/MIR	50	192	(70)	1859056
15	19.7	0.0	0.0	chr19	34926695	34926723	(23690893)	+	(T)n	Simple_repeat	1	29	(0)	1859341
854	32.0	11.4	3.0	chr19	34962755	34963409	(23654207)	+	L2	LINE/L2	2366	3082	(337)	1859399
928	15.7	2.4	0.1	chr19	34973115	34973285	(23644331)	C	MLT1E3	LTR/ERVL-MaLR	(8)	616	372	1859418
550	22.0	2.8	3.4	chr19	34973392	34973537	(23644079)	+	MER5A1	DNA/hAT-Charlie	1	145	(21)	1859419
783	18.9	1.8	6.1	chr19	34973560	34973603	(23644013)	C	MER5B	DNA/hAT-Charlie	(0)	178	143	1859420
56	0.0	0.0	0.0	chr19	34973604	34973651	(23643965)	+	(GT)n	Simple_repeat	1	48	(0)	1859421
2231	8.5	0.3	0.0	chr19	34973652	34973934	(23643682)	C	AluSx1	SINE/Alu	(28)	284	1	1859422
31	10.7	0.0	0.0	chr19	35900798	35900849	(22716767)	+	(T)n	Simple_repeat	1	52	(0)	1861405
2306	25.8	12.2	8.3	chr19	36221588	36221919	(22395697)	C	L1MC5a	LINE/L1	(1866)	911	594	1862159
1875	16.8	2.6	0.0	chr19	36221920	36222223	(22395393)	C	AluJo	SINE/Alu	(0)	312	1	1862165
1925	9.9	0.4	5.4	chr19	36238830	36239127	(22378489)	+	MER1B	DNA/hAT-Charlie	57	339	(0)	1862201
1211	22.7	4.7	4.3	chr19	36239326	36239624	(22377992)	C	AluJo	SINE/Alu	(11)	301	2	1862202
12739	0.5	0.0	2.1	chr19	36270447	36272042	(22345574)	+	SST1	Satellite/centr	1	1563	(0)	1862253
24	29.7	0.0	2.5	chr19	36272043	36272123	(22345493)	+	(GT)n	Simple_repeat	1	81	(0)	1862254
26	23.7	3.8	3.6	chr19	36272113	36272129	(22345487)	+	(CTGTCT)n	Simple_repeat	1	66	(44)	1862255
36	20.5	1.2	1.2	chr19	36272130	36272209	(22345407)	+	(TC)n	Simple_repeat	1	81	(0)	1862256
26	23.7	3.8	3.6	chr19	36272210	36272218	(22345398)	+	(CTGTCT)n	Simple_repeat	67	110	(0)	1862255
11383	1.6	0.0	2.0	chr19	36308415	36309981	(22307635)	+	SST1	Satellite/centr	1	1535	(28)	1862299
680	18.2	7.8	7.3	chr19	36364962	36365166	(22252450)	C	AluJo	SINE/Alu	(0)	312	137	1862397
2031	14.6	0.0	0.0	chr19	36379389	36379690	(22237926)	C	AluJo	SINE/Alu	(10)	302	1	1862427
1835	8.3	0.0	0.0	chr19	36462758	36462986	(22154630)	+	AluSc8	SINE/Alu	83	311	(0)	1862594
1426	18.7	0.4	0.0	chr19	36463046	36463275	(22154341)	+	AluJo	SINE/Alu	25	255	(57)	1862595
369	29.1	2.7	3.2	chr19	36463349	36463533	(22154083)	+	L1MEf	LINE/L1	4408	4591	(1555)	1862588
1574	22.9	9.6	1.4	chr19	36479122	36479627	(22137989)	+	L1MC4a	LINE/L1	4019	4570	(1576)	1862626
848	21.9	1.2	0.0	chr19	36479636	36479799	(22137817)	C	AluJr	SINE/Alu	(13)	299	134	1862627
23	15.2	3.9	0.0	chr19	36479811	36479861	(22137755)	+	(TTTG)n	Simple_repeat	1	53	(0)	1862628
911	14.8	0.0	0.0	chr19	36479862	36479996	(22137620)	C	FLAM_C	SINE/Alu	(8)	135	1	1862629
690	27.6	14.6	1.1	chr19	36488420	36488852	(22128764)	+	L1ME3D	LINE/L1	5490	5990	(252)	1862646
15	27.1	2.2	6.5	chr19	36489006	36489096	(22128520)	+	(CAGTCA)n	Simple_repeat	1	93	(0)	1862647
1085	31.9	9.0	4.7	chr19	36837059	36837697	(21779919)	+	L2	LINE/L2	185	853	(2566)	1863351
397	31.3	5.0	1.4	chr19	36837749	36837962	(21779654)	+	L2	LINE/L2	1826	2047	(1372)	1863351
41	2.6	0.0	0.0	chr19	36838107	36838146	(21779470)	+	(CA)n	Simple_repeat	1	40	(0)	1863352
320	20.9	2.9	0.0	chr19	36850363	36850429	(21767187)	C	MER67D	LTR/ERV1	(1)	513	445	1863382
711	18.1	11.3	3.1	chr19	36850413	36850663	(21766953)	C	MER31B	LTR/ERV1	(74)	392	1	1863383
2093	5.8	0.4	0.0	chr19	36915617	36915857	(21701759)	C	AluSc	SINE/Alu	(30)	279	38	1863508
19	21.8	0.0	2.2	chr19	36916623	36916667	(21700949)	+	(TG)n	Simple_repeat	1	45	(0)	1863509
11512	1.7	0.0	2.1	chr19	37288824	37290419	(21327197)	C	SST1	Satellite/centr	(0)	1563	1	1864177
2547	3.8	0.0	0.0	chr19	37317180	37317472	(21300144)	C	AluYc3	SINE/Alu	(6)	294	2	1864229
11	20.5	5.1	0.0	chr19	37371221	37371259	(21246357)	+	G-rich	Low_complexity	1	41	(0)	1864324
1603	17.4	5.6	0.4	chr19	37438119	37438388	(21179228)	+	AluJo	SINE/Alu	1	285	(27)	1864443
18588	10.2	3.0	2.9	chr19	37438389	37439071	(21178545)	+	L1MA3	LINE/L1	6217	6886	(838)	1864438
366	25.7	6.6	0.0	chr19	37692539	37692651	(20924965)	C	L1MEg	LINE/L1	(4033)	2051	1931	1864911
229	24.7	4.7	10.0	chr19	37718100	37718189	(20899427)	C	Charlie4z	DNA/hAT-Charlie	(55)	112	28	1864964
2037	17.4	11.1	0.0	chr19	37718571	37719001	(20898615)	+	MER31A	LTR/ERV1	1	485	(0)	1864965
1843	14.9	0.4	2.8	chr19	37865599	37865887	(20751729)	C	AluJr	SINE/Alu	(30)	282	1	1865245
13	22.8	1.8	1.8	chr19	37865894	37865926	(20751690)	+	A-rich	Low_complexity	1	33	(0)	1865246
1440	16.8	5.4	0.0	chr19	37865927	37866170	(20751446)	C	AluJb	SINE/Alu	(23)	289	32	1865247
213	26.5	16.4	0.3	chr19	38374243	38374355	(20243261)	+	MIR	SINE/MIR	18	155	(113)	1866528
891	13.1	1.5	0.0	chr19	38619481	38619610	(19998006)	+	FLAM_C	SINE/Alu	2	133	(10)	1867102
1677	16.4	3.4	0.3	chr19	38931546	38931832	(19685784)	C	AluJo	SINE/Alu	(11)	301	6	1867784
2192	9.2	5.8	0.3	chr19	38931871	38932162	(19685454)	+	AluSx1	SINE/Alu	1	309	(3)	1867785
270	28.1	4.6	4.6	chr19	39996743	39996850	(18620766)	C	L2c	LINE/L2	(0)	3387	3280	1870082
1352	20.3	3.7	4.9	chr19	40433169	40433473	(18184143)	+	AluJo	SINE/Alu	2	302	(10)	1871049
492	25.5	20.9	0.5	chr19	40433498	40433706	(18183910)	C	L2a	LINE/L2	(338)	3081	2819	1871042
213	32.4	2.8	1.9	chr19	40433754	40433860	(18183756)	C	L2a	LINE/L2	(198)	3177	3070	1871042
15	14.7	0.0	0.0	chr19	40433948	40433977	(18183639)	+	(GGGA)n	Simple_repeat	1	30	(0)	1871050
320	31.4	8.5	0.6	chr19	40646985	40647157	(17970459)	C	MLT1L	LTR/ERVL-MaLR	(24)	586	384	1871607
1151	13.1	1.0	2.5	chr19	40647172	40647367	(17970249)	C	AluSx	SINE/Alu	(0)	312	120	1871608
8491	3.2	0.7	25.4	chr19	40647368	40649204	(17968412)	C	SVA_D	Retroposon/SVA	(1)	1385	7	1871609
35	19.6	0.0	1.4	chr19	41218733	41218804	(17398812)	+	(TG)n	Simple_repeat	1	72	(0)	1872914
15	14.9	2.6	2.5	chr19	41218857	41218895	(17398721)	+	(GGCTGG)n	Simple_repeat	1	40	(0)	1872915
16	14.4	2.5	2.4	chr19	41218943	41218982	(17398634)	+	(CCAGAGC)n	Simple_repeat	1	41	(0)	1872916
424	23.1	4.2	0.0	chr19	43826609	43826699	(14790917)	+	MER58B	DNA/hAT-Charlie	149	243	(98)	1877782
390	27.7	5.7	0.7	chr19	43951581	43951729	(14665887)	+	MIR	SINE/MIR	83	239	(23)	1877972
2749	0.7	0.0	0.0	chr19	43951850	43952172	(14665444)	C	AluY	SINE/Alu	(0)	311	1	1877973
1348	20.7	1.9	0.8	chr19	44164479	44164746	(14452870)	C	MLT1A0	LTR/ERVL-MaLR	(94)	271	1	1878309
355	25.6	8.8	0.6	chr19	44165401	44165557	(14452059)	+	MIR	SINE/MIR	61	231	(31)	1878310
311	31.6	0.0	2.1	chr19	44207850	44207946	(14409670)	+	MIR	SINE/MIR	61	155	(107)	1878370
2309	5.2	2.2	0.0	chr19	44211889	44212159	(14405457)	C	AluSx4	SINE/Alu	(5)	305	29	1878384
21	4.1	0.0	0.0	chr19	44212367	44212391	(14405225)	+	(T)n	Simple_repeat	1	25	(0)	1878385
14	15.8	0.0	5.1	chr19	44212678	44212716	(14404900)	+	(GAGGCC)n	Simple_repeat	1	39	(0)	1878386
481	27.7	2.8	0.0	chr19	44212780	44212916	(14404700)	+	MIR	SINE/MIR	95	235	(27)	1878387
1081	21.0	6.5	1.7	chr19	44453835	44454134	(14163482)	+	MER21B	LTR/ERVL	452	796	(135)	1878756
1966	11.8	1.3	0.3	chr19	44454324	44454629	(14162987)	C	L1PA10	LINE/L1	(0)	6168	5860	1878757
2177	12.9	0.0	1.9	chr19	44610292	44610609	(14007007)	C	AluJr	SINE/Alu	(0)	312	1	1879110
226	11.1	5.3	0.0	chr19	44610610	44610645	(14006971)	C	MER67B	LTR/ERV1	(594)	67	30	1879108
2225	9.7	3.2	0.0	chr19	44610809	44611106	(14006510)	C	AluSp	SINE/Alu	(5)	308	1	1879111
1164	28.4	9.6	6.6	chr19	44737106	44737208	(13880408)	+	L1ME3B	LINE/L1	6117	6226	(16)	1879482
1169	12.1	2.4	0.0	chr19	46329814	46329978	(12287638)	+	AluJr	SINE/Alu	136	304	(8)	1883401
41	21.9	2.8	2.2	chr19	46329980	46330088	(12287528)	+	GA-rich	Low_complexity	1	109	(0)	1883402
368	33.1	0.8	0.0	chr19	46431781	46431904	(12185712)	+	LTR33C	LTR/ERVL	1	125	(504)	1883644
717	32.6	4.0	6.5	chr19	46431918	46432184	(12185432)	+	MLT2F	LTR/ERVL	171	427	(236)	1883645
2150	10.7	0.4	0.0	chr19	46432185	46432492	(12185124)	C	AluSx1	SINE/Alu	(0)	312	1	1883646
849	16.9	1.7	0.0	chr19	46571447	46571623	(12045993)	C	MER53	DNA/hAT	(12)	181	2	1884020
2421	9.3	0.0	0.0	chr19	46571784	46572084	(12045532)	C	AluSx4	SINE/Alu	(9)	301	1	1884021
1857	15.2	3.3	0.0	chr19	47289273	47289569	(11328047)	C	AluSz6	SINE/Alu	(4)	308	2	1885763
2593	15.0	0.2	2.7	chr19	47289570	47289947	(11327669)	C	MER66B	LTR/ERV1	(86)	400	27	1885762
6407	14.0	2.0	1.5	chr19	47289950	47290265	(11327351)	+	L1M1	LINE/L1	759	1071	(6494)	1885764
306	26.9	0.6	19.7	chr19	47634531	47634748	(10982868)	+	L2a	LINE/L2	2414	2589	(830)	1886640
2437	6.6	0.0	0.0	chr19	47634757	47635061	(10982555)	C	AluY	SINE/Alu	(6)	305	1	1886641
355	21.2	3.4	5.6	chr19	48203649	48203738	(10413878)	+	L2a	LINE/L2	3338	3425	(1)	1888195
110	25.6	2.8	4.2	chr19	48271085	48271100	(10346516)	+	polypurine	Low_complexity	371	386	(0)	1888329
13	21.5	4.7	0.0	chr19	48271523	48271565	(10346051)	+	G-rich	Low_complexity	1	45	(0)	1888330
380	25.2	2.8	1.0	chr19	48543090	48543193	(10074423)	C	MLT1D	LTR/ERVL-MaLR	(397)	108	3	1889017
300	28.9	1.1	3.2	chr19	48543211	48543303	(10074313)	+	L2a	LINE/L2	3333	3423	(3)	1889012
13	28.9	1.8	1.8	chr19	48543416	48543471	(10074145)	+	GA-rich	Low_complexity	1	57	(0)	1889018
1885	14.3	2.4	0.9	chr19	50135965	50136288	(8481328)	+	L1PB1	LINE/L1	5822	6150	(1)	1892741
4267	15.9	0.8	4.1	chr19	50136289	50136658	(8480958)	C	L1P4	LINE/L1	(2928)	3218	2854	1892740
2289	8.2	0.3	0.0	chr19	50984303	50984595	(7633021)	C	AluSc5	SINE/Alu	(14)	295	2	1894748
12	13.9	0.0	0.0	chr19	51211115	51211138	(7406478)	+	(CTG)n	Simple_repeat	1	24	(0)	1895183
190	17.8	8.2	2.2	chr19	51888338	51888383	(6729233)	+	L3	LINE/CR1	18	66	(4033)	1896426
1495	27.8	1.2	1.9	chr19	51905172	51905603	(6712013)	C	MER57F	LTR/ERV1	(6)	429	1	1896458
1005	14.4	6.5	1.1	chr19	51926473	51926646	(6690970)	C	FAM	SINE/Alu	(0)	185	2	1896499
1077	21.3	5.8	0.1	chr19	52027681	52027961	(6589655)	+	L1MEd	LINE/L1	2434	2729	(3417)	1896647
606	6.4	0.0	0.0	chr19	52027962	52028039	(6589577)	+	LTR5_Hs	LTR/ERVK	349	426	(542)	1896664
641	15.1	3.7	0.9	chr19	52059616	52059697	(6557919)	+	AluJb	SINE/Alu	85	166	(146)	1896712
2842	14.6	18.8	4.3	chr19	52059698	52060235	(6557381)	+	MER51A	LTR/ERV1	1	634	(0)	1896713
1263	16.6	0.0	2.2	chr19	52189248	52189470	(6428146)	+	AluJb	SINE/Alu	95	312	(0)	1896964
499	22.7	2.7	0.0	chr19	52535403	52535512	(6082104)	C	FLAM_A	SINE/Alu	(27)	115	3	1897653
12	12.0	0.0	6.5	chr19	52535923	52535953	(6081663)	+	(CGCCC)n	Simple_repeat	1	31	(0)	1897654
1203	13.3	1.1	0.0	chr19	52793181	52793368	(5824248)	+	MER4A1	LTR/ERV1	281	470	(2)	1898184
433	23.3	5.0	1.9	chr19	52793385	52793588	(5824028)	C	L2b	LINE/L2	(255)	3120	2908	1898188
817	15.6	0.0	0.0	chr19	52793642	52793763	(5823853)	+	AluSq2	SINE/Alu	158	279	(34)	1898189
63	0.0	0.0	0.0	chr19	52793765	52793818	(5823798)	+	(CA)n	Simple_repeat	1	54	(0)	1898190
11	24.1	0.0	0.0	chr19	52813331	52813364	(5804252)	+	G-rich	Low_complexity	1	34	(0)	1898229
12	29.1	3.0	2.9	chr19	52820852	52820917	(5796699)	+	(TCTC)n	Simple_repeat	1	68	(0)	1898247
265	16.4	8.8	0.0	chr19	52858109	52858191	(5759425)	+	AluJb	SINE/Alu	139	219	(83)	1898333
2362	7.4	0.3	0.0	chr19	52858263	52858560	(5759056)	+	AluY	SINE/Alu	1	299	(12)	1898334
1742	18.8	0.0	0.0	chr19	52896430	52896732	(5720884)	+	AluJb	SINE/Alu	4	306	(6)	1898427
2051	15.0	2.5	5.8	chr19	52896742	52897158	(5720458)	+	MER51C	LTR/ERV1	124	526	(114)	1898428
3706	4.8	1.9	5.2	chr19	52923622	52924121	(5693495)	+	LTR2B	LTR/ERV1	1	483	(0)	1898470
480	21.4	2.8	0.0	chr19	52943094	52943196	(5674420)	+	FLAM_A	SINE/Alu	3	108	(34)	1898517
11115	14.0	0.4	0.2	chr19	52960545	52962193	(5655423)	+	HERVE-int	LTR/ERV1	5355	7006	(807)	1898547
1017	17.6	3.8	0.5	chr19	52962265	52962469	(5655147)	+	MER51C	LTR/ERV1	112	323	(317)	1898548
13	8.1	0.0	6.7	chr19	52962932	52962961	(5654655)	+	(GGGCG)n	Simple_repeat	1	30	(0)	1898549
435	12.8	4.1	6.0	chr19	53332980	53333079	(5284537)	+	L1M4	LINE/L1	4889	4986	(1160)	1899134
297	20.0	2.8	1.5	chr19	53333138	53333249	(5284367)	C	FRAM	SINE/Alu	(19)	114	3	1899135
13	20.1	5.0	0.0	chr19	53365045	53365084	(5252532)	+	GA-rich	Low_complexity	1	42	(0)	1899204
248	21.1	5.1	0.3	chr19	53365103	53365212	(5252404)	C	FRAM	SINE/Alu	(17)	116	3	1899205
373	18.3	1.2	5.8	chr19	53394391	53394477	(5223139)	+	L1M4	LINE/L1	4893	4975	(1171)	1899261
265	22.7	2.3	0.0	chr19	53394548	53394657	(5222959)	C	FRAM	SINE/Alu	(17)	116	4	1899262
2041	14.8	0.3	0.0	chr19	54081673	54081969	(4535647)	C	AluSz	SINE/Alu	(14)	298	1	1901019
2519	7.4	0.3	0.3	chr19	55634452	55634763	(2982853)	+	AluSz	SINE/Alu	1	312	(0)	1904201
16	0.0	0.0	0.0	chr19	55634771	55634788	(2982828)	+	(T)n	Simple_repeat	1	18	(0)	1904202
232	30.1	5.2	0.4	chr19	55670357	55670454	(2947162)	C	L2a	LINE/L2	(18)	3408	3251	1904263
462	26.9	10.4	3.2	chr19	56252868	56253117	(2364499)	C	LTR41B	LTR/ERVL	(488)	270	1	1905468
875	16.8	6.5	0.0	chr19	56253144	56253286	(2364330)	+	AluJr	SINE/Alu	149	301	(11)	1905469
1649	17.4	0.0	5.6	chr19	56410993	56411313	(2206303)	+	AluJb	SINE/Alu	1	303	(9)	1905760
11	27.4	1.6	4.8	chr19	56567606	56567667	(2049949)	+	(GCGTGC)n	Simple_repeat	1	63	(0)	1906004
2245	8.7	1.7	0.3	chr19	56639022	56639310	(1978306)	C	AluSc	SINE/Alu	(14)	295	3	1906139
1501	28.8	14.2	6.6	chr19	56639311	56639761	(1977855)	+	L2a	LINE/L2	2932	3426	(0)	1906138
268	28.0	5.3	0.0	chr19	57476869	57476975	(1140641)	+	L2b	LINE/L2	2770	2882	(537)	1907863
254	24.5	0.8	0.0	chr19	57477051	57477124	(1140492)	+	L2b	LINE/L2	3002	3077	(310)	1907863
842	28.3	8.2	3.6	chr19	57527913	57528411	(1089205)	C	L2	LINE/L2	(537)	2882	2359	1907946
32	17.2	0.0	0.0	chr19	57664162	57664222	(953394)	+	G-rich	Low_complexity	1	61	(0)	1908118
217	25.0	1.1	18.5	chr19	57682661	57682768	(934848)	C	MIR	SINE/MIR	(142)	120	32	1908161
17	12.7	0.0	0.0	chr19	57747846	57747871	(869745)	+	(T)n	Simple_repeat	1	26	(0)	1908255
2187	4.8	10.6	0.0	chr19	57770154	57770424	(847192)	C	AluSx	SINE/Alu	(9)	303	1	1908290
3248	17.8	2.2	7.3	chr19	57820086	57820814	(796802)	C	LTR8	LTR/ERV1	(0)	691	1	1908383
1815	15.5	2.3	0.7	chr19	57866761	57867056	(750560)	+	AluSz	SINE/Alu	1	301	(11)	1908466
2301	7.8	4.8	0.0	chr19	57972881	57973175	(644441)	+	AluSg	SINE/Alu	1	310	(0)	1908643
2626	6.5	0.0	0.0	chr19	57973444	57973750	(643866)	+	AluY	SINE/Alu	1	307	(4)	1908644
194	34.8	6.1	0.0	chr19	58003132	58003223	(614393)	C	MIR	SINE/MIR	(45)	217	120	1908686
400	36.3	8.8	1.1	chr19	58181731	58182087	(435529)	+	L1M5	LINE/L1	4061	4447	(1699)	1909056
323	24.5	8.1	6.4	chr19	58200102	58200210	(417406)	C	L2a	LINE/L2	(10)	3416	3306	1909099
568	22.5	4.2	0.0	chr19	58200236	58200373	(417243)	C	MER3	DNA/hAT-Charlie	(65)	144	1	1909100
3638	6.1	5.0	3.9	chr19	58277944	58278458	(339158)	+	MER41C	LTR/ERV1	1	521	(0)	1909251
191	10.5	9.5	0.0	chr2	1281164	1281563	(240911966)	+	(TG)n	Simple_repeat	1	438	(0)	1912067
2190	11.2	1.0	0.7	chr2	1569541	1569843	(240623686)	+	AluSz	SINE/Alu	2	305	(7)	1912316
408	28.2	9.0	0.0	chr2	8693145	8693275	(233500254)	C	L2a	LINE/L2	(0)	3426	3283	1921742
454	23.6	16.0	0.4	chr2	8693651	8693897	(233499632)	+	LTR50	LTR/ERVL	502	794	(1)	1921743
399	11.5	14.5	6.2	chr2	10120423	10120535	(232072994)	+	FLAM_C	SINE/Alu	12	135	(8)	1924224
1784	7.8	0.5	0.0	chr2	10537279	10537497	(231656032)	+	AluSx	SINE/Alu	82	301	(11)	1924934
915	20.1	0.0	0.0	chr2	15742522	15742685	(226450844)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	517	1933230
284	19.1	0.0	0.0	chr2	15742686	15742727	(226450802)	+	AluSc8	SINE/Alu	135	176	(135)	1933231
4374	24.8	10.0	11.0	chr2	15742728	15742797	(226450732)	C	L1MD2	LINE/L1	(1706)	4351	4248	1933228
1545	20.5	2.9	0.0	chr2	15742798	15743111	(226450418)	C	AluJr	SINE/Alu	(0)	312	1	1933232
4900	21.4	1.9	2.4	chr2	15743112	15744440	(226449089)	C	L1MD2	LINE/L1	(2297)	4247	2926	1933228
189	28.8	6.3	0.0	chr2	18559523	18559581	(223633948)	+	MIR	SINE/MIR	200	262	(0)	1937637
11	26.9	3.3	3.2	chr2	18560106	18560166	(223633363)	+	(CAGCCC)n	Simple_repeat	1	63	(0)	1937638
15	21.9	0.0	2.3	chr2	23940659	23940702	(218252827)	+	G-rich	Low_complexity	1	44	(0)	1945146
1599	16.4	9.6	0.4	chr2	24514521	24514794	(217678735)	+	AluJb	SINE/Alu	1	302	(10)	1946297
2305	10.9	0.0	0.3	chr2	24790922	24791224	(217402305)	C	AluSz	SINE/Alu	(10)	302	1	1946746
12	19.6	3.9	5.6	chr2	25042722	25042773	(217150756)	+	(GCG)n	Simple_repeat	1	54	(0)	1947189
33	11.7	0.0	0.0	chr2	26033106	26033153	(216160376)	+	(A)n	Simple_repeat	1	48	(0)	1949187
23	16.2	2.0	0.0	chr2	26033766	26033814	(216159715)	+	G-rich	Low_complexity	1	50	(0)	1949188
1946	5.8	6.4	4.7	chr2	27134874	27135151	(215058378)	+	AluSp	SINE/Alu	14	296	(17)	1951231
603	22.2	17.8	1.9	chr2	27663086	27663255	(214530274)	C	MIR	SINE/MIR	(54)	208	2	1952208
24	6.5	0.0	0.0	chr2	28692320	28692351	(213501178)	+	(AC)n	Simple_repeat	1	32	(0)	1954019
202	22.1	10.5	0.0	chr2	30165534	30165601	(212027928)	+	MIRb	SINE/MIR	90	165	(103)	1956472
2503	5.8	0.3	0.0	chr2	32165212	32165503	(210028026)	C	AluSz	SINE/Alu	(18)	294	2	1959677
255	33.8	9.4	1.9	chr2	32165504	32165604	(210027925)	+	MIRb	SINE/MIR	107	221	(47)	1959676
1929	18.5	0.0	1.0	chr2	32432475	32432777	(209760752)	+	AluJb	SINE/Alu	1	300	(12)	1960305
1339	28.1	13.7	3.1	chr2	32432778	32433279	(209760250)	C	L2a	LINE/L2	(539)	2880	2295	1960303
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
13	18.2	0.0	0.0	chr2	36598022	36598052	(205595477)	+	(CCGCCT)n	Simple_repeat	1	31	(0)	1966234
29	18.0	4.3	0.0	chr2	36598163	36598232	(205595297)	+	(CGCCC)n	Simple_repeat	1	73	(0)	1966235
1718	7.2	0.0	0.0	chr2	36724022	36724229	(205469300)	C	AluSq4	SINE/Alu	(16)	295	88	1966437
1788	12.5	0.7	7.8	chr2	38600445	38600764	(203592765)	+	AluJb	SINE/Alu	1	297	(15)	1969541
232	32.2	6.3	6.9	chr2	38600765	38600832	(203592697)	C	MIRc	SINE/MIR	(192)	76	8	1969540
17	6.8	6.5	0.0	chr2	38602153	38602183	(203591346)	+	(CGC)n	Simple_repeat	1	33	(0)	1969542
16	10.8	3.3	0.0	chr2	38602456	38602485	(203591044)	+	(GCC)n	Simple_repeat	1	31	(0)	1969543
6649	17.4	2.4	2.4	chr2	39814145	39815063	(202378466)	C	L1PA15	LINE/L1	(3325)	3441	2533	1971778
12	15.3	2.4	7.0	chr2	42493992	42494033	(199699496)	+	(CGG)n	Simple_repeat	1	43	(0)	1975681
445	30.0	3.7	5.8	chr2	44166027	44166175	(198027354)	C	MER5A	DNA/hAT-Charlie	(32)	157	3	1978726
293	7.9	0.0	0.0	chr2	44166350	44166387	(198027142)	+	THE1D-int	LTR/ERVL-MaLR	1466	1503	(128)	1978728
10170	11.4	3.1	3.5	chr2	44891372	44893008	(197300521)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	3	1979905
17	8.1	0.0	0.0	chr2	46617235	46617260	(195576269)	+	(CTG)n	Simple_repeat	1	26	(0)	1982534
28	0.0	0.0	0.0	chr2	47905403	47905429	(194288100)	+	(CCCG)n	Simple_repeat	1	27	(0)	1985041
62	27.1	0.0	0.0	chr2	47905518	47905677	(194287852)	+	(GGC)n	Simple_repeat	1	160	(0)	1985042
12	24.1	0.0	0.0	chr2	47906000	47906033	(194287496)	+	GA-rich	Low_complexity	1	34	(0)	1985043
18	0.0	0.0	0.0	chr2	47906067	47906089	(194287440)	+	(GCG)n	Simple_repeat	1	23	(0)	1985044
15	27.3	1.6	3.2	chr2	47906142	47906203	(194287326)	+	G-rich	Low_complexity	1	63	(0)	1985045
13	17.9	7.4	3.5	chr2	48314247	48314300	(193879229)	+	(GCC)n	Simple_repeat	1	58	(0)	1985746
16	8.5	4.9	4.7	chr2	48314620	48314660	(193878869)	+	G-rich	Low_complexity	1	43	(0)	1985747
14	23.3	0.0	2.4	chr2	48314663	48314704	(193878825)	+	(TGC)n	Simple_repeat	1	42	(0)	1985748
1798	17.4	3.3	0.7	chr2	48331534	48331831	(193861698)	+	AluJo	SINE/Alu	1	306	(6)	1985781
580	28.4	6.6	4.5	chr2	49031685	49031905	(193161624)	+	MIRb	SINE/MIR	43	268	(0)	1986914
10295	13.8	1.4	3.5	chr2	52949351	52951015	(189242514)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	3	1991922
1870	13.5	1.6	3.5	chr2	54117283	54117593	(188075936)	C	AluJr	SINE/Alu	(7)	305	1	1993804
238	21.2	9.9	4.0	chr2	54117594	54117620	(188075909)	C	Charlie2b	DNA/hAT-Charlie	(606)	2176	2150	1993802
877	21.8	8.5	10.5	chr2	54117651	54117773	(188075756)	C	Charlie2a	DNA/hAT-Charlie	(2550)	311	207	1993805
1955	8.5	0.3	1.7	chr2	54117774	54118060	(188075469)	C	L1PB1	LINE/L1	(2)	6149	5867	1993806
3624	22.5	13.7	8.2	chr2	55035135	55036319	(187157210)	+	L1ME2	LINE/L1	2763	4015	(2304)	1995156
2357	10.8	0.7	0.0	chr2	55036320	55036624	(187156905)	+	AluSz6	SINE/Alu	1	307	(5)	1995164
3624	22.5	13.7	8.2	chr2	55036625	55037289	(187156240)	+	L1ME2	LINE/L1	4016	4730	(1589)	1995156
1881	15.2	2.0	0.0	chr2	55281739	55282027	(186911502)	+	AluSx1	SINE/Alu	1	295	(17)	1995634
12	10.4	6.1	2.9	chr2	55419886	55419918	(186773611)	+	(CCCG)n	Simple_repeat	1	35	(0)	1995872
18	12.4	0.0	2.7	chr2	55420095	55420131	(186773398)	+	(GGCGCG)n	Simple_repeat	1	37	(0)	1995873
1862	14.9	2.4	2.8	chr2	55629118	55629406	(186564123)	C	AluJb	SINE/Alu	(24)	288	1	1996277
187	33.6	4.6	2.8	chr2	56185888	56185994	(186007535)	+	OldhAT1	DNA/hAT-Ac	1847	1955	(893)	1997105
11287	9.4	1.3	0.4	chr2	58210497	58212062	(183981467)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	1999476
1771	17.5	0.7	0.7	chr2	58530633	58530923	(183662606)	+	AluJr	SINE/Alu	7	297	(15)	1999929
945	18.1	0.9	15.0	chr2	58530924	58530987	(183662542)	+	MER58B	DNA/hAT-Charlie	123	176	(165)	1999927
2363	8.9	0.0	1.7	chr2	58530988	58531289	(183662240)	+	AluSp	SINE/Alu	1	297	(16)	1999930
3436	24.7	4.4	1.4	chr2	60183264	60184618	(182008911)	+	L1MC3	LINE/L1	151	1640	(5111)	2002085
1020	18.2	1.2	0.0	chr2	61441142	61441300	(180752229)	C	AluJo	SINE/Alu	(14)	298	138	2004322
848	19.7	3.1	1.1	chr2	61441643	61441861	(180751668)	+	AluJb	SINE/Alu	119	312	(0)	2004318
5972	14.4	3.2	2.8	chr2	61441862	61442898	(180750631)	+	L1MA5A	LINE/L1	6145	7207	(509)	2004310
17	25.1	0.0	0.0	chr2	61538196	61538242	(180655287)	+	(GCTGCC)n	Simple_repeat	1	47	(0)	2004523
1832	17.2	1.3	2.3	chr2	61970906	61971115	(180222414)	C	AluJb	SINE/Alu	(6)	306	99	2005586
3691	7.3	1.6	1.0	chr2	61971116	61971625	(180221904)	C	LTR10D	LTR/ERV1	(0)	513	1	2005587
2195	11.4	0.3	0.0	chr2	62273090	62273379	(179920150)	C	AluSz	SINE/Alu	(21)	291	1	2006162
679	15.5	0.0	0.1	chr2	62273380	62273490	(179920039)	C	MLT2B1	LTR/ERVL	(29)	538	390	2006161
3722	17.4	7.5	4.7	chr2	62273492	62274315	(179919214)	+	MER21C	LTR/ERVL	1	934	(4)	2006163
4597	14.2	9.3	0.0	chr2	62291205	62291946	(179901583)	+	LTR8B	LTR/ERV1	1	818	(2)	2006205
21	26.4	1.6	0.0	chr2	62705943	62706005	(179487524)	+	(CGG)n	Simple_repeat	1	64	(0)	2006892
17259	13.8	2.5	2.7	chr2	62879592	62881415	(179312114)	+	L1PA15	LINE/L1	5013	6784	(1)	2007133
11	14.1	0.0	8.1	chr2	63050325	63050361	(179143168)	+	G-rich	Low_complexity	1	37	(0)	2007375
1783	17.0	1.3	4.6	chr2	63126660	63126982	(179066547)	C	AluJo	SINE/Alu	(0)	312	1	2007472
5503	11.0	2.9	2.0	chr2	63137244	63138074	(179055455)	C	L1PA13	LINE/L1	(669)	5494	4644	2007490
794	28.2	6.4	1.4	chr2	63138095	63138375	(179055154)	C	L1M5	LINE/L1	(341)	5783	5488	2007492
2053	13.0	5.0	1.6	chr2	63824006	63824373	(178369156)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	2008397
1909	13.4	3.6	2.9	chr2	63824374	63824563	(178368966)	+	AluJo	SINE/Alu	112	308	(4)	2008396
3385	13.7	5.6	0.5	chr2	63888279	63888852	(178304677)	C	MER6A	DNA/TcMar-Tigger	(0)	605	1	2008498
1561	24.4	17.5	0.5	chr2	63889034	63889584	(178303945)	C	L2a	LINE/L2	(1269)	2150	1487	2008497
14	14.6	5.0	2.4	chr2	64767982	64768028	(177425501)	+	(CGCCCG)n	Simple_repeat	1	48	(0)	2009902
18	6.8	3.2	0.0	chr2	66434175	66434205	(175759324)	+	(CCGCG)n	Simple_repeat	1	32	(0)	2012777
21618	9.0	2.1	1.6	chr2	67150659	67154474	(175039055)	+	L1MA1	LINE/L1	3881	7721	(0)	2013683
226	31.2	9.4	4.5	chr2	67177476	67177676	(175015853)	+	L2	LINE/L2	2142	2353	(1066)	2013713
830	21.9	6.2	0.0	chr2	67177688	67177883	(175015646)	C	LTR16C	LTR/ERVL	(5)	484	276	2013714
357	21.9	7.3	0.7	chr2	68910089	68910232	(173283297)	+	L1M5	LINE/L1	4553	4718	(1428)	2016251
11139	27.2	7.3	4.5	chr2	69259320	69259641	(172933888)	+	ERV3-16A3_I-int	LTR/ERVL	707	1040	(4186)	2016749
6817	9.0	18.6	0.5	chr2	69259642	69260677	(172932852)	+	MER11A	LTR/ERVK	1	1266	(0)	2016752
13	25.4	0.0	4.0	chr2	69386870	69386919	(172806610)	+	(CCCCGC)n	Simple_repeat	1	50	(0)	2016982
13	26.3	1.7	3.4	chr2	69387003	69387060	(172806469)	+	(CGGCCCC)n	Simple_repeat	1	59	(0)	2016983
16	18.9	2.9	7.0	chr2	69387229	69387297	(172806232)	+	(CCGCCGC)n	Simple_repeat	1	71	(0)	2016984
1538	16.2	0.9	2.1	chr2	69684482	69684715	(172508814)	+	AluJb	SINE/Alu	82	312	(0)	2017526
654	32.8	4.3	8.3	chr2	69684748	69685179	(172508350)	+	L3	LINE/CR1	2385	2798	(1301)	2017527
320	23.5	8.4	2.0	chr2	70190408	70190507	(172003022)	C	MIRb	SINE/MIR	(43)	225	119	2018609
1424	12.9	2.8	1.4	chr2	70278894	70279103	(171914426)	+	AluJb	SINE/Alu	82	294	(18)	2018792
308	34.2	3.8	13.2	chr2	70588183	70588321	(171605208)	C	L1MD	LINE/L1	(1896)	4250	4127	2019332
410	31.7	1.6	0.8	chr2	70900986	70901106	(171292423)	C	L2b	LINE/L2	(2)	3373	3252	2019792
333	11.8	1.9	0.0	chr2	71277402	71277452	(170916077)	+	MER31A	LTR/ERV1	353	404	(81)	2020407
2166	8.3	3.2	0.4	chr2	71331191	71331467	(170862062)	C	AluSx	SINE/Alu	(27)	285	1	2020505
192	24.1	3.6	1.8	chr2	71331496	71331550	(170861979)	C	L2a	LINE/L2	(226)	3161	3106	2020499
18	9.1	5.3	2.5	chr2	73385805	73385842	(168807687)	+	(CTC)n	Simple_repeat	1	40	(0)	2023643
19	20.3	0.0	2.1	chr2	73385843	73385850	(168807679)	+	(CTCCCC)n	Simple_repeat	3	48	(0)	2023644
51	2.0	0.0	0.0	chr2	73385904	73385953	(168807576)	+	(GGA)n	Simple_repeat	1	50	(0)	2023645
12	31.9	0.0	0.0	chr2	73385981	73386030	(168807499)	+	(GAGGTG)n	Simple_repeat	1	50	(0)	2023646
263	32.9	4.2	6.9	chr2	73987622	73987794	(168205735)	+	MIR3	SINE/MIR	16	183	(25)	2024583
12	8.8	4.2	0.0	chr2	74529647	74529670	(167663859)	+	(CGC)n	Simple_repeat	1	25	(0)	2025528
753	20.5	17.0	1.6	chr2	74957630	74958057	(167235472)	+	Charlie1b	DNA/hAT-Charlie	9	243	(280)	2026249
9092	12.1	3.0	1.1	chr2	75527779	75529177	(166664352)	+	L1PB1	LINE/L1	59	1485	(5378)	2027110
15	27.0	2.6	3.9	chr2	79512709	79512784	(162680745)	+	(CGCCC)n	Simple_repeat	1	78	(0)	2032400
59	23.1	2.1	3.6	chr2	79513228	79513417	(162680112)	+	(CCTC)n	Simple_repeat	1	194	(0)	2032401
2059	11.4	4.3	0.0	chr2	84926401	84926690	(157266839)	C	AluSx1	SINE/Alu	(9)	303	1	2039690
193	17.1	0.0	5.4	chr2	85354208	85354244	(156839285)	C	MIR3	SINE/MIR	(59)	149	115	2040584
181	32.4	2.8	4.5	chr2	85354217	85354326	(156839203)	C	MIR1_Amn	SINE/MIR	(83)	147	40	2040585
17	12.3	2.7	2.6	chr2	85354466	85354502	(156839027)	+	(CAG)n	Simple_repeat	1	38	(0)	2040586
14	0.0	0.0	0.0	chr2	86337684	86337701	(155855828)	+	(GGC)n	Simple_repeat	1	18	(0)	2042490
792	23.4	0.6	0.0	chr2	87343215	87343385	(154850144)	C	L1MB2	LINE/L1	(341)	5830	5659	2044112
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
295	28.4	13.9	0.0	chr2	95022275	95022429	(147171100)	+	MIRb	SINE/MIR	77	256	(12)	2050081
19	20.4	0.0	3.7	chr2	95345722	95345775	(146847754)	+	G-rich	Low_complexity	1	54	(0)	2050548
5368	20.7	6.5	3.7	chr2	97935677	97936999	(144256530)	+	L1M4	LINE/L1	2	1364	(6153)	2054304
12	14.4	7.5	2.3	chr2	97995381	97995420	(144198109)	+	(CCCGG)n	Simple_repeat	1	43	(0)	2054371
12	24.2	5.5	1.7	chr2	97995711	97995765	(144197764)	+	(CGG)n	Simple_repeat	1	58	(0)	2054372
12	22.2	4.8	0.0	chr2	97995801	97995842	(144197687)	+	(CGTG)n	Simple_repeat	1	44	(0)	2054373
11	27.2	2.0	2.0	chr2	97995932	97995981	(144197548)	+	G-rich	Low_complexity	1	51	(0)	2054374
182	29.7	6.2	4.2	chr2	100242960	100243054	(141950475)	+	OldhAT1	DNA/hAT-Ac	2522	2618	(230)	2057594
336	20.0	0.0	3.2	chr2	100730343	100730404	(141463125)	+	MLT1J	LTR/ERVL-MaLR	116	175	(337)	2058418
2580	6.6	0.0	0.0	chr2	100730829	100731130	(141462399)	+	AluSp	SINE/Alu	1	302	(11)	2058419
3126	19.8	11.1	2.3	chr2	101138303	101139060	(141054469)	C	MER21C	LTR/ERVL	(5)	933	9	2059039
18	12.2	0.0	0.0	chr2	101139311	101139337	(141054192)	+	(A)n	Simple_repeat	1	27	(0)	2059040
368	32.9	7.1	5.8	chr2	101139570	101139864	(141053665)	+	L2b	LINE/L2	2919	3214	(161)	2059041
17721	14.3	3.1	1.3	chr2	101583692	101586754	(140606775)	C	L1MA4	LINE/L1	(11)	7708	4573	2059854
13	19.6	7.4	1.7	chr2	102619492	102619545	(139573984)	+	(GCGCC)n	Simple_repeat	1	58	(0)	2061316
300	16.4	4.3	5.6	chr2	102619870	102619940	(139573589)	C	L1MD2	LINE/L1	(6069)	478	409	2061317
14	18.3	2.7	0.0	chr2	102736724	102736760	(139456769)	+	(TCCTGTC)n	Simple_repeat	1	38	(0)	2061466
323	18.8	1.5	0.0	chr2	103455950	103456013	(138737516)	+	MLT2B5	LTR/ERVL	1	65	(652)	2062347
2141	21.6	3.0	2.2	chr2	103456015	103456502	(138737027)	+	Ricksha_c	DNA/MULE-MuDR	414	905	(1143)	2062348
404	22.8	7.1	1.9	chr2	103456813	103456973	(138736556)	C	Charlie7	DNA/hAT-Charlie	(3)	2609	2440	2062349
20	10.8	0.0	0.0	chr2	104473987	104474016	(137719513)	+	(GA)n	Simple_repeat	1	30	(0)	2063569
630	27.1	15.1	1.9	chr2	105038783	105039207	(137154322)	C	L2	LINE/L2	(876)	2543	2053	2064312
9170	9.1	0.1	0.2	chr2	105990256	105991451	(136202078)	+	HERVK14-int	LTR/ERVK	1	1195	(4901)	2065757
2417	7.7	0.3	0.3	chr2	108618545	108618844	(133574685)	+	AluSc	SINE/Alu	1	300	(9)	2069539
13	15.4	2.5	4.9	chr2	113583676	113583715	(128609814)	+	G-rich	Low_complexity	1	41	(0)	2077016
1110	21.6	15.1	0.3	chr2	117814109	117814401	(124379128)	C	MER2	DNA/TcMar-Tigger	(0)	345	2	2082798
31	17.6	0.0	0.0	chr2	119759821	119759879	(122433650)	+	GA-rich	Low_complexity	1	59	(0)	2085916
20	3.7	0.0	0.0	chr2	119760531	119760558	(122432971)	+	(AAAC)n	Simple_repeat	1	28	(0)	2085917
1363	26.5	9.8	8.5	chr2	120641839	120642674	(121550855)	C	HAL1	LINE/L1	(927)	1580	733	2087325
1293	24.4	13.1	7.2	chr2	120642685	120643226	(121550303)	C	MLT1G1	LTR/ERVL-MaLR	(0)	579	1	2087327
4352	16.1	7.0	7.3	chr2	121013900	121014582	(121178947)	+	L1MB5	LINE/L1	5121	5815	(829)	2087889
2014	16.2	0.7	0.0	chr2	121014583	121014890	(121178639)	C	AluJb	SINE/Alu	(2)	310	1	2087892
2306	10.6	0.0	0.0	chr2	121718446	121718738	(120474791)	+	AluSx1	SINE/Alu	2	294	(18)	2089193
294	25.0	0.0	0.0	chr2	121718826	121718885	(120474644)	C	AluYb9	SINE/Alu	(128)	190	131	2089194
36645	7.8	1.2	0.1	chr2	127370373	127375395	(114818134)	+	HERVK22-int	LTR/ERVK	1	5078	(1759)	2097328
14	9.1	5.1	4.9	chr2	127701853	127701891	(114491638)	+	(GCGCTG)n	Simple_repeat	1	41	(0)	2097840
13130	14.2	2.6	3.4	chr2	127820039	127822528	(114371001)	+	HUERS-P3-int	LTR/ERV1	1099	3701	(5218)	2098055
11610	13.5	5.3	2.2	chr2	128051463	128053629	(114139900)	C	L1PB1	LINE/L1	(3965)	2898	459	2098547
2672	7.9	17.0	10.6	chr2	128053630	128054111	(114139418)	C	LTR12F	LTR/ERV1	(0)	519	1	2098553
14	12.2	5.3	2.5	chr2	128091278	128091315	(114102214)	+	(CCTGC)n	Simple_repeat	1	40	(0)	2098653
282	28.6	5.6	4.8	chr2	129308724	129308848	(112884681)	C	L2c	LINE/L2	(8)	3379	3254	2100306
4781	9.9	28.5	0.7	chr2	130327708	130328610	(111864919)	+	LTR12D	LTR/ERV1	1	1254	(0)	2101664
15	18.3	0.0	2.6	chr2	135531567	135531621	(106661908)	+	(CCCGC)n	Simple_repeat	1	53	(0)	2109150
17	15.5	4.7	0.0	chr2	135531859	135531901	(106661628)	+	(GGCTGC)n	Simple_repeat	1	45	(0)	2109151
13	23.3	0.0	0.0	chr2	135532005	135532039	(106661490)	+	(GCT)n	Simple_repeat	1	35	(0)	2109152
