2198	11.0	0.7	1.3	chr1	1016061	1016360	(247940062)	C	AluSx1	SINE/Alu	(14)	298	1	1282
583	19.6	4.7	11.1	chr1	1265307	1265513	(247690909)	+	MER68	LTR/ERVL	160	352	(211)	1528
248	24.1	0.2	0.7	chr1	3421845	3422403	(245534019)	+	(CAGA)n	Simple_repeat	1	560	(0)	3979
59	17.4	2.7	3.3	chr1	6244934	6245081	(242711341)	+	(CCCTC)n	Simple_repeat	1	152	(0)	7899
251	29.3	0.0	8.2	chr1	6600343	6600377	(242356045)	+	L1ME3A	LINE/L1	6143	6173	(0)	8520
17	24.3	3.5	5.6	chr1	9588585	9588670	(239367752)	+	(GCC)n	Simple_repeat	1	89	(0)	13956
20	28.0	1.4	1.4	chr1	11650733	11650803	(237305619)	+	(CCT)n	Simple_repeat	1	72	(0)	18156
639	29.4	8.3	7.2	chr1	14148327	14148828	(234807594)	C	HAL1	LINE/L1	(1319)	1188	681	22678
36	11.3	0.0	0.0	chr1	14149034	14149091	(234807331)	+	(CCTT)n	Simple_repeat	1	58	(0)	22684
2379	9.5	0.6	1.9	chr1	14149092	14149406	(234807016)	C	AluSc8	SINE/Alu	(0)	311	1	22685
1229	24.2	11.6	6.5	chr1	15675455	15675662	(233280760)	+	L2a	LINE/L2	2567	2768	(651)	25794
203	12.3	0.3	0.0	chr1	15675663	15676016	(233280406)	+	(CCTA)n	Simple_repeat	1	355	(0)	25796
1229	24.6	10.3	5.9	chr1	15676017	15676343	(233280079)	+	L2a	LINE/L2	2769	3132	(294)	25794
70	14.3	0.0	1.6	chr1	18478516	18478670	(230477752)	+	GA-rich	Low_complexity	1	152	(0)	31752
59	0.0	0.0	0.0	chr1	18478671	18478723	(230477699)	+	(AGGC)n	Simple_repeat	1	53	(0)	31753
287	27.2	10.7	4.2	chr1	18478884	18479048	(230477374)	+	MIRc	SINE/MIR	30	206	(62)	31754
626	24.9	4.4	3.4	chr1	18955208	18955410	(230001012)	+	MIRb	SINE/MIR	17	224	(44)	32770
231	29.4	0.0	13.3	chr1	20560420	20560517	(228395905)	+	L2b	LINE/L2	3291	3387	(0)	36048
524	26.1	9.2	0.0	chr1	20561048	20561185	(228395237)	+	MLT1J2	LTR/ERVL-MaLR	25	176	(272)	36049
1743	14.5	6.1	1.4	chr1	22243159	22243441	(226712981)	+	AluJb	SINE/Alu	1	297	(15)	39714
33	0.0	0.0	0.0	chr1	22243442	22243472	(226712950)	+	(GAAG)n	Simple_repeat	1	31	(0)	39715
40	2.5	0.0	0.0	chr1	22243473	22243513	(226712909)	+	(AGGC)n	Simple_repeat	1	41	(0)	39716
41	29.5	2.5	5.0	chr1	22342488	22342722	(226613700)	+	(AGAGAC)n	Simple_repeat	1	241	(0)	39943
27	21.4	0.0	0.0	chr1	24863526	24863580	(224092842)	+	(GT)n	Simple_repeat	1	55	(0)	45886
2185	12.0	0.0	0.7	chr1	24863816	24864116	(224092306)	C	AluSz6	SINE/Alu	(13)	299	1	45887
14	18.9	4.8	0.0	chr1	25859472	25859513	(223096909)	+	(CCGGCC)n	Simple_repeat	1	44	(0)	47960
12	27.7	3.1	3.0	chr1	25859514	25859535	(223096887)	+	(CCGCC)n	Simple_repeat	1	66	(0)	47961
2156	8.7	1.6	0.3	chr1	27321449	27321748	(221634674)	+	AluSq2	SINE/Alu	1	304	(9)	51510
347	24.0	14.0	4.4	chr1	27321775	27321909	(221634513)	+	MIRb	SINE/MIR	114	263	(5)	51511
3654	9.9	0.4	5.2	chr1	29156731	29157306	(219799116)	C	LTR14	LTR/ERVK	(0)	548	1	56047
25	20.4	3.9	2.5	chr1	31413836	31413913	(217542509)	+	(GTCC)n	Simple_repeat	1	81	(0)	60630
38	2.6	0.0	0.0	chr1	35922598	35922637	(213033785)	+	(GCCT)n	Simple_repeat	1	40	(0)	69767
208	32.4	7.2	1.1	chr1	37990316	37990440	(210965982)	+	MIR3	SINE/MIR	15	154	(114)	73868
2524	6.9	0.0	0.0	chr1	39075811	39076116	(209880306)	C	AluY	SINE/Alu	(4)	307	2	76024
707	8.5	0.0	19.4	chr1	39076119	39076283	(209880139)	C	AluSx	SINE/Alu	(178)	134	2	76025
267	30.0	2.4	11.8	chr1	39076506	39076641	(209879781)	+	L2c	LINE/L2	3260	3382	(5)	76026
510	28.4	8.0	3.0	chr1	39524468	39524890	(209431532)	C	L2b	LINE/L2	(274)	3101	2665	76858
301	26.5	0.0	1.2	chr1	39525002	39525085	(209431337)	C	L2b	LINE/L2	(983)	2436	2354	76858
30	7.6	0.0	0.0	chr1	41044431	41044472	(207911950)	+	(AGGC)n	Simple_repeat	1	42	(0)	80097
186	24.3	2.6	12.9	chr1	41874703	41874787	(207081635)	C	MIR3	SINE/MIR	(25)	183	108	81602
15	23.1	2.3	2.3	chr1	43980082	43980124	(204976298)	+	(GT)n	Simple_repeat	1	44	(0)	85239
20	13.2	1.8	6.9	chr1	44632402	44632458	(204323964)	+	(CCCT)n	Simple_repeat	1	58	(0)	86404
385	27.0	0.8	3.1	chr1	46179477	46179606	(202776816)	C	MIRb	SINE/MIR	(127)	141	15	89501
13	29.6	4.8	0.0	chr1	46179760	46179822	(202776600)	+	GA-rich	Low_complexity	1	66	(0)	89502
18	22.4	0.0	0.0	chr1	46179929	46179964	(202776458)	+	GA-rich	Low_complexity	1	36	(0)	89503
40	2.6	0.0	0.0	chr1	46179965	46180003	(202776419)	+	(GT)n	Simple_repeat	1	39	(0)	89504
19	12.1	0.0	2.6	chr1	47333870	47333907	(201622515)	+	(CCCGC)n	Simple_repeat	1	38	(0)	91369
489	25.6	3.0	0.0	chr1	51331086	51331234	(197625188)	C	MIRc	SINE/MIR	(111)	157	5	98454
225	33.7	4.2	0.0	chr1	51331624	51331715	(197624707)	+	L3	LINE/CR1	3916	4011	(88)	98455
262	33.8	12.5	0.2	chr1	51331741	51332014	(197624408)	C	L2b	LINE/L2	(115)	3272	2968	98456
670	30.0	14.5	5.2	chr1	51622061	51622405	(197334017)	C	L2b	LINE/L2	(799)	2620	2228	99115
2328	17.3	11.8	4.2	chr1	51622406	51622925	(197333497)	C	MLT1F1	LTR/ERVL-MaLR	(4)	565	1	99119
16	21.3	0.0	0.0	chr1	52554162	52554194	(196402228)	+	(T)n	Simple_repeat	1	33	(0)	101093
2325	10.9	0.0	0.0	chr1	53469794	53470095	(195486327)	+	AluSz	SINE/Alu	1	302	(10)	103143
2150	6.8	0.0	0.4	chr1	54394696	54395001	(194561421)	C	AluY	SINE/Alu	(0)	311	2	104983
580	24.9	14.8	2.8	chr1	54715147	54715633	(194240789)	+	L2b	LINE/L2	2808	3373	(2)	105732
437	25.3	19.1	0.5	chr1	54716193	54716383	(194240039)	+	MIRb	SINE/MIR	27	261	(7)	105733
10991	22.0	5.8	3.5	chr1	54825349	54826945	(194129477)	C	L1M2	LINE/L1	(5259)	2307	722	105977
181	22.4	6.2	7.3	chr1	54836010	54836091	(194120331)	+	L3	LINE/CR1	803	883	(3216)	106006
61	3.2	0.0	0.0	chr1	54836267	54836330	(194120092)	+	(GCCT)n	Simple_repeat	1	64	(0)	106007
2307	11.1	0.0	0.0	chr1	56624074	56624370	(192332052)	C	AluSq2	SINE/Alu	(15)	298	2	109211
7566	12.3	3.3	1.9	chr1	56624371	56624493	(192331929)	+	THE1D-int	LTR/ERVL-MaLR	1522	1631	(0)	109210
2082	13.1	5.8	0.6	chr1	56624494	56624854	(192331568)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	109210
347	27.0	7.6	2.8	chr1	56660722	56660847	(192295575)	+	MIRb	SINE/MIR	105	228	(2)	109282
423	31.2	3.1	0.8	chr1	57223895	57224020	(191732402)	+	MIRc	SINE/MIR	4	132	(136)	110383
330	36.2	2.6	6.1	chr1	57224009	57224205	(191732217)	+	L2b	LINE/L2	3181	3370	(5)	110384
765	33.3	1.0	0.7	chr1	57273233	57273531	(191682891)	+	LTR16B2	LTR/ERVL	1	300	(162)	110483
19	3.7	0.0	0.0	chr1	57273532	57273553	(191682869)	+	(TGCC)n	Simple_repeat	1	22	(0)	110484
70	0.0	0.0	0.0	chr1	57273554	57273615	(191682807)	+	(CCTT)n	Simple_repeat	1	62	(0)	110485
381	25.0	1.7	0.0	chr1	57273622	57273737	(191682685)	+	LTR16B2	LTR/ERVL	273	390	(72)	110483
489	25.1	2.1	2.3	chr1	58841945	58842089	(190114333)	C	L2a	LINE/L2	(1)	3425	3234	113635
1556	23.1	9.7	1.6	chr1	58842090	58842516	(190113906)	C	MLT1C	LTR/ERVL-MaLR	(2)	465	1	113636
292	30.2	8.7	2.3	chr1	61595090	61595218	(187361204)	+	MLT1I	LTR/ERVL-MaLR	13	150	(261)	118411
376	20.8	3.1	10.5	chr1	61595350	61595500	(187360922)	+	MLT1H	LTR/ERVL-MaLR	418	549	(0)	118412
437	30.1	9.8	9.8	chr1	61683641	61684119	(187272303)	C	MLT1K	LTR/ERVL-MaLR	(27)	568	90	118586
763	27.9	6.5	4.8	chr1	61684219	61684550	(187271872)	+	Charlie2a	DNA/hAT-Charlie	2	339	(2522)	118587
70	0.0	0.0	0.0	chr1	63678340	63678401	(185278021)	+	(CTGC)n	Simple_repeat	1	62	(0)	122467
497	26.3	13.8	7.4	chr1	63678430	63678671	(185277751)	C	L2c	LINE/L2	(36)	3351	3092	122468
294	25.4	13.4	2.6	chr1	64209319	64209431	(184746991)	+	LTR79	LTR/ERVL	80	206	(321)	123481
263	25.9	14.0	9.1	chr1	65255156	65255628	(183700794)	C	L2c	LINE/L2	(0)	3387	2818	125434
201	32.0	2.0	2.0	chr1	65255641	65255739	(183700683)	+	L2a	LINE/L2	3052	3150	(225)	125435
11	18.6	0.0	7.1	chr1	65420513	65420554	(183535868)	+	G-rich	Low_complexity	1	42	(0)	125759
26	10.3	0.0	0.0	chr1	67604895	67604937	(181351485)	+	(TGCC)n	Simple_repeat	1	43	(0)	129238
16	8.6	4.9	4.7	chr1	67605061	67605101	(181351321)	+	(AGACAG)n	Simple_repeat	1	43	(0)	129239
526	27.0	9.5	2.4	chr1	69705145	69705349	(179251073)	C	MLT1I	LTR/ERVL-MaLR	(29)	382	162	132352
1459	22.7	9.8	2.1	chr1	69705428	69705850	(179250572)	C	MER65C	LTR/ERV1	(0)	461	3	132353
11884	18.9	3.4	2.4	chr1	75034418	75036366	(173920056)	+	L1MA1	LINE/L1	379	2352	(5213)	139469
11181	12.5	2.6	0.8	chr1	75036366	75039879	(173916543)	+	L1PA10	LINE/L1	4	3548	(2913)	139471
3541	13.8	3.7	3.7	chr1	76100848	76101523	(172854899)	C	L1MC1	LINE/L1	(0)	6333	5658	140943
12	20.6	1.7	8.3	chr1	77281880	77281938	(171674484)	+	(GCGCG)n	Simple_repeat	1	60	(0)	142615
599	11.1	0.0	0.0	chr1	77779898	77779987	(171176435)	+	5S	rRNA	1	90	(31)	143484
1058	27.9	10.1	4.4	chr1	83739951	83740597	(165215825)	+	L2a	LINE/L2	2693	3403	(23)	151584
461	22.4	7.1	6.5	chr1	84573948	84574100	(164382322)	+	MIRb	SINE/MIR	1	154	(114)	152737
278	22.2	4.0	0.0	chr1	85521521	85521592	(163434830)	+	Chap1_Mam	DNA/hAT-Charlie	13	87	(255)	154290
441	34.2	7.7	8.0	chr1	85521596	85521965	(163434457)	+	L2c	LINE/L2	3003	3387	(0)	154291
2658	11.1	2.7	0.0	chr1	86461466	86461862	(162494560)	C	MER61E	LTR/ERV1	(161)	408	1	155637
721	17.1	4.2	1.2	chr1	86461863	86462021	(162494401)	C	LTR49	LTR/ERV1	(16)	579	416	155638
231	10.0	2.4	0.0	chr1	86462016	86462055	(162494367)	C	LTR29	LTR/ERV1	(198)	424	384	155639
30	7.5	6.7	3.1	chr1	86462056	86462115	(162494307)	+	(AT)n	Simple_repeat	1	64	(0)	155640
11	20.8	0.0	2.9	chr1	89633168	89633202	(159323220)	+	(CGCGGC)n	Simple_repeat	1	35	(0)	160109
238	30.3	17.0	0.0	chr1	89922571	89922692	(159033730)	C	MIRb	SINE/MIR	(8)	260	114	160553
621	16.2	0.0	0.0	chr1	89922853	89922957	(159033465)	C	L1MB8	LINE/L1	(2)	6176	6072	160554
1258	30.4	18.5	3.0	chr1	91508780	91509947	(157446475)	+	L2a	LINE/L2	1743	3131	(295)	162825
1883	18.9	5.6	1.6	chr1	92137829	92138270	(156818152)	C	MER65C	LTR/ERV1	(0)	461	1	163963
1473	11.8	7.6	6.0	chr1	92138271	92138443	(156817979)	C	Tigger4	DNA/TcMar-Tigger	(158)	2573	2470	163962
685	20.6	6.8	2.9	chr1	93597484	93597653	(155358769)	+	MIR	SINE/MIR	65	241	(21)	166544
15	13.9	0.0	0.0	chr1	93652637	93652660	(155303762)	+	(T)n	Simple_repeat	1	24	(0)	166620
866	25.6	27.5	1.7	chr1	102494645	102495057	(146461365)	+	L1MEc	LINE/L1	1384	1903	(4584)	179371
13	22.6	2.3	2.2	chr1	102495267	102495310	(146461112)	+	(CACCTTT)n	Simple_repeat	1	45	(0)	179378
228	14.6	15.4	1.8	chr1	102495345	102495400	(146461022)	+	MER51A	LTR/ERV1	216	280	(354)	179379
1066	24.8	4.3	2.3	chr1	102495379	102495721	(146460701)	+	LTR25	LTR/ERV1	468	817	(27)	179380
579	33.7	7.1	7.4	chr1	102941095	102941937	(146014485)	+	L2c	LINE/L2	2526	3371	(16)	179921
1767	16.7	7.4	2.9	chr1	103589196	103589541	(145366881)	C	THE1B	LTR/ERVL-MaLR	(1)	363	1	180720
1192	16.4	0.0	5.9	chr1	103589544	103589763	(145366659)	C	MER61E	LTR/ERV1	(362)	207	1	180721
13165	17.3	2.9	3.4	chr1	103589770	103590331	(145366091)	C	MER61-int	LTR/ERV1	(1227)	3990	3714	180721
12265	11.5	1.6	0.6	chr1	104586070	104587917	(144368505)	+	L1PA7	LINE/L1	1	1850	(4633)	181854
232	31.8	17.3	0.6	chr1	107903714	107904026	(141052396)	+	L2	LINE/L2	2400	2775	(644)	186051
291	31.6	7.6	4.5	chr1	109242471	109242902	(139713520)	+	L2c	LINE/L2	2665	3136	(251)	188290
2443	9.2	0.3	0.0	chr1	109242903	109243207	(139713215)	C	AluSp	SINE/Alu	(7)	306	1	188291
260	26.7	6.5	14.8	chr1	109283698	109283899	(139672523)	+	MIRb	SINE/MIR	5	188	(80)	188334
3912	10.6	3.4	2.3	chr1	111214269	111214827	(137741595)	C	MER61E	LTR/ERV1	(4)	565	1	191252
18	0.0	0.0	0.0	chr1	111214863	111214882	(137741540)	+	(A)n	Simple_repeat	1	20	(0)	191253
3213	10.9	2.6	0.2	chr1	112826180	112826631	(136129791)	+	LTR2	LTR/ERV1	1	463	(0)	193844
6726	7.9	1.5	0.0	chr1	112826632	112827533	(136128889)	+	Harlequin-int	LTR/ERV1	1	916	(5980)	193844
225	34.7	12.7	3.9	chr1	112885886	112886147	(136070275)	+	L2c	LINE/L2	2552	2851	(568)	193984
2024	14.7	1.3	0.0	chr1	112944995	112945294	(136011128)	C	AluSx1	SINE/Alu	(8)	304	1	194108
2557	7.2	0.0	0.0	chr1	112945393	112945698	(136010724)	+	AluSx1	SINE/Alu	1	306	(6)	194109
2883	1.0	0.0	0.0	chr1	114500909	114501215	(134455207)	+	AluYa5	SINE/Alu	1	307	(4)	196705
2048	24.6	4.2	3.1	chr1	114501216	114501656	(134454766)	C	MLT1F	LTR/ERVL-MaLR	(102)	446	1	196704
1733	23.1	6.7	10.4	chr1	115036804	115037516	(133918906)	C	MER61E	LTR/ERV1	(30)	749	1	197610
198	30.7	15.4	6.9	chr1	116284892	116285336	(132671086)	+	L2c	LINE/L2	2894	3383	(4)	199454
193	33.7	6.1	5.1	chr1	116413371	116413622	(132542800)	C	L2a	LINE/L2	(5)	3421	3130	199648
391	23.5	3.5	5.1	chr1	116413744	116413765	(132542657)	C	L1ME5	LINE/L1	(103)	6091	6070	199649
591	18.3	2.8	0.0	chr1	116413766	116413869	(132542553)	C	U6	snRNA	(0)	107	1	199650
391	23.5	3.5	5.1	chr1	116413870	116414021	(132542401)	C	L1ME5	LINE/L1	(125)	6069	5920	199649
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
300	32.8	1.6	1.6	chr1	144412020	144412143	(104544279)	+	Charlie4a	DNA/hAT-Charlie	381	504	(4)	209360
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
309	32.8	1.6	1.6	chr1	145280554	145280677	(103675745)	+	Charlie4a	DNA/hAT-Charlie	381	504	(4)	210762
449	35.1	6.0	6.6	chr1	145541050	145541351	(103415071)	C	L2c	LINE/L2	(0)	3387	3088	211139
285	23.6	4.0	0.0	chr1	145541423	145541494	(103414928)	C	Chap1_Mam	DNA/hAT-Charlie	(255)	87	13	211140
290	35.5	0.7	2.9	chr1	147585765	147585903	(101370519)	C	MIRc	SINE/MIR	(45)	223	88	214345
202	36.8	5.4	1.0	chr1	147586175	147586369	(101370053)	+	L2c	LINE/L2	2555	2758	(661)	214346
303	32.8	1.6	1.6	chr1	148522036	148522159	(100434263)	+	Charlie4a	DNA/hAT-Charlie	381	504	(4)	215836
884	22.1	4.4	11.9	chr1	151351949	151352269	(97604153)	C	LTR25	LTR/ERV1	(119)	725	413	221021
236	10.0	16.7	4.8	chr1	151352242	151352304	(97604118)	C	MER51A	LTR/ERV1	(355)	279	208	221024
525	15.1	6.0	0.7	chr1	151352423	151352558	(97603864)	C	MER61E	LTR/ERV1	(452)	142	1	221025
2116	14.4	0.0	0.3	chr1	151352619	151352916	(97603506)	C	AluSz	SINE/Alu	(13)	299	3	221026
523	21.8	0.0	2.4	chr1	151495127	151495253	(97461169)	+	L1MA9	LINE/L1	6183	6306	(6)	221341
1077	20.8	13.5	1.7	chr1	153783162	153783460	(95172962)	+	MER58B	DNA/hAT-Charlie	1	340	(1)	224751
17	14.3	4.9	6.2	chr1	153963672	153963732	(94992690)	+	(GAGCGG)n	Simple_repeat	1	64	(0)	225138
321	6.4	8.1	1.1	chr1	154713961	154714648	(94241774)	+	(GT)n	Simple_repeat	1	744	(0)	226654
13	18.9	2.8	0.0	chr1	158113627	158113662	(90842760)	+	(GGCGCG)n	Simple_repeat	1	37	(0)	232694
197	26.3	3.4	1.7	chr1	158113986	158114043	(90842379)	C	L2b	LINE/L2	(52)	3335	3261	232695
1258	4.5	0.0	0.0	chr1	161153495	161153649	(87802773)	+	L1PA6	LINE/L1	6000	6154	(0)	236989
531	23.1	10.7	11.5	chr1	162002891	162003125	(86953297)	C	MIRb	SINE/MIR	(16)	252	20	238441
113	18.6	0.0	1.7	chr1	164663133	164663309	(84293113)	+	(CCTT)n	Simple_repeat	1	204	(28)	242462
18	6.7	9.4	0.0	chr1	164663310	164663341	(84293081)	+	(CT)n	Simple_repeat	1	35	(0)	242463
113	18.6	0.0	1.7	chr1	164663342	164663364	(84293058)	+	(CCTT)n	Simple_repeat	205	232	(0)	242462
2624	7.1	0.0	0.0	chr1	166281004	166281313	(82675109)	+	AluY	SINE/Alu	2	311	(0)	245042
340	27.2	9.9	5.5	chr1	167819103	167819247	(81137175)	C	MARNA	DNA/TcMar-Mariner	(89)	497	353	247364
2116	10.3	4.3	0.3	chr1	167819248	167819538	(81136884)	C	AluSq2	SINE/Alu	(10)	303	1	247365
1804	29.0	4.4	2.0	chr1	168523850	168524328	(80432094)	+	L1MEd	LINE/L1	981	1464	(5639)	248530
1740	16.5	11.0	1.6	chr1	168524329	168524512	(80431910)	C	MSTA	LTR/ERVL-MaLR	(0)	428	223	248533
34	0.0	0.0	0.0	chr1	168524513	168524541	(80431881)	+	(GA)n	Simple_repeat	1	29	(0)	248534
1740	16.5	11.0	1.6	chr1	168524542	168524743	(80431679)	C	MSTA	LTR/ERVL-MaLR	(206)	222	1	248533
1804	29.0	4.4	2.0	chr1	168524744	168525199	(80431223)	+	L1MEd	LINE/L1	1465	1939	(5164)	248530
30	4.9	9.5	0.0	chr1	170583363	170583425	(78372997)	+	(CAGG)n	Simple_repeat	1	69	(0)	251507
1359	25.2	2.4	7.4	chr1	175720070	175720459	(73235963)	+	MLT1A	LTR/ERVL-MaLR	1	370	(4)	259100
249	30.7	12.9	0.0	chr1	178047263	178047363	(70909059)	+	L2b	LINE/L2	3242	3357	(18)	262483
245	29.6	7.7	6.6	chr1	178047446	178047626	(70908796)	C	Tigger15a	DNA/TcMar-Tigger	(159)	556	374	262484
452	29.6	9.6	6.1	chr1	179784308	179784519	(69171903)	+	MIR	SINE/MIR	19	238	(24)	265298
21	16.0	1.6	6.2	chr1	180229723	180229785	(68726637)	+	(GCCCC)n	Simple_repeat	1	64	(0)	266082
19	11.7	2.7	0.0	chr1	180229938	180229975	(68726447)	+	(GGCGGA)n	Simple_repeat	1	39	(0)	266083
22	15.5	0.0	0.0	chr1	180229990	180230032	(68726390)	+	(GCCCC)n	Simple_repeat	1	43	(0)	266084
21	6.7	0.0	0.0	chr1	180779698	180779729	(68176693)	+	(GAGAGG)n	Simple_repeat	1	32	(0)	266946
4298	14.4	6.9	1.0	chr1	180779742	180780548	(68175874)	C	L1MB7	LINE/L1	(64)	6120	5263	266944
1473	21.2	10.3	2.6	chr1	181170580	181171001	(67785421)	+	MLT1C	LTR/ERVL-MaLR	10	467	(0)	267593
214	32.4	5.6	9.8	chr1	181171038	181171105	(67785317)	C	MIR1_Amn	SINE/MIR	(14)	216	165	267594
3568	14.5	6.2	6.7	chr1	181171106	181171836	(67784586)	C	LTR8A	LTR/ERV1	(0)	727	1	267595
3492	10.3	0.0	0.0	chr1	182761291	182761744	(66194678)	C	MER61E	LTR/ERV1	(115)	454	1	270012
526	30.6	3.5	3.0	chr1	182761771	182761969	(66194453)	C	MamRep137	DNA/TcMar-Tigger	(242)	268	69	270013
1167	30.5	14.0	4.9	chr1	183673203	183673692	(65282730)	C	L1MEd	LINE/L1	(6459)	627	59	271494
2043	14.5	0.0	3.7	chr1	185175204	185175527	(63780895)	C	AluJb	SINE/Alu	(0)	312	1	273860
1942	17.3	1.3	0.0	chr1	185176008	185176314	(63780108)	+	AluJr	SINE/Alu	1	311	(1)	273861
196	33.0	5.7	9.9	chr1	185449339	185449540	(63506882)	C	L2c	LINE/L2	(0)	3387	3195	274278
954	33.5	12.0	5.2	chr1	186769214	186770652	(62185770)	+	L2	LINE/L2	890	2438	(981)	276069
6515	18.4	6.5	1.2	chr1	193926946	193928140	(55028282)	C	LTR2752	LTR/ERV1	(0)	1263	1	285488
877	31.1	5.2	5.5	chr1	197560232	197560632	(51395790)	C	L2a	LINE/L2	(6)	3420	3021	290082
3279	26.0	13.6	3.5	chr1	197560636	197561998	(51394424)	+	L2a	LINE/L2	1249	2771	(648)	290083
13	36.7	0.0	0.0	chr1	199776646	199776703	(49179719)	+	(TCTC)n	Simple_repeat	1	58	(0)	292976
450	27.0	0.9	7.3	chr1	199776721	199776844	(49179578)	+	MER91A	DNA/hAT-Tip100	64	179	(17)	292977
85	19.3	0.6	0.0	chr1	199776858	199777028	(49179394)	+	(CTTC)n	Simple_repeat	1	172	(0)	292978
304	37.8	9.1	1.7	chr1	199777056	199777351	(49179071)	C	L2c	LINE/L2	(44)	3343	3024	292972
1293	17.3	2.5	0.5	chr1	200487655	200487851	(48468571)	+	AluJb	SINE/Alu	87	287	(25)	294354
16	5.2	0.0	0.0	chr1	200487852	200487871	(48468551)	+	(GA)n	Simple_repeat	1	20	(0)	294355
28	0.0	0.0	0.0	chr1	200487873	200487899	(48468523)	+	(G)n	Simple_repeat	1	27	(0)	294356
39	2.7	0.0	0.0	chr1	200487903	200487940	(48468482)	+	(GA)n	Simple_repeat	1	38	(0)	294357
479	27.2	12.9	5.7	chr1	200487956	200488023	(48468399)	C	L2a	LINE/L2	(142)	3284	3217	294352
12	20.3	6.7	0.0	chr1	201947123	201947167	(47009255)	+	(AGATAG)n	Simple_repeat	1	48	(0)	296897
53	2.0	0.0	0.0	chr1	201947176	201947225	(47009197)	+	(GA)n	Simple_repeat	1	50	(0)	296898
23	16.8	0.0	8.3	chr1	204494845	204494916	(44461506)	+	(CCTCC)n	Simple_repeat	1	72	(0)	301631
33	0.0	0.0	0.0	chr1	205319925	205319952	(43636470)	+	(AC)n	Simple_repeat	1	28	(0)	303208
404	26.0	0.8	5.8	chr1	205320022	205320160	(43636262)	+	MER5A	DNA/hAT-Charlie	55	186	(3)	303209
1074	25.2	3.0	1.8	chr1	207968132	207968466	(40987956)	C	L1M5	LINE/L1	(1769)	4377	4039	307401
751	19.7	0.0	0.0	chr1	207968581	207968712	(40987710)	+	FLAM_A	SINE/Alu	1	132	(10)	307402
16	17.8	2.1	4.1	chr1	207968940	207968961	(40987461)	+	(CTCTGT)n	Simple_repeat	1	48	(0)	307403
20	4.1	0.0	0.0	chr1	207968962	207968986	(40987436)	+	(TC)n	Simple_repeat	1	25	(0)	307404
2043	20.8	1.5	1.3	chr1	209239261	209239718	(39716704)	+	MER65C	LTR/ERV1	3	461	(0)	309351
2083	13.6	1.9	1.3	chr1	209875036	209875343	(39081079)	+	AluJb	SINE/Alu	3	312	(0)	310317
3935	11.0	1.9	2.3	chr1	210280364	210280930	(38675492)	+	MER61E	LTR/ERV1	1	565	(4)	310902
2495	10.7	0.0	0.0	chr1	212330886	212331185	(36625237)	+	AluSx1	SINE/Alu	1	300	(12)	314344
1693	17.5	0.4	3.4	chr1	212331201	212331468	(36624954)	C	AluJr	SINE/Alu	(52)	260	1	314345
22	20.9	0.0	0.0	chr1	212567134	212567174	(36389248)	+	(T)n	Simple_repeat	1	41	(0)	314770
1666	21.5	5.4	1.8	chr1	216526197	216526646	(32429776)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	320469
180	35.6	1.4	0.0	chr1	216526662	216526734	(32429688)	+	MIR3	SINE/MIR	127	200	(8)	320470
478	32.3	2.6	2.6	chr1	216526794	216526984	(32429438)	+	MIR3	SINE/MIR	18	208	(0)	320471
23	15.5	2.2	0.0	chr1	220300500	220300544	(28655878)	+	(AGC)n	Simple_repeat	1	46	(0)	326003