351	29.5	0.0	1.0	chr2	137920143	137920238	(104273291)	C	L2c	LINE/L2	(43)	3344	3250	2112718
17	0.0	3.2	6.2	chr2	138501746	138501781	(103691748)	+	(GCC)n	Simple_repeat	1	34	(0)	2113519
15	21.8	4.8	3.1	chr2	138501781	138501842	(103691687)	+	(CGGAGC)n	Simple_repeat	1	65	(0)	2113520
18	25.0	3.2	1.5	chr2	138501836	138501898	(103691631)	+	(GCG)n	Simple_repeat	1	65	(0)	2113521
16	4.0	3.9	0.0	chr2	139478749	139478774	(102714755)	+	(AAAT)n	Simple_repeat	1	27	(0)	2114883
224	31.9	0.0	1.4	chr2	139478801	139478873	(102714656)	C	L2c	LINE/L2	(13)	3413	3342	2114884
1156	27.1	13.2	3.7	chr2	139600619	139601136	(102592393)	C	LTR80A	LTR/ERVL	(2)	581	7	2115031
18	20.3	2.2	0.0	chr2	142130769	142130813	(100062716)	+	(CGG)n	Simple_repeat	1	46	(0)	2118372
349	27.7	8.7	14.2	chr2	143218284	143218662	(98974867)	C	L1ME5	LINE/L1	(0)	6194	5839	2119795
20	17.8	5.2	4.9	chr2	147844275	147844351	(94349178)	+	(CTCCG)n	Simple_repeat	1	81	(0)	2125790
34	5.3	0.0	0.0	chr2	147844401	147844440	(94349089)	+	(GCC)n	Simple_repeat	1	40	(0)	2125791
17	9.4	5.7	0.0	chr2	147844537	147844571	(94348958)	+	(GAGCCCG)n	Simple_repeat	1	37	(0)	2125792
36	19.1	3.3	1.1	chr2	147844582	147844672	(94348857)	+	(GCC)n	Simple_repeat	1	94	(0)	2125793
13	18.9	0.0	0.0	chr2	147844750	147844779	(94348750)	+	(GCC)n	Simple_repeat	1	30	(0)	2125794
14	9.0	4.9	7.0	chr2	147844870	147844910	(94348619)	+	(TTG)n	Simple_repeat	1	43	(0)	2125795
19	24.0	0.0	0.0	chr2	147844944	147844987	(94348542)	+	(TT)n	Simple_repeat	1	44	(0)	2125796
28	0.0	0.0	0.0	chr2	147845001	147845027	(94348502)	+	(T)n	Simple_repeat	1	27	(0)	2125797
12	30.3	0.0	2.0	chr2	147845236	147845285	(94348244)	+	(GCT)n	Simple_repeat	1	50	(0)	2125798
15	13.9	0.0	0.0	chr2	147845343	147845366	(94348163)	+	(C)n	Simple_repeat	1	24	(0)	2125799
11793	9.6	2.3	3.5	chr2	148361719	148363237	(93830292)	+	L1PA7	LINE/L1	1	1558	(4903)	2126542
376	26.4	0.8	3.2	chr2	148733333	148733457	(93460072)	C	MER58C	DNA/hAT-Charlie	(1)	214	93	2127061
1754	15.3	3.2	0.4	chr2	148733480	148733789	(93459740)	C	AluJo	SINE/Alu	(0)	312	1	2127062
1188	17.6	0.0	0.0	chr2	150796874	150797055	(91396474)	C	AluJo	SINE/Alu	(0)	312	131	2129881
918	18.4	3.1	0.6	chr2	150797174	150797331	(91396198)	+	AluJr	SINE/Alu	138	299	(13)	2129882
11	7.5	6.7	3.1	chr2	151500460	151500489	(90693040)	+	(AATATA)n	Simple_repeat	1	32	(0)	2130991
2123	14.7	0.0	1.0	chr2	151500586	151500898	(90692631)	C	AluJb	SINE/Alu	(2)	310	1	2130992
1388	15.3	25.6	6.4	chr2	152113528	152113903	(90079626)	+	L1MB5	LINE/L1	4885	5332	(851)	2131884
583	25.1	9.6	2.5	chr2	152472456	152472696	(89720833)	+	MER46C	DNA/TcMar-Tigger	79	338	(0)	2132489
560	21.3	7.5	2.9	chr2	152472753	152472908	(89720621)	+	MIRb	SINE/MIR	58	219	(43)	2132490
870	21.5	2.4	0.0	chr2	153568219	153568381	(88625148)	C	AluJb	SINE/Alu	(9)	303	137	2133890
2067	7.5	0.3	0.9	chr2	153871945	153872268	(88321261)	+	LTR12D	LTR/ERV1	4	325	(929)	2134207
4151	10.0	1.9	2.7	chr2	156253846	156254516	(85939013)	+	L1PA13	LINE/L1	4660	5325	(821)	2137181
31	0.0	0.0	0.0	chr2	156342363	156342391	(85851138)	+	(CCCCCGG)n	Simple_repeat	1	29	(0)	2137294
15	8.8	5.0	4.8	chr2	156436293	156436332	(85757197)	+	G-rich	Low_complexity	1	42	(0)	2137474
4514	29.8	2.0	2.2	chr2	157106945	157108484	(85085045)	+	L1PBa	LINE/L1	7	1543	(5320)	2138311
13	14.7	3.3	0.0	chr2	157628876	157628905	(84564624)	+	G-rich	Low_complexity	1	31	(0)	2138967
1791	16.4	2.2	2.2	chr2	158142525	158142886	(84050643)	+	L1MB3	LINE/L1	5794	6155	(28)	2139760
14	27.7	1.7	1.7	chr2	158457049	158457106	(83736423)	+	G-rich	Low_complexity	1	59	(0)	2140159
21	4.2	0.0	0.0	chr2	159712088	159712112	(82481417)	+	(A)n	Simple_repeat	1	25	(0)	2142018
12	16.9	2.9	2.8	chr2	159712267	159712301	(82481228)	+	(GCCA)n	Simple_repeat	1	36	(0)	2142019
336	23.6	13.8	0.7	chr2	160683519	160683663	(81509866)	C	HAL1ME	LINE/L1	(2246)	219	53	2143435
350	31.4	5.5	0.0	chr2	160683668	160683788	(81509741)	C	LTR33B	LTR/ERVL	(0)	503	376	2143437
242	27.3	4.3	6.4	chr2	160683988	160684081	(81509448)	C	LTR33B	LTR/ERVL	(324)	179	88	2143437
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
14	15.2	5.2	6.6	chr2	162074155	162074212	(80119317)	+	(GCGGC)n	Simple_repeat	1	61	(0)	2145198
285	29.5	4.0	2.7	chr2	162074388	162074537	(80118992)	C	MIR3	SINE/MIR	(25)	183	32	2145199
1853	12.9	0.0	3.6	chr2	162304192	162304469	(79889060)	+	AluJb	SINE/Alu	15	282	(30)	2145535
547	27.8	20.0	3.9	chr2	162304581	162305281	(79888248)	+	L1ME4b	LINE/L1	5417	6119	(5)	2145536
15	30.4	2.5	2.4	chr2	163348534	163348613	(78844916)	+	(CTGCTT)n	Simple_repeat	1	82	(0)	2146828
1798	14.8	8.9	3.4	chr2	164967964	164968314	(77225215)	C	MER57E1	LTR/ERV1	(0)	372	1	2149043
553	31.7	9.4	0.0	chr2	168160516	168160736	(74032793)	C	MIR	SINE/MIR	(11)	251	8	2153147
315	24.2	2.1	0.0	chr2	168160937	168161031	(74032498)	+	L1MC5a	LINE/L1	2623	2719	(58)	2153148
1679	17.0	6.1	0.7	chr2	169532138	169532431	(72661098)	+	AluJb	SINE/Alu	1	311	(1)	2155104
1708	20.9	4.3	8.7	chr2	169532432	169532671	(72660858)	+	L1MC5a	LINE/L1	2061	2266	(511)	2155103
1753	17.1	0.3	2.3	chr2	171123526	171123834	(71069695)	+	AluJo	SINE/Alu	1	303	(9)	2157827
9467	18.6	6.9	5.5	chr2	171123835	171125725	(71067804)	C	Cheshire	DNA/hAT-Charlie	(307)	2113	127	2157823
30	5.6	0.0	0.0	chr2	171160967	171161003	(71032526)	+	(GCG)n	Simple_repeat	1	37	(0)	2157913
2150	13.8	0.0	0.3	chr2	171179812	171180116	(71013413)	+	AluSz	SINE/Alu	1	304	(8)	2157955
1319	11.6	0.0	2.2	chr2	171180117	171180161	(71013368)	+	AluSx1	SINE/Alu	137	178	(134)	2157954
201	23.9	0.0	0.0	chr2	171999102	171999147	(70194382)	C	L2c	LINE/L2	(38)	3349	3304	2159419
19	28.0	1.2	4.8	chr2	172102783	172102876	(70090653)	+	G-rich	Low_complexity	1	90	(0)	2159595
6085	10.9	1.8	1.4	chr2	172185003	172186463	(70007066)	C	L1PA16	LINE/L1	(10)	6156	4691	2159771
3332	16.6	1.1	3.3	chr2	172186464	172187169	(70006360)	C	L1M4	LINE/L1	(816)	7325	6635	2159772
1513	29.5	10.6	10.4	chr2	173929289	173930293	(68263236)	C	MLT1I-int	LTR/ERVL-MaLR	(5)	1382	402	2162389
14	15.0	5.4	0.0	chr2	174248642	174248678	(67944851)	+	(GCCCC)n	Simple_repeat	1	39	(0)	2162948
1121	23.1	0.0	1.3	chr2	175233154	175233377	(66960152)	C	MER58A	DNA/hAT-Charlie	(0)	224	4	2164523
11	11.7	7.3	4.5	chr2	177264340	177264380	(64929149)	+	(CCCTGC)n	Simple_repeat	1	44	(0)	2167360
30	17.0	4.0	1.3	chr2	177264625	177264698	(64928831)	+	(CGG)n	Simple_repeat	1	77	(0)	2167361
18	17.8	2.2	2.1	chr2	178072727	178072772	(64120757)	+	(GCT)n	Simple_repeat	1	47	(0)	2168498
1835	9.1	0.4	3.6	chr2	178413242	178413494	(63780035)	C	AluSp	SINE/Alu	(67)	246	2	2169048
4128	9.8	3.1	1.9	chr2	179057698	179058329	(63135200)	C	MER51C	LTR/ERV1	(0)	640	1	2169674
455	18.6	1.1	0.0	chr2	179058334	179058419	(63135110)	C	MER51A	LTR/ERV1	(547)	87	1	2169675
669	15.2	0.9	0.0	chr2	179058421	179058532	(63134997)	+	AluJb	SINE/Alu	199	311	(1)	2169673
14	15.4	2.6	2.6	chr2	179058755	179058792	(63134737)	+	GA-rich	Low_complexity	1	39	(0)	2169676
13189	18.6	7.5	2.5	chr2	179188651	179191597	(63001932)	+	L1PA14	LINE/L1	3675	6862	(2)	2169826
16	26.4	1.9	0.0	chr2	179264284	179264337	(62929192)	+	G-rich	Low_complexity	1	55	(0)	2169918
26	24.9	0.0	4.5	chr2	179264569	179264659	(62928870)	+	(GGC)n	Simple_repeat	1	86	(0)	2169919
14	12.6	0.0	7.5	chr2	179264814	179264853	(62928676)	+	G-rich	Low_complexity	1	40	(0)	2169920
227	25.7	12.8	1.8	chr2	179264958	179265068	(62928461)	+	MIRc	SINE/MIR	2	126	(142)	2169921
203	30.9	4.3	4.3	chr2	179804816	179804930	(62388599)	+	L2b	LINE/L2	3037	3151	(224)	2170659
856	28.6	12.5	2.4	chr2	179804987	179805438	(62388091)	+	MLT1G1	LTR/ERVL-MaLR	76	579	(0)	2170660
17487	14.2	3.0	1.6	chr2	180215484	180219061	(61974468)	+	L1PA15	LINE/L1	2354	5964	(201)	2171213
203	27.9	7.6	4.7	chr2	180411626	180411689	(61781840)	+	L2a	LINE/L2	3322	3387	(39)	2171439
908	31.2	7.3	2.0	chr2	180524552	180525169	(61668360)	+	L2a	LINE/L2	2738	3426	(0)	2171568
17	21.4	0.0	2.2	chr2	180873432	180873476	(61320053)	+	(GGC)n	Simple_repeat	1	45	(0)	2172010
18337	12.5	3.5	1.6	chr2	180873555	180875820	(61317709)	+	L1MA3	LINE/L1	2339	4611	(2954)	2172009
26	13.6	5.8	2.7	chr2	181891874	181891942	(60301587)	+	(CCTCCT)n	Simple_repeat	1	73	(0)	2173262
25	26.4	0.0	4.4	chr2	181891943	181891962	(60301567)	+	(CCCTCC)n	Simple_repeat	2	90	(0)	2173263
21	8.9	0.0	2.6	chr2	181892203	181892211	(60301318)	+	(CGAGGA)n	Simple_repeat	1	37	(0)	2173264
18	7.6	0.0	0.0	chr2	181892212	181892239	(60301290)	+	(AGG)n	Simple_repeat	1	28	(0)	2173265
902	21.5	7.0	2.6	chr2	182832592	182832863	(59360666)	C	MER65B	LTR/ERV1	(16)	515	231	2174519
389	18.8	3.4	1.2	chr2	182832909	182832994	(59360535)	C	MER65B	LTR/ERV1	(373)	88	1	2174519
909	17.7	0.7	0.7	chr2	182833012	182833158	(59360371)	C	AluJo	SINE/Alu	(30)	282	136	2174520
12	19.7	4.7	2.2	chr2	183037942	183037984	(59155545)	+	(CCCGC)n	Simple_repeat	1	45	(0)	2174822
19	23.7	2.5	4.8	chr2	183038303	183038383	(59155146)	+	(CAGCCCC)n	Simple_repeat	1	83	(0)	2174823
26	0.0	0.0	0.0	chr2	183038418	183038442	(59155087)	+	(GGC)n	Simple_repeat	1	25	(0)	2174824
16	15.2	2.0	6.0	chr2	183038554	183038602	(59154927)	+	(GGCCCT)n	Simple_repeat	1	50	(0)	2174825
1439	25.1	9.6	4.8	chr2	184439527	184439953	(57753576)	C	L1MC	LINE/L1	(2587)	3559	3083	2176549
1680	16.2	0.8	0.8	chr2	184439954	184440218	(57753311)	C	AluJb	SINE/Alu	(45)	267	3	2176550
1439	25.5	9.9	4.7	chr2	184440219	184440650	(57752879)	C	L1MC	LINE/L1	(3064)	3082	2635	2176549
9741	13.1	3.4	3.7	chr2	185346885	185348467	(56845062)	+	THE1B-int	LTR/ERVL-MaLR	1	1578	(2)	2177667
11274	10.8	0.8	0.0	chr2	186352623	186354190	(55839339)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2178932
18	20.2	3.9	0.0	chr2	186693990	186694040	(55499489)	+	(CTCCTC)n	Simple_repeat	1	53	(0)	2179447
13	18.3	2.6	2.5	chr2	186694092	186694138	(55499391)	+	(CGCCGCC)n	Simple_repeat	1	47	(0)	2179448
24	22.8	0.0	0.0	chr2	186694300	186694356	(55499173)	+	(CAG)n	Simple_repeat	1	57	(0)	2179449
16009	11.7	3.3	2.1	chr2	187655491	187659192	(54534337)	+	MER61-int	LTR/ERV1	2866	6899	(289)	2180644
2028	13.4	5.9	0.0	chr2	187659193	187659513	(54534016)	+	MER61A	LTR/ERV1	1	341	(0)	2180644
14	14.9	2.4	4.8	chr2	188291953	188291993	(53901536)	+	G-rich	Low_complexity	1	42	(0)	2181474
16266	10.0	1.8	1.7	chr2	189677811	189680874	(52512655)	C	L1PB2	LINE/L1	(369)	5782	2706	2183201
28	3.3	0.0	0.0	chr2	190534906	190534936	(51658593)	+	(CGGCCT)n	Simple_repeat	1	31	(0)	2184502
29	3.2	0.0	0.0	chr2	191678404	191678435	(50515094)	+	(T)n	Simple_repeat	1	32	(0)	2186263
2902	11.3	19.1	2.3	chr2	192117522	192118046	(50075483)	+	MER51A	LTR/ERV1	1	634	(0)	2186845
11172	11.4	0.7	1.0	chr2	195105044	195106740	(47086789)	+	L1PA15	LINE/L1	3677	5368	(778)	2190469
4692	24.5	5.4	2.2	chr2	196586302	196587818	(45605711)	C	Charlie25	DNA/hAT-Charlie	(812)	1712	145	2192627
7727	19.9	4.3	3.6	chr2	196652154	196653792	(45539737)	C	MSTB-int	LTR/ERVL-MaLR	(0)	1651	1	2192735
1736	15.5	8.9	0.4	chr2	197525456	197525733	(44667796)	+	AluJr4	SINE/Alu	3	306	(6)	2194221
184	27.4	1.6	1.6	chr2	197525740	197525802	(44667727)	C	L2a	LINE/L2	(5)	3421	3359	2194222
228	26.1	9.8	3.2	chr2	197641119	197641241	(44552288)	C	MER102a	DNA/hAT-Charlie	(2)	328	197	2194409
5062	11.6	1.4	2.4	chr2	197686164	197687439	(44506090)	C	L1PB2	LINE/L1	(116)	6035	4783	2194488
24	28.1	0.0	0.0	chr2	197687441	197687504	(44506025)	+	(TT)n	Simple_repeat	1	64	(0)	2194490
27	0.0	3.5	0.0	chr2	197687515	197687543	(44505986)	+	(CTTTTT)n	Simple_repeat	1	30	(0)	2194491
26780	1.9	0.1	0.0	chr2	197687547	197693561	(44499968)	C	L1PA2	LINE/L1	(13)	6142	124	2194492
417	30.9	5.5	10.7	chr2	197887784	197887828	(44305701)	C	L1ME4b	LINE/L1	(688)	204	179	2194728
1801	14.6	7.0	0.0	chr2	197887829	197888108	(44305421)	+	AluJb	SINE/Alu	1	301	(11)	2194730
417	30.9	5.5	10.7	chr2	197888109	197888293	(44305236)	C	L1ME4b	LINE/L1	(714)	178	7	2194728
14	24.0	6.1	1.4	chr2	199458317	199458382	(42735147)	+	GA-rich	Low_complexity	1	70	(0)	2196848
12	11.6	3.3	3.2	chr2	199458751	199458780	(42734749)	+	(CCCA)n	Simple_repeat	1	31	(0)	2196849
18	12.2	6.4	2.0	chr2	199911313	199911359	(42282170)	+	(CGCCGGC)n	Simple_repeat	1	50	(0)	2197519
13	29.3	0.0	0.0	chr2	199911453	199911494	(42282035)	+	(GCT)n	Simple_repeat	1	42	(0)	2197520
315	25.4	6.3	8.5	chr2	199955997	199956125	(42237404)	+	L1MDb	LINE/L1	649	774	(5635)	2197597
22064	8.7	1.1	1.3	chr2	200718552	200722526	(41471003)	+	L1PA14	LINE/L1	2194	6161	(0)	2198740
1750	16.8	2.7	0.0	chr2	200746905	200747189	(41446340)	+	AluJb	SINE/Alu	3	295	(17)	2198774
6062	9.3	1.3	4.3	chr2	201461470	201462145	(40731384)	C	L1MA3	LINE/L1	(780)	6785	6106	2200088
20936	12.5	4.4	1.1	chr2	201462144	201463057	(40730472)	C	L1MA3	LINE/L1	(3741)	3824	2858	2200088
17	22.8	0.0	0.0	chr2	201888034	201888069	(40305460)	+	(T)n	Simple_repeat	1	36	(0)	2200773
2157	14.9	0.3	0.0	chr2	202834347	202834647	(39358882)	+	AluJb	SINE/Alu	1	302	(10)	2202771
1277	16.5	0.5	1.6	chr2	202834853	202835046	(39358483)	C	AluJr	SINE/Alu	(34)	278	87	2202772
368	12.7	0.0	7.8	chr2	202835053	202835129	(39358400)	C	L1MA8	LINE/L1	(5)	6286	6216	2202773
13	26.8	1.6	4.7	chr2	205682309	205682371	(36511158)	+	(GCCGC)n	Simple_repeat	1	64	(0)	2207282
21	19.8	0.0	0.0	chr2	205682634	205682679	(36510850)	+	(CAG)n	Simple_repeat	1	46	(0)	2207283
15	21.0	3.9	1.9	chr2	206085225	206085275	(36108254)	+	(CCCGG)n	Simple_repeat	1	53	(0)	2207943
15	10.9	4.4	6.4	chr2	206085808	206085852	(36107677)	+	(GCCC)n	Simple_repeat	1	47	(0)	2207944
18	15.4	6.3	4.5	chr2	207530139	207530201	(34663328)	+	GA-rich	Low_complexity	1	67	(0)	2210181
239	28.8	5.3	1.6	chr2	214809057	214809183	(27384346)	+	MER5A	DNA/hAT-Charlie	58	189	(0)	2220125
19	18.8	2.0	2.0	chr2	214809689	214809738	(27383791)	+	(GGCGG)n	Simple_repeat	1	51	(0)	2220126
624	29.3	12.2	6.3	chr2	216309442	216309904	(25883625)	+	MLT1K	LTR/ERVL-MaLR	102	595	(0)	2222506
267	35.4	3.3	2.0	chr2	217261920	217262069	(24931460)	+	MER5A	DNA/hAT-Charlie	7	158	(31)	2224130
282	20.0	13.3	0.0	chr2	217262085	217262149	(24931380)	+	MER81	DNA/hAT-Blackjack	37	111	(3)	2224131
208	30.2	0.0	0.0	chr2	218569386	218569438	(23624091)	C	MIR3	SINE/MIR	(49)	159	107	2226394
297	33.9	9.7	3.0	chr2	218569504	218569771	(23623758)	+	L2a	LINE/L2	2791	3078	(341)	2226391
24	19.4	1.8	0.0	chr2	218961298	218961352	(23232177)	+	(CTCTCT)n	Simple_repeat	1	56	(0)	2227117
10838	8.8	5.3	3.3	chr2	219200448	219201991	(22991538)	C	LTR12C	LTR/ERV1	(0)	1579	3	2227518
2223	12.9	0.0	0.0	chr2	221532120	221532422	(20661107)	C	AluSx	SINE/Alu	(9)	303	1	2231207
2483	8.0	0.0	0.3	chr2	222866152	222866439	(19327090)	C	AluYm1	SINE/Alu	(18)	293	7	2233371
570	22.7	12.2	5.3	chr2	222866440	222866589	(19326940)	C	MIR	SINE/MIR	(92)	170	16	2233370
24	12.1	2.2	0.0	chr2	222866739	222866744	(19326785)	+	(GCCCC)n	Simple_repeat	1	45	(0)	2233372
30	5.5	0.0	0.0	chr2	222866745	222866782	(19326747)	+	(C)n	Simple_repeat	1	38	(0)	2233373
2500	11.6	0.0	0.0	chr2	222866823	222867132	(19326397)	C	AluSg	SINE/Alu	(0)	310	1	2233374
2689	6.0	0.0	0.3	chr2	224735955	224736252	(17457277)	C	AluY	SINE/Alu	(13)	298	2	2236496
12202	10.7	1.2	1.2	chr2	224736253	224737296	(17456233)	+	MSTA-int	LTR/ERVL-MaLR	599	1631	(0)	2236495
2639	14.1	12.6	0.4	chr2	224849856	224850345	(17343184)	+	MER41E	LTR/ERV1	1	558	(37)	2236651
13	5.3	0.0	0.0	chr2	227472177	227472196	(14721333)	+	(GGC)n	Simple_repeat	1	20	(0)	2240577
2067	15.5	0.7	0.0	chr2	227553216	227553512	(14640017)	+	AluJb	SINE/Alu	1	299	(13)	2240691
3188	15.3	6.6	0.5	chr2	230956937	230957502	(11236027)	C	MER44C	DNA/TcMar-Tigger	(30)	703	101	2245969
13	18.2	0.0	0.0	chr2	230957504	230957534	(11235995)	+	G-rich	Low_complexity	1	31	(0)	2245970
43	0.0	0.0	0.0	chr2	230987475	230987513	(11206016)	+	(CAGGGC)n	Simple_repeat	1	39	(0)	2246024
772	19.2	3.7	0.0	chr2	231541860	231542015	(10651514)	+	MLT1F	LTR/ERVL-MaLR	5	166	(382)	2247088
4421	15.6	3.2	2.7	chr2	231542022	231542880	(10650649)	+	L1MB3	LINE/L1	5319	6182	(1)	2247089
300	22.1	5.8	6.6	chr2	235002751	235002807	(7190722)	C	MIR3	SINE/MIR	(123)	85	28	2252896
19	0.0	0.0	0.0	chr2	236692290	236692310	(5501219)	+	(A)n	Simple_repeat	1	21	(0)	2255351
13	22.9	2.1	4.2	chr2	237291388	237291434	(4902095)	+	(TTCTC)n	Simple_repeat	1	48	(0)	2256186
204	31.0	13.1	0.0	chr2	237325852	237325964	(4867565)	+	MIRc	SINE/MIR	101	230	(38)	2256229
215	33.3	2.2	2.2	chr2	237421535	237421623	(4771906)	C	L2a	LINE/L2	(1)	3425	3337	2256323
241	27.8	8.5	2.7	chr2	237421795	237421905	(4771624)	+	HAL1	LINE/L1	276	393	(2114)	2256324
1582	21.1	8.8	5.5	chr2	237422184	237422634	(4770895)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	2256325
16	21.0	4.5	4.3	chr2	238689800	238689866	(3503663)	+	GA-rich	Low_complexity	1	70	(0)	2258121
293	33.0	0.0	3.9	chr2	239002892	239002995	(3190534)	C	L1MEi	LINE/L1	(2108)	104	5	2258487
357	23.0	1.4	1.0	chr2	239003005	239003102	(3190427)	C	MamGypLTR1a	LTR/Gypsy	(51)	752	653	2258488
859	24.1	4.4	2.9	chr2	239003352	239003595	(3189934)	C	MamGypLTR1a	LTR/Gypsy	(517)	267	20	2258488
507	27.1	4.5	0.6	chr2	239446545	239446715	(2746814)	C	L1ME3B	LINE/L1	(305)	5937	5760	2258929
45	4.2	0.0	0.0	chr2	240025167	240025216	(2168313)	+	(CCACCCCG)n	Simple_repeat	1	50	(0)	2259594
2829	13.9	11.8	6.9	chr2	240867735	240868312	(1325217)	C	MER4B	LTR/ERV1	(0)	610	1	2260475
815	22.0	9.5	2.0	chr2	240868335	240868538	(1324991)	+	MER58A	DNA/hAT-Charlie	4	224	(0)	2260476
11	24.3	4.0	1.9	chr2	241102477	241102526	(1091003)	+	(GCCGCA)n	Simple_repeat	1	52	(0)	2260683
328	32.6	11.4	2.0	chr2	241279402	241279701	(913828)	+	L1ME3G	LINE/L1	4644	4975	(1171)	2260903
500	27.5	5.6	3.8	chr2	241279700	241279911	(913618)	+	L1ME3Cz	LINE/L1	321	536	(461)	2260909
12	13.1	2.7	5.3	chr2	241895821	241895857	(297672)	+	(GGCACAT)n	Simple_repeat	1	38	(0)	2261828
2405	21.2	5.1	6.5	chr2	241970681	241971299	(222230)	+	LTR71B	LTR/ERV1	1	610	(0)	2261908
1245	18.6	2.6	5.8	chr2	241971479	241971791	(221738)	+	MLT1A0	LTR/ERVL-MaLR	1	303	(62)	2261909
1762	19.4	1.6	0.3	chr20	1194948	1195246	(63248921)	+	AluJo	SINE/Alu	1	303	(9)	2264588
1633	16.6	15.9	2.0	chr20	1195247	1195533	(63248634)	C	MLT1A1	LTR/ERVL-MaLR	(81)	327	1	2264587
19	23.3	3.3	0.0	chr20	3407968	3408027	(61036140)	+	(CCCGG)n	Simple_repeat	1	62	(0)	2268793
685	35.1	14.0	6.8	chr20	3630468	3630916	(60813251)	+	L3	LINE/CR1	577	1077	(3022)	2269228
1716	15.6	1.8	2.8	chr20	3630917	3631249	(60812918)	C	AluJr	SINE/Alu	(0)	312	1	2269229
685	35.1	14.0	6.8	chr20	3631250	3631431	(60812736)	+	L3	LINE/CR1	1078	1264	(2835)	2269228
1313	11.3	6.5	0.0	chr20	4092207	4092392	(60351775)	C	AluJr	SINE/Alu	(10)	302	104	2270106
1865	18.6	3.1	3.1	chr20	8453811	8454198	(55989969)	+	MLT1B	LTR/ERVL-MaLR	1	388	(2)	2277288
747	28.7	15.9	1.5	chr20	8454199	8454629	(55989538)	C	L2a	LINE/L2	(384)	3035	2524	2277287
898	25.2	10.4	4.4	chr20	8454653	8454993	(55989174)	+	L2a	LINE/L2	3063	3426	(0)	2277289
788	29.4	5.8	2.5	chr20	10314831	10315112	(54129055)	C	LTR16E2	LTR/ERVL	(14)	554	263	2280324
539	25.5	15.0	5.1	chr20	10590884	10591176	(53852991)	+	MER102a	DNA/hAT-Charlie	2	328	(2)	2280793
269	27.9	5.5	4.4	chr20	10591177	10591191	(53852976)	+	L3b	LINE/CR1	5014	5025	(207)	2280792
24	27.4	2.1	3.1	chr20	10673536	10673629	(53770538)	+	(CGC)n	Simple_repeat	1	96	(0)	2280873
14344	17.3	3.3	1.5	chr20	15996550	15998557	(48445610)	C	L1MA9	LINE/L1	(824)	5316	3270	2288722
13	11.2	14.6	0.0	chr20	18138192	18138239	(46305928)	+	(TGCGGC)n	Simple_repeat	1	55	(0)	2292194
11	16.9	2.9	2.8	chr20	19757216	19757250	(44686917)	+	(TCTGTT)n	Simple_repeat	1	36	(0)	2294578
42	7.7	6.7	3.2	chr20	19758154	19758242	(44685925)	+	(CCT)n	Simple_repeat	1	95	(0)	2294579
14	20.5	0.0	2.4	chr20	19758513	19758553	(44685614)	+	G-rich	Low_complexity	1	41	(0)	2294580
2369	7.5	1.0	5.6	chr20	20016623	20016944	(44427223)	C	AluSz	SINE/Alu	(5)	307	1	2295062
2015	12.1	0.3	0.3	chr20	20874214	20874495	(43569672)	+	AluJb	SINE/Alu	1	282	(30)	2296226
30	0.0	0.0	0.0	chr20	20874496	20874523	(43569644)	+	(AAAACA)n	Simple_repeat	1	28	(0)	2296227
513	26.8	4.4	6.7	chr20	20874824	20875152	(43569015)	C	L1ME3B	LINE/L1	(98)	6064	5754	2296228
1518	25.9	14.8	0.7	chr20	21095712	21096127	(43348040)	+	LTR16C	LTR/ERVL	3	487	(2)	2296596
226	20.7	11.9	5.1	chr20	21096171	21096287	(43347880)	C	MLT1J1	LTR/ERVL-MaLR	(4)	370	245	2296597
581	27.9	13.0	4.9	chr20	21096261	21096527	(43347640)	C	MLT1J1	LTR/ERVL-MaLR	(115)	329	38	2296597
252	6.8	18.5	0.0	chr20	25407154	25407197	(39036970)	+	MIR	SINE/MIR	79	132	(130)	2302119
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
6839	15.2	3.0	9.0	chr20	29450038	29451222	(34992945)	+	Tigger1	DNA/TcMar-Tigger	1312	2418	(0)	2304133
1013	18.2	0.6	0.0	chr20	29451228	29451392	(34992775)	C	AluJo	SINE/Alu	(10)	302	137	2304135
2448	5.4	0.4	0.0	chr20	29451395	29451700	(34992467)	C	AluY	SINE/Alu	(0)	311	1	2304136
14160	17.3	2.7	0.8	chr20	29506023	29508253	(34935914)	C	L1MA6	LINE/L1	(510)	7209	4937	2304212
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
16	20.9	0.0	0.0	chr20	30377144	30377176	(34066991)	+	(C)n	Simple_repeat	1	33	(0)	2304972
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
24	25.2	2.7	1.3	chr20	31514352	31514424	(32929743)	+	(GC)n	Simple_repeat	1	75	(0)	2306155
13	10.0	5.9	2.8	chr20	31880001	31880034	(32564133)	+	G-rich	Low_complexity	1	36	(0)	2307086
28	3.3	0.0	0.0	chr20	31880262	31880292	(32563875)	+	(TCCA)n	Simple_repeat	1	31	(0)	2307087
278	28.6	8.2	0.9	chr20	31880297	31880409	(32563758)	C	L2b	LINE/L2	(0)	3375	3254	2307088
2437	5.5	1.4	0.0	chr20	31880497	31880786	(32563381)	C	AluSc	SINE/Alu	(15)	294	1	2307089
2216	8.6	0.0	0.0	chr20	34207808	34208076	(30236091)	C	AluYc	SINE/Alu	(30)	269	1	2312522
6994	14.4	6.0	2.0	chr20	34208077	34208345	(30235822)	C	L1MA4	LINE/L1	(1258)	4885	4602	2312517
1903	16.4	0.6	1.3	chr20	34208346	34208656	(30235511)	C	AluJb	SINE/Alu	(3)	309	1	2312523
15	4.8	0.0	0.0	chr20	34216182	34216203	(30227964)	+	(GCAA)n	Simple_repeat	1	22	(0)	2312528
14	5.0	0.0	0.0	chr20	34216252	34216272	(30227895)	+	(CGC)n	Simple_repeat	1	21	(0)	2312529
1616	25.4	9.5	0.5	chr20	34216376	34216932	(30227235)	C	L1MEg	LINE/L1	(925)	5221	4610	2312530
201	26.9	1.5	4.3	chr20	34300930	34300999	(30143168)	+	L2c	LINE/L2	3310	3377	(10)	2312716
221	29.1	8.8	3.7	chr20	34301087	34301193	(30142974)	C	MIR3	SINE/MIR	(48)	160	48	2312717
2151	9.9	0.7	1.3	chr20	34515892	34516194	(29927973)	C	AluJo	SINE/Alu	(11)	301	1	2313239
367	32.1	9.3	4.4	chr20	34516788	34516992	(29927175)	C	MIR	SINE/MIR	(9)	253	38	2313240
356	29.9	0.0	1.0	chr20	35171639	35171736	(29272431)	+	MIR3	SINE/MIR	43	139	(69)	2314693
15	26.6	0.0	0.0	chr20	35171904	35171948	(29272219)	+	GA-rich	Low_complexity	1	45	(0)	2314694
14	6.0	4.8	9.1	chr20	35171998	35172039	(29272128)	+	(CCT)n	Simple_repeat	1	44	(0)	2314695
297	23.2	12.5	6.7	chr20	35306927	35307046	(29137121)	C	MIR3	SINE/MIR	(23)	185	58	2314973
280	26.2	6.2	6.2	chr20	36465309	36465487	(27978680)	C	MIRc	SINE/MIR	(71)	197	19	2317694
20	13.4	0.0	4.4	chr20	36863794	36863838	(27580329)	+	GA-rich	Low_complexity	1	45	(0)	2318641
14	10.5	6.5	0.0	chr20	36863902	36863932	(27580235)	+	(CCT)n	Simple_repeat	1	33	(0)	2318642
11	10.3	2.7	7.9	chr20	37479996	37480032	(26964135)	+	(CTCTGC)n	Simple_repeat	1	38	(0)	2320117
882	30.1	12.4	4.4	chr20	37486945	37487230	(26956937)	+	L2b	LINE/L2	2002	2292	(1127)	2320131
272	29.4	8.4	9.1	chr20	37506025	37506420	(26937747)	+	L2	LINE/L2	1902	2294	(1125)	2320167
249	28.7	9.3	2.5	chr20	41302199	41302330	(23141837)	+	MIR3	SINE/MIR	25	171	(97)	2327324
507	24.3	15.5	1.6	chr20	41302662	41302916	(23141251)	+	MLT1J1	LTR/ERVL-MaLR	154	444	(0)	2327325
1822	15.8	4.4	0.0	chr20	41790050	41790213	(22653954)	C	AluSz6	SINE/Alu	(14)	298	134	2328113
45	0.0	0.0	0.0	chr20	41790214	41790254	(22653913)	+	(T)n	Simple_repeat	1	41	(0)	2328114
1822	15.8	4.4	0.0	chr20	41790255	41790374	(22653793)	C	AluSz6	SINE/Alu	(192)	120	1	2328113
439	25.6	7.4	0.1	chr20	45294095	45294254	(19149913)	+	MIRb	SINE/MIR	15	185	(77)	2335323
910	20.6	3.1	0.0	chr20	45694351	45694598	(18749569)	+	L1MB5	LINE/L1	2302	2557	(3589)	2336057
2173	20.9	10.0	7.2	chr20	45694601	45695341	(18748826)	+	MER21C	LTR/ERVL	11	871	(67)	2336058
280	25.5	8.7	0.0	chr20	46688824	46688917	(17755250)	C	MIR	SINE/MIR	(127)	135	33	2338228
1826	17.6	1.4	1.0	chr20	46702974	46703268	(17740899)	+	AluJb	SINE/Alu	1	296	(16)	2338262
401	22.2	5.4	13.7	chr20	46703269	46703335	(17740832)	C	L2a	LINE/L2	(99)	3327	3254	2338261
12	21.6	4.6	7.7	chr20	46894677	46894763	(17549404)	+	(CCAGCGC)n	Simple_repeat	1	91	(0)	2338725
21	17.6	3.3	3.2	chr20	46894833	46894893	(17549274)	+	(CGGCAG)n	Simple_repeat	1	63	(0)	2338726
19	9.0	0.0	12.9	chr20	46894899	46894960	(17549207)	+	(GCCC)n	Simple_repeat	1	62	(0)	2338727
20	20.7	0.0	0.0	chr20	47514182	47514220	(16929947)	+	(T)n	Simple_repeat	1	39	(0)	2340319
416	25.9	7.4	10.8	chr20	47514240	47514395	(16929772)	+	Charlie15b	DNA/hAT-Charlie	798	971	(90)	2340320
1764	13.5	2.1	2.1	chr20	47514396	47514676	(16929491)	C	AluSz	SINE/Alu	(14)	298	18	2340321
416	25.9	7.4	10.8	chr20	47514677	47514705	(16929462)	+	Charlie15b	DNA/hAT-Charlie	972	990	(71)	2340320
1899	12.5	10.3	0.0	chr20	47514706	47514984	(16929183)	C	AluSx1	SINE/Alu	(1)	311	1	2340322
763	19.9	0.4	0.6	chr20	48516181	48516442	(15927725)	+	D20S16	Satellite	13096	13453	(6)	2342240
254	27.6	6.0	8.4	chr20	48516332	48516485	(15927682)	+	MLT2B4	LTR/ERVL	282	431	(125)	2342258
17	25.9	6.0	1.1	chr20	49277930	49278013	(15166154)	+	G-rich	Low_complexity	1	89	(0)	2344005
11	26.9	4.1	0.0	chr20	49278136	49278158	(15166009)	+	(GGCGGA)n	Simple_repeat	1	50	(0)	2344006
13	13.2	0.0	0.0	chr20	49278159	49278183	(15165984)	+	(GAG)n	Simple_repeat	1	25	(0)	2344007
838	20.1	3.2	0.0	chr20	50460474	50460652	(13983515)	+	MER20	DNA/hAT-Charlie	1	185	(34)	2346997
205	32.1	9.9	0.0	chr20	50516345	50516453	(13927714)	+	MIR3	SINE/MIR	53	173	(35)	2347145
326	29.0	5.2	4.5	chr20	50791106	50791271	(13652896)	C	MER5A	DNA/hAT-Charlie	(2)	187	7	2347743
2126	12.1	0.7	1.9	chr20	51115670	51115840	(13328327)	+	AluJb	SINE/Alu	137	303	(9)	2348442
314	37.0	2.4	0.0	chr20	51115939	51116103	(13328064)	+	MIRc	SINE/MIR	10	178	(90)	2348445
1552	16.9	6.1	8.2	chr20	54057578	54057931	(10386236)	+	MLT1B	LTR/ERVL-MaLR	1	346	(44)	2354941
218	34.0	1.0	2.0	chr20	54643796	54643894	(9800273)	+	MER5A	DNA/hAT-Charlie	50	147	(42)	2356082
813	21.2	0.7	13.9	chr20	54643947	54644119	(9800048)	+	MER5A	DNA/hAT-Charlie	17	189	(0)	2356083
1414	12.6	4.3	0.0	chr20	55197883	55198104	(9246063)	C	L1PREC2	LINE/L1	(1141)	5005	4774	2357011
2258	8.2	0.0	0.0	chr20	55198105	55198409	(9245758)	+	L1PA12	LINE/L1	5864	6168	(0)	2357012
2820	20.7	5.4	5.3	chr20	56933517	56933871	(7510296)	C	Tigger17a	DNA/TcMar-Tigger	(0)	654	307	2360204
1924	15.2	0.7	2.3	chr20	56933872	56934180	(7509987)	C	AluJb	SINE/Alu	(8)	304	1	2360205
320	27.4	9.5	4.6	chr20	57514184	57514313	(6929854)	+	MIRc	SINE/MIR	12	148	(120)	2361336
19	3.5	0.0	3.2	chr20	58652611	58652641	(5791526)	+	(GTTTT)n	Simple_repeat	1	31	(0)	2363301
13	15.9	2.7	2.6	chr20	58890745	58890781	(5553386)	+	(CCACCG)n	Simple_repeat	1	38	(0)	2363582
16	23.9	0.0	2.4	chr20	58890782	58890822	(5553345)	+	(TG)n	Simple_repeat	1	41	(0)	2363583
2372	8.2	0.0	0.0	chr20	58980597	58980889	(5463278)	C	AluSz	SINE/Alu	(19)	293	1	2363760
239	6.7	0.0	0.0	chr20	58980914	58980943	(5463224)	C	ORSL	DNA/hAT-Tip100	(184)	91	62	2363757
189	24.4	0.0	0.0	chr20	58980963	58981003	(5463164)	C	MIRc	SINE/MIR	(115)	153	113	2363761
628	33.6	0.8	4.1	chr20	59490474	59490718	(4953449)	C	MIR	SINE/MIR	(24)	238	2	2364557
2367	8.3	0.3	1.9	chr20	62276967	62277278	(2166889)	+	AluSx1	SINE/Alu	1	307	(5)	2368382
15	11.9	5.9	5.6	chr20	62367121	62367171	(2076996)	+	(CCGCGC)n	Simple_repeat	1	54	(0)	2368468
392	33.0	7.7	0.0	chr20	62641656	62641834	(1802333)	C	MIR	SINE/MIR	(26)	236	43	2368788
2443	7.1	0.0	0.0	chr20	62862278	62862573	(1581594)	+	AluSg	SINE/Alu	1	296	(14)	2369034
34	22.4	2.7	3.5	chr20	63626742	63626818	(817349)	+	(CGC)n	Simple_repeat	1	104	(10)	2369783
12	12.6	0.0	3.6	chr20	63626819	63626846	(817321)	+	(CCTCC)n	Simple_repeat	1	28	(0)	2369784
278	33.0	0.9	2.6	chr20	64101981	64102095	(342072)	+	MIRb	SINE/MIR	67	179	(89)	2370500
13	4.3	0.0	7.1	chr20	64102346	64102373	(341794)	+	(GCCCC)n	Simple_repeat	1	28	(0)	2370501
2508	17.7	4.2	1.4	chr20	64285514	64286699	(157468)	+	TAR1	Satellite/telo	1	1219	(1436)	2370665
605	6.4	0.9	3.6	chr20	64286700	64287633	(156534)	+	(AGGGTT)n	Simple_repeat	1	942	(0)	2370666
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
312	38.2	6.5	3.6	chr21	8419786	8420171	(38289812)	C	HAL1	LINE/L1	(1230)	1277	880	2373573
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
21	16.7	0.0	2.4	chr21	9819273	9819314	(36890669)	+	(AC)n	Simple_repeat	1	42	(0)	2374898
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
989	28.9	5.1	4.4	chr21	15208517	15209037	(31500946)	+	MamGypLTR1a	LTR/Gypsy	254	778	(6)	2378820
348	34.4	0.8	7.9	chr21	15209046	15209184	(31500799)	+	L2c	LINE/L2	3258	3386	(1)	2378819
477	34.5	12.3	2.5	chr21	16165878	16166198	(30543785)	C	MLT1O	LTR/ERVL-MaLR	(184)	358	2	2380081
1976	10.2	6.0	0.0	chr21	16563381	16563671	(30146312)	C	AluSz	SINE/Alu	(0)	312	1	2380592
1742	21.6	2.4	4.5	chr21	16711653	16711975	(29998008)	C	Charlie4a	DNA/hAT-Charlie	(187)	321	3	2380777
12	5.6	0.0	0.0	chr21	17612698	17612716	(29097267)	+	(CCG)n	Simple_repeat	1	19	(0)	2381936
5198	11.8	3.2	0.5	chr21	28841468	28841820	(17868163)	+	L1PB1	LINE/L1	6509	6866	(1)	2397329
1286	21.7	2.3	1.6	chr21	28841825	28842128	(17867855)	+	MER68	LTR/ERVL	258	563	(0)	2397328
276	34.3	3.8	2.9	chr21	28842129	28842233	(17867750)	+	MIRb	SINE/MIR	163	268	(0)	2397334
1111	14.8	8.7	0.9	chr21	28914290	28914521	(17795462)	C	L1MA9	LINE/L1	(43)	6269	6018	2397439
1893	16.7	0.0	3.5	chr21	28914540	28914856	(17795127)	C	AluJo	SINE/Alu	(6)	306	1	2397440
344	30.6	2.7	6.2	chr21	31531022	31531216	(15178767)	C	CR1-16_AMi	LINE/CR1	(153)	698	511	2401542
12	11.9	0.0	6.5	chr21	31558175	31558205	(15151778)	+	(GCGCA)n	Simple_repeat	1	31	(0)	2401593
13	8.9	10.5	2.4	chr21	31558695	31558732	(15151251)	+	(CCT)n	Simple_repeat	1	42	(0)	2401594
14	15.6	3.4	8.2	chr21	31659922	31659980	(15050003)	+	(GCCCG)n	Simple_repeat	1	61	(0)	2401850
28	20.6	7.3	1.7	chr21	31660030	31660138	(15049845)	+	G-rich	Low_complexity	1	117	(0)	2401851
302	23.0	17.9	0.0	chr21	31660365	31660451	(15049532)	+	MER58C	DNA/hAT-Charlie	49	154	(61)	2401852
13	24.9	0.0	0.0	chr21	31872631	31872668	(14837315)	+	(CCAT)n	Simple_repeat	1	38	(0)	2402247
12	16.6	4.5	4.3	chr21	31872932	31872975	(14837008)	+	(CTCCGCCA)n	Simple_repeat	1	46	(0)	2402248