794	17.1	0.8	0.0	chr1	222591593	222591721	(26364701)	+	FLAM_A	SINE/Alu	4	133	(9)	329392
249	30.6	6.1	0.9	chr1	222591746	222591854	(26364568)	+	HAL1b	LINE/L1	781	895	(1526)	329393
2091	14.1	0.3	1.0	chr1	223880539	223880846	(25075576)	C	MER1B	DNA/hAT-Charlie	(0)	339	34	331370
776	23.1	20.9	3.7	chr1	223880849	223881303	(25075119)	+	L1MC5	LINE/L1	8742	9295	(9)	331369
180	14.3	5.4	0.0	chr1	225509582	225509616	(23446806)	+	AmnSINE1	SINE/5S-Deu-L2	346	382	(193)	334076
1758	14.0	5.5	0.4	chr1	225809562	225809839	(23146583)	+	AluJo	SINE/Alu	2	294	(18)	334624
800	22.9	3.4	3.8	chr1	225809840	225809942	(23146480)	C	MER5C	DNA/hAT-Charlie	(128)	185	79	334623
12	11.5	4.7	6.7	chr1	227780277	227780319	(21176103)	+	(AGGCAGG)n	Simple_repeat	1	45	(0)	337878
3235	13.0	4.1	0.2	chr1	229209704	229210196	(19746226)	C	LTR64	LTR/ERV1	(14)	514	2	339857
269	25.5	5.8	5.8	chr1	229210259	229210362	(19746060)	C	MIR3	SINE/MIR	(19)	189	86	339858
399	34.6	9.2	0.9	chr1	229587189	229587526	(19368896)	+	L2c	LINE/L2	2463	2831	(588)	340568
61	4.1	0.0	3.7	chr1	229587618	229587699	(19368723)	+	(CCTT)n	Simple_repeat	1	82	(0)	340569
1862	14.6	0.7	3.7	chr1	229587715	229588008	(19368414)	C	AluJb	SINE/Alu	(17)	295	11	340570
26	16.8	2.8	4.0	chr1	229825207	229825278	(19131144)	+	(AATA)n	Simple_repeat	1	74	(0)	340976
732	20.8	2.0	0.7	chr1	229825359	229825508	(19130914)	+	MER101-int	LTR/ERV1	856	1007	(5632)	340974
483	35.0	6.2	4.8	chr1	230416595	230417008	(18539414)	C	L2	LINE/L2	(352)	3067	2648	341832
2014	13.5	0.5	13.3	chr1	230871831	230872065	(18084357)	+	MSTC	LTR/ERVL-MaLR	1	190	(238)	342534
2237	9.6	0.0	0.0	chr1	230872066	230872382	(18084040)	C	AluSc8	SINE/Alu	(0)	311	1	342535
125	10.1	3.7	2.8	chr1	231762068	231762297	(17194125)	+	(TTTTC)n	Simple_repeat	1	232	(0)	344028
29	4.9	0.0	4.3	chr1	231762298	231762343	(17194079)	+	(CCTTCCTG)n	Simple_repeat	1	46	(0)	344029
125	10.1	3.7	2.8	chr1	231762344	231762353	(17194069)	+	(TTTTC)n	Simple_repeat	3	12	(0)	344030
1623	16.4	0.0	5.6	chr1	231762364	231762650	(17193772)	C	AluJo	SINE/Alu	(41)	271	1	344031
599	33.6	1.7	4.2	chr1	233243757	233243822	(15712600)	C	MIRb	SINE/MIR	(8)	260	195	346089
2366	10.1	0.7	0.0	chr1	233243823	233244128	(15712294)	C	AluSx3	SINE/Alu	(3)	308	1	346090
509	25.8	11.7	8.3	chr1	233332106	233332418	(15624004)	C	L2a	LINE/L2	(4)	3422	3098	346220
2312	11.3	0.0	0.0	chr1	234631169	234631470	(14324952)	+	AluY	SINE/Alu	1	302	(9)	348198
12	20.7	0.0	2.9	chr1	234631574	234631608	(14324814)	+	(TTTG)n	Simple_repeat	1	35	(0)	348199
35	25.3	1.0	2.0	chr1	234724082	234724179	(14232243)	+	GA-rich	Low_complexity	1	99	(0)	348335
559	29.3	1.9	4.7	chr1	234781964	234782178	(14174244)	+	MamRep1879	DNA/hAT-Tip100?	8	216	(0)	348428
885	23.4	1.4	1.9	chr1	234782180	234782388	(14174034)	+	MIRb	SINE/MIR	55	262	(6)	348429
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
1994	23.8	10.5	8.2	chr1	236654014	236654801	(12301621)	C	MER21C	LTR/ERVL	(17)	921	114	352035
127	6.2	0.0	0.0	chr1	236654806	236654956	(12301466)	+	(CCTTCCTG)n	Simple_repeat	1	151	(0)	352036
1501	14.7	0.5	0.0	chr1	236654957	236655180	(12301242)	C	AluJr	SINE/Alu	(6)	306	82	352037
1694	30.9	9.6	4.2	chr1	236741338	236742369	(12214053)	+	L2a	LINE/L2	2312	3416	(10)	352181
2622	20.2	5.0	5.1	chr1	237470692	237471420	(11485002)	C	LTR9A1	LTR/ERV1	(0)	728	1	353369
16486	10.6	1.1	1.4	chr1	238900169	238903678	(10052744)	+	L1PA3	LINE/L1	1424	5944	(1621)	355350
2359	18.3	1.5	0.4	chr1	239977755	239978210	(8978212)	C	MER65C	LTR/ERV1	(0)	461	1	356940
1028	27.2	8.9	2.4	chr1	239978211	239978344	(8978078)	+	MLT1J2	LTR/ERVL-MaLR	263	404	(44)	356939
1950	20.8	0.8	5.8	chr1	242202943	242203418	(6753004)	+	MER89	LTR/ERV1	2	517	(42)	360619
2414	15.4	5.4	0.2	chr1	242203419	242203822	(6752600)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	360620
1950	21.0	0.2	7.2	chr1	242203823	242203869	(6752553)	+	MER89	LTR/ERV1	518	559	(0)	360619
12	19.7	3.9	3.8	chr10	548409	548437	(133248985)	+	(GGCA)n	Simple_repeat	1	29	(0)	371620
27	3.4	0.0	0.0	chr10	548438	548467	(133248955)	+	(GGGA)n	Simple_repeat	1	30	(0)	371621
12	19.7	3.9	3.8	chr10	548468	548488	(133248934)	+	(GGCA)n	Simple_repeat	2	22	(0)	371622
12	19.2	2.1	6.2	chr10	548506	548519	(133248903)	+	GA-rich	Low_complexity	1	14	(0)	371623
27	0.0	0.0	0.0	chr10	548520	548545	(133248877)	+	(AGGC)n	Simple_repeat	1	26	(0)	371624
12	19.2	2.1	6.2	chr10	548546	548577	(133248845)	+	GA-rich	Low_complexity	15	45	(0)	371625
400	30.4	13.5	1.1	chr10	787072	787331	(133010091)	+	MLT1A	LTR/ERVL-MaLR	26	322	(52)	371845
2397	8.2	0.0	0.0	chr10	3528641	3528934	(130268488)	C	AluSg	SINE/Alu	(16)	294	1	375208
2107	11.8	0.3	4.8	chr10	5873329	5873473	(127923949)	C	AluSz	SINE/Alu	(177)	135	1	378484
297	21.1	3.8	0.0	chr10	5873504	5873579	(127923843)	+	L1ME4a	LINE/L1	6000	6078	(46)	378486
209	34.8	3.2	2.1	chr10	6109233	6109326	(127688096)	C	L3b	LINE/CR1	(10)	5222	5128	378904
334	29.2	0.0	1.1	chr10	7494260	7494349	(126303073)	+	L2a	LINE/L2	3338	3426	(0)	381117
2759	10.5	1.8	0.8	chr10	7512158	7512542	(126284880)	C	MER1A	DNA/hAT-Charlie	(0)	529	141	381145
914	16.2	5.5	0.7	chr10	7512666	7512820	(126284602)	C	MER1A	DNA/hAT-Charlie	(366)	163	1	381146
196	20.4	15.5	0.0	chr10	13725167	13725215	(120072207)	C	MIR3	SINE/MIR	(44)	164	107	391252
1802	17.7	0.0	2.4	chr10	16011335	16011622	(117785800)	+	AluJo	SINE/Alu	1	281	(31)	395129
274	26.2	1.2	1.2	chr10	16011720	16011800	(117785622)	+	LTR85b	LTR/Gypsy?	703	783	(1)	395130
277	35.4	7.3	3.8	chr10	16011961	16012145	(117785277)	+	L3	LINE/CR1	3877	4068	(31)	395131
1620	18.1	0.0	8.7	chr10	17246946	17247277	(116550145)	+	AluJb	SINE/Alu	9	311	(1)	397033
521	28.2	6.6	10.4	chr10	17247278	17247300	(116550122)	+	L1M5	LINE/L1	3897	3927	(2219)	397031
3869	12.6	1.6	2.3	chr10	17247301	17247868	(116549554)	+	MER61E	LTR/ERV1	2	565	(4)	397034
2099	21.8	2.3	1.4	chr10	17534793	17535225	(116262197)	C	MER65C	LTR/ERV1	(24)	437	1	397571
534	32.2	6.7	1.4	chr10	17550211	17550421	(116247001)	C	MIRb	SINE/MIR	(17)	251	29	397608
2774	15.5	4.5	2.5	chr10	17550424	17550717	(116246705)	C	MER66B	LTR/ERV1	(0)	486	202	397609
2234	11.7	0.7	0.0	chr10	17550718	17551024	(116246398)	+	AluSx	SINE/Alu	1	309	(3)	397610
1650	15.4	4.3	2.2	chr10	18188333	18188604	(115608818)	C	AluJo	SINE/Alu	(34)	278	1	398664
26	14.9	3.3	1.6	chr10	19816105	19816165	(113981257)	+	G-rich	Low_complexity	1	63	(0)	401152
18	23.8	0.0	0.0	chr10	19816365	19816401	(113981021)	+	(T)n	Simple_repeat	1	37	(0)	401153
1604	19.5	6.0	1.4	chr10	20697100	20697447	(113099975)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	402392
2396	9.7	1.0	0.0	chr10	27195921	27196210	(106601212)	+	AluSp	SINE/Alu	1	293	(20)	413045
236	25.7	12.4	6.6	chr10	27196426	27196546	(106600876)	C	MIR	SINE/MIR	(77)	185	57	413046
198	31.9	5.0	12.0	chr10	28986763	28986813	(104810609)	C	MIRc	SINE/MIR	(65)	203	164	416080
844	16.7	0.8	0.0	chr10	28986814	28986945	(104810477)	C	FLAM_C	SINE/Alu	(9)	134	2	416081
231	31.9	5.0	12.0	chr10	28986946	28987110	(104810312)	C	MIR1_Amn	SINE/MIR	(61)	169	3	416080
1621	19.6	0.7	3.1	chr10	29431251	29431536	(104365886)	C	AluJr	SINE/Alu	(33)	279	1	416883
251	29.4	1.4	0.0	chr10	32446709	32446776	(101350646)	+	MIR	SINE/MIR	147	215	(47)	422004
17	0.0	0.0	0.0	chr10	32446883	32446904	(101350518)	+	(TGCC)n	Simple_repeat	1	22	(0)	422005
47	6.2	1.4	2.7	chr10	32446905	32446977	(101350445)	+	(CCTC)n	Simple_repeat	1	74	(0)	422006
848	28.6	9.7	3.2	chr10	32447011	32447415	(101350007)	+	L2	LINE/L2	1764	2197	(1222)	422007
370	28.0	4.1	0.8	chr10	43350277	43350395	(90447027)	+	MIR	SINE/MIR	21	143	(119)	433308
751	16.5	1.6	2.4	chr10	43350425	43350551	(90446871)	+	FLAM_C	SINE/Alu	1	126	(17)	433309
12	16.5	0.0	0.0	chr10	50568331	50568357	(83229065)	+	GA-rich	Low_complexity	1	27	(0)	443556
741	16.9	0.8	0.0	chr10	50568563	50568680	(83228742)	+	FLAM_A	SINE/Alu	5	123	(19)	443557
3307	13.8	1.6	6.5	chr10	51766029	51766616	(82030806)	C	MER61E	LTR/ERV1	(4)	565	7	445354
766	23.6	0.6	4.4	chr10	51766618	51766799	(82030623)	C	MLT1A	LTR/ERVL-MaLR	(176)	198	24	445353
598	12.5	17.0	0.0	chr10	52326521	52326632	(81470790)	+	MLT1J1	LTR/ERVL-MaLR	1	135	(309)	446119
389	26.3	10.7	0.0	chr10	52326704	52326836	(81470586)	+	MLT1J1	LTR/ERVL-MaLR	251	399	(45)	446119
19	17.2	0.0	0.0	chr10	52326840	52326872	(81470550)	+	(T)n	Simple_repeat	1	33	(0)	446120
2284	11.2	0.7	0.0	chr10	52400276	52400579	(81396843)	+	AluSx	SINE/Alu	1	306	(6)	446230
2249	17.8	1.3	5.6	chr10	52400580	52400883	(81396539)	C	MER65C	LTR/ERV1	(159)	302	1	446229
421	37.0	8.6	7.3	chr10	52400884	52401074	(81396348)	+	L3	LINE/CR1	3891	4079	(20)	446227
2132	18.4	7.7	6.0	chr10	61043079	61043611	(72753811)	C	MER67A	LTR/ERV1	(0)	543	1	457992
11	22.5	3.5	5.1	chr10	63521661	63521717	(70275705)	+	(GGCCTG)n	Simple_repeat	1	59	(0)	461938
29	22.2	5.7	3.8	chr10	63521784	63521907	(70275515)	+	(GCG)n	Simple_repeat	1	131	(0)	461939
2723	6.4	0.0	0.3	chr10	63871828	63872139	(69925283)	+	AluY	SINE/Alu	1	311	(0)	462546
6811	22.8	5.4	2.1	chr10	64222947	64226288	(69571134)	+	L1MA5	LINE/L1	423	4465	(3097)	463066
2010	14.8	0.3	1.1	chr10	67801880	67802162	(65995260)	C	AluJo	SINE/Alu	(30)	282	2	467918
1533	19.8	2.6	4.3	chr10	67802248	67802668	(65994754)	+	MER65C	LTR/ERV1	1	461	(0)	467919
20	19.5	1.8	3.5	chr10	68205299	68205355	(65592067)	+	(ATTT)n	Simple_repeat	1	58	(0)	468713
2017	14.2	0.0	2.6	chr10	68205397	68205699	(65591723)	+	AluSx1	SINE/Alu	1	295	(17)	468714
12	0.0	4.3	4.2	chr10	69123850	69123872	(64673550)	+	(TCCT)n	Simple_repeat	1	24	(0)	470925
424	26.9	8.3	3.3	chr10	69844084	69844293	(63953129)	C	L2c	LINE/L2	(233)	3154	2935	472365
197	23.7	0.0	0.0	chr10	69844342	69844379	(63953043)	+	MIR	SINE/MIR	84	121	(141)	472366
565	24.5	2.7	0.0	chr10	69844489	69844631	(63952791)	+	MIR	SINE/MIR	111	257	(5)	472366
3429	14.0	0.2	2.9	chr10	70629907	70630465	(63166957)	+	Tigger2	DNA/TcMar-Tigger	532	1075	(1643)	473848
9724	2.9	0.5	15.1	chr10	70630468	70632007	(63165415)	+	SVA_D	Retroposon/SVA	71	1384	(2)	473849
2468	18.0	2.6	0.7	chr10	70756459	70756910	(63040512)	C	MER65C	LTR/ERV1	(0)	461	1	474070
365	36.4	5.7	3.9	chr10	71503504	71504036	(62293386)	C	L2a	LINE/L2	(0)	3426	2883	475408
7232	26.2	0.6	1.3	chr10	71949455	71951421	(61846001)	C	HERVFH21-int	LTR/ERV1	(251)	8185	5462	476254
330	20.8	8.3	0.0	chr10	75085846	75085922	(58711500)	C	MLT1J	LTR/ERVL-MaLR	(5)	507	424	482394
23448	9.6	1.0	3.8	chr10	75575580	75581586	(58215836)	+	L1P2	LINE/L1	11	5977	(492)	483313
357	36.6	2.3	4.0	chr10	77306547	77306771	(56490651)	C	L2b	LINE/L2	(515)	2904	2684	485676
83	0.0	0.0	0.0	chr10	84297727	84297799	(49499623)	+	(GAAA)n	Simple_repeat	1	73	(0)	496640
67	8.9	0.0	7.9	chr10	84297800	84297939	(49499483)	+	GA-rich	Low_complexity	1	140	(0)	496641
332	24.6	8.3	0.8	chr10	84297972	84298094	(49499328)	C	L1ME4a	LINE/L1	(39)	6085	5953	496642
2157	11.6	1.3	1.7	chr10	85819627	85819927	(47977495)	+	AluSq2	SINE/Alu	1	300	(13)	498612
118	18.6	0.7	0.7	chr10	85819929	85820180	(47977242)	+	GA-rich	Low_complexity	1	252	(0)	498613
885	22.8	1.3	0.4	chr10	85820182	85820415	(47977007)	+	L1MD3	LINE/L1	7590	7825	(170)	498607
864	6.5	7.5	0.0	chr10	85820418	85820541	(47976881)	+	MER85	DNA/PiggyBac	6	139	(0)	498614
277	27.7	7.4	0.0	chr10	85820542	85820678	(47976744)	+	L1MD3	LINE/L1	7824	7971	(24)	498607
176	23.6	3.9	2.5	chr10	86594062	86594576	(47202846)	+	GA-rich	Low_complexity	30	552	(0)	499819
528	20.4	8.7	6.7	chr10	86594688	86594789	(47202633)	+	L1MB4	LINE/L1	5971	6081	(99)	499820
1535	9.6	5.2	0.0	chr10	86594790	86595007	(47202415)	+	MER30	DNA/hAT-Charlie	1	230	(0)	499821
528	20.4	8.7	6.7	chr10	86595008	86595083	(47202339)	+	L1MB4	LINE/L1	6082	6153	(27)	499820
15	11.1	0.0	3.2	chr10	86668844	86668874	(47128548)	+	(TGTC)n	Simple_repeat	1	31	(0)	499942
30	0.0	0.0	0.0	chr10	86669037	86669064	(47128358)	+	(CAGG)n	Simple_repeat	1	28	(0)	499943
3378	16.3	3.4	6.9	chr10	87197759	87198470	(46598952)	C	L1MB8	LINE/L1	(42)	6136	5451	500910
4000	25.0	9.2	12.2	chr10	87206931	87208183	(46589239)	+	L1MEg	LINE/L1	30	2433	(4900)	500932
186	23.7	0.0	0.0	chr10	89252186	89252223	(44545199)	+	MIRb	SINE/MIR	203	240	(28)	504103
758	28.6	2.8	5.1	chr10	91712660	91712762	(42084660)	+	MIRb	SINE/MIR	21	117	(151)	507743
712	26.4	7.0	5.0	chr10	93808819	93809057	(39988365)	C	MIRb	SINE/MIR	(0)	268	25	511835
2004	15.5	0.7	3.0	chr10	93809066	93809368	(39988054)	C	AluJo	SINE/Alu	(11)	301	6	511836
768	30.4	7.3	8.2	chr10	93809404	93809818	(39987604)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	1	511837
2892	13.3	2.0	4.8	chr10	94682599	94683114	(39114308)	C	MER61D	LTR/ERV1	(0)	622	1	513437
341	24.1	3.5	5.9	chr10	94683242	94683305	(39114117)	+	MER5B	DNA/hAT-Charlie	1	66	(112)	513438
1504	15.2	13.5	0.0	chr10	94683306	94683574	(39113848)	+	AluSq2	SINE/Alu	2	312	(1)	513439
686	27.7	9.4	0.5	chr10	95610554	95610767	(38186655)	+	MIR	SINE/MIR	26	260	(2)	514613
212	31.7	2.9	4.7	chr10	95610803	95610908	(38186514)	+	L2c	LINE/L2	3284	3387	(0)	514614
498	26.4	6.6	7.8	chr10	96090395	96090605	(37706817)	C	MIRb	SINE/MIR	(28)	240	37	515390
1061	25.2	7.1	0.9	chr10	96098146	96098578	(37698844)	C	L1M5	LINE/L1	(1591)	4555	4094	515403
2136	8.4	0.4	2.5	chr10	97037115	97037400	(36760022)	C	AluSp	SINE/Alu	(33)	280	1	517138
45	2.3	0.0	0.0	chr10	97840962	97841006	(35956416)	+	(CCCTCT)n	Simple_repeat	1	45	(0)	518856
8595	6.2	3.4	9.2	chr10	97841021	97842457	(35954965)	+	SVA_A	Retroposon/SVA	35	1385	(2)	518857
71	20.1	1.6	3.7	chr10	99340692	99340876	(34456546)	+	(TTCT)n	Simple_repeat	1	188	(0)	521303
39	0.0	0.0	0.0	chr10	99340877	99340912	(34456510)	+	(CCTG)n	Simple_repeat	1	36	(0)	521304
629	31.7	6.2	5.1	chr10	99340913	99341248	(34456174)	C	L2b	LINE/L2	(22)	3353	3014	521305
191	19.6	9.7	5.1	chr10	100009443	100009501	(33787921)	+	MIR3	SINE/MIR	131	192	(16)	522510
18	25.1	5.7	2.1	chr10	100009743	100009758	(33787664)	+	(CTCCGG)n	Simple_repeat	1	39	(54)	522511
19	13.9	1.9	5.6	chr10	100009759	100009811	(33787611)	+	(CCCCCG)n	Simple_repeat	1	54	(0)	522512
18	25.1	5.7	2.1	chr10	100009812	100009830	(33787592)	+	(CTCCGG)n	Simple_repeat	40	93	(0)	522511
12	21.2	2.1	4.2	chr10	100009959	100010005	(33787417)	+	(CCGCCT)n	Simple_repeat	1	48	(0)	522513
415	28.4	1.6	8.4	chr10	100899861	100900014	(32897408)	C	L1ME3G	LINE/L1	(319)	573	420	524145
48	29.6	4.0	1.4	chr10	101225064	101225263	(32572159)	+	(TC)n	Simple_repeat	1	208	(0)	524689
62	20.7	5.4	0.6	chr10	101229292	101229457	(32567965)	+	(TC)n	Simple_repeat	1	175	(0)	524695
315	29.5	4.3	1.8	chr10	101235791	101235904	(32561518)	C	L2c	LINE/L2	(239)	3148	3032	524705
6602	14.4	3.6	4.6	chr10	101414218	101415170	(32382252)	+	Tigger3b	DNA/TcMar-Tigger	1	943	(288)	525079
334	25.6	2.3	0.0	chr10	101588484	101588569	(32208853)	C	MIR3	SINE/MIR	(22)	186	99	525330
22	25.9	4.3	0.0	chr10	102117843	102117911	(31679511)	+	(TG)n	Simple_repeat	1	72	(0)	526327
19	14.1	2.6	0.0	chr10	102118013	102118051	(31679371)	+	(CAGG)n	Simple_repeat	1	40	(0)	526328
758	25.5	9.2	1.6	chr10	102220685	102221022	(31576400)	C	L1ME4c	LINE/L1	(382)	448	96	526536
230	21.8	0.0	0.5	chr10	102221027	102221073	(31576349)	C	L2a	LINE/L2	(11)	3415	3374	526537
217	21.3	4.1	0.0	chr10	102221587	102221633	(31575789)	C	L2a	LINE/L2	(584)	2835	2787	526537
1992	23.5	12.1	1.3	chr10	103068829	103069518	(30727904)	C	L1ME3A	LINE/L1	(3)	6170	5396	528181
3719	10.8	1.8	3.1	chr10	107585335	107585905	(26211517)	C	MER61E	LTR/ERV1	(4)	565	3	535458
1666	18.8	8.7	5.2	chr10	107585906	107586139	(26211283)	+	L1MA9	LINE/L1	5925	6188	(124)	535455
4772	5.4	0.2	0.3	chr10	107586140	107586731	(26210691)	+	LTR10C	LTR/ERV1	1	591	(0)	535459
1778	12.3	1.0	8.2	chr10	113073395	113073710	(20723712)	+	AluJo	SINE/Alu	11	303	(9)	543742
175	9.6	0.6	7.2	chr10	114149519	114149877	(19647545)	+	GA-rich	Low_complexity	1	361	(0)	545468
2179	26.7	8.0	5.4	chr10	114642317	114643333	(19154089)	+	HAL1b	LINE/L1	888	1933	(488)	546268
376	38.4	7.3	5.9	chr10	118140912	118141768	(15655654)	+	L2b	LINE/L2	2513	3380	(7)	551612
6019	18.8	2.5	22.4	chr10	118841994	118844198	(14953224)	+	MER52A	LTR/ERV1	1	1755	(0)	552713
471	32.4	8.4	0.5	chr10	120979163	120979348	(12818074)	+	MIRb	SINE/MIR	67	268	(0)	556458
298	27.9	10.8	0.0	chr10	120979385	120979524	(12817898)	C	MER5A1	DNA/hAT-Charlie	(4)	162	6	556459
394	27.6	6.5	11.8	chr10	121254481	121254842	(12542580)	+	L1ME3	LINE/L1	1516	1783	(5767)	556873
2250	26.9	11.9	6.1	chr10	121254820	121255590	(12541832)	+	L1ME3	LINE/L1	1573	2433	(5117)	556873
11	18.1	2.4	4.8	chr10	123288036	123288076	(10509346)	+	(TATGAT)n	Simple_repeat	1	42	(0)	560068
489	29.6	4.3	2.3	chr10	124060935	124061151	(9736271)	C	MIRb	SINE/MIR	(21)	247	19	561299
2844	6.3	1.1	0.0	chr10	124061190	124061540	(9735882)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	561300
30	4.8	2.3	0.0	chr10	124162980	124163023	(9634399)	+	(GGAG)n	Simple_repeat	1	45	(0)	561454
82	5.3	1.0	0.0	chr10	124163025	124163122	(9634300)	+	(AGGC)n	Simple_repeat	1	99	(0)	561455
287	23.1	8.1	0.0	chr10	124163193	124163283	(9634139)	C	L1ME4c	LINE/L1	(263)	567	469	561456
76	14.2	1.2	4.8	chr10	124163321	124163486	(9633936)	+	GA-rich	Low_complexity	1	168	(0)	561457
1559	8.0	3.6	0.8	chr10	132335099	132335338	(1462084)	C	LTR71B	LTR/ERV1	(2)	608	362	571547
3995	24.4	8.8	4.9	chr10	132756429	132757609	(1039813)	+	Tigger3b	DNA/TcMar-Tigger	1	1231	(0)	571936
272	29.4	2.7	4.7	chr10	132923816	132923965	(873457)	+	L1MEf	LINE/L1	1871	2017	(4183)	572048
24	20.8	3.9	7.5	chr10	132924167	132924294	(873128)	+	(CTGCCTG)n	Simple_repeat	1	133	(0)	572049
5146	12.2	4.7	2.4	chr10	132967129	132967946	(829476)	C	LTR1A2	LTR/ERV1	(0)	837	1	572090
685	24.9	2.1	13.2	chr10	132967947	132968108	(829314)	C	L1MEf	LINE/L1	(2906)	3240	3077	572087
13	12.0	0.0	3.5	chr10	133349008	133349036	(448386)	+	(CCCCA)n	Simple_repeat	1	29	(0)	572427
150	21.9	4.8	1.7	chr10	133349083	133349536	(447886)	+	(CA)n	Simple_repeat	1	476	(0)	572428
19	9.8	8.3	4.6	chr10	133349861	133349920	(447502)	+	G-rich	Low_complexity	1	65	(0)	572429
72	1.3	2.5	1.2	chr10	133373682	133373761	(423661)	+	(CTGCCCGC)n	Simple_repeat	1	82	(0)	572451
232	25.6	12.0	0.0	chr10	133373812	133373936	(423486)	+	Zaphod	DNA/hAT-Tip100	663	804	(3227)	572452
303	22.9	8.6	0.0	chr10	133373903	133373998	(423424)	+	Zaphod	DNA/hAT-Tip100	3918	4022	(9)	572453
1606	8.1	1.2	1.6	chr10	133374049	133374168	(423254)	C	MER51B	LTR/ERV1	(0)	377	257	572454
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
2543	6.6	1.9	0.0	chr11	912563	912867	(134173755)	+	AluY	SINE/Alu	1	311	(0)	574082
297	21.6	4.3	2.2	chr11	2938942	2939031	(132147591)	+	L1MB3	LINE/L1	6090	6181	(2)	576336
1900	17.1	0.3	0.3	chr11	2939400	2939698	(132146924)	+	AluSz	SINE/Alu	9	307	(5)	576338
37	2.6	0.0	0.0	chr11	3867843	3867881	(131218741)	+	(GGCA)n	Simple_repeat	1	39	(0)	577887
15	14.1	3.0	2.9	chr11	3868118	3868150	(131218472)	+	(GT)n	Simple_repeat	1	34	(0)	577888
16	17.5	0.0	0.0	chr11	4392985	4393017	(130693605)	+	(TGTA)n	Simple_repeat	1	33	(0)	578775
254	31.9	10.8	2.7	chr11	8290711	8290897	(126795725)	+	L2c	LINE/L2	3005	3208	(179)	583786
220	30.9	0.0	0.0	chr11	8290954	8291021	(126795601)	+	MIR3	SINE/MIR	87	159	(71)	583787
308	28.1	7.2	0.8	chr11	9733828	9733956	(125352666)	C	L1ME3D	LINE/L1	(0)	6242	6105	586458
524	35.9	2.7	8.8	chr11	10535964	10536363	(124550259)	C	L2b	LINE/L2	(46)	3329	2955	587686
926	31.8	15.1	2.3	chr11	10536364	10536617	(124550005)	+	L3	LINE/CR1	3158	3441	(658)	587687
763	12.5	2.2	9.7	chr11	10536618	10536761	(124549861)	C	AluJo	SINE/Alu	(179)	133	1	587688
8574	16.8	10.5	1.1	chr11	10543795	10545381	(124541241)	C	MER52A	LTR/ERV1	(0)	1755	1	587697
19	0.0	0.0	0.0	chr11	11842840	11842860	(123243762)	+	(T)n	Simple_repeat	1	21	(0)	589843
215	32.2	6.2	1.1	chr11	12761249	12761339	(122325283)	C	L3	LINE/CR1	(146)	3953	3858	591289
279	34.8	1.7	0.9	chr11	12761416	12761531	(122325091)	+	L3	LINE/CR1	3265	3381	(718)	591290
1956	28.2	17.6	1.7	chr11	17011268	17012726	(118073896)	+	L2a	LINE/L2	1666	3406	(20)	597886
739	32.6	10.7	4.0	chr11	17263728	17264060	(117822562)	C	L2a	LINE/L2	(594)	2825	2487	598432
1512	26.2	3.4	7.0	chr11	17264065	17264491	(117822131)	C	ERV3-16A3_LTR	LTR/ERVL	(11)	411	1	598435
3536	10.9	8.4	2.1	chr11	17369842	17370373	(117716249)	+	MER61E	LTR/ERV1	1	569	(0)	598650
14668	10.4	0.7	1.2	chr11	17377511	17378687	(117707935)	+	HUERS-P3-int	LTR/ERV1	7753	8919	(0)	598650
3879	12.1	1.6	2.6	chr11	17378688	17379258	(117707364)	+	MER61E	LTR/ERV1	1	565	(4)	598650
425	23.9	2.7	1.8	chr11	17569875	17569985	(117516637)	C	L4_B_Mam	LINE/RTE-X	(237)	4704	4593	598975
27	3.4	0.0	0.0	chr11	17570071	17570100	(117516522)	+	(GGCA)n	Simple_repeat	1	30	(0)	598976
197	23.9	5.6	0.0	chr11	17570461	17570527	(117516095)	+	MamTip2	DNA/hAT-Tip100	77	147	(158)	598977
94	3.1	0.0	1.9	chr11	27906407	27906511	(107180111)	+	(GAAA)n	Simple_repeat	1	105	(0)	614748
501	33.3	1.9	5.1	chr11	27906512	27906548	(107180074)	+	MLT1O	LTR/ERVL-MaLR	315	344	(198)	614747
27	0.0	3.5	0.0	chr11	27906549	27906577	(107180045)	+	(GAAA)n	Simple_repeat	1	30	(0)	614749
501	33.3	1.9	5.1	chr11	27906578	27906776	(107179846)	+	MLT1O	LTR/ERVL-MaLR	345	540	(2)	614747
425	33.7	8.4	4.2	chr11	33195844	33196128	(101890494)	C	LTR103b_Mam	LTR/ERV1?	(123)	425	128	623009
18	16.7	0.0	2.4	chr11	33196200	33196225	(101890397)	+	(TATT)n	Simple_repeat	1	26	(0)	623010
25	21.4	0.0	0.0	chr11	36309951	36310005	(98776617)	+	(CCA)n	Simple_repeat	1	55	(0)	628227
623	18.6	1.4	5.8	chr11	43358043	43358196	(91728426)	C	MER5A1	DNA/hAT-Charlie	(1)	165	19	638334
646	21.4	20.7	0.0	chr11	43358215	43358471	(91728151)	+	MER33	DNA/hAT-Charlie	1	324	(0)	638335
2316	11.2	0.6	0.6	chr11	46326039	46326350	(88760272)	+	AluSz	SINE/Alu	1	312	(0)	643777
42	2.4	0.0	0.0	chr11	46326364	46326406	(88760216)	+	(AGGG)n	Simple_repeat	1	43	(0)	643778
35	0.0	0.0	0.0	chr11	46326408	46326440	(88760182)	+	(AGGC)n	Simple_repeat	1	33	(0)	643779
2342	9.5	0.7	0.3	chr11	59628172	59628487	(75458135)	C	AluSx	SINE/Alu	(0)	312	1	657117
30	15.0	1.7	0.0	chr11	59628490	59628572	(75458050)	+	(CCTG)n	Simple_repeat	1	84	(0)	657118
77	1.4	0.0	0.0	chr11	59628573	59628645	(75457977)	+	(CCTT)n	Simple_repeat	1	73	(0)	657119
14	15.3	0.0	0.0	chr11	61161177	61161205	(73925417)	+	(CCTC)n	Simple_repeat	1	29	(0)	659602
22	27.2	3.5	4.2	chr11	61161308	61161421	(73925201)	+	(GCC)n	Simple_repeat	1	118	(0)	659603
1159	14.3	0.0	0.0	chr11	61372305	61372465	(73714157)	C	AluSx	SINE/Alu	(15)	297	137	660026
2212	10.9	0.3	1.3	chr11	61372502	61372804	(73713818)	+	AluYh3	SINE/Alu	2	301	(10)	660027
10652	10.4	7.5	4.9	chr11	61372805	61373825	(73712797)	+	MER4-int	LTR/ERV1	3212	4898	(1700)	660028
2360	8.9	0.0	0.0	chr11	62207094	62207386	(72879236)	+	AluSx	SINE/Alu	4	296	(16)	661682
236	30.7	4.0	10.4	chr11	62207387	62207515	(72879107)	C	MIRb	SINE/MIR	(103)	165	42	661679
2174	11.9	0.7	0.0	chr11	62511853	62512146	(72574476)	C	AluSx	SINE/Alu	(16)	296	1	662261
562	29.1	21.2	2.6	chr11	62512148	62512531	(72574091)	+	LTR33	LTR/ERVL	1	457	(58)	662262
1424	14.9	16.6	0.4	chr11	62512622	62512869	(72573753)	+	AluJb	SINE/Alu	1	296	(16)	662263
2863	22.0	8.7	7.7	chr11	65740730	65741367	(69345255)	C	MER66-int	LTR/ERV1	(6024)	652	2	668088
1059	31.4	12.9	3.1	chr11	66111945	66112666	(68973956)	+	L2a	LINE/L2	2582	3424	(2)	668852
1921	15.4	0.0	0.7	chr11	67718670	67718967	(67367655)	C	AluSx3	SINE/Alu	(12)	299	4	672143
2022	24.6	2.5	0.7	chr11	67718968	67719973	(67366649)	C	L1MB5	LINE/L1	(368)	5815	4818	672141
82	7.2	0.0	0.0	chr11	69206582	69206685	(65879937)	+	(CCTT)n	Simple_repeat	1	104	(0)	674701
2135	11.9	0.3	2.0	chr11	69691180	69691482	(65395140)	+	AluJb	SINE/Alu	1	298	(14)	675511
2692	18.6	0.9	0.2	chr11	69691490	69691947	(65394675)	+	MER65C	LTR/ERV1	1	461	(0)	675512
270	28.7	9.9	0.0	chr11	69700359	69700494	(65386128)	C	MER113B	DNA/hAT-Charlie	(82)	220	70	675529
17	0.0	4.0	0.0	chr11	69700767	69700791	(65385831)	+	(CCAGG)n	Simple_repeat	1	26	(0)	675530
1069	23.6	13.1	5.9	chr11	70371122	70371431	(64715191)	C	L1MD	LINE/L1	(3227)	2919	2548	676745
616	22.2	3.5	4.0	chr11	70371541	70371742	(64714880)	C	L1M4	LINE/L1	(3463)	2683	2483	676741
2835	24.6	2.2	3.3	chr11	71623521	71624515	(63462107)	+	L1MB3	LINE/L1	4818	5824	(359)	678512
1928	15.1	0.0	3.5	chr11	71624516	71624834	(63461788)	+	AluSx	SINE/Alu	4	311	(1)	678513
12	30.5	2.2	5.4	chr11	71787350	71787439	(63299183)	+	(CCCAGC)n	Simple_repeat	1	92	(0)	678781
276	32.0	9.5	1.3	chr11	72929778	72929932	(62156690)	+	L2c	LINE/L2	3218	3386	(1)	680865
2056	13.7	16.1	0.3	chr11	72930074	72930461	(62156161)	+	MER65C	LTR/ERV1	1	461	(0)	680867
294	29.0	16.4	0.7	chr11	73647967	73648105	(61438517)	+	MIRc	SINE/MIR	50	214	(54)	682325
556	32.6	7.9	2.8	chr11	76010701	76011025	(59075597)	C	L2c	LINE/L2	(340)	3079	2737	687194
199	23.1	13.6	2.7	chr11	76234188	76234298	(58852324)	+	L2b	LINE/L2	3250	3374	(1)	687578
265	25.3	10.8	0.0	chr11	76851447	76851529	(58235093)	+	L2a	LINE/L2	3334	3426	(0)	688798
274	33.9	6.3	0.8	chr11	77066139	77066257	(58020365)	C	MIRb	SINE/MIR	(21)	247	122	689200
294	26.5	4.6	0.0	chr11	79461344	79461426	(55625196)	+	MIRb	SINE/MIR	23	109	(159)	693994
1062	21.9	4.6	0.3	chr11	86283592	86283902	(48802720)	+	L1MEd	LINE/L1	880	1204	(5882)	705289
2480	12.2	0.0	0.0	chr11	93585241	93585552	(41501070)	+	AluSz	SINE/Alu	1	312	(0)	715810
1887	14.2	7.8	1.4	chr11	93585553	93585703	(41500919)	+	AluSz6	SINE/Alu	137	308	(4)	715809
49	5.4	0.0	0.0	chr11	93585706	93585763	(41500859)	+	(CAGG)n	Simple_repeat	1	58	(0)	715811
53	13.6	0.0	2.1	chr11	93585765	93585860	(41500762)	+	GA-rich	Low_complexity	1	96	(0)	715812
302	21.2	19.5	1.5	chr11	93585861	93585994	(41500628)	C	MIRb	SINE/MIR	(100)	168	5	715813
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
18300	3.7	0.3	0.1	chr11	94238529	94241278	(40845344)	C	L1PA4	LINE/L1	(372)	5782	3028	716863
2399	6.5	3.9	0.0	chr11	96243647	96243940	(38842682)	C	AluY	SINE/Alu	(5)	306	1	719852
2357	21.7	6.1	0.0	chr11	102686762	102687327	(32399295)	C	L1ME1	LINE/L1	(1)	6178	5576	728336
2655	13.8	0.2	1.4	chr11	102687331	102687763	(32398859)	+	MER61E	LTR/ERV1	9	436	(133)	728337
2230	10.7	0.3	0.3	chr11	107833240	107833537	(27253085)	+	AluSc	SINE/Alu	1	298	(11)	735605
235	32.1	14.2	9.4	chr11	107833538	107833650	(27252972)	C	MIRc	SINE/MIR	(149)	119	2	735604
2283	18.3	2.1	15.2	chr11	107833672	107834315	(27252307)	C	LTR6A	LTR/ERV1	(0)	564	1	735606
26	16.8	0.0	0.0	chr11	110514311	110514359	(24572263)	+	(GGTA)n	Simple_repeat	1	49	(0)	739968
2280	12.8	0.0	0.3	chr11	110514502	110514813	(24571809)	+	AluSx	SINE/Alu	1	311	(1)	739969
321	30.5	0.0	0.0	chr11	112467304	112467408	(22619214)	C	Mam_R4	LINE/Dong-R4	(6)	3803	3699	743172
362	28.3	12.2	4.1	chr11	112467497	112467691	(22618931)	+	MamTip2	DNA/hAT-Tip100	55	267	(38)	743173
285	24.4	22.2	0.8	chr11	114193868	114193987	(20892635)	C	MIRc	SINE/MIR	(114)	154	2	745881
3864	12.0	2.5	0.0	chr11	115587434	115587984	(19498638)	C	MER61E	LTR/ERV1	(4)	565	1	747883
3408	17.0	3.5	4.0	chr11	115587985	115588471	(19498151)	C	L1MB8	LINE/L1	(209)	5969	5481	747882
937	18.5	1.3	0.0	chr11	117590203	117590353	(17496269)	C	AluJb	SINE/Alu	(24)	288	136	751407
315	27.3	2.0	2.0	chr11	117590354	117590454	(17496168)	C	MER113A	DNA/hAT-Charlie	(213)	101	1	751406
771	21.7	5.3	0.0	chr11	119229469	119229611	(15857011)	+	AluJo	SINE/Alu	137	287	(25)	754506
17	3.5	6.9	0.0	chr11	119229612	119229640	(15856982)	+	(CAA)n	Simple_repeat	1	31	(0)	754507
301	30.9	1.2	0.0	chr11	120128622	120128702	(14957920)	C	L2a	LINE/L2	(5)	3421	3340	756006
21	3.6	0.0	0.0	chr11	120128875	120128903	(14957719)	+	(CCAGC)n	Simple_repeat	1	29	(0)	756007
1249	17.6	0.0	7.1	chr11	121332768	121333005	(13753617)	+	AluJr	SINE/Alu	2	222	(90)	757944
20	8.0	0.0	0.0	chr11	121333017	121333043	(13753579)	+	(A)n	Simple_repeat	1	27	(0)	757945
5717	14.8	2.6	0.5	chr11	121333044	121333966	(13752656)	+	L1MC1	LINE/L1	5560	6502	(6)	757943
35	7.7	0.0	1.7	chr11	121780935	121780989	(13305633)	+	(TGCC)n	Simple_repeat	1	54	(0)	758619
83	1.3	0.0	0.0	chr11	121780990	121781067	(13305555)	+	(CCTT)n	Simple_repeat	1	78	(0)	758620
1600	20.2	1.4	1.1	chr11	121781081	121781367	(13305255)	C	AluJb	SINE/Alu	(24)	288	1	758621
834	20.9	0.0	10.4	chr11	124228104	124228314	(10858308)	+	AluJb	SINE/Alu	87	275	(37)	762735
39	0.0	0.0	0.0	chr11	124228335	124228370	(10858252)	+	(AGGC)n	Simple_repeat	1	36	(0)	762736
375	24.6	12.6	3.6	chr11	127843728	127843921	(7242701)	+	HAL1	LINE/L1	1391	1604	(903)	768106
247	27.1	1.2	1.2	chr11	127843980	127844065	(7242557)	C	MER5A1	DNA/hAT-Charlie	(80)	86	1	768108
306	31.6	5.4	6.6	chr11	127844148	127844449	(7242173)	+	HAL1	LINE/L1	1815	2112	(395)	768106
278	22.9	11.8	0.0	chr11	128030767	128030871	(7055751)	C	MLT1L	LTR/ERVL-MaLR	(288)	322	204	768361
87	20.7	3.2	2.9	chr11	128030947	128031182	(7055440)	+	GA-rich	Low_complexity	1	236	(0)	768362
307	9.1	0.0	0.0	chr11	128031184	128031227	(7055395)	C	MLT2A1	LTR/ERVL	(165)	279	236	768363
415	34.3	7.5	0.5	chr11	128031275	128031473	(7055149)	+	MIRc	SINE/MIR	20	233	(35)	768364
14	17.5	0.0	0.0	chr11	128891282	128891313	(6195309)	+	(CCCCG)n	Simple_repeat	1	32	(0)	769533
40	5.3	4.9	0.0	chr11	128891365	128891397	(6195225)	+	(GA)n	Simple_repeat	1	34	(0)	769534
53	0.0	0.0	0.0	chr11	128891398	128891442	(6195180)	+	(AC)n	Simple_repeat	1	45	(0)	769535
40	5.3	4.9	0.0	chr11	128891443	128891476	(6195146)	+	(GA)n	Simple_repeat	2	35	(0)	769536
548	2.3	1.2	1.4	chr12	10001	10585	(133264724)	+	(CTAACC)n	Simple_repeat	1	592	(0)	778084
1438	14.6	4.0	5.1	chr12	203038	203337	(133071972)	C	AluSx1	SINE/Alu	(0)	312	33	778380
594	27.2	11.3	1.2	chr12	1804562	1804814	(131470495)	+	MLT1J	LTR/ERVL-MaLR	28	309	(203)	781294
232	18.6	11.4	0.0	chr12	1804831	1804900	(131470409)	+	MLT1J	LTR/ERVL-MaLR	392	470	(42)	781294
130	15.7	4.7	4.5	chr12	2070843	2071172	(131204137)	+	(CTTC)n	Simple_repeat	1	334	(0)	781644
43	0.0	0.0	0.0	chr12	2071173	2071211	(131204098)	+	(CCTG)n	Simple_repeat	1	39	(0)	781645
130	15.7	4.7	4.5	chr12	2071212	2071239	(131204070)	+	(CTTC)n	Simple_repeat	3	27	(0)	781646
1559	19.3	1.1	2.8	chr12	2071241	2071525	(131203784)	C	AluJo	SINE/Alu	(32)	280	1	781647
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
568	29.0	10.1	0.9	chr12	2290977	2291192	(130984117)	+	MIRb	SINE/MIR	29	266	(2)	781989
356	32.0	4.9	8.3	chr12	2768157	2768397	(130506912)	+	L2c	LINE/L2	3071	3307	(80)	782615
200	13.2	2.6	2.6	chr12	2768385	2768423	(130506886)	+	L2c	LINE/L2	3269	3307	(80)	782616
189	15.8	2.6	2.6	chr12	2768432	2768470	(130506839)	+	L2c	LINE/L2	3269	3307	(80)	782616
270	25.4	2.6	10.2	chr12	2768479	2768605	(130506704)	+	L2c	LINE/L2	3269	3385	(2)	782617
15	10.8	3.3	0.0	chr12	4031250	4031279	(129244030)	+	(CCGC)n	Simple_repeat	1	31	(0)	784812
12	29.7	0.0	2.1	chr12	4031354	4031401	(129243908)	+	(GCGCT)n	Simple_repeat	1	48	(0)	784813
12	15.7	6.5	4.1	chr12	4031390	4031435	(129243874)	+	(GCGCC)n	Simple_repeat	1	49	(0)	784814
275	23.7	22.4	0.8	chr12	5344414	5344532	(127930777)	+	MIR3	SINE/MIR	54	205	(3)	786891
2036	16.4	7.6	1.4	chr12	10361565	10361996	(122913313)	C	MER65C	LTR/ERV1	(0)	461	1	795147
508	15.8	4.0	0.0	chr12	10362001	10362095	(122913214)	C	MLT1A	LTR/ERVL-MaLR	(275)	99	1	795148
3801	25.5	6.8	1.5	chr12	10551776	10552971	(122722338)	C	L1MCc	LINE/L1	(2377)	4564	3288	795340
3127	13.3	14.8	0.7	chr12	10552972	10553515	(122721794)	+	MER51A	LTR/ERV1	1	634	(0)	795341
21	0.0	0.0	0.0	chr12	11714650	11714672	(121560637)	+	(A)n	Simple_repeat	1	23	(0)	796914
59	3.3	0.0	0.0	chr12	13000193	13000254	(120275055)	+	(GGCGGCAG)n	Simple_repeat	1	62	(0)	799225
15	12.1	3.9	7.4	chr12	13000268	13000319	(120274990)	+	(GGCAGA)n	Simple_repeat	1	54	(0)	799226
12	20.8	0.0	2.9	chr12	20212591	20212625	(113062684)	+	A-rich	Low_complexity	1	35	(0)	809366
15	8.3	0.0	3.6	chr12	22519026	22519053	(110756256)	+	(CCTG)n	Simple_repeat	1	28	(0)	812225
3207	14.5	2.5	1.8	chr12	24969926	24970463	(108304846)	C	MER61E	LTR/ERV1	(19)	657	4	815731
239	23.2	0.0	9.7	chr12	24970464	24970503	(108304806)	+	MER63B	DNA/hAT-Blackjack	402	435	(1)	815732
12	32.8	0.0	0.0	chr12	24970594	24970642	(108304667)	+	A-rich	Low_complexity	1	49	(0)	815733
306	27.7	16.3	2.0	chr12	26734071	26734246	(106541063)	C	MIRb	SINE/MIR	(39)	229	28	818380
23601	10.5	0.6	0.4	chr12	27169708	27172339	(106102970)	C	L1PA7	LINE/L1	(3832)	2629	2	819102
1332	23.2	5.5	3.4	chr12	27172313	27172369	(106102940)	C	L1M2	LINE/L1	(683)	5761	5705	819104
2585	13.5	5.4	5.4	chr12	27172370	27172659	(106102650)	+	MER65C	LTR/ERV1	1	296	(165)	819105
2106	15.7	0.3	0.7	chr12	27172660	27172964	(106102345)	+	AluJb	SINE/Alu	1	304	(8)	819106
24	20.1	2.8	2.7	chr12	27970313	27970384	(105304925)	+	G-rich	Low_complexity	1	74	(0)	820421
23	15.9	5.4	0.0	chr12	28629888	28629943	(104645366)	+	(GGCA)n	Simple_repeat	1	59	(0)	821321
200	32.5	9.9	4.8	chr12	30320142	30320477	(102954832)	C	L2	LINE/L2	(1639)	1780	1426	823557
360	23.1	4.6	0.0	chr12	31682072	31682175	(101593134)	+	MER103C	DNA/hAT-Charlie	65	173	(124)	825802
1647	20.4	5.6	7.6	chr12	31682254	31682804	(101592505)	C	LTR55	LTR/ERVL?	(2)	546	8	825803
1477	23.6	6.5	7.7	chr12	31922497	31923214	(101352095)	C	LTR25	LTR/ERV1	(37)	807	1	826378
4473	12.4	5.4	2.4	chr12	32050035	32050660	(101224649)	+	Tigger3b	DNA/TcMar-Tigger	1	658	(573)	826692
3224	19.5	1.7	3.4	chr12	32419520	32420166	(100855143)	C	L1M1	LINE/L1	(6910)	655	20	827453
422	15.5	1.4	0.0	chr12	32420167	32420237	(100855072)	C	LTR48B	LTR/ERV1	(572)	72	1	827451
1950	21.5	7.2	10.6	chr12	33179415	33180118	(100095191)	C	MER61E	LTR/ERV1	(29)	750	3	828719
1836	22.9	10.3	1.9	chr12	33180119	33180384	(100094925)	C	L1MD3	LINE/L1	(31)	7964	7660	828720
1761	24.6	2.0	2.4	chr12	38882046	38882540	(94392769)	+	MLT1D	LTR/ERVL-MaLR	13	505	(0)	831663
322	32.1	9.9	10.1	chr12	46126139	46126554	(87148755)	C	L2c	LINE/L2	(1)	3386	2972	841857
815	31.9	2.7	2.7	chr12	47556001	47556261	(85719048)	+	MIRb	SINE/MIR	2	262	(6)	843855
3444	12.7	6.7	0.4	chr12	47556306	47556834	(85718475)	+	MER61E	LTR/ERV1	1	565	(4)	843856
13	13.1	0.0	0.0	chr12	47963539	47963563	(85311746)	+	(GCGC)n	Simple_repeat	1	25	(0)	844505
2412	9.5	0.0	0.3	chr12	51079794	51080099	(82195210)	+	AluSc	SINE/Alu	2	306	(3)	850554
57	1.8	0.0	0.0	chr12	51080122	51080177	(82195132)	+	(AGGC)n	Simple_repeat	1	56	(0)	850555
1685	11.5	0.0	2.1	chr12	51312951	51313184	(81962125)	+	AluSx	SINE/Alu	1	229	(83)	851096
47	2.2	0.0	0.0	chr12	51313185	51313231	(81962078)	+	(AGGA)n	Simple_repeat	1	47	(0)	851097
27	3.5	0.0	0.0	chr12	51313249	51313278	(81962031)	+	(AGGG)n	Simple_repeat	1	30	(0)	851098
2264	11.0	0.0	0.7	chr12	51313330	51313639	(81961670)	C	AluSq2	SINE/Alu	(4)	309	2	851099
1456	14.5	10.6	1.2	chr12	53094708	53094990	(80180319)	C	AluJb	SINE/Alu	(0)	312	12	854051
2282	8.9	1.4	0.0	chr12	53508280	53508570	(79766739)	+	AluSq	SINE/Alu	1	295	(18)	854877
25	24.2	1.2	3.6	chr12	54549560	54549642	(78725667)	+	(CGG)n	Simple_repeat	1	84	(0)	856639
1058	25.5	0.8	0.0	chr12	55627017	55627275	(77648034)	+	MIR	SINE/MIR	1	261	(1)	857953
3803	29.6	5.8	7.8	chr12	55627276	55627938	(77647371)	C	ERVL-B4-int	LTR/ERVL	(1783)	3931	3312	857949
656	7.3	1.0	0.0	chr12	66168839	66168934	(67106375)	+	L1MB2	LINE/L1	6070	6166	(5)	873911
1901	16.9	8.2	0.9	chr12	66213367	66213785	(67061524)	+	L1MC1	LINE/L1	5882	6333	(0)	873987
205	29.0	4.6	0.0	chr12	66213827	66213888	(67061421)	+	L2a	LINE/L2	3353	3417	(9)	873988
346	34.5	4.0	3.5	chr12	66213904	66214104	(67061205)	C	L2c	LINE/L2	(255)	3132	2931	873984
1983	12.1	0.0	5.7	chr12	66214242	66214538	(67060771)	+	AluSz	SINE/Alu	1	280	(32)	873989
580	28.1	9.5	2.7	chr12	67222181	67222545	(66052764)	C	LTR50	LTR/ERVL	(111)	684	84	875583
274	38.8	1.2	1.2	chr12	67222777	67222948	(66052361)	C	ERVL-E-int	LTR/ERVL	(4802)	194	23	875582
529	13.0	4.1	0.9	chr12	67759751	67759863	(65515446)	+	MER61E	LTR/ERV1	1	122	(472)	876388
266	23.4	1.5	0.0	chr12	67759969	67760032	(65515277)	+	MER61E	LTR/ERV1	159	223	(544)	876388
1571	18.6	12.2	1.1	chr12	67760028	67760439	(65514870)	+	LTR25	LTR/ERV1	161	844	(0)	876389
3543	5.4	0.0	0.7	chr12	67771896	67772346	(65502963)	C	LTR7	LTR/ERV1	(2)	448	1	876395
1374	31.0	7.9	5.0	chr12	69343399	69344364	(63930945)	C	HAL1	LINE/L1	(1507)	1000	4	879098
2154	9.0	0.3	4.1	chr12	69446453	69446742	(63828567)	C	AluSx3	SINE/Alu	(32)	279	1	879299
667	27.1	14.5	9.3	chr12	69446743	69447087	(63828222)	C	HAL1	LINE/L1	(1592)	915	539	879296
592	10.3	6.0	0.0	chr12	69568410	69568487	(63706822)	+	AluJo	SINE/Alu	136	218	(94)	879529
28	0.0	0.0	0.0	chr12	69568511	69568537	(63706772)	+	(CTGC)n	Simple_repeat	1	27	(0)	879530
48	7.1	0.0	0.0	chr12	69568556	69568614	(63706695)	+	(TC)n	Simple_repeat	1	59	(0)	879531
82	2.5	0.0	0.0	chr12	70626286	70626366	(62648943)	+	(TCTA)n	Simple_repeat	1	81	(0)	881195
38	0.0	0.0	0.0	chr12	70626370	70626404	(62648905)	+	(CCTG)n	Simple_repeat	1	35	(0)	881196
16	0.0	0.0	0.0	chr12	70626405	70626425	(62648884)	+	(ACCT)n	Simple_repeat	1	21	(0)	881197
1949	14.0	4.4	0.3	chr12	70626434	70626763	(62648546)	+	MER2	DNA/TcMar-Tigger	2	345	(0)	881198
462	29.4	2.1	2.0	chr12	72917539	72917695	(60357614)	+	MIRb	SINE/MIR	17	167	(95)	884385
398	28.9	2.7	1.3	chr12	72917708	72917859	(60357450)	+	MLT1I	LTR/ERVL-MaLR	53	208	(203)	884386
878	25.8	0.5	9.1	chr12	72917874	72918116	(60357193)	C	MER58A	DNA/hAT-Charlie	(1)	223	2	884387
22537	11.5	1.8	3.1	chr12	75461126	75467572	(57807737)	C	L1PA8	LINE/L1	(4)	6353	4	887566
905	22.1	1.1	0.0	chr12	78064191	78064371	(55210938)	C	MLT1B	LTR/ERVL-MaLR	(16)	374	192	891667
49	14.2	2.2	0.0	chr12	78064384	78064472	(55210837)	+	(TCTG)n	Simple_repeat	1	91	(0)	891668
648	19.9	9.3	2.9	chr12	78064492	78064662	(55210647)	C	MLT1B	LTR/ERVL-MaLR	(206)	184	2	891667
266	21.3	1.6	0.0	chr12	87253395	87253455	(46021854)	C	LTR27C	LTR/ERV1	(544)	223	162	903974
528	13.1	1.2	0.0	chr12	87253591	87253674	(46021635)	C	MER61E	LTR/ERV1	(484)	85	1	903975
341	25.4	9.2	0.8	chr12	87253831	87253949	(46021360)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	420	903976
867	23.9	0.6	0.6	chr12	89217174	89217353	(44057956)	+	AluJb	SINE/Alu	133	312	(0)	906653
37	9.3	0.0	0.0	chr12	89217387	89217443	(44057866)	+	(AGGC)n	Simple_repeat	1	57	(0)	906654
549	30.4	9.9	0.5	chr12	89239014	89239205	(44036104)	+	MIRb	SINE/MIR	20	231	(37)	906683
291	24.0	20.0	0.0	chr12	92407793	92407892	(40867417)	C	MIR	SINE/MIR	(130)	132	8	911485
404	38.4	3.9	5.1	chr12	92407904	92408058	(40867251)	+	L3	LINE/CR1	3864	4017	(82)	911482
1101	27.9	8.1	4.0	chr12	92408059	92408483	(40866826)	+	MLT1J2	LTR/ERVL-MaLR	5	448	(0)	911486
13	18.9	4.5	2.2	chr12	93571265	93571308	(39704001)	+	(CGGCG)n	Simple_repeat	1	46	(0)	913737
30	18.5	2.7	1.3	chr12	93571496	93571570	(39703739)	+	(CTCC)n	Simple_repeat	1	77	(0)	913738
506	28.5	11.7	1.3	chr12	96467276	96467428	(36807881)	C	MLT1O	LTR/ERVL-MaLR	(341)	201	31	919127
655	31.5	7.7	5.8	chr12	98635951	98636183	(34639126)	+	Tigger10	DNA/TcMar-Tigger	130	357	(1487)	922667
756	20.0	5.2	0.6	chr12	98636184	98636349	(34638960)	C	MER5B	DNA/hAT-Charlie	(1)	177	4	922668
250	30.4	8.4	5.9	chr12	101857754	101857932	(31417377)	+	L2	LINE/L2	2345	2532	(887)	928110
18	0.0	0.0	0.0	chr12	105084231	105084253	(28191056)	+	(TTTG)n	Simple_repeat	1	23	(0)	933801
11	34.9	1.4	1.4	chr12	105084548	105084617	(28190692)	+	(GCCCGCC)n	Simple_repeat	1	71	(0)	933802
12	25.3	0.0	5.8	chr12	106903727	106903778	(26371531)	+	G-rich	Low_complexity	1	52	(0)	937042
495	33.3	7.5	1.7	chr12	107981959	107982260	(25293049)	+	L2	LINE/L2	2527	2847	(572)	939202
2737	14.1	3.2	1.6	chr12	109033164	109033616	(24241693)	C	MER65C	LTR/ERV1	(0)	461	1	941597
12	14.4	0.0	0.0	chr12	109764406	109764429	(23510880)	+	(CTT)n	Simple_repeat	1	24	(0)	943239
10696	12.8	7.7	1.0	chr12	111851626	111852654	(21422655)	+	Tigger2	DNA/TcMar-Tigger	1648	2714	(4)	948029
4826	14.3	6.6	5.7	chr12	112010307	112011300	(21264009)	C	MER52C	LTR/ERV1	(0)	1278	276	948296
1948	15.8	0.0	1.0	chr12	113319796	113320092	(19955217)	C	AluJo	SINE/Alu	(18)	294	1	951274
404	24.8	1.1	2.3	chr12	113320130	113320240	(19955069)	+	MLT1K	LTR/ERVL-MaLR	493	592	(18)	951275
274	31.1	2.4	2.4	chr12	115194386	115194510	(18080799)	C	L2b	LINE/L2	(299)	3076	2952	955490
535	25.9	5.8	6.4	chr12	117228148	117228358	(16046951)	C	MIR	SINE/MIR	(2)	228	9	959851
2425	7.6	0.0	1.3	chr12	117228778	117229080	(16046229)	C	AluY	SINE/Alu	(12)	299	1	959852
797	26.8	12.2	6.4	chr12	120970120	120970263	(12305046)	+	MER113	DNA/hAT-Charlie	379	516	(5)	968248
333	27.4	12.6	6.1	chr12	120970335	120970497	(12304812)	C	MER63A	DNA/hAT-Blackjack	(0)	210	36	968251