13	14.9	3.3	0.0	chr21	31873244	31873273	(14836710)	+	(CGG)n	Simple_repeat	1	31	(0)	2402249
11754	9.0	1.2	1.1	chr21	32874481	32876058	(13833925)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	2403916
38	8.0	0.0	0.0	chr21	33070371	33070423	(13639560)	+	(CCT)n	Simple_repeat	1	53	(0)	2404252
18	21.7	3.2	3.1	chr21	33070542	33070603	(13639380)	+	(AGC)n	Simple_repeat	1	64	(0)	2404253
23	27.6	3.6	2.6	chr21	33070735	33070868	(13639115)	+	(GCGCCGG)n	Simple_repeat	1	135	(0)	2404254
724	17.1	0.7	0.0	chr21	33960131	33960270	(12749713)	+	L1MA5	LINE/L1	6003	6143	(157)	2405886
866	13.6	0.0	0.0	chr21	33960271	33960388	(12749595)	C	AluSz6	SINE/Alu	(17)	295	178	2405887
2036	11.8	1.0	5.1	chr21	33960414	33960728	(12749255)	C	AluSx3	SINE/Alu	(9)	302	1	2405888
2124	9.0	7.7	0.0	chr21	34348178	34348465	(12361518)	+	AluJb	SINE/Alu	1	312	(0)	2406469
633	24.5	17.1	2.4	chr21	36972590	36972923	(9737060)	+	MamRep1151	LTR?	34	426	(283)	2410766
1737	16.0	0.0	4.8	chr21	36972934	36973227	(9736756)	+	AluJb	SINE/Alu	1	280	(32)	2410767
26	0.0	0.0	0.0	chr21	36973228	36973252	(9736731)	+	(T)n	Simple_repeat	1	25	(0)	2410768
559	23.4	6.2	2.1	chr21	36973263	36973509	(9736474)	+	L1M5	LINE/L1	5212	5474	(768)	2410769
2165	10.5	0.7	1.3	chr21	37010212	37010517	(9699466)	+	AluSx	SINE/Alu	1	304	(8)	2410849
1961	17.1	0.0	1.3	chr21	37359535	37359850	(9350133)	+	AluJo	SINE/Alu	1	312	(0)	2411454
20	17.6	3.9	0.0	chr21	37359853	37359903	(9350080)	+	(AACCA)n	Simple_repeat	1	53	(0)	2411455
264	25.0	11.1	0.0	chr21	37359927	37360046	(9349937)	C	L2c	LINE/L2	(45)	3342	3208	2411449
3186	21.3	9.8	2.9	chr21	37576317	37576969	(9133014)	C	Arthur1	DNA/hAT-Tip100	(4)	3943	3236	2411818
1982	13.6	0.7	1.3	chr21	37576970	37577271	(9132712)	C	AluJr	SINE/Alu	(12)	300	1	2411819
1915	18.2	0.0	0.0	chr21	39170452	39170742	(7539241)	+	AluJb	SINE/Alu	2	292	(20)	2414108
18	9.7	3.0	0.0	chr21	39183299	39183331	(7526652)	+	(CCT)n	Simple_repeat	1	34	(0)	2414124
15	23.2	4.8	1.5	chr21	39183481	39183542	(7526441)	+	(CCCACCG)n	Simple_repeat	1	65	(0)	2414125
821	13.8	0.0	0.0	chr21	39183687	39183802	(7526181)	C	AluJo	SINE/Alu	(196)	116	1	2414126
2137	12.5	1.0	1.4	chr21	43189409	43189704	(3520279)	+	AluJb	SINE/Alu	2	296	(16)	2420046
411	26.9	7.2	1.8	chr21	43189705	43189794	(3520189)	C	L1ME3E	LINE/L1	(96)	6146	6057	2420045
485	29.8	0.8	0.0	chr21	43189808	43189928	(3520055)	C	L2a	LINE/L2	(1)	3425	3304	2420047
2490	9.9	0.0	0.0	chr21	45352229	45352541	(1357442)	+	AluSq2	SINE/Alu	1	313	(0)	2422773
2345	15.9	4.7	1.0	chr21	45596999	45597410	(1112573)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2422977
21	0.0	0.0	0.0	chr21	46099890	46099912	(610071)	+	(T)n	Simple_repeat	1	23	(0)	2423510
2394	7.2	0.7	0.0	chr21	46594011	46594302	(115681)	+	AluY	SINE/Alu	1	294	(17)	2424163
3044	14.0	2.0	8.8	chr21	46594303	46594662	(115321)	+	LTR28C	LTR/ERV1	342	704	(559)	2424162
238	30.9	0.0	6.8	chr21	46594653	46594725	(115258)	+	LTR28C	LTR/ERV1	1062	1129	(0)	2424162
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
3134	12.3	0.8	0.0	chr22	11930604	11931100	(38887368)	+	L1PA13	LINE/L1	5175	5675	(1091)	2425549
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
2091	8.8	6.9	0.0	chr22	18149659	18149942	(32668526)	+	AluSx	SINE/Alu	1	305	(7)	2430308
4341	4.4	0.2	0.0	chr22	18890645	18891207	(31927261)	C	HSATI	Satellite	(10)	567	4	2431162
36	2.7	13.3	0.0	chr22	18891210	18891284	(31927184)	+	(AT)n	Simple_repeat	1	85	(0)	2431163
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
277	30.8	1.7	2.5	chr22	18907337	18907456	(31911012)	C	L1ME2z	LINE/L1	(0)	6444	6326	2431194
194	24.2	10.1	1.6	chr22	21837406	21837468	(28981000)	C	L2	LINE/L2	(1111)	2308	2240	2436013
279	37.4	8.6	0.0	chr22	21982387	21982493	(28835975)	+	MIRb	SINE/MIR	113	229	(39)	2436309
4226	9.0	3.1	5.0	chr22	22235155	22235747	(28582721)	+	LTR71B	LTR/ERV1	27	610	(0)	2436636
12	17.3	5.1	6.5	chr22	24271045	24271103	(26547365)	+	(CGCCCG)n	Simple_repeat	1	62	(0)	2439767
12	21.9	3.5	5.0	chr22	24271090	24271147	(26547321)	+	(CCTGCG)n	Simple_repeat	1	60	(0)	2439768
2417	8.5	0.0	0.4	chr22	24284424	24284733	(26533735)	C	AluY	SINE/Alu	(0)	311	2	2439791
13	17.7	2.9	9.7	chr22	24592966	24593035	(26225433)	+	(GGCCC)n	Simple_repeat	1	72	(0)	2440311
260	11.1	2.2	0.0	chr22	24593461	24593505	(26224963)	+	Alu	SINE/Alu	91	136	(166)	2440312
1266	17.4	0.5	0.5	chr22	24769039	24769252	(26049216)	C	MER2	DNA/TcMar-Tigger	(0)	345	132	2440593
1403	17.9	0.4	2.9	chr22	26364326	26364571	(24453897)	+	AluJb	SINE/Alu	23	262	(50)	2444180
278	33.3	6.8	3.5	chr22	26364693	26364863	(24453605)	C	L2b	LINE/L2	(96)	3279	3103	2444181
566	31.0	6.2	0.7	chr22	26364943	26365167	(24453301)	C	MIRb	SINE/MIR	(10)	258	31	2444182
1377	14.8	9.5	8.3	chr22	26376998	26377287	(24441181)	+	AluJo	SINE/Alu	1	294	(18)	2444212
384	26.7	5.9	8.6	chr22	26377288	26377306	(24441162)	C	L2c	LINE/L2	(221)	3166	3148	2444209
192	21.6	5.1	0.0	chr22	26377310	26377346	(24441122)	+	L2a	LINE/L2	3369	3407	(19)	2444213
198	25.6	0.0	0.0	chr22	26377321	26377359	(24441109)	+	MIR	SINE/MIR	224	262	(0)	2444207
13	25.3	2.3	0.0	chr22	26590116	26590158	(24228310)	+	G-rich	Low_complexity	1	44	(0)	2444695
15	7.8	0.0	3.5	chr22	26590191	26590219	(24228249)	+	(GCCCC)n	Simple_repeat	1	29	(0)	2444696
267	22.8	1.7	0.0	chr22	27346138	27346194	(23472274)	C	MLT1K	LTR/ERVL-MaLR	(0)	595	538	2446501
29	0.0	0.0	0.0	chr22	27786431	27786455	(23032013)	+	(AC)n	Simple_repeat	1	25	(0)	2447522
758	32.8	8.8	5.1	chr22	29856457	29856890	(20961578)	+	L2b	LINE/L2	2932	3383	(4)	2451506
1174	14.6	0.0	0.0	chr22	29927936	29928106	(20890362)	C	AluSx3	SINE/Alu	(7)	304	134	2451658
2009	12.1	1.4	1.1	chr22	29928161	29928471	(20889997)	C	AluSq10	SINE/Alu	(0)	313	1	2451659
16	7.8	0.0	3.5	chr22	30802854	30802882	(20015586)	+	(GGCG)n	Simple_repeat	1	29	(0)	2453437
21	17.4	2.2	0.0	chr22	30803073	30803118	(20015350)	+	(GCG)n	Simple_repeat	1	47	(0)	2453438
31	6.0	0.0	6.7	chr22	30968842	30968901	(19849567)	+	(GCC)n	Simple_repeat	1	60	(0)	2453682
3092	14.2	10.5	2.2	chr22	31393872	31394412	(19424056)	+	LTR12	LTR/ERV1	4	594	(232)	2454693
346	29.2	8.3	3.8	chr22	31990778	31990937	(18827531)	C	MIR3	SINE/MIR	(22)	186	19	2456119
18	18.1	3.9	1.9	chr22	33058470	33058521	(17759947)	+	(ACGCCC)n	Simple_repeat	1	54	(0)	2458292
605	23.3	6.5	0.6	chr22	33209960	33210119	(17608349)	+	MER5B	DNA/hAT-Charlie	8	177	(1)	2458574
2275	11.7	0.0	0.0	chr22	33479746	33480043	(17338425)	C	AluSx	SINE/Alu	(13)	299	2	2459160
10739	11.2	1.5	3.6	chr22	33788408	33790022	(17028446)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2459784
2299	4.8	4.3	0.0	chr22	33882022	33882329	(16936139)	C	AluYm1	SINE/Alu	(0)	311	1	2459980
1981	9.6	2.9	0.0	chr22	33923980	33924250	(16894218)	+	AluSq2	SINE/Alu	23	301	(12)	2460049
1749	17.0	0.7	6.0	chr22	35970367	35970684	(14847784)	+	AluJr	SINE/Alu	1	301	(11)	2464076
14	4.0	7.7	0.0	chr22	36387753	36387778	(14430690)	+	(CCCG)n	Simple_repeat	1	28	(0)	2464883
437	36.6	0.8	5.7	chr22	36855994	36856239	(13962229)	+	MIRb	SINE/MIR	29	262	(6)	2466011
280	34.9	0.9	0.9	chr22	36856164	36856270	(13962198)	C	MIRb	SINE/MIR	(0)	268	162	2466012
4957	16.2	3.5	4.6	chr22	37258622	37259476	(13558992)	+	MER49	LTR/ERV1	78	923	(0)	2466829
309	37.0	4.0	4.4	chr22	37259477	37259499	(13558969)	C	L1MC	LINE/L1	(1215)	4931	4909	2466828
336	21.0	0.0	4.7	chr22	37263824	37263908	(13554560)	+	L2	LINE/L2	1967	2047	(1372)	2466841
1585	26.7	8.7	4.4	chr22	37263909	37264479	(13553989)	C	LTR67B	LTR/ERVL	(0)	620	23	2466842
28	6.8	0.0	5.8	chr22	38336245	38336296	(12482172)	+	(CCCGC)n	Simple_repeat	1	52	(0)	2469301
376	30.9	11.4	5.9	chr22	39255374	39255785	(11562683)	C	L2a	LINE/L2	(2)	3385	2936	2471211
870	11.4	0.0	2.3	chr22	40346118	40346272	(10472196)	C	FLAM_C	SINE/Alu	(0)	143	1	2473376
187	32.8	1.6	0.0	chr22	40346274	40346334	(10472134)	C	MIR	SINE/MIR	(102)	160	99	2473377
15	23.0	1.6	4.8	chr22	40346732	40346792	(10471676)	+	G-rich	Low_complexity	1	62	(0)	2473378
403	35.7	5.8	3.0	chr22	40347027	40347260	(10471208)	C	MIRb	SINE/MIR	(22)	246	6	2473379
517	29.8	2.5	0.8	chr22	41380904	41381086	(9437382)	C	MIR3	SINE/MIR	(15)	193	21	2475777
20	19.4	1.2	8.3	chr22	41381289	41381371	(9437097)	+	(CCCGC)n	Simple_repeat	1	84	(0)	2475778
1559	18.1	1.3	5.0	chr22	41666590	41666777	(9151691)	+	MER2	DNA/TcMar-Tigger	119	304	(41)	2476461
14	20.1	2.5	0.0	chr22	41969497	41969536	(8848932)	+	(GGCCTGG)n	Simple_repeat	1	41	(0)	2477175
208	28.3	5.0	4.2	chr22	42331413	42331530	(8486938)	C	MIRc	SINE/MIR	(141)	127	9	2477815
13	19.5	5.7	3.6	chr22	42340831	42340883	(8477585)	+	GA-rich	Low_complexity	1	56	(0)	2477834
1479	12.4	0.0	2.3	chr22	42572752	42572969	(8245499)	C	AluSx1	SINE/Alu	(99)	213	1	2478411
2387	5.4	0.0	5.4	chr22	42573244	42573559	(8244909)	C	AluY	SINE/Alu	(12)	299	1	2478412
184	34.0	4.1	2.1	chr22	43143535	43143630	(7674838)	+	L2a	LINE/L2	3327	3424	(2)	2479694
1757	16.3	0.0	4.2	chr22	44005100	44005412	(6813056)	C	AluJo	SINE/Alu	(12)	300	1	2481173
15	5.6	0.0	0.0	chr22	44005414	44005432	(6813036)	+	(T)n	Simple_repeat	1	19	(0)	2481174
377	13.8	0.0	3.0	chr22	44005477	44005543	(6812925)	C	AluJb	SINE/Alu	(0)	302	238	2481175
1534	14.0	3.7	1.3	chr22	44005544	44006002	(6812466)	+	MER51A	LTR/ERV1	1	634	(0)	2481176
342	33.3	8.8	2.7	chr22	44421958	44422256	(6396212)	C	L1MEf	LINE/L1	(5943)	457	139	2481920
1995	12.6	0.7	1.1	chr22	44422301	44422628	(6395840)	C	AluSx	SINE/Alu	(0)	312	3	2481928
24	11.9	3.3	4.8	chr22	45010056	45010115	(5808353)	+	(CCCGC)n	Simple_repeat	1	62	(0)	2483037
21	12.8	4.3	6.9	chr22	45010116	45010123	(5808345)	+	(GCCCCC)n	Simple_repeat	2	72	(0)	2483038
287	19.8	10.0	0.0	chr22	45271459	45271539	(5546929)	+	MER3	DNA/hAT-Charlie	120	209	(0)	2483584
252	6.1	0.0	0.0	chr22	45271819	45271851	(5546617)	C	U2	snRNA	(155)	33	1	2483585
203	26.6	5.9	1.5	chr22	45271857	45271921	(5546547)	C	MIR3	SINE/MIR	(64)	144	77	2483586
11	25.3	0.0	4.3	chr22	46737703	46737748	(4080720)	+	(CGCCCCG)n	Simple_repeat	1	46	(0)	2485974
15	17.7	2.6	0.0	chr22	46738006	46738043	(4080425)	+	G-rich	Low_complexity	1	39	(0)	2485975
341	17.9	43.5	0.0	chr22	48813229	48813354	(2005114)	+	HAL1M8	LINE/L1	2791	2971	(20)	2488638
201	35.4	0.0	8.6	chr22	49915670	49915774	(902694)	+	L2a	LINE/L2	3290	3385	(41)	2489954
220	34.6	7.0	1.8	chr22	49915806	49915914	(902554)	+	L2c	LINE/L2	3273	3387	(0)	2489955
213	26.0	8.0	6.3	chr3	4978009	4978119	(193317440)	+	L2c	LINE/L2	3273	3385	(2)	2499892
1148	25.9	8.5	3.8	chr3	8582507	8583175	(189712384)	+	L2a	LINE/L2	2701	3426	(0)	2505621
1430	13.9	4.0	0.0	chr3	8836700	8836914	(189458645)	C	AluJb	SINE/Alu	(4)	308	85	2506028
1574	17.3	9.0	6.9	chr3	9160866	9161312	(189134247)	+	L1MC4	LINE/L1	6985	7441	(601)	2506627
343	27.7	23.3	2.6	chr3	9161394	9161545	(189134014)	C	MIRb	SINE/MIR	(29)	239	47	2506628
227	25.0	5.0	0.0	chr3	10142262	10142337	(188153222)	C	MIRc	SINE/MIR	(121)	147	68	2508745
1065	25.2	6.2	2.5	chr3	12241534	12241940	(186053619)	C	HAL1	LINE/L1	(426)	2081	1659	2512919
3275	20.9	5.3	6.7	chr3	12553039	12553919	(185741640)	+	L1ME3	LINE/L1	3503	4402	(1744)	2513513
2206	15.0	2.5	17.5	chr3	12653751	12653966	(185641593)	+	Tigger2	DNA/TcMar-Tigger	539	744	(1974)	2513736
1916	16.0	1.3	1.0	chr3	12653982	12654287	(185641272)	C	AluJr	SINE/Alu	(5)	307	1	2513740
23	29.8	2.1	2.0	chr3	15859410	15859506	(182436053)	+	(CGC)n	Simple_repeat	1	99	(0)	2519512
34	2.3	2.1	4.1	chr3	15859563	15859610	(182435949)	+	(CGC)n	Simple_repeat	1	49	(0)	2519512
12	12.6	3.7	0.0	chr3	15859664	15859690	(182435869)	+	(CTTC)n	Simple_repeat	1	28	(0)	2519513
15	14.1	0.0	3.0	chr3	15859706	15859738	(182435821)	+	(CCG)n	Simple_repeat	1	33	(0)	2519514
6457	13.2	5.9	1.8	chr3	17000308	17002476	(181293083)	C	L1MA4	LINE/L1	(2)	6298	4037	2521288
14	16.2	0.0	0.0	chr3	19947408	19947435	(178348124)	+	(CGC)n	Simple_repeat	1	28	(0)	2525351
18	17.9	0.0	0.0	chr3	20039916	20039954	(178255605)	+	(CCCCCA)n	Simple_repeat	1	39	(0)	2525554
14	9.6	0.0	0.0	chr3	20040191	20040213	(178255346)	+	(GGC)n	Simple_repeat	1	23	(0)	2525555
15	17.5	0.0	0.0	chr3	20040242	20040274	(178255285)	+	(GCCGCC)n	Simple_repeat	1	33	(0)	2525556
21	22.5	1.2	6.0	chr3	20040468	20040549	(178255010)	+	G-rich	Low_complexity	1	83	(0)	2525557
33	9.0	5.0	0.0	chr3	20040837	20040896	(178254663)	+	(CCCGCCT)n	Simple_repeat	1	63	(0)	2525558
2193	13.1	0.3	0.3	chr3	22697357	22697668	(175597891)	+	AluSz6	SINE/Alu	1	312	(0)	2529083
28	14.5	0.0	0.0	chr3	22697669	22697714	(175597845)	+	(A)n	Simple_repeat	1	46	(0)	2529084
1882	21.8	6.6	0.4	chr3	22697717	22698256	(175597303)	+	L1MB7	LINE/L1	1217	1792	(5725)	2529076
2252	11.5	0.0	0.3	chr3	23729228	23729531	(174566028)	C	AluSz	SINE/Alu	(9)	303	1	2530638
2090	11.0	0.3	7.6	chr3	25640753	25641080	(172654479)	C	AluJb	SINE/Alu	(7)	305	2	2533604
2336	17.6	6.9	12.8	chr3	25859788	25860606	(172434953)	+	MER57A-int	LTR/ERV1	1344	2064	(4123)	2533939
26	6.1	0.0	0.0	chr3	27721915	27721948	(170573611)	+	(GCG)n	Simple_repeat	1	34	(0)	2536643
345	25.4	11.6	3.0	chr3	28241156	28241289	(170054270)	+	L2a	LINE/L2	3279	3425	(1)	2537505
297	27.5	9.0	7.8	chr3	28242097	28242238	(170053321)	C	Charlie4z	DNA/hAT-Charlie	(18)	149	6	2537507
15	19.6	8.2	1.5	chr3	29280643	29280703	(169014856)	+	(CCTT)n	Simple_repeat	1	66	(0)	2538963
180	19.1	0.0	4.5	chr3	29280827	29280870	(169014689)	C	MamRTE1	LINE/RTE-BovB	(437)	3375	3334	2538964
49	27.8	0.0	0.0	chr3	29281115	29281236	(169014323)	+	(TTTT)n	Simple_repeat	1	122	(0)	2538965
16	0.0	4.3	0.0	chr3	29854015	29854037	(168441522)	+	(TTTG)n	Simple_repeat	1	24	(0)	2539752
13	14.9	2.3	6.8	chr3	30606765	30606807	(167688752)	+	(GCGCG)n	Simple_repeat	1	44	(0)	2540793
2270	12.2	7.3	8.6	chr3	30750999	30751484	(167544075)	+	MER51E	LTR/ERV1	1	479	(3)	2541027
20	9.7	0.0	2.8	chr3	31532887	31532922	(166762637)	+	(CCT)n	Simple_repeat	1	36	(0)	2542253
14	18.9	4.5	2.2	chr3	31533127	31533170	(166762389)	+	(GGC)n	Simple_repeat	1	46	(0)	2542254
306	32.8	4.9	7.0	chr3	31533378	31533564	(166761995)	C	L1M4b	LINE/L1	(6287)	580	398	2542255
1041	10.6	0.0	2.1	chr3	31918318	31918459	(166377100)	C	AluJo	SINE/Alu	(4)	308	170	2542857
26	14.1	2.9	4.3	chr3	33114562	33114629	(165180930)	+	(GCCCCG)n	Simple_repeat	1	70	(0)	2545325
689	15.8	0.0	0.0	chr3	33713681	33713781	(164581778)	C	AluJb	SINE/Alu	(9)	303	203	2546309
270	15.0	0.0	0.0	chr3	33713785	33713824	(164581735)	C	AluJr	SINE/Alu	(187)	125	86	2546310
2219	7.4	0.0	0.0	chr3	33717420	33717690	(164577869)	C	AluSg	SINE/Alu	(5)	305	35	2546318
194	32.1	11.0	0.0	chr3	38346163	38346243	(159949316)	+	L2b	LINE/L2	3263	3353	(22)	2552902
1578	14.6	3.7	6.0	chr3	38495741	38496041	(159799518)	+	AluJr	SINE/Alu	1	294	(18)	2553121
181	29.7	21.7	1.9	chr3	38496043	38496145	(159799414)	+	MIRb	SINE/MIR	51	179	(89)	2553122
15	29.1	2.9	1.4	chr3	41199911	41199979	(157095580)	+	G-rich	Low_complexity	1	71	(0)	2557193
7450	9.9	4.4	1.5	chr3	41227730	41229692	(157065867)	C	L1PA15	LINE/L1	(0)	6165	4143	2557224
275	21.5	5.8	0.0	chr3	42582530	42582594	(155712965)	C	L2c	LINE/L2	(0)	3387	3319	2559339
38	0.0	0.0	0.0	chr3	44726231	44726265	(153569294)	+	(AAAT)n	Simple_repeat	1	35	(0)	2562565
1525	16.7	5.5	3.6	chr3	44726266	44726450	(153569109)	+	AluJr	SINE/Alu	138	312	(0)	2562564
263	29.0	16.9	0.0	chr3	44729869	44730030	(153565529)	+	MIRc	SINE/MIR	24	218	(50)	2562571
34	7.0	0.0	0.0	chr3	45225151	45225195	(153070364)	+	(CGG)n	Simple_repeat	1	45	(0)	2563467
211	31.3	4.8	0.0	chr3	46129897	46129995	(152165564)	C	MIR	SINE/MIR	(128)	134	31	2564955
252	30.9	6.8	0.0	chr3	46130201	46130310	(152165249)	C	L2c	LINE/L2	(38)	3349	3232	2564956
1692	15.4	10.4	4.6	chr3	47448033	47448439	(150847120)	C	L1MB5	LINE/L1	(1532)	5012	4578	2567149
3494	24.2	5.3	2.5	chr3	47448438	47449923	(150845636)	C	L1MB5	LINE/L1	(5041)	1599	41	2567149
14	19.2	2.8	0.0	chr3	48847788	48847823	(149447736)	+	(CCG)n	Simple_repeat	1	37	(0)	2570099
229	28.6	7.5	4.8	chr3	49340955	49341057	(148954502)	C	L2c	LINE/L2	(58)	3329	3224	2571125
1868	16.4	0.3	0.0	chr3	49407880	49408178	(148887381)	+	AluSg	SINE/Alu	1	300	(10)	2571295
45	38.5	0.0	1.1	chr3	49408179	49408332	(148887227)	+	(AT)n	Simple_repeat	1	154	(0)	2571296
13	28.0	0.0	0.0	chr3	49940171	49940213	(148355346)	+	(CGGAGG)n	Simple_repeat	1	43	(0)	2572263
6689	9.2	1.2	0.4	chr3	51019461	51021188	(147274371)	C	L1PA11	LINE/L1	(1)	6173	4433	2573847
1973	10.6	1.1	0.7	chr3	51827662	51827946	(146467613)	C	L1PREC2	LINE/L1	(3)	6157	5872	2575034
682	8.9	0.0	17.6	chr3	51827948	51828083	(146467476)	+	MSTA	LTR/ERVL-MaLR	317	428	(0)	2575035
2624	17.1	4.8	1.2	chr3	51884665	51885160	(146410399)	C	MLT2B2	LTR/ERVL	(0)	515	1	2575108
2044	12.0	0.0	8.6	chr3	54830451	54830776	(143464783)	C	AluSx	SINE/Alu	(14)	298	1	2579586
17	21.0	7.0	1.6	chr3	54830963	54831019	(143464540)	+	(TA)n	Simple_repeat	1	61	(0)	2579587
27	13.9	3.6	0.0	chr3	56468325	56468380	(141827179)	+	(GGAGCC)n	Simple_repeat	1	58	(0)	2582184
14	7.2	0.0	8.6	chr3	56468451	56468485	(141827074)	+	G-rich	Low_complexity	1	35	(0)	2582185
945	25.4	8.1	2.6	chr3	58306734	58307373	(139988186)	C	L2a	LINE/L2	(0)	3426	2741	2585764
15	16.5	8.9	1.6	chr3	58332712	58332767	(139962792)	+	(GCGCAG)n	Simple_repeat	1	61	(0)	2585826
1871	15.1	2.9	1.3	chr3	61907846	61908149	(136387410)	+	AluJr	SINE/Alu	3	311	(1)	2591436
2168	8.6	4.8	0.0	chr3	61908157	61908434	(136387125)	+	AluSz	SINE/Alu	14	305	(7)	2591437
2104	12.5	1.7	2.4	chr3	63947304	63947598	(134347961)	+	AluJb	SINE/Alu	1	293	(19)	2594948
459	31.7	6.1	6.1	chr3	63947599	63947703	(134347856)	C	MIR	SINE/MIR	(141)	121	8	2594947
1362	28.1	10.7	3.1	chr3	63947724	63948506	(134347053)	C	L2b	LINE/L2	(201)	3174	2321	2594949
870	22.8	0.0	2.6	chr3	65632926	65633119	(132662440)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	2597732
29	28.1	0.0	1.1	chr3	67654603	67654718	(130640841)	+	GA-rich	Low_complexity	1	114	(0)	2601160
12	19.6	0.0	0.0	chr3	67654708	67654736	(130640823)	+	(GGCCG)n	Simple_repeat	1	29	(0)	2601161
16	21.6	1.7	5.0	chr3	69013317	69013375	(129282184)	+	G-rich	Low_complexity	1	60	(0)	2603323
12	6.8	0.0	12.5	chr3	71581627	71581666	(126713893)	+	(GCCGCT)n	Simple_repeat	1	40	(0)	2607447
16	11.7	8.0	3.7	chr3	71581667	71581675	(126713884)	+	(CGCT)n	Simple_repeat	2	54	(0)	2607448
206	30.9	16.1	0.0	chr3	72013279	72013440	(126282119)	C	L2c	LINE/L2	(358)	3061	2869	2608280
275	29.6	3.8	6.7	chr3	72152378	72152491	(126143068)	C	MER5A	DNA/hAT-Charlie	(17)	172	60	2608581
1470	17.1	2.9	2.2	chr3	73745603	73745913	(124549646)	+	MER58B	DNA/hAT-Charlie	29	341	(0)	2611679
2690	7.1	0.0	0.9	chr3	75639248	75639586	(122655973)	C	LTR17	LTR/ERV1	(0)	780	445	2614530
320	21.9	0.0	9.6	chr3	75668819	75668954	(122626605)	C	LSAU	Satellite	(374)	124	2	2614560
17	0.0	4.0	0.0	chr3	77039266	77039290	(121256269)	+	(TTTCC)n	Simple_repeat	1	26	(0)	2616365
18	27.6	1.2	4.7	chr3	77039727	77039811	(121255748)	+	(CCCCT)n	Simple_repeat	1	86	(0)	2616366
34	7.0	0.0	0.0	chr3	77040050	77040094	(121255465)	+	(CCCT)n	Simple_repeat	1	45	(0)	2616367
1965	29.1	4.0	11.0	chr3	77660363	77661383	(120634176)	+	MLT1B-int	LTR/ERVL-MaLR	405	1351	(20)	2617132
13	13.3	6.1	0.0	chr3	80125844	80125876	(118169683)	+	(TTATT)n	Simple_repeat	1	35	(0)	2620369
15167	14.6	2.0	3.3	chr3	82994440	82996114	(115299445)	+	L1MA3	LINE/L1	4346	5984	(321)	2624078
36	25.1	0.0	1.0	chr3	84958994	84959090	(113336469)	+	(GCCGCC)n	Simple_repeat	1	97	(0)	2626424
22	14.6	0.0	4.1	chr3	87226914	87226962	(111068597)	+	(AAC)n	Simple_repeat	1	49	(0)	2629278
18	9.8	3.0	0.0	chr3	87227477	87227509	(111068050)	+	(GGGCC)n	Simple_repeat	1	34	(0)	2629279
2922	21.0	3.9	7.0	chr3	87838839	87839601	(110455958)	C	L1M2	LINE/L1	(808)	5335	4597	2630029
15	14.5	5.0	2.4	chr3	88059213	88059252	(110236307)	+	GA-rich	Low_complexity	1	42	(0)	2630312
13	0.0	0.0	0.0	chr3	88059269	88059285	(110236274)	+	(CGG)n	Simple_repeat	1	17	(0)	2630313
20	23.6	0.0	0.0	chr3	88059419	88059468	(110236091)	+	(GGC)n	Simple_repeat	1	50	(0)	2630314
10450	13.5	1.1	0.6	chr3	88794792	88796414	(109499145)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	2631249
26	20.3	0.0	0.0	chr3	93979723	93979773	(104315786)	+	A-rich	Low_complexity	1	51	(0)	2633632
41	0.0	0.0	0.0	chr3	93980727	93980761	(104314798)	+	(GT)n	Simple_repeat	1	35	(0)	2633633
2110	11.7	0.3	0.3	chr3	95168706	95168988	(103126571)	+	AluSp	SINE/Alu	1	283	(30)	2635171
243	28.9	0.0	5.8	chr3	95169173	95169275	(103126284)	C	L1ME3A	LINE/L1	(0)	6173	6077	2635172
4552	16.1	2.4	1.1	chr3	96760334	96761221	(101534338)	+	MER4D1	LTR/ERV1	1	842	(58)	2636997
317	34.5	4.1	3.5	chr3	96761411	96761554	(101534005)	C	LTR78	LTR/ERV1	(657)	647	503	2636998
706	30.1	7.0	6.4	chr3	96828525	96828996	(101466563)	+	MamRep1527	LTR	49	523	(446)	2637054
38	0.0	0.0	0.0	chr3	97972612	97972646	(100322913)	+	(T)n	Simple_repeat	1	35	(0)	2638444
1014	13.1	2.7	0.7	chr3	97972655	97972799	(100322760)	C	AluJb	SINE/Alu	(29)	283	136	2638445
13	8.9	0.0	3.9	chr3	98593139	98593164	(99702395)	+	(CTC)n	Simple_repeat	1	26	(0)	2639139
25	23.8	4.4	1.1	chr3	98901145	98901234	(99394325)	+	(AGGAGC)n	Simple_repeat	1	94	(0)	2639604
14	28.2	0.0	1.9	chr3	98901217	98901273	(99394286)	+	G-rich	Low_complexity	1	55	(0)	2639605
13	16.9	3.0	0.0	chr3	98901541	98901573	(99393986)	+	GA-rich	Low_complexity	1	34	(0)	2639606
17	18.6	0.0	7.0	chr3	98902062	98902118	(99393441)	+	(CCTCGCT)n	Simple_repeat	1	57	(0)	2639607
3521	10.5	3.6	1.1	chr3	100273446	100273923	(98021636)	+	L1PREC2	LINE/L1	4572	5065	(1081)	2641449
1426	16.9	1.0	6.6	chr3	101514802	101514950	(96780609)	+	AluJo	SINE/Alu	1	136	(176)	2643094
1525	13.8	2.1	0.4	chr3	101514951	101515182	(96780377)	+	AluJo	SINE/Alu	64	299	(13)	2643095
1426	16.9	1.0	6.6	chr3	101515183	101515352	(96780207)	+	AluJo	SINE/Alu	137	302	(10)	2643094
18481	15.9	4.0	1.4	chr3	103112122	103119609	(95175950)	+	L1MA2	LINE/L1	16	7720	(3)	2645421
14	15.5	2.6	2.6	chr3	104106985	104107022	(94188537)	+	(ATTATAT)n	Simple_repeat	1	39	(0)	2646645
10105	10.4	6.0	0.5	chr3	104167112	104168602	(94126957)	C	THE1B-int	LTR/ERVL-MaLR	(1)	1579	1	2646727
11	18.1	2.4	4.8	chr3	105366741	105366781	(92928778)	+	G-rich	Low_complexity	1	42	(0)	2648180
20	28.7	2.8	0.0	chr3	105366924	105366995	(92928564)	+	(CCG)n	Simple_repeat	1	74	(0)	2648181
48	0.0	0.0	0.0	chr3	105368224	105368264	(92927295)	+	(AG)n	Simple_repeat	1	41	(0)	2648182
31	0.0	0.0	0.0	chr3	107523219	107523247	(90772312)	+	(GCG)n	Simple_repeat	1	29	(0)	2651001
19	29.8	1.2	2.4	chr3	111071764	111071844	(87223715)	+	(GGC)n	Simple_repeat	1	82	(0)	2656044
21	22.7	0.0	0.0	chr3	111071965	111072015	(87223544)	+	G-rich	Low_complexity	1	51	(0)	2656045
16	14.7	0.0	0.0	chr3	111072131	111072160	(87223399)	+	(GCT)n	Simple_repeat	1	30	(0)	2656046
14	12.9	2.8	2.7	chr3	111072372	111072407	(87223152)	+	(GCCCGCG)n	Simple_repeat	1	37	(0)	2656047
2154	11.1	3.9	0.0	chr3	111487528	111487824	(86807735)	+	AluSz	SINE/Alu	1	309	(3)	2656565
15184	11.6	1.3	0.9	chr3	111487825	111492745	(86802814)	+	L1PA3	LINE/L1	381	6855	(3)	2656564
9512	14.9	2.6	0.6	chr3	112865396	112868202	(85427357)	C	L1MA3	LINE/L1	(2)	7365	4498	2658416
17	4.9	0.0	0.0	chr3	113747007	113747027	(84548532)	+	(C)n	Simple_repeat	1	21	(0)	2659671
2365	23.4	7.9	0.7	chr3	118773547	118774132	(79521427)	+	MER45B	DNA/hAT-Tip100	15	646	(394)	2666673
3221	16.9	0.5	0.5	chr3	118774133	118774687	(79520872)	+	L1PA17	LINE/L1	1	555	(6318)	2666674
293	29.7	4.1	4.1	chr3	119241130	119241252	(79054307)	C	MIRb	SINE/MIR	(47)	221	99	2667269
16	6.5	5.9	2.8	chr3	120093888	120093921	(78201638)	+	G-rich	Low_complexity	1	36	(0)	2668615
12	8.8	4.2	0.0	chr3	120094347	120094370	(78201189)	+	(TCCT)n	Simple_repeat	1	25	(0)	2668616
19	0.0	0.0	0.0	chr3	120094385	120094408	(78201151)	+	(GGC)n	Simple_repeat	1	24	(0)	2668617
19	18.3	0.0	5.5	chr3	120094480	120094485	(78201074)	+	(TCCCCC)n	Simple_repeat	1	54	(0)	2668618
22	11.7	4.2	2.0	chr3	120094486	120094533	(78201026)	+	(CTC)n	Simple_repeat	1	50	(0)	2668619
13	5.2	0.0	0.0	chr3	120349090	120349109	(77946450)	+	(GCA)n	Simple_repeat	1	20	(0)	2669018
13	5.3	0.0	0.0	chr3	120908373	120908392	(77387167)	+	(CGC)n	Simple_repeat	1	20	(0)	2669849
24	9.5	0.0	0.0	chr3	120908416	120908449	(77387110)	+	(TG)n	Simple_repeat	1	34	(0)	2669850
25	10.6	0.0	0.0	chr3	120908449	120908489	(77387070)	+	(GAGAGA)n	Simple_repeat	1	41	(0)	2669851
1754	26.3	6.7	5.2	chr3	121299617	121299704	(76995855)	+	L1MEg	LINE/L1	2541	2628	(4922)	2670242
1880	14.9	4.2	0.7	chr3	121299705	121300005	(76995554)	+	AluJb	SINE/Alu	1	312	(0)	2670248
1754	26.3	6.7	5.2	chr3	121300006	121300927	(76994632)	+	L1MEg	LINE/L1	2629	3566	(3984)	2670242
215	36.6	1.4	3.6	chr3	122306286	122306423	(75989136)	+	MIRc	SINE/MIR	1	139	(129)	2671788
1450	18.7	6.2	8.9	chr3	122306439	122306490	(75989069)	C	MER58B	DNA/hAT-Charlie	(0)	341	300	2671789
904	21.4	0.7	0.0	chr3	122306491	122306644	(75988915)	+	FRAM	SINE/Alu	1	155	(21)	2671790
1450	18.7	6.2	8.9	chr3	122306645	122306938	(75988621)	C	MER58B	DNA/hAT-Charlie	(42)	299	5	2671789
2162	29.0	5.2	4.4	chr3	123044685	123045618	(75249941)	+	Tigger10	DNA/TcMar-Tigger	894	1835	(9)	2673041
332	31.0	7.0	7.8	chr3	123045718	123045882	(75249677)	+	MIRc	SINE/MIR	63	217	(51)	2673042
1051	20.2	5.1	1.5	chr3	123305429	123305690	(74989869)	+	LTR40c	LTR/ERVL	161	444	(21)	2673495
16	36.2	0.0	1.3	chr3	123584947	123585025	(74710534)	+	(GCC)n	Simple_repeat	1	79	(0)	2673960
13	20.3	2.4	2.3	chr3	125595688	125595729	(72699830)	+	G-rich	Low_complexity	1	43	(0)	2677363
2812	1.3	0.0	0.0	chr3	125595842	125596142	(72699417)	C	AluYa5	SINE/Alu	(10)	301	1	2677364
12	23.8	0.0	6.0	chr3	126654636	126654685	(71640874)	+	(CCGGC)n	Simple_repeat	1	50	(0)	2678890
18	14.0	0.0	4.7	chr3	127419378	127419420	(70876139)	+	(CACACT)n	Simple_repeat	1	43	(0)	2680001
2031	13.3	2.3	0.0	chr3	127727430	127727729	(70567830)	+	AluJb	SINE/Alu	1	307	(5)	2680562
1699	25.2	6.9	8.9	chr3	127727730	127728306	(70567253)	C	L1MC5a	LINE/L1	(1505)	1272	708	2680561
3583	12.7	1.6	0.7	chr3	129694398	129694946	(68600613)	+	MER41A	LTR/ERV1	1	554	(0)	2684235
2868	17.6	8.9	2.8	chr3	129694947	129694981	(68600578)	+	LTR37-int	LTR/ERV1	4002	4032	(28)	2684229
995	14.5	0.0	0.0	chr3	129694982	129695126	(68600433)	+	AluJr	SINE/Alu	168	312	(0)	2684236
468	19.1	1.1	0.0	chr3	131729197	131729290	(66566269)	C	MamTip3	DNA/hAT-Tip100	(3)	497	403	2687357
276	27.3	6.7	3.8	chr3	133196602	133196761	(65098798)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	348	2689545
244	25.4	5.6	0.0	chr3	133196853	133196919	(65098640)	C	MLT1J	LTR/ERVL-MaLR	(329)	281	211	2689545
24	24.1	4.4	2.1	chr3	133895487	133895577	(64399982)	+	GA-rich	Low_complexity	1	95	(0)	2690630
21	10.8	2.4	2.3	chr3	133895644	133895685	(64399874)	+	GA-rich	Low_complexity	1	43	(0)	2690631
14	17.2	1.6	9.4	chr3	133895749	133895811	(64399748)	+	G-rich	Low_complexity	1	64	(0)	2690632
13	14.0	0.0	5.7	chr3	133895850	133895884	(64399675)	+	(CGCCTG)n	Simple_repeat	1	35	(0)	2690633
12	11.6	3.3	3.2	chr3	134250381	134250410	(64045149)	+	(CCGGC)n	Simple_repeat	1	31	(0)	2691135
29	26.3	2.1	1.1	chr3	134250496	134250588	(64044971)	+	(CGG)n	Simple_repeat	1	95	(0)	2691136
12	9.6	2.4	9.5	chr3	134250703	134250743	(64044816)	+	(GCCCCGA)n	Simple_repeat	1	42	(0)	2691137
2106	8.3	0.0	7.7	chr3	134676954	134677266	(63618293)	+	AluSx3	SINE/Alu	1	289	(22)	2691774
333	32.5	11.8	5.3	chr3	135965700	135965939	(62329620)	C	L1MEc	LINE/L1	(6403)	464	210	2693576
17	17.2	4.2	2.0	chr3	135965941	135965988	(62329571)	+	(GGCCG)n	Simple_repeat	1	50	(0)	2693593
18	4.0	0.0	0.0	chr3	135966037	135966062	(62329497)	+	(CGGTG)n	Simple_repeat	1	26	(0)	2693594
2760	20.3	8.5	10.3	chr3	137799489	137800438	(60495121)	C	MER21C	LTR/ERVL	(5)	933	3	2696532
6108	16.3	1.5	1.5	chr3	137993121	137994746	(60300813)	C	L1M3	LINE/L1	(563)	5749	4118	2696788
13	11.6	2.2	8.7	chr3	142225686	142225730	(56069829)	+	(CAGCCGC)n	Simple_repeat	1	46	(0)	2703768
2437	5.8	0.3	0.0	chr3	142225760	142226051	(56069508)	C	AluSg	SINE/Alu	(16)	294	2	2703769
2024	14.0	0.7	3.2	chr3	142554640	142554953	(55740606)	+	AluJr	SINE/Alu	1	306	(6)	2704296
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
11	15.3	11.4	0.0	chr3	142723949	142723992	(55571567)	+	(CCGCAGGCC)n	Simple_repeat	1	49	(0)	2704607
19	15.0	0.0	0.0	chr3	142724476	142724512	(55571047)	+	G-rich	Low_complexity	1	37	(0)	2704608
17	3.2	2.5	9.8	chr3	142724600	142724639	(55570920)	+	(CCT)n	Simple_repeat	1	41	(0)	2704609
187	34.8	1.1	3.2	chr3	142863542	142863636	(55431923)	+	MamSINE1	SINE/tRNA-RTE	102	194	(96)	2704812
187	32.9	9.7	3.5	chr3	142863637	142863681	(55431878)	+	MamRTE1	LINE/RTE-BovB	130	279	(3533)	2704813
11	21.1	2.5	2.4	chr3	143644517	143644556	(54651003)	+	A-rich	Low_complexity	1	41	(0)	2705952
14	13.7	4.5	4.3	chr3	146251023	146251066	(52044493)	+	GA-rich	Low_complexity	1	46	(0)	2709348
357	32.0	14.5	4.4	chr3	146543689	146543917	(51751642)	C	MIR	SINE/MIR	(0)	262	7	2709707
12	6.9	5.9	5.6	chr3	146544852	146544885	(51750674)	+	(GGAACT)n	Simple_repeat	1	36	(0)	2709708
9922	9.8	1.1	2.0	chr3	147271599	147273124	(51022435)	+	L1MA1	LINE/L1	4743	6253	(1312)	2710601
6825	10.5	1.4	0.7	chr3	147273120	147274244	(51021315)	+	L1MA1	LINE/L1	6578	7716	(5)	2710601
15	20.2	4.8	4.6	chr3	148991651	148991712	(49303847)	+	(CCG)n	Simple_repeat	1	65	(0)	2712870
15	11.5	2.3	6.8	chr3	148992096	148992138	(49303421)	+	(CGGCCC)n	Simple_repeat	1	44	(0)	2712871
13	22.8	0.0	0.0	chr3	150078977	150079012	(48216547)	+	(GCCTCA)n	Simple_repeat	1	36	(0)	2714645
835	20.2	10.6	4.9	chr3	150079306	150079570	(48215989)	+	ORSL-2a	DNA/hAT-Tip100	1	282	(60)	2714646
2018	20.6	7.0	0.8	chr3	150253919	150254389	(48041170)	C	Charlie4a	DNA/hAT-Charlie	(3)	505	4	2714946
1971	14.5	0.0	2.4	chr3	152624794	152625089	(45670470)	C	AluJo	SINE/Alu	(23)	289	1	2718438
1035	13.4	3.9	0.0	chr3	152625101	152625272	(45670287)	C	L1MC1	LINE/L1	(0)	6333	6155	2718439
15	15.9	2.9	0.0	chr3	154121389	154121423	(44174136)	+	(CGGCGC)n	Simple_repeat	1	36	(0)	2720752
6050	13.9	4.0	1.7	chr3	155732901	155733929	(42561630)	+	L1MA8	LINE/L1	5742	6795	(767)	2722886
2340	12.7	1.3	0.0	chr3	155753406	155753712	(42541847)	+	AluSx3	SINE/Alu	1	311	(0)	2722925
2842	10.5	1.5	0.0	chr3	156043593	156043981	(42251578)	C	L1PA13	LINE/L1	(0)	6163	5769	2723482
22	7.7	2.2	4.3	chr3	156674852	156674896	(41620663)	+	(GCCCCG)n	Simple_repeat	1	46	(0)	2724395
832	13.6	6.1	0.8	chr3	157174326	157174450	(41121109)	C	FLAM_A	SINE/Alu	(10)	132	1	2725094
312	12.0	0.0	0.0	chr3	158458411	158458460	(39837099)	+	MADE1	DNA/TcMar-Mariner	31	80	(0)	2726829
453	34.3	4.6	2.4	chr3	160486063	160486274	(37809285)	+	HAL1ME	LINE/L1	652	868	(1597)	2729859
347	14.4	0.0	2.1	chr3	160486275	160486337	(37809222)	C	FLAM_C	SINE/Alu	(87)	46	1	2729860