2148	11.6	0.0	0.0	chr12	120970810	120971110	(12304199)	C	AluSz	SINE/Alu	(11)	301	1	968252
766	26.6	16.8	2.5	chr12	123602672	123603383	(9671926)	C	L2a	LINE/L2	(0)	3426	2555	974524
2502	13.3	1.2	2.9	chr12	124142222	124142561	(9132748)	C	L1MB5	LINE/L1	(0)	6174	5832	975547
3560	11.5	3.5	4.0	chr12	124142562	124143133	(9132176)	+	MER61E	LTR/ERV1	1	569	(0)	975548
15	3.9	0.0	9.4	chr12	124674442	124674473	(8600836)	+	(CCT)n	Simple_repeat	1	32	(0)	976544
27	6.0	0.0	0.0	chr12	124674547	124674581	(8600728)	+	(GGCA)n	Simple_repeat	1	35	(0)	976545
19	4.3	0.0	0.0	chr12	126729650	126729673	(6545636)	+	(AT)n	Simple_repeat	1	24	(0)	980287
579	30.7	3.1	2.3	chr12	126729755	126729974	(6545335)	C	L2a	LINE/L2	(558)	2861	2640	980284
24	27.8	1.6	0.0	chr12	126730025	126730085	(6545224)	+	(AT)n	Simple_repeat	1	62	(0)	980288
1335	16.9	15.5	0.0	chr12	128820844	128821197	(4454112)	+	MSTB1	LTR/ERVL-MaLR	1	419	(13)	983918
764	29.4	5.5	7.0	chr12	128821368	128821606	(4453703)	C	MER58B	DNA/hAT-Charlie	(18)	323	85	983919
320	28.5	7.1	2.3	chr12	129558567	129558699	(3716610)	C	LTR33B	LTR/ERVL	(326)	177	38	985261
851	25.6	12.9	0.0	chr12	129558779	129559067	(3716242)	C	Charlie2b	DNA/hAT-Charlie	(675)	2107	1776	985256
12	13.9	0.0	0.0	chr12	132193241	132193264	(1082045)	+	(TGTC)n	Simple_repeat	1	24	(0)	989194
257	24.6	0.0	0.0	chr12	132193418	132193474	(1081835)	+	LTR33A	LTR/ERVL	416	472	(48)	989195
11	14.5	7.5	2.3	chr12	132710536	132710575	(564734)	+	(CTCCGGC)n	Simple_repeat	1	43	(0)	989824
20	35.9	1.0	1.0	chr12	132711086	132711182	(564127)	+	G-rich	Low_complexity	1	98	(0)	989825
21	6.4	0.0	2.9	chr12	132887158	132887192	(388117)	+	(CCCGGC)n	Simple_repeat	1	35	(0)	990111
3547	16.9	4.0	4.4	chr13	20683985	20684907	(93679421)	C	HERVK9-int	LTR/ERVK	(5198)	898	1	994693
201	30.1	0.0	6.7	chr13	26673864	26673952	(87690376)	C	L2c	LINE/L2	(221)	3166	3084	1003614
184	30.6	0.0	1.6	chr13	26674044	26674106	(87690222)	C	L2c	LINE/L2	(340)	3035	2974	1003614
239	27.9	1.2	2.5	chr13	26674194	26674274	(87690054)	C	L1MC4	LINE/L1	(149)	7893	7814	1003615
326	0.0	0.0	0.0	chr13	26674296	26674330	(87689998)	C	U2	snRNA	(153)	35	1	1003616
276	27.3	14.7	0.0	chr13	27336675	27336773	(87027555)	+	L2b	LINE/L2	3259	3374	(1)	1004755
726	20.3	10.3	1.6	chr13	27451673	27451857	(86912471)	C	MIR	SINE/MIR	(1)	261	59	1004969
183	20.4	9.3	7.5	chr13	28655748	28655800	(85708528)	C	L2b	LINE/L2	(22)	3353	3300	1007112
24	23.2	5.3	2.0	chr13	31199925	31200018	(83164310)	+	(GGC)n	Simple_repeat	1	99	(0)	1011022
21	24.9	3.2	4.2	chr13	31200242	31200334	(83163994)	+	(GCGCC)n	Simple_repeat	1	96	(0)	1011023
1678	28.4	13.5	4.9	chr13	32298441	32299008	(82065320)	C	L2a	LINE/L2	(0)	3426	2806	1012560
27	19.2	5.1	1.2	chr13	32586968	32587046	(81777282)	+	(GCCGCC)n	Simple_repeat	1	83	(0)	1013055
15	23.9	4.3	6.1	chr13	32587131	32587224	(81777104)	+	G-rich	Low_complexity	1	98	(0)	1013056
3433	19.9	5.2	4.1	chr13	32622831	32623638	(81740690)	C	LTR8B	LTR/ERV1	(20)	800	1	1013111
242	34.0	5.1	3.9	chr13	33723617	33723772	(80640556)	+	Plat_L3	LINE/CR1	3427	3584	(2)	1014704
15	13.9	0.0	0.0	chr13	33763276	33763299	(80601029)	+	(T)n	Simple_repeat	1	24	(0)	1014780
13	18.9	2.8	0.0	chr13	35984680	35984715	(78379613)	+	(ATTTTCC)n	Simple_repeat	1	37	(0)	1017908
570	29.1	5.9	1.1	chr13	37129620	37129796	(77234532)	C	LTR33B	LTR/ERVL	(317)	186	1	1019601
1918	20.0	0.7	5.5	chr13	37129906	37130339	(77233989)	C	MLT2D	LTR/ERVL	(1)	413	1	1019602
314	34.1	3.7	0.0	chr13	37130375	37130503	(77233825)	+	Tigger11a	DNA/TcMar-Tigger	23	156	(579)	1019603
3596	13.6	1.9	0.2	chr13	37914792	37915343	(76448985)	C	MER61E	LTR/ERV1	(4)	565	4	1020597
8110	23.9	10.9	5.5	chr13	37915344	37917341	(76446987)	C	L1M4b	LINE/L1	(4789)	2078	21	1020595
64	14.1	0.0	0.9	chr13	37985179	37985289	(76379039)	+	GA-rich	Low_complexity	1	111	(0)	1020697
547	32.9	6.8	1.4	chr13	37985298	37985507	(76378821)	+	MLT1E1A	LTR/ERVL-MaLR	266	487	(193)	1020698
478	27.5	0.0	8.4	chr13	37985563	37985705	(76378623)	C	MLT1A1	LTR/ERVL-MaLR	(521)	133	3	1020691
1803	23.2	2.9	7.0	chr13	38085699	38086226	(76278102)	+	MER52D	LTR/ERV1	1	972	(1151)	1020809
6978	17.6	1.1	7.8	chr13	38086232	38087586	(76276742)	+	LTR2752	LTR/ERV1	1	1263	(0)	1020810
10147	16.6	4.8	2.2	chr13	38264363	38265817	(76098511)	+	L1PA10	LINE/L1	10	1488	(4973)	1021032
243	32.4	9.1	9.3	chr13	39541441	39541794	(74822534)	+	L2a	LINE/L2	3013	3401	(25)	1022767
2052	27.3	7.6	5.7	chr13	45209669	45210719	(69153609)	+	L2a	LINE/L2	2351	3426	(0)	1031798
326	30.5	6.3	0.0	chr13	45613709	45613826	(68750502)	+	LTR90A	LTR	168	293	(683)	1032587
612	37.1	4.6	3.4	chr13	47419845	47420338	(66943990)	+	MLT1N2	LTR/ERVL-MaLR	6	505	(57)	1035294
19	14.2	0.0	0.0	chr13	48618862	48618892	(65745436)	+	(T)n	Simple_repeat	1	31	(0)	1037107
1317	18.3	0.0	0.0	chr13	48618893	48619100	(65745228)	C	AluJb	SINE/Alu	(56)	256	49	1037108
4399	8.0	1.4	0.4	chr13	48619101	48619663	(65744665)	+	MER61E	LTR/ERV1	1	569	(0)	1037109
1124	23.8	10.1	5.2	chr13	50616501	50616978	(63747350)	C	Charlie11	DNA/hAT-Charlie	(88)	2108	1605	1040388
24	16.9	0.0	0.0	chr13	50743131	50743171	(63621157)	+	GA-rich	Low_complexity	1	41	(0)	1040588
30	0.0	0.0	0.0	chr13	50743175	50743202	(63621126)	+	(AGGC)n	Simple_repeat	1	28	(0)	1040589
759	25.5	9.1	1.7	chr13	50743382	50743616	(63620712)	+	MIRb	SINE/MIR	6	259	(9)	1040590
1159	25.2	18.0	0.7	chr13	51520121	51520547	(62843781)	C	L2a	LINE/L2	(0)	3426	2910	1041717
1786	18.9	6.0	5.4	chr13	51520680	51521142	(62843186)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	2	1041718
434	31.6	8.5	3.3	chr13	52066825	52067191	(62297137)	C	L1ME4a	LINE/L1	(1085)	5061	4674	1042509
1491	23.4	8.0	15.5	chr13	52067292	52067676	(62296652)	+	MER61E	LTR/ERV1	1	462	(382)	1042511
1661	16.8	9.9	7.3	chr13	53873455	53873903	(60490425)	C	MER51E	LTR/ERV1	(19)	463	2	1045224
404	14.6	0.0	3.5	chr13	53873904	53873979	(60490349)	C	MER51E	LTR/ERV1	(407)	75	3	1045225
574	22.4	6.9	0.0	chr13	53873994	53874127	(60490201)	C	MER3	DNA/hAT-Charlie	(59)	150	7	1045226
315	39.3	2.8	1.0	chr13	58373605	58373812	(55990516)	C	MIRb	SINE/MIR	(8)	260	49	1050677
85	3.5	0.0	0.0	chr13	59756410	59756497	(54607831)	+	(AAGG)n	Simple_repeat	1	88	(0)	1052536
19	7.2	0.0	0.0	chr13	59756498	59756526	(54607802)	+	(CAGG)n	Simple_repeat	1	29	(0)	1052537
39	4.7	0.0	0.0	chr13	59756527	59756571	(54607757)	+	(AGGG)n	Simple_repeat	1	45	(0)	1052538
8180	14.2	4.4	8.7	chr13	62045425	62047076	(52317252)	C	LTR12C	LTR/ERV1	(0)	1579	3	1055532
2768	17.7	14.2	7.5	chr13	64879796	64880504	(49483824)	C	LTR1	LTR/ERV1	(18)	765	1	1059088
1800	21.6	6.7	4.6	chr13	66224563	66225061	(48139267)	C	MER67D	LTR/ERV1	(4)	510	1	1060777
466	28.2	11.7	5.8	chr13	66225062	66225158	(48139170)	+	MER20B	DNA/hAT-Charlie	152	276	(507)	1060776
2358	14.7	6.7	1.5	chr13	66225159	66225567	(48138761)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	1060778
34	18.1	0.0	3.9	chr13	66897204	66897281	(47467047)	+	GA-rich	Low_complexity	1	78	(0)	1061597
6164	19.9	10.4	10.4	chr13	67106544	67108296	(47256032)	+	MER52A	LTR/ERV1	3	1755	(0)	1061860
1331	21.8	0.0	1.2	chr13	67745072	67745317	(46619011)	+	Tigger5	DNA/TcMar-Tigger	14	256	(2150)	1062663
3217	14.8	1.5	0.0	chr13	67745318	67745832	(46618496)	+	Tigger5	DNA/TcMar-Tigger	1884	2406	(0)	1062664
263	32.5	3.1	3.8	chr13	71710512	71710642	(42653686)	C	L2c	LINE/L2	(447)	2972	2843	1067806
7616	23.6	3.2	7.5	chr13	72219942	72222100	(42142228)	C	L1MA4A	LINE/L1	(4775)	2074	11	1068503
805	18.0	1.3	0.7	chr13	72686465	72686615	(41677713)	+	MLT1A0	LTR/ERVL-MaLR	214	365	(0)	1069168
2458	10.4	0.3	0.0	chr13	73021489	73021786	(41342542)	C	AluSx1	SINE/Alu	(13)	299	1	1069769
472	23.4	0.0	7.9	chr13	73021787	73021834	(41342494)	+	L1MA10	LINE/L1	6284	6327	(7)	1069768
14	23.2	2.1	2.1	chr13	73021851	73021897	(41342431)	+	(AGGC)n	Simple_repeat	1	48	(0)	1069770
1166	25.2	4.7	3.6	chr13	73021898	73022259	(41342069)	+	L1MC5a	LINE/L1	1905	2270	(507)	1069771
905	27.1	11.1	2.3	chr13	74593680	74594072	(39770256)	+	HAL1	LINE/L1	1373	1804	(703)	1072153
344	31.6	12.9	4.5	chr13	74594075	74594342	(39769986)	+	HAL1	LINE/L1	1850	2143	(364)	1072153
1324	25.0	5.3	0.0	chr13	74594378	74594665	(39769663)	+	MLT1F2	LTR/ERVL-MaLR	257	560	(0)	1072154
5715	9.5	0.8	0.1	chr13	75211822	75212654	(39151674)	+	L1PA10	LINE/L1	5313	6156	(12)	1072982
35	5.4	0.0	0.0	chr13	75480868	75480906	(38883422)	+	(CA)n	Simple_repeat	1	39	(0)	1073408
2302	28.7	6.5	2.5	chr13	77196086	77196906	(37167422)	C	L2a	LINE/L2	(298)	3128	2274	1075829
424	30.4	6.3	4.0	chr13	77196922	77197247	(37167081)	C	L2-3_Crp	LINE/L2	(1056)	1040	707	1075830
16	4.3	0.0	3.9	chr13	77329420	77329445	(37034883)	+	(CTC)n	Simple_repeat	1	26	(0)	1076038
195	39.0	8.2	5.8	chr13	77729635	77729895	(36634433)	C	L2b	LINE/L2	(19)	3356	3089	1076598
20	7.8	0.0	0.0	chr13	77729902	77729928	(36634400)	+	(TG)n	Simple_repeat	1	27	(0)	1076599
320	31.7	14.6	2.4	chr13	77730058	77730267	(36634061)	C	L2b	LINE/L2	(363)	3056	2817	1076598
275	36.5	0.0	8.7	chr13	78827510	78827647	(35536681)	+	MLT1L	LTR/ERVL-MaLR	9	134	(476)	1078086
258	33.7	4.7	2.6	chr13	78827660	78827848	(35536480)	+	MLT1L	LTR/ERVL-MaLR	208	400	(195)	1078086
437	32.5	13.3	3.4	chr13	79598359	79598921	(34765407)	+	L2b	LINE/L2	2737	3373	(2)	1079173
3840	10.6	3.2	0.2	chr13	83941698	83942245	(30422083)	+	MER61E	LTR/ERV1	1	565	(4)	1084592
1416	34.0	5.8	4.3	chr13	84194042	84194622	(30169706)	C	Charlie24	DNA/hAT-Charlie	(1479)	971	382	1084913
33	0.0	0.0	0.0	chr13	84194641	84194709	(30169619)	+	(CTGC)n	Simple_repeat	1	69	(0)	1084916
73	0.0	1.5	0.0	chr13	84194710	84194777	(30169551)	+	(CCTT)n	Simple_repeat	1	69	(0)	1084917
349	26.9	6.7	2.1	chr13	84194790	84194975	(30169353)	C	Charlie24	DNA/hAT-Charlie	(2116)	334	140	1084918
2281	13.9	4.9	4.7	chr13	85372289	85372483	(28991845)	+	MSTB1	LTR/ERVL-MaLR	1	201	(231)	1086461
1591	13.0	1.6	6.5	chr13	85372484	85372744	(28991584)	+	AluSx1	SINE/Alu	1	248	(64)	1086462
2281	13.9	4.9	4.7	chr13	85372745	85372978	(28991350)	+	MSTB1	LTR/ERVL-MaLR	202	431	(1)	1086461
2851	27.5	9.4	4.8	chr13	86038275	86039091	(28325237)	C	L1MC3	LINE/L1	(14)	7771	6881	1087280
39	4.7	0.0	0.0	chr13	86039092	86039136	(28325192)	+	(TGCC)n	Simple_repeat	1	45	(0)	1087281
2851	27.5	9.4	4.8	chr13	86039137	86039449	(28324879)	C	L1MC3	LINE/L1	(905)	6880	6579	1087280
654	23.6	0.6	3.1	chr13	87600505	87600666	(26763662)	+	MLT2C1	LTR/ERVL	140	297	(167)	1089201
1835	18.6	5.5	4.2	chr13	87600709	87601134	(26763194)	C	Tigger2a	DNA/TcMar-Tigger	(0)	434	3	1089208
2998	28.1	12.3	9.3	chr13	88163266	88164861	(26199467)	C	MSTB2-int	LTR/ERVL-MaLR	(0)	1651	1	1089963
1355	21.2	12.8	4.4	chr13	88164862	88165266	(26199062)	C	MSTB2	LTR/ERVL-MaLR	(13)	444	1	1089963
3588	21.1	0.7	2.3	chr13	88876307	88877078	(25487250)	C	MER49	LTR/ERV1	(10)	913	153	1090872
234	35.9	8.4	2.8	chr13	89634157	89634368	(24729960)	+	MLT1H1-int	LTR/ERVL-MaLR	592	816	(593)	1091881
440	28.8	15.0	1.3	chr13	89634421	89634575	(24729753)	+	MLT1H1-int	LTR/ERVL-MaLR	949	1128	(281)	1091881
347	28.4	7.0	4.5	chr13	89634588	89634922	(24729406)	C	L1MC5a	LINE/L1	(1477)	1300	957	1091882
2741	15.5	5.2	5.3	chr13	90591899	90592436	(23771892)	+	MER61E	LTR/ERV1	1	612	(0)	1093110
437	32.4	9.5	2.6	chr13	90633696	90634004	(23730324)	+	MLT1H	LTR/ERVL-MaLR	63	401	(178)	1093168
2376	22.4	15.2	0.9	chr13	91368885	91369541	(22994787)	+	LTR41	LTR/ERVL	1	768	(0)	1094150
1739	24.2	4.1	4.0	chr13	91406364	91406893	(22957435)	+	LTR55	LTR/ERVL?	1	531	(17)	1094205
2158	18.4	2.9	2.2	chr13	100164145	100164595	(14199733)	C	MER65C	LTR/ERV1	(7)	454	1	1107508
3528	15.7	4.4	0.2	chr13	100594858	100595426	(13768902)	+	LTR27B	LTR/ERV1	1	594	(0)	1108193
3513	12.4	4.1	3.2	chr13	100799549	100799715	(13564613)	C	MER61E	LTR/ERV1	(413)	156	1	1108526
955	26.7	6.1	7.1	chr13	100799716	100799817	(13564511)	C	LTR37-int	LTR/ERV1	(508)	3552	3443	1108525
870	11.1	0.0	9.2	chr13	100799818	100800000	(13564328)	C	FLAM_C	SINE/Alu	(0)	143	1	1108528
2001	12.2	0.3	0.0	chr13	112090420	112090715	(2273613)	+	AluSx1	SINE/Alu	1	297	(15)	1123154
65	11.8	0.0	0.0	chr13	112090716	112090816	(2273512)	+	(GGAA)n	Simple_repeat	1	101	(0)	1123155
260	32.7	1.3	10.0	chr13	112090954	112091123	(2273205)	+	MER5A	DNA/hAT-Charlie	35	189	(0)	1123156
1933	15.8	3.2	1.5	chr14	20820191	20820707	(86223011)	C	MER61E	LTR/ERV1	(6)	563	1	1128665
468	16.4	5.4	7.6	chr14	20820713	20820844	(86222874)	C	LTR16A	LTR/ERVL	(309)	129	1	1128663
246	24.2	12.1	6.1	chr14	20820854	20820953	(86222765)	C	L1ME3G	LINE/L1	(458)	5666	5555	1128662
922	14.5	3.2	4.3	chr14	22471372	22471558	(84572160)	+	MER53	DNA/hAT	9	193	(0)	1131217
31	0.0	0.0	0.0	chr14	22489363	22489391	(84554327)	+	(TGCC)n	Simple_repeat	1	29	(0)	1131233
331	23.6	6.0	9.7	chr14	22611475	22611629	(84432089)	C	MIR3	SINE/MIR	(35)	173	25	1131406
16	17.7	0.0	2.5	chr14	23514064	23514103	(83529615)	+	(CTGGCA)n	Simple_repeat	1	40	(0)	1132987
277	17.6	10.8	8.6	chr14	24037631	24037711	(83006007)	C	MIR	SINE/MIR	(170)	98	16	1133671
8166	6.2	1.2	18.5	chr14	35823972	35825632	(71218086)	C	SVA_A	Retroposon/SVA	(18)	1369	1	1150695
1291	23.4	7.7	5.7	chr14	36375902	36376307	(70667411)	C	LTR16	LTR/ERVL	(3)	435	20	1151521
1602	19.2	4.8	0.4	chr14	38889921	38890080	(68153638)	C	AluJb	SINE/Alu	(22)	290	130	1154768
32	0.0	0.0	0.0	chr14	38890081	38890110	(68153608)	+	(T)n	Simple_repeat	1	30	(0)	1154769
1602	19.2	4.8	0.4	chr14	38890111	38890226	(68153492)	C	AluJb	SINE/Alu	(195)	117	2	1154768
232	17.1	0.0	0.0	chr14	38890474	38890514	(68153204)	+	MLT1K	LTR/ERVL-MaLR	199	239	(356)	1154770
467	13.2	2.4	0.0	chr14	43001435	43001517	(64042201)	+	MER61E	LTR/ERV1	1	85	(484)	1159995
12	19.3	4.7	2.2	chr14	46694973	46695015	(60348703)	+	(AATGAA)n	Simple_repeat	1	45	(0)	1164596
66	22.7	1.8	0.6	chr14	46695008	46695173	(60348545)	+	GA-rich	Low_complexity	1	169	(0)	1164597
512	16.9	1.1	0.0	chr14	48809295	48809374	(58234344)	+	MER67A	LTR/ERV1	1	81	(462)	1167163
1208	25.3	5.6	9.5	chr14	48809375	48810073	(58233645)	+	MER67B	LTR/ERV1	1	510	(4)	1167164
315	32.3	12.4	5.4	chr14	56724866	56725274	(50318444)	+	L2b	LINE/L2	2932	3373	(2)	1179634
49	2.1	0.0	0.0	chr14	56807966	56808014	(50235704)	+	(GCCCCGCA)n	Simple_repeat	1	49	(0)	1179762
4111	9.4	1.8	0.7	chr14	63565188	63565747	(43477971)	C	MER61E	LTR/ERV1	(3)	566	1	1189490
1492	7.7	0.0	2.0	chr14	63565748	63565791	(43477927)	+	L1PB1	LINE/L1	6107	6149	(2)	1189489
998	20.6	0.0	2.2	chr14	63565817	63565996	(43477722)	+	AluJo	SINE/Alu	122	297	(15)	1189491
21	20.1	3.0	2.9	chr14	64465366	64465431	(42578287)	+	(CCCCG)n	Simple_repeat	1	68	(0)	1191351
480	23.3	21.7	0.0	chr14	64618479	64618658	(42425060)	C	MIR	SINE/MIR	(0)	262	33	1191602
483	28.7	1.4	1.4	chr14	64618775	64618912	(42424806)	C	MIRc	SINE/MIR	(128)	140	3	1191603
1626	18.8	4.8	0.0	chr14	65223120	65223395	(41820323)	+	AluJb	SINE/Alu	1	290	(22)	1192683
197	30.3	1.5	0.0	chr14	69674259	69674324	(37369394)	+	L2a	LINE/L2	3359	3425	(1)	1199998
18	16.2	0.0	4.4	chr14	69674386	69674430	(37369288)	+	(CTTC)n	Simple_repeat	1	45	(0)	1199999
287	28.1	1.3	3.4	chr14	70904616	70904723	(36138995)	+	MIR	SINE/MIR	53	152	(78)	1201957
4184	9.0	1.8	0.4	chr14	71773997	71774553	(35269165)	+	MER61E	LTR/ERV1	1	565	(4)	1203305
13	18.9	4.5	2.2	chr14	72613387	72613430	(34430288)	+	(CTGC)n	Simple_repeat	1	46	(0)	1204539
2414	10.3	0.0	0.0	chr14	73607611	73607922	(33435796)	C	AluSq2	SINE/Alu	(0)	313	2	1206667
2297	11.5	0.0	0.0	chr14	73607927	73608222	(33435496)	C	AluSg4	SINE/Alu	(14)	296	1	1206668
4340	10.2	6.0	8.4	chr14	73608223	73608730	(33434988)	C	THE1C-int	LTR/ERVL-MaLR	(1083)	497	1	1206666
24	13.1	0.0	0.0	chr14	76047673	76047733	(30995985)	+	(CTGC)n	Simple_repeat	1	61	(0)	1211527
260	29.9	0.0	1.1	chr14	76047926	76048013	(30995705)	C	MIR3	SINE/MIR	(22)	186	100	1211528
246	30.4	6.2	7.4	chr14	76919602	76919779	(30123939)	C	MIR3	SINE/MIR	(79)	189	3	1213202
19	17.2	0.0	0.0	chr14	76919829	76919861	(30123857)	+	A-rich	Low_complexity	1	33	(0)	1213203
14	24.1	2.1	2.1	chr14	76919936	76919982	(30123736)	+	(GCG)n	Simple_repeat	1	48	(0)	1213204
501	26.3	1.4	4.2	chr14	76931847	76931989	(30111729)	+	MIR	SINE/MIR	90	228	(34)	1213235
203	32.4	13.3	1.8	chr14	76932014	76932352	(30111366)	+	L2c	LINE/L2	2685	3068	(351)	1213236
188	30.4	5.5	5.5	chr14	76932516	76932588	(30111130)	+	L2c	LINE/L2	3287	3359	(28)	1213236
19	7.8	4.5	4.3	chr14	77040280	77040323	(30003395)	+	GA-rich	Low_complexity	1	46	(0)	1213492
135	1.6	0.8	0.0	chr14	77269669	77269795	(29773923)	+	(TC)n	Simple_repeat	1	128	(0)	1213918
25	0.0	0.0	0.0	chr14	77269796	77269822	(29773896)	+	(C)n	Simple_repeat	1	27	(0)	1213919
529	28.8	2.5	2.5	chr14	77269823	77269979	(29773739)	C	MIR	SINE/MIR	(43)	219	63	1213920
497	26.3	12.6	4.9	chr14	77274116	77274319	(29769399)	+	MIRc	SINE/MIR	26	247	(21)	1213926
3602	9.7	2.3	0.8	chr14	79040549	79041070	(28002648)	C	MER61E	LTR/ERV1	(39)	530	1	1217189
273	28.6	1.4	0.0	chr14	79041083	79041152	(28002566)	+	MIR	SINE/MIR	37	107	(155)	1217190
190	33.6	13.4	0.9	chr14	79041196	79041306	(28002412)	+	MIRb	SINE/MIR	106	232	(36)	1217191
28	24.0	1.6	4.2	chr14	90300854	90300965	(16742753)	+	G-rich	Low_complexity	1	109	(0)	1233627
353	26.9	0.0	1.9	chr14	90426574	90426679	(16617039)	+	MLT1K	LTR/ERVL-MaLR	482	585	(10)	1233887
4248	10.8	7.4	3.0	chr14	90760985	90761678	(16282040)	+	LTR8A	LTR/ERV1	1	727	(0)	1234418
1511	25.2	5.4	6.6	chr14	90761913	90762400	(16281318)	C	LTR33A_	LTR/ERVL	(2)	529	48	1234419
643	27.0	12.1	5.4	chr14	95410316	95410777	(11632941)	+	MLT1J	LTR/ERVL-MaLR	1	497	(15)	1242962
2251	13.6	2.8	0.5	chr14	95532438	95532822	(11510896)	+	MER65A	LTR/ERV1	52	445	(0)	1243205
31	0.0	0.0	0.0	chr14	99420948	99420976	(7622742)	+	(G)n	Simple_repeat	1	29	(0)	1250017
2669	14.6	2.4	1.3	chr14	100190160	100190611	(6853107)	+	MER65C	LTR/ERV1	1	457	(4)	1251377
15	3.4	10.0	0.0	chr14	100372852	100372881	(6670837)	+	(CCTG)n	Simple_repeat	1	33	(0)	1251751
397	34.0	12.2	4.0	chr14	100372882	100373181	(6670537)	+	L2c	LINE/L2	3060	3387	(0)	1251752
1832	10.2	18.9	1.3	chr14	104235061	104235368	(2808350)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1258209
35	4.1	0.0	1.9	chr14	104235446	104235495	(2808223)	+	(GCCT)n	Simple_repeat	1	49	(0)	1258210
80	1.4	0.0	0.0	chr14	104235496	104235570	(2808148)	+	(CCTT)n	Simple_repeat	1	75	(0)	1258211
840	29.2	12.9	3.4	chr14	104235578	104236254	(2807464)	C	L2	LINE/L2	(971)	2448	1698	1258212
3664	21.5	5.0	2.6	chr14	104748812	104749690	(2294028)	+	MER54A	LTR/ERVL	1	901	(0)	1258773
675	10.6	1.7	0.9	chr14	104749771	104749884	(2293834)	C	MER66C	LTR/ERV1	(14)	541	427	1258774
1082	24.2	3.0	1.4	chr14	105013818	105014110	(2029608)	+	L1MD2	LINE/L1	5635	5932	(427)	1259091
1635	30.5	3.9	4.2	chr15	34591051	34591537	(67399652)	+	L2	LINE/L2	2272	2769	(650)	1283076
33	0.0	0.0	0.0	chr15	34591632	34591662	(67399527)	+	(CCTG)n	Simple_repeat	1	31	(0)	1283078
2269	11.9	0.7	0.7	chr15	34591750	34592059	(67399130)	C	AluSg	SINE/Alu	(0)	310	1	1283079
46	18.7	0.0	0.0	chr15	37100238	37100328	(64890861)	+	(TCTC)n	Simple_repeat	1	91	(0)	1286510
373	33.6	0.7	0.7	chr15	43977726	43977863	(58013326)	C	HERV9NC-int	LTR/ERV1	(423)	5695	5558	1297970
2221	19.5	9.3	12.1	chr15	44841246	44841396	(57149793)	C	L1ME2z	LINE/L1	(616)	5828	5726	1299652
943	12.5	0.0	0.7	chr15	44841443	44841579	(57149610)	C	AluJb	SINE/Alu	(5)	307	172	1299655
2783	19.1	7.5	3.5	chr15	44841580	44842204	(57148985)	+	MER61F	LTR/ERV1	2	653	(23)	1299656
2831	16.7	9.9	2.8	chr15	45048640	45049244	(56941945)	C	MER61F	LTR/ERV1	(23)	653	1	1299989
12225	14.8	1.6	3.5	chr15	45049247	45050086	(56941103)	C	LTR25-int	LTR/ERV1	(1)	7187	6359	1299989
2558	18.5	8.1	4.2	chr15	45058594	45059218	(56931971)	C	MER61F	LTR/ERV1	(23)	653	2	1299989
930	15.8	0.0	0.7	chr15	45059219	45059357	(56931832)	+	AluJb	SINE/Alu	172	309	(3)	1299995
2580	19.1	9.4	4.4	chr15	45059396	45059504	(56931685)	+	L1ME2z	LINE/L1	5726	5828	(616)	1299996
1654	16.5	3.8	3.8	chr15	45059505	45059795	(56931394)	C	AluJr	SINE/Alu	(21)	291	1	1299997
318	33.6	2.5	0.0	chr15	45696239	45696357	(56294832)	+	MIR	SINE/MIR	2	123	(139)	1301206
1083	17.8	0.0	0.0	chr15	45696358	45696531	(56294658)	C	AluSx3	SINE/Alu	(10)	301	128	1301207
58	8.0	0.0	0.0	chr15	45696536	45696614	(56294575)	+	(CCTG)n	Simple_repeat	1	79	(0)	1301208