1663	29.6	8.7	1.8	chr3	162355599	162356273	(35939286)	+	L1MA8	LINE/L1	7	732	(6298)	2732520
2430	10.0	0.0	0.0	chr3	163347465	163347775	(34947784)	+	AluSq2	SINE/Alu	3	313	(0)	2733634
5637	23.5	7.4	4.0	chr3	163347776	163349891	(34945668)	+	L1MC3	LINE/L1	5185	7354	(431)	2733633
69	16.8	0.7	3.4	chr3	165279817	165279964	(33015595)	+	(CCT)n	Simple_repeat	1	149	(0)	2736006
1501	13.1	7.7	9.8	chr3	167051520	167051866	(31243693)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	2738238
1378	21.7	8.1	3.4	chr3	167675657	167676162	(30619397)	+	L1MC4	LINE/L1	800	1331	(4884)	2739010
2044	16.0	1.6	0.0	chr3	167676168	167676473	(30619086)	+	AluJb	SINE/Alu	1	311	(1)	2739011
34	17.2	4.5	5.2	chr3	167676475	167676491	(30619068)	+	GA-rich	Low_complexity	1	115	(0)	2739012
27	11.1	5.4	8.2	chr3	167676492	167676584	(30618975)	+	A-rich	Low_complexity	1	98	(0)	2739013
1680	13.8	1.8	3.2	chr3	170870717	170870999	(27424560)	+	AluJb	SINE/Alu	15	293	(19)	2743740
18	16.0	0.0	0.0	chr3	170908597	170908631	(27386928)	+	(GCG)n	Simple_repeat	1	35	(0)	2743786
13	12.6	0.0	9.5	chr3	173585477	173585518	(24710041)	+	(TCCCCT)n	Simple_repeat	1	42	(0)	2747757
5697	12.6	2.4	1.5	chr3	175148139	175149217	(23146342)	C	L1PA16	LINE/L1	(698)	5468	4378	2749980
2894	17.2	4.0	0.9	chr3	176037992	176038567	(22256992)	C	L1MA9	LINE/L1	(840)	5303	4709	2751158
551	23.7	1.3	0.0	chr3	176038568	176038723	(22256836)	C	L1MA10	LINE/L1	(5)	6329	6172	2751163
606	22.6	0.0	1.2	chr3	176038743	176038912	(22256647)	C	L1ME1	LINE/L1	(180)	6172	6011	2751164
264	21.9	8.8	0.0	chr3	177300984	177301056	(20994503)	C	MIRb	SINE/MIR	(138)	130	51	2753013
20	26.9	3.5	2.3	chr3	177681666	177681750	(20613809)	+	(TTTC)n	Simple_repeat	1	88	(0)	2753627
406	32.7	6.4	0.0	chr3	177681945	177682149	(20613410)	+	MLT1J2	LTR/ERVL-MaLR	212	430	(18)	2753628
1130	19.0	0.0	0.0	chr3	179261583	179261782	(19033777)	+	Tigger5	DNA/TcMar-Tigger	29	228	(2178)	2755853
23	16.7	7.3	4.8	chr3	179653052	179653169	(18642390)	+	(GCCCGCT)n	Simple_repeat	1	120	(0)	2756626
881	25.6	3.4	2.4	chr3	182038865	182039221	(16256338)	+	MSTD	LTR/ERVL-MaLR	6	396	(0)	2760460
216	32.5	10.9	2.4	chr3	183885151	183885317	(14410242)	C	MIRb	SINE/MIR	(41)	227	45	2763584
1969	17.8	1.6	0.7	chr3	185010720	185011022	(13284537)	+	AluJb	SINE/Alu	1	306	(6)	2765662
4385	21.5	5.0	5.3	chr3	185011023	185011145	(13284414)	+	L1MEc	LINE/L1	1204	1319	(5081)	2765661
36	23.5	0.0	0.0	chr3	187745323	187745401	(10550158)	+	(AGC)n	Simple_repeat	1	79	(0)	2770635
565	21.9	0.7	2.1	chr3	188174278	188174417	(10121142)	C	UCON86	LINE/L2	(1)	681	544	2771422
466	38.7	7.7	5.2	chr3	189575516	189576002	(8719557)	+	L2b	LINE/L2	2886	3375	(0)	2773778
21	17.3	0.0	0.0	chr3	190120671	190120711	(8174848)	+	(GCA)n	Simple_repeat	1	41	(0)	2774610
5767	11.1	3.0	1.2	chr3	190277384	190278753	(8016806)	C	L1PA13	LINE/L1	(0)	6163	4781	2774872
452	39.2	6.8	0.0	chr3	190278754	190279041	(8016518)	C	L2a	LINE/L2	(339)	3080	2772	2774871
513	33.0	1.6	0.0	chr3	190514250	190514431	(7781128)	C	MIR3	SINE/MIR	(1)	207	23	2775223
1798	16.8	0.3	1.0	chr3	192865784	192866075	(5429484)	+	AluJb	SINE/Alu	21	310	(2)	2778584
754	18.9	4.2	0.0	chr3	192887813	192887971	(5407588)	C	MER5A1	DNA/hAT-Charlie	(0)	166	1	2778623
19	0.0	0.0	0.0	chr3	193241119	193241142	(5054417)	+	(GGCG)n	Simple_repeat	1	24	(0)	2779170
394	22.0	3.0	4.7	chr3	193241639	193241786	(5053773)	C	MIR3	SINE/MIR	(50)	158	19	2779171
8098	3.7	0.3	0.0	chr3	193606271	193608088	(4687471)	C	L1PA5	LINE/L1	(4)	6150	4326	2779756
9577	15.9	2.0	0.7	chr3	193714032	193715399	(4580160)	+	MSTA-int	LTR/ERVL-MaLR	1	1395	(256)	2779882
13	12.5	0.0	0.0	chr3	196739832	196739857	(1555702)	+	(GCCCC)n	Simple_repeat	1	26	(0)	2785665
17	9.7	0.0	5.4	chr3	196740031	196740067	(1555492)	+	(TCCCC)n	Simple_repeat	1	37	(0)	2785666
2184	6.7	5.3	0.0	chr3	196742096	196742378	(1553181)	C	AluSp	SINE/Alu	(8)	305	7	2785667
2349	6.4	0.3	2.4	chr4	54889	55186	(190159369)	C	AluY	SINE/Alu	(19)	292	1	2788570
282	30.9	2.8	3.5	chr4	473488	473631	(189740924)	+	MER57E3	LTR/ERV1	296	438	(49)	2789143
14	17.6	0.0	0.0	chr4	1580124	1580155	(188634400)	+	A-rich	Low_complexity	1	32	(0)	2790316
12	17.1	4.8	7.7	chr4	2067590	2067651	(188146904)	+	G-rich	Low_complexity	1	65	(0)	2791051
45	50.8	1.1	1.2	chr4	2068099	2068662	(188145893)	+	(TG)n	Simple_repeat	1	570	(0)	2791052
755	27.6	14.9	0.2	chr4	2424848	2425300	(187789255)	C	HAL1	LINE/L1	(1136)	1371	841	2791531
1176	21.7	14.3	4.5	chr4	2597761	2597911	(187616644)	C	L1ME1	LINE/L1	(205)	6934	6766	2791900
1136	18.1	14.6	3.0	chr4	2953954	2954218	(187260337)	+	AluJr	SINE/Alu	2	302	(10)	2792473
183	41.5	1.2	0.0	chr4	3401612	3401693	(186812862)	C	MIR	SINE/MIR	(174)	88	6	2793144
572	26.6	9.0	0.1	chr4	4912858	4913051	(185301504)	C	MIRb	SINE/MIR	(39)	229	8	2795699
23	15.8	0.0	2.3	chr4	5453202	5453245	(184761310)	+	GA-rich	Low_complexity	1	44	(0)	2796595
269	23.3	0.0	0.0	chr4	5453433	5453492	(184761063)	+	MIR3	SINE/MIR	88	147	(61)	2796596
2226	11.5	0.0	0.3	chr4	5453622	5453916	(184760639)	+	AluSq2	SINE/Alu	1	294	(19)	2796597
556	27.7	6.0	0.5	chr4	5824549	5824737	(184389818)	+	MER58C	DNA/hAT-Charlie	1	200	(15)	2797239
297	27.3	7.6	4.3	chr4	5824972	5825086	(184389469)	+	MIRb	SINE/MIR	108	226	(42)	2797240
449	27.7	13.4	4.5	chr4	6051020	6051209	(184163346)	C	MIRb	SINE/MIR	(6)	262	43	2797662
2358	7.3	0.3	5.5	chr4	6051210	6051539	(184163016)	C	AluSq2	SINE/Alu	(0)	313	1	2797663
7969	6.3	23.6	0.1	chr4	6672541	6673747	(183540808)	+	LTR12C	LTR/ERV1	2	1579	(0)	2798852
12	32.4	0.0	0.0	chr4	6673912	6673958	(183540597)	+	(GCGT)n	Simple_repeat	1	47	(0)	2798853
2122	25.0	1.5	4.6	chr4	6702627	6703233	(183511322)	C	L1MC4	LINE/L1	(937)	7105	6518	2798908
43	0.0	2.1	2.1	chr4	6703590	6703636	(183510919)	+	(AAAT)n	Simple_repeat	1	48	(0)	2798910
2140	11.3	3.5	0.0	chr4	7528415	7528714	(182685841)	C	AluSx1	SINE/Alu	(1)	311	1	2800271
1023	23.6	15.1	0.3	chr4	7528776	7529153	(182685402)	C	MLT1C	LTR/ERVL-MaLR	(17)	450	7	2800272
1485	30.5	4.1	3.5	chr4	9969917	9970555	(180244000)	+	L1PBa	LINE/L1	39	682	(6181)	2803990
1878	25.4	4.5	4.5	chr4	9970584	9970703	(180243852)	+	MER101-int	LTR/ERV1	4245	4357	(514)	2803989
3500	8.1	2.9	3.9	chr4	9970704	9971191	(180243364)	+	LTR2B	LTR/ERV1	1	483	(0)	2803992
17266	14.9	2.5	1.1	chr4	13284807	13287751	(176926804)	C	L1PA15	LINE/L1	(2)	8158	5169	2809103
13	16.8	2.8	2.8	chr4	15681302	15681347	(174533208)	+	G-rich	Low_complexity	1	46	(0)	2813056
307	26.3	2.9	3.2	chr4	15714489	15714658	(174499897)	C	L1ME4c	LINE/L1	(265)	565	436	2813118
1096	24.9	11.3	0.3	chr4	15714668	15715029	(174499526)	+	MLT1I	LTR/ERVL-MaLR	3	409	(2)	2813119
778	11.6	4.4	0.0	chr4	17510941	17511069	(172703486)	+	L1PB4	LINE/L1	6015	6149	(7)	2816347
13	0.0	5.0	0.0	chr4	17511136	17511155	(172703400)	+	(GCT)n	Simple_repeat	1	21	(0)	2816348
1128	20.7	10.3	0.4	chr4	17613791	17614061	(172600494)	+	AluJb	SINE/Alu	2	302	(10)	2816581
24	27.1	4.3	2.1	chr4	18736541	18736633	(171477922)	+	(AT)n	Simple_repeat	1	97	(0)	2818389
16	19.6	0.0	0.0	chr4	18736616	18736645	(171477910)	+	(CA)n	Simple_repeat	1	30	(0)	2818390
22	29.7	1.9	3.7	chr4	18736634	18736647	(171477908)	+	(ATACAT)n	Simple_repeat	1	109	(0)	2818391
17	29.0	0.0	0.0	chr4	18736647	18736692	(171477863)	+	GA-rich	Low_complexity	1	46	(0)	2818392
1387	20.4	4.9	4.8	chr4	18736693	18737085	(171477470)	C	MLT2B4	LTR/ERVL	(48)	366	1	2818393
10232	14.5	1.7	0.2	chr4	19783085	19784690	(170429865)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	3	2820039
33	0.0	2.9	0.0	chr4	25160484	25160518	(165054037)	+	(AAAAC)n	Simple_repeat	1	36	(0)	2828388
15	14.2	10.6	0.0	chr4	26860767	26860813	(163353742)	+	(GCG)n	Simple_repeat	1	52	(0)	2831734
16	0.0	0.0	0.0	chr4	26860925	26860942	(163353613)	+	(T)n	Simple_repeat	1	18	(0)	2831735
26	23.2	0.0	4.8	chr4	26861040	26861122	(163353433)	+	(GGC)n	Simple_repeat	1	83	(0)	2831736
13	17.3	3.9	5.7	chr4	26861187	26861237	(163353318)	+	(GCTGC)n	Simple_repeat	1	53	(0)	2831737
20	0.0	0.0	0.0	chr4	26861696	26861717	(163352838)	+	(T)n	Simple_repeat	1	22	(0)	2831738
13488	18.8	2.9	1.4	chr4	31288978	31290824	(158923731)	C	L1MA6	LINE/L1	(51)	6249	4385	2837903
22	28.6	1.9	3.8	chr4	38664913	38665016	(151549539)	+	(CCTCCC)n	Simple_repeat	1	106	(0)	2848199
16	25.1	2.8	4.1	chr4	38664975	38665045	(151549510)	+	(CCCG)n	Simple_repeat	1	73	(0)	2848200
10592	12.0	3.2	0.4	chr4	41968086	41969668	(148244887)	+	THE1C-int	LTR/ERVL-MaLR	3	1631	(0)	2854885
15	9.7	0.0	0.0	chr4	42656757	42656778	(147557777)	+	(AC)n	Simple_repeat	1	22	(0)	2855919
12	19.1	5.9	3.7	chr4	42656945	42656995	(147557560)	+	(CCGCG)n	Simple_repeat	1	54	(0)	2855920
13	16.3	0.0	5.3	chr4	47032599	47032636	(143181919)	+	(CACCCG)n	Simple_repeat	1	38	(0)	2861648
14	12.2	0.0	0.0	chr4	48779878	48779904	(141434651)	+	(GCGCC)n	Simple_repeat	1	27	(0)	2864375
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
14	13.7	0.0	5.6	chr4	49289254	49289289	(140925266)	+	(TTTTGC)n	Simple_repeat	1	36	(0)	2865068
1804	12.9	6.2	0.0	chr4	49289292	49289578	(140924977)	C	L1PA10	LINE/L1	(0)	6168	5863	2865069
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
2364	19.6	5.0	4.4	chr4	49493900	49494948	(140719607)	+	L1MB8	LINE/L1	4777	5836	(342)	2865154
2241	13.0	7.3	0.5	chr4	49494958	49495361	(140719194)	+	MER61C	LTR/ERV1	11	428	(0)	2865155
15	22.3	0.0	6.8	chr4	51844404	51844462	(138370093)	+	(GCGCGG)n	Simple_repeat	1	59	(0)	2865386
313	24.2	5.9	3.1	chr4	52722896	52722993	(137491562)	C	MIR	SINE/MIR	(70)	192	92	2866637
314	21.2	13.1	2.6	chr4	54092414	54092529	(136122026)	+	MIRc	SINE/MIR	21	150	(118)	2868718
351	28.4	1.7	4.1	chr4	54092531	54092651	(136121904)	C	L2b	LINE/L2	(2)	3373	3256	2868719
14	16.2	4.7	2.2	chr4	55546253	55546295	(134668260)	+	(CCGCC)n	Simple_repeat	1	45	(0)	2871090
12	10.9	0.0	8.6	chr4	56821734	56821768	(133392787)	+	G-rich	Low_complexity	1	35	(0)	2873371
308	33.3	0.9	0.0	chr4	56822067	56822171	(133392384)	C	L2b	LINE/L2	(6)	3369	3264	2873372
13	23.8	5.4	3.9	chr4	56907974	56908047	(133306508)	+	(CCGAGGC)n	Simple_repeat	1	78	(0)	2873604
2457	21.6	4.8	5.8	chr4	60797317	60797558	(129416997)	+	MER76	LTR/ERVL	1	235	(456)	2878574
18365	12.9	2.4	2.2	chr4	62305096	62309073	(127905482)	+	L1MA3	LINE/L1	3735	7724	(0)	2880622
13	18.2	0.0	4.9	chr4	65670313	65670353	(124544202)	+	(GCTGAGG)n	Simple_repeat	1	41	(0)	2884662
12	25.4	4.7	3.0	chr4	67545660	67545723	(122668832)	+	(CCTCCAG)n	Simple_repeat	1	67	(0)	2887099
2119	13.6	0.7	0.7	chr4	67686674	67686981	(122527574)	+	AluJr4	SINE/Alu	5	312	(0)	2887321
2479	8.4	0.0	0.0	chr4	67687035	67687333	(122527222)	C	AluSg	SINE/Alu	(11)	299	1	2887322
269	34.3	22.7	1.7	chr4	68017294	68017584	(122196971)	C	L2c	LINE/L2	(16)	3371	3002	2887790
1047	20.6	0.0	1.6	chr4	69841434	69841617	(120372938)	+	AluJo	SINE/Alu	1	181	(131)	2889839
1519	17.5	0.0	1.7	chr4	69841618	69841857	(120372698)	+	AluJb	SINE/Alu	64	299	(13)	2889840
3923	16.4	5.2	4.2	chr4	70123672	70124646	(120089909)	+	L1MA8	LINE/L1	5962	7052	(658)	2890203
19	0.0	0.0	0.0	chr4	71229813	71229833	(118984722)	+	(T)n	Simple_repeat	1	21	(0)	2891964
5432	25.2	6.8	6.2	chr4	71681900	71683262	(118531293)	C	L1MEc	LINE/L1	(1569)	4750	3440	2892529
1927	17.7	1.9	0.0	chr4	71683263	71683567	(118530988)	C	AluJb	SINE/Alu	(1)	311	1	2892530
5432	24.7	6.7	6.4	chr4	71683568	71684759	(118529796)	C	L1MEc	LINE/L1	(2880)	3439	2180	2892529
596	25.1	4.7	1.7	chr4	72031637	72031829	(118182726)	C	MIR	SINE/MIR	(1)	261	63	2892989
2606	25.1	2.0	2.0	chr4	72677760	72678604	(117535951)	C	L1PB3	LINE/L1	(5219)	1697	713	2893808
952	30.3	6.8	5.1	chr4	72678850	72679339	(117535216)	+	ERV3-16A3_I-int	LTR/ERVL	2016	2514	(2712)	2893806
328	32.8	3.6	0.7	chr4	73068708	73068842	(117145713)	C	MIRc	SINE/MIR	(45)	223	85	2894350
635	31.9	5.7	2.5	chr4	73863625	73863862	(116350693)	C	MLT1K	LTR/ERVL-MaLR	(167)	428	183	2895441
273	31.4	10.3	2.8	chr4	73864369	73864476	(116350079)	C	LTR16E1	LTR/ERVL	(164)	374	258	2895442
55	11.2	0.0	0.0	chr4	73982165	73982244	(116232311)	+	(A)n	Simple_repeat	1	80	(0)	2895572
13	25.8	0.0	0.0	chr4	74038534	74038570	(116175985)	+	(CAG)n	Simple_repeat	1	37	(0)	2895644
13	19.6	2.2	4.3	chr4	74158303	74158347	(116056208)	+	(GGTGGC)n	Simple_repeat	1	46	(0)	2895789
303	29.1	1.1	1.1	chr4	76214626	76214712	(113999843)	+	L2b	LINE/L2	3286	3372	(3)	2898911
467	15.1	3.1	0.0	chr4	76725457	76725549	(113489006)	C	L1MA5A	LINE/L1	(2)	6295	6200	2899745
16	16.6	0.0	0.0	chr4	78939644	78939670	(111274885)	+	(T)n	Simple_repeat	1	27	(0)	2902973
12	13.9	0.0	0.0	chr4	80072759	80072782	(110141773)	+	(CCG)n	Simple_repeat	1	24	(0)	2904351
1021	36.9	12.2	2.7	chr4	80517026	80518535	(109696020)	C	L2	LINE/L2	(1338)	2081	409	2904923
271	31.0	7.8	2.0	chr4	80518809	80518982	(109695573)	C	L2b	LINE/L2	(236)	3151	2975	2904924
2165	8.6	0.4	0.0	chr4	83026145	83026451	(107188104)	C	AluYc	SINE/Alu	(0)	299	1	2908698
1393	24.9	5.8	9.1	chr4	83026452	83026498	(107188057)	C	L1MCa	LINE/L1	(5515)	993	949	2908693
1815	15.3	0.3	5.0	chr4	83026499	83026818	(107187737)	C	AluJo	SINE/Alu	(7)	305	1	2908699
13	9.4	5.3	5.0	chr4	83485208	83485245	(106729310)	+	G-rich	Low_complexity	1	40	(0)	2909614
14	16.4	2.9	0.0	chr4	84965922	84965955	(105248600)	+	(CCGACC)n	Simple_repeat	1	35	(0)	2911909
18	26.4	0.0	7.9	chr4	84966648	84966680	(105247875)	+	(TCC)n	Simple_repeat	1	43	(46)	2911910
13	9.3	0.0	0.0	chr4	84966681	84966703	(105247852)	+	(CTGA)n	Simple_repeat	1	23	(0)	2911911
734	30.7	7.0	5.5	chr4	86197763	86198074	(104016481)	+	L1ME3E	LINE/L1	4664	4957	(1189)	2913487
2029	21.9	7.7	1.8	chr4	86198075	86198562	(104015993)	+	LTR40a	LTR/ERVL	1	519	(0)	2913489
734	30.7	7.0	5.5	chr4	86198563	86198935	(104015620)	+	L1ME3E	LINE/L1	4958	5360	(786)	2913487
14	0.0	0.0	0.0	chr4	86594582	86594599	(103619956)	+	(GAG)n	Simple_repeat	1	18	(0)	2914076
1717	16.5	0.4	2.6	chr4	86796353	86796625	(103417930)	+	AluJr4	SINE/Alu	1	267	(45)	2914368
653	31.1	8.6	4.7	chr4	86878406	86878749	(103335806)	+	L1M3d	LINE/L1	1	359	(5532)	2914512
3932	22.1	4.5	5.1	chr4	86878915	86879838	(103334717)	+	L1M4c	LINE/L1	627	2384	(873)	2914513
13	17.6	2.5	2.4	chr4	87006836	87006876	(103207679)	+	(CTGCCGC)n	Simple_repeat	1	41	(0)	2914790
23	31.3	5.2	0.7	chr4	88379171	88379305	(101835250)	+	G-rich	Low_complexity	1	142	(0)	2917064
13	18.9	2.0	6.0	chr4	89837455	89837503	(100377052)	+	(CCTCTT)n	Simple_repeat	1	50	(0)	2919195
12	23.2	0.0	4.5	chr4	90128267	90128310	(100086245)	+	G-rich	Low_complexity	1	44	(0)	2919579
30	3.5	0.0	0.0	chr4	90128488	90128517	(100086038)	+	(TG)n	Simple_repeat	1	30	(0)	2919580
23	6.5	3.0	0.0	chr4	90128821	90128853	(100085702)	+	(CT)n	Simple_repeat	1	34	(0)	2919581
20512	13.0	3.4	1.0	chr4	91565086	91569425	(98645130)	C	L1PA14	LINE/L1	(1178)	6963	2545	2921298
908	21.6	7.7	2.6	chr4	91736562	91736927	(98477628)	+	MSTC	LTR/ERVL-MaLR	1	427	(1)	2921478
20	3.7	0.0	0.0	chr4	92305517	92305544	(97909011)	+	(CGCCT)n	Simple_repeat	1	28	(0)	2922096
14	11.0	0.0	5.9	chr4	92306021	92306054	(97908501)	+	(ACACAT)n	Simple_repeat	1	34	(0)	2922097
261	31.2	5.0	1.0	chr4	93775203	93775299	(96439256)	C	MIR3	SINE/MIR	(16)	192	92	2924076
198	27.4	20.0	0.0	chr4	93775469	93775552	(96439003)	C	MIR3	SINE/MIR	(43)	165	61	2924077
12	16.9	0.0	0.0	chr4	95390476	95390502	(94824053)	+	A-rich	Low_complexity	1	27	(0)	2926367
184	26.6	12.2	7.8	chr4	95390542	95390643	(94823912)	+	MIR3	SINE/MIR	96	202	(6)	2926368
992	16.7	0.0	1.9	chr4	95390737	95390892	(94823663)	C	AluJr	SINE/Alu	(22)	290	138	2926369
2524	11.7	0.6	0.3	chr4	95390893	95391253	(94823302)	+	THE1B	LTR/ERVL-MaLR	1	362	(2)	2926370
29	0.0	0.0	0.0	chr4	98261351	98261378	(91953177)	+	(CCCGC)n	Simple_repeat	1	28	(0)	2929922
13	19.4	8.1	3.0	chr4	98261732	98261793	(91952762)	+	G-rich	Low_complexity	1	67	(0)	2929923
12	25.6	0.0	0.0	chr4	98658520	98658556	(91555999)	+	(CGTC)n	Simple_repeat	1	37	(0)	2930459
26	22.0	4.8	5.4	chr4	98658600	98658723	(91555832)	+	(CGCT)n	Simple_repeat	1	130	(0)	2930460
29	19.8	1.9	4.4	chr4	98995507	98995586	(91218969)	+	G-rich	Low_complexity	1	78	(0)	2931108
4814	18.3	5.8	2.2	chr4	99626993	99628199	(90586356)	C	L1MB8	LINE/L1	(806)	5340	4089	2931913
1855	15.2	1.5	1.2	chr4	99628333	99628658	(90585897)	C	MER2B	DNA/TcMar-Tigger	(0)	336	10	2931915
17	27.4	1.4	2.9	chr4	99946256	99946324	(90268231)	+	G-rich	Low_complexity	1	70	(0)	2932375
25	26.9	1.7	5.0	chr4	99946616	99946732	(90267823)	+	(GGCGGC)n	Simple_repeat	1	119	(0)	2932376
29	0.0	0.0	0.0	chr4	101346878	101346904	(88867651)	+	(CGC)n	Simple_repeat	1	27	(0)	2934248
21	15.3	3.1	6.0	chr4	101346965	101347029	(88867526)	+	(CCG)n	Simple_repeat	1	67	(0)	2934249
15	26.6	0.0	0.0	chr4	102345350	102345394	(87869161)	+	(CTGT)n	Simple_repeat	1	45	(0)	2935547
194	20.4	5.3	0.0	chr4	102868710	102868763	(87345792)	C	MIRc	SINE/MIR	(14)	254	198	2936282
14	20.3	0.0	7.5	chr4	102868954	102869006	(87345549)	+	(GGCC)n	Simple_repeat	1	53	(0)	2936283
946	20.9	0.0	0.0	chr4	103091599	103091756	(87122799)	+	AluJo	SINE/Alu	137	294	(18)	2936617
14	24.1	0.0	0.0	chr4	105474285	105474323	(84740232)	+	(CATT)n	Simple_repeat	1	39	(0)	2939523
3161	23.4	10.2	3.4	chr4	107045631	107046942	(83167613)	+	L1M8	LINE/L1	232	1726	(629)	2941572
23132	9.2	1.6	1.4	chr4	107579019	107585350	(82629205)	+	L1PA10	LINE/L1	4	6343	(10)	2942249
12	22.0	4.8	0.0	chr4	108167889	108167930	(82046625)	+	(GCGG)n	Simple_repeat	1	44	(0)	2943036
14	18.2	0.0	4.9	chr4	108650471	108650511	(81564044)	+	(TTTA)n	Simple_repeat	1	41	(0)	2943807
13	19.3	0.0	10.2	chr4	109433779	109433789	(80780766)	+	(TCCC)n	Simple_repeat	1	58	(0)	2944950
13	20.3	4.3	2.0	chr4	109433790	109433836	(80780719)	+	(CCTCCCG)n	Simple_repeat	1	49	(0)	2944951
17998	10.8	2.8	0.3	chr4	109582574	109587597	(80626958)	C	L1PA6	LINE/L1	(999)	5320	174	2945220
1802	17.8	0.0	4.8	chr4	110244099	110244412	(79970143)	C	AluJb	SINE/Alu	(13)	299	1	2946260
4235	12.6	0.4	1.4	chr4	112489481	112489762	(77724793)	+	L1PA16	LINE/L1	4680	4961	(1185)	2949249
1935	14.0	9.6	1.5	chr4	112489763	112490096	(77724459)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2949250
9920	12.4	8.9	0.3	chr4	112830633	112832072	(77382483)	+	LTR12C	LTR/ERV1	3	1579	(0)	2949968
351	20.6	12.1	12.8	chr4	113761739	113761855	(76452700)	+	L1MDb	LINE/L1	597	712	(5697)	2951248
456	30.2	9.0	0.6	chr4	116466117	116466299	(73748256)	+	MLT1N2	LTR/ERVL-MaLR	363	562	(0)	2954484
11436	10.3	0.4	0.1	chr4	117757125	117758700	(72455855)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2956037
17	21.4	10.2	1.0	chr4	118033558	118033645	(72180910)	+	G-rich	Low_complexity	1	97	(0)	2956363
393	25.8	3.1	0.0	chr4	118397459	118397551	(71817004)	C	LTR88c	LTR/Gypsy?	(763)	99	4	2956857
318	35.2	12.4	6.0	chr4	118913042	118913410	(71301145)	C	L2c	LINE/L2	(0)	3387	2992	2957705
40	0.0	0.0	0.0	chr4	118913564	118913597	(71300958)	+	(TG)n	Simple_repeat	1	34	(0)	2957706
290	26.1	6.1	0.0	chr4	119300200	119300312	(70914243)	+	MIR	SINE/MIR	60	184	(24)	2958229
21	23.0	2.4	4.7	chr4	119627302	119627391	(70587164)	+	(CCGCG)n	Simple_repeat	1	87	(0)	2958740
281	31.4	4.1	8.1	chr4	121058367	121058599	(69155956)	+	MIRb	SINE/MIR	4	227	(41)	2960570
75	8.5	1.7	1.7	chr4	121380133	121380248	(68834307)	+	(GA)n	Simple_repeat	1	118	(0)	2961003
7821	17.7	7.9	1.8	chr4	121479362	121480820	(68733735)	C	L1M1	LINE/L1	(5968)	1597	42	2961124
13	19.6	0.0	0.0	chr4	122152490	122152519	(68062036)	+	(GCC)n	Simple_repeat	1	30	(0)	2962145
18	13.6	3.7	5.4	chr4	124712247	124712300	(65502255)	+	(CTCCCG)n	Simple_repeat	1	56	(0)	2965643
23	24.2	1.6	0.0	chr4	124712431	124712493	(65502062)	+	(CCG)n	Simple_repeat	1	64	(0)	2965644
29	0.0	0.0	0.0	chr4	124712784	124712810	(65501745)	+	(CCCCGC)n	Simple_repeat	1	27	(0)	2965645
10854	13.0	1.4	0.3	chr4	124960680	124962281	(65252274)	C	THE1D-int	LTR/ERVL-MaLR	(11)	1620	1	2965976
14	4.9	0.0	0.0	chr4	125315653	125315673	(64898882)	+	(GGC)n	Simple_repeat	1	21	(0)	2966466
272	32.4	6.4	0.0	chr4	126989604	126989705	(63224850)	+	L2a	LINE/L2	3318	3426	(0)	2968527
1242	21.1	16.0	0.5	chr4	127029583	127029938	(63184617)	+	MLT1D	LTR/ERVL-MaLR	10	421	(46)	2968573
299	28.6	4.5	4.5	chr4	127622561	127622692	(62591863)	+	L2a	LINE/L2	3295	3426	(0)	2969317
2028	23.6	6.3	8.3	chr4	127879355	127879908	(62334647)	+	L1MC4	LINE/L1	7550	8042	(0)	2969680
2470	8.7	0.0	0.3	chr4	127879913	127880222	(62334333)	+	AluSx	SINE/Alu	1	309	(3)	2969685
29	21.5	6.1	5.1	chr4	128061433	128061580	(62152975)	+	(CGGCG)n	Simple_repeat	1	157	(0)	2970077
24	26.3	0.0	1.4	chr4	128062002	128062071	(62152484)	+	(GCC)n	Simple_repeat	1	70	(0)	2970078
16	0.0	0.0	0.0	chr4	128062593	128062610	(62151945)	+	(T)n	Simple_repeat	1	18	(0)	2970079
886	15.2	18.7	2.2	chr4	128387527	128387708	(61826847)	C	MER20	DNA/hAT-Charlie	(0)	219	1	2970676
2378	29.6	2.8	5.9	chr4	130195034	130195892	(60018663)	+	L1MD2	LINE/L1	452	1282	(5127)	2973104
1439	24.0	10.9	2.7	chr4	131061197	131061651	(59152904)	C	LTR27D	LTR/ERV1	(63)	781	207	2974160
239	23.8	12.5	0.0	chr4	131061631	131061693	(59152862)	C	MER51A	LTR/ERV1	(355)	279	208	2974161
239	30.1	0.0	1.2	chr4	131061686	131061769	(59152786)	C	LTR28C	LTR/ERV1	(904)	225	143	2974162
9919	9.8	5.8	0.1	chr4	136395167	136396652	(53817903)	+	LTR12C	LTR/ERV1	3	1579	(0)	2980404
1822	13.6	0.4	4.8	chr4	136646749	136647073	(53567482)	C	AluSz6	SINE/Alu	(0)	312	1	2980735
1631	19.0	2.4	3.2	chr4	136975082	136975419	(53239136)	C	MLT1A0	LTR/ERVL-MaLR	(30)	335	1	2981126
1722	17.6	0.3	5.3	chr4	136975510	136975827	(53238728)	+	AluJb	SINE/Alu	2	303	(9)	2981127
22400	10.7	1.3	0.8	chr4	137350581	137357055	(52857500)	+	L1PA8	LINE/L1	6	6479	(8)	2981578
883	28.9	1.2	3.1	chr4	137812341	137812597	(52401958)	+	MLT1G1-int	LTR/ERVL-MaLR	1238	1489	(0)	2982124
558	30.0	5.7	3.5	chr4	137812599	137812944	(52401611)	+	MLT1G1	LTR/ERVL-MaLR	2	347	(201)	2982124
15915	15.9	3.6	4.4	chr4	137939123	137941113	(52273442)	+	L1M1	LINE/L1	5278	7202	(517)	2982281
32	22.3	0.0	1.2	chr4	139084411	139084490	(51130065)	+	(CGGCGG)n	Simple_repeat	1	80	(0)	2983898
1967	17.1	0.0	0.0	chr4	139196026	139196318	(51018237)	C	AluJb	SINE/Alu	(19)	293	1	2984140
2203	11.0	0.0	0.0	chr4	139522742	139523053	(50691502)	C	AluSz	SINE/Alu	(0)	312	1	2984790
15	8.9	0.0	0.0	chr4	140152800	140152823	(50061732)	+	(CCA)n	Simple_repeat	1	24	(0)	2985801
15	22.4	0.0	5.8	chr4	140153131	140153182	(50061373)	+	(GCC)n	Simple_repeat	1	52	(0)	2985802
5256	15.9	5.5	3.8	chr4	140483187	140484470	(49730085)	+	L1M2	LINE/L1	4284	5593	(698)	2986299
13	25.7	3.5	1.7	chr4	140756306	140756362	(49458193)	+	(GCCCCCG)n	Simple_repeat	1	59	(0)	2986714
30	12.4	1.9	0.0	chr4	140756367	140756419	(49458136)	+	(GGA)n	Simple_repeat	1	54	(0)	2986715
36	7.2	0.0	0.0	chr4	141133452	141133495	(49081060)	+	(GT)n	Simple_repeat	1	44	(0)	2987301
9433	13.4	2.9	1.5	chr4	143646768	143648424	(46566131)	+	THE1C-int	LTR/ERVL-MaLR	2	1579	(1)	2990578
13	4.3	0.0	7.1	chr4	147732031	147732058	(42482497)	+	(GGGGC)n	Simple_repeat	1	28	(0)	2996130
2359	16.4	2.4	4.0	chr4	148334720	148335194	(41879361)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	1	2996990
625	32.4	4.9	0.8	chr4	148482050	148482304	(41732251)	+	L2	LINE/L2	2255	2520	(899)	2997187
10735	11.6	0.9	3.2	chr4	148897416	148899033	(41315522)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2997751
17369	11.5	1.2	2.4	chr4	149219999	149224613	(40989942)	+	L1PA14	LINE/L1	2206	6763	(18)	2998123
495	20.6	1.0	4.7	chr4	149224645	149224751	(40989804)	+	MLT1G1	LTR/ERVL-MaLR	232	334	(245)	2998122
1347	26.8	8.5	6.1	chr4	149224861	149225864	(40988691)	C	L1ME3D	LINE/L1	(44)	6198	5161	2998124
348	25.0	4.8	2.4	chr4	150023844	150023966	(40190589)	+	LTR90B	LTR	632	757	(39)	2999160
2140	20.9	3.9	7.3	chr4	150024157	150024802	(40189753)	+	MER21B	LTR/ERVL	5	614	(254)	2999161
21	23.5	1.5	2.9	chr4	150078208	150078275	(40136280)	+	(CTC)n	Simple_repeat	1	69	(0)	2999259
13	8.1	3.6	3.5	chr4	153222855	153222882	(36991673)	+	GA-rich	Low_complexity	1	29	(0)	3004257
198	30.5	5.0	1.0	chr4	153233003	153233098	(36981457)	C	L2	LINE/L2	(1067)	2352	2253	3004269
15	13.9	0.0	0.0	chr4	155954045	155954068	(34260487)	+	(T)n	Simple_repeat	1	24	(0)	3008144
1510	14.5	3.7	0.0	chr4	155954156	155954390	(34260165)	C	AluJb	SINE/Alu	(68)	244	1	3008145
38	5.0	0.0	0.0	chr4	157220633	157220674	(32993881)	+	(TG)n	Simple_repeat	1	42	(0)	3009823
23	14.7	4.4	0.0	chr4	157220686	157220730	(32993825)	+	GA-rich	Low_complexity	1	47	(0)	3009824
17	21.4	6.8	0.0	chr4	157220731	157220742	(32993813)	+	(GTGA)n	Simple_repeat	3	63	(0)	3009825
33	5.3	0.0	0.0	chr4	163494172	163494211	(26720344)	+	(GGGCA)n	Simple_repeat	1	40	(0)	3018140
14	26.4	1.4	6.8	chr4	167234628	167234700	(22979855)	+	(CTC)n	Simple_repeat	1	74	(0)	3023323
512	30.6	9.9	9.1	chr4	168609284	168609744	(21604811)	C	LTR16E2	LTR/ERVL	(73)	495	1	3025061
2481	21.2	1.0	1.5	chr4	168663138	168663659	(21550896)	C	MER74A	LTR/ERVL	(0)	558	40	3025138
16334	16.0	1.6	3.7	chr4	172728541	172730798	(17483757)	C	L1MA4	LINE/L1	(507)	7212	5010	3030656
12	7.5	6.7	3.1	chr4	173169705	173169734	(17044821)	+	(CCCG)n	Simple_repeat	1	32	(0)	3031240
13	21.7	0.0	2.6	chr4	173169735	173169742	(17044813)	+	(CCCCAGC)n	Simple_repeat	2	39	(0)	3031241
12	16.3	2.8	2.7	chr4	173169848	173169883	(17044672)	+	(TGCCGGC)n	Simple_repeat	1	37	(0)	3031242
18	24.4	0.0	0.0	chr4	173371225	173371272	(16843283)	+	(GCC)n	Simple_repeat	1	48	(0)	3031515
13	18.9	2.8	0.0	chr4	174283346	174283381	(15931174)	+	A-rich	Low_complexity	1	37	(0)	3032746
5847	17.5	16.1	2.9	chr4	175498479	175500000	(14714555)	C	MER52D	LTR/ERV1	(0)	2123	363	3034264
425	22.2	6.0	0.8	chr4	176196023	176196149	(14018406)	+	ORSL-2b	DNA/hAT-Tip100	157	290	(218)	3035206
22	23.4	1.0	7.1	chr4	176320228	176320324	(13894231)	+	(GGCCGG)n	Simple_repeat	1	98	(0)	3035383
3751	21.9	4.8	1.7	chr4	179501967	179502623	(10711932)	C	L1MB7	LINE/L1	(571)	5613	4922	3039609
1319	20.8	7.4	2.8	chr4	179502624	179502787	(10711768)	C	AluJo	SINE/Alu	(14)	298	135	3039611
35	0.0	0.0	0.0	chr4	179502788	179502820	(10711735)	+	(T)n	Simple_repeat	1	33	(0)	3039612
1319	20.8	7.4	2.8	chr4	179502821	179502939	(10711616)	C	AluJo	SINE/Alu	(178)	134	1	3039611
419	26.9	3.9	1.9	chr4	179867637	179867818	(10346737)	+	MER101	LTR/ERV1	234	519	(51)	3040028
819	22.7	15.4	3.3	chr4	181389231	181389531	(8825024)	+	MER2	DNA/TcMar-Tigger	1	344	(1)	3042018
412	12.7	7.1	7.1	chr4	181389748	181389874	(8824681)	+	UCON58	Unknown	14	140	(2)	3042019
78	0.0	0.0	0.0	chr4	183399075	183399143	(6815412)	+	(ACATA)n	Simple_repeat	1	69	(0)	3044871
19	13.7	2.5	0.0	chr4	184442882	184442921	(5771634)	+	G-rich	Low_complexity	1	41	(0)	3046571
2119	10.4	0.0	0.0	chr4	184442927	184443204	(5771351)	C	AluSq2	SINE/Alu	(14)	299	22	3046572
497	28.3	13.7	8.9	chr4	184537191	184537727	(5676828)	+	L1M6	LINE/L1	43	613	(5883)	3046748
1723	15.4	7.5	0.3	chr4	184537728	184538047	(5676508)	C	MER2	DNA/TcMar-Tigger	(0)	345	1	3046749
13	14.1	0.0	5.7	chr4	185535556	185535590	(4678965)	+	(CCGCC)n	Simple_repeat	1	35	(0)	3048440
200	26.3	0.0	3.4	chr4	186555802	186555860	(3658695)	+	MIRc	SINE/MIR	122	178	(90)	3049835
14	15.2	2.0	7.7	chr4	186723601	186723651	(3490904)	+	(CCGCCCG)n	Simple_repeat	1	52	(0)	3050036
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
7973	10.4	3.5	1.2	chr5	11943	13334	(181524925)	C	TAR1	Satellite/telo	(43)	2068	644	3054967
294	18.5	0.0	0.0	chr5	13334	13385	(181524874)	C	MLT2B3	LTR/ERVL	(341)	213	162	3054968
1032	17.1	5.1	1.1	chr5	13386	13574	(181524685)	C	THE1C	LTR/ERVL-MaLR	(0)	375	179	3054969
543	30.4	5.7	4.6	chr5	278740	278777	(181259482)	C	L2a	LINE/L2	(209)	3217	3183	3055248
13	12.7	2.6	5.1	chr5	321663	321700	(181216559)	+	G-rich	Low_complexity	1	39	(0)	3055309
13	7.7	0.0	9.1	chr5	322129	322161	(181216098)	+	G-rich	Low_complexity	1	33	(0)	3055310
17	36.3	0.0	0.0	chr5	1667559	1667624	(179870635)	+	GA-rich	Low_complexity	1	66	(0)	3056514
234	30.9	7.3	2.1	chr5	1944342	1944483	(179593776)	C	L1MEg	LINE/L1	(6061)	174	25	3056808
858	25.4	3.7	7.0	chr5	6558222	6558612	(174979647)	+	MLT1G3	LTR/ERVL-MaLR	180	549	(0)	3062019
1819	11.0	5.6	2.1	chr5	10248992	10249282	(171288977)	+	AluSz6	SINE/Alu	2	303	(9)	3066551
189	20.0	3.9	0.0	chr5	10249315	10249364	(171288895)	+	MIR	SINE/MIR	67	118	(144)	3066552
510	25.3	3.1	3.6	chr5	10249377	10249590	(171288669)	C	MIR	SINE/MIR	(32)	236	18	3066553
40	25.7	2.9	7.5	chr5	10307850	10308095	(171230164)	+	G-rich	Low_complexity	1	253	(0)	3066658
15204	16.4	3.5	2.4	chr5	15050397	15055332	(166482927)	C	L1MA5	LINE/L1	(6)	7713	2709	3073100
14236	21.5	4.2	7.2	chr5	22037692	22042610	(159495649)	+	L1MA6	LINE/L1	399	4874	(2688)	3082880
718	25.2	8.4	4.5	chr5	22531708	22531994	(159006265)	+	HAL1	LINE/L1	248	546	(1961)	3083551
2339	9.1	0.0	2.8	chr5	23213580	23213897	(158324362)	+	AluSc8	SINE/Alu	2	310	(1)	3084447
206	30.4	0.0	1.4	chr5	23213961	23214030	(158324229)	+	L2c	LINE/L2	3022	3090	(297)	3084448
2866	17.4	2.3	1.4	chr5	27367865	27368384	(154169875)	C	MER1A	DNA/hAT-Charlie	(4)	525	1	3089808
1044	31.8	8.4	5.5	chr5	27368385	27369246	(154169013)	+	L1ME3A	LINE/L1	2244	3145	(3001)	3089807
2201	17.4	1.7	1.4	chr5	27472074	27472487	(154065772)	+	MER61C	LTR/ERV1	14	428	(0)	3089960
747	22.1	2.8	7.1	chr5	27472488	27472711	(154065548)	+	MER61-int	LTR/ERV1	2	215	(5002)	3089960
26855	14.1	3.7	2.8	chr5	27472715	27477542	(154060717)	+	MER61-int	LTR/ERV1	343	5213	(4)	3089960
3796	23.9	11.0	8.0	chr5	31456509	31456703	(150081556)	+	L1M8	LINE/L1	2024	2233	(122)	3094953
1085	16.5	0.0	0.0	chr5	31456768	31456925	(150081334)	C	AluJr	SINE/Alu	(18)	294	137	3094957
307	27.9	0.0	0.0	chr5	31456936	31456996	(150081263)	C	AluSc	SINE/Alu	(248)	61	1	3094958
12	19.3	8.5	0.0	chr5	31639189	31639235	(149899024)	+	G-rich	Low_complexity	1	51	(0)	3095275
28	0.0	0.0	0.0	chr5	34087571	34087597	(147450662)	+	(T)n	Simple_repeat	1	27	(0)	3099343
1434	19.1	0.8	4.3	chr5	34087606	34087883	(147450376)	C	AluJb	SINE/Alu	(44)	268	1	3099344
2124	12.6	1.6	0.3	chr5	35528810	35529111	(146009148)	+	AluSx1	SINE/Alu	1	306	(6)	3101523
1487	28.7	8.8	5.6	chr5	35529112	35529247	(146009012)	+	L1ME3B	LINE/L1	6034	6186	(56)	3101522
1337	21.5	4.3	0.7	chr5	35617351	35617638	(145920621)	C	AluSx3	SINE/Alu	(11)	300	2	3101644
1321	29.6	1.8	6.0	chr5	35650833	35651295	(145886964)	C	MLT1J	LTR/ERVL-MaLR	(34)	478	36	3101699
526	28.6	3.5	5.6	chr5	35651367	35651544	(145886715)	+	Charlie17a	DNA/hAT-Charlie	44	217	(0)	3101700
18	27.2	4.9	1.2	chr5	36876605	36876685	(144661574)	+	(CGG)n	Simple_repeat	1	85	(0)	3103485
14	13.2	2.9	2.8	chr5	36876818	36876852	(144661407)	+	(CTCC)n	Simple_repeat	1	36	(0)	3103486
15	12.6	0.0	0.0	chr5	36876989	36877015	(144661244)	+	(GGA)n	Simple_repeat	1	27	(0)	3103487