1592	14.2	5.2	0.0	chr15	45696622	45696860	(56294329)	C	AluSx1	SINE/Alu	(5)	307	56	1301209
344	19.3	1.2	1.4	chr15	53116866	53117586	(48873603)	+	(TTTC)n	Simple_repeat	1	730	(0)	1312316
1772	19.6	3.9	3.9	chr15	56734077	56734537	(45256652)	C	MER65C	LTR/ERV1	(0)	461	1	1317507
5716	7.2	1.8	1.3	chr15	59608980	59609756	(42381433)	+	MER4E1	LTR/ERV1	1	781	(0)	1322447
292	20.6	5.6	8.9	chr15	59609757	59609836	(42381353)	C	L2b	LINE/L2	(32)	3343	3263	1322446
16	29.3	0.0	0.0	chr15	59610146	59610196	(42380993)	+	(CCTC)n	Simple_repeat	1	51	(0)	1322448
87	4.1	1.0	1.0	chr15	59610198	59610300	(42380889)	+	(CCTT)n	Simple_repeat	1	104	(0)	1322449
16	10.0	2.9	2.8	chr15	59610357	59610391	(42380798)	+	(TTTCTT)n	Simple_repeat	1	36	(0)	1322450
256	25.1	5.1	3.4	chr15	59610392	59611367	(42379822)	+	(TTCC)n	Simple_repeat	4	1066	(0)	1322451
60	0.0	0.0	4.5	chr15	63470777	63470843	(38520346)	+	(GAAG)n	Simple_repeat	1	67	(0)	1328630
25	20.0	0.0	1.7	chr15	63470844	63470894	(38520295)	+	(AGGC)n	Simple_repeat	1	50	(0)	1328631
2289	11.2	0.0	0.0	chr15	63470895	63471190	(38519999)	+	AluSx	SINE/Alu	7	302	(10)	1328632
2225	12.2	0.7	0.0	chr15	66749178	66749480	(35241709)	+	AluSq2	SINE/Alu	1	305	(8)	1335385
1629	16.1	5.7	1.8	chr15	66749481	66749628	(35241561)	+	AluJb	SINE/Alu	134	297	(15)	1335384
538	31.8	13.7	4.1	chr15	66983344	66984043	(35007146)	+	L2c	LINE/L2	2604	3387	(0)	1335824
297	37.1	5.0	1.9	chr15	70465569	70465722	(31525467)	+	L3	LINE/CR1	3936	4094	(5)	1342199
1471	35.3	12.2	2.8	chr15	70553305	70555109	(31436080)	C	L2c	LINE/L2	(687)	2732	735	1342357
2212	10.3	0.7	0.0	chr15	71790884	71791197	(30199992)	C	AluSx1	SINE/Alu	(0)	312	1	1344372
312	21.1	5.0	1.3	chr15	71791344	71791420	(30199769)	C	MLT1H1	LTR/ERVL-MaLR	(426)	129	50	1344371
3736	11.7	1.9	3.3	chr15	73165573	73166145	(28825044)	C	MER61E	LTR/ERV1	(4)	565	1	1346713
887	20.5	3.4	1.0	chr15	73166150	73166351	(28824838)	+	L1M3	LINE/L1	5438	5644	(539)	1346714
4745	13.8	3.7	0.4	chr15	73166352	73166878	(28824311)	C	LTR39	LTR/ERV1	(0)	783	233	1346715
2823	10.4	0.9	2.6	chr15	74358935	74359387	(27631802)	+	HERVH-int	LTR/ERV1	7269	7713	(0)	1348699
2708	9.3	11.6	0.2	chr15	74359388	74359784	(27631405)	+	LTR7	LTR/ERV1	1	448	(2)	1348699
2090	18.8	9.4	2.8	chr15	74359786	74360275	(27630914)	+	MER41-int	LTR/ERV1	2816	3327	(4489)	1348700
1721	19.8	1.3	1.6	chr15	76872968	76873270	(25117919)	+	AluJr	SINE/Alu	1	302	(10)	1353147
67	0.0	0.0	0.0	chr15	76873275	76873334	(25117855)	+	(AAGG)n	Simple_repeat	1	60	(0)	1353148
47	0.0	0.0	0.0	chr15	76873335	76873388	(25117801)	+	(CAGG)n	Simple_repeat	1	54	(0)	1353149
2787	23.8	12.3	5.1	chr15	76873448	76873883	(25117306)	+	L1MEg	LINE/L1	2364	2872	(3274)	1353146
18	19.5	0.0	0.0	chr15	77417440	77417474	(24573715)	+	G-rich	Low_complexity	1	35	(0)	1354016
290	22.8	10.5	0.4	chr15	78055765	78055862	(23935327)	C	L2b	LINE/L2	(0)	3426	3288	1355107
226	23.9	25.3	0.0	chr15	78056033	78056141	(23935048)	+	L2a	LINE/L2	3281	3426	(0)	1355108
12	12.2	3.7	0.0	chr15	78056142	78056168	(23935021)	+	(GAAT)n	Simple_repeat	1	28	(0)	1355109
16	22.3	2.0	2.0	chr15	78149437	78149485	(23841704)	+	(GCAG)n	Simple_repeat	1	50	(0)	1355315
737	21.5	3.4	3.4	chr15	79340406	79340583	(22650606)	+	MLT1F	LTR/ERVL-MaLR	371	548	(0)	1357699
2527	5.0	0.7	0.0	chr15	79925119	79925416	(22065773)	C	AluYk2	SINE/Alu	(11)	300	1	1358603
1988	10.9	4.5	0.0	chr15	80094784	80095059	(21896130)	C	AluSq2	SINE/Alu	(11)	302	14	1358973
2358	21.7	7.0	3.4	chr15	80095060	80095572	(21895617)	C	L1MC4	LINE/L1	(343)	7699	7179	1358972
203	34.9	5.7	2.4	chr15	80150794	80150878	(21840311)	+	L2b	LINE/L2	3246	3333	(42)	1359069
211	28.1	7.2	0.0	chr15	80150930	80150993	(21840196)	C	L2b	LINE/L2	(13)	3362	3294	1359070
37	5.8	1.8	1.8	chr15	82197862	82197917	(19793272)	+	(TGCC)n	Simple_repeat	1	57	(0)	1362525
265	20.5	19.2	16.4	chr15	82836640	82836785	(19154404)	+	MLT1M	LTR/ERVL-MaLR	161	311	(361)	1363547
2372	16.2	8.8	1.9	chr15	82836899	82837363	(19153826)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	6	1363548
284	27.6	13.6	4.3	chr15	83559764	83559903	(18431286)	+	MIRc	SINE/MIR	63	217	(51)	1364806
1214	20.2	16.8	2.1	chr15	84899240	84899756	(17091433)	+	L1MEc	LINE/L1	1178	1785	(4617)	1366851
807	20.2	0.6	0.0	chr15	84899757	84899914	(17091275)	+	AluJb	SINE/Alu	147	305	(7)	1366852
16	9.4	2.7	2.6	chr15	84899919	84899940	(17091249)	+	(GAAA)n	Simple_repeat	1	22	(0)	1366853
50	2.0	0.0	0.0	chr15	84899941	84899990	(17091199)	+	(AAGG)n	Simple_repeat	1	50	(0)	1366854
26	0.0	0.0	0.0	chr15	84899998	84900022	(17091167)	+	(AGGC)n	Simple_repeat	1	25	(0)	1366855
1889	14.9	0.0	4.0	chr15	84900035	84900357	(17090832)	+	AluSz6	SINE/Alu	1	310	(2)	1366856
2407	18.2	0.9	1.1	chr15	88389069	88389528	(13601661)	C	MER65C	LTR/ERV1	(2)	459	1	1372310
672	23.9	2.8	5.4	chr15	88389529	88389563	(13601626)	+	MIRb	SINE/MIR	216	246	(22)	1372309
543	27.6	3.5	6.1	chr15	89244685	89244915	(12746274)	+	MIRb	SINE/MIR	27	251	(17)	1373901
185	17.6	0.0	0.0	chr15	89416224	89416257	(12574932)	+	L2b	LINE/L2	3339	3372	(3)	1374164
306	15.9	0.4	0.0	chr15	89474702	89475228	(12515961)	+	(CCTT)n	Simple_repeat	1	529	(0)	1374270
2114	12.1	2.2	3.2	chr15	89475231	89475545	(12515644)	C	AluSx	SINE/Alu	(0)	312	1	1374271
14	12.2	2.4	7.1	chr15	89751232	89751272	(12239917)	+	(GGC)n	Simple_repeat	1	42	(0)	1374804
704	23.7	6.9	4.9	chr15	91579174	91579399	(10411790)	C	LTR67B	LTR/ERVL	(387)	233	3	1378504
552	28.1	6.5	6.5	chr15	91806558	91806820	(10184369)	C	L2a	LINE/L2	(0)	3426	3164	1378899
354	39.0	4.6	1.6	chr15	91806874	91807126	(10184063)	C	L3	LINE/CR1	(45)	4054	3794	1378900
252	32.0	2.3	2.3	chr15	92602159	92602289	(9388900)	+	L1M6	LINE/L1	720	850	(5646)	1380090
545	24.6	0.0	3.9	chr15	92602428	92602554	(9388635)	+	L2a	LINE/L2	3305	3426	(0)	1380091
183	21.4	3.5	9.7	chr15	93283329	93283390	(8707799)	+	OldhAT1	DNA/hAT-Ac	1009	1066	(1782)	1381374
405	13.0	0.0	0.0	chr15	95773795	95773848	(6217341)	+	AluSz	SINE/Alu	37	90	(222)	1384913
1721	12.4	0.4	4.3	chr15	95773849	95774106	(6217083)	+	AluSx1	SINE/Alu	40	287	(25)	1384914
33	2.9	0.0	0.0	chr15	95774108	95774142	(6217047)	+	(CAA)n	Simple_repeat	1	35	(0)	1384915
361	25.3	11.1	3.6	chr15	96054468	96054615	(5936574)	C	MIR3	SINE/MIR	(33)	175	19	1385306
544	34.5	7.8	10.6	chr15	98677237	98677449	(3313740)	C	L1ME4a	LINE/L1	(1792)	4354	4161	1389025
283	31.3	9.3	5.8	chr15	98677461	98677738	(3313451)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	224	1389030
2594	22.9	9.6	3.8	chr15	99497288	99497819	(2493370)	C	L1ME2	LINE/L1	(343)	5821	5260	1390206
274	25.6	2.3	1.1	chr15	101136233	101136319	(854870)	+	MIRb	SINE/MIR	181	268	(0)	1392376
320	29.8	1.1	0.0	chr15	101137023	101137116	(854073)	+	MIRc	SINE/MIR	81	175	(93)	1392377
626	25.1	9.1	3.9	chr15	101198718	101198924	(792265)	+	MER58A	DNA/hAT-Charlie	1	219	(5)	1392465
2478	8.7	0.0	0.0	chr15	101199222	101199530	(791659)	+	AluSc8	SINE/Alu	1	309	(2)	1392466
24	9.9	8.1	6.2	chr15	101766319	101766392	(224797)	+	(CT)n	Simple_repeat	1	80	(0)	1393237
2416	11.5	13.5	2.6	chr16	278988	279415	(90058930)	+	MER51E	LTR/ERV1	1	482	(0)	1394518
464	31.2	4.2	0.5	chr16	1025755	1025960	(89312385)	C	MER2	DNA/TcMar-Tigger	(130)	215	2	1395420
198	25.0	6.4	7.4	chr16	1092180	1092274	(89246071)	+	L2b	LINE/L2	3263	3356	(19)	1395493
635	0.0	0.0	0.0	chr16	3184131	3184204	(87154141)	C	tRNA-Pro-CCA	tRNA	(1)	74	1	1398679
18	3.8	3.7	0.0	chr16	3184218	3184244	(87154101)	+	(TGT)n	Simple_repeat	1	28	(0)	1398680
635	0.0	0.0	0.0	chr16	3188094	3188167	(87150178)	+	tRNA-Pro-CCA	tRNA	1	74	(1)	1398693
319	31.4	4.5	0.9	chr16	4137577	4137682	(86200663)	+	L1MEd	LINE/L1	1979	2088	(4998)	1400517
397	20.0	10.3	4.5	chr16	4945137	4945246	(85393099)	C	MamRep38	DNA/hAT	(21)	274	158	1402200
295	27.7	2.5	5.7	chr16	4956393	4956590	(85381755)	C	L2c	LINE/L2	(14)	3361	3217	1402237
247	7.3	8.9	0.0	chr16	4956702	4956742	(85381603)	+	L2b	LINE/L2	3331	3375	(0)	1402238
14	11.9	2.4	7.0	chr16	11796979	11797020	(78541325)	+	(GCCCCC)n	Simple_repeat	1	43	(0)	1416499
23	17.5	6.9	0.0	chr16	11797030	11797087	(78541258)	+	(CG)n	Simple_repeat	1	62	(0)	1416500
36	25.6	1.2	7.0	chr16	11797137	11797305	(78541040)	+	(GCG)n	Simple_repeat	1	171	(0)	1416501
2459	26.0	17.1	10.8	chr16	14236805	14238051	(76100294)	C	L2a	LINE/L2	(628)	2791	1381	1421711
297	29.8	3.4	4.8	chr16	14507792	14507999	(75830346)	+	L1ME4c	LINE/L1	475	679	(151)	1422298
17	16.2	0.0	2.6	chr16	14508170	14508189	(75830156)	+	(AGGC)n	Simple_repeat	1	20	(0)	1422299
29	7.7	0.0	0.0	chr16	14508190	14508230	(75830115)	+	(AGAT)n	Simple_repeat	1	41	(0)	1422300
17	16.2	0.0	2.6	chr16	14508231	14508247	(75830098)	+	(AGGC)n	Simple_repeat	1	17	(0)	1422301
817	17.1	0.0	2.4	chr16	14508248	14508370	(75829975)	+	AluJr	SINE/Alu	1	120	(192)	1422302
2107	10.3	0.6	3.7	chr16	19690670	19690990	(70647355)	+	AluSx1	SINE/Alu	1	311	(1)	1434125
226	23.8	8.7	11.0	chr16	19690991	19691061	(70647284)	+	MIRb	SINE/MIR	164	232	(36)	1434124
258	22.4	20.3	1.0	chr16	19705055	19705153	(70633192)	+	MLT1L	LTR/ERVL-MaLR	252	374	(236)	1434150
54	0.0	0.0	0.0	chr16	23026350	23026395	(67311950)	+	(GT)n	Simple_repeat	1	46	(0)	1441321
371	32.2	0.0	0.0	chr16	23026625	23026739	(67311606)	+	MIRb	SINE/MIR	113	227	(41)	1441322
1983	11.9	4.7	0.7	chr16	27993150	27993435	(62344910)	C	AluSx3	SINE/Alu	(13)	298	1	1452416
288	28.6	7.0	3.2	chr16	27993449	27993571	(62344774)	+	L3	LINE/CR1	3773	3900	(199)	1452417
4200	8.9	1.1	0.2	chr16	27993630	27994189	(62344156)	+	MER61E	LTR/ERV1	1	565	(4)	1452418
2262	10.9	0.0	0.7	chr16	28862927	28863230	(61475115)	C	AluSx	SINE/Alu	(10)	302	1	1454613
13	16.5	0.0	0.0	chr16	28863250	28863276	(61475069)	+	(CCA)n	Simple_repeat	1	27	(0)	1454614
13	29.6	0.0	0.0	chr16	28863277	28863294	(61475051)	+	(CCCACC)n	Simple_repeat	2	46	(0)	1454615
1522	19.6	5.7	0.0	chr16	30389817	30390120	(59948225)	C	AluJr	SINE/Alu	(0)	312	1	1457911
241	29.5	1.1	3.6	chr16	30390303	30390386	(59947959)	+	L2b	LINE/L2	3308	3387	(0)	1457912
2356	7.2	0.3	3.4	chr16	30390399	30390601	(59947744)	C	AluSc8	SINE/Alu	(1)	310	109	1457913
2125	12.2	1.0	1.6	chr16	30504735	30505038	(59833307)	+	AluSz6	SINE/Alu	1	302	(10)	1458233
13	22.6	0.0	0.0	chr16	30896871	30896906	(59441439)	+	G-rich	Low_complexity	1	36	(0)	1459128
229	33.2	17.2	4.5	chr16	30937266	30937552	(59400793)	+	L2b	LINE/L2	3034	3364	(11)	1459242
221	29.1	19.1	1.6	chr16	30937613	30937741	(59400604)	C	L2c	LINE/L2	(215)	3172	3016	1459243
1773	19.3	0.0	1.9	chr16	31103009	31103324	(59235021)	+	AluJr	SINE/Alu	1	310	(2)	1459609
926	16.9	0.7	0.7	chr16	31103335	31103488	(59234857)	+	AluJo	SINE/Alu	139	292	(20)	1459610
29	0.0	0.0	0.0	chr16	31103565	31103600	(59234745)	+	(CTCTCC)n	Simple_repeat	1	36	(0)	1459611
4945	9.4	2.4	4.9	chr16	31103602	31104750	(59233595)	+	SVA_D	Retroposon/SVA	2	866	(520)	1459612
719	29.3	7.0	3.1	chr16	31451467	31451755	(58886590)	C	L1MC4	LINE/L1	(1281)	6761	6461	1460346
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
404	19.2	1.4	0.0	chr16	34062434	34062506	(56275839)	+	AluSz6	SINE/Alu	225	298	(14)	1463557
316	25.0	0.0	0.0	chr16	34062726	34062789	(56275556)	+	AluYa8	SINE/Alu	223	286	(24)	1463558
390	15.6	3.0	0.0	chr16	34062893	34062956	(56275389)	+	AluYj4	SINE/Alu	224	289	(22)	1463559
377	20.6	0.0	0.0	chr16	34063794	34063861	(56274484)	+	AluYj4	SINE/Alu	224	291	(20)	1463563
330	24.4	1.2	2.4	chr16	34071698	34071779	(56266566)	+	AluJb	SINE/Alu	208	288	(24)	1463578
35	0.0	0.0	0.0	chr16	47027235	47027275	(43311070)	+	(GCCT)n	Simple_repeat	1	41	(0)	1466577
58	1.6	0.0	3.0	chr16	47027276	47027341	(43311004)	+	(CCTT)n	Simple_repeat	1	66	(0)	1466578
2045	13.2	2.9	0.3	chr16	47027344	47027647	(43310698)	C	AluSx1	SINE/Alu	(0)	312	1	1466579
74	16.4	5.5	4.4	chr16	49842229	49842445	(40495900)	+	GA-rich	Low_complexity	1	219	(0)	1471220
1101	28.6	5.3	2.6	chr16	49842448	49842464	(40495881)	+	L1ME3G	LINE/L1	113	131	(793)	1471221
790	18.4	0.0	4.4	chr16	49842465	49842600	(40495745)	+	AluJo	SINE/Alu	1	130	(182)	1471222
1101	28.6	5.3	2.6	chr16	49842601	49842693	(40495652)	+	L1ME3G	LINE/L1	132	231	(693)	1471221
811	19.5	6.1	10.7	chr16	54077942	54078165	(36260180)	+	Zaphod3	DNA/hAT-Tip100	2	214	(2409)	1478861
343	29.0	2.1	0.0	chr16	54270892	54270984	(36067361)	+	MLT1O	LTR/ERVL-MaLR	110	204	(338)	1479194
324	22.8	15.6	0.0	chr16	54271169	54271260	(36067085)	+	MIR	SINE/MIR	154	262	(0)	1479195
20	23.8	3.6	3.5	chr16	56191467	56191550	(34146795)	+	(TCCCTC)n	Simple_repeat	1	87	(0)	1482660
32	20.2	1.3	1.3	chr16	56191748	56191823	(34146522)	+	(CCG)n	Simple_repeat	1	77	(0)	1482661
2674	16.4	2.9	0.9	chr16	65770243	65770709	(24567636)	+	MER31A	LTR/ERV1	1	477	(8)	1498486
3968	12.1	1.1	0.0	chr16	65770886	65771432	(24566913)	+	MER61E	LTR/ERV1	1	553	(16)	1498487
413	30.5	21.0	0.4	chr16	66752802	66753363	(23584982)	+	L3	LINE/CR1	2644	3352	(747)	1500341
1944	11.8	0.0	4.5	chr16	66753393	66753680	(23584665)	+	AluSz6	SINE/Alu	1	275	(37)	1500342
1741	7.0	0.5	0.5	chr16	67577137	67577349	(22760996)	+	AluY	SINE/Alu	1	213	(98)	1501935
16	0.0	0.0	0.0	chr16	67577358	67577374	(22760971)	+	(A)n	Simple_repeat	1	17	(0)	1501936
2386	7.3	0.0	3.2	chr16	67577433	67577746	(22760599)	C	AluY	SINE/Alu	(7)	304	1	1501937
183	31.4	8.7	2.8	chr16	68020140	68020247	(22318098)	+	MER5B	DNA/hAT-Charlie	2	116	(62)	1502770
20	6.5	0.0	2.9	chr16	73096162	73096195	(17242150)	+	(CTGC)n	Simple_repeat	1	34	(0)	1512405
2000	13.1	0.3	4.5	chr16	73096403	73096714	(17241631)	C	AluSz	SINE/Alu	(12)	300	2	1512406
21	25.3	0.0	3.2	chr16	73573959	73574021	(16764324)	+	(TCCT)n	Simple_repeat	1	63	(0)	1513196
12	20.4	0.0	0.0	chr16	73912797	73912825	(16425520)	+	(TTTA)n	Simple_repeat	1	29	(0)	1513719
188	23.9	0.7	0.0	chr16	73912828	73913249	(16425096)	+	(ACCT)n	Simple_repeat	1	425	(0)	1513720
2192	11.2	1.0	0.0	chr16	75018884	75019178	(15319167)	+	AluSz	SINE/Alu	1	298	(14)	1515944
719	18.1	5.7	0.0	chr16	75019222	75019337	(15319008)	C	AluJr	SINE/Alu	(187)	125	3	1515945
2115	15.2	10.2	1.7	chr16	75600480	75600900	(14737445)	+	MER65C	LTR/ERV1	1	461	(0)	1517134
385	30.6	6.0	2.7	chr16	80824436	80824660	(9513685)	+	L1M6	LINE/L1	3111	3343	(3057)	1525942
15	18.9	2.3	2.2	chr16	80824665	80824708	(9513637)	+	A-rich	Low_complexity	1	45	(0)	1525949
1931	15.6	1.7	0.0	chr16	81732256	81732543	(8605802)	C	AluJr	SINE/Alu	(17)	295	3	1527887
12	17.0	2.2	6.5	chr16	81732810	81732854	(8605491)	+	(CCCCCTG)n	Simple_repeat	1	46	(0)	1527888
918	7.4	0.8	0.0	chr16	83926905	83927025	(6411320)	+	AluSc	SINE/Alu	186	307	(2)	1531859
263	25.5	7.3	3.8	chr16	85349935	85350040	(4988305)	C	L2b	LINE/L2	(20)	3355	3246	1534687
309	25.9	9.8	4.8	chr16	85349972	85350157	(4988188)	+	MIRb	SINE/MIR	35	246	(22)	1534688
274	35.4	3.4	7.1	chr16	85350158	85350312	(4988033)	C	MIRc	SINE/MIR	(93)	175	27	1534689
5995	26.5	7.3	6.9	chr16	86254735	86257345	(4081000)	C	L1MDa	LINE/L1	(3996)	2637	15	1536329
34	2.5	2.5	0.0	chr16	86512680	86512719	(3825626)	+	(CAGG)n	Simple_repeat	1	41	(0)	1536787
233	32.8	3.7	5.5	chr16	87560069	87560195	(2778150)	+	MIRb	SINE/MIR	117	253	(9)	1538666
628	16.8	0.7	0.0	chr16	88246741	88247851	(2090494)	+	(GTGA)n	Simple_repeat	1	1119	(0)	1539729
246	25.0	5.5	0.0	chr16	88247856	88247923	(2090422)	+	MLT1G	LTR/ERVL-MaLR	380	451	(140)	1539730
29	3.2	0.0	0.0	chr16	89565284	89565315	(773030)	+	(TGGGC)n	Simple_repeat	1	32	(0)	1541486
719	11.3	0.9	0.8	chr16	89817057	89817172	(521173)	+	FLAM_C	SINE/Alu	6	117	(16)	1541909
2513	6.7	0.0	0.6	chr16	89817173	89817485	(520860)	C	AluSx	SINE/Alu	(0)	312	2	1541910
63	8.3	5.7	2.3	chr17	662713	662834	(82594607)	+	A-rich	Low_complexity	1	129	(0)	1545540
62	1.7	0.0	0.0	chr17	662835	662894	(82594547)	+	(AAGG)n	Simple_repeat	1	60	(0)	1545541
25	0.0	0.0	0.0	chr17	662895	662925	(82594516)	+	(CAGG)n	Simple_repeat	1	31	(0)	1545542
1913	14.8	1.7	0.0	chr17	662935	663218	(82594223)	+	AluJb	SINE/Alu	11	299	(13)	1545543
189	32.2	5.6	6.3	chr17	1115308	1115433	(82142008)	+	L2b	LINE/L2	3013	3137	(238)	1546377
508	28.1	10.9	3.6	chr17	1130588	1131020	(82126421)	+	MLT1C	LTR/ERVL-MaLR	6	505	(0)	1546401
436	34.3	13.3	6.5	chr17	1289386	1290295	(81967146)	+	L2	LINE/L2	1917	2901	(518)	1546776
12	19.3	4.7	2.2	chr17	1649911	1649953	(81607488)	+	G-rich	Low_complexity	1	45	(0)	1547529
2250	9.6	0.0	0.0	chr17	2954611	2954891	(80302550)	C	AluSg	SINE/Alu	(29)	281	1	1550322
2554	19.7	3.1	0.7	chr17	2954897	2955590	(80301851)	C	L1MB5	LINE/L1	(284)	5890	5182	1550323
1893	13.0	4.8	1.3	chr17	3923256	3923554	(79333887)	+	AluSx	SINE/Alu	1	310	(2)	1552020
13	5.6	15.8	0.0	chr17	3923758	3923795	(79333646)	+	G-rich	Low_complexity	1	44	(0)	1552021
890	13.1	7.4	0.0	chr17	8247012	8247148	(75010293)	C	AluSx	SINE/Alu	(30)	282	135	1560401
2406	8.2	1.0	0.0	chr17	8247306	8247608	(75009833)	C	AluSz	SINE/Alu	(6)	306	1	1560402
339	32.4	9.6	4.9	chr17	8384929	8385194	(74872247)	C	L2a	LINE/L2	(9)	3417	3108	1560703
20	27.8	1.1	5.2	chr17	8385385	8385479	(74871962)	+	(CCTT)n	Simple_repeat	1	96	(0)	1560704
2164	10.1	0.0	3.6	chr17	8385627	8385933	(74871508)	+	AluSz6	SINE/Alu	1	296	(16)	1560705
2539	21.6	9.3	3.6	chr17	9386061	9386470	(73870971)	+	L1ME2	LINE/L1	6493	6910	(114)	1562599
31	18.3	2.6	1.3	chr17	9386522	9386597	(73870844)	+	(AGGC)n	Simple_repeat	1	78	(0)	1562608
286	32.3	9.5	4.8	chr17	9386615	9386845	(73870596)	C	L3	LINE/CR1	(2)	4097	3855	1562609
1246	10.6	0.0	0.0	chr17	9386857	9387016	(73870425)	C	AluSq	SINE/Alu	(0)	313	154	1562610
1835	18.3	0.0	3.4	chr17	10205200	10205522	(73051919)	+	AluJr	SINE/Alu	1	312	(0)	1564257
2083	23.4	10.1	6.1	chr17	10205523	10205617	(73051824)	+	L1ME3A	LINE/L1	5825	5917	(256)	1564256
3993	10.9	0.9	3.1	chr17	10205618	10206195	(73051246)	+	MER61E	LTR/ERV1	1	565	(4)	1564258
16	18.9	0.0	0.0	chr17	15999349	15999378	(67258063)	+	(T)n	Simple_repeat	1	30	(0)	1574053
2142	13.7	8.3	4.9	chr17	16267014	16267443	(66989998)	C	Tigger2	DNA/TcMar-Tigger	(0)	2718	2273	1574565
481	7.4	2.9	1.4	chr17	16267433	16267501	(66989940)	C	MER8	DNA/TcMar-Tigger	(169)	70	1	1574566
948	19.1	5.4	0.0	chr17	16267558	16267714	(66989727)	+	FRAM	SINE/Alu	1	166	(10)	1574567
240	31.8	0.0	0.0	chr17	17303051	17303113	(65954328)	+	L2b	LINE/L2	3238	3300	(75)	1576398
21	26.2	4.5	1.1	chr17	17303357	17303444	(65953997)	+	(CGCGCGC)n	Simple_repeat	1	92	(0)	1576399
251	24.0	18.8	0.8	chr17	20110644	20110765	(63146676)	C	L2a	LINE/L2	(0)	3426	3278	1581958
1346	23.9	3.2	6.3	chr17	20158415	20158753	(63098688)	C	ERV3-16A3_LTR	LTR/ERVL	(108)	354	52	1582057
1589	18.9	2.3	4.5	chr17	20158754	20158947	(63098494)	C	AluJb	SINE/Alu	(5)	307	120	1582058
453	21.4	15.9	4.4	chr17	21043779	21043983	(62213458)	C	Charlie5	DNA/hAT-Charlie	(24)	2600	2368	1583518
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
1545	18.6	0.5	0.9	chr17	26935986	26936392	(56321049)	+	(GAATG)n	Satellite	1	409	(0)	1585984
256	27.6	0.0	3.3	chr17	27446699	27446788	(55810653)	+	MamTip1	DNA/hAT-Tip100	165	251	(16)	1586808
443	31.6	9.9	2.2	chr17	27446974	27447196	(55810245)	C	MIRb	SINE/MIR	(24)	244	3	1586809
18	6.8	3.2	0.0	chr17	27456279	27456309	(55801132)	+	(GGGAG)n	Simple_repeat	1	32	(0)	1586829
13	4.3	3.9	3.7	chr17	29180178	29180203	(54077238)	+	(AGG)n	Simple_repeat	1	27	(0)	1590036
17	13.9	0.0	6.7	chr17	29180394	29180438	(54077003)	+	(AGCGC)n	Simple_repeat	1	45	(0)	1590037
391	22.8	2.1	0.0	chr17	29505234	29505325	(53752116)	C	L1ME2	LINE/L1	(18)	6146	6053	1590823
582	18.3	0.0	1.1	chr17	29505326	29505419	(53752022)	C	MER2	DNA/TcMar-Tigger	(0)	345	253	1590824
2379	9.6	0.0	0.0	chr17	29505420	29505721	(53751720)	+	AluSq2	SINE/Alu	1	302	(11)	1590825
13	25.6	2.6	6.2	chr17	35460662	35460739	(47796702)	+	(CCCGC)n	Simple_repeat	1	80	(0)	1602241
1780	15.3	10.5	3.7	chr17	35460854	35461261	(47796180)	C	L1MDa	LINE/L1	(3117)	3420	2982	1602242
4192	18.2	4.3	4.7	chr17	36125134	36126116	(47131325)	C	LTR28C	LTR/ERV1	(282)	1473	1	1603434
2383	7.5	0.0	0.3	chr17	37840903	37841195	(45416246)	C	AluY	SINE/Alu	(14)	297	6	1606652
697	17.1	1.8	0.0	chr17	37841231	37841341	(45416100)	+	AluSx3	SINE/Alu	188	300	(11)	1606653
43	4.3	0.0	0.0	chr17	37841342	37841389	(45416052)	+	(AAGG)n	Simple_repeat	1	48	(0)	1606654
595	23.0	8.8	0.0	chr17	37841409	37841543	(45415898)	C	LTR16C	LTR/ERVL	(51)	438	291	1606655