19	4.0	0.0	0.0	chr5	36877200	36877225	(144661034)	+	(CGG)n	Simple_repeat	1	26	(0)	3103488
604	27.0	7.8	0.5	chr5	37248712	37248912	(144289347)	+	L1MC5a	LINE/L1	1874	2090	(687)	3104088
12	20.8	4.3	2.1	chr5	37249371	37249416	(144288843)	+	(GGCGCG)n	Simple_repeat	1	48	(0)	3104089
8100	8.7	1.9	1.4	chr5	37282818	37283587	(144254672)	C	THE1B-int	LTR/ERVL-MaLR	(297)	1283	497	3104154
14	28.5	2.9	2.8	chr5	38515592	38515660	(143022599)	+	G-rich	Low_complexity	1	71	(0)	3106232
412	21.4	0.0	1.0	chr5	38515666	38515764	(143022495)	+	HAL1	LINE/L1	2303	2400	(107)	3106228
310	24.4	3.4	1.1	chr5	38819527	38819613	(142718646)	C	L1ME4b	LINE/L1	(102)	790	702	3106726
2882	16.3	5.5	0.5	chr5	38819715	38820674	(142717585)	+	L1MA9	LINE/L1	4735	5789	(523)	3106727
14	19.9	4.2	2.0	chr5	39074435	39074482	(142463777)	+	(CCCCG)n	Simple_repeat	1	50	(0)	3107042
1833	14.4	7.1	8.1	chr5	39366907	39366950	(142171309)	C	THE1D	LTR/ERVL-MaLR	(0)	381	350	3107451
2231	11.3	0.7	0.7	chr5	39366951	39367242	(142171017)	+	AluSx1	SINE/Alu	6	297	(15)	3107452
1833	14.4	7.1	8.1	chr5	39367243	39367427	(142170832)	C	THE1D	LTR/ERVL-MaLR	(32)	349	158	3107451
2498	9.3	0.0	0.7	chr5	39367428	39367729	(142170530)	+	AluSq10	SINE/Alu	1	300	(13)	3107453
13	20.5	5.8	1.8	chr5	40797717	40797768	(140740491)	+	(CGCCCGC)n	Simple_repeat	1	55	(0)	3109433
19	23.3	1.4	5.4	chr5	40798198	40798270	(140739989)	+	G-rich	Low_complexity	1	74	(0)	3109434
2749	2.9	0.0	0.3	chr5	43018574	43018883	(138519376)	+	AluY	SINE/Alu	1	309	(2)	3112413
1661	14.4	0.0	0.0	chr5	43065880	43066122	(138472137)	+	AluSx3	SINE/Alu	65	307	(4)	3112479
2349	6.5	0.0	2.4	chr5	43196347	43196636	(138341623)	+	AluY	SINE/Alu	1	283	(28)	3112718
28	0.0	3.3	0.0	chr5	43196637	43196666	(138341593)	+	(AAAT)n	Simple_repeat	1	31	(0)	3112719
490	19.1	4.5	5.3	chr5	43196685	43196773	(138341486)	C	HAL1	LINE/L1	(103)	2404	2315	3112720
1850	16.7	0.0	4.2	chr5	43196774	43197085	(138341174)	C	AluJo	SINE/Alu	(13)	299	1	3112721
1710	16.0	11.5	13.6	chr5	44939389	44939603	(136598656)	+	MLT2A2	LTR/ERVL	1	202	(251)	3114911
2137	7.1	4.2	7.8	chr5	44939604	44939925	(136598334)	+	AluY	SINE/Alu	2	311	(0)	3114912
1710	16.0	11.5	13.6	chr5	44939926	44940173	(136598086)	+	MLT2A2	LTR/ERVL	203	453	(0)	3114911
2029	14.6	1.9	1.0	chr5	53438002	53438310	(128099949)	C	AluJb	SINE/Alu	(0)	312	1	3120266
17	19.4	1.3	9.0	chr5	53479585	53479661	(128058598)	+	(AGAC)n	Simple_repeat	1	78	(0)	3120329
26	20.5	0.0	0.0	chr5	53480173	53480231	(128058028)	+	(CA)n	Simple_repeat	1	59	(0)	3120330
1895	16.4	7.1	0.5	chr5	54386389	54386770	(127151489)	+	MLT1A1	LTR/ERVL-MaLR	1	457	(0)	3121632
1470	14.5	2.5	4.2	chr5	54386796	54387083	(127151176)	+	L1MC1	LINE/L1	6051	6333	(0)	3121633
14	17.9	5.1	0.0	chr5	55307834	55307872	(126230387)	+	A-rich	Low_complexity	1	41	(0)	3123044
13	8.7	0.0	14.0	chr5	56909853	56909902	(124628357)	+	G-rich	Low_complexity	1	50	(0)	3125753
13	24.4	0.0	4.3	chr5	58459154	58459200	(123079059)	+	A-rich	Low_complexity	1	47	(0)	3128136
13	22.4	2.3	2.2	chr5	58459637	58459680	(123078579)	+	(CGCC)n	Simple_repeat	1	45	(0)	3128137
17	0.0	0.0	0.0	chr5	60699444	60699462	(120838797)	+	(A)n	Simple_repeat	1	19	(0)	3131204
355	34.8	2.1	0.7	chr5	60946184	60946322	(120591937)	+	MIRb	SINE/MIR	18	158	(110)	3131568
4490	27.4	10.1	3.0	chr5	61722379	61723299	(119814960)	C	L1MEc	LINE/L1	(3995)	2420	1389	3132706
30	0.0	0.0	0.0	chr5	61723300	61723327	(119814932)	+	(T)n	Simple_repeat	1	28	(0)	3132707
2136	11.7	0.4	0.0	chr5	61723338	61723602	(119814657)	C	AluSp	SINE/Alu	(46)	267	2	3132708
336	29.9	4.8	9.6	chr5	62284940	62285157	(119253102)	+	MLT1K	LTR/ERVL-MaLR	215	421	(174)	3133496
839	20.7	2.6	0.0	chr5	62285373	62285522	(119252737)	+	AluJb	SINE/Alu	147	300	(12)	3133497
21	18.5	1.3	7.6	chr5	65722126	65722203	(115816056)	+	G-rich	Low_complexity	1	79	(0)	3138300
7074	19.5	15.2	2.4	chr5	72708084	72709608	(108828651)	C	MER52A	LTR/ERV1	(0)	1755	1	3149401
14	14.4	5.0	2.4	chr5	72956052	72956091	(108582168)	+	(GCGGCGC)n	Simple_repeat	1	42	(0)	3149768
2233	9.8	0.0	3.9	chr5	73082877	73083183	(108455076)	C	AluSc5	SINE/Alu	(14)	295	1	3149971
248	6.5	0.0	0.0	chr5	73083187	73083217	(108455042)	C	U2	snRNA	(1)	187	157	3149972
1879	21.2	0.5	4.7	chr5	74497462	74497680	(107040579)	+	MLT1A0	LTR/ERVL-MaLR	150	365	(0)	3152068
401	26.0	6.0	3.4	chr5	74497830	74498008	(107040251)	+	MamGypLTR2b	LTR/Gypsy	670	853	(69)	3152067
25	10.1	2.3	0.0	chr5	74640843	74640885	(106897374)	+	(AGG)n	Simple_repeat	1	44	(0)	3152271
1778	14.8	3.5	1.4	chr5	74868002	74868307	(106669952)	C	AluSq2	SINE/Alu	(0)	313	1	3152630
378	11.4	1.4	0.0	chr5	77804353	77804412	(103733847)	C	L1MA4A	LINE/L1	(183)	6120	6060	3157203
355	30.3	3.1	7.7	chr5	77804444	77804521	(103733738)	+	L1MEd	LINE/L1	1722	1791	(5295)	3157205
1901	15.5	0.3	3.0	chr5	77804522	77804824	(103733435)	+	AluJr	SINE/Alu	1	295	(17)	3157206
355	30.3	3.1	7.7	chr5	77804825	77804913	(103733346)	+	L1MEd	LINE/L1	1792	1881	(5205)	3157205
2293	7.3	3.1	0.7	chr5	78347439	78347725	(103190534)	C	AluY	SINE/Alu	(17)	294	1	3157992
1340	14.2	2.4	1.4	chr5	78347726	78347936	(103190323)	C	AluJb	SINE/Alu	(15)	297	85	3157993
15	19.9	5.4	3.4	chr5	78648612	78648667	(102889592)	+	GA-rich	Low_complexity	1	59	(0)	3158377
1371	20.1	8.9	6.7	chr5	78731395	78731799	(102806460)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	53	3158503
802	28.2	8.5	2.7	chr5	78989681	78990441	(102547818)	C	L1MC4	LINE/L1	(2412)	5470	4670	3158888
14	22.2	2.6	0.0	chr5	78990448	78990486	(102547773)	+	(TTCT)n	Simple_repeat	1	40	(0)	3158892
2091	14.1	0.7	1.0	chr5	78990488	78990793	(102547466)	C	AluJb	SINE/Alu	(7)	305	1	3158893
280	23.9	9.9	1.9	chr5	78990800	78990957	(102547302)	C	L1MC4	LINE/L1	(1594)	4552	4381	3158888
12	18.9	0.0	7.1	chr5	79236030	79236071	(102302188)	+	(CGC)n	Simple_repeat	1	42	(0)	3159397
13082	9.9	0.9	1.8	chr5	79917106	79919883	(101618376)	+	L1PA13	LINE/L1	3955	6647	(14)	3160549
1229	24.9	10.4	5.1	chr5	80370187	80370676	(101167583)	C	LTR33A	LTR/ERVL	(1)	519	1	3161458
2418	19.1	11.5	1.0	chr5	81145399	81145905	(100392354)	+	MLT1F1	LTR/ERVL-MaLR	3	569	(0)	3162747
16	17.1	0.0	4.7	chr5	81522933	81522975	(100015284)	+	A-rich	Low_complexity	1	43	(0)	3163282
15	5.6	0.0	0.0	chr5	82508432	82508450	(99029809)	+	(TG)n	Simple_repeat	1	19	(0)	3164734
525	23.6	4.5	0.0	chr5	82508770	82508896	(99029363)	C	Arthur1B	DNA/hAT-Tip100	(1051)	174	42	3164735
5029	17.7	7.5	0.0	chr5	86768735	86769649	(94768610)	C	MSTA-int	LTR/ERVL-MaLR	(662)	989	1	3170212
985	20.5	0.6	0.0	chr5	86917469	86917639	(94620620)	C	AluJb	SINE/Alu	(7)	305	134	3170416
11	32.9	0.0	0.0	chr5	87267989	87268037	(94270222)	+	(GCAGCG)n	Simple_repeat	1	49	(0)	3170895
12	14.4	6.2	0.0	chr5	87268414	87268445	(94269814)	+	G-rich	Low_complexity	1	34	(0)	3170896
19	26.6	0.0	0.0	chr5	87268723	87268776	(94269483)	+	(CTG)n	Simple_repeat	1	54	(0)	3170897
1732	16.0	1.8	1.8	chr5	87291249	87291530	(94246729)	+	AluJr	SINE/Alu	1	282	(30)	3170941
1968	14.9	7.5	2.6	chr5	87291545	87291922	(94246337)	+	MSTB	LTR/ERVL-MaLR	29	426	(0)	3170942
2484	18.8	2.4	1.1	chr5	88059319	88059770	(93478489)	+	L1PA17	LINE/L1	1	458	(6415)	3171831
3744	17.7	0.4	2.0	chr5	88059771	88060478	(93477781)	+	L1PA17	LINE/L1	5894	6590	(3)	3171831
1607	17.3	0.4	3.2	chr5	90958031	90958313	(90579946)	+	AluJb	SINE/Alu	38	312	(0)	3175434
2804	25.2	7.8	5.7	chr5	90958314	90958487	(90579772)	+	L1ME1	LINE/L1	4052	4205	(2114)	3175433
2376	10.3	0.0	0.0	chr5	93563821	93564150	(87974109)	+	AluY	SINE/Alu	1	311	(0)	3178819
42	15.6	2.3	1.1	chr5	95284570	95284656	(86253603)	+	(CTC)n	Simple_repeat	1	89	(0)	3180924
22	9.5	0.0	0.0	chr5	95284666	95284699	(86253560)	+	(GCG)n	Simple_repeat	1	34	(0)	3180925
2445	28.8	6.8	15.6	chr5	95382558	95383279	(86154980)	C	L2a	LINE/L2	(1495)	1924	1179	3181080
230	22.9	1.4	5.4	chr5	95555504	95555577	(85982682)	C	Charlie9	DNA/hAT-Charlie	(7)	2750	2680	3181311
1850	6.2	0.9	0.0	chr5	95834684	95834908	(85703351)	C	AluSc	SINE/Alu	(9)	300	74	3181736
244	18.6	24.7	0.0	chr5	95984914	95985026	(85553233)	+	MER33	DNA/hAT-Charlie	147	296	(28)	3181949
1945	17.5	0.0	0.6	chr5	95985030	95985343	(85552916)	+	AluJr4	SINE/Alu	1	312	(0)	3181950
182	30.1	0.0	4.0	chr5	95985456	95985531	(85552728)	C	L2c	LINE/L2	(303)	3084	3012	3181951
14	21.5	7.6	1.4	chr5	98773829	98773866	(82764393)	+	(CGCTGCG)n	Simple_repeat	1	80	(25)	3185540
14	17.2	3.9	5.7	chr5	98773867	98773917	(82764342)	+	(GCT)n	Simple_repeat	1	53	(0)	3185541
14	21.5	7.6	1.4	chr5	98773918	98773927	(82764332)	+	(CGCTGCG)n	Simple_repeat	81	105	(0)	3185540
17	30.2	1.2	2.5	chr5	98773973	98774052	(82764207)	+	(GCCCGC)n	Simple_repeat	1	81	(0)	3185542
21	28.1	2.4	1.2	chr5	98774097	98774179	(82764080)	+	(CGCTGC)n	Simple_repeat	1	85	(0)	3185543
10826	7.5	1.7	7.2	chr5	102154759	102156429	(79381830)	+	LTR12C	LTR/ERV1	3	1579	(0)	3189776
28	14.7	3.2	1.6	chr5	103258663	103258724	(78279535)	+	GA-rich	Low_complexity	1	64	(0)	3191197
15	33.0	0.0	1.8	chr5	103259272	103259326	(78278933)	+	(GC)n	Simple_repeat	1	55	(0)	3191198
13	27.9	0.0	0.0	chr5	103259393	103259435	(78278824)	+	(GCTC)n	Simple_repeat	1	43	(0)	3191199
10812	11.8	1.6	0.0	chr5	105762050	105763592	(75774667)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	13	3194236
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
16	0.0	0.0	0.0	chr5	109409818	109409834	(72128425)	+	(A)n	Simple_repeat	1	17	(0)	3198946
13	29.5	0.0	2.0	chr5	109409882	109409932	(72128327)	+	(CCT)n	Simple_repeat	1	51	(0)	3198947
28	7.5	0.0	2.3	chr5	109409942	109409985	(72128274)	+	(GCG)n	Simple_repeat	1	44	(0)	3198948
20	30.0	3.5	0.0	chr5	109689790	109689874	(71848385)	+	(GCG)n	Simple_repeat	1	88	(0)	3199330
17	0.0	0.0	4.0	chr5	109690753	109690777	(71847482)	+	(GGC)n	Simple_repeat	1	25	(0)	3199331
335	22.1	0.0	1.3	chr5	111548665	111548742	(69989517)	+	UCON67	Unknown	31	107	(5)	3201600
2208	11.8	1.0	0.3	chr5	112222943	112223239	(69315020)	C	AluSx	SINE/Alu	(13)	299	1	3202465
15	19.4	0.0	4.4	chr5	112707984	112708028	(68830231)	+	(CTCTCCC)n	Simple_repeat	1	45	(0)	3203153
1653	17.1	1.0	4.9	chr5	113276635	113276938	(68261321)	C	AluJb	SINE/Alu	(20)	292	1	3204046
12	20.0	5.0	0.0	chr5	115262801	115262840	(66275419)	+	(CCGCTCA)n	Simple_repeat	1	42	(0)	3206534
389	28.0	8.6	4.0	chr5	115296014	115296236	(66242023)	C	MIRb	SINE/MIR	(0)	268	35	3206586
12	35.2	0.0	0.0	chr5	115296445	115296501	(66241758)	+	(CGCCCC)n	Simple_repeat	1	57	(0)	3206587
58	22.1	1.5	8.4	chr5	115296655	115296913	(66241346)	+	G-rich	Low_complexity	1	263	(0)	3206588
16	11.1	0.0	0.0	chr5	116085200	116085228	(65453031)	+	(GGTGG)n	Simple_repeat	1	29	(0)	3207708
563	28.1	9.9	2.6	chr5	116085485	116085794	(65452465)	+	MER113	DNA/hAT-Charlie	152	486	(35)	3207709
28	0.0	0.0	0.0	chr5	116541834	116541860	(64996399)	+	(AAAC)n	Simple_repeat	1	27	(0)	3208254
2726	13.8	1.6	5.7	chr5	117713347	117713854	(63824405)	+	LTR76	LTR/ERV1	187	673	(2)	3209952
2645	14.5	1.2	0.2	chr5	117713889	117714316	(63823943)	+	L1PREC2	LINE/L1	4660	5091	(1055)	3209953
8114	13.9	2.6	1.9	chr5	117800285	117802209	(63736050)	+	L1PA16	LINE/L1	3896	5834	(332)	3210069
23	6.7	0.0	2.9	chr5	119082063	119082072	(62456187)	+	(TA)n	Simple_repeat	2	11	(0)	3211810
1010	20.0	0.0	1.5	chr5	119082099	119082278	(62455981)	C	AluJo	SINE/Alu	(1)	311	134	3211811
1748	18.0	0.3	2.0	chr5	119082279	119082578	(62455681)	C	AluJr	SINE/Alu	(17)	295	1	3211812
957	15.9	5.2	0.0	chr5	119401801	119401945	(62136314)	C	AluJb	SINE/Alu	(31)	281	129	3212274
12	20.7	0.0	2.9	chr5	120465303	120465337	(61072922)	+	(CCTT)n	Simple_repeat	1	35	(0)	3213553
14	19.9	0.0	4.5	chr5	120465571	120465614	(61072645)	+	(GGCGG)n	Simple_repeat	1	44	(0)	3213554
1324	27.9	10.2	2.5	chr5	120629480	120630233	(60908026)	C	L1MEd	LINE/L1	(5219)	1867	1050	3213753
411	31.6	3.5	0.0	chr5	120630251	120630418	(60907841)	C	L1MEd	LINE/L1	(6236)	850	677	3213753
304	32.9	8.9	3.4	chr5	120630514	120630692	(60907567)	C	L1MEd	LINE/L1	(6563)	523	334	3213753
4473	16.2	3.8	3.3	chr5	123067056	123067959	(58470300)	C	L1MB5	LINE/L1	(0)	6174	5263	3216890
58	0.0	0.0	0.0	chr5	123285672	123285723	(58252536)	+	(CCCCTT)n	Simple_repeat	1	52	(0)	3217167
16	12.8	2.0	7.8	chr5	123285734	123285783	(58252476)	+	(CTCCCT)n	Simple_repeat	1	51	(0)	3217168
26	17.8	3.1	1.5	chr5	123512385	123512449	(58025810)	+	(CTCG)n	Simple_repeat	1	67	(0)	3217484
42	21.1	1.0	1.0	chr5	127517502	127517601	(54020658)	+	G-rich	Low_complexity	1	101	(0)	3222955
13	26.1	0.0	4.1	chr5	128083381	128083429	(53454830)	+	GA-rich	Low_complexity	1	49	(0)	3223722
20	20.7	1.7	3.3	chr5	128083672	128083730	(53454529)	+	(GCC)n	Simple_repeat	1	60	(0)	3223723
12	22.9	2.3	2.3	chr5	128083748	128083790	(53454469)	+	(GCCC)n	Simple_repeat	1	44	(0)	3223724
33	2.9	0.0	0.0	chr5	128084240	128084274	(53453985)	+	(GCG)n	Simple_repeat	1	35	(0)	3223725
9086	15.0	1.2	0.9	chr5	129055129	129056546	(52481713)	+	L1M1	LINE/L1	2	1423	(6142)	3224885
23	17.1	0.0	0.0	chr5	129461452	129461497	(52076762)	+	(CCGCCC)n	Simple_repeat	1	46	(0)	3225348
12	19.9	2.3	4.4	chr5	131164982	131165025	(50373234)	+	(TCCCC)n	Simple_repeat	1	45	(0)	3227449
538	20.8	17.4	8.0	chr5	131314001	131314233	(50224026)	C	L1M5	LINE/L1	(1496)	4650	4360	3227751
1888	15.7	0.0	2.9	chr5	131314234	131314539	(50223720)	C	AluJr4	SINE/Alu	(14)	298	2	3227752
476	20.8	17.4	8.0	chr5	131314540	131314656	(50223603)	C	L1M5	LINE/L1	(1787)	4359	4260	3227751
33	2.7	0.0	2.5	chr5	132011597	132011636	(49526623)	+	(CCCGCAGC)n	Simple_repeat	1	40	(0)	3228812
15	4.3	4.2	0.0	chr5	132011639	132011662	(49526597)	+	(GCC)n	Simple_repeat	1	25	(0)	3228813
12	30.2	2.8	2.7	chr5	134905078	134905149	(46633110)	+	(GGCCGGC)n	Simple_repeat	1	74	(0)	3233621
313	31.6	10.0	2.7	chr5	137889006	137889194	(43649065)	+	MIRb	SINE/MIR	2	211	(57)	3237696
20	4.2	0.0	0.0	chr5	138025289	138025313	(43512946)	+	(AT)n	Simple_repeat	1	25	(0)	3237941
1072	16.5	4.8	0.0	chr5	138025314	138025471	(43512788)	C	FRAM	SINE/Alu	(10)	166	1	3237942
12	14.9	8.1	0.0	chr5	138025579	138025615	(43512644)	+	(TACATT)n	Simple_repeat	1	40	(0)	3237943
1289	18.6	0.4	0.0	chr5	138025661	138025908	(43512351)	+	L1M2	LINE/L1	4520	4768	(1375)	3237944
652	27.7	9.0	2.6	chr5	139972734	139973319	(41564940)	+	L1ME4a	LINE/L1	5499	5826	(298)	3241794
1950	14.8	0.0	1.4	chr5	139973367	139973656	(41564603)	C	AluJb	SINE/Alu	(21)	291	6	3241796
14	11.2	0.0	6.1	chr5	140346522	140346554	(41191705)	+	(GCCC)n	Simple_repeat	1	33	(0)	3242425
13	20.8	0.0	0.0	chr5	140346653	140346685	(41191574)	+	(GCCCC)n	Simple_repeat	1	33	(0)	3242426
568	14.7	42.1	0.0	chr5	142108140	142108286	(39429973)	C	MER58B	DNA/hAT-Charlie	(3)	338	130	3245268
14	28.5	3.1	1.5	chr5	142108653	142108717	(39429542)	+	G-rich	Low_complexity	1	67	(0)	3245269
13	4.7	0.0	4.2	chr5	142108931	142108954	(39429305)	+	(GCTC)n	Simple_repeat	1	24	(0)	3245270
14	8.2	3.9	0.0	chr5	142109392	142109417	(39428842)	+	(AAAG)n	Simple_repeat	1	27	(0)	3245271
9055	26.2	8.0	6.8	chr5	147461596	147464826	(34073433)	+	ERV3-16A3_I-int	LTR/ERVL	1743	5084	(142)	3254278
706	31.2	4.6	2.5	chr5	148490739	148491017	(33047242)	C	L3	LINE/CR1	(202)	3897	3613	3255966
12	19.6	2.9	0.0	chr5	148491029	148491063	(33047196)	+	(CCATGCA)n	Simple_repeat	1	36	(0)	3255967
478	21.0	22.9	0.1	chr5	149294880	149295032	(32243227)	+	MIRb	SINE/MIR	25	223	(45)	3257400
201	27.2	11.9	2.4	chr5	149729911	149729993	(31808266)	+	MIR3	SINE/MIR	109	200	(8)	3258408
12	22.6	0.0	2.6	chr5	149730149	149730186	(31808073)	+	(CCCCCG)n	Simple_repeat	1	38	(0)	3258409
22	20.1	4.2	2.7	chr5	149730222	149730293	(31807966)	+	(CCTC)n	Simple_repeat	1	75	(0)	3258410
364	17.0	15.9	27.4	chr5	149895669	149895887	(31642372)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	3258776
337	30.7	2.8	2.1	chr5	149895999	149896141	(31642118)	C	MER103C	DNA/hAT-Charlie	(149)	148	5	3258777
11	11.1	6.9	0.0	chr5	150905565	150905593	(30632666)	+	(AATAGA)n	Simple_repeat	1	31	(0)	3260839
11	21.2	2.5	2.4	chr5	151224039	151224078	(30314181)	+	(CCCGCTG)n	Simple_repeat	1	41	(0)	3261431
607	28.5	7.7	0.5	chr5	151224352	151224545	(30313714)	C	MIRb	SINE/MIR	(8)	260	52	3261432
299	31.3	4.5	3.9	chr5	157089176	157089331	(24448928)	C	L2b	LINE/L2	(6)	3369	3213	3272000
1862	7.7	0.4	0.0	chr5	157089334	157089566	(24448693)	+	AluSp	SINE/Alu	80	313	(0)	3272001
379	26.8	2.1	2.1	chr5	157574897	157575037	(23963222)	+	MIR3	SINE/MIR	44	184	(24)	3272956
15	9.7	0.0	0.0	chr5	157575230	157575251	(23963008)	+	(AG)n	Simple_repeat	1	22	(0)	3272957
26	28.6	3.4	2.4	chr5	159099239	159099357	(22438902)	+	(CCG)n	Simple_repeat	1	123	(0)	3275545
30	20.1	0.0	0.0	chr5	159099518	159099575	(22438684)	+	A-rich	Low_complexity	1	58	(0)	3275546
20	21.1	1.9	1.8	chr5	159773036	159773089	(21765170)	+	(TGGA)n	Simple_repeat	1	55	(0)	3276693
14	9.6	0.0	0.0	chr5	159773408	159773430	(21764829)	+	(GCG)n	Simple_repeat	1	23	(0)	3276694
13	31.6	3.2	0.0	chr5	160119325	160119386	(21418873)	+	(CGC)n	Simple_repeat	1	64	(0)	3277395
598	33.4	8.9	5.0	chr5	160453222	160453643	(21084616)	+	L2b	LINE/L2	2935	3374	(1)	3278187
1106	11.6	0.0	1.1	chr5	163390272	163390445	(18147814)	C	L1PA13	LINE/L1	(7)	6156	5985	3282466
1907	23.5	2.0	13.3	chr5	163390446	163390740	(18147519)	C	L1MA4	LINE/L1	(1186)	4960	4661	3282465
1313	15.5	16.0	0.8	chr5	163515765	163516035	(18022224)	C	AluJb	SINE/Alu	(0)	312	1	3282664
1992	14.4	0.3	3.3	chr5	163516044	163516349	(18021910)	C	AluJr	SINE/Alu	(15)	297	1	3282665
2064	4.6	0.0	0.4	chr5	168215447	168215685	(13322574)	+	AluYh3	SINE/Alu	61	298	(13)	3289567
218	27.8	0.0	0.0	chr5	168215901	168215966	(13322293)	+	MIRb	SINE/MIR	199	260	(2)	3289568
2448	8.4	0.0	0.3	chr5	168355212	168355519	(13182740)	+	AluSx1	SINE/Alu	1	307	(5)	3289854
409	35.4	11.2	4.4	chr5	168355520	168355696	(13182563)	C	L2b	LINE/L2	(243)	3132	2951	3289853
28	29.4	0.0	0.0	chr5	168355882	168355957	(13182302)	+	GA-rich	Low_complexity	1	76	(0)	3289855
1859	29.5	7.0	4.2	chr5	170633699	170634279	(10903980)	C	L2a	LINE/L2	(421)	2998	2406	3294003
36	19.8	1.1	2.2	chr5	170861784	170861873	(10676386)	+	(CGCCC)n	Simple_repeat	1	91	(0)	3294424
12	10.0	0.0	0.0	chr5	170861996	170862017	(10676242)	+	(GCCG)n	Simple_repeat	1	22	(0)	3294425
17	12.9	4.5	2.2	chr5	170862120	170862163	(10676096)	+	G-rich	Low_complexity	1	46	(0)	3294426
20	3.3	3.2	0.0	chr5	170862656	170862686	(10675573)	+	(CGGGCG)n	Simple_repeat	1	32	(0)	3294427
306	25.0	20.0	6.8	chr5	170862753	170862928	(10675331)	C	L2c	LINE/L2	(1)	3386	3182	3294428
241	29.6	12.3	4.3	chr5	171978286	171978493	(9559766)	+	L1M6B	LINE/L1	81	307	(62)	3296403
30	0.0	0.0	0.0	chr5	172188064	172188091	(9350168)	+	(GGCTCG)n	Simple_repeat	1	28	(0)	3296889
14	12.5	0.0	0.0	chr5	172188109	172188134	(9350125)	+	(GAG)n	Simple_repeat	1	26	(0)	3296890
13	21.0	5.9	1.9	chr5	172283505	172283555	(9254704)	+	G-rich	Low_complexity	1	54	(0)	3297091
12	17.1	3.8	7.3	chr5	172283768	172283820	(9254439)	+	(CGCTC)n	Simple_repeat	1	55	(0)	3297092
16	32.7	0.0	1.4	chr5	173573442	173573511	(7964748)	+	(ACAATA)n	Simple_repeat	1	70	(0)	3299856
4741	9.6	5.1	0.0	chr5	173666293	173666513	(7871746)	+	L1PB	LINE/L1	4409	4649	(1497)	3300016
1804	14.6	6.4	0.4	chr5	173666514	173666793	(7871466)	C	AluJb	SINE/Alu	(13)	299	2	3300018
417	16.9	2.5	0.0	chr5	173666798	173666874	(7871385)	C	MER102a	DNA/hAT-Charlie	(174)	156	78	3300000
1297	2.1	0.0	0.7	chr5	174382553	174382697	(7155562)	C	AluYj4	SINE/Alu	(167)	144	1	3301406
846	24.4	22.4	0.7	chr5	174382698	174382989	(7155270)	+	MLT1G1	LTR/ERVL-MaLR	221	577	(2)	3301404
3062	18.2	2.8	2.5	chr5	176213619	176214107	(5324152)	+	L1MB8	LINE/L1	4282	4768	(1378)	3304836
1052	17.9	1.2	0.0	chr5	176214108	176214269	(5323990)	+	FRAM	SINE/Alu	1	164	(12)	3304837
3062	18.2	2.8	2.5	chr5	176214270	176214491	(5323768)	+	L1MB8	LINE/L1	4769	4995	(1151)	3304836
958	15.5	7.5	0.0	chr5	176355975	176356135	(5182124)	C	AluJb	SINE/Alu	(9)	303	130	3305083
243	30.6	1.6	0.0	chr5	177005789	177005850	(4532409)	+	MIR	SINE/MIR	12	74	(188)	3306399
537	27.9	3.2	3.2	chr5	177476467	177476655	(4061604)	+	MIR	SINE/MIR	74	262	(0)	3307489
1757	27.4	15.9	2.6	chr5	177498343	177499011	(4039248)	+	L2	LINE/L2	1650	2424	(995)	3307532
2515	6.7	0.0	0.6	chr5	178203528	178203850	(3334409)	+	AluSx3	SINE/Alu	1	311	(0)	3308792
237	28.3	8.1	0.9	chr5	178204069	178204186	(3334073)	+	MIRc	SINE/MIR	28	150	(118)	3308793
6957	18.1	4.0	1.6	chr5	178407139	178408597	(3129662)	+	L1MDa	LINE/L1	797	2290	(4343)	3309120
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
2554	12.7	4.7	0.0	chr5	178710200	178710584	(2827675)	C	LTR57	LTR/ERVL	(7)	404	1	3309681
1461	21.0	7.6	1.8	chr5	178710613	178710946	(2827313)	C	MLT1A0	LTR/ERVL-MaLR	(10)	355	1	3309682
2356	19.5	4.8	3.3	chr5	178858901	178859711	(2678548)	C	L1MA9	LINE/L1	(534)	5778	4872	3309952
17	12.6	4.3	4.1	chr5	178860283	178860329	(2677930)	+	(GCCGCT)n	Simple_repeat	1	49	(0)	3309954
13	25.9	1.9	1.9	chr5	178860395	178860446	(2677813)	+	G-rich	Low_complexity	1	53	(0)	3309955
2004	11.9	1.1	1.1	chr5	178895422	178895706	(2642553)	C	AluSq2	SINE/Alu	(16)	297	13	3310020
12	23.3	0.0	0.0	chr5	178895967	178896001	(2642258)	+	G-rich	Low_complexity	1	35	(0)	3310021
2184	11.3	3.6	0.3	chr5	179077810	179078100	(2460159)	C	AluJb	SINE/Alu	(11)	301	1	3310340
11116	12.6	1.8	0.4	chr5	179399506	179401112	(2137147)	+	THE1C-int	LTR/ERVL-MaLR	3	1631	(0)	3310769
834	10.4	0.0	0.0	chr5	180831416	180831530	(706729)	C	AluSq2	SINE/Alu	(17)	296	182	3313312
383	28.0	9.7	6.9	chr5	180859920	180860341	(677918)	+	L1ME4b	LINE/L1	443	877	(15)	3313357
16	5.3	0.0	0.0	chr5	180860690	180860709	(677550)	+	(A)n	Simple_repeat	1	20	(0)	3313358
187	21.1	7.3	0.0	chr5	181100166	181100203	(438056)	+	MamRTE1	LINE/RTE-BovB	2000	2040	(1772)	3313643
2620	27.3	6.2	6.0	chr5	181133605	181134665	(403594)	+	L1MEg	LINE/L1	556	1631	(5002)	3313709
14	25.2	0.0	5.3	chr5	181246451	181246507	(291752)	+	(GCCCC)n	Simple_repeat	1	57	(0)	3313921
230	4.5	1.1	4.8	chr6	147636	147986	(170657993)	+	(CTAACC)n	Simple_repeat	1	355	(0)	3314431
2053	19.6	3.8	1.5	chr6	147987	149049	(170656930)	C	TAR1	Satellite/telo	(237)	1087	1	3314432
14735	12.9	2.4	1.9	chr6	659399	662886	(170143093)	+	L1PB1	LINE/L1	290	3861	(3006)	3315072
8107	9.0	0.5	0.5	chr6	768450	769973	(170036006)	+	L1PB	LINE/L1	4266	5791	(360)	3315216
6861	11.6	6.5	0.1	chr6	832011	833334	(169972645)	+	L1PA10	LINE/L1	4700	6162	(6)	3315294
15	18.9	3.9	3.7	chr6	1609390	1609441	(169196538)	+	G-rich	Low_complexity	1	54	(0)	3316387
12	22.7	6.4	0.0	chr6	1609987	1610033	(169195946)	+	(CGGCGCC)n	Simple_repeat	1	50	(0)	3316388
371	24.8	6.0	7.6	chr6	1644832	1644930	(169161049)	C	MIRb	SINE/MIR	(119)	149	52	3316417
196	35.3	5.6	5.0	chr6	1832704	1832882	(168973097)	+	L3	LINE/CR1	2318	2497	(1602)	3316637
21	0.0	0.0	0.0	chr6	1833127	1833149	(168972830)	+	(T)n	Simple_repeat	1	23	(0)	3316638
1720	20.2	10.1	0.3	chr6	2179351	2179718	(168626261)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	3317062
1559	17.8	0.0	3.8	chr6	2243844	2244169	(168561810)	C	AluJr4	SINE/Alu	(0)	312	1	3317162
575	22.2	14.2	2.0	chr6	2761540	2761745	(168044234)	C	MIRb	SINE/MIR	(23)	245	18	3317883
51	22.4	3.1	5.0	chr6	2999648	2999841	(167806138)	+	G-rich	Low_complexity	1	200	(0)	3318233
183	28.6	2.0	0.0	chr6	3000305	3000353	(167805626)	C	MIR	SINE/MIR	(88)	174	125	3318234
12	18.6	5.4	0.0	chr6	5004047	5004083	(165801896)	+	(CGCCC)n	Simple_repeat	1	39	(0)	3321336
237	30.0	0.0	3.6	chr6	5306100	5306182	(165499797)	+	Eulor9A	DNA	192	271	(30)	3321836
1068	27.2	9.4	5.5	chr6	6890394	6890833	(163915146)	C	LTR33A	LTR/ERVL	(16)	504	46	3324147
2415	7.3	0.3	0.7	chr6	10693977	10694279	(160111700)	+	AluSp	SINE/Alu	1	302	(11)	3330012
241	34.9	7.8	3.6	chr6	12045032	12045227	(158760752)	+	MamSINE1	SINE/tRNA-RTE	2	206	(84)	3332120
20	10.4	0.0	0.0	chr6	13328502	13328533	(157477446)	+	(CGC)n	Simple_repeat	1	32	(0)	3334060
1637	15.2	8.4	2.4	chr6	13432216	13432505	(157373474)	C	AluJr	SINE/Alu	(2)	310	2	3334247
20	29.9	3.9	1.9	chr6	13580594	13580684	(157225295)	+	(TCTCTT)n	Simple_repeat	1	92	(0)	3334523
1823	13.8	4.8	0.4	chr6	13580685	13580960	(157225019)	C	AluJb	SINE/Alu	(23)	289	1	3334524
493	24.0	7.4	1.3	chr6	15303974	15304125	(155501854)	+	MIR	SINE/MIR	79	240	(22)	3337761
16	9.3	0.0	0.0	chr6	15304304	15304326	(155501653)	+	(C)n	Simple_repeat	1	23	(0)	3337762
409	24.3	13.6	0.0	chr6	15662009	15662160	(155143819)	C	MER5B	DNA/hAT-Charlie	(2)	176	1	3338217
18	20.1	0.0	9.3	chr6	15662681	15662755	(155143224)	+	(GGCGG)n	Simple_repeat	1	75	(0)	3338218
15	30.9	1.4	1.4	chr6	15662984	15663052	(155142927)	+	(CCGGCC)n	Simple_repeat	1	70	(0)	3338219
15	5.6	0.0	0.0	chr6	15663182	15663200	(155142779)	+	(T)n	Simple_repeat	1	19	(0)	3338220
2279	8.5	0.7	4.9	chr6	16128275	16128637	(154677342)	C	AluSq	SINE/Alu	(0)	313	3	3339044
498	27.2	11.5	3.4	chr6	16181278	16181472	(154624507)	+	LTR31	LTR/ERV1	340	557	(62)	3339111
3358	11.5	1.0	3.3	chr6	16181483	16181995	(154623984)	C	LTR12F	LTR/ERV1	(18)	501	1	3339113
12	14.1	7.3	2.3	chr6	17600548	17600588	(153205391)	+	G-rich	Low_complexity	1	44	(0)	3341453
1931	16.9	1.6	1.0	chr6	18193295	18193601	(152612378)	C	AluJo	SINE/Alu	(3)	309	1	3342625
1811	19.3	0.3	0.6	chr6	19206897	19207207	(151598772)	+	AluJb	SINE/Alu	3	312	(0)	3344118
2324	16.2	1.4	1.7	chr6	19207224	19207636	(151598343)	+	L1PA16	LINE/L1	5746	6157	(9)	3344119
8401	14.0	3.2	0.5	chr6	22163686	22166074	(148639905)	C	L1MA5	LINE/L1	(4)	7715	5256	3348926
738	25.9	3.0	0.5	chr6	22847614	22847811	(147958168)	C	MER58A	DNA/hAT-Charlie	(1)	223	21	3349810
1931	25.1	7.5	9.6	chr6	22847817	22848094	(147957885)	+	L1M8	LINE/L1	569	824	(1531)	3349809
1886	15.7	0.7	0.7	chr6	24465258	24465557	(146340422)	+	AluSz	SINE/Alu	1	300	(12)	3351974
15	14.4	0.0	0.0	chr6	24465571	24465594	(146340385)	+	(A)n	Simple_repeat	1	24	(0)	3351975
11	20.7	5.1	0.0	chr6	25992617	25992655	(144813324)	+	(GCGCCT)n	Simple_repeat	1	41	(0)	3354452
13	13.7	2.9	2.9	chr6	26234147	26234180	(144571799)	+	(CACCC)n	Simple_repeat	1	35	(0)	3354869
12	15.7	2.6	5.0	chr6	26234322	26234360	(144571619)	+	G-rich	Low_complexity	1	40	(0)	3354870
623	4.2	0.0	0.0	chr6	26311747	26311818	(144494161)	C	tRNA-Gln-CAA	tRNA	(3)	72	1	3354997
327	17.7	3.1	0.0	chr6	26322418	26322479	(144483500)	C	AluYb8	SINE/Alu	(18)	300	237	3355022
1329	5.7	0.0	0.6	chr6	26322481	26322639	(144483340)	C	AluSq4	SINE/Alu	(153)	158	1	3355023
542	12.1	1.6	2.0	chr6	26340974	26341069	(144464910)	+	MLT1C	LTR/ERVL-MaLR	3	94	(280)	3355061
978	8.8	13.8	0.0	chr6	26341510	26341646	(144464333)	C	AluSg	SINE/Alu	(150)	160	2	3355062
548	0.0	0.0	21.3	chr6	27020346	27020439	(143785540)	+	tRNA-Ile-ATA	tRNA	1	74	(3)	3356155
2293	10.0	1.0	0.0	chr6	27054258	27054556	(143751423)	C	AluSx1	SINE/Alu	(10)	302	1	3356208
863	30.7	5.9	5.3	chr6	27231697	27231771	(143574208)	+	L1ME5	LINE/L1	5259	5333	(861)	3356544
2304	11.1	0.0	0.0	chr6	27231772	27232077	(143573902)	+	AluSx4	SINE/Alu	2	307	(3)	3356545
863	30.7	5.9	5.3	chr6	27232078	27232582	(143573397)	+	L1ME5	LINE/L1	5334	5845	(349)	3356544
11	26.7	4.5	2.9	chr6	27296365	27296430	(143509549)	+	GA-rich	Low_complexity	1	69	(0)	3356669
818	14.6	1.4	1.4	chr6	27389382	27389527	(143416452)	C	MIR	SINE/MIR	(22)	240	95	3356815
4484	7.9	2.5	0.0	chr6	27792718	27793312	(143012667)	C	LTR71B	LTR/ERV1	(0)	610	1	3357601
22	22.4	0.0	0.0	chr6	28789051	28789097	(142016882)	+	A-rich	Low_complexity	1	47	(0)	3359219
2193	10.6	2.9	0.0	chr6	28789104	28789404	(142016575)	+	AluSx	SINE/Alu	2	311	(1)	3359220
11	20.2	2.9	0.0	chr6	28808212	28808245	(141997734)	+	(TTTCTT)n	Simple_repeat	1	35	(0)	3359264
1804	12.6	8.1	0.7	chr6	28808454	28808739	(141997240)	C	AluSx3	SINE/Alu	(2)	309	1	3359265
2013	9.5	6.0	1.8	chr6	28808806	28809090	(141996889)	+	AluSx	SINE/Alu	2	299	(13)	3359266
1222	27.6	10.1	5.7	chr6	29004718	29005245	(141800734)	+	L2a	LINE/L2	2871	3426	(0)	3359620
327	4.5	0.0	2.3	chr6	29005291	29005334	(141800645)	+	AluSq2	SINE/Alu	259	301	(12)	3359621
8346	13.3	7.8	2.8	chr6	29014953	29016447	(141789532)	+	LTR12C	LTR/ERV1	4	1579	(0)	3359638
473	31.1	11.7	7.4	chr6	29016881	29017519	(141788460)	+	MamGypLTR3	LTR/Gypsy	208	877	(17)	3359639
345	26.5	3.0	0.0	chr6	29068096	29068193	(141737786)	C	MER58D	DNA/hAT-Charlie	(0)	386	286	3359703
18	18.5	0.0	7.8	chr6	29068194	29068257	(141737722)	+	A-rich	Low_complexity	1	64	(0)	3359704
664	23.0	1.2	3.0	chr6	29068295	29068460	(141737519)	+	L1M5	LINE/L1	5465	5627	(552)	3359705
5499	6.7	0.8	3.7	chr6	29068462	29068857	(141737122)	+	L1PB1	LINE/L1	4609	5003	(1143)	3359706
2420	9.1	0.0	0.0	chr6	29068858	29069153	(141736826)	+	AluY	SINE/Alu	2	297	(14)	3359707
10147	15.3	0.8	0.7	chr6	30283276	30284904	(140521075)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	3361376
14	7.8	3.7	0.0	chr6	30914010	30914036	(139891943)	+	(GGCGG)n	Simple_repeat	1	28	(0)	3362489
372	30.7	12.5	2.9	chr6	31863785	31863982	(138941997)	+	MIR	SINE/MIR	15	228	(34)	3364052
34	17.1	0.0	1.4	chr6	32308919	32308945	(138497034)	+	(TTCTCC)n	Simple_repeat	1	27	(0)	3364712
1913	17.1	2.6	0.0	chr6	32308946	32309249	(138496730)	C	AluJb	SINE/Alu	(0)	312	1	3364713
34	17.1	0.0	1.4	chr6	32309250	32309290	(138496689)	+	(TTCTCC)n	Simple_repeat	4	44	(0)	3364714
3959	23.4	3.6	0.5	chr6	33036154	33036935	(137769044)	C	L1M4	LINE/L1	(6710)	1169	363	3365782
366	12.9	0.0	6.7	chr6	33364482	33364556	(137441423)	C	L1MB5	LINE/L1	(286)	5888	5819	3366296
1011	18.3	1.1	0.6	chr6	33364557	33364737	(137441242)	C	AluJb	SINE/Alu	(11)	301	120	3366297
29	18.3	1.6	0.0	chr6	34145564	34145625	(136660354)	+	(GAGC)n	Simple_repeat	1	63	(0)	3367713
7489	11.6	5.0	0.7	chr6	35106285	35107442	(135698537)	C	HERVK22-int	LTR/ERVK	(5626)	1211	1	3369731
506	23.3	0.8	9.2	chr6	36874322	36874463	(133931516)	+	L2c	LINE/L2	3258	3387	(0)	3373481
23	24.5	3.5	2.3	chr6	37170158	37170242	(133635737)	+	(GGC)n	Simple_repeat	1	88	(0)	3374136
32	0.0	0.0	0.0	chr6	37170248	37170277	(133635702)	+	(GCA)n	Simple_repeat	1	30	(0)	3374137
35	20.9	0.0	0.0	chr6	37170434	37170510	(133635469)	+	(CAGCCA)n	Simple_repeat	1	77	(0)	3374138
1889	22.5	12.6	3.2	chr6	37869812	37870159	(132935820)	C	L1M5	LINE/L1	(2916)	3230	2868	3375532
1060	12.5	9.1	0.0	chr6	37870160	37870319	(132935660)	+	AluJr	SINE/Alu	134	309	(3)	3375535
2375	9.7	1.0	0.0	chr6	37870320	37870618	(132935361)	+	AluSx	SINE/Alu	1	302	(10)	3375536
1055	31.1	2.6	1.1	chr6	38783837	38784210	(132021769)	C	ERVL-E-int	LTR/ERVL	(819)	4848	4469	3376976
236	32.4	1.4	0.0	chr6	39178616	39178683	(131627296)	C	L3	LINE/CR1	(84)	4015	3947	3377602
13	15.9	0.0	9.8	chr6	41073761	41073811	(129732168)	+	(CGCC)n	Simple_repeat	1	51	(0)	3380583
659	23.9	2.3	0.6	chr6	41318581	41318748	(129487231)	+	MER5B	DNA/hAT-Charlie	7	177	(1)	3380943