339	32.1	17.8	2.3	chr17	38503077	38503377	(44754064)	C	L2a	LINE/L2	(1630)	1789	1419	1607987
310	30.2	17.2	2.8	chr17	41864167	41864702	(41392739)	+	L2b	LINE/L2	2728	3358	(17)	1614461
15	17.9	3.0	7.3	chr17	41864751	41864816	(41392625)	+	(GCCCTCC)n	Simple_repeat	1	68	(0)	1614462
237	33.2	8.2	5.3	chr17	42390163	42390388	(40867053)	C	MIRc	SINE/MIR	(19)	249	17	1615522
1812	10.5	1.2	0.8	chr17	42390688	42390775	(40866666)	+	AluSx3	SINE/Alu	44	132	(179)	1615523
301	21.1	8.8	11.9	chr17	43232365	43232482	(40024959)	+	MER96B	DNA/hAT-Tip100	1	114	(303)	1617360
2018	19.7	0.5	1.4	chr17	43232486	43232908	(40024533)	+	LTR13	LTR/ERVK	1	419	(588)	1617361
360	23.6	0.9	9.4	chr17	43670874	43670990	(39586451)	C	MIR3	SINE/MIR	(48)	160	54	1618370
487	25.4	7.9	5.4	chr17	43671089	43671309	(39586132)	C	MIRc	SINE/MIR	(18)	250	24	1618371
623	28.5	3.5	0.0	chr17	43671387	43671607	(39585834)	C	Tigger14a	DNA/TcMar-Tigger	(34)	290	62	1618372
755	12.0	11.5	11.8	chr17	44162584	44162611	(39094830)	C	L1MC3	LINE/L1	(0)	7785	7757	1619365
2255	7.6	0.0	3.3	chr17	44162612	44162912	(39094529)	C	AluY	SINE/Alu	(20)	291	1	1619366
25	24.9	2.9	3.8	chr17	45148492	45148593	(38108848)	+	GA-rich	Low_complexity	1	105	(0)	1621434
14	16.4	2.9	0.0	chr17	45148579	45148612	(38108829)	+	(GAGCA)n	Simple_repeat	1	35	(0)	1621435
34	16.7	3.0	0.0	chr17	45293794	45293872	(37963569)	+	(CA)n	Simple_repeat	1	81	(0)	1621735
2755	25.0	14.0	3.3	chr17	46107255	46108651	(37148790)	+	L2a	LINE/L2	1846	3417	(9)	1623387
188	30.4	10.1	3.9	chr17	46131590	46131719	(37125722)	C	L2a	LINE/L2	(32)	3394	3256	1623427
12	5.5	0.0	0.0	chr17	46131792	46131810	(37125631)	+	(CAC)n	Simple_repeat	1	19	(0)	1623428
22	17.2	1.9	1.8	chr17	46192762	46192817	(37064624)	+	(GAGCAG)n	Simple_repeat	1	56	(0)	1623544
13	20.8	10.6	0.0	chr17	46192891	46192956	(37064485)	+	G-rich	Low_complexity	1	73	(0)	1623545
17	20.2	0.0	4.1	chr17	46193000	46193048	(37064393)	+	(GGCGGA)n	Simple_repeat	1	49	(0)	1623546
116	6.0	2.6	0.0	chr17	49026612	49026767	(34230674)	+	(CCTTCCTG)n	Simple_repeat	1	160	(0)	1629064
2124	10.0	0.4	0.0	chr17	49026772	49027040	(34230401)	C	AluSc5	SINE/Alu	(39)	270	1	1629065
6541	5.0	0.4	2.6	chr17	49150063	49150939	(34106502)	+	SVA_D	Retroposon/SVA	549	1386	(0)	1629316
19	4.0	3.9	0.0	chr17	49515375	49515400	(33742041)	+	(AC)n	Simple_repeat	1	27	(0)	1630080
15	0.0	0.0	0.0	chr17	49515400	49515416	(33742025)	+	(AG)n	Simple_repeat	1	17	(0)	1630081
12	21.5	4.4	2.1	chr17	49515437	49515481	(33741960)	+	(GCAG)n	Simple_repeat	1	47	(0)	1630082
14	27.1	0.0	0.0	chr17	49515586	49515629	(33741812)	+	(CCTGAG)n	Simple_repeat	1	44	(0)	1630083
1986	11.6	0.0	7.1	chr17	49647008	49647343	(33610098)	+	AluSx	SINE/Alu	1	312	(0)	1630309
253	33.2	13.1	4.2	chr17	49659300	49659632	(33597809)	+	L2	LINE/L2	2413	2779	(640)	1630336
241	37.8	9.4	5.1	chr17	50132697	50132930	(33124511)	+	L3	LINE/CR1	3738	3982	(117)	1631218
2337	9.4	0.0	0.7	chr17	50212789	50213087	(33044354)	+	AluSq	SINE/Alu	1	297	(16)	1631322
267	26.6	1.1	10.5	chr17	50213173	50213301	(33044140)	C	MIRb	SINE/MIR	(113)	117	2	1631323
950	19.8	1.1	3.4	chr17	50213419	50213656	(33043785)	C	MIR	SINE/MIR	(15)	247	19	1631324
191	31.6	16.4	1.3	chr17	51287330	51287566	(31969875)	C	L2	LINE/L2	(652)	2767	2488	1633511
536	24.2	4.6	6.8	chr17	57448813	57448989	(25808452)	+	MIRb	SINE/MIR	76	248	(20)	1643290
16	18.8	2.3	2.2	chr17	58531913	58531956	(24725485)	+	(CGCC)n	Simple_repeat	1	45	(0)	1645151
18	19.3	6.4	0.0	chr17	59964739	59964785	(23292656)	+	(GC)n	Simple_repeat	1	50	(0)	1648327
13	23.1	2.1	2.1	chr17	59964783	59964829	(23292612)	+	(CGCCC)n	Simple_repeat	1	48	(0)	1648328
1623	17.0	0.3	3.2	chr17	60505983	60506293	(22751148)	C	AluJo	SINE/Alu	(10)	302	1	1649392
425	35.8	9.9	4.5	chr17	60506294	60506728	(22750713)	+	L2b	LINE/L2	2927	3404	(22)	1649389
1565	19.5	9.6	7.9	chr17	60508888	60509101	(22748340)	+	L1MC5	LINE/L1	8766	8959	(345)	1649398
11	21.5	6.0	1.9	chr17	61412641	61412690	(21844751)	+	(AGGCAC)n	Simple_repeat	1	53	(0)	1651017
14	9.2	0.0	11.4	chr17	63622483	63622535	(19634906)	+	(GGCG)n	Simple_repeat	1	46	(0)	1655052
487	11.8	0.0	0.0	chr17	68019900	68019967	(15237474)	C	tRNA-Arg-AGG	tRNA	(6)	70	3	1663342
443	28.6	5.2	1.2	chr17	68020281	68020446	(15236995)	C	MER5B	DNA/hAT-Charlie	(5)	173	1	1663343
1021	21.2	2.9	0.4	chr17	69848144	69848380	(13409061)	C	L1MB5	LINE/L1	(23)	6151	5909	1666404
26	6.3	0.0	0.0	chr17	71163513	71163545	(12093896)	+	(A)n	Simple_repeat	1	33	(0)	1668367
236	20.8	0.0	1.0	chr17	73147901	73148384	(10109057)	+	(CT)n	Simple_repeat	1	484	(0)	1671742
1755	18.8	0.8	1.0	chr17	73445001	73445388	(9812053)	+	Charlie5	DNA/hAT-Charlie	2235	2621	(3)	1672336
33	0.0	0.0	0.0	chr17	73445699	73445729	(9811712)	+	(GGCA)n	Simple_repeat	1	31	(0)	1672337
472	28.5	7.8	8.3	chr17	74146164	74146381	(9111060)	+	L2a	LINE/L2	3208	3424	(2)	1673567
1866	19.5	3.7	1.2	chr17	74146448	74146891	(9110550)	C	L1MC2	LINE/L1	(0)	6344	5904	1673569
380	24.7	11.2	6.2	chr17	74417305	74417366	(8840075)	+	MIR	SINE/MIR	173	239	(23)	1674127
249	32.5	1.8	5.1	chr17	74417348	74417501	(8839940)	C	MIR3	SINE/MIR	(87)	181	24	1674129
724	6.6	0.0	0.0	chr17	74417614	74417704	(8839737)	C	5S	rRNA	(30)	91	1	1674130
2208	26.9	10.8	1.9	chr17	76168029	76168966	(7088475)	C	HAL1	LINE/L1	(0)	2507	1476	1677489
859	19.5	4.8	11.3	chr17	76617834	76618099	(6639342)	C	LTR65	LTR/ERV1	(256)	413	166	1678392
805	20.8	6.0	0.0	chr17	77061964	77062165	(6195276)	+	MER63D	DNA/hAT-Blackjack	1	215	(846)	1679347
619	14.9	3.9	6.8	chr17	77062189	77062203	(6195238)	C	AluJo	SINE/Alu	(1)	311	299	1679348
2220	9.4	0.7	0.0	chr17	77062204	77062511	(6194930)	C	AluSp	SINE/Alu	(3)	310	1	1679349
280	31.3	5.8	5.3	chr17	78975212	78975400	(4282041)	C	L1ME4c	LINE/L1	(284)	546	357	1682793
2291	9.3	0.0	0.7	chr17	78975532	78975821	(4281620)	+	AluSx1	SINE/Alu	25	312	(0)	1682794
2039	9.4	0.0	0.0	chr17	79745971	79746226	(3511215)	+	AluSq2	SINE/Alu	58	313	(0)	1683863
23	8.0	2.4	0.0	chr17	79746227	79746264	(3511177)	+	(AGAAA)n	Simple_repeat	3	41	(0)	1683864
22	21.5	0.0	0.0	chr17	79746414	79746462	(3510979)	+	(CCT)n	Simple_repeat	1	49	(0)	1683865
34	0.0	0.0	0.0	chr17	81411475	81411514	(1845927)	+	(CCTG)n	Simple_repeat	1	40	(0)	1686237
67	0.0	0.0	0.0	chr17	81411515	81411574	(1845867)	+	(CCTT)n	Simple_repeat	1	60	(0)	1686238
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
1221	27.2	11.8	3.4	chr17	82366895	82367746	(889695)	C	L1MEg	LINE/L1	(4367)	2670	1738	1687532
1685	7.4	2.8	0.0	chr17	82367747	82367988	(889453)	C	LTR71B	LTR/ERV1	(0)	610	362	1687533
2226	10.1	0.6	4.9	chr17	82370034	82370359	(887082)	+	AluSx1	SINE/Alu	1	312	(0)	1687541
780	25.0	10.3	8.1	chr17	82370360	82370542	(886899)	C	MER65C	LTR/ERV1	(245)	216	49	1687540
12	18.6	5.4	0.0	chr17	83050849	83050885	(206556)	+	(GCACGG)n	Simple_repeat	1	39	(0)	1688526
9920	14.7	7.4	5.1	chr17	83168257	83169153	(88288)	C	L1MC1	LINE/L1	(3869)	2452	1546	1688629
58	0.0	0.0	0.0	chr17	83169154	83169205	(88236)	+	(CCTT)n	Simple_repeat	1	52	(0)	1688634
9373	15.2	8.4	6.0	chr17	83169206	83169251	(88190)	C	L1MC1	LINE/L1	(4963)	1545	1545	1688629
1752	20.5	3.2	0.3	chr17	83169252	83169553	(87888)	C	AluJo	SINE/Alu	(0)	312	2	1688635
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
437	19.1	3.8	12.5	chr18	659745	659794	(79713491)	+	L2a	LINE/L2	2770	2811	(608)	1690196
1861	13.3	3.4	0.7	chr18	659795	660080	(79713205)	+	AluSx	SINE/Alu	2	295	(17)	1690197
6310	15.0	6.1	6.6	chr18	6424328	6424908	(73948377)	+	Tigger3b	DNA/TcMar-Tigger	1	579	(652)	1698519
1805	12.6	1.1	8.0	chr18	6424909	6425210	(73948075)	+	AluJr	SINE/Alu	17	297	(15)	1698520
16	11.2	3.2	3.1	chr18	6738754	6738784	(73634501)	+	GA-rich	Low_complexity	1	32	(0)	1698986
464	23.3	20.7	0.6	chr18	6738975	6739155	(73634130)	C	MIRb	SINE/MIR	(16)	252	26	1698987
387	34.9	4.7	4.4	chr18	7163923	7164240	(73209045)	C	L2	LINE/L2	(805)	2614	2296	1699641
2600	15.2	1.7	1.3	chr18	9505918	9506376	(70866909)	C	MER65C	LTR/ERV1	(0)	461	1	1703168
2054	20.8	14.5	4.7	chr18	9506377	9506448	(70866837)	C	L1ME2z	LINE/L1	(1080)	5755	5681	1703167
38	0.0	2.8	0.0	chr18	9506472	9506507	(70866778)	+	(AC)n	Simple_repeat	1	37	(0)	1703169
14	8.5	0.0	3.7	chr18	10922699	10922725	(69450560)	+	(GGCA)n	Simple_repeat	1	27	(0)	1705159
290	25.0	12.5	0.0	chr18	10922784	10922923	(69450362)	C	Tigger14a	DNA/TcMar-Tigger	(74)	250	91	1705160
241	27.3	2.9	0.0	chr18	21593860	21593925	(58779360)	+	MLT1M	LTR/ERVL-MaLR	118	185	(487)	1712871
932	18.7	1.8	8.6	chr18	21593943	21594176	(58779109)	C	MER20	DNA/hAT-Charlie	(0)	219	2	1712872
382	36.9	4.3	0.0	chr18	22901105	22901302	(57471983)	+	MLT1O	LTR/ERVL-MaLR	32	238	(304)	1715177
1943	16.3	1.0	0.0	chr18	25216567	25216855	(55156430)	C	AluJr	SINE/Alu	(20)	292	1	1719059
988	31.8	6.5	4.0	chr18	25216939	25217532	(55155753)	C	L2	LINE/L2	(352)	3067	2458	1719060
898	17.6	1.1	3.1	chr18	25532921	25533113	(54840172)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	1719466
184	37.1	2.3	7.2	chr18	25533188	25533225	(54840060)	C	MIR	SINE/MIR	(90)	172	137	1719467
3735	11.0	3.5	0.0	chr18	25533226	25533770	(54839515)	+	MER61E	LTR/ERV1	1	565	(4)	1719468
420	26.1	5.0	0.7	chr18	25672377	25672511	(54700774)	C	MIR	SINE/MIR	(0)	262	122	1719648
767	27.9	12.2	2.0	chr18	25672565	25672966	(54700319)	+	LTR33A	LTR/ERVL	69	517	(3)	1719649
2180	18.2	3.3	3.5	chr18	26297151	26297581	(54075704)	C	MER65C	LTR/ERV1	(19)	442	1	1720677
2615	22.0	3.6	8.9	chr18	26297582	26298207	(54075078)	C	L1ME1	LINE/L1	(263)	7007	6409	1720676
2436	15.3	1.8	6.8	chr18	28279765	28280233	(52093052)	C	Tigger2	DNA/TcMar-Tigger	(1)	2717	2273	1723545
15261	16.8	2.9	3.5	chr18	29652098	29654224	(50719061)	+	L1MA3	LINE/L1	10	2439	(5126)	1725319
28	0.0	0.0	0.0	chr18	31875412	31875438	(48497847)	+	(GCCT)n	Simple_repeat	1	27	(0)	1728346
843	20.5	2.4	0.6	chr18	32271485	32271646	(48101639)	C	MER5A1	DNA/hAT-Charlie	(1)	165	1	1729137
1894	16.4	1.7	0.0	chr18	32560675	32560960	(47812325)	C	AluJr	SINE/Alu	(21)	291	1	1729546
26	18.3	0.0	4.5	chr18	32561106	32561143	(47812142)	+	(GCCT)n	Simple_repeat	1	37	(0)	1729547
49	7.9	0.0	0.0	chr18	32561144	32561210	(47812075)	+	(CCTC)n	Simple_repeat	1	67	(0)	1729548
26	18.3	0.0	4.5	chr18	32561211	32561238	(47812047)	+	(GCCT)n	Simple_repeat	2	28	(0)	1729549
1507	18.6	5.8	0.0	chr18	32561242	32561499	(47811786)	C	AluJr	SINE/Alu	(37)	275	2	1729550
14381	20.4	3.5	3.0	chr18	33236612	33241429	(47131856)	+	L1MA5A	LINE/L1	729	5640	(1922)	1730471
5201	15.4	5.3	0.7	chr18	34193089	34194348	(46178937)	+	L1MA8	LINE/L1	4970	6281	(10)	1731621
54	23.1	0.7	2.7	chr18	34194367	34194515	(46178770)	+	GA-rich	Low_complexity	1	150	(0)	1731623
2367	10.1	0.3	1.3	chr18	34194743	34195058	(46178227)	+	AluSp	SINE/Alu	1	313	(0)	1731624
3767	11.3	4.6	2.4	chr18	35862125	35862676	(44510609)	+	MER61E	LTR/ERV1	1	565	(4)	1733901
1927	17.9	2.4	0.3	chr18	40857638	40857962	(39515323)	+	MER1B	DNA/hAT-Charlie	3	334	(5)	1740579
189	27.2	8.8	5.5	chr18	47923267	47923375	(32449910)	+	AmnSINE2	SINE/tRNA-Deu	68	180	(178)	1751003
416	22.7	0.0	3.3	chr18	47923382	47923430	(32449855)	+	MER3	DNA/hAT-Charlie	2	47	(162)	1751004
799	18.0	6.4	0.6	chr18	47923431	47923592	(32449693)	C	MER3	DNA/hAT-Charlie	(0)	209	38	1751005
14	6.8	9.7	0.0	chr18	48902043	48902073	(31471212)	+	(GCAG)n	Simple_repeat	1	34	(0)	1752634
390	33.5	10.6	3.0	chr18	49291854	49292087	(31081198)	+	Tigger19a	DNA/TcMar-Tigger	2	255	(68)	1753255
38	11.2	0.0	0.0	chr18	49292296	49292355	(31080930)	+	(ACAG)n	Simple_repeat	1	60	(0)	1753256
55	0.0	0.0	0.0	chr18	49292356	49292402	(31080883)	+	(AC)n	Simple_repeat	1	47	(0)	1753257
28122	17.0	7.8	7.8	chr18	52790112	52792754	(27580531)	C	HUERS-P3b-int	LTR/ERV1	(7)	2901	90	1758952
78	6.2	1.0	0.9	chr18	52792755	52792858	(27580427)	+	(ATTCC)n	Simple_repeat	1	105	(0)	1758954
28122	17.0	7.8	7.8	chr18	52792859	52792933	(27580352)	C	HUERS-P3b-int	LTR/ERV1	(7329)	89	25	1758952
23	0.0	0.0	0.0	chr18	57857282	57857309	(22515976)	+	(CCTG)n	Simple_repeat	1	28	(0)	1766324
71	0.0	0.0	0.0	chr18	57857310	57857372	(22515913)	+	(CCTT)n	Simple_repeat	1	63	(0)	1766325
2719	6.8	11.6	0.5	chr18	57857373	57857769	(22515516)	+	LTR7	LTR/ERV1	2	448	(2)	1766326
27	0.0	0.0	0.0	chr18	57912020	57912045	(22461240)	+	(TTTGTT)n	Simple_repeat	1	26	(0)	1766445
1592	13.0	0.0	10.9	chr18	57912054	57912338	(22460947)	C	AluJr	SINE/Alu	(37)	275	22	1766446
1704	14.8	5.2	1.3	chr18	62713927	62714254	(17659031)	+	AluSx3	SINE/Alu	1	311	(0)	1773931
74	20.9	0.0	0.6	chr18	63682823	63682979	(16690306)	+	(CCTC)n	Simple_repeat	1	157	(0)	1775466
80	13.5	2.9	3.4	chr18	63682964	63683134	(16690151)	+	(CTTT)n	Simple_repeat	1	176	(0)	1775467
12	19.9	9.6	0.0	chr18	69400657	69400708	(10972577)	+	G-rich	Low_complexity	1	57	(0)	1783142
188	33.0	2.0	6.5	chr18	69846202	69846308	(10526977)	C	MIR3	SINE/MIR	(20)	188	87	1783749
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
801	17.9	1.8	1.8	chr18	80193507	80193671	(179614)	+	L1MB3	LINE/L1	6016	6180	(3)	1796248
571	27.6	6.4	5.5	chr19	711473	711783	(57905833)	+	MER113	DNA/hAT-Charlie	147	460	(61)	1797432
598	12.5	0.0	0.0	chr19	711818	711897	(57905719)	C	FLAM_A	SINE/Alu	(41)	101	22	1797433
210	31.8	0.0	0.0	chr19	711935	711997	(57905619)	C	L2b	LINE/L2	(0)	3375	3313	1797434
2187	10.4	0.3	0.3	chr19	712025	712321	(57905295)	C	AluSx1	SINE/Alu	(14)	298	2	1797435
2454	5.3	0.7	1.7	chr19	4324854	4325152	(54292464)	+	AluY	SINE/Alu	2	297	(14)	1805362
271	35.0	9.0	3.4	chr19	4455818	4456040	(54161576)	+	L2a	LINE/L2	3122	3387	(39)	1805614
205	28.3	4.0	1.2	chr19	5367334	5368106	(53249510)	+	(GGAT)n	Simple_repeat	1	804	(0)	1807782
7198	19.4	6.7	1.3	chr19	6297320	6298831	(52318785)	+	MER52A	LTR/ERV1	79	1750	(5)	1809834
2239	12.9	0.0	0.3	chr19	6510333	6510643	(52106973)	+	AluSx1	SINE/Alu	1	310	(2)	1810436
881	6.1	0.0	0.0	chr19	6511014	6511127	(52106489)	+	MER4A1	LTR/ERV1	1	114	(358)	1810437
237	26.3	8.4	1.3	chr19	6511112	6511135	(52106481)	C	SVA_F	Retroposon/SVA	(908)	467	385	1810438
82	30.6	1.8	0.3	chr19	7197505	7197782	(51419834)	+	(GT)n	Simple_repeat	1	283	(0)	1812250
41	12.2	0.0	0.0	chr19	7197803	7197864	(51419752)	+	(AG)n	Simple_repeat	1	62	(0)	1812251
40	22.6	1.3	0.7	chr19	7197919	7198077	(51419539)	+	(GT)n	Simple_repeat	1	160	(0)	1812252
237	25.0	0.0	0.0	chr19	8101290	8101345	(50516271)	+	MLT1D	LTR/ERVL-MaLR	450	505	(0)	1814396
256	25.4	9.2	0.7	chr19	8101429	8101599	(50516017)	+	L2c	LINE/L2	2976	3170	(205)	1814397
2236	8.8	1.0	1.7	chr19	9598130	9598425	(49019191)	+	AluY	SINE/Alu	1	294	(17)	1817717
2583	18.1	1.9	7.9	chr19	9598426	9598858	(49018758)	+	MER54B	LTR/ERVL	155	576	(217)	1817716
2333	9.7	0.0	1.3	chr19	9598859	9599169	(49018447)	+	AluSx	SINE/Alu	2	308	(4)	1817718
189	30.8	20.4	0.6	chr19	12796429	12796585	(45821031)	C	MIRb	SINE/MIR	(56)	212	17	1825226
1455	15.4	11.6	1.8	chr19	13195545	13195816	(45421800)	C	AluSx1	SINE/Alu	(10)	302	1	1826106
422	24.9	1.5	4.2	chr19	15145060	15145214	(43472402)	+	L1M3b	LINE/L1	3275	3428	(4137)	1831214
574	16.5	3.0	0.0	chr19	15145215	15145311	(43472305)	+	U6	snRNA	1	100	(7)	1831216
1491	22.4	2.0	4.1	chr19	15145312	15145629	(43471987)	+	L1M3b	LINE/L1	3402	3717	(3929)	1831214
1212	12.3	0.0	0.0	chr19	15177103	15177265	(43440351)	+	AluSx	SINE/Alu	137	299	(13)	1831304
18	32.9	0.9	4.6	chr19	15177316	15177423	(43440193)	+	(AGAC)n	Simple_repeat	1	109	(0)	1831305
13	22.3	0.0	2.6	chr19	15177480	15177518	(43440098)	+	(GGAT)n	Simple_repeat	1	39	(0)	1831306
358	28.8	2.6	0.7	chr19	15460859	15460989	(43156627)	C	MIR	SINE/MIR	(62)	206	71	1831833
27	0.0	0.0	0.0	chr19	15461332	15461357	(43156259)	+	(AGGC)n	Simple_repeat	1	26	(0)	1831835
15	26.0	4.1	5.9	chr19	15461388	15461485	(43156131)	+	(TCC)n	Simple_repeat	1	102	(0)	1831836
496	32.0	8.3	3.5	chr19	17829795	17830024	(40787592)	C	MIRb	SINE/MIR	(10)	258	17	1837388
2240	11.4	0.0	0.0	chr19	18235174	18235470	(40382146)	C	AluSx1	SINE/Alu	(15)	297	1	1838427
804	26.9	11.4	7.8	chr19	18235475	18235940	(40381676)	+	L2b	LINE/L2	2619	3116	(259)	1838428
181	33.9	6.7	3.5	chr19	18698949	18699064	(39918552)	C	OldhAT1	DNA/hAT-Ac	(159)	2689	2570	1839404
311	31.2	13.8	4.3	chr19	18877779	18877986	(39739630)	+	L2	LINE/L2	2410	2640	(779)	1839747
612	19.6	3.9	0.0	chr19	21505119	21505259	(37112357)	+	MER33	DNA/hAT-Charlie	163	309	(15)	1844139
1794	20.3	9.6	4.4	chr19	33902655	33903008	(24714608)	C	MER44B	DNA/TcMar-Tigger	(0)	550	173	1857517
3260	18.6	0.6	7.2	chr19	33903009	33903357	(24714259)	C	LTR9D	LTR/ERV1	(0)	645	329	1857518
5964	5.7	1.9	0.9	chr19	35389775	35390452	(23227164)	C	MER4E1	LTR/ERV1	(0)	781	95	1860302
2213	11.4	0.7	0.0	chr19	35390453	35390749	(23226867)	+	AluSx1	SINE/Alu	1	299	(13)	1860303
14	16.9	0.0	2.9	chr19	35702827	35702861	(22914755)	+	(AGTGGA)n	Simple_repeat	1	35	(0)	1861017
2317	7.4	0.0	0.3	chr19	35703028	35703323	(22914293)	C	AluSx1	SINE/Alu	(17)	295	1	1861018
6106	13.8	2.6	2.6	chr19	36332169	36333136	(22284480)	C	LTR5_Hs	LTR/ERVK	(0)	968	1	1862326
862	10.7	0.8	0.8	chr19	38898794	38898914	(19718702)	C	AluJo	SINE/Alu	(8)	304	184	1867705
336	29.3	15.1	0.5	chr19	40369379	40369511	(18248105)	+	MIR	SINE/MIR	77	236	(26)	1870894
2439	10.9	0.3	2.6	chr19	41441267	41441613	(17176003)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	1873441
634	24.8	7.5	4.1	chr19	41441614	41441757	(17175859)	C	L2a	LINE/L2	(654)	2765	2614	1873440
276	20.5	8.8	4.6	chr19	41441831	41441917	(17175699)	+	MLT1D	LTR/ERVL-MaLR	1	91	(414)	1873442
2334	9.2	0.0	0.0	chr19	41441920	41442212	(17175404)	+	AluSx	SINE/Alu	1	293	(19)	1873443
3188	15.2	0.2	0.2	chr19	42495401	42495868	(16121748)	C	MER41-int	LTR/ERV1	(5304)	642	175	1875397
44	2.3	0.0	0.0	chr19	42495870	42495914	(16121702)	+	(TGCC)n	Simple_repeat	1	45	(0)	1875403
67	19.8	2.0	0.7	chr19	42495915	42496061	(16121555)	+	(TCCT)n	Simple_repeat	1	150	(0)	1875404
2286	16.1	4.2	7.2	chr19	42680665	42681033	(15936583)	+	MSTA	LTR/ERVL-MaLR	1	372	(56)	1875677
2675	8.4	0.0	0.0	chr19	42681034	42681342	(15936274)	C	AluY	SINE/Alu	(2)	309	1	1875678
18	10.1	2.0	7.8	chr19	43145388	43145437	(15472179)	+	(CTTCCCT)n	Simple_repeat	1	51	(0)	1876290
616	28.4	9.3	0.0	chr19	45016891	45017133	(13600483)	C	MER20B	DNA/hAT-Charlie	(515)	268	1	1880236
680	15.4	4.0	1.6	chr19	45017344	45017466	(13600150)	+	AluJr	SINE/Alu	173	298	(14)	1880241
345	33.0	10.4	0.0	chr19	45349849	45350021	(13267595)	C	MIR	SINE/MIR	(11)	251	59	1881076
47	0.0	0.0	0.0	chr19	45455578	45455617	(13161999)	+	(GT)n	Simple_repeat	1	40	(0)	1881362
305	19.6	4.2	9.8	chr19	45455618	45455662	(13161954)	+	L2a	LINE/L2	3389	3425	(1)	1881361
16	16.7	2.4	2.3	chr19	46777491	46777532	(11840084)	+	(CCCAC)n	Simple_repeat	1	43	(0)	1884516
1949	10.3	8.7	0.0	chr19	46785798	46786070	(11831546)	+	AluSz6	SINE/Alu	1	299	(13)	1884538
2110	9.5	0.3	1.1	chr19	46820372	46820655	(11796961)	C	AluSx	SINE/Alu	(30)	282	1	1884651
821	26.0	13.0	2.2	chr19	46820656	46820760	(11796856)	C	L2	LINE/L2	(760)	2659	2553	1884649
425	31.7	5.7	0.0	chr19	47012785	47012967	(11604649)	C	L2	LINE/L2	(673)	2746	2553	1885061
224	33.0	9.6	0.0	chr19	47012982	47013075	(11604541)	+	L2b	LINE/L2	3220	3323	(52)	1885048
2081	9.8	0.3	1.4	chr19	47312979	47313274	(11304342)	C	AluSg	SINE/Alu	(16)	294	2	1885838
2228	7.2	1.7	0.0	chr19	47313467	47313756	(11303860)	+	AluY	SINE/Alu	1	295	(16)	1885839
2356	9.7	0.0	0.0	chr19	47706411	47706708	(10910908)	C	AluSx1	SINE/Alu	(13)	299	2	1886828
2280	14.9	5.8	8.7	chr19	47706709	47706946	(10910670)	C	MER83	LTR/ERV1	(201)	247	1	1886825
594	27.9	11.8	0.0	chr19	47706953	47707124	(10910492)	C	MER91A	DNA/hAT-Tip100	(0)	196	2	1886829
1365	24.2	8.4	1.8	chr19	47707125	47707590	(10910026)	C	L2a	LINE/L2	(241)	3185	2678	1886819
1756	13.8	9.8	0.0	chr19	47955897	47956171	(10661445)	C	AluSx1	SINE/Alu	(7)	305	1	1887543
1062	18.2	0.0	4.2	chr19	47956179	47956370	(10661246)	C	AluJb	SINE/Alu	(22)	290	107	1887544
1415	26.7	11.0	2.6	chr19	48588604	48589545	(10028071)	C	L2a	LINE/L2	(133)	3293	2253	1889155
1809	12.6	0.0	10.1	chr19	49671467	49671648	(8945968)	+	AluJr	SINE/Alu	128	293	(19)	1891656
276	28.1	3.3	2.2	chr19	49671649	49671740	(8945876)	+	MIRb	SINE/MIR	141	237	(31)	1891655
410	31.6	4.9	8.1	chr19	49671791	49672110	(8945506)	+	L2a	LINE/L2	3061	3369	(57)	1891659
315	38.4	0.6	3.4	chr19	55079870	55080047	(3537569)	+	MIRc	SINE/MIR	18	190	(78)	1902966