1536	20.1	10.9	9.4	chr6	41349219	41349713	(129456266)	+	MER21C	LTR/ERVL	19	481	(457)	3380989
14	30.2	3.6	2.3	chr6	41895231	41895314	(128910665)	+	(CCTCCCC)n	Simple_repeat	1	87	(0)	3382036
1565	18.8	4.4	2.8	chr6	42586083	42586370	(128219609)	+	AluJo	SINE/Alu	1	293	(19)	3383571
672	23.5	7.4	5.4	chr6	42586371	42586461	(128219518)	C	L1MEf	LINE/L1	(3410)	2736	2659	3383570
1052	22.7	5.8	8.4	chr6	42586474	42586822	(128219157)	C	L1MEf	LINE/L1	(4097)	2145	1796	3383570
1472	13.5	1.8	0.0	chr6	42995551	42995765	(127810214)	C	AluSx3	SINE/Alu	(10)	301	83	3384498
630	17.0	2.0	0.0	chr6	42995766	42995865	(127810114)	C	AluJb	SINE/Alu	(62)	250	149	3384499
1905	8.4	6.8	0.0	chr6	42995882	42996143	(127809836)	C	AluYe5	SINE/Alu	(29)	281	1	3384500
197	19.6	5.1	1.8	chr6	44120704	44120760	(126685219)	+	L2b	LINE/L2	3317	3375	(0)	3386601
13	14.9	5.1	2.4	chr6	45377470	45377508	(125428471)	+	(CAGCC)n	Simple_repeat	1	41	(0)	3388537
14	13.7	3.1	0.0	chr6	45377643	45377674	(125428305)	+	G-rich	Low_complexity	1	33	(0)	3388538
41	17.1	3.5	0.0	chr6	46734307	46734391	(124071588)	+	GA-rich	Low_complexity	1	88	(0)	3390625
16	0.0	4.2	4.0	chr6	46734392	46734415	(124071564)	+	(GT)n	Simple_repeat	1	25	(0)	3390626
94	0.0	1.1	1.1	chr6	46734416	46734503	(124071476)	+	(GA)n	Simple_repeat	1	89	(0)	3390627
760	27.3	1.1	0.0	chr6	47168754	47168929	(123637050)	C	MER45A	DNA/hAT-Tip100	(0)	178	1	3391345
1491	16.7	5.5	3.0	chr6	47433917	47434179	(123371800)	+	AluJo	SINE/Alu	19	288	(24)	3391746
651	24.8	6.8	2.8	chr6	47434182	47434463	(123371516)	C	Tigger13a	DNA/TcMar-Tigger	(84)	687	394	3391747
56	0.0	0.0	0.0	chr6	47660261	47660308	(123145671)	+	(AC)n	Simple_repeat	1	48	(0)	3392077
329	32.4	0.0	0.0	chr6	54104819	54104926	(116701053)	+	MER103C	DNA/hAT-Charlie	40	147	(150)	3401204
347	34.9	0.0	2.3	chr6	54104912	54105040	(116700939)	+	MER103C	DNA/hAT-Charlie	172	297	(0)	3401205
326	28.8	5.5	0.9	chr6	54105049	54105153	(116700826)	C	MIR3	SINE/MIR	(62)	146	37	3401206
25	0.0	0.0	0.0	chr6	56542429	56542455	(114263524)	+	(A)n	Simple_repeat	1	27	(0)	3404286
14	13.6	0.0	5.6	chr6	57089809	57089844	(113716135)	+	(AACCA)n	Simple_repeat	1	36	(0)	3405115
2374	7.8	0.7	1.1	chr6	57240092	57240400	(113565579)	C	AluSp	SINE/Alu	(0)	313	1	3405333
812	25.4	11.9	1.0	chr6	57240493	57240798	(113565181)	+	HAL1	LINE/L1	1689	2032	(475)	3405334
4791	17.9	2.8	3.7	chr6	57685697	57686803	(113119176)	+	L1M2	LINE/L1	4548	5644	(1201)	3405966
598	18.9	0.7	9.2	chr6	57686806	57686957	(113119022)	+	L1MA8	LINE/L1	4837	4975	(1168)	3405970
5570	17.8	2.6	2.8	chr6	66269720	66270742	(104535237)	+	L1MA4	LINE/L1	4472	5496	(804)	3414065
1977	13.5	2.0	0.3	chr6	66993900	66994188	(103811791)	+	AluSc	SINE/Alu	3	296	(13)	3414971
13	16.6	1.8	8.8	chr6	68560241	68560296	(102245683)	+	A-rich	Low_complexity	1	57	(0)	3416822
373	31.2	6.5	4.9	chr6	69083387	69083612	(101722367)	C	L2a	LINE/L2	(1)	3425	3196	3417492
12	20.2	2.9	0.0	chr6	70668264	70668297	(100137682)	+	(GGCG)n	Simple_repeat	1	35	(0)	3419586
17	20.2	2.1	2.1	chr6	72622248	72622294	(98183685)	+	(GCG)n	Simple_repeat	1	48	(0)	3422094
1740	16.2	4.1	0.0	chr6	73632032	73632314	(97173665)	+	AluJo	SINE/Alu	11	305	(7)	3423942
469	25.1	11.6	2.4	chr6	73795700	73795874	(97010105)	+	MIRb	SINE/MIR	2	203	(65)	3424246
236	27.9	18.1	7.9	chr6	75331648	75331799	(95474180)	C	MER91A	DNA/hAT-Tip100	(12)	184	14	3426057
1614	20.2	4.0	2.9	chr6	75331806	75332156	(95473823)	+	MLT1A0	LTR/ERVL-MaLR	11	365	(0)	3426058
30	30.4	2.2	2.8	chr6	75601788	75601926	(95204053)	+	(GGC)n	Simple_repeat	1	142	(0)	3426464
340	30.1	7.7	6.3	chr6	78490719	78490924	(92315055)	+	MLT1O	LTR/ERVL-MaLR	25	233	(309)	3430042
390	12.2	1.3	2.6	chr6	79760567	79760642	(91045337)	+	L1MB2	LINE/L1	6088	6162	(9)	3431720
1944	17.2	0.0	0.7	chr6	79760643	79760944	(91045035)	C	AluJr4	SINE/Alu	(12)	300	1	3431721
306	21.7	7.8	6.2	chr6	79760971	79761083	(91044896)	C	L1ME4b	LINE/L1	(334)	558	444	3431722
3302	10.6	0.2	1.2	chr6	81001613	81002109	(89803870)	+	L1PA10	LINE/L1	5675	6166	(2)	3433249
470	29.5	7.3	4.4	chr6	81002183	81002409	(89803570)	+	MIR	SINE/MIR	28	261	(1)	3433250
1508	20.8	0.0	5.0	chr6	82343057	82343374	(88462605)	C	AluJr	SINE/Alu	(10)	302	1	3435036
31	23.0	0.9	4.7	chr6	83067992	83068096	(87737883)	+	G-rich	Low_complexity	1	106	(0)	3436015
15	0.0	6.2	5.9	chr6	85679150	85679181	(85126798)	+	(GCTG)n	Simple_repeat	1	34	(0)	3439430
12	8.0	7.4	0.0	chr6	87322572	87322598	(83483381)	+	(GGCGG)n	Simple_repeat	1	29	(0)	3441372
1245	16.3	3.4	6.2	chr6	89284833	89284851	(81521128)	+	L1ME3	LINE/L1	6141	6161	(1)	3444501
6380	9.8	5.1	0.8	chr6	90270317	90271370	(80534609)	+	L1PB	LINE/L1	4220	5321	(825)	3446131
2152	9.7	0.0	0.4	chr6	92647085	92647363	(78158616)	+	AluSc8	SINE/Alu	34	311	(0)	3449140
15	17.6	0.0	4.8	chr6	95577454	95577495	(75228484)	+	(GCCCC)n	Simple_repeat	1	42	(0)	3452635
16	25.0	0.0	2.0	chr6	96837391	96837439	(73968540)	+	GA-rich	Low_complexity	1	49	(0)	3454211
14	26.7	0.0	0.0	chr6	96837420	96837460	(73968519)	+	(GGC)n	Simple_repeat	1	41	(0)	3454212
819	24.7	6.4	0.8	chr6	99514769	99515005	(71290974)	C	MIR	SINE/MIR	(4)	258	8	3457764
13	11.2	4.5	6.5	chr6	99520982	99521025	(71284954)	+	(GCCGGAG)n	Simple_repeat	1	46	(0)	3457774
17	13.2	0.0	2.9	chr6	99521007	99521041	(71284938)	+	GA-rich	Low_complexity	1	35	(0)	3457775
15	16.9	0.0	2.9	chr6	100881024	100881058	(69924921)	+	(CCT)n	Simple_repeat	1	35	(0)	3459592
13	20.8	0.0	0.0	chr6	100881277	100881309	(69924670)	+	(CAGA)n	Simple_repeat	1	33	(0)	3459593
15	9.3	7.8	5.5	chr6	100881405	100881455	(69924524)	+	(CCTCCG)n	Simple_repeat	1	55	(0)	3459594
12	17.9	3.1	0.0	chr6	107116056	107116087	(63689892)	+	(CACA)n	Simple_repeat	1	33	(0)	3468220
1127	22.4	5.8	5.8	chr6	107443926	107444033	(63361946)	C	MIR	SINE/MIR	(1)	261	156	3468864
1956	17.9	0.3	1.0	chr6	107444034	107444330	(63361649)	C	AluJr	SINE/Alu	(17)	295	1	3468865
1127	22.4	5.8	5.8	chr6	107444331	107444482	(63361497)	C	MIR	SINE/MIR	(107)	155	1	3468864
423	29.0	1.9	3.1	chr6	107968986	107969114	(62836865)	C	LTR89	LTR/ERVL?	(196)	683	556	3469678
772	16.9	7.2	1.3	chr6	107969244	107969399	(62836580)	C	MER5A1	DNA/hAT-Charlie	(0)	166	1	3469680
41	0.0	0.0	0.0	chr6	108197291	108197325	(62608654)	+	(TG)n	Simple_repeat	1	35	(0)	3470126
873	21.6	2.4	0.0	chr6	108197344	108197534	(62608445)	+	AluJo	SINE/Alu	138	312	(0)	3470127
2252	12.2	0.0	1.0	chr6	108307001	108307311	(62498668)	C	AluSg	SINE/Alu	(2)	308	1	3470371
1458	15.5	0.4	0.9	chr6	108307397	108307622	(62498357)	C	AluJb	SINE/Alu	(0)	312	88	3470372
1574	19.8	13.2	0.0	chr6	108307627	108308102	(62497877)	C	L1M5	LINE/L1	(460)	5713	5188	3470373
14	18.8	0.0	2.6	chr6	109094144	109094181	(61711798)	+	A-rich	Low_complexity	1	38	(0)	3471642
1070	17.9	0.0	0.0	chr6	109528841	109529002	(61276977)	+	AluJr	SINE/Alu	137	298	(14)	3472314
1081	18.4	10.1	6.0	chr6	110879081	110879363	(59926616)	+	AluJb	SINE/Alu	1	296	(16)	3474529
15	27.4	0.0	0.0	chr6	111259600	111259647	(59546332)	+	(AGGCGG)n	Simple_repeat	1	48	(0)	3475317
1097	14.7	10.9	1.1	chr6	112478834	112479023	(58326956)	+	AluJr	SINE/Alu	82	292	(20)	3477174
13	20.2	4.3	2.0	chr6	112479062	112479108	(58326871)	+	(ATATATA)n	Simple_repeat	1	49	(0)	3477175
20	15.5	3.9	1.9	chr6	113970321	113970372	(56835607)	+	G-rich	Low_complexity	1	54	(0)	3479420
14	15.3	2.6	2.6	chr6	113970813	113970850	(56835129)	+	(GCCCG)n	Simple_repeat	1	39	(0)	3479421
26	0.0	0.0	0.0	chr6	113970946	113970970	(56835009)	+	(CTG)n	Simple_repeat	1	25	(0)	3479422
1505	20.4	7.9	0.0	chr6	116193789	116194068	(54611911)	+	AluJb	SINE/Alu	1	304	(8)	3482229
295	31.0	8.3	5.6	chr6	116194202	116194399	(54611580)	+	HAL1ME	LINE/L1	1873	2076	(389)	3482230
2200	14.4	0.0	0.3	chr6	116673897	116674233	(54131746)	+	AluSz	SINE/Alu	1	312	(0)	3482919
1960	15.9	0.0	1.0	chr6	117446101	117446401	(53359578)	+	AluJo	SINE/Alu	1	298	(14)	3483902
30	0.0	0.0	0.0	chr6	117446491	117446516	(53359463)	+	(GT)n	Simple_repeat	1	26	(0)	3483903
305	27.8	12.9	8.8	chr6	118651557	118651749	(52154230)	C	L1M4b	LINE/L1	(6265)	602	401	3485446
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
2432	14.4	9.9	0.4	chr6	119382161	119382619	(51423360)	+	LTR22E	LTR/ERVK	1	507	(0)	3486541
14537	10.6	1.4	0.7	chr6	119382620	119384552	(51421427)	C	L1MA3	LINE/L1	(1091)	6474	4526	3486537
11729	12.6	1.1	1.2	chr6	120666102	120666469	(50139510)	C	L1PA12	LINE/L1	(833)	5313	4943	3488054
27	0.0	0.0	0.0	chr6	120666470	120666495	(50139484)	+	(T)n	Simple_repeat	1	26	(0)	3488058
12341	12.6	1.2	1.8	chr6	120666496	120668133	(50137846)	C	L1PA12	LINE/L1	(1204)	4942	3320	3488054
417	33.3	3.1	2.5	chr6	121355509	121355865	(49450114)	+	HAL1	LINE/L1	1034	1392	(1115)	3488848
19	8.3	0.0	0.0	chr6	121355894	121355919	(49450060)	+	(A)n	Simple_repeat	1	26	(0)	3488849
1246	27.9	10.2	7.4	chr6	121355942	121356739	(49449240)	+	HAL1	LINE/L1	1672	2494	(13)	3488848
440	22.6	0.0	2.4	chr6	122089105	122089188	(48716791)	+	AluJr	SINE/Alu	2	83	(229)	3489974
181	29.5	1.3	7.1	chr6	122089207	122089290	(48716689)	+	X9_LINE	LINE/L1	52	130	(806)	3489975
3179	24.2	4.8	6.6	chr6	122487823	122488452	(48317527)	C	L1MC4	LINE/L1	(560)	7482	6878	3490474
1188	17.6	1.0	2.4	chr6	122488453	122488657	(48317322)	C	AluJb	SINE/Alu	(34)	278	77	3490476
1376	23.6	6.2	0.3	chr6	122488676	122489023	(48316956)	C	L1MC4	LINE/L1	(1208)	6834	6465	3490474
17	15.7	5.5	6.5	chr6	122610433	122610505	(48195474)	+	(GAGCGC)n	Simple_repeat	1	77	(0)	3490622
3075	19.3	5.7	0.7	chr6	123313049	123313692	(47492287)	C	L1PA10	LINE/L1	(4786)	2550	1911	3491525
6122	10.1	1.9	0.1	chr6	123313655	123315012	(47490967)	+	L1PA12	LINE/L1	4779	6163	(5)	3491526
20	0.0	0.0	0.0	chr6	125301443	125301464	(45504515)	+	(AC)n	Simple_repeat	1	22	(0)	3494126
29	0.0	0.0	0.0	chr6	125301483	125301507	(45504472)	+	(CA)n	Simple_repeat	1	25	(0)	3494127
57	41.1	0.0	1.4	chr6	125301977	125302258	(45503721)	+	(CCTCCC)n	Simple_repeat	1	282	(0)	3494128
9460	11.6	1.8	0.4	chr6	126654266	126655624	(44150355)	+	THE1B-int	LTR/ERVL-MaLR	1	1378	(202)	3495881
15	10.1	2.9	2.9	chr6	127266776	127266809	(43539170)	+	G-rich	Low_complexity	1	35	(0)	3496650
11	28.1	0.0	5.3	chr6	127343105	127343161	(43462818)	+	(CCGCGGC)n	Simple_repeat	1	57	(0)	3496758
15	8.8	0.0	0.0	chr6	127515788	127515811	(43290168)	+	(GCC)n	Simple_repeat	1	24	(0)	3496998
14	33.6	1.5	0.0	chr6	127516059	127516125	(43289854)	+	(CCCCCT)n	Simple_repeat	1	68	(0)	3496999
339	23.4	9.9	2.3	chr6	127641397	127641527	(43164452)	+	L1MD1	LINE/L1	4793	4934	(1710)	3497152
6368	17.7	2.1	3.4	chr6	127641540	127642777	(43163202)	+	L1MA4	LINE/L1	1251	2474	(4091)	3497153
446	30.7	20.2	3.1	chr6	129375327	129375972	(41430007)	+	L2	LINE/L2	1823	2607	(812)	3499365
220	34.3	13.8	2.9	chr6	129375977	129376150	(41429829)	+	L2	LINE/L2	2729	2924	(495)	3499365
338	31.2	3.5	0.0	chr6	129536621	129536729	(41269250)	C	MER135	DNA	(104)	124	12	3499580
210	21.7	2.1	0.0	chr6	130559139	130559184	(40246795)	+	MIR3	SINE/MIR	77	123	(85)	3501070
24	28.1	2.5	4.1	chr6	131135502	131135621	(39670358)	+	(GCTGCC)n	Simple_repeat	1	123	(0)	3501897
18	24.2	3.3	5.3	chr6	131135644	131135734	(39670245)	+	(CCGCCT)n	Simple_repeat	1	94	(0)	3501898
232	28.7	5.7	5.7	chr6	131373409	131373530	(39432449)	+	LTR88c	LTR/Gypsy?	45	166	(696)	3502227
3981	25.9	3.2	2.7	chr6	131517483	131520946	(39285033)	C	L1PA15-16	LINE/L1	(3217)	3695	344	3502467
323	23.9	0.0	0.0	chr6	132440912	132440978	(38365001)	+	Arthur1B	DNA/hAT-Tip100	9	75	(1150)	3503837
288	20.3	0.0	0.0	chr6	132876851	132876909	(37929070)	+	MER61E	LTR/ERV1	144	202	(818)	3504483
257	22.2	14.9	0.0	chr6	132876915	132876977	(37929002)	+	MER51A	LTR/ERV1	208	281	(353)	3504484
242	25.4	0.0	0.0	chr6	132876956	132877010	(37928969)	+	MER51A	LTR/ERV1	139	193	(289)	3504484
1024	24.4	11.6	0.0	chr6	132877036	132877326	(37928653)	+	LTR27D	LTR/ERV1	207	535	(80)	3504485
585	28.3	12.0	3.5	chr6	132877353	132877641	(37928338)	+	L4_A_Mam	LINE/RTE-X	4482	4798	(192)	3504486
278	35.7	13.7	2.2	chr6	136120329	136120683	(34685296)	C	L2	LINE/L2	(1556)	1863	1462	3509391
2190	9.8	3.5	0.0	chr6	136287748	136288024	(34517955)	+	AluSx1	SINE/Alu	1	287	(25)	3509621
555	14.3	0.0	2.4	chr6	136288262	136288345	(34517634)	C	AluJb	SINE/Alu	(24)	288	207	3509622
13	20.9	1.0	5.2	chr6	136822627	136822692	(33983287)	+	G-rich	Low_complexity	1	63	(0)	3510537
14	20.6	0.0	6.0	chr6	136822798	136822847	(33983132)	+	(GAGGCG)n	Simple_repeat	1	50	(0)	3510538
787	23.7	7.4	3.3	chr6	136882938	136883208	(33922771)	C	ORSL-2b	DNA/hAT-Tip100	(44)	464	182	3510634
504	31.9	9.8	1.8	chr6	137514534	137514750	(33291229)	C	MIR	SINE/MIR	(14)	248	13	3511560
10830	13.1	1.1	0.2	chr6	140019768	140021383	(30784596)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	3515572
3041	18.0	6.0	3.7	chr6	140897539	140898219	(29907760)	C	MER61-int	LTR/ERV1	(4518)	699	2	3516606
1252	19.8	7.9	2.8	chr6	140898220	140898542	(29907437)	C	MER61A	LTR/ERV1	(0)	341	1	3516606
1427	27.2	5.2	3.3	chr6	141780809	141781171	(29024808)	C	L1ME2	LINE/L1	(1301)	6153	5780	3517680
1723	23.9	9.4	2.9	chr6	141781172	141781240	(29024739)	C	MLT2B1	LTR/ERVL	(0)	520	453	3517686
60	0.0	0.0	0.0	chr6	141781241	141781291	(29024688)	+	(TG)n	Simple_repeat	1	51	(0)	3517687
1723	23.9	9.4	2.9	chr6	141781292	141781704	(29024275)	C	MLT2B1	LTR/ERVL	(68)	452	3	3517686
12	9.3	0.0	4.0	chr6	142301821	142301845	(28504134)	+	(CGC)n	Simple_repeat	1	25	(0)	3518336
2230	12.5	0.0	0.7	chr6	143213489	143213816	(27592163)	C	AluSx1	SINE/Alu	(0)	312	1	3519542
1360	21.9	13.7	3.0	chr6	143364670	143365044	(27440935)	C	Arthur1B	DNA/hAT-Tip100	(187)	1038	627	3519757
2107	17.0	0.0	0.0	chr6	143881270	143881580	(26924399)	+	AluJb	SINE/Alu	2	312	(0)	3520550
1154	23.0	4.0	5.3	chr6	143881581	143881665	(26924314)	C	L1MD2	LINE/L1	(539)	5820	5743	3520549
231	20.3	13.2	0.0	chr6	143881746	143881804	(26924175)	+	7SK	RNA	33	100	(231)	3520551
12	16.9	0.0	0.0	chr6	143903013	143903039	(26902940)	+	(TCTC)n	Simple_repeat	1	27	(0)	3520580
207	25.4	12.2	3.1	chr6	144021870	144021967	(26784012)	C	MIRb	SINE/MIR	(1)	207	109	3520720
10733	17.1	4.4	1.2	chr6	144022102	144022498	(26783481)	+	L1MC3	LINE/L1	5198	5608	(2177)	3520721
731	4.8	0.0	0.0	chr6	144216547	144216629	(26589350)	+	tRNA-Leu-TTA	tRNA	1	83	(3)	3521045
13	18.2	2.6	2.5	chr6	144285043	144285081	(26520898)	+	G-rich	Low_complexity	1	40	(0)	3521175
830	22.5	1.3	2.5	chr6	144890992	144891228	(25914751)	+	L1M4	LINE/L1	5285	5518	(661)	3522022
1237	29.1	4.0	3.4	chr6	146440534	146441009	(24364970)	C	LTR16C	LTR/ERVL	(2)	487	9	3524026
16	26.4	1.8	1.7	chr6	146441032	146441062	(24364917)	+	GA-rich	Low_complexity	1	58	(0)	3524027
17	12.7	0.0	0.0	chr6	146441063	146441088	(24364891)	+	(AG)n	Simple_repeat	1	26	(0)	3524028
2856	18.2	2.7	1.3	chr6	147166341	147166891	(23639088)	+	MER89	LTR/ERV1	1	559	(0)	3525033
13	32.8	0.0	0.0	chr6	147203730	147203779	(23602200)	+	(GCC)n	Simple_repeat	1	50	(0)	3525091
13	26.1	0.0	0.0	chr6	148244655	148244691	(22561288)	+	(GCT)n	Simple_repeat	1	37	(0)	3526540
60	1.8	0.0	0.0	chr6	148244905	148244960	(22561019)	+	(TG)n	Simple_repeat	1	56	(0)	3526541
26	3.3	0.0	0.0	chr6	148244961	148244991	(22560988)	+	(AG)n	Simple_repeat	1	31	(0)	3526542
43	14.5	0.0	0.0	chr6	148343092	148343167	(22462812)	+	(CCGGAG)n	Simple_repeat	1	76	(0)	3526766
14	5.0	0.0	0.0	chr6	149718040	149718060	(21087919)	+	(GCC)n	Simple_repeat	1	21	(0)	3529015
11104	10.0	0.7	1.6	chr6	149908003	149909595	(20896384)	+	THE1B-int	LTR/ERVL-MaLR	2	1580	(0)	3529385
1072	28.7	12.6	2.1	chr6	150169718	150170238	(20635741)	C	MLT1G1	LTR/ERVL-MaLR	(4)	587	1	3529792
656	30.1	9.9	4.9	chr6	152136929	152137337	(18668642)	+	L1ME5	LINE/L1	5760	6191	(3)	3533096
6983	12.1	3.3	3.0	chr6	152802125	152804138	(18001841)	C	L1PA16	LINE/L1	(26)	6140	4121	3534035
370	26.7	14.9	5.3	chr6	153342916	153343314	(17462665)	C	L1MEd	LINE/L1	(2162)	3984	3541	3534792
708	11.8	1.9	0.0	chr6	153610403	153610504	(17195475)	+	AluYj4	SINE/Alu	204	307	(4)	3535144
1037	15.6	0.0	2.4	chr6	153610688	153610854	(17195125)	+	AluJo	SINE/Alu	150	312	(0)	3535145
373	33.0	4.9	3.3	chr6	154487301	154487541	(16318438)	C	MIRb	SINE/MIR	(16)	252	8	3536480
332	32.2	10.2	5.5	chr6	156117563	156117815	(14688164)	C	L3	LINE/CR1	(773)	3326	3061	3539017
1269	20.2	3.4	2.3	chr6	156636986	156637249	(14168730)	+	L1MDa	LINE/L1	33	299	(6334)	3539743
363	31.3	0.0	8.8	chr6	156637548	156637729	(14168250)	+	LTR91	LTR/ERVL	34	199	(0)	3539744
9750	13.2	2.2	2.0	chr6	156673693	156676251	(14129728)	+	L1MA4	LINE/L1	3728	6289	(11)	3539796
13	4.7	0.0	4.2	chr6	157275099	157275122	(13530857)	+	(GGGA)n	Simple_repeat	1	24	(0)	3540654
12	27.6	3.9	0.0	chr6	157275184	157275235	(13530744)	+	(GAGGCGG)n	Simple_repeat	1	54	(0)	3540655
769	26.2	11.9	11.1	chr6	157275258	157275528	(13530451)	C	MLT1C	LTR/ERVL-MaLR	(38)	429	125	3540656
212	30.5	3.0	8.6	chr6	157324323	157324462	(13481517)	+	L2c	LINE/L2	3256	3387	(0)	3540715
1026	18.5	0.0	3.5	chr6	157835410	157835546	(12970433)	C	AluJb	SINE/Alu	(9)	303	170	3541557
2015	13.0	9.6	1.7	chr6	157835547	157835891	(12970088)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3541558
2195	10.9	0.0	0.3	chr6	157963511	157963850	(12842129)	C	AluSx1	SINE/Alu	(0)	312	1	3541738
578	23.3	3.0	0.6	chr6	157969061	157969220	(12836759)	C	MER57A-int	LTR/ERV1	(5697)	490	327	3541745
672	29.1	5.2	8.6	chr6	157969192	157969529	(12836450)	C	LTR49-int	LTR/ERV1	(4089)	2242	1917	3541751
1173	21.3	15.0	1.9	chr6	157969545	157969644	(12836335)	C	LTR54B	LTR/ERV1	(2)	496	393	3541752
279	35.6	3.1	9.0	chr6	158737844	158738030	(12067949)	+	MIR3	SINE/MIR	3	178	(90)	3543047
323	32.5	14.9	3.8	chr6	158738193	158738655	(12067324)	+	L2	LINE/L2	1342	1881	(1538)	3543048
504	31.8	8.1	9.5	chr6	158826107	158826449	(11979530)	+	L2b	LINE/L2	2918	3256	(119)	3543183
1420	16.8	1.1	6.6	chr6	158826450	158826735	(11979244)	C	AluJb	SINE/Alu	(2)	310	41	3543184
1060	21.5	2.7	8.6	chr6	158846954	158847268	(11958711)	C	MLT1B	LTR/ERVL-MaLR	(91)	299	4	3543226
2394	10.2	0.3	0.0	chr6	158847443	158847747	(11958232)	C	AluSx	SINE/Alu	(6)	306	1	3543229
796	26.2	1.0	0.0	chr6	159943241	159943431	(10862548)	C	LTR16	LTR/ERVL	(1)	437	245	3544867
28	17.5	2.3	5.7	chr6	160991642	160991727	(9814252)	+	(CGC)n	Simple_repeat	1	88	(0)	3546054
1008	22.0	11.8	0.7	chr6	161007241	161007519	(9798460)	C	MER92D	LTR/ERV1	(4)	316	3	3546075
340	25.4	4.1	2.2	chr6	161659695	161659817	(9146162)	+	MIRb	SINE/MIR	33	156	(52)	3547017
202	26.4	9.4	1.1	chr6	161659965	161660052	(9145927)	+	MIRb	SINE/MIR	156	251	(17)	3547017
1353	20.1	1.8	2.5	chr6	161676419	161676703	(9129276)	+	MER58B	DNA/hAT-Charlie	59	341	(0)	3547040
243	35.5	2.1	0.0	chr6	161959179	161959271	(8846708)	+	ERV3-16A3_LTR	LTR/ERVL	10	104	(318)	3547486
12	8.9	4.2	0.0	chr6	162857113	162857136	(7948843)	+	(AGCA)n	Simple_repeat	1	25	(0)	3548749
17	8.1	3.9	0.0	chr6	163965944	163965969	(6840010)	+	(CA)n	Simple_repeat	1	27	(0)	3550162
12	13.9	0.0	0.0	chr6	165663204	165663227	(5142752)	+	(GGC)n	Simple_repeat	1	24	(0)	3552227
19	12.2	4.2	4.0	chr6	165663262	165663309	(5142670)	+	(CGC)n	Simple_repeat	1	50	(0)	3552228
2201	13.0	0.7	0.0	chr6	165882955	165883255	(4922724)	+	AluSz	SINE/Alu	2	304	(8)	3552500
144	9.9	1.8	0.9	chr6	165943136	165943361	(4862618)	+	(AAGA)n	Simple_repeat	1	230	(0)	3552580
2151	23.9	2.6	1.6	chr6	165943367	165943856	(4862123)	C	MLT2B2	LTR/ERVL	(20)	495	1	3552581
310	28.6	7.9	1.9	chr6	166289389	166289495	(4516484)	+	MIR	SINE/MIR	28	141	(121)	3553063
670	31.4	8.3	2.5	chr6	166289633	166289959	(4516020)	+	L2a	LINE/L2	3051	3398	(28)	3553064
213	32.0	2.3	4.6	chr6	168035740	168035870	(2770109)	+	MIRc	SINE/MIR	24	151	(117)	3555076
19	24.3	2.6	3.8	chr7	876805	876882	(158469091)	+	(CCCCG)n	Simple_repeat	1	80	(0)	3559024
244	29.7	7.6	4.8	chr7	1669460	1669625	(157676348)	+	MIR	SINE/MIR	22	192	(70)	3560286
19	6.5	0.0	5.6	chr7	1669857	1669892	(157676081)	+	(CCCA)n	Simple_repeat	1	36	(0)	3560287
1988	26.1	12.3	3.4	chr7	3032949	3033077	(156312896)	C	L2	LINE/L2	(1412)	2007	1869	3562521
1996	18.8	0.5	4.0	chr7	3033078	3033481	(156312492)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	3562523
559	33.7	7.7	3.8	chr7	4547572	4547997	(154797976)	+	L2c	LINE/L2	2926	3369	(18)	3565064
2446	8.6	0.0	0.0	chr7	4547999	4548299	(154797674)	C	AluSx1	SINE/Alu	(10)	302	2	3565073
2296	8.1	1.9	2.3	chr7	5189692	5190001	(154155972)	C	AluSx	SINE/Alu	(3)	309	1	3566483
15	16.5	3.2	7.7	chr7	5780939	5781001	(153564972)	+	(CAGCGCC)n	Simple_repeat	1	65	(0)	3567790
16	25.8	1.3	5.2	chr7	5781370	5781445	(153564528)	+	(CCCTCGG)n	Simple_repeat	1	77	(0)	3567791
255	33.3	0.8	4.1	chr7	6447537	6447658	(152898315)	+	MIR	SINE/MIR	109	226	(36)	3569390
181	33.1	12.4	3.0	chr7	6705941	6706108	(152639865)	+	MIR3	SINE/MIR	20	205	(3)	3569974
13	20.1	5.0	0.0	chr7	6706693	6706732	(152639241)	+	(CCG)n	Simple_repeat	1	42	(0)	3569975
18	19.9	2.2	0.0	chr7	6730018	6730063	(152615910)	+	(GGCGGA)n	Simple_repeat	1	47	(0)	3570020
13	24.3	5.7	0.0	chr7	7183194	7183246	(152162727)	+	(CCCGC)n	Simple_repeat	1	56	(0)	3570761
13	13.1	0.0	0.0	chr7	7567205	7567229	(151778744)	+	(GCCG)n	Simple_repeat	1	25	(0)	3571261
13	26.3	1.6	4.6	chr7	7968727	7968790	(151377183)	+	G-rich	Low_complexity	1	65	(0)	3571872
19	12.1	2.8	0.0	chr7	7968827	7968862	(151377111)	+	(GCG)n	Simple_repeat	1	37	(0)	3571873
309	30.2	10.4	6.4	chr7	7969024	7969225	(151376748)	C	L1M4b	LINE/L1	(6249)	618	408	3571874
1760	18.7	0.3	1.4	chr7	7999326	7999619	(151346354)	+	AluJr	SINE/Alu	1	291	(21)	3571925
1834	17.9	1.3	0.3	chr7	7999623	7999923	(151346050)	+	AluJo	SINE/Alu	1	304	(8)	3571926
13	4.1	0.0	9.7	chr7	8261747	8261777	(151084196)	+	(GGTG)n	Simple_repeat	1	31	(0)	3572278
12	16.0	0.0	3.3	chr7	8262052	8262081	(151083892)	+	(CCCGC)n	Simple_repeat	1	30	(0)	3572279
2731	30.0	6.0	4.5	chr7	8315143	8316753	(151029220)	C	L1PBa	LINE/L1	(5223)	1640	3	3572351
2055	14.7	2.2	0.3	chr7	10932688	10932993	(148412980)	+	AluJb	SINE/Alu	1	312	(0)	3575531
28	12.4	0.0	0.0	chr7	11831828	11831880	(147514093)	+	(AGC)n	Simple_repeat	1	53	(0)	3576680
20	27.5	0.0	0.0	chr7	11832113	11832184	(147513789)	+	(GCC)n	Simple_repeat	1	72	(0)	3576681
561	18.7	41.4	2.2	chr7	13351612	13351823	(145994150)	+	AluJb	SINE/Alu	1	295	(17)	3578642
6028	11.4	7.1	15.9	chr7	15396180	15397560	(143948413)	C	LTR12D	LTR/ERV1	(3)	1251	1	3581205
1264	32.4	6.2	1.9	chr7	16484529	16485041	(142860932)	+	LTR16E2	LTR/ERVL	15	550	(18)	3582520
339	27.9	8.4	1.2	chr7	17663130	17663247	(141682726)	C	L2b	LINE/L2	(1)	3386	3264	3584188
781	28.8	2.2	0.9	chr7	17663263	17663486	(141682487)	+	MIR	SINE/MIR	35	261	(1)	3584189
307	20.7	9.8	4.3	chr7	18991764	18991879	(140354094)	+	L1M5	LINE/L1	5392	5514	(680)	3586022
495	24.5	0.0	0.9	chr7	18991881	18991987	(140353986)	+	L2a	LINE/L2	3316	3421	(5)	3586023
1426	26.6	6.1	0.8	chr7	18991988	18992484	(140353489)	+	L1ME5	LINE/L1	5465	5989	(205)	3586024
12484	20.3	4.9	2.4	chr7	19020581	19023669	(140322304)	C	ERVL-B4-int	LTR/ERVL	(312)	5402	2007	3586047
17181	16.2	2.2	1.6	chr7	19981882	19984901	(139361072)	C	L1MA1	LINE/L1	(4511)	3054	15	3587124
10196	12.1	6.0	0.3	chr7	20208215	20209751	(139136222)	+	THE1D-int	LTR/ERVL-MaLR	3	1631	(0)	3587445
1557	22.2	7.3	7.6	chr7	23596916	23597039	(135748934)	C	L1ME3B	LINE/L1	(1911)	4235	4108	3592684
4119	6.9	0.2	0.0	chr7	23658804	23659323	(135686650)	+	LTR10G	LTR/ERV1	3	523	(0)	3592792
2401	22.2	6.3	3.4	chr7	24761625	24761940	(134584033)	C	MLT1H1	LTR/ERVL-MaLR	(215)	340	2	3594337
1856	14.9	1.7	0.3	chr7	24761977	24762264	(134583709)	+	AluJb	SINE/Alu	6	297	(15)	3594339
21	6.1	2.9	0.0	chr7	26535241	26535274	(132810699)	+	(AAAAC)n	Simple_repeat	1	35	(0)	3597203
13	25.6	1.5	5.9	chr7	27098315	27098381	(132247592)	+	(CTCTC)n	Simple_repeat	1	68	(0)	3598016
375	34.2	2.4	0.6	chr7	27319998	27320154	(132025819)	+	MIR	SINE/MIR	3	173	(95)	3598300
424	30.4	13.6	6.0	chr7	29371593	29372585	(129973388)	+	L2a	LINE/L2	2330	3408	(18)	3601499
11538	10.8	2.0	0.4	chr7	29576744	29578340	(129767633)	+	THE1D-int	LTR/ERVL-MaLR	3	1625	(6)	3601804
13	24.6	5.1	1.6	chr7	29685300	29685358	(129660615)	+	(GGCGCCC)n	Simple_repeat	1	62	(0)	3601964
13	24.3	4.9	5.8	chr7	29685532	29685613	(129660360)	+	(GCC)n	Simple_repeat	1	86	(0)	3601965
501	28.7	6.5	5.9	chr7	29805939	29806227	(129539746)	+	L2b	LINE/L2	3081	3371	(4)	3602147
12	12.7	8.5	3.9	chr7	30284482	30284528	(129061445)	+	(GGCGGA)n	Simple_repeat	1	51	(0)	3602921
12	32.3	2.4	3.6	chr7	30284934	30285015	(129060958)	+	(GGC)n	Simple_repeat	1	84	(0)	3602922
206	29.9	18.4	2.4	chr7	30504107	30504356	(128841617)	C	L2c	LINE/L2	(66)	3321	3023	3603220
523	29.8	10.1	3.3	chr7	30512162	30512373	(128833600)	C	MamRep605	LTR?	(126)	723	496	3603235
12	22.2	0.0	6.4	chr7	32728907	32728953	(126617020)	+	(GGC)n	Simple_repeat	1	47	(0)	3606677
847	16.9	0.0	0.0	chr7	33231179	33231302	(126114671)	C	FLAM_A	SINE/Alu	(18)	124	1	3607555
3423	17.5	2.9	7.0	chr7	33231303	33231635	(126114338)	C	L1MA9	LINE/L1	(1225)	4915	4593	3607553
330	30.7	13.6	8.5	chr7	33668953	33669062	(125676911)	C	L2c	LINE/L2	(284)	3103	3002	3608188
16	20.8	0.0	0.0	chr7	33905439	33905471	(125440502)	+	(C)n	Simple_repeat	1	33	(0)	3608572
15	30.3	1.5	1.5	chr7	33905472	33905499	(125440474)	+	(TCCC)n	Simple_repeat	6	67	(0)	3608573
20	30.8	3.2	1.0	chr7	35801370	35801462	(123544511)	+	(GGC)n	Simple_repeat	1	96	(0)	3611239
17	33.0	0.0	3.6	chr7	35801781	35801864	(123544109)	+	(GGC)n	Simple_repeat	1	84	(0)	3611240
520	26.3	2.3	4.9	chr7	36128311	36128501	(123217472)	+	MIRb	SINE/MIR	66	259	(9)	3611785
2017	11.8	1.4	2.8	chr7	36337934	36338292	(123007681)	+	MER4D1	LTR/ERV1	1	354	(427)	3612130
1794	17.2	2.0	0.3	chr7	36338302	36338592	(123007381)	C	AluJr	SINE/Alu	(16)	296	1	3612131
338	32.0	8.3	8.3	chr7	36661076	36661436	(122684537)	+	MLT1O	LTR/ERVL-MaLR	3	363	(179)	3612647
13	22.4	0.0	2.6	chr7	36661618	36661655	(122684318)	+	(CCT)n	Simple_repeat	1	38	(0)	3612648
253	31.6	7.7	7.7	chr7	38318856	38319140	(121026833)	+	L2c	LINE/L2	3054	3338	(49)	3614938
765	30.4	5.9	11.2	chr7	39539745	39540448	(119805525)	+	L2a	LINE/L2	2750	3417	(9)	3616668
14	27.0	4.3	2.7	chr7	39951108	39951177	(119394796)	+	(GGC)n	Simple_repeat	1	73	(0)	3617489
22	26.8	1.4	1.4	chr7	39951383	39951455	(119394518)	+	(AGC)n	Simple_repeat	1	74	(0)	3617490
284	32.6	11.6	1.1	chr7	42739943	42740119	(116605854)	+	MIR3	SINE/MIR	7	204	(4)	3621639
13360	9.9	1.9	1.5	chr7	43049149	43052296	(116293677)	+	L1MA3	LINE/L1	4516	7683	(41)	3622035
647	28.8	1.1	1.1	chr7	43058915	43059093	(116286880)	+	MIR	SINE/MIR	17	195	(67)	3622046
26486	2.2	0.2	0.0	chr7	43059097	43065116	(116280857)	+	L1PA2	LINE/L1	127	6154	(1)	3622047
631	18.9	10.7	0.6	chr7	43197753	43197912	(116148061)	C	MER45A	DNA/hAT-Tip100	(0)	178	1	3622265
224	27.2	3.4	1.7	chr7	43198011	43198815	(116147158)	+	(AC)n	Simple_repeat	1	832	(0)	3622266
1720	13.2	4.7	5.6	chr7	43927300	43927603	(115418370)	C	AluJo	SINE/Alu	(11)	301	1	3623465
31	18.7	4.1	3.9	chr7	44847977	44848074	(114497899)	+	(CGC)n	Simple_repeat	1	102	(0)	3625016
553	21.7	0.0	0.0	chr7	45442093	45442198	(113903775)	+	MER45A	DNA/hAT-Tip100	69	174	(4)	3625948
459	8.7	1.4	0.0	chr7	45442219	45442287	(113903686)	C	LTR54	LTR/ERV1	(0)	510	441	3625949
842	23.4	2.0	0.5	chr7	45442291	45442482	(113903491)	+	AluJo	SINE/Alu	102	296	(16)	3625950
24	12.7	0.0	0.0	chr7	45442484	45442526	(113903447)	+	(TATCTA)n	Simple_repeat	1	43	(0)	3625951
1443	13.2	15.2	0.0	chr7	45442527	45442827	(113903146)	C	LTR54B	LTR/ERV1	(133)	377	1	3625952
2303	11.9	0.3	0.0	chr7	47892949	47893259	(111452714)	+	AluSz	SINE/Alu	1	312	(0)	3629212
400	32.8	10.6	8.8	chr7	47893260	47893290	(111452683)	C	L2a	LINE/L2	(861)	2558	2529	3629210
2726	19.9	0.9	4.0	chr7	48380687	48381262	(110964711)	+	MER74A	LTR/ERVL	1	558	(0)	3629842
34	9.3	0.0	0.0	chr7	48381356	48381402	(110964571)	+	(CA)n	Simple_repeat	1	47	(0)	3629843
205	34.1	4.5	1.2	chr7	48425077	48425162	(110920811)	+	L2c	LINE/L2	3262	3350	(37)	3629899
2059	12.6	1.3	2.8	chr7	50999389	50999705	(108346268)	+	AluJb	SINE/Alu	1	312	(0)	3633075
1922	21.9	2.1	2.3	chr7	50999706	50999982	(108345991)	+	L1ME1	LINE/L1	5598	5882	(297)	3633074
29	18.0	1.3	4.0	chr7	51316409	51316483	(108029490)	+	(CAC)n	Simple_repeat	1	76	(0)	3633470
363	29.1	2.7	1.4	chr7	51852671	51852812	(107493161)	+	MIR3	SINE/MIR	54	195	(13)	3634180
832	29.4	11.0	2.7	chr7	52799728	52800311	(106545662)	+	Zaphod	DNA/hAT-Tip100	205	842	(3189)	3635386
11308	11.6	2.5	2.7	chr7	54521001	54523468	(104822505)	C	L1PB1	LINE/L1	(0)	6617	4159	3637435
6553	15.9	3.0	2.5	chr7	55813636	55816502	(103529471)	+	L1MA3	LINE/L1	5693	7724	(0)	3639263
756	24.9	11.4	8.2	chr7	56064542	56064591	(103281382)	C	L1MC5	LINE/L1	(4)	9300	9250	3639841
2386	6.6	1.3	4.1	chr7	56064592	56064910	(103281063)	+	AluSx1	SINE/Alu	1	310	(2)	3639842
220	28.4	2.9	1.5	chr7	56106796	56106863	(103239110)	+	MIR1_Amn	SINE/MIR	63	131	(99)	3639946
706	32.9	0.7	0.7	chr7	58104150	58104446	(101241527)	C	L1M5	LINE/L1	(3501)	2645	2349	3643240
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
1959	15.6	0.0	0.3	chr7	64546460	64546742	(94799231)	+	AluSx	SINE/Alu	1	282	(30)	3646412
2178	14.7	0.6	0.8	chr7	64562251	64562607	(94783366)	+	MER57E3	LTR/ERV1	132	487	(0)	3646433
2965	13.3	1.4	0.4	chr7	64666677	64667158	(94678815)	C	MER57E3	LTR/ERV1	(0)	487	1	3646565
42	20.0	0.0	0.0	chr7	64737704	64737784	(94608189)	+	(T)n	Simple_repeat	1	81	(0)	3646662
7556	5.8	0.4	24.6	chr7	64737785	64739575	(94606398)	C	SVA_D	Retroposon/SVA	(0)	1386	32	3646663
3042	13.2	2.7	0.2	chr7	64794917	64795388	(94550585)	C	MER57E3	LTR/ERV1	(3)	484	1	3646757
278	24.5	5.3	3.6	chr7	64882759	64882923	(94463050)	+	SST1	Satellite/centr	1385	1552	(11)	3646875
30	20.7	0.0	0.0	chr7	64882955	64883015	(94462958)	+	(GT)n	Simple_repeat	1	61	(0)	3646876
3137	12.8	1.9	2.5	chr7	64903742	64904086	(94441887)	C	MER57E3	LTR/ERV1	(0)	487	144	3646912
3193	13.4	0.2	0.0	chr7	65005696	65006181	(94339792)	+	MER57E3	LTR/ERV1	1	487	(0)	3647046
1501	16.3	2.2	3.0	chr7	66626741	66627010	(92718963)	C	AluJb	SINE/Alu	(10)	302	35	3650445
2325	12.4	7.0	3.2	chr7	66627011	66627319	(92718654)	C	L1MA4A	LINE/L1	(166)	6137	5812	3650444
581	18.9	1.6	13.9	chr7	66627320	66627374	(92718599)	+	MER5A	DNA/hAT-Charlie	131	183	(6)	3650443
2429	8.3	0.7	0.0	chr7	67461921	67462222	(91883751)	+	AluSx1	SINE/Alu	9	312	(0)	3652291
246	32.0	23.6	0.0	chr7	67462419	67462590	(91883383)	+	L2c	LINE/L2	3156	3380	(7)	3652292
2087	11.7	0.3	5.2	chr7	69412106	69412430	(89933543)	+	AluJr	SINE/Alu	2	310	(2)	3656615
722	23.7	5.8	7.0	chr7	69412431	69412538	(89933435)	C	MIR	SINE/MIR	(164)	98	1	3656614
1068	22.3	22.2	3.2	chr7	69412576	69413048	(89932925)	C	MLT1G	LTR/ERVL-MaLR	(0)	591	3	3656616
1794	14.7	9.1	2.1	chr7	69540227	69540740	(89805233)	C	MER51A	LTR/ERV1	(13)	627	1	3656927
1839	15.9	2.0	4.5	chr7	69540849	69541203	(89804770)	+	MLT1A	LTR/ERVL-MaLR	1	346	(28)	3656928
26	0.0	8.3	0.0	chr7	70989465	70989500	(88356473)	+	(AAAAT)n	Simple_repeat	1	39	(0)	3659249
2017	15.3	5.7	4.4	chr7	70989501	70989675	(88356298)	+	MSTB1	LTR/ERVL-MaLR	201	366	(66)	3659247
784	22.3	0.0	1.3	chr7	70989676	70989832	(88356141)	C	AluJo	SINE/Alu	(11)	301	147	3659250
3832	10.0	4.4	2.3	chr7	70989833	70990387	(88355586)	+	LTR71B	LTR/ERV1	1	567	(43)	3659251
2082	12.3	0.0	1.9	chr7	73432874	73433191	(85912782)	+	AluJr	SINE/Alu	1	312	(0)	3664622
2532	5.5	0.0	0.3	chr7	73433200	73433506	(85912467)	+	AluSq2	SINE/Alu	2	307	(6)	3664623
13	17.4	5.3	5.0	chr7	73557829	73557885	(85788088)	+	(CGAGGTG)n	Simple_repeat	1	60	(0)	3664905
876	14.0	0.0	3.5	chr7	73558186	73558328	(85787645)	+	FAM	SINE/Alu	24	161	(24)	3664906
12	20.2	0.0	6.7	chr7	73738869	73738913	(85607060)	+	(CCGCC)n	Simple_repeat	1	45	(0)	3665345
298	34.9	0.0	12.3	chr7	73761741	73761837	(85584136)	C	MIR3	SINE/MIR	(86)	122	35	3665406
2439	6.4	0.0	1.7	chr7	74548138	74548435	(84797538)	+	AluY	SINE/Alu	3	295	(16)	3667364
14	3.5	6.1	5.7	chr7	76303882	76303914	(83042059)	+	(GGTGG)n	Simple_repeat	1	35	(0)	3671829
1797	13.8	1.3	8.9	chr7	76379384	76379710	(82966263)	C	AluJo	SINE/Alu	(10)	302	1	3672004
1626	21.4	7.8	4.3	chr7	77858856	77859300	(81486673)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	6	3674607
1781	19.1	0.0	3.5	chr7	77859554	77859872	(81486101)	C	AluJb	SINE/Alu	(2)	310	3	3674608
10119	10.8	3.0	0.7	chr7	77987878	77991087	(81354886)	C	L1PBa1	LINE/L1	(3320)	3542	252	3674829
35	0.0	2.8	0.0	chr7	80919560	80919595	(78426378)	+	(TTTTGTT)n	Simple_repeat	1	37	(0)	3678794
1867	8.7	9.1	1.9	chr7	80919597	80919860	(78426113)	C	AluSc	SINE/Alu	(24)	285	1	3678795
22	13.8	0.0	0.0	chr7	82443816	82443855	(76902118)	+	(GCGGAG)n	Simple_repeat	1	40	(0)	3680896
246	31.3	1.2	1.2	chr7	82845930	82846013	(76499960)	+	L2a	LINE/L2	3334	3417	(9)	3681477
1552	28.1	6.3	6.4	chr7	82961501	82962204	(76383769)	+	Charlie7	DNA/hAT-Charlie	1	703	(1909)	3681608
15347	15.8	4.2	0.6	chr7	86510475	86514257	(72831716)	C	L1MA6	LINE/L1	(0)	7362	3430	3686050
13	15.4	2.5	4.9	chr7	87152981	87153020	(72192953)	+	(TTTTTAG)n	Simple_repeat	1	41	(0)	3686860
453	22.8	5.3	7.4	chr7	87457001	87457137	(71888836)	+	MER5B	DNA/hAT-Charlie	3	140	(38)	3687221
20	22.9	1.8	0.0	chr7	87875963	87876018	(71469955)	+	(GGCTCC)n	Simple_repeat	1	57	(0)	3687770
19	28.2	1.6	7.2	chr7	87876335	87876457	(71469516)	+	G-rich	Low_complexity	1	125	(0)	3687771
18	0.0	0.0	0.0	chr7	87934661	87934680	(71411293)	+	(T)n	Simple_repeat	1	20	(0)	3687846
33	0.0	0.0	0.0	chr7	87966722	87966752	(71379221)	+	(T)n	Simple_repeat	1	31	(0)	3687884
13	20.9	3.8	3.6	chr7	88220048	88220100	(71125873)	+	(GCCCT)n	Simple_repeat	1	55	(0)	3688231
2743	4.0	0.0	0.0	chr7	90497283	90497585	(68848388)	+	AluY	SINE/Alu	1	303	(8)	3691179
1649	14.7	8.7	3.4	chr7	90497586	90497744	(68848229)	+	AluJr	SINE/Alu	128	310	(2)	3691178
5676	16.0	4.1	7.7	chr7	90497745	90498032	(68847941)	C	L1M2	LINE/L1	(3460)	2683	2415	3691177
18	22.7	0.0	0.0	chr7	91264494	91264539	(68081434)	+	(GGAGGC)n	Simple_repeat	1	46	(0)	3692227
12	5.5	0.0	0.0	chr7	91264708	91264726	(68081247)	+	(GCG)n	Simple_repeat	1	19	(0)	3692228
18	16.2	2.3	2.3	chr7	91265042	91265084	(68080889)	+	(GCT)n	Simple_repeat	1	44	(0)	3692229
14049	16.2	2.8	5.0	chr7	91966188	91967964	(67378009)	C	L1MA4	LINE/L1	(6)	6606	4902	3693154
27120	3.6	0.6	0.2	chr7	92183757	92189878	(67156095)	C	L1PA3	LINE/L1	(3)	6152	8	3693498
26	19.1	0.0	0.0	chr7	92695272	92695319	(66650654)	+	A-rich	Low_complexity	1	48	(0)	3694299
18	16.9	2.0	3.9	chr7	92833535	92833584	(66512389)	+	(GCC)n	Simple_repeat	1	51	(0)	3694479
256	31.1	11.3	8.6	chr7	93098299	93098460	(66247513)	+	LTR78	LTR/ERV1	1	172	(1132)	3694828
1239	21.0	0.0	0.0	chr7	93098461	93098684	(66247289)	C	MER58A	DNA/hAT-Charlie	(0)	224	1	3694829
277	26.5	6.5	5.8	chr7	93098685	93098817	(66247156)	+	LTR78	LTR/ERV1	173	342	(962)	3694828
1749	15.6	0.7	7.2	chr7	95435466	95435785	(63910188)	C	AluJo	SINE/Alu	(13)	299	1	3697950
286	33.8	3.4	8.4	chr7	97188266	97188420	(62157553)	+	L1ME3B	LINE/L1	433	579	(6697)	3700412
29	0.0	0.0	0.0	chr7	97982966	97982990	(61362983)	+	(TC)n	Simple_repeat	1	25	(0)	3701593
16	0.0	0.0	0.0	chr7	97982991	97983005	(61362968)	+	(T)n	Simple_repeat	1	15	(0)	3701594
1854	11.6	2.3	0.0	chr7	97983077	97983335	(61362638)	+	AluSx1	SINE/Alu	37	301	(11)	3701595
6524	15.1	1.3	3.5	chr7	98218356	98219619	(61126354)	+	L1PB	LINE/L1	4125	5363	(783)	3702113
13	21.7	0.0	2.6	chr7	98878848	98878886	(60467087)	+	(GCGCTCG)n	Simple_repeat	1	39	(0)	3703633
1816	18.5	0.7	0.3	chr7	99539821	99540122	(59805851)	C	AluJr4	SINE/Alu	(8)	304	2	3704979
2588	6.3	0.0	0.0	chr7	99540136	99540436	(59805537)	C	AluY	SINE/Alu	(10)	301	1	3704980
1509	16.9	4.2	10.0	chr7	100465486	100465816	(58880157)	+	AluJb	SINE/Alu	2	312	(0)	3706658
1822	13.4	0.4	1.1	chr7	101218299	101218575	(58127398)	C	AluJr	SINE/Alu	(37)	275	1	3708259
323	34.2	13.2	5.7	chr7	101218640	101219024	(58126949)	C	L2c	LINE/L2	(20)	3367	2950	3708260
2404	6.6	0.0	0.0	chr7	101821333	101821637	(57524336)	C	AluYk3	SINE/Alu	(6)	305	1	3709746
36	9.8	0.0	0.0	chr7	101821642	101821697	(57524276)	+	(T)n	Simple_repeat	1	56	(0)	3709747
1028	8.2	0.0	0.0	chr7	101821706	101821840	(57524133)	C	AluYh3	SINE/Alu	(43)	268	134	3709748
30	3.1	0.0	0.0	chr7	101821841	101821873	(57524100)	+	(GTTTTTTT)n	Simple_repeat	1	33	(0)	3709749
2244	5.0	0.0	0.0	chr7	101821874	101822153	(57523820)	C	AluY	SINE/Alu	(31)	280	1	3709750
1927	20.3	9.0	6.1	chr7	103076018	103076554	(56269419)	C	MER67C	LTR/ERV1	(0)	711	148	3712169
400	28.7	15.0	0.7	chr7	103641518	103641704	(55704269)	+	MIRb	SINE/MIR	13	233	(35)	3713003
12	23.8	1.8	5.4	chr7	105387935	105387989	(53957984)	+	(CCCGCG)n	Simple_repeat	1	56	(0)	3715693
1121	17.6	5.5	4.2	chr7	105602397	105602480	(53743493)	C	AluJb	SINE/Alu	(9)	303	217	3716221
1416	24.1	12.5	8.6	chr7	105602481	105603010	(53742963)	+	MER50	LTR/ERV1	1	564	(170)	3716222
31	0.0	0.0	0.0	chr7	106101439	106101467	(53244506)	+	(C)n	Simple_repeat	1	29	(0)	3717099
35	25.8	2.4	5.8	chr7	106112281	106112449	(53233524)	+	G-rich	Low_complexity	1	173	(0)	3717117
1025	29.5	8.2	7.0	chr7	106744584	106745187	(52600786)	+	LTR67B	LTR/ERVL	9	620	(0)	3717997
1659	16.7	0.4	2.5	chr7	107002458	107002732	(52343241)	+	AluJr4	SINE/Alu	43	311	(1)	3718426
368	29.9	14.4	8.3	chr7	107580185	107580571	(51765402)	C	L1M4b	LINE/L1	(6263)	604	190	3719278
26	10.3	7.6	2.8	chr7	108526347	108526412	(50819561)	+	(CGTG)n	Simple_repeat	1	71	(0)	3720664
30	0.0	0.0	0.0	chr7	112205773	112205798	(47140175)	+	(AC)n	Simple_repeat	1	26	(0)	3725450
1466	26.9	4.0	3.8	chr7	112392127	112392359	(46953614)	+	L2a	LINE/L2	3000	3236	(190)	3725724
1883	15.4	2.0	2.0	chr7	112392360	112392651	(46953322)	C	AluJb	SINE/Alu	(19)	293	2	3725725
1466	26.9	4.0	3.8	chr7	112392652	112392786	(46953187)	+	L2a	LINE/L2	3237	3369	(57)	3725724
2751	4.0	0.0	1.0	chr7	112392787	112393088	(46952885)	+	AluY	SINE/Alu	1	299	(12)	3725726
571	32.1	15.3	1.6	chr7	112788712	112789412	(46556561)	+	L2b	LINE/L2	2551	3374	(1)	3726296
53	7.5	0.0	0.0	chr7	113086375	113086444	(46259529)	+	(T)n	Simple_repeat	1	70	(0)	3726684
24	14.0	2.1	0.0	chr7	113086566	113086612	(46259361)	+	(GGC)n	Simple_repeat	1	48	(0)	3726685
3491	15.6	4.4	2.6	chr7	114098287	114098855	(45247118)	+	L1M3	LINE/L1	4693	5268	(872)	3727940
20962	10.9	1.4	0.5	chr7	114876210	114881006	(44464967)	C	L1MA2	LINE/L1	(0)	7723	2859	3728971
18	7.8	0.0	0.0	chr7	114922577	114922603	(44423370)	+	(GGA)n	Simple_repeat	1	27	(0)	3729032
16	18.4	3.8	3.6	chr7	114922984	114923049	(44422924)	+	(GCGGC)n	Simple_repeat	1	66	(0)	3729033
16	14.1	5.1	0.0	chr7	116862909	116862955	(42483018)	+	G-rich	Low_complexity	1	49	(0)	3731666
22	8.4	0.0	4.8	chr7	120857358	120857401	(38488572)	+	(GGGGCG)n	Simple_repeat	1	41	(0)	3736915
14	12.5	0.0	0.0	chr7	120857964	120857989	(38487984)	+	(CCG)n	Simple_repeat	1	26	(0)	3736916
18	4.8	0.0	0.0	chr7	120857994	120858015	(38487958)	+	(A)n	Simple_repeat	1	22	(0)	3736917
302	23.7	8.7	12.0	chr7	121395853	121396068	(37949905)	+	L1M4b	LINE/L1	472	679	(6188)	3737604
16	30.9	1.4	1.4	chr7	121396138	121396206	(37949767)	+	(CCGC)n	Simple_repeat	1	70	(0)	3737605
727	33.5	3.2	1.2	chr7	121530297	121530695	(37815278)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	5	3737829
11523	13.4	2.4	1.4	chr7	122107955	122109987	(37235986)	+	L1M2	LINE/L1	3974	6026	(819)	3738637
13	8.5	0.0	3.7	chr7	122144145	122144171	(37201802)	+	(CCTCT)n	Simple_repeat	1	27	(0)	3738703
1580	28.6	10.6	3.7	chr7	123355039	123355634	(35990339)	C	HAL1	LINE/L1	(1057)	1450	795	3740303
239	23.7	2.6	7.3	chr7	123355698	123355779	(35990194)	+	LTR33	LTR/ERVL	3	80	(435)	3740306
341	29.6	8.7	4.5	chr7	123355972	123356148	(35989825)	+	LTR33	LTR/ERVL	317	501	(14)	3740306
10960	12.6	1.5	0.2	chr7	123382604	123384211	(35961762)	+	THE1C-int	LTR/ERVL-MaLR	3	1631	(0)	3740349
12	25.9	0.0	2.3	chr7	123748458	123748500	(35597473)	+	G-rich	Low_complexity	1	43	(0)	3740905
36	2.7	0.0	0.0	chr7	124032403	124032440	(35313533)	+	(GCT)n	Simple_repeat	1	38	(0)	3741320
14	15.9	0.0	0.0	chr7	124765942	124765969	(34580004)	+	(CCT)n	Simple_repeat	1	28	(0)	3742264
2872	2.2	0.0	0.3	chr7	125342404	125342715	(34003258)	+	AluYk4	SINE/Alu	1	311	(0)	3743025
240	28.3	3.9	2.9	chr7	125343067	125343168	(34002805)	C	L1MEg	LINE/L1	(5329)	755	653	3743026
558	11.6	12.8	15.7	chr7	125343172	125343324	(34002649)	+	MER53	DNA/hAT	25	172	(21)	3743027
2603	5.3	0.0	0.7	chr7	125343330	125343632	(34002341)	C	AluY	SINE/Alu	(10)	301	1	3743028
4663	13.1	2.4	2.6	chr7	125563549	125564348	(33781625)	+	LTR1A1	LTR/ERV1	1	798	(1)	3743293
606	32.3	6.7	6.6	chr7	125564349	125564375	(33781598)	+	L1M7	LINE/L1	1766	1786	(4432)	3743289
2727	4.5	0.0	0.0	chr7	127519660	127519969	(31826004)	+	AluYk3	SINE/Alu	2	311	(0)	3745858
6449	7.9	3.2	2.4	chr7	127519970	127520500	(31825473)	+	L1PA7	LINE/L1	4662	5187	(959)	3745857
1919	13.0	5.1	1.0	chr7	128002941	128003239	(31342734)	+	AluSz6	SINE/Alu	1	312	(0)	3746497
587	27.3	8.8	1.7	chr7	128454161	128454339	(30891634)	C	MIR	SINE/MIR	(1)	261	69	3747270
31	29.5	2.4	1.5	chr7	129224897	129225023	(30120950)	+	G-rich	Low_complexity	1	130	(0)	3748759
19	32.7	0.0	1.2	chr7	129225229	129225309	(30120664)	+	(GGCCCC)n	Simple_repeat	1	81	(0)	3748760
2550	24.4	6.1	2.9	chr7	129438570	129439284	(29906689)	C	MER21C	LTR/ERVL	(78)	860	122	3749152
302	14.3	11.3	0.0	chr7	129439297	129439359	(29906614)	C	MIR	SINE/MIR	(139)	123	53	3749151
26549	2.2	0.1	0.2	chr7	130577798	130583509	(28762464)	+	L1PA2	LINE/L1	448	6155	(0)	3751319
2288	13.2	0.0	0.0	chr7	131411626	131411936	(27934037)	+	AluSx	SINE/Alu	2	312	(0)	3752753
1789	17.6	1.0	1.7	chr7	131411937	131412097	(27933876)	+	AluJb	SINE/Alu	133	293	(19)	3752752
2058	21.3	4.3	5.1	chr7	132457553	132458061	(26887912)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	3754427
1953	15.9	0.0	2.9	chr7	133678606	133678919	(25667054)	C	AluJo	SINE/Alu	(7)	305	1	3756300
14184	16.6	4.5	1.1	chr7	135023194	135026244	(24319729)	+	L1P4a	LINE/L1	3	3164	(3319)	3758390
274	27.4	9.3	2.5	chr7	135170070	135170189	(24175784)	C	MIRb	SINE/MIR	(110)	158	30	3758537
1188	16.9	16.9	3.8	chr7	135664349	135664609	(23681364)	C	AluJr	SINE/Alu	(10)	302	1	3759377
1341	29.5	11.6	3.8	chr7	138338052	138338408	(21007565)	C	HAL1	LINE/L1	(712)	1795	1415	3763395
577	25.7	2.6	2.6	chr7	138338628	138338783	(21007190)	C	MLT1H1	LTR/ERVL-MaLR	(0)	591	436	3763397
16	20.5	0.0	0.0	chr7	138460183	138460221	(20885752)	+	G-rich	Low_complexity	1	39	(0)	3763674
14	16.1	0.0	0.0	chr7	138460459	138460486	(20885487)	+	GA-rich	Low_complexity	1	28	(0)	3763675
12	19.6	7.0	5.3	chr7	138460756	138460826	(20885147)	+	(CTGC)n	Simple_repeat	1	76	(0)	3763676
15	4.3	4.2	0.0	chr7	138461132	138461155	(20884818)	+	(CCG)n	Simple_repeat	1	25	(0)	3763677
991	21.5	7.5	18.5	chr7	138665812	138666314	(20679659)	+	MER65A	LTR/ERV1	3	445	(0)	3764038
15	19.5	0.0	0.0	chr7	138786034	138786073	(20559900)	+	(CTCTC)n	Simple_repeat	1	40	(0)	3764322
3263	18.7	5.0	0.3	chr7	139560066	139560713	(19785260)	+	L1MB4	LINE/L1	5495	6174	(6)	3765849
1834	13.9	0.4	1.1	chr7	140291464	140291743	(19054230)	C	AluJo	SINE/Alu	(30)	282	5	3767096
3019	23.1	5.9	10.7	chr7	140291744	140291947	(19054026)	C	ERVL-E-int	LTR/ERVL	(603)	5064	4859	3767092
28	0.0	0.0	0.0	chr7	140291948	140291974	(19053999)	+	(T)n	Simple_repeat	1	27	(0)	3767097
2021	11.5	0.0	1.4	chr7	140291980	140292257	(19053716)	C	AluSx1	SINE/Alu	(38)	274	1	3767098
258	29.7	7.1	6.0	chr7	140298298	140298562	(19047411)	C	L1ME3D	LINE/L1	(6)	6236	5969	3767113
54	16.6	0.0	0.0	chr7	140298563	140298654	(19047319)	+	(AT)n	Simple_repeat	1	92	(0)	3767114
23	15.1	0.0	2.2	chr7	140479183	140479228	(18866745)	+	(GCC)n	Simple_repeat	1	46	(0)	3767540
13	21.8	0.0	0.0	chr7	140479268	140479300	(18866673)	+	(GCTGCC)n	Simple_repeat	1	33	(0)	3767541
4192	12.0	6.9	1.2	chr7	140672105	140672755	(18673218)	C	LTR8	LTR/ERV1	(0)	691	1	3767990
19	24.8	2.1	6.1	chr7	140924604	140924699	(18421274)	+	(CGGCGC)n	Simple_repeat	1	98	(0)	3768435
371	28.8	12.0	2.9	chr7	144835294	144835497	(14510476)	C	MIRb	SINE/MIR	(23)	245	21	3773750
2537	6.4	0.0	0.3	chr7	144836403	144836699	(14509274)	+	AluSx3	SINE/Alu	1	296	(15)	3773751
4322	9.0	3.0	7.0	chr7	144849095	144849753	(14496220)	C	L1PA16	LINE/L1	(1164)	4982	4357	3773779
92	32.6	0.8	1.1	chr7	145168926	145169280	(14176693)	+	(CACACA)n	Simple_repeat	1	358	(0)	3774272
890	29.9	7.3	3.9	chr7	145169287	145169721	(14176252)	C	LTR86A2	LTR/ERVL	(45)	463	13	3774273
21204	11.3	1.7	2.1	chr7	146913759	146917575	(12428398)	C	L1PA17	LINE/L1	(2)	6880	3102	3776558
2643	12.3	20.7	0.5	chr7	147632650	147633431	(11712542)	+	THE1C-int	LTR/ERVL-MaLR	1	1048	(583)	3777568
18	24.7	1.5	4.3	chr7	148699038	148699105	(10646868)	+	(CGG)n	Simple_repeat	1	69	(0)	3779245
1964	13.5	0.7	1.7	chr7	149159730	149160025	(10185948)	C	AluSz	SINE/Alu	(19)	293	1	3780189
590	14.9	0.0	7.6	chr7	149160026	149160156	(10185817)	C	L1MA5	LINE/L1	(47)	6253	6133	3780190
621	4.2	0.0	0.0	chr7	149355675	149355746	(9990227)	C	tRNA-Cys-TGY	tRNA	(3)	72	1	3780554
281	24.1	3.7	0.0	chr7	149356236	149356314	(9989659)	+	MLT1C	LTR/ERVL-MaLR	386	467	(0)	3780555
408	15.7	4.1	0.0	chr7	149356326	149356395	(9989578)	+	LTR50	LTR/ERVL	723	795	(0)	3780556
3357	19.9	0.9	1.7	chr7	150535171	150535926	(8810047)	C	L1M3	LINE/L1	(2157)	3983	3234	3782183
2211	8.8	3.6	0.0	chr7	151314821	151315114	(8030859)	+	AluSz	SINE/Alu	1	305	(7)	3783231
1245	25.4	14.2	2.4	chr7	151315291	151315915	(8030058)	C	Charlie2b	DNA/hAT-Charlie	(41)	2741	2031	3783232
17	0.0	0.0	0.0	chr7	151736384	151736402	(7609571)	+	(T)n	Simple_repeat	1	19	(0)	3783968
247	23.5	8.1	2.9	chr7	151736812	151736881	(7609092)	C	Plat_L3	LINE/CR1	(3)	3583	3510	3783969
1234	23.3	5.9	6.5	chr7	151968705	151969392	(7376581)	C	L1M3	LINE/L1	(595)	5584	4932	3784340
2426	20.3	3.9	7.0	chr7	151969393	151969798	(7376175)	C	LTR71B	LTR/ERV1	(0)	610	199	3784341
2482	6.8	0.0	1.3	chr7	151969799	151970109	(7375864)	C	AluY	SINE/Alu	(4)	307	1	3784342
16	22.0	5.4	3.9	chr7	152025618	152025691	(7320282)	+	(CGCGG)n	Simple_repeat	1	78	(0)	3784462
23	12.4	3.5	5.0	chr7	152025935	152025992	(7319981)	+	(GCG)n	Simple_repeat	1	60	(0)	3784463
2080	15.6	4.2	2.4	chr7	152026289	152026961	(7319012)	+	MER4A	LTR/ERV1	1	740	(26)	3784464
1988	16.4	0.3	0.3	chr7	152488066	152488377	(6857596)	+	AluJr	SINE/Alu	1	312	(0)	3785253
824	14.5	0.7	0.0	chr7	152488379	152488527	(6857446)	+	FLAM_C	SINE/Alu	11	220	(82)	3785254
1298	25.3	14.9	5.8	chr7	152664717	152665306	(6680667)	+	MER50C	LTR/ERV1	1	734	(48)	3785690
484	15.7	0.3	10.4	chr7	152665286	152665406	(6680567)	+	MLT2B2	LTR/ERVL	455	562	(0)	3785689
1793	19.5	15.2	3.1	chr7	152665407	152665487	(6680486)	+	Charlie1a	DNA/hAT-Charlie	792	884	(571)	3785691
1890	12.2	4.9	1.7	chr7	152665488	152665781	(6680192)	C	AluJb	SINE/Alu	(8)	304	1	3785692
7120	10.3	2.9	0.2	chr7	155029126	155031056	(4314917)	C	L1MA3	LINE/L1	(2)	6303	4317	3789062
16	26.6	1.7	1.6	chr7	155297434	155297493	(4048480)	+	G-rich	Low_complexity	1	61	(0)	3789476
1524	28.7	10.1	5.8	chr7	155635583	155636584	(3709389)	C	L1MD3	LINE/L1	(264)	2315	1221	3789911
1634	24.4	4.4	2.5	chr7	155847598	155848068	(3497905)	C	L1MB3	LINE/L1	(12)	6171	5692	3790162
2409	22.3	8.2	2.0	chr7	155912186	155912790	(3433183)	+	Tigger17a	DNA/TcMar-Tigger	3	648	(6)	3790240
894	29.3	7.5	0.0	chr7	156088966	156089272	(3256701)	+	Arthur1	DNA/hAT-Tip100	70	401	(3546)	3790471
460	28.3	8.6	2.1	chr7	156089267	156089504	(3256469)	+	Arthur1B	DNA/hAT-Tip100	440	694	(531)	3790472
573	32.7	5.3	0.0	chr7	156089627	156089877	(3256096)	+	Arthur1	DNA/hAT-Tip100	843	1107	(2840)	3790473
2068	14.7	0.3	0.6	chr7	156848650	156848962	(2497011)	+	AluSx1	SINE/Alu	1	312	(0)	3791437
4881	11.1	4.3	3.1	chr7	156848963	156849501	(2496472)	+	L1PA15	LINE/L1	5611	6157	(8)	3791436
14	32.0	0.0	0.0	chr7	156892384	156892437	(2453536)	+	(CGGCC)n	Simple_repeat	1	54	(0)	3791498
48	29.4	2.7	4.5	chr7	156892630	156892889	(2453084)	+	G-rich	Low_complexity	1	267	(0)	3791499
21	21.2	0.0	4.6	chr7	156893190	156893254	(2452719)	+	G-rich	Low_complexity	1	65	(0)	3791500
1120	26.1	8.7	1.6	chr7	157581712	157582136	(1763837)	+	MLT1C	LTR/ERVL-MaLR	1	458	(9)	3792596
16	0.0	3.9	3.7	chr7	158151565	158151590	(1194383)	+	(GTG)n	Simple_repeat	1	27	(0)	3793030
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
1229	20.7	5.7	2.8	chr7	158977136	158977349	(368624)	+	L1MC1	LINE/L1	6102	6324	(9)	3793977
1555	23.3	4.6	1.2	chr8	358724	359205	(144779431)	C	HAL1M8	LINE/L1	(1148)	1843	1345	3794744
2345	24.9	4.8	2.2	chr8	359284	360024	(144778612)	C	HAL1M8	LINE/L1	(1615)	1376	614	3794744
231	31.2	16.0	0.0	chr8	1831717	1831873	(143306763)	+	MER91B	DNA/hAT-Tip100	4	190	(0)	3796157
12	23.5	2.5	0.0	chr8	1832003	1832042	(143306594)	+	G-rich	Low_complexity	1	41	(0)	3796158
12	17.4	8.9	0.0	chr8	6708877	6708921	(138429715)	+	(CCGGCGTC)n	Simple_repeat	1	49	(0)	3802489
190	27.9	13.5	2.4	chr8	9003882	9004006	(136134630)	+	L2	LINE/L2	2721	2861	(558)	3805753
21	0.0	0.0	0.0	chr8	10335251	10335273	(134803363)	+	(T)n	Simple_repeat	1	23	(0)	3807903
507	34.9	5.0	1.7	chr8	11979857	11980145	(133158491)	C	L2	LINE/L2	(567)	2852	2554	3810497
335	32.8	7.8	3.2	chr8	11980185	11980430	(133158206)	C	L2	LINE/L2	(2873)	546	289	3810497
12	16.3	2.8	2.7	chr8	19013517	19013552	(126125084)	+	(GCGCCC)n	Simple_repeat	1	37	(0)	3820499
31	25.6	0.0	8.8	chr8	19013798	19013956	(126124680)	+	G-rich	Low_complexity	1	159	(0)	3820500
309	29.2	4.0	1.0	chr8	23458038	23458134	(121680502)	C	MIRb	SINE/MIR	(105)	163	64	3827941
303	13.1	0.0	0.0	chr8	25184222	25184278	(119954358)	C	L2a	LINE/L2	(2)	3424	3329	3830661
281	31.5	2.6	2.0	chr8	27591811	27591962	(117546674)	C	Charlie16a	DNA/hAT-Charlie	(127)	215	63	3834629
23	5.3	2.3	4.5	chr8	28412493	28412535	(116726101)	+	(TTTCTT)n	Simple_repeat	1	44	(0)	3836084
2028	13.6	1.3	2.5	chr8	28412536	28412851	(116725785)	C	AluJo	SINE/Alu	(0)	312	1	3836085
11	25.1	0.0	4.3	chr8	28494136	28494181	(116644455)	+	(GCGTGC)n	Simple_repeat	1	46	(0)	3836284
16	13.3	2.1	6.2	chr8	28494831	28494877	(116643759)	+	(GGCGCCC)n	Simple_repeat	1	48	(0)	3836285
13	20.3	0.0	4.7	chr8	30658004	30658046	(114480590)	+	(CCGCCT)n	Simple_repeat	1	43	(0)	3840123
26	14.5	0.0	0.0	chr8	30658138	30658183	(114480453)	+	(GGC)n	Simple_repeat	1	46	(0)	3840124
410	21.5	9.7	10.2	chr8	30726906	30727071	(114411565)	+	MER5B	DNA/hAT-Charlie	14	178	(0)	3840307
11	17.2	7.7	0.0	chr8	30727772	30727810	(114410826)	+	(CGCGCGC)n	Simple_repeat	1	42	(0)	3840308
890	16.1	1.2	2.4	chr8	30728259	30728426	(114410210)	C	FRAM	SINE/Alu	(10)	166	1	3840309
2014	12.1	1.0	2.2	chr8	33473442	33473754	(111664882)	+	AluJo	SINE/Alu	1	309	(3)	3844559
2030	14.6	1.3	2.9	chr8	37105698	37106012	(108032624)	C	AluJb	SINE/Alu	(1)	311	2	3849841
270	38.4	10.4	4.6	chr8	37106085	37106390	(108032246)	+	L2b	LINE/L2	3024	3349	(26)	3849835
15	4.7	0.0	0.0	chr8	37226587	37226608	(107912028)	+	(ATTT)n	Simple_repeat	1	22	(0)	3850017
1925	13.7	1.7	0.0	chr8	37226612	37226896	(107911740)	C	AluSz6	SINE/Alu	(22)	290	1	3850018
2329	7.6	0.0	0.0	chr8	37677074	37677390	(107461246)	C	AluSc	SINE/Alu	(0)	309	3	3850764
1890	11.9	4.5	0.0	chr8	37735980	37736256	(107402380)	+	AluJr	SINE/Alu	1	290	(22)	3850886
13	8.8	0.0	12.8	chr8	37736502	37736548	(107402088)	+	G-rich	Low_complexity	1	47	(0)	3850887
14	16.6	8.5	0.0	chr8	38468108	38468154	(106670482)	+	(GCTCGGC)n	Simple_repeat	1	51	(0)	3852336
14	31.0	1.2	4.6	chr8	38468505	38468590	(106670046)	+	(GCCGCCC)n	Simple_repeat	1	87	(0)	3852337
335	28.6	5.3	3.1	chr8	38468957	38469086	(106669550)	+	MIRb	SINE/MIR	88	220	(48)	3852338
1185	3.5	0.0	0.0	chr8	41633840	41633983	(103504653)	+	L1PA8	LINE/L1	6009	6152	(20)	3857353
1172	23.0	5.3	13.5	chr8	42239049	42239210	(102899426)	+	L1MDa	LINE/L1	925	1089	(5544)	3858411
11996	10.7	5.7	10.4	chr8	42990640	42991394	(102147242)	C	L1MA3	LINE/L1	(814)	5332	4560	3859889
1454	16.2	0.8	0.4	chr8	46373479	46391801	(98746835)	C	GSAT	Satellite/centr	(70)	18399	1	3860839
1377	15.9	1.2	0.2	chr8	46408751	46423507	(98715129)	+	GSAT	Satellite/centr	1	14894	(0)	3860842
12	20.7	2.0	5.9	chr8	47188672	47188721	(97949915)	+	(CACCCAG)n	Simple_repeat	1	51	(0)	3861571
11	21.3	4.4	2.1	chr8	47188861	47188905	(97949731)	+	(CCGCCA)n	Simple_repeat	1	47	(0)	3861572
1938	11.5	12.7	0.0	chr8	48187971	48188239	(96950397)	+	AluSx1	SINE/Alu	1	308	(4)	3863080
210	35.6	0.0	1.4	chr8	51618679	51618752	(93519884)	+	MIRb	SINE/MIR	2	74	(194)	3867012
15	9.8	6.1	0.0	chr8	51898578	51898610	(93240026)	+	(CGAGGA)n	Simple_repeat	1	35	(0)	3867393
16	14.2	5.1	0.0	chr8	51970356	51970394	(93168242)	+	(CCTGCCC)n	Simple_repeat	1	41	(0)	3867519
5071	14.3	1.4	1.1	chr8	51970635	51972266	(93166370)	C	L1PB3	LINE/L1	(18)	6136	4539	3867520
31991	7.9	1.1	1.2	chr8	53138001	53143058	(91995578)	C	HERV9-int	LTR/ERV1	(3272)	5164	3	3869138
2676	5.5	0.0	0.0	chr8	53286497	53286805	(91851831)	+	AluY	SINE/Alu	1	309	(2)	3869306
601	24.1	16.9	7.5	chr8	53286806	53286958	(91851678)	C	LTR33	LTR/ERVL	(236)	279	101	3869305
1648	23.9	8.8	1.3	chr8	54662451	54662924	(90475712)	C	L1MEf	LINE/L1	(6009)	538	26	3871401
260	30.3	6.5	12.5	chr8	55338302	55338574	(89800062)	C	LTR16C	LTR/ERVL	(1)	488	232	3872280
475	21.0	0.0	1.0	chr8	56373528	56373628	(88765008)	+	MER5B	DNA/hAT-Charlie	79	178	(0)	3873859
308	32.4	1.9	1.0	chr8	56373692	56373794	(88764842)	C	L2a	LINE/L2	(14)	3412	3309	3873860
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
1485	28.3	1.5	2.6	chr8	57214477	57215085	(87923551)	C	MER50	LTR/ERV1	(123)	611	10	3874995
369	13.3	1.6	0.0	chr8	57566970	57567029	(87571607)	C	MER58D	DNA/hAT-Charlie	(0)	386	326	3875497
766	18.1	1.3	0.7	chr8	57567040	57567189	(87571447)	C	MER49	LTR/ERV1	(0)	923	773	3875498
356	25.6	10.6	4.6	chr8	57567285	57567556	(87571080)	C	L1ME4a	LINE/L1	(732)	5430	5139	3875495
10242	11.4	4.2	0.4	chr8	57776980	57778496	(87360140)	+	THE1D-int	LTR/ERVL-MaLR	3	1580	(0)	3875731
40	0.0	0.0	0.0	chr8	58553556	58553592	(86585044)	+	(GGGCTG)n	Simple_repeat	1	37	(0)	3876759
15	12.2	0.0	0.0	chr8	58659589	58659615	(86479021)	+	(GCT)n	Simple_repeat	1	27	(0)	3876891
251	29.8	11.1	9.8	chr8	58812330	58812809	(86325827)	+	L2a	LINE/L2	2936	3422	(4)	3877125
102	21.7	4.1	0.7	chr8	59054775	59055040	(86083596)	+	A-rich	Low_complexity	1	277	(0)	3877430
301	29.5	5.0	2.1	chr8	59055533	59055629	(86083007)	+	L1M5	LINE/L1	4793	4892	(1254)	3877431
1685	18.5	2.4	0.0	chr8	59089597	59089883	(86048753)	C	AluJb	SINE/Alu	(18)	294	1	3877461
13	24.7	0.0	0.0	chr8	63085735	63085772	(82052864)	+	G-rich	Low_complexity	1	38	(0)	3882685
12	13.7	10.0	0.0	chr8	63168653	63168692	(81969944)	+	(CGAGAGAG)n	Simple_repeat	1	44	(0)	3882838
12	5.6	0.0	0.0	chr8	63168758	63168776	(81969860)	+	(CGG)n	Simple_repeat	1	19	(0)	3882839
14	5.0	0.0	0.0	chr8	63168838	63168858	(81969778)	+	(GGC)n	Simple_repeat	1	21	(0)	3882840
13	17.5	0.0	2.9	chr8	63169077	63169110	(81969526)	+	(GCGG)n	Simple_repeat	1	34	(0)	3882841
34	0.0	0.0	0.0	chr8	65841964	65841994	(79296642)	+	(GCC)n	Simple_repeat	1	31	(0)	3886499
16	5.5	10.0	2.3	chr8	65842097	65842164	(79296472)	+	(GCGCCCA)n	Simple_repeat	1	73	(0)	3886500
12	13.7	0.0	0.0	chr8	66177114	66177137	(78961499)	+	(GCA)n	Simple_repeat	1	24	(0)	3886967
17	19.9	2.1	2.0	chr8	66177289	66177336	(78961300)	+	(CGGCTG)n	Simple_repeat	1	49	(0)	3886968
16	23.2	0.0	2.1	chr8	66712880	66712926	(78425710)	+	(GGCGG)n	Simple_repeat	1	47	(0)	3887940
17	24.9	1.2	6.2	chr8	67343866	67343945	(77794691)	+	(CGCGG)n	Simple_repeat	1	81	(0)	3889098
246	29.4	4.2	1.1	chr8	67634704	67634798	(77503838)	C	L2a	LINE/L2	(5)	3421	3284	3889578
1787	18.9	1.0	1.0	chr8	67634897	67635187	(77503449)	C	AluJb	SINE/Alu	(21)	291	1	3889579
4483	19.6	3.3	1.0	chr8	67826867	67827608	(77311028)	C	MER92-int	LTR/ERV1	(4470)	748	3	3889874
825	22.4	10.7	13.4	chr8	67827610	67827938	(77310698)	C	MER92D	LTR/ERV1	(0)	320	2	3889874
463	25.5	14.2	1.3	chr8	69813885	69814043	(75324593)	+	MIRb	SINE/MIR	19	201	(67)	3892630
16	28.6	1.4	2.8	chr8	70402238	70402308	(74736328)	+	(GGTGGA)n	Simple_repeat	1	72	(0)	3893734
26	0.0	0.0	0.0	chr8	71362156	71362180	(73776456)	+	(T)n	Simple_repeat	1	25	(0)	3895128
21	18.8	0.0	0.0	chr8	72537121	72537163	(72601473)	+	GA-rich	Low_complexity	1	43	(0)	3896585
29	0.0	3.2	0.0	chr8	72537354	72537384	(72601252)	+	(CCGCCCT)n	Simple_repeat	1	32	(0)	3896586
395	28.6	5.2	5.7	chr8	74734546	74734756	(70403880)	+	OldhAT1	DNA/hAT-Ac	1885	2094	(754)	3900044
284	28.9	13.1	0.6	chr8	75148704	75148870	(69989766)	+	MIRb	SINE/MIR	78	268	(0)	3900598
891	32.0	12.9	6.1	chr8	79130822	79131628	(66007008)	+	L2a	LINE/L2	2345	3224	(202)	3905546
1674	12.6	1.8	9.7	chr8	79131645	79131953	(66006683)	+	AluJo	SINE/Alu	24	307	(5)	3905547
309	29.7	5.1	3.5	chr8	79131981	79132095	(66006541)	+	L2a	LINE/L2	3305	3421	(5)	3905546
44	31.5	1.7	1.1	chr8	80873607	80873781	(64264855)	+	(CTC)n	Simple_repeat	1	178	(0)	3908487
24	21.8	4.4	3.2	chr8	81112145	81112234	(64026402)	+	G-rich	Low_complexity	1	94	(0)	3908830
25	19.4	5.6	0.0	chr8	84183092	84183162	(60955474)	+	(GCGGCA)n	Simple_repeat	1	75	(0)	3912802
24	25.0	2.1	4.2	chr8	84183290	84183382	(60955254)	+	(CGC)n	Simple_repeat	1	95	(0)	3912803
35	17.9	0.0	0.0	chr8	84183611	84183673	(60954963)	+	(T)n	Simple_repeat	1	63	(0)	3912804
1568	15.0	9.2	4.3	chr8	85257444	85257723	(59880913)	+	AluJb	SINE/Alu	6	300	(12)	3914306
230	15.6	0.0	0.0	chr8	85257740	85257771	(59880865)	C	AluSx	SINE/Alu	(75)	227	196	3914307
954	11.5	0.0	8.6	chr8	85257780	85257931	(59880705)	C	AluSx	SINE/Alu	(173)	139	1	3914307
9728	15.1	3.6	0.3	chr8	87705607	87707182	(57431454)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	3	3917663
17	3.6	6.9	0.0	chr8	88327250	88327278	(56811358)	+	(CTCC)n	Simple_repeat	1	31	(0)	3918471
35	29.0	0.0	0.9	chr8	88327496	88327602	(56811034)	+	(CGC)n	Simple_repeat	1	107	(0)	3918472
19	0.0	0.0	0.0	chr8	88327748	88327764	(56810872)	+	(GC)n	Simple_repeat	1	17	(0)	3918473
41	5.7	1.8	1.7	chr8	88327765	88327821	(56810815)	+	(CA)n	Simple_repeat	1	58	(0)	3918474
14	26.7	1.8	1.8	chr8	88327822	88327859	(56810777)	+	(CGCA)n	Simple_repeat	1	38	(0)	3918475
12	14.6	0.0	5.9	chr8	89902510	89902543	(55236093)	+	(CCGCC)n	Simple_repeat	1	34	(0)	3920466
455	15.7	5.3	0.0	chr8	91065575	91065663	(54072973)	+	MLT2B2	LTR/ERVL	469	562	(0)	3922014
12	12.0	3.7	0.0	chr8	94474885	94474911	(50663725)	+	(CCTC)n	Simple_repeat	1	28	(0)	3926895
14	13.8	0.0	5.6	chr8	94475139	94475174	(50663462)	+	(CCTGC)n	Simple_repeat	1	36	(0)	3926896
13	28.3	5.4	1.3	chr8	94720070	94720143	(50418493)	+	(GGCGGT)n	Simple_repeat	1	78	(0)	3927428
18	29.3	0.0	0.0	chr8	94949388	94949445	(50189191)	+	(GCCGC)n	Simple_repeat	1	58	(0)	3927879
2261	7.8	0.0	2.8	chr8	96406736	96407017	(48731619)	+	AluSx	SINE/Alu	38	311	(1)	3930236
705	14.6	11.2	0.7	chr8	96407032	96407183	(48731453)	+	L1MD2	LINE/L1	6190	6359	(0)	3930237
14	28.8	4.1	1.3	chr8	97776270	97776342	(47362294)	+	G-rich	Low_complexity	1	76	(0)	3932413
14	14.2	3.2	0.0	chr8	98825451	98825481	(46313155)	+	(GCC)n	Simple_repeat	1	32	(0)	3934227
13	21.3	0.0	0.0	chr8	99012974	99013006	(46125630)	+	(GCCGCA)n	Simple_repeat	1	33	(0)	3934592
5333	16.5	2.9	1.1	chr8	99024362	99025395	(46113241)	C	L1MA5	LINE/L1	(1055)	6507	5454	3934610
14	29.1	0.0	3.5	chr8	100310098	100310155	(44828481)	+	(CCT)n	Simple_repeat	1	58	(0)	3936538
967	13.1	4.6	0.0	chr8	100988570	100988714	(44149922)	+	AluJb	SINE/Alu	161	312	(0)	3937922
18	10.8	0.0	0.0	chr8	100988717	100988747	(44149889)	+	(AAAG)n	Simple_repeat	1	31	(0)	3937923
14	14.8	8.8	4.1	chr8	101501465	101501535	(43637101)	+	GA-rich	Low_complexity	1	74	(0)	3938874
203	29.1	1.8	1.8	chr8	101501669	101501724	(43636912)	C	L3b	LINE/CR1	(0)	5232	5177	3938875
267	13.1	4.7	11.6	chr8	101640075	101640143	(43498493)	C	MER5B	DNA/hAT-Charlie	(0)	178	115	3939123
334	26.1	10.1	1.5	chr8	101640144	101640279	(43498357)	+	MIRb	SINE/MIR	43	191	(77)	3939124
12	19.3	0.0	10.3	chr8	102239559	102239616	(42899020)	+	(CCTCC)n	Simple_repeat	1	58	(0)	3940006
18	16.9	0.0	0.0	chr8	102239873	102239905	(42898731)	+	(GT)n	Simple_repeat	1	33	(0)	3940007
12	25.1	4.3	0.0	chr8	102239906	102239918	(42898718)	+	(AGTG)n	Simple_repeat	2	49	(0)	3940008
5804	10.1	1.1	1.8	chr8	102397844	102398500	(42740136)	+	L1ME1	LINE/L1	4509	5170	(976)	3940237
10687	13.1	1.3	0.6	chr8	103270572	103272190	(41866446)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	3942043
1102	26.4	8.3	1.8	chr8	103340280	103340672	(41797964)	C	MamRep1527	LTR	(60)	909	489	3942145
11	12.8	8.8	0.0	chr8	104223406	104223439	(40915197)	+	(CCGCCT)n	Simple_repeat	1	37	(0)	3943387
30	0.0	0.0	0.0	chr8	105318846	105318873	(39819763)	+	(GCG)n	Simple_repeat	1	28	(0)	3944980
16	29.0	0.0	0.0	chr8	105318884	105318937	(39819699)	+	(AGCCGC)n	Simple_repeat	1	54	(0)	3944981
19945	14.3	1.8	1.1	chr8	106096106	106102326	(39036310)	+	L1MA3	LINE/L1	8	7724	(0)	3946023
20	28.3	3.6	1.2	chr8	106270272	106270354	(38868282)	+	(CGC)n	Simple_repeat	1	86	(0)	3946268
13	27.0	3.8	0.0	chr8	106270443	106270495	(38868141)	+	(GCGCCTG)n	Simple_repeat	1	55	(0)	3946269
10477	13.3	1.6	0.3	chr8	106673009	106674616	(38464020)	+	THE1D-int	LTR/ERVL-MaLR	3	1631	(0)	3946915
18	3.7	3.6	0.0	chr8	108787618	108787645	(36350991)	+	(GGCGG)n	Simple_repeat	1	29	(0)	3949880
382	24.5	13.0	0.0	chr8	109334695	109334788	(35803848)	C	MIR3	SINE/MIR	(15)	193	86	3950699
515	24.8	9.8	8.8	chr8	109625014	109625344	(35513292)	+	L1MC5a	LINE/L1	2420	2754	(23)	3951107
1702	18.5	1.0	0.3	chr8	109625429	109625720	(35512916)	C	AluJr	SINE/Alu	(18)	294	1	3951109