21	24.1	6.2	2.0	chr19	55080285	55080380	(3537236)	+	(AGCTGG)n	Simple_repeat	1	102	(0)	1902967
290	19.5	0.0	4.5	chr19	55333287	55333364	(3284252)	+	FRAM	SINE/Alu	80	138	(28)	1903515
2238	12.1	0.0	1.6	chr19	55333387	55333700	(3283916)	C	AluSx1	SINE/Alu	(3)	309	1	1903516
1220	20.3	9.8	0.0	chr19	55333706	55334001	(3283615)	C	L1MB5	LINE/L1	(36)	6138	5811	1903517
381	27.1	8.5	0.0	chr19	55334107	55334247	(3283369)	+	MIR	SINE/MIR	71	228	(40)	1903518
232	30.1	5.2	0.4	chr19	55670357	55670454	(2947162)	C	L2a	LINE/L2	(18)	3408	3251	1904263
555	29.3	10.1	0.8	chr2	9106717	9106950	(233086579)	+	MIRb	SINE/MIR	5	262	(6)	1922336
217	21.2	16.3	10.6	chr2	9106919	9107050	(233086479)	C	MIRb	SINE/MIR	(91)	177	37	1922335
28	4.7	0.0	6.0	chr2	9107174	9107223	(233086306)	+	(CTTGGCATC)n	Simple_repeat	1	50	(0)	1922337
30	0.0	0.0	0.0	chr2	9521841	9521868	(232671661)	+	(CTGC)n	Simple_repeat	1	28	(0)	1923097
397	29.2	15.9	2.6	chr2	9521869	9522139	(232671390)	+	LTR79	LTR/ERVL	214	527	(0)	1923098
1825	12.7	6.2	2.0	chr2	11466438	11466729	(230726800)	C	AluJo	SINE/Alu	(7)	305	1	1926688
19	3.9	0.0	0.0	chr2	11466829	11466855	(230726674)	+	(CTGC)n	Simple_repeat	1	27	(0)	1926689
42	0.0	2.4	0.0	chr2	11466856	11466897	(230726632)	+	(CCTT)n	Simple_repeat	1	43	(0)	1926690
764	26.2	0.2	4.6	chr2	11467014	11467245	(230726284)	+	MIR	SINE/MIR	20	231	(31)	1926691
2212	5.8	1.5	0.0	chr2	12081029	12081286	(230112243)	+	AluY	SINE/Alu	50	311	(0)	1927737
200	26.9	6.9	1.5	chr2	12081293	12081360	(230112169)	+	L2a	LINE/L2	3350	3421	(5)	1927738
295	32.4	9.2	3.4	chr2	12081458	12081772	(230111757)	C	Tigger12c	DNA/TcMar-Tigger	(0)	734	153	1927739
922	25.7	9.4	2.9	chr2	18252047	18252482	(223941047)	C	LTR27D	LTR/ERV1	(63)	781	207	1937186
334	17.3	4.7	0.0	chr2	18252694	18252774	(223940755)	C	MER61E	LTR/ERV1	(484)	85	1	1937187
1946	10.0	7.2	1.7	chr2	19737159	19737447	(222456082)	C	AluSx	SINE/Alu	(6)	306	1	1939227
328	31.1	3.7	3.7	chr2	20143646	20143832	(222049697)	C	Tigger15a	DNA/TcMar-Tigger	(22)	693	507	1939833
14	4.9	0.0	0.0	chr2	20291075	20291095	(221902434)	+	(AAT)n	Simple_repeat	1	21	(0)	1940073
14	4.5	0.0	4.0	chr2	20667205	20667229	(221526300)	+	(GCCC)n	Simple_repeat	1	25	(0)	1940719
28	0.0	0.0	0.0	chr2	20667363	20667388	(221526141)	+	(GGC)n	Simple_repeat	1	26	(0)	1940720
12	20.6	3.8	8.5	chr2	20667400	20667411	(221526118)	+	G-rich	Low_complexity	1	43	(39)	1940721
14	23.8	6.8	0.0	chr2	20667412	20667470	(221526059)	+	(GCGCC)n	Simple_repeat	1	63	(0)	1940722
2011	22.8	2.6	6.4	chr2	20706916	20707478	(221486051)	+	MER74B	LTR/ERVL	59	599	(23)	1940756
3507	11.9	3.0	1.3	chr2	21746198	21746752	(220446777)	C	MER61E	LTR/ERV1	(4)	565	1	1942152
1447	17.7	2.5	4.3	chr2	21746753	21746798	(220446731)	+	AluJr	SINE/Alu	262	305	(7)	1942151
1111	30.7	2.5	2.5	chr2	21746830	21747428	(220446101)	C	MLT1H2-int	LTR/ERVL-MaLR	(886)	523	2	1942148
6463	7.5	1.1	1.7	chr2	24356375	24356631	(217836898)	+	L1PA8A	LINE/L1	5192	5440	(691)	1945928
2194	9.1	3.7	0.0	chr2	24356632	24356916	(217836613)	+	AluSq2	SINE/Alu	1	296	(17)	1945931
6463	7.4	1.1	1.5	chr2	24356917	24357611	(217835918)	+	L1PA8A	LINE/L1	5441	6128	(3)	1945928
203	29.7	11.3	2.3	chr2	24878794	24879015	(217314514)	+	L2a	LINE/L2	3107	3396	(30)	1946859
238	29.9	16.7	5.4	chr2	24879030	24879190	(217314339)	+	MIRb	SINE/MIR	7	192	(76)	1946860
2195	6.6	7.5	1.4	chr2	24879191	24879478	(217314051)	+	AluY	SINE/Alu	1	307	(4)	1946861
238	29.9	16.7	5.4	chr2	24879479	24879521	(217314008)	+	MIRb	SINE/MIR	193	239	(29)	1946860
456	28.9	11.4	2.5	chr2	24879575	24879773	(217313756)	C	MIRc	SINE/MIR	(25)	243	25	1946862
27	0.0	0.0	0.0	chr2	25674586	25674611	(216518918)	+	(CTGC)n	Simple_repeat	1	26	(0)	1948352
2283	9.4	0.3	0.3	chr2	25674735	25675032	(216518497)	+	AluSz	SINE/Alu	1	298	(14)	1948353
19	10.4	0.0	0.0	chr2	25768831	25768861	(216424668)	+	(TGC)n	Simple_repeat	1	31	(0)	1948520
13	14.7	3.3	0.0	chr2	26724038	26724067	(215469462)	+	(CAGG)n	Simple_repeat	1	31	(0)	1950474
1606	27.5	5.8	3.7	chr2	28513099	28513642	(213679887)	C	L1MEg	LINE/L1	(5422)	662	107	1953691
199	28.8	1.5	4.3	chr2	28643502	28643570	(213549959)	C	L2a	LINE/L2	(0)	3426	3360	1953907
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
2167	12.0	0.3	0.7	chr2	37850792	37851099	(204342430)	C	AluSx1	SINE/Alu	(2)	310	4	1968338
27	19.5	3.1	5.9	chr2	39437114	39437211	(202756318)	+	(CGC)n	Simple_repeat	1	101	(0)	1971190
16	18.8	2.3	2.2	chr2	39437296	39437339	(202756190)	+	(CTC)n	Simple_repeat	1	45	(0)	1971191
61	0.0	1.7	1.6	chr2	40451726	40451785	(201741744)	+	(CA)n	Simple_repeat	1	61	(0)	1972602
1681	14.6	0.0	8.2	chr2	42601690	42601860	(199591669)	C	AluSz	SINE/Alu	(22)	290	142	1975977
1995	12.9	0.0	0.4	chr2	42601861	42602132	(199591397)	C	AluSx1	SINE/Alu	(33)	279	9	1975978
1681	14.6	0.0	8.2	chr2	42602133	42602276	(199591253)	C	AluSz	SINE/Alu	(171)	141	1	1975977
1200	20.1	5.5	4.6	chr2	42602287	42602589	(199590940)	C	L1M5	LINE/L1	(399)	5763	5458	1975979
1861	12.1	0.7	5.9	chr2	46540160	46540466	(195653063)	+	AluSz	SINE/Alu	22	312	(0)	1982421
28	0.0	0.0	0.0	chr2	46540614	46540640	(195652889)	+	(T)n	Simple_repeat	1	27	(0)	1982422
546	19.8	1.9	0.9	chr2	46540941	46541066	(195652463)	C	MIR3	SINE/MIR	(110)	158	24	1982423
39	0.0	0.0	0.0	chr2	47260363	47260398	(194933131)	+	(CAGG)n	Simple_repeat	1	36	(0)	1983655
2190	10.8	1.0	0.7	chr2	47260472	47260767	(194932762)	+	AluSz	SINE/Alu	1	297	(15)	1983656
206	33.0	13.3	2.8	chr2	47756051	47756231	(194437298)	C	MamTip2	DNA/hAT-Tip100	(29)	276	74	1984720
1472	14.9	0.3	15.9	chr2	47756321	47756511	(194437018)	C	AluJb	SINE/Alu	(0)	312	133	1984721
294	28.4	9.9	2.5	chr2	54603993	54604151	(187589378)	C	MIR3	SINE/MIR	(25)	183	12	1994619
16	0.0	7.7	0.0	chr2	54604348	54604373	(187589156)	+	(CTTT)n	Simple_repeat	1	28	(0)	1994620
180	17.6	0.0	2.9	chr2	55843154	55843188	(186350341)	C	OldhAT1	DNA/hAT-Ac	(2217)	631	598	1996653
413	36.3	4.3	4.9	chr2	56444627	56444910	(185748619)	+	LTR88a	LTR/Gypsy?	375	656	(160)	1997418
660	30.8	7.4	7.7	chr2	59528429	59528766	(182664763)	+	MLT1O	LTR/ERVL-MaLR	14	350	(192)	2001231
21	26.6	1.7	0.0	chr2	59528924	59528981	(182664548)	+	(AT)n	Simple_repeat	1	59	(0)	2001232
420	29.8	4.5	6.6	chr2	60257015	60257197	(181936332)	C	MIR1_Amn	SINE/MIR	(88)	180	2	2002174
50	0.0	0.0	0.0	chr2	60519540	60519584	(181673945)	+	(TGCC)n	Simple_repeat	1	45	(0)	2002545
12	26.8	0.0	8.9	chr2	61065894	61065972	(181127557)	+	G-rich	Low_complexity	1	79	(0)	2003591
3800	16.7	3.2	3.2	chr2	64936167	64936713	(177256816)	+	L1MB7	LINE/L1	5619	6165	(19)	2010228
51	0.0	2.0	0.0	chr2	65608296	65608345	(176585184)	+	(AAAAC)n	Simple_repeat	1	51	(0)	2011637
3351	18.7	9.0	9.2	chr2	69776864	69777599	(172415930)	C	MER21C	LTR/ERVL	(169)	769	1	2017734
525	30.6	8.8	0.0	chr2	69777614	69777819	(172415710)	+	L2a	LINE/L2	2942	3167	(259)	2017741
1423	21.6	8.8	1.0	chr2	69777868	69778181	(172415348)	C	MER58B	DNA/hAT-Charlie	(0)	341	1	2017742
378	27.4	3.1	1.6	chr2	70647615	70647740	(171545789)	C	MIR	SINE/MIR	(127)	135	8	2019410
231	20.4	0.0	3.9	chr2	70648160	70648210	(171545319)	C	L1MD	LINE/L1	(3425)	2721	2673	2019411
399	18.1	7.2	1.1	chr2	72126026	72126153	(170067376)	+	L1MD3	LINE/L1	7907	7984	(11)	2021614
44	2.2	2.2	0.0	chr2	72126154	72126199	(170067330)	+	(AC)n	Simple_repeat	1	47	(0)	2021615
409	15.6	18.2	0.0	chr2	72126543	72126632	(170066897)	+	MLT1K	LTR/ERVL-MaLR	145	254	(341)	2021616
1488	14.1	2.2	0.0	chr2	73229114	73229333	(168964196)	C	AluJb	SINE/Alu	(3)	309	85	2023368
270	31.6	10.6	6.2	chr2	73229680	73229896	(168963633)	C	MIR3	SINE/MIR	(17)	245	21	2023369
232	31.8	12.0	4.9	chr2	73290482	73290666	(168902863)	+	MIRb	SINE/MIR	22	221	(47)	2023455
17	18.7	1.9	3.8	chr2	84654983	84655034	(157538495)	+	(CCTG)n	Simple_repeat	1	53	(0)	2039277
23	19.6	4.7	0.0	chr2	87221690	87221753	(154971776)	+	GA-rich	Low_complexity	1	67	(0)	2043935
35	5.0	0.0	0.0	chr2	87221874	87221915	(154971614)	+	(TTTTCTTTT)n	Simple_repeat	1	42	(0)	2043936
51	3.9	0.0	0.0	chr2	88625285	88625337	(153568192)	+	(AC)n	Simple_repeat	1	53	(0)	2046395
17	18.2	0.0	0.0	chr2	88625838	88625868	(153567661)	+	(TA)n	Simple_repeat	1	31	(0)	2046396
385	30.7	4.1	0.7	chr2	88986953	88987093	(153206436)	C	LTR67B	LTR/ERVL	(51)	569	424	2046879
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
2423	7.7	0.7	0.0	chr2	96182556	96182854	(146010675)	+	AluSp	SINE/Alu	2	302	(11)	2051705
2046	12.3	2.7	0.0	chr2	96182869	96183160	(146010369)	+	AluSx3	SINE/Alu	2	301	(10)	2051706
2054	12.3	0.6	5.8	chr2	96523236	96523561	(145669968)	+	AluSz	SINE/Alu	1	309	(3)	2052285
60	14.9	0.0	2.6	chr2	96523568	96523684	(145669845)	+	GA-rich	Low_complexity	1	117	(0)	2052286
11	24.1	0.0	0.0	chr2	96523700	96523733	(145669796)	+	(CCAGAC)n	Simple_repeat	1	34	(0)	2052287
631	26.2	3.0	0.0	chr2	97972182	97972345	(144221184)	+	L1MEc	LINE/L1	528	696	(5704)	2054343
309	20.0	0.0	0.0	chr2	97972362	97972416	(144221113)	+	AluYd8	SINE/Alu	235	289	(10)	2054344
32	6.7	0.0	2.0	chr2	97972437	97972485	(144221044)	+	(GGGA)n	Simple_repeat	1	49	(0)	2054345
35	5.0	0.0	0.0	chr2	97972486	97972527	(144221002)	+	(AGGC)n	Simple_repeat	1	42	(0)	2054346
1703	19.6	4.0	15.5	chr2	97972562	97973135	(144220394)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	2054347
1948	16.2	0.0	4.1	chr2	99485835	99486148	(142707381)	+	AluJb	SINE/Alu	2	302	(10)	2056536
2260	16.8	1.6	4.7	chr2	101540323	101540730	(140652799)	C	MER65C	LTR/ERV1	(32)	429	31	2059770
4570	22.2	2.2	4.2	chr2	101540738	101542477	(140651052)	C	L1ME1	LINE/L1	(378)	5979	4271	2059769
249	36.2	0.9	5.4	chr2	108227901	108228011	(133965518)	C	MIRb	SINE/MIR	(151)	117	12	2068952
56	8.0	0.0	1.2	chr2	108228012	108228094	(133965435)	+	(AGGA)n	Simple_repeat	1	83	(0)	2068953
28	0.0	0.0	0.0	chr2	108228097	108228123	(133965406)	+	(GGCA)n	Simple_repeat	1	27	(0)	2068954
666	22.1	12.8	2.5	chr2	108228270	108228506	(133965023)	C	LTR50	LTR/ERVL	(0)	795	531	2068955
479	31.4	11.2	4.6	chr2	109446292	109446748	(132746781)	C	L2a	LINE/L2	(0)	3426	2936	2070703
684	24.6	11.0	3.9	chr2	112606649	112606934	(129586595)	C	LTR75	LTR/ERVL	(15)	593	279	2075410
457	16.7	2.3	0.0	chr2	112606956	112607039	(129586490)	+	MLT1E1	LTR/ERVL-MaLR	4	89	(565)	2075411
18	27.9	1.4	2.7	chr2	112607094	112607166	(129586363)	+	(GCCT)n	Simple_repeat	1	74	(0)	2075412
119	20.8	1.1	1.1	chr2	112607148	112607413	(129586116)	+	(CCTCC)n	Simple_repeat	1	269	(0)	2075413
14	10.1	6.2	0.0	chr2	113889918	113889949	(128303580)	+	G-rich	Low_complexity	1	34	(0)	2077575
17	11.7	0.0	8.9	chr2	113890006	113890050	(128303479)	+	GA-rich	Low_complexity	1	45	(0)	2077576
12	11.9	0.0	6.5	chr2	113890041	113890071	(128303458)	+	G-rich	Low_complexity	1	31	(0)	2077577
18	9.7	0.0	5.4	chr2	113890231	113890267	(128303262)	+	(AGC)n	Simple_repeat	1	37	(0)	2077578
219	29.4	12.1	2.5	chr2	118085424	118085580	(124107949)	+	L2a	LINE/L2	3228	3401	(25)	2083163
2053	12.7	1.7	3.1	chr2	122519799	122519866	(119673663)	+	L1MA6	LINE/L1	5947	6013	(287)	2090528
3721	12.7	1.2	1.4	chr2	122519867	122520432	(119673097)	+	MER61E	LTR/ERV1	1	565	(4)	2090529
2268	7.1	1.0	1.3	chr2	130179111	130179420	(112014109)	C	AluY	SINE/Alu	(2)	309	1	2101453
1271	11.3	1.0	0.5	chr2	130179458	130179652	(112013877)	C	AluSz6	SINE/Alu	(83)	229	34	2101454
2118	11.5	0.0	0.0	chr2	130179657	130179952	(112013577)	C	AluSc5	SINE/Alu	(13)	296	1	2101455
4191	8.5	0.5	2.1	chr2	134590494	134590787	(107602742)	C	MER41A	LTR/ERV1	(0)	554	261	2107610
4048	9.1	4.6	0.6	chr2	134590788	134591329	(107602200)	+	MER61E	LTR/ERV1	1	565	(4)	2107611
3731	16.5	6.9	0.3	chr2	135143970	135144685	(107048844)	C	LTR27C	LTR/ERV1	(0)	767	1	2108531
241	34.7	8.7	1.3	chr2	137165281	137165429	(105028100)	C	AmnSINE2	SINE/tRNA-Deu	(156)	202	42	2111711
3785	9.2	5.3	0.4	chr2	139864873	139865409	(102328120)	+	MER61E	LTR/ERV1	1	565	(4)	2115385
2602	6.6	1.4	0.3	chr2	140518603	140518952	(101674577)	C	L1PA6	LINE/L1	(1663)	4483	4130	2116211
279	18.9	3.9	2.6	chr2	141814104	141814179	(100379350)	C	MER61E	LTR/ERV1	(544)	223	147	2117987
491	15.7	4.9	0.7	chr2	141814264	141814390	(100379139)	C	MER61E	LTR/ERV1	(462)	132	1	2117987
633	26.8	0.0	2.5	chr2	141814392	141814552	(100378977)	C	L2a	LINE/L2	(593)	2826	2670	2117984
379	41.6	4.5	2.9	chr2	143852314	143852551	(98340978)	C	MamSINE1	SINE/tRNA-RTE	(14)	276	35	2120578
3869	10.7	2.1	2.5	chr2	146696994	146697560	(95495969)	C	MER61E	LTR/ERV1	(4)	565	1	2124227
16	17.8	2.1	4.1	chr2	146697585	146697632	(95495897)	+	(CAGAT)n	Simple_repeat	1	49	(0)	2124228
606	20.8	6.5	0.6	chr2	146697656	146697815	(95495714)	+	MER96B	DNA/hAT-Tip100	248	417	(0)	2124229
51	0.0	0.0	0.0	chr2	147523954	147523999	(94669530)	+	(AGGC)n	Simple_repeat	1	46	(0)	2125338
22	9.2	0.0	0.0	chr2	147524001	147524035	(94669494)	+	(AAGG)n	Simple_repeat	1	35	(0)	2125339
1926	18.7	0.0	2.9	chr2	147524076	147524390	(94669139)	C	AluJb	SINE/Alu	(6)	306	1	2125340
13	18.9	0.0	0.0	chr2	149132876	149132905	(93060624)	+	(TTAT)n	Simple_repeat	1	30	(0)	2127649
2133	15.9	3.3	1.4	chr2	150536735	150537154	(91656375)	C	L1MA4	LINE/L1	(9)	6291	5864	2129499
328	17.3	0.0	0.0	chr2	150537155	150537206	(91656323)	+	L1MA4	LINE/L1	5826	5877	(420)	2129499
2201	15.1	5.4	1.5	chr2	150537298	150537708	(91655821)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2129500
4991	20.8	6.5	6.7	chr2	155099497	155101370	(87092159)	+	L1M1	LINE/L1	23	2231	(5334)	2135790
246	33.0	9.9	3.9	chr2	158984768	158985127	(83208402)	C	L2	LINE/L2	(337)	3082	2699	2140935
288	24.7	2.3	3.4	chr2	158985203	158985290	(83208239)	C	MIRb	SINE/MIR	(64)	204	118	2140936
1714	18.8	4.6	10.4	chr2	158985358	158985641	(83207888)	C	LTR54B	LTR/ERV1	(2)	496	219	2140937
2196	12.8	0.3	0.0	chr2	158985642	158985939	(83207590)	C	AluSg	SINE/Alu	(10)	300	2	2140938
1544	18.7	13.9	5.7	chr2	160391071	160391495	(81802034)	+	MLT1C	LTR/ERVL-MaLR	1	466	(1)	2143007
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
3891	12.0	1.2	0.9	chr2	163953194	163953756	(78239773)	C	MER61E	LTR/ERV1	(4)	565	1	2147656
473	26.4	7.3	0.0	chr2	170527363	170527502	(71666027)	+	MER102b	DNA/hAT-Charlie	26	176	(165)	2156779
419	26.5	21.2	1.1	chr2	170527643	170527833	(71665696)	+	MIR	SINE/MIR	23	262	(0)	2156780
16683	11.6	4.8	1.8	chr2	170588446	170590164	(71603365)	+	Tigger3	DNA/TcMar-Tigger	1241	3029	(0)	2156884
3928	11.7	1.9	0.0	chr2	173291214	173291767	(68901762)	C	MER61E	LTR/ERV1	(4)	565	1	2161426
17796	23.5	8.8	8.7	chr2	173291779	173293993	(68899536)	C	LTR25-int	LTR/ERV1	(2)	7186	4961	2161426
4052	10.1	2.3	0.4	chr2	173300204	173300761	(68892768)	C	MER61E	LTR/ERV1	(0)	569	1	2161426
1001	19.2	7.2	1.5	chr2	173300762	173300959	(68892570)	+	AluJb	SINE/Alu	85	294	(18)	2161432
14	20.2	4.3	2.0	chr2	173354872	173354918	(68838611)	+	(GCT)n	Simple_repeat	1	49	(0)	2161545
2125	19.1	1.4	0.5	chr2	173512003	173512428	(68681101)	+	MER65C	LTR/ERV1	27	456	(5)	2161802
1271	28.8	5.7	3.2	chr2	173815733	173816228	(68377301)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	4	2162221
1998	22.7	5.9	2.2	chr2	173816515	173817005	(68376524)	C	MLT1H1	LTR/ERVL-MaLR	(45)	510	1	2162222
391	30.5	6.7	16.5	chr2	176721731	176722166	(65471363)	C	L2b	LINE/L2	(8)	3379	2990	2166552
18	17.8	2.2	2.1	chr2	178072727	178072772	(64120757)	+	(GCT)n	Simple_repeat	1	47	(0)	2168498
202	29.2	2.8	8.6	chr2	178315772	178315887	(63877642)	C	MER5A	DNA/hAT-Charlie	(75)	114	6	2168931
2372	22.5	14.1	1.8	chr2	183185317	183186256	(59007273)	C	L1M2	LINE/L1	(5791)	1058	2	2175059
576	26.0	14.8	1.9	chr2	192807771	192808029	(49385500)	C	LTR25	LTR/ERV1	(127)	717	420	2187698
276	20.0	12.2	0.0	chr2	192808007	192808071	(49385458)	C	MER51A	LTR/ERV1	(353)	281	208	2187699
225	34.2	0.0	0.0	chr2	192808066	192808141	(49385388)	C	MER61E	LTR/ERV1	(906)	223	148	2187700
470	17.3	4.0	1.2	chr2	192808229	192808354	(49385175)	C	MER61E	LTR/ERV1	(485)	130	1	2187700
287	33.3	0.0	0.0	chr2	192808355	192808420	(49385109)	C	MER58D	DNA/hAT-Charlie	(314)	72	7	2187701
868	30.7	10.8	7.2	chr2	192808430	192809316	(49384213)	C	MLT1H-int	LTR/ERVL-MaLR	(442)	1047	64	2187702
2138	17.1	5.0	4.8	chr2	195811937	195812391	(46381138)	+	LTR8A	LTR/ERV1	272	727	(0)	2191507
4740	16.2	6.7	2.0	chr2	196977246	196978058	(45215471)	+	L1MB7	LINE/L1	4993	5840	(344)	2193191
2437	12.1	8.5	2.0	chr2	196978059	196978456	(45215073)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	2193193
13	20.0	2.0	5.8	chr2	197892322	197892372	(44301157)	+	(ACTG)n	Simple_repeat	1	52	(0)	2194738
13	29.3	0.0	0.0	chr2	199911453	199911494	(42282035)	+	(GCT)n	Simple_repeat	1	42	(0)	2197520
1988	15.3	2.6	0.5	chr2	199923454	199923835	(42269694)	+	Charlie5	DNA/hAT-Charlie	2235	2624	(0)	2197548
331	21.9	9.3	3.0	chr2	199923837	199923968	(42269561)	+	L2a	LINE/L2	3230	3375	(0)	2197549
3459	12.8	2.2	4.1	chr2	204763991	204764545	(37428984)	C	MER61E	LTR/ERV1	(25)	544	1	2206056
33	0.0	0.0	0.0	chr2	204764716	204764743	(37428786)	+	(GT)n	Simple_repeat	1	28	(0)	2206057
1923	13.8	2.6	1.7	chr2	205966985	205967282	(36226247)	C	AluJr	SINE/Alu	(10)	302	2	2207703
328	35.2	13.7	0.0	chr2	206764333	206764528	(35429001)	C	L2	LINE/L2	(1333)	2086	1860	2209079
276	41.1	2.8	2.0	chr2	206764539	206764786	(35428743)	+	L2c	LINE/L2	2713	2962	(457)	2209083
301	30.9	8.5	4.7	chr2	206764809	206765136	(35428393)	+	L2c	LINE/L2	3062	3422	(4)	2209083
14	9.1	0.0	0.0	chr2	216636902	216636925	(25556604)	+	(GGCA)n	Simple_repeat	1	24	(0)	2223162
28	0.0	0.0	0.0	chr2	216636926	216636952	(25556577)	+	(GGCG)n	Simple_repeat	1	27	(0)	2223163
242	9.8	0.0	6.8	chr2	216637084	216637127	(25556402)	C	UCON47	Unknown	(0)	165	125	2223164
13	8.5	4.0	0.0	chr2	217434119	217434143	(24759386)	+	(AGA)n	Simple_repeat	1	26	(0)	2224389
664	32.4	12.4	2.6	chr2	217975598	217976277	(24217252)	+	L2a	LINE/L2	2453	3405	(21)	2225267
191	16.1	13.8	0.0	chr2	217976267	217976322	(24217207)	+	L3b	LINE/CR1	5136	5200	(32)	2225268
365	33.7	3.2	6.7	chr2	218093079	218093466	(24100063)	C	L2c	LINE/L2	(273)	3114	2730	2225466
20	13.8	2.5	0.0	chr2	218093467	218093506	(24100023)	+	GA-rich	Low_complexity	1	41	(0)	2225467
660	27.7	6.0	0.0	chr2	218093518	218093705	(24099824)	C	MIR	SINE/MIR	(35)	227	28	2225468
12	22.1	0.0	0.0	chr2	219176901	219176932	(23016597)	+	(TGCC)n	Simple_repeat	1	32	(0)	2227457
14	16.4	2.9	0.0	chr2	219176946	219176979	(23016550)	+	(CGCCCT)n	Simple_repeat	1	35	(0)	2227458
2281	10.5	0.0	0.9	chr2	222691193	222691507	(19502022)	C	AluSq2	SINE/Alu	(0)	313	2	2233000
354	31.6	6.4	4.4	chr2	222691971	222692308	(19501221)	C	L2	LINE/L2	(473)	2946	2602	2233001
213	25.0	5.0	1.3	chr2	230158223	230158299	(12035230)	C	L2a	LINE/L2	(586)	2833	2754	2244824
3870	10.8	4.8	0.0	chr2	230158577	230159113	(12034416)	+	MER61E	LTR/ERV1	2	565	(4)	2244825
11754	9.4	0.6	0.2	chr2	231091466	231093122	(11100407)	C	HERVK22-int	LTR/ERVK	(1)	6836	5173	2246220
323	24.2	3.2	0.0	chr2	231831755	231831843	(10361686)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247712
351	23.2	2.0	2.0	chr2	231831871	231831971	(10361558)	+	MER20	DNA/hAT-Charlie	119	219	(0)	2247712
328	25.0	2.1	0.0	chr2	231831972	231832061	(10361468)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247712
364	22.7	1.1	0.0	chr2	231832103	231832190	(10361339)	+	MER20	DNA/hAT-Charlie	131	219	(0)	2247713
310	24.2	3.2	0.0	chr2	231832191	231832279	(10361250)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247713
268	25.3	2.2	0.0	chr2	231832282	231832368	(10361161)	+	MER20	DNA/hAT-Charlie	131	219	(0)	2247713
339	22.0	3.2	0.0	chr2	231832369	231832457	(10361072)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247713
326	23.1	3.2	0.0	chr2	231832458	231832546	(10360983)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247713
697	25.2	9.2	7.0	chr2	232062477	232063031	(10130498)	C	L1ME1	LINE/L1	(1017)	7025	6458	2248126
11	20.5	5.1	0.0	chr2	232063112	232063150	(10130379)	+	(GGCTCCT)n	Simple_repeat	1	41	(0)	2248127
266	36.8	6.2	3.4	chr2	233383780	233384074	(8809455)	+	L1ME4a	LINE/L1	5619	5922	(202)	2250454
1940	9.9	12.2	0.0	chr2	234235648	234235920	(7957609)	+	AluSc8	SINE/Alu	1	311	(0)	2251618
353	18.7	0.0	13.0	chr2	234235921	234235949	(7957580)	+	MLT1D	LTR/ERVL-MaLR	79	105	(400)	2251617
782	21.7	5.8	1.1	chr2	234236096	234236277	(7957252)	+	MLT1D	LTR/ERVL-MaLR	176	366	(139)	2251617