5106	12.2	1.3	1.0	chr8	110059854	110060633	(35078003)	+	LTR1	LTR/ERV1	1	782	(1)	3951673
16870	15.6	2.8	2.9	chr8	110060781	110063666	(35074970)	+	HUERS-P2-int	LTR/ERV1	204	3088	(0)	3951674
16263	18.1	3.5	3.1	chr8	111411542	111416659	(33721977)	C	L1PA16	LINE/L1	(554)	6381	1181	3953488
2190	13.1	3.9	0.6	chr8	114229786	114230137	(30908499)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3957102
5753	17.2	3.2	0.1	chr8	114230327	114231271	(30907365)	+	LTR1D	LTR/ERV1	1	975	(0)	3957103
508	34.3	8.0	7.1	chr8	114412635	114412821	(30725815)	+	L1MEc	LINE/L1	1276	1432	(4991)	3957310
489	18.6	0.0	2.9	chr8	114412823	114412924	(30725712)	+	AluJb	SINE/Alu	214	312	(0)	3957313
400	27.6	0.0	13.2	chr8	114412936	114413102	(30725534)	+	L1MEc	LINE/L1	1429	1573	(4849)	3957310
589	23.6	3.4	1.4	chr8	115334209	115334354	(29804282)	C	MER5C1	DNA/hAT-Charlie	(114)	149	1	3958554
861	23.1	5.5	2.4	chr8	115334355	115334600	(29804036)	+	LTR16E1	LTR/ERVL	284	537	(1)	3958552
16	5.2	0.0	0.0	chr8	118175025	118175044	(26963592)	+	(A)n	Simple_repeat	1	20	(0)	3962842
5214	11.6	3.0	2.0	chr8	118175045	118176019	(26962617)	+	L1PA15	LINE/L1	4692	5660	(505)	3962843
3455	17.4	7.8	1.2	chr8	119649602	119650508	(25488128)	+	L1MB8	LINE/L1	5187	6178	(0)	3965125
55	0.0	0.0	0.0	chr8	122147805	122147851	(22990785)	+	(CA)n	Simple_repeat	1	47	(0)	3969448
217	29.3	6.2	2.6	chr8	123073118	123073194	(22065442)	+	L2b	LINE/L2	3281	3360	(15)	3971113
311	18.8	5.9	0.0	chr8	123157591	123157654	(21980982)	C	L2b	LINE/L2	(15)	3360	3293	3971277
22	22.0	0.0	0.0	chr8	123157699	123157742	(21980894)	+	(AC)n	Simple_repeat	1	44	(0)	3971278
22	10.8	0.0	0.0	chr8	123158008	123158038	(21980598)	+	(T)n	Simple_repeat	1	31	(0)	3971279
3008	5.3	1.4	0.5	chr8	123607397	123607814	(21530822)	+	L1P3	LINE/L1	3013	3434	(2712)	3972225
1957	16.7	0.0	0.6	chr8	123607819	123608129	(21530507)	C	AluJb	SINE/Alu	(3)	309	1	3972226
16	17.7	0.0	2.5	chr8	123768660	123768699	(21369937)	+	(GGCCGC)n	Simple_repeat	1	40	(0)	3972547
390	31.9	9.6	7.7	chr8	123769039	123769466	(21369170)	C	L2c	LINE/L2	(41)	3346	2910	3972548
1216	10.1	28.3	0.9	chr8	129882916	129883132	(15255504)	+	AluSg	SINE/Alu	1	300	(10)	3983868
496	28.6	1.7	4.2	chr8	134505068	134505304	(10633332)	+	L2a	LINE/L2	3196	3426	(0)	3992415
259	26.7	19.6	0.0	chr8	140050366	140050451	(5088185)	C	MIRb	SINE/MIR	(48)	220	114	4001270
534	22.3	4.5	5.1	chr8	140931597	140931652	(4206984)	+	MER96B	DNA/hAT-Tip100	263	315	(102)	4002819
2059	12.2	2.9	1.0	chr8	140931653	140931954	(4206682)	+	AluJb	SINE/Alu	1	308	(4)	4002820
534	22.3	4.5	5.1	chr8	140931955	140932053	(4206583)	+	MER96B	DNA/hAT-Tip100	316	417	(0)	4002819
652	33.7	4.5	0.0	chr8	141374929	141375225	(3763411)	+	MER46C	DNA/TcMar-Tigger	28	338	(0)	4003557
212	21.3	0.0	6.1	chr8	141375226	141375274	(3763362)	C	MIR3	SINE/MIR	(114)	154	106	4003558
16	16.1	2.8	1.4	chr8	143617538	143617580	(1521056)	+	G-rich	Low_complexity	1	43	(0)	4006383
2200	9.7	0.3	0.3	chr8	143618327	143618626	(1520010)	+	AluSz	SINE/Alu	1	300	(12)	4006384
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
2053	13.7	1.9	0.3	chr8	144616931	144617236	(521400)	+	AluSz	SINE/Alu	2	312	(0)	4007823
33	25.6	4.6	3.1	chr8	144827216	144827367	(311269)	+	(CCCGGC)n	Simple_repeat	1	159	(0)	4008164
200	31.6	11.1	1.3	chr8	144844110	144844263	(294373)	+	MIRb	SINE/MIR	84	254	(14)	4008187
13	14.7	3.3	0.0	chr8	144853441	144853470	(285166)	+	(GGAGC)n	Simple_repeat	1	31	(0)	4008203
411	15.9	5.8	2.3	chr8	144853539	144853640	(284996)	C	LTR54	LTR/ERV1	(391)	107	1	4008204
1942	17.2	1.3	0.0	chr9	789328	789657	(137605060)	+	AluJb	SINE/Alu	1	312	(0)	4009724
16	23.2	1.9	1.9	chr9	976573	976624	(137418093)	+	G-rich	Low_complexity	1	53	(0)	4010079
4923	12.1	1.6	1.5	chr9	1008305	1009099	(137385618)	+	L1MA4A	LINE/L1	5507	6302	(1)	4010124
19	33.5	0.0	0.0	chr9	1051740	1051813	(137342904)	+	(GAC)n	Simple_repeat	1	74	(0)	4010203
54	4.5	7.5	1.0	chr9	4339789	4339899	(134054818)	+	(AGGGGG)n	Simple_repeat	1	118	(0)	4014878
517	29.6	1.3	0.0	chr9	4829821	4829972	(133564745)	+	MER102b	DNA/hAT-Charlie	188	341	(0)	4015744
13	26.4	3.2	3.1	chr9	5628961	5629022	(132765695)	+	(GCGCG)n	Simple_repeat	1	64	(0)	4016814
17	14.2	0.0	0.0	chr9	5629194	5629224	(132765493)	+	(GCC)n	Simple_repeat	1	31	(0)	4016815
4174	19.1	17.0	0.7	chr9	5788137	5789554	(132605163)	+	L1MC4	LINE/L1	99	1767	(4448)	4017004
468	20.2	4.5	0.0	chr9	5789555	5789638	(132605079)	C	AluJb	SINE/Alu	(22)	290	203	4017005
273	17.1	0.0	0.0	chr9	5789666	5789706	(132605011)	C	AluJb	SINE/Alu	(43)	269	229	4017006
1532	18.6	2.6	0.4	chr9	5789715	5789977	(132604740)	C	AluJo	SINE/Alu	(43)	269	1	4017007
1871	20.5	14.1	0.2	chr9	5848084	5848518	(132546199)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	4017113
30	27.1	1.7	7.2	chr9	6645353	6645529	(131749188)	+	(GGCCCC)n	Simple_repeat	1	180	(0)	4018392
32	31.4	3.9	0.6	chr9	8857657	8857810	(129536907)	+	(GCC)n	Simple_repeat	1	160	(0)	4021665
22	22.8	1.6	1.5	chr9	8857907	8857915	(129536802)	+	(TCCCCC)n	Simple_repeat	1	64	(0)	4021666
24	13.2	1.9	3.6	chr9	8857916	8857969	(129536748)	+	(CCT)n	Simple_repeat	1	55	(0)	4021667
11	22.9	1.7	6.8	chr9	8858018	8858075	(129536642)	+	(CTCCCG)n	Simple_repeat	1	59	(0)	4021668
34	5.3	0.0	0.0	chr9	8858086	8858125	(129536592)	+	(CTC)n	Simple_repeat	1	40	(0)	4021669
14	24.8	0.0	2.2	chr9	8858177	8858222	(129536495)	+	(CTTTCCT)n	Simple_repeat	1	46	(0)	4021670
12	0.0	5.3	0.0	chr9	13587492	13587510	(124807207)	+	(TTG)n	Simple_repeat	1	20	(0)	4027849
25	10.0	2.3	0.0	chr9	13587817	13587859	(124806858)	+	(CCT)n	Simple_repeat	1	44	(0)	4027850
12	39.5	0.0	2.8	chr9	13588018	13588088	(124806629)	+	(TGTA)n	Simple_repeat	1	71	(0)	4027851
6826	21.7	7.9	9.2	chr9	15430550	15430892	(122963825)	+	L1MC4a	LINE/L1	5677	6000	(1950)	4030529
1995	20.2	19.4	0.5	chr9	15430893	15431514	(122963203)	+	LTR41	LTR/ERVL	1	768	(0)	4030533
6826	21.7	7.9	9.2	chr9	15431515	15431907	(122962810)	+	L1MC4a	LINE/L1	6001	6404	(1546)	4030529
26	13.7	0.0	2.0	chr9	15513156	15513206	(122881511)	+	G-rich	Low_complexity	1	51	(0)	4030661
493	26.2	13.9	2.7	chr9	15513437	15513620	(122881097)	C	MIRb	SINE/MIR	(57)	211	4	4030662
205	32.5	11.3	4.5	chr9	15513889	15513987	(122880730)	+	L2c	LINE/L2	3244	3357	(30)	4030663
2786	4.3	0.0	0.7	chr9	15551211	15551512	(122843205)	C	AluY	SINE/Alu	(11)	300	1	4030753
1122	14.4	0.0	0.0	chr9	15551532	15551684	(122843033)	+	AluJb	SINE/Alu	160	312	(0)	4030754
23	21.8	1.0	8.0	chr9	16727115	16727213	(121667504)	+	(GCGG)n	Simple_repeat	1	100	(0)	4032281
2449	6.0	0.0	0.0	chr9	17127930	17128235	(121266482)	C	AluY	SINE/Alu	(0)	311	1	4032968
7651	19.5	3.2	0.3	chr9	18241610	18243276	(120151441)	+	L1M3	LINE/L1	3217	4933	(1207)	4034386
7162	13.9	3.8	1.2	chr9	18812562	18812967	(119581750)	C	L1M2	LINE/L1	(1012)	5131	4706	4035168
2417	10.1	0.7	0.0	chr9	18812968	18813263	(119581454)	C	AluSc	SINE/Alu	(11)	298	1	4035169
1776	25.6	12.3	6.8	chr9	19045347	19045824	(119348893)	+	HAL1	LINE/L1	366	882	(1625)	4035445
221	29.1	9.1	2.6	chr9	19103188	19103300	(119291417)	+	MIRc	SINE/MIR	25	145	(123)	4035564
446	28.9	6.3	10.8	chr9	19103223	19103379	(119291338)	+	L2	LINE/L2	335	494	(2925)	4035565
2680	6.2	0.3	1.0	chr9	19103380	19103688	(119291029)	C	AluSq	SINE/Alu	(6)	307	1	4035566
9984	12.0	2.1	5.3	chr9	22197345	22198977	(116195740)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	4040264
16	4.5	0.0	0.0	chr9	23821697	23821719	(114572998)	+	(GGC)n	Simple_repeat	1	23	(0)	4042332
19	6.5	3.1	0.0	chr9	23821748	23821779	(114572938)	+	(CCGCG)n	Simple_repeat	1	33	(0)	4042333
231	24.3	2.6	1.3	chr9	24246237	24246311	(114148406)	C	MIR	SINE/MIR	(4)	258	183	4042865
501	31.5	4.2	3.5	chr9	25540298	25540557	(112854160)	C	MIR	SINE/MIR	(0)	262	1	4044494
12	25.2	5.2	1.6	chr9	26892177	26892234	(111502483)	+	A-rich	Low_complexity	1	61	(0)	4046296
11	22.1	5.4	3.4	chr9	33676731	33676786	(104717931)	+	(TGGCTC)n	Simple_repeat	1	59	(0)	4055806
30	0.0	0.0	0.0	chr9	33677010	33677037	(104717680)	+	(GCC)n	Simple_repeat	1	28	(0)	4055807
15	12.0	0.0	0.0	chr9	33677312	33677338	(104717379)	+	(CGC)n	Simple_repeat	1	27	(0)	4055808
15	0.0	0.0	0.0	chr9	33677386	33677404	(104717313)	+	(GCC)n	Simple_repeat	1	19	(0)	4055809
3051	26.7	5.9	8.1	chr9	33677515	33678799	(104715918)	C	L1M4	LINE/L1	(1344)	4802	3485	4055810
22	3.1	3.0	0.0	chr9	33818366	33818399	(104576318)	+	(GGGGGT)n	Simple_repeat	1	35	(0)	4056035
1978	15.7	0.3	0.7	chr9	34139429	34139727	(104254990)	+	AluJb	SINE/Alu	1	298	(14)	4056807
231	29.9	3.6	4.5	chr9	34139763	34139874	(104254843)	+	L1MEi	LINE/L1	271	381	(1831)	4056808
3399	18.9	4.8	1.3	chr9	35876193	35877223	(102517494)	C	L1ME1	LINE/L1	(542)	6501	5432	4059545
34	16.9	0.0	0.0	chr9	36400879	36400944	(101993773)	+	(GCCCC)n	Simple_repeat	1	66	(0)	4060561
744	12.9	3.4	4.1	chr9	37079005	37079150	(101315567)	+	LTR23	LTR/ERV1	293	437	(0)	4062024
15	16.2	0.0	10.2	chr9	38068449	38068507	(100326210)	+	(GAGGCG)n	Simple_repeat	1	59	(0)	4063871
193	25.0	1.4	5.7	chr9	39809834	39809921	(98584796)	+	MIRb	SINE/MIR	115	195	(73)	4066646
3278	14.7	3.2	0.5	chr9	41274000	41274606	(97120111)	+	TAR1	Satellite/telo	1445	2068	(43)	4068410
1530	9.2	6.1	1.7	chr9	41352124	41354769	(97039948)	C	GSATII	Satellite/centr	(32)	2763	1	4068503
37	0.0	0.0	0.0	chr9	41354770	41354803	(97039914)	+	(T)n	Simple_repeat	1	34	(0)	4068504
1465	12.4	6.1	1.8	chr9	41354804	41356504	(97038213)	C	GSATII	Satellite/centr	(32)	1773	1	4068505
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
2707	27.2	7.3	5.5	chr9	61855698	61856977	(76537740)	+	SST1	Satellite/centr	263	1561	(2)	4072475
15	5.6	0.0	0.0	chr9	61856982	61857000	(76537717)	+	(TG)n	Simple_repeat	1	19	(0)	4072477
23	25.6	1.7	0.0	chr9	61857000	61857059	(76537658)	+	(TC)n	Simple_repeat	1	61	(0)	4072478
1951	29.4	5.2	6.5	chr9	61857061	61858378	(76536339)	+	SST1	Satellite/centr	262	1562	(1)	4072479
3051	15.5	2.6	0.5	chr9	62838347	62838981	(75555736)	+	TAR1	Satellite/telo	1420	2068	(43)	4073704
556	20.2	1.8	9.8	chr9	62864476	62864711	(75530006)	C	MER52A	LTR/ERV1	(1538)	217	1	4073744
1381	16.6	4.3	4.0	chr9	62864713	62865033	(75529684)	+	LTR8	LTR/ERV1	365	686	(5)	4073745
415	28.0	2.0	1.0	chr9	63817237	63817537	(74577180)	+	LSAU	Satellite	1	303	(172)	4074767
2605	29.9	5.1	4.7	chr9	65388281	65390272	(73004445)	+	SST1	Satellite/centr	1	2001	(859)	4076190
1539	10.8	6.3	2.0	chr9	66263242	66267618	(72127099)	C	GSATII	Satellite/centr	(32)	4566	1	4077375
14	17.1	11.9	0.0	chr9	68705180	68705238	(69689479)	+	(GGCAGCC)n	Simple_repeat	1	66	(0)	4080300
35	0.0	5.0	0.0	chr9	68705613	68705652	(69689065)	+	(CCCCTCCCG)n	Simple_repeat	1	42	(0)	4080301
16	8.7	0.0	0.0	chr9	68780072	68780096	(69614621)	+	(CGG)n	Simple_repeat	1	25	(0)	4080420
17	13.2	0.0	2.9	chr9	68780223	68780257	(69614460)	+	(CGG)n	Simple_repeat	1	35	(0)	4080421
1958	11.7	6.7	1.1	chr9	70154528	70154810	(68239907)	C	AluJr	SINE/Alu	(11)	301	2	4082704
12	11.1	3.2	3.1	chr9	70420323	70420353	(67974364)	+	(CCCGCG)n	Simple_repeat	1	32	(0)	4083114
920	22.7	3.3	1.4	chr9	70747566	70747775	(67646942)	+	MER58C	DNA/hAT-Charlie	2	215	(0)	4083684
14	22.6	5.1	4.8	chr9	71910514	71910592	(66484125)	+	(CGCTCCC)n	Simple_repeat	1	83	(0)	4085497
16	20.0	2.5	0.0	chr9	71910975	71911014	(66483703)	+	(CCG)n	Simple_repeat	1	41	(0)	4085498
1761	21.5	3.0	0.8	chr9	73124548	73124932	(65269785)	+	MSTD	LTR/ERVL-MaLR	2	395	(1)	4087636
332	29.6	0.1	0.5	chr9	73124933	73124945	(65269772)	+	(AT)n	Simple_repeat	1	13	(0)	4087637
31	3.3	0.0	0.0	chr9	73124946	73124976	(65269741)	+	(AC)n	Simple_repeat	1	31	(0)	4087638
16	9.6	0.0	0.0	chr9	74246205	74246227	(64148490)	+	(A)n	Simple_repeat	1	23	(0)	4089117
16	4.5	0.0	0.0	chr9	74498818	74498840	(63895877)	+	(GGC)n	Simple_repeat	1	23	(0)	4089483
2097	15.7	2.0	1.3	chr9	75185632	75186018	(63208699)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	4090688
1740	19.9	0.0	0.0	chr9	76281663	76281948	(62112769)	C	AluJb	SINE/Alu	(26)	286	1	4092208
9237	12.8	4.3	1.2	chr9	76281949	76282056	(62112661)	+	Tigger1	DNA/TcMar-Tigger	1462	1566	(852)	4092206
225	12.2	15.5	0.0	chr9	76282056	76282104	(62112613)	C	Alu	SINE/Alu	(0)	166	109	4092209
28	0.0	0.0	0.0	chr9	76282121	76282147	(62112570)	+	(T)n	Simple_repeat	1	27	(0)	4092210
1066	13.5	0.7	0.0	chr9	76282148	76282295	(62112422)	C	AluJr	SINE/Alu	(42)	270	122	4092211
27	2.8	5.4	0.0	chr9	76282307	76282343	(62112374)	+	(TTTC)n	Simple_repeat	1	39	(0)	4092212
1458	18.4	0.8	0.0	chr9	76282381	76282613	(62112104)	C	AluJb	SINE/Alu	(73)	239	5	4092213
1387	29.1	11.9	5.5	chr9	77291381	77292540	(61102177)	C	L1MCc	LINE/L1	(5129)	1294	16	4094085
2580	9.3	3.5	0.5	chr9	79097323	79097713	(59297004)	C	L1PA13	LINE/L1	(3)	6160	5758	4096723
13	26.1	2.4	0.0	chr9	79572466	79572507	(58822210)	+	(GCG)n	Simple_repeat	1	43	(0)	4097447
10662	13.0	1.6	0.3	chr9	82915533	82917140	(55477577)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1631	3	4102118
18296	10.8	2.9	2.5	chr9	84112095	84118044	(54276673)	C	L1MA3	LINE/L1	(2)	7722	1746	4104091
36	0.0	0.0	0.0	chr9	84170767	84170797	(54223920)	+	(TG)n	Simple_repeat	1	31	(0)	4104184
14	20.6	0.0	8.5	chr9	88388989	88389047	(50005670)	+	G-rich	Low_complexity	1	59	(0)	4111079
2639	14.9	1.2	5.3	chr9	88693426	88693950	(49700767)	C	L1M3	LINE/L1	(1012)	5128	4626	4111593
3669	13.4	1.8	2.3	chr9	88693953	88694569	(49700148)	+	L1MA9	LINE/L1	5698	6311	(1)	4111594
475	20.8	2.1	3.3	chr9	88808637	88808774	(49585943)	+	LTR45B	LTR/ERV1	351	525	(0)	4111752
1792	21.2	8.7	8.1	chr9	88808775	88809261	(49585456)	+	MER74A	LTR/ERVL	39	528	(30)	4111754
12	19.7	0.0	0.0	chr9	88971605	88971633	(49423084)	+	(GGCCA)n	Simple_repeat	1	29	(0)	4111944
2939	17.3	3.1	4.8	chr9	93743299	93743918	(44650799)	C	MER21-int	LTR/ERVL	(359)	3832	3224	4118521
434	25.9	1.4	4.1	chr9	94002345	94002489	(44392228)	C	LTR41B	LTR/ERVL	(176)	582	442	4118879
1096	26.4	9.7	0.3	chr9	94002524	94002861	(44391856)	C	LTR41B	LTR/ERVL	(385)	373	1	4118879
26	0.0	0.0	0.0	chr9	94455157	94455181	(43939536)	+	(T)n	Simple_repeat	1	25	(0)	4119651
827	18.8	1.8	2.4	chr9	94455186	94455349	(43939368)	C	AluJb	SINE/Alu	(30)	282	120	4119652
872	14.2	2.2	1.6	chr9	94455355	94455514	(43939203)	C	FLAM_C	SINE/Alu	(153)	149	1	4119652
16	19.0	0.0	7.3	chr9	95426789	95426843	(42967874)	+	(CCCGG)n	Simple_repeat	1	55	(0)	4121215
6342	9.9	2.1	0.9	chr9	95534763	95536325	(42858392)	+	L1PREC2	LINE/L1	4436	6036	(124)	4121344
18	29.8	2.5	1.2	chr9	96450417	96450495	(41944222)	+	(GCG)n	Simple_repeat	1	81	(0)	4122913
275	33.7	8.5	1.1	chr9	96853946	96854119	(41540598)	C	MIR	SINE/MIR	(54)	208	21	4123559
14	23.2	4.7	3.0	chr9	96854182	96854245	(41540472)	+	(CCCCGCA)n	Simple_repeat	1	67	(0)	4123560
16	19.1	0.0	4.3	chr9	100098878	100098923	(38295794)	+	(GGCTG)n	Simple_repeat	1	46	(0)	4129547
156	10.7	3.8	5.8	chr9	101448749	101449113	(36945604)	+	GA-rich	Low_complexity	1	379	(0)	4131715
13	16.8	0.0	0.0	chr9	101449113	101449140	(36945577)	+	(AGGC)n	Simple_repeat	1	28	(0)	4131716
9127	14.2	3.4	3.7	chr9	102325065	102326648	(36068069)	+	THE1C-int	LTR/ERVL-MaLR	2	1580	(0)	4132882
15	26.3	5.4	1.3	chr9	107283703	107283776	(31110941)	+	G-rich	Low_complexity	1	78	(0)	4140362
18	14.7	0.0	0.0	chr9	107284483	107284512	(31110205)	+	(A)n	Simple_repeat	1	30	(0)	4140363
3334	21.0	5.7	3.9	chr9	107368569	107369409	(31025308)	+	MER21C	LTR/ERVL	21	877	(61)	4140524
4191	12.5	3.8	1.8	chr9	109589507	109590057	(28804660)	C	L1M2	LINE/L1	(1311)	4832	4274	4144803
13	27.4	0.0	6.2	chr9	111484194	111484257	(26910460)	+	G-rich	Low_complexity	1	64	(0)	4147933
21	25.2	1.4	2.7	chr9	111897052	111897125	(26497592)	+	(CCCTC)n	Simple_repeat	1	75	(0)	4148756
13	18.9	4.5	2.2	chr9	112333142	112333185	(26061532)	+	(CCGCGGA)n	Simple_repeat	1	46	(0)	4149606
35	24.5	3.9	2.2	chr9	112333644	112333773	(26060944)	+	(CGCCCC)n	Simple_repeat	1	135	(0)	4149607
737	30.1	4.7	0.8	chr9	112731628	112731895	(25662822)	C	Charlie29a	DNA/hAT-Charlie	(178)	541	263	4150398
2455	24.2	5.2	2.0	chr9	112731897	112732534	(25662183)	+	Zaphod	DNA/hAT-Tip100	1	659	(3372)	4150399
219	30.9	15.9	4.0	chr9	112784592	112784790	(25609927)	C	MIRc	SINE/MIR	(12)	256	30	4150517
848	28.2	4.0	7.5	chr9	112914435	112914552	(25480165)	+	LTR78	LTR/ERV1	1016	1122	(182)	4150732
955	34.0	4.7	2.7	chr9	113062933	113063595	(25331122)	+	L1MA9	LINE/L1	5622	6298	(14)	4150944
18	0.0	0.0	0.0	chr9	113150983	113151004	(25243713)	+	(GCG)n	Simple_repeat	1	22	(0)	4151083
1702	24.1	10.4	9.2	chr9	114317931	114318531	(24076186)	C	Zaphod	DNA/hAT-Tip100	(3388)	643	1	4153399
2003	12.4	0.7	1.1	chr9	114318575	114318857	(24075860)	+	AluSz	SINE/Alu	1	282	(30)	4153402
1151	24.2	8.3	11.7	chr9	114566883	114566984	(23827733)	C	MER65-int	LTR/ERV1	(3888)	2751	2652	4153933
1731	16.8	0.3	5.6	chr9	114566985	114567305	(23827412)	C	AluJr	SINE/Alu	(8)	304	1	4153939
1151	22.9	4.8	11.2	chr9	114567306	114567903	(23826814)	C	MER65-int	LTR/ERV1	(3988)	2651	1719	4153933
190	25.9	6.5	0.0	chr9	121597885	121597942	(16796775)	C	L2b	LINE/L2	(5)	3370	3309	4167344
12	27.0	0.0	2.2	chr9	122904489	122904534	(15490183)	+	GA-rich	Low_complexity	1	46	(0)	4169755
637	26.2	1.9	4.7	chr9	124040571	124040782	(14353935)	+	MIRb	SINE/MIR	63	268	(0)	4171765
14	27.4	3.2	1.5	chr9	124040885	124040947	(14353770)	+	G-rich	Low_complexity	1	65	(0)	4171766
25	14.0	0.0	0.0	chr9	124088645	124088684	(14306033)	+	(GT)n	Simple_repeat	1	40	(0)	4171884
334	23.8	21.1	5.2	chr9	124089228	124089400	(14305317)	+	MIRb	SINE/MIR	1	208	(60)	4171885
1048	14.8	11.7	0.0	chr9	124860847	124861042	(13533675)	C	AluJo	SINE/Alu	(17)	295	74	4173410
24	3.2	3.1	0.0	chr9	126612050	126612081	(11782636)	+	(CA)n	Simple_repeat	1	33	(0)	4176708
33	0.0	0.0	6.7	chr9	127224904	127224948	(11169769)	+	(GCGGG)n	Simple_repeat	1	45	(0)	4177819
26	21.7	2.4	3.5	chr9	127802798	127802882	(10591835)	+	(GGCGG)n	Simple_repeat	1	87	(0)	4179046
315	27.6	9.5	1.5	chr9	128685211	128685346	(9709371)	+	MIRb	SINE/MIR	99	246	(22)	4181091
1002	13.9	1.8	3.0	chr9	128922908	128922936	(9471781)	C	AluJo	SINE/Alu	(149)	163	135	4181647
2196	10.6	0.3	0.0	chr9	128922937	128923243	(9471474)	C	AluSq2	SINE/Alu	(0)	313	1	4181648
201	24.2	1.3	0.7	chr9	129027620	129027690	(9367027)	C	MIRc	SINE/MIR	(28)	180	109	4181909
36	24.4	3.7	4.7	chr9	129028160	129028322	(9366395)	+	(GCCC)n	Simple_repeat	1	169	(0)	4181910
13	14.8	0.0	3.1	chr9	130835203	130835234	(7559483)	+	(GGCGG)n	Simple_repeat	1	32	(0)	4185897
53	15.9	8.3	0.0	chr9	130835649	130835781	(7558936)	+	(TC)n	Simple_repeat	1	144	(0)	4185898
1759	15.2	1.6	7.9	chr9	131966081	131966410	(6428307)	+	AluJo	SINE/Alu	1	309	(3)	4188001
266	26.7	0.0	0.0	chr9	133180156	133180215	(5214502)	C	ERV24_Prim-int	LTR/ERV1	(5607)	2600	2541	4190198
2127	10.4	0.0	0.0	chr9	133180264	133180562	(5214155)	+	AluSz	SINE/Alu	1	299	(13)	4190200
21	16.3	1.7	4.9	chr9	133460213	133460272	(4934445)	+	(CCCGC)n	Simple_repeat	1	61	(0)	4190625
18	6.8	3.2	0.0	chr9	133460460	133460490	(4934227)	+	(GGGCGG)n	Simple_repeat	1	32	(0)	4190626
5649	21.2	5.7	2.9	chr9	134998755	135000000	(3394717)	+	MER83B-int	LTR/ERV1	57	1339	(3541)	4192637
3162	15.2	2.0	3.8	chr9	135000002	135001206	(3393511)	+	MER83B-int	LTR/ERV1	3161	4650	(230)	4192638
1899	13.9	1.6	5.9	chr9	136065650	136065838	(2328879)	+	AluJb	SINE/Alu	128	310	(2)	4193984
4865	17.5	2.9	3.0	chr9	136065839	136065911	(2328806)	+	L1MB8	LINE/L1	5132	5202	(944)	4193983
2312	12.9	0.3	0.0	chr9	136065912	136066222	(2328495)	+	AluSx1	SINE/Alu	1	312	(0)	4193986
1101	25.6	13.8	2.1	chr9	136315240	136315754	(2078963)	+	ERV3-16A3_I-int	LTR/ERVL	1160	1744	(3482)	4194255
12	20.2	2.9	0.0	chr9	136944255	136944288	(1450429)	+	G-rich	Low_complexity	1	35	(0)	4195030
877	26.1	6.9	3.6	chr9	137292854	137293057	(1101660)	C	L1M5	LINE/L1	(1669)	4477	4261	4195467
22	0.0	0.0	0.0	chr9	137293410	137293433	(1101284)	+	(A)n	Simple_repeat	1	24	(0)	4195469
624	31.1	5.3	1.3	chr9	137293459	137293767	(1100950)	+	L1ME2	LINE/L1	5832	6153	(11)	4195470
243	4.6	0.0	2.1	chr9	137355408	137355734	(1038983)	+	(GAGGAAG)n	Simple_repeat	1	327	(0)	4195528
429	24.7	15.6	1.0	chr9	137437407	137437598	(957119)	+	MLT1D	LTR/ERVL-MaLR	278	502	(3)	4195638
1891	14.7	0.7	1.6	chrX	2858180	2858486	(153182409)	+	AluSz	SINE/Alu	1	304	(8)	4363710
965	26.5	9.8	5.0	chrX	2858487	2858545	(153182350)	+	Charlie1b	DNA/hAT-Charlie	450	502	(21)	4363709
349	22.5	8.4	6.9	chrX	2858632	2858847	(153182048)	+	MER106B	DNA/hAT-Charlie	903	1049	(10)	4363711
2329	10.0	0.3	0.0	chrX	10202192	10202490	(145838405)	+	AluSz6	SINE/Alu	1	300	(12)	4376118
2053	12.5	0.3	1.7	chrX	10202491	10202668	(145838227)	+	AluJr	SINE/Alu	135	312	(0)	4376117
56	3.5	0.0	0.0	chrX	11427806	11427864	(144613031)	+	(GGA)n	Simple_repeat	1	59	(0)	4377997
1525	26.2	1.7	7.6	chrX	23953035	23953533	(132087362)	+	LTR16C	LTR/ERVL	13	481	(8)	4398465
11	20.6	5.1	0.0	chrX	24150109	24150147	(131890748)	+	(AGGCCGA)n	Simple_repeat	1	41	(0)	4398943
23	20.0	4.2	2.7	chrX	24150334	24150405	(131890490)	+	(GGC)n	Simple_repeat	1	75	(0)	4398944
14	22.6	0.0	2.3	chrX	36961931	36961977	(119078918)	+	A-rich	Low_complexity	1	45	(0)	4417015
13	14.3	2.3	6.7	chrX	37349563	37349606	(118691289)	+	G-rich	Low_complexity	1	45	(0)	4417288
11	15.2	2.4	7.0	chrX	37350039	37350080	(118690815)	+	G-rich	Low_complexity	1	43	(0)	4417289
403	9.3	9.6	2.6	chrX	38590030	38590106	(117450789)	C	L1MEc	LINE/L1	(2316)	4003	3921	4419224
1268	16.6	4.2	1.4	chrX	38590110	38590320	(117450575)	C	AluJr	SINE/Alu	(12)	300	84	4419225
4399	25.1	3.6	7.9	chrX	38590324	38591863	(117449032)	C	L1MEc	LINE/L1	(2391)	3928	2466	4419224
1317	11.3	20.7	0.4	chrX	41330453	41330683	(114710212)	C	AluSz	SINE/Alu	(22)	290	1	4424159
272	31.7	13.9	2.1	chrX	41330687	41330876	(114710019)	C	MIRc	SINE/MIR	(43)	225	10	4424160
1125	7.0	0.0	0.7	chrX	41331057	41331199	(114709696)	C	AluSc5	SINE/Alu	(167)	142	1	4424161
18	23.3	1.8	1.7	chrX	41923176	41923232	(114117663)	+	G-rich	Low_complexity	1	58	(0)	4425253
12	0.0	0.0	8.3	chrX	41923222	41923245	(114117650)	+	(GCCC)n	Simple_repeat	1	24	(0)	4425254
14	21.1	0.0	8.6	chrX	41923440	41923497	(114117398)	+	(GCG)n	Simple_repeat	1	58	(0)	4425255
2173	14.7	0.0	0.0	chrX	43003457	43003768	(113037127)	C	AluJo	SINE/Alu	(0)	312	1	4426747
583	19.1	0.9	2.5	chrX	43031747	43031864	(113009031)	+	MER21C	LTR/ERVL	13	128	(810)	4426778
793	19.7	0.0	0.0	chrX	43031877	43031998	(113008897)	C	FLAM_A	SINE/Alu	(20)	122	1	4426779
277	26.2	4.8	5.9	chrX	43031923	43032007	(113008888)	+	SVA_E	Retroposon/SVA	122	205	(1177)	4426780
5236	9.6	2.3	1.3	chrX	45205164	45206496	(110834399)	C	L1MA3	LINE/L1	(275)	7449	6093	4430491
9787	9.4	1.8	0.3	chrX	45206493	45208143	(110832752)	C	L1MA3	LINE/L1	(3650)	3915	2234	4430491
3033	15.7	2.1	0.5	chrX	45314421	45314977	(110725918)	+	L1MA9	LINE/L1	4576	5141	(999)	4430633
2393	13.8	9.1	0.9	chrX	46378942	46379364	(109661531)	C	LOR1b	LTR/ERV1	(0)	461	1	4432050
1819	18.6	0.0	0.3	chrX	47360742	47361052	(108679843)	C	AluJr	SINE/Alu	(2)	310	1	4433965
1188	16.7	2.2	5.6	chrX	47361053	47361063	(108679832)	+	Charlie5	DNA/hAT-Charlie	2290	2296	(328)	4433964
1957	10.7	6.3	0.4	chrX	47361064	47361344	(108679551)	C	AluSp	SINE/Alu	(12)	301	3	4433966
235	34.0	6.9	0.0	chrX	49102606	49102699	(106938196)	C	L2b	LINE/L2	(2)	3373	3273	4437496
2405	5.4	0.3	1.0	chrX	52921577	52921870	(103119025)	C	AluY	SINE/Alu	(19)	292	1	4442715
27	24.8	5.0	1.9	chrX	56563351	56563383	(99477512)	+	(CT)n	Simple_repeat	1	61	(43)	4448311
12	15.6	8.9	2.0	chrX	56563384	56563428	(99477467)	+	(CTCTG)n	Simple_repeat	1	49	(0)	4448312
12	26.6	2.0	3.9	chrX	56563408	56563458	(99477437)	+	(TTCT)n	Simple_repeat	1	52	(0)	4448313
27	24.8	5.0	1.9	chrX	56563429	56563449	(99477446)	+	(CT)n	Simple_repeat	62	104	(0)	4448311
17	24.4	1.9	0.0	chrX	57121834	57121886	(98919009)	+	(CCGCCC)n	Simple_repeat	1	54	(0)	4448819
185	28.3	0.0	3.6	chrX	63560474	63560528	(92480367)	+	MIR	SINE/MIR	17	69	(193)	4450261
15778	14.9	8.1	1.5	chrX	68969626	68972216	(87068679)	+	L1MA9	LINE/L1	3960	6733	(826)	4457320
2260	10.8	0.7	2.2	chrX	70122067	70122380	(85918515)	+	AluSq2	SINE/Alu	2	310	(3)	4459147
48	3.5	3.4	0.0	chrX	70122389	70122447	(85918448)	+	(CTCTCC)n	Simple_repeat	1	61	(0)	4459148
10304	4.1	0.7	8.0	chrX	70122448	70123902	(85916993)	+	SVA_B	Retroposon/SVA	35	1383	(0)	4459149
235	25.4	0.0	1.7	chrX	70172645	70172704	(85868191)	C	L2c	LINE/L2	(246)	3141	3083	4459253
596	7.7	0.0	0.0	chrX	71181542	71181619	(84859276)	+	MADE1	DNA/TcMar-Mariner	3	80	(0)	4460946
13	23.0	1.8	5.3	chrX	74924934	74924989	(81115906)	+	(CGCTGT)n	Simple_repeat	1	57	(0)	4466273
25	27.0	1.3	1.2	chrX	74924972	74925050	(81115845)	+	(CGC)n	Simple_repeat	1	80	(0)	4466274
32	31.3	0.8	1.6	chrX	74925326	74925447	(81115448)	+	(GCT)n	Simple_repeat	1	123	(0)	4466275
38	7.7	0.0	1.8	chrX	74925484	74925540	(81115355)	+	(CCT)n	Simple_repeat	1	57	(0)	4466276
17751	18.3	1.8	1.7	chrX	75131614	75138040	(80902855)	+	L1PA15	LINE/L1	1727	8160	(0)	4466461
6089	18.6	0.6	0.8	chrX	75766705	75768115	(80272780)	+	L1M1	LINE/L1	888	2359	(5206)	4467011
14	0.0	0.0	0.0	chrX	76427955	76427972	(79612923)	+	(CGC)n	Simple_repeat	1	18	(0)	4467492
16	21.3	2.6	0.0	chrX	85243850	85243887	(70797008)	+	(GC)n	Simple_repeat	1	39	(0)	4476826
43	4.3	0.0	0.0	chrX	85244124	85244171	(70796724)	+	(GGC)n	Simple_repeat	1	48	(0)	4476827
2161	5.2	0.0	4.8	chrX	85254644	85254831	(70786064)	+	AluY	SINE/Alu	136	311	(0)	4476837
3276	21.8	6.2	7.4	chrX	85254832	85254997	(70785898)	C	L1MD2	LINE/L1	(775)	5584	5428	4476835
20703	12.1	1.4	1.8	chrX	86196723	86201452	(69839443)	+	L1PA13	LINE/L1	2080	6783	(0)	4477834
12	16.9	2.9	2.8	chrX	96685070	96685104	(59355791)	+	(CGG)n	Simple_repeat	1	36	(0)	4489506
13	15.8	2.7	2.6	chrX	101357263	101357299	(54683596)	+	A-rich	Low_complexity	1	38	(0)	4495899
2087	13.5	1.3	1.0	chrX	103634329	103634631	(52406264)	+	AluJo	SINE/Alu	2	305	(7)	4498921
1482	20.3	7.8	7.1	chrX	103634632	103634682	(52406213)	+	MSTD	LTR/ERVL-MaLR	353	396	(0)	4498920
12	15.7	2.6	5.0	chrX	103919305	103919343	(52121552)	+	(CTTCCC)n	Simple_repeat	1	40	(0)	4499330
279	25.3	22.0	2.9	chrX	103919453	103919627	(52121268)	C	MIRb	SINE/MIR	(14)	254	37	4499331
1448	20.2	3.2	5.7	chrX	107401559	107401677	(48639218)	+	Looper	DNA/PiggyBac	840	959	(598)	4504096
1358	17.4	3.3	3.3	chrX	107401679	107401920	(48638975)	+	AluJo	SINE/Alu	50	291	(21)	4504098
46	0.0	0.0	0.0	chrX	107401998	107402036	(48638859)	+	(AT)n	Simple_repeat	1	39	(0)	4504099
33	23.2	1.7	5.0	chrX	107826209	107826325	(48214570)	+	(GCG)n	Simple_repeat	1	119	(0)	4504922
13	19.7	10.3	0.0	chrX	107826688	107826745	(48214150)	+	G-rich	Low_complexity	1	64	(0)	4504923
1282	22.6	3.6	2.6	chrX	109914222	109914525	(46126370)	C	MER46C	DNA/TcMar-Tigger	(0)	338	32	4507548
8365	10.6	0.8	0.3	chrX	111484374	111485668	(44555227)	C	L1M1	LINE/L1	(755)	5391	4090	4509962
33	0.0	0.0	0.0	chrX	115534373	115534403	(40506492)	+	(GTTTT)n	Simple_repeat	1	31	(0)	4515705
1376	16.2	6.7	1.2	chrX	115534412	115534541	(40506354)	C	AluJb	SINE/Alu	(45)	267	135	4515706
53	0.0	2.0	0.0	chrX	115534542	115534592	(40506303)	+	(ATTT)n	Simple_repeat	1	52	(0)	4515707
1376	16.2	6.7	1.2	chrX	115534593	115534702	(40506193)	C	AluJb	SINE/Alu	(191)	121	13	4515706
17	12.0	2.6	2.6	chrX	115968916	115968953	(40071942)	+	A-rich	Low_complexity	1	39	(0)	4516173
19	0.0	0.0	0.0	chrX	119067135	119067155	(36973740)	+	(A)n	Simple_repeat	1	21	(0)	4520409
508	27.1	12.1	4.1	chrX	119067608	119067926	(36972969)	C	L2c	LINE/L2	(10)	3377	3030	4520410
17	27.1	0.0	3.3	chrX	120250794	120250854	(35790041)	+	(CGG)n	Simple_repeat	1	61	(0)	4522654
1735	16.1	4.8	3.0	chrX	123713567	123713871	(32327024)	+	AluJb	SINE/Alu	1	311	(1)	4527159
1382	18.4	7.0	8.9	chrX	123713872	123714084	(32326811)	+	L1MC5	LINE/L1	8641	8843	(461)	4527157
4039	15.9	4.5	11.5	chrX	123716916	123717773	(32323122)	+	L1M4c	LINE/L1	4203	4966	(1410)	4527160
432	18.5	6.2	4.9	chrX	123717778	123717877	(32323018)	C	MER2	DNA/TcMar-Tigger	(0)	345	130	4527165
332	22.6	0.0	0.0	chrX	123717878	123717939	(32322956)	+	MER2	DNA/TcMar-Tigger	1	62	(283)	4527166
252	14.3	0.0	4.5	chrX	123717972	123718015	(32322880)	C	MER2	DNA/TcMar-Tigger	(284)	61	20	4527165
3090	15.6	3.3	3.3	chrX	123718038	123718477	(32322418)	+	L1M4c	LINE/L1	4972	5394	(985)	4527160
356	26.4	6.5	7.5	chrX	123764647	123764925	(32275970)	C	L1M3	LINE/L1	(2660)	3480	3205	4527272
38	0.0	0.0	0.0	chrX	123765232	123765266	(32275629)	+	(CCG)n	Simple_repeat	1	35	(0)	4527273
9833	14.6	4.2	0.4	chrX	127811516	127813082	(28227813)	+	THE1B-int	LTR/ERVL-MaLR	3	1631	(0)	4532677
18	16.8	0.0	0.0	chrX	130268800	130268834	(25772061)	+	GA-rich	Low_complexity	1	35	(0)	4536265
689	30.5	0.0	1.6	chrX	131841950	131842139	(24198756)	+	MIR	SINE/MIR	73	259	(3)	4538562
2893	18.6	3.0	2.8	chrX	134331240	134331497	(21709398)	+	L1MD	LINE/L1	4195	4448	(1698)	4542440
1318	2.5	3.0	0.0	chrX	134331498	134331656	(21709239)	+	L1PA5	LINE/L1	5987	6150	(4)	4542442
6390	16.4	2.5	3.3	chrX	134331657	134332396	(21708499)	C	L1M2	LINE/L1	(1291)	4852	4104	4542443
17	29.3	2.4	2.4	chrX	134549324	134549405	(21491490)	+	(GAGC)n	Simple_repeat	1	84	(0)	4542925
14	18.8	0.0	2.6	chrX	134549560	134549597	(21491298)	+	(CGGAG)n	Simple_repeat	1	38	(0)	4542926
340	28.9	6.0	1.1	chrX	141174590	141174731	(14866164)	C	MIR	SINE/MIR	(0)	262	121	4553422
1348	14.5	0.8	0.8	chrX	146579550	146579800	(9461095)	+	L1M2	LINE/L1	6001	6251	(1311)	4560678
6028	23.7	3.3	2.2	chrX	146579795	146582885	(9458010)	C	L1PBb	LINE/L1	(4575)	2356	90	4560687
65	9.3	1.6	1.6	chrX	147911979	147912111	(8128784)	+	(GGC)n	Simple_repeat	1	133	(0)	4562594
89	33.0	2.0	3.9	chrX	149504517	149505021	(6535874)	+	GA-rich	Low_complexity	1	515	(0)	4564707
13	25.1	0.0	2.3	chrX	149505177	149505220	(6535675)	+	(GCCGCA)n	Simple_repeat	1	44	(0)	4564708
1150	25.1	5.1	2.4	chrX	153838178	153838541	(2202354)	C	L1ME3F	LINE/L1	(732)	5511	5134	4570799
1789	15.2	6.8	0.0	chrX	153838542	153838830	(2202065)	C	AluJo	SINE/Alu	(1)	311	2	4570806
1150	27.2	5.3	3.3	chrX	153838831	153839105	(2201790)	C	L1ME3F	LINE/L1	(1013)	5133	4858	4570799
274	25.2	12.2	2.5	chrX	153999610	153999727	(2041168)	+	MER110	LTR/ERV1	23	153	(338)	4571066
616	16.7	0.0	0.0	chrX	153999855	153999962	(2040933)	+	MER110	LTR/ERV1	384	491	(0)	4571066
15	13.9	0.0	0.0	chrX	154000001	154000024	(2040871)	+	(T)n	Simple_repeat	1	24	(0)	4571067
1359	27.1	2.5	0.5	chrX	154980212	154980645	(1060250)	C	L1M1	LINE/L1	(5125)	2440	1998	4572702
1514	16.1	1.9	6.1	chrX	154980677	154980956	(1059939)	+	AluJr	SINE/Alu	1	268	(44)	4572703
236	31.1	6.2	0.7	chrX	155612308	155612443	(428452)	C	MIR3	SINE/MIR	(7)	201	58	4573529
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638