12	13.9	0.0	0.0	chr2	234236342	234236365	(7957164)	+	(CCCT)n	Simple_repeat	1	24	(0)	2251619
467	25.1	12.0	7.4	chr2	234236593	234236988	(7956541)	C	L1M6	LINE/L1	(4729)	1767	1157	2251620
802	22.5	6.5	6.5	chr2	234456221	234456494	(7737035)	+	MLT1C	LTR/ERVL-MaLR	8	281	(186)	2252004
1294	15.0	5.8	19.2	chr2	234456495	234457101	(7736428)	C	MER34C2	LTR/ERV1	(0)	787	37	2252005
372	33.9	1.7	0.8	chr2	237385458	237385576	(4807953)	C	MIR3	SINE/MIR	(46)	162	43	2256286
306	28.8	6.3	13.6	chr2	237642300	237642830	(4550699)	+	L1M3e	LINE/L1	1147	1636	(5394)	2256646
13	24.8	4.2	0.0	chr2	237642859	237642906	(4550623)	+	(TCCAGGC)n	Simple_repeat	1	50	(0)	2256647
2340	10.3	0.0	1.0	chr2	237861566	237861865	(4331664)	+	AluSq2	SINE/Alu	1	297	(16)	2256961
321	26.0	13.3	1.2	chr2	238144190	238144350	(4049179)	C	MIRb	SINE/MIR	(79)	189	1	2257411
74	0.0	0.0	0.0	chr2	238144370	238144435	(4049094)	+	(GGAA)n	Simple_repeat	1	66	(0)	2257412
43	1.9	0.0	0.0	chr2	238144436	238144488	(4049041)	+	(CAGG)n	Simple_repeat	1	53	(0)	2257413
2142	12.3	0.3	0.7	chr2	238629774	238630073	(3563456)	+	AluSq2	SINE/Alu	3	301	(12)	2258054
328	32.6	11.4	2.0	chr2	241279402	241279701	(913828)	+	L1ME3G	LINE/L1	4644	4975	(1171)	2260903
500	27.5	5.6	3.8	chr2	241279700	241279911	(913618)	+	L1ME3Cz	LINE/L1	321	536	(461)	2260909
2349	8.1	0.0	2.8	chr20	398971	399290	(64044877)	C	AluSx	SINE/Alu	(1)	311	1	2262855
397	25.0	3.1	16.7	chr20	399291	399357	(64044810)	+	MLT1H	LTR/ERVL-MaLR	485	549	(0)	2262854
188	18.2	8.3	5.2	chr20	399358	399415	(64044752)	+	L2b	LINE/L2	3274	3333	(42)	2262856
396	29.7	3.5	6.1	chr20	399560	399706	(64044461)	C	MIRb	SINE/MIR	(39)	229	87	2262857
1192	29.1	12.5	1.7	chr20	406838	407578	(64036589)	C	L2a	LINE/L2	(0)	3426	2581	2262879
776	22.2	5.4	4.0	chr20	2617444	2617589	(61826578)	+	MER3	DNA/hAT-Charlie	5	152	(57)	2267290
2175	9.8	1.6	0.7	chr20	4212371	4212676	(60231491)	+	AluSp	SINE/Alu	1	309	(4)	2270373
346	25.4	0.8	6.2	chr20	4212769	4212898	(60231269)	+	L2a	LINE/L2	2628	2750	(669)	2270374
902	27.3	15.3	1.1	chr20	4212886	4213259	(60230908)	+	L2a	LINE/L2	2990	3426	(0)	2270374
320	20.6	12.6	1.0	chr20	8647368	8647465	(55796702)	C	L1M5	LINE/L1	(455)	5718	5608	2277595
934	22.8	10.0	5.3	chr20	8647527	8647868	(55796299)	+	L1ME3A	LINE/L1	5813	6172	(1)	2277596
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
2165	11.7	0.7	0.0	chr20	29744938	29745237	(34698930)	+	AluSp	SINE/Alu	1	302	(11)	2304492
32	2.9	0.0	0.0	chr20	29745304	29745338	(34698829)	+	(CTGC)n	Simple_repeat	1	35	(0)	2304493
720	13.9	0.0	13.2	chr20	29745340	29745505	(34698662)	C	AluJb	SINE/Alu	(32)	280	137	2304494
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
27	2.7	2.6	0.0	chr20	30404146	30404183	(34039984)	+	(CTCCCT)n	Simple_repeat	1	39	(0)	2305006
5501	9.7	4.4	1.4	chr20	30404192	30405254	(34038913)	+	SVA_D	Retroposon/SVA	3	870	(517)	2305007
26	0.0	0.0	0.0	chr20	30490888	30490912	(33953255)	+	(CTGC)n	Simple_repeat	1	25	(0)	2305044
712	16.8	0.0	13.2	chr20	30490916	30491082	(33953085)	C	AluJb	SINE/Alu	(32)	280	136	2305045
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
1030	9.4	0.8	0.0	chr20	30866424	30866600	(33577567)	+	BSR/Beta	Satellite	1	178	(0)	2305529
46	27.1	2.6	6.6	chr20	32483590	32483856	(31960311)	+	GA-rich	Low_complexity	1	274	(0)	2308513
268	21.1	1.4	2.7	chr20	34581960	34582032	(29862135)	C	UCON73	Unknown	(0)	105	34	2313381
2119	24.9	7.3	3.9	chr20	37838179	37838606	(26605561)	C	L2a	LINE/L2	(538)	2881	2431	2320870
1952	15.8	2.3	0.0	chr20	37838607	37838903	(26605264)	+	AluJb	SINE/Alu	2	305	(7)	2320871
2119	24.9	7.3	3.9	chr20	37838904	37839134	(26605033)	C	L2a	LINE/L2	(989)	2430	2198	2320870
532	26.4	3.1	7.6	chr20	42555292	42555529	(21888638)	C	L2a	LINE/L2	(48)	3378	3152	2329475
303	31.8	9.8	6.6	chr20	42555649	42555965	(21888202)	+	MLT1I	LTR/ERVL-MaLR	71	398	(13)	2329476
2659	15.5	3.0	3.9	chr20	44960939	44961401	(19482766)	C	MER65C	LTR/ERV1	(0)	461	3	2334746
455	34.8	11.7	1.9	chr20	44961429	44961844	(19482323)	+	L2c	LINE/L2	2920	3381	(6)	2334747
2600	10.9	0.0	0.0	chr20	45279610	45279959	(19164208)	C	L1PA13	LINE/L1	(0)	6163	5814	2335291
228	33.0	5.0	8.8	chr20	45279960	45280142	(19164025)	+	L2-3_Crp	LINE/L2	341	525	(710)	2335290
631	27.4	4.0	0.0	chr20	45280176	45280343	(19163824)	+	L2	LINE/L2	2467	2641	(778)	2335287
18	12.1	6.4	2.0	chr20	45348465	45348511	(19095656)	+	(CCGGCC)n	Simple_repeat	1	50	(0)	2335450
341	23.2	4.7	0.0	chr20	45348676	45348757	(19095410)	C	MIR3	SINE/MIR	(34)	174	89	2335451
1436	14.0	4.3	8.8	chr20	45348843	45349096	(19095071)	C	MER58B	DNA/hAT-Charlie	(0)	341	79	2335452
2227	13.0	0.0	0.0	chr20	47780016	47780316	(16663851)	C	AluSz	SINE/Alu	(11)	301	1	2340830
846	25.3	3.8	2.7	chr20	47780317	47780537	(16663630)	+	L2a	LINE/L2	2974	3198	(228)	2340827
2246	10.9	0.0	1.0	chr20	47780550	47780853	(16663314)	C	AluSz6	SINE/Alu	(11)	301	1	2340831
3552	11.0	0.2	2.5	chr20	47992898	47993420	(16450747)	C	MER61E	LTR/ERV1	(58)	511	1	2341250
1853	15.2	1.0	2.0	chr20	50079646	50079789	(14364378)	C	AluJb	SINE/Alu	(171)	141	1	2346042
237	30.2	4.1	2.5	chr20	50169330	50169448	(14274719)	+	L1MC	LINE/L1	5623	5743	(2139)	2346258
461	27.4	4.8	8.7	chr20	50169704	50169811	(14274356)	+	MIRb	SINE/MIR	41	154	(114)	2346259
2409	9.0	0.0	0.0	chr20	50169812	50170112	(14274055)	+	AluSg	SINE/Alu	1	301	(9)	2346260
254	13.5	0.0	0.0	chr20	51126684	51126720	(13317447)	+	MER8	DNA/TcMar-Tigger	30	66	(173)	2348470
1229	14.3	8.3	0.9	chr20	51126708	51126940	(13317227)	+	Tigger2	DNA/TcMar-Tigger	2267	2518	(200)	2348471
274	31.9	5.8	2.6	chr20	51307089	51307204	(13136963)	C	MIRb	SINE/MIR	(6)	262	143	2348864
1151	27.0	6.2	8.2	chr20	51977868	51978107	(12466060)	+	MLT1D	LTR/ERVL-MaLR	5	217	(288)	2350431
3732	10.6	1.8	8.7	chr20	51978108	51978532	(12465635)	+	MER61E	LTR/ERV1	1	385	(184)	2350432
170	21.3	0.5	0.8	chr20	53469552	53469919	(10974248)	+	GA-rich	Low_complexity	1	370	(0)	2353535
27	0.0	0.0	0.0	chr20	53469920	53469945	(10974222)	+	(AGGC)n	Simple_repeat	1	26	(0)	2353536
3476	15.4	3.2	3.6	chr20	54452223	54452798	(9991369)	+	MER50	LTR/ERV1	133	711	(23)	2355712
265	10.0	0.0	0.0	chr20	54452800	54452839	(9991328)	+	MER67A	LTR/ERV1	41	80	(463)	2355711
2657	21.2	2.4	3.4	chr20	54452840	54453507	(9990660)	+	MER67B	LTR/ERV1	1	661	(0)	2355714
474	33.9	1.2	0.4	chr20	56128942	56129187	(8314980)	C	MIR	SINE/MIR	(12)	250	3	2358451
200	23.3	6.4	5.2	chr20	56765454	56765530	(7678637)	C	L3	LINE/CR1	(48)	4051	3974	2359804
380	25.4	10.1	2.5	chr20	57545823	57545997	(6898170)	C	MIR	SINE/MIR	(71)	197	13	2361382
2340	9.2	0.3	0.0	chr20	58681141	58681434	(5762733)	+	AluSz	SINE/Alu	1	295	(17)	2363324
2385	7.5	0.3	0.0	chr20	58681435	58681727	(5762440)	+	AluY	SINE/Alu	2	295	(16)	2363325
13	7.9	11.9	2.1	chr20	62012223	62012264	(2431903)	+	(GGCAGGT)n	Simple_repeat	1	47	(0)	2367998
12	17.6	5.0	2.4	chr20	62937394	62937433	(1506734)	+	(CCCCG)n	Simple_repeat	1	42	(0)	2369114
43	27.1	2.9	4.7	chr20	63216006	63216212	(1227955)	+	(GGC)n	Simple_repeat	1	213	(0)	2369380
254	28.0	4.8	0.0	chr20	63270957	63271056	(1173111)	+	LTR16C	LTR/ERVL	5	109	(380)	2369445
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
312	38.2	6.5	3.6	chr21	8419786	8420171	(38289812)	C	HAL1	LINE/L1	(1230)	1277	880	2373573
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
25399	0.2	1.5	0.8	chr21	8441146	8441992	(38267991)	+	LSU-rRNA_Hsa	rRNA	1	877	(4158)	2373624
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
866	22.9	2.9	9.3	chr21	8993281	8993613	(37716370)	C	L1MB8	LINE/L1	(36)	6142	5832	2374113
334	30.3	5.3	0.0	chr21	9246374	9246462	(37463521)	+	AluYa8	SINE/Alu	185	278	(32)	2374337
436	12.7	0.0	0.0	chr21	9246781	9246835	(37463148)	+	AluYj4	SINE/Alu	225	279	(32)	2374338
404	15.6	1.5	0.0	chr21	9247151	9247214	(37462769)	+	AluYj4	SINE/Alu	224	288	(23)	2374339
344	25.4	19.9	9.6	chr21	9251968	9252197	(37457786)	+	LTR48B	LTR/ERV1	238	500	(144)	2374350
27	0.0	3.3	0.0	chr21	9252198	9252227	(37457756)	+	(TGTTT)n	Simple_repeat	1	31	(0)	2374351
344	27.8	10.8	10.4	chr21	9252228	9252365	(37457618)	+	LTR48B	LTR/ERV1	501	630	(14)	2374350
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
404	28.3	11.0	2.7	chr21	10427070	10427382	(36282601)	C	L2c	LINE/L2	(213)	3174	2827	2375541
25	15.4	0.0	0.0	chr21	10427515	10427557	(36282426)	+	(CA)n	Simple_repeat	1	43	(0)	2375542
620	23.1	11.5	2.4	chr21	10427740	10427952	(36282031)	C	MIR	SINE/MIR	(11)	251	17	2375543
3943	22.6	6.2	5.6	chr21	15742711	15743779	(30966204)	C	LTR27E	LTR/ERV1	(0)	1077	7	2379561
226	12.2	8.9	0.0	chr21	15743821	15743861	(30966122)	C	LTR27D	LTR/ERV1	(570)	45	1	2379562
299	33.1	0.0	5.9	chr21	16889330	16889464	(29820519)	+	LTR37-int	LTR/ERV1	3261	3387	(1831)	2380983
1653	20.1	0.3	0.0	chr21	16889479	16889762	(29820221)	C	AluJr	SINE/Alu	(12)	300	16	2380984
352	19.8	13.5	8.6	chr21	20213239	20213343	(26496640)	C	LTR25	LTR/ERV1	(344)	500	390	2385354
279	24.6	0.0	0.0	chr21	20213340	20213404	(26496579)	C	MER61E	LTR/ERV1	(544)	223	159	2385355
394	19.0	7.1	1.5	chr21	20213512	20213621	(26496362)	C	MER61E	LTR/ERV1	(649)	118	1	2385355
338	34.3	4.6	7.4	chr21	20213794	20213833	(26496150)	C	MLT1J	LTR/ERVL-MaLR	(48)	464	428	2385356
3878	12.0	1.4	1.1	chr21	26441026	26441467	(20268516)	C	MER61E	LTR/ERV1	(128)	441	1	2394010
500	28.3	4.6	0.0	chr21	32279316	32279460	(14430523)	C	MER5A	DNA/hAT-Charlie	(10)	179	28	2402943
18	9.7	3.0	0.0	chr21	39183299	39183331	(7526652)	+	(CCT)n	Simple_repeat	1	34	(0)	2414124
372	19.0	2.7	1.0	chr21	39350167	39350262	(7359721)	+	L1ME4b	LINE/L1	700	820	(104)	2414413
199	22.6	1.9	0.0	chr21	39350362	39350414	(7359569)	C	L2b	LINE/L2	(13)	3362	3309	2414414
297	29.2	0.0	0.0	chr21	41571793	41571881	(5138102)	C	L1MA10	LINE/L1	(1)	6333	6245	2417664
2070	17.5	9.3	1.2	chr21	41571882	41572080	(5137903)	C	MER74C	LTR/ERVL	(0)	460	252	2417665
2281	12.1	9.5	3.9	chr21	41572081	41572467	(5137516)	C	MER57D	LTR/ERV1	(0)	411	1	2417666
190	27.6	3.2	0.0	chr21	42628222	42628287	(4081696)	C	MIR3	SINE/MIR	(101)	107	33	2419109
2305	10.2	0.3	0.0	chr21	44015611	44015913	(2694070)	C	AluSx	SINE/Alu	(8)	304	1	2421185
3097	24.7	10.4	4.5	chr21	45232882	45234180	(1475803)	+	Charlie2a	DNA/hAT-Charlie	1142	2536	(325)	2422663
6545	17.2	8.7	3.2	chr21	46584993	46585271	(124712)	+	L1M4b	LINE/L1	4445	4760	(2246)	2424152
433	15.8	3.8	0.0	chr21	46585274	46585359	(124624)	+	LTR27C	LTR/ERV1	30	104	(1159)	2424158
1217	13.6	0.5	0.5	chr21	46585363	46585547	(124436)	+	L1PB1	LINE/L1	252	436	(6426)	2424159
414	31.9	5.8	1.0	chr21	46675063	46675314	(34669)	+	L2a	LINE/L2	2836	3105	(321)	2424260
1805	11.3	0.0	4.7	chr21	46675315	46675588	(34395)	C	AluSx1	SINE/Alu	(8)	304	44	2424261
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
530	23.4	6.1	1.9	chr22	11572555	11572711	(39245757)	+	MIRb	SINE/MIR	33	196	(72)	2425189
620	16.9	0.0	13.2	chr22	11626425	11626590	(39191878)	+	AluJb	SINE/Alu	137	280	(32)	2425279
37	2.6	0.0	0.0	chr22	11626592	11626630	(39191838)	+	(CAGG)n	Simple_repeat	1	39	(0)	2425280
2050	11.4	0.3	2.0	chr22	11626697	11626994	(39191474)	C	AluSp	SINE/Alu	(20)	293	1	2425281
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
1249	21.0	6.5	1.2	chr22	11896731	11897053	(38921415)	C	L1MB8	LINE/L1	(5)	6173	5833	2425507
2301	14.0	7.0	0.5	chr22	11897054	11897465	(38921003)	C	MER61C	LTR/ERV1	(0)	428	4	2425508
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
29	11.0	0.0	0.0	chr22	18063979	18064009	(32754459)	+	(CTGC)n	Simple_repeat	1	31	(0)	2430153
83	1.2	1.2	0.0	chr22	18064010	18064090	(32754378)	+	(CCTT)n	Simple_repeat	1	82	(0)	2430154
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
33	28.0	2.7	3.3	chr22	21867413	21867558	(28950910)	+	(CCG)n	Simple_repeat	1	150	(0)	2436079
12	9.8	0.0	0.0	chr22	21867625	21867646	(28950822)	+	(TGCC)n	Simple_repeat	1	22	(0)	2436080
19	24.2	1.7	1.6	chr22	21867648	21867707	(28950761)	+	G-rich	Low_complexity	1	61	(0)	2436081
2367	9.3	0.0	0.0	chr22	24722080	24722381	(26096087)	C	AluY	SINE/Alu	(9)	302	1	2440532
464	21.4	4.8	0.0	chr22	25019993	25020090	(25798378)	C	L1ME4c	LINE/L1	(364)	466	364	2441263
522	28.4	5.8	6.2	chr22	25020107	25020350	(25798118)	+	MIRb	SINE/MIR	12	254	(14)	2441264
225	32.8	4.7	5.4	chr22	27674209	27674337	(23144131)	+	MER5B	DNA/hAT-Charlie	51	178	(0)	2447267
4015	10.3	1.8	0.0	chr22	28315771	28316325	(22502143)	C	MER61E	LTR/ERV1	(4)	565	1	2448319
2434	21.5	5.9	3.6	chr22	28316326	28316769	(22501699)	C	L1MD2	LINE/L1	(1374)	5170	4709	2448318
2035	14.5	0.0	1.3	chr22	28731936	28732108	(22086360)	C	AluSx1	SINE/Alu	(6)	306	137	2449057
2518	6.6	0.3	0.0	chr22	28732109	28732410	(22086058)	C	AluSp	SINE/Alu	(10)	303	1	2449058
511	22.8	1.6	0.8	chr22	30238924	30239051	(20579417)	C	MER5A1	DNA/hAT-Charlie	(6)	160	32	2452220
328	32.6	1.3	10.8	chr22	31094987	31095128	(19723340)	+	MIR	SINE/MIR	137	255	(7)	2454003
490	25.4	8.5	2.3	chr22	36448542	36448718	(14369750)	+	MIRb	SINE/MIR	44	232	(36)	2465077
398	32.2	9.1	1.3	chr22	36448802	36448952	(14369516)	C	MIRb	SINE/MIR	(18)	250	87	2465078
543	19.4	3.0	3.7	chr22	36449543	36449676	(14368792)	+	MIR3	SINE/MIR	24	156	(52)	2465079
2158	11.4	1.4	1.0	chr22	38983037	38983333	(11835135)	+	AluSx4	SINE/Alu	1	298	(12)	2470651
245	24.1	2.0	2.0	chr22	39144733	39144810	(11673658)	+	MIR3	SINE/MIR	80	157	(105)	2470985
434	29.2	1.9	2.5	chr22	39144849	39145006	(11673462)	C	MIR	SINE/MIR	(78)	184	28	2470986
35	22.7	4.7	3.0	chr22	39177884	39178011	(11640457)	+	(TGCC)n	Simple_repeat	1	134	(0)	2471058
316	27.2	13.6	1.5	chr22	39524718	39524973	(11293495)	+	L2a	LINE/L2	2932	3393	(33)	2471822
222	34.0	5.7	0.0	chr22	39525011	39525110	(11293358)	C	MIR	SINE/MIR	(45)	217	112	2471823
27	16.6	1.3	6.3	chr22	40477789	40477866	(10340602)	+	A-rich	Low_complexity	1	79	(0)	2473633
1592	15.4	1.1	0.0	chr22	40478218	40478476	(10339992)	+	L1MD3	LINE/L1	7729	7990	(5)	2473634
301	25.2	12.4	2.0	chr22	40989594	40989694	(9828774)	+	LTR81A	LTR/Gypsy	97	209	(1141)	2474835
482	26.5	6.4	16.3	chr22	40989703	40989830	(9828638)	C	L2a	LINE/L2	(0)	3426	3329	2474836
2082	10.3	1.0	1.0	chr22	40989831	40990120	(9828348)	+	AluSq2	SINE/Alu	9	298	(15)	2474837
16	13.2	0.0	0.0	chr22	41681970	41682007	(9136461)	+	(T)n	Simple_repeat	1	38	(0)	2476499
1881	9.2	10.9	0.0	chr22	41682687	41682948	(9135520)	C	AluSx1	SINE/Alu	(18)	294	1	2476500
1973	13.2	2.1	1.7	chr22	41855241	41855529	(8962939)	+	AluSx1	SINE/Alu	1	290	(22)	2476939
958	24.6	4.1	10.9	chr22	41855530	41855755	(8962713)	C	LTR37B	LTR/ERV1	(199)	269	75	2476938
1491	15.0	0.4	11.1	chr22	41855756	41856061	(8962407)	C	AluJr	SINE/Alu	(13)	299	27	2476940
2102	10.3	5.2	0.3	chr22	41911740	41912030	(8906438)	C	AluSx1	SINE/Alu	(6)	306	1	2477042
187	26.8	11.8	2.4	chr22	41912134	41912217	(8906251)	+	MIR3	SINE/MIR	28	120	(88)	2477043
309	16.3	6.5	10.4	chr22	42091574	42091669	(8726799)	C	MIRc	SINE/MIR	(34)	196	103	2477409
12	8.1	3.6	3.5	chr22	42317895	42317922	(8500546)	+	(CCTG)n	Simple_repeat	1	29	(0)	2477787
11	12.4	3.6	10.5	chr22	42317935	42317989	(8500479)	+	(CAGGCC)n	Simple_repeat	1	57	(0)	2477788
211	23.8	0.0	0.0	chr22	42688155	42688196	(8130272)	C	MIRc	SINE/MIR	(181)	87	46	2478686
2274	8.5	2.0	0.3	chr22	42857684	42857978	(7960490)	C	AluSx	SINE/Alu	(11)	301	2	2479093
137	29.2	1.0	0.0	chr22	48843310	48843697	(1974771)	+	(GGTGTGG)n	Simple_repeat	1	392	(0)	2488672
1461	26.7	4.8	4.2	chr22	50024417	50024609	(793859)	+	L1MEd	LINE/L1	4734	4942	(1204)	2490074
1438	26.2	1.6	1.9	chr22	50024611	50025038	(793430)	C	MER65C	LTR/ERV1	(34)	427	1	2490080
326	21.5	0.0	0.0	chr22	50025039	50025117	(793351)	+	L1MEd	LINE/L1	4969	5047	(1099)	2490074
677	23.0	0.7	0.0	chr22	50025119	50025257	(793211)	+	L1MA3	LINE/L1	6166	6305	(0)	2490081
2184	16.2	4.7	5.7	chr3	5023801	5023848	(193271711)	C	L1MB4	LINE/L1	(0)	6180	6140	2500003
1748	17.5	0.3	0.3	chr3	5023849	5024133	(193271426)	C	AluJb	SINE/Alu	(17)	295	11	2500004
27	0.0	0.0	0.0	chr3	5251101	5251126	(193044433)	+	(TGCC)n	Simple_repeat	1	26	(0)	2500490
370	28.6	3.7	0.9	chr3	5251327	5251432	(193044127)	C	LTR16A1	LTR/ERVL	(337)	119	11	2500491
480	27.3	4.7	0.0	chr3	5254899	5255059	(193040500)	+	L2a	LINE/L2	2831	2999	(420)	2500498
2140	24.0	6.8	5.9	chr3	5255092	5255701	(193039858)	C	MLT1E2	LTR/ERVL-MaLR	(2)	625	10	2500499
10613	3.1	0.4	10.9	chr3	5283223	5284763	(193010796)	C	SVA_D	Retroposon/SVA	(1)	1385	7	2500558
1607	20.9	1.4	8.9	chr3	5284764	5285221	(193010338)	C	L1M1	LINE/L1	(4758)	2738	2316	2500553
16	11.6	5.8	5.5	chr3	9731434	9731485	(188564074)	+	G-rich	Low_complexity	1	55	(0)	2507837
30	26.0	0.0	2.3	chr3	9731741	9731827	(188563732)	+	(CGC)n	Simple_repeat	1	87	(0)	2507838
184	31.2	20.0	0.0	chr3	9976506	9976617	(188318942)	+	L3	LINE/CR1	3904	4043	(56)	2508391
1646	18.6	7.3	4.2	chr3	10155367	10155726	(188139833)	+	MER21A	LTR/ERVL	560	931	(0)	2508780
927	13.3	2.1	0.0	chr3	10155727	10155869	(188139690)	+	Tigger4b	DNA/TcMar-Tigger	216	361	(0)	2508784
17	23.0	2.1	0.0	chr3	11236594	11236640	(187058919)	+	(GAAT)n	Simple_repeat	1	48	(0)	2511067
18	18.4	2.7	0.0	chr3	11236700	11236736	(187058823)	+	(TA)n	Simple_repeat	1	38	(0)	2511068
225	22.6	1.6	10.1	chr3	13416430	13416498	(184879061)	+	LTR16A1	LTR/ERVL	179	241	(215)	2515196
275	26.9	12.8	2.5	chr3	13480905	13481064	(184814495)	+	MIRb	SINE/MIR	15	193	(75)	2515342
231	28.2	15.1	1.6	chr3	13509600	13509725	(184785834)	+	MIRb	SINE/MIR	1	146	(122)	2515398
12	16.1	0.0	7.5	chr3	13509986	13510025	(184785534)	+	(CCAGGCT)n	Simple_repeat	1	40	(0)	2515399
219	29.0	2.5	1.0	chr3	14452204	14452299	(183843260)	+	MIRb	SINE/MIR	47	146	(122)	2516986
20237	11.7	6.4	2.3	chr3	15551342	15553256	(182742303)	C	L1MA3	LINE/L1	(5520)	2045	16	2519035
526	36.2	13.5	2.5	chr3	15741243	15741697	(182553862)	+	L3	LINE/CR1	2637	3163	(936)	2519334
44	0.0	0.0	0.0	chr3	15741698	15741737	(182553822)	+	(T)n	Simple_repeat	1	40	(0)	2519335
526	36.2	13.5	2.5	chr3	15741738	15741800	(182553759)	+	L3	LINE/CR1	3164	3221	(878)	2519334
6485	8.0	3.1	4.3	chr3	15741801	15743355	(182552204)	+	SVA_D	Retroposon/SVA	70	1370	(17)	2519336
2098	12.6	13.1	0.8	chr3	15844822	15845196	(182450363)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2519488
1722	26.9	2.0	2.0	chr3	23628958	23629398	(174666161)	C	LTR16B2	LTR/ERVL	(1)	461	21	2530424
829	22.5	2.0	5.1	chr3	23629557	23629809	(174665750)	C	LTR85a	LTR/Gypsy?	(442)	260	16	2530425
1230	6.6	4.6	0.0	chr3	23701492	23701658	(174593901)	C	L1MA1	LINE/L1	(0)	6302	6128	2530580
2344	23.1	4.0	0.7	chr3	24520634	24521217	(173774342)	+	L1ME3A	LINE/L1	5511	6114	(59)	2532022
26	27.3	2.3	0.0	chr3	25889678	25889719	(172405840)	+	(TCCC)n	Simple_repeat	1	43	(0)	2533993
26	6.2	0.0	0.0	chr3	25889720	25889753	(172405806)	+	(CTGC)n	Simple_repeat	1	34	(0)	2533994
26	27.3	2.3	0.0	chr3	25889754	25889797	(172405762)	+	(TCCC)n	Simple_repeat	4	48	(0)	2533995
5036	13.2	2.2	4.7	chr3	34824105	34824963	(163470596)	+	LTR1A2	LTR/ERV1	1	837	(0)	2547896
2192	21.8	2.9	7.4	chr3	36148180	36148760	(162146799)	+	MLT2B3	LTR/ERVL	1	554	(0)	2549533
385	17.3	6.2	0.0	chr3	37543552	37543626	(160751933)	+	MADE2	DNA/TcMar-Mariner	1	80	(0)	2551735
2443	8.4	0.0	0.0	chr3	38398188	38398483	(159897076)	+	AluSx4	SINE/Alu	1	296	(14)	2553000
41	0.0	0.0	0.0	chr3	38398642	38398679	(159896880)	+	(CTGC)n	Simple_repeat	1	38	(0)	2553001
2150	9.2	0.3	7.1	chr3	38398743	38399068	(159896491)	+	AluSc	SINE/Alu	1	304	(5)	2553002
840	23.4	2.6	4.2	chr3	40924059	40924295	(157371264)	+	LTR33A_	LTR/ERVL	38	270	(261)	2556780
340	28.1	0.0	1.1	chr3	43162408	43162497	(155133062)	+	MER131	DNA?	34	122	(93)	2560237
499	23.4	13.5	0.0	chr3	44433736	44433889	(153861670)	+	MER45A	DNA/hAT-Tip100	1	178	(0)	2562091
40	0.0	0.0	0.0	chr3	45183422	45183458	(153112101)	+	(CAGG)n	Simple_repeat	1	37	(0)	2563390
220	27.9	1.6	0.0	chr3	45183632	45183692	(153111867)	C	L2b	LINE/L2	(3)	3372	3311	2563391
324	28.3	7.0	5.7	chr3	45766330	45766539	(152529020)	+	L1MEd	LINE/L1	618	830	(6273)	2564402
440	27.4	9.4	4.7	chr3	46027214	46027357	(152268202)	+	MER5A	DNA/hAT-Charlie	33	189	(0)	2564800
544	16.0	3.5	1.4	chr3	46027578	46027711	(152267848)	+	MER61E	LTR/ERV1	1	177	(551)	2564803
309	28.2	0.0	0.0	chr3	46027793	46027870	(152267689)	+	MER61E	LTR/ERV1	148	225	(904)	2564803
315	17.2	12.3	0.0	chr3	46027863	46027926	(152267633)	+	MER51A	LTR/ERV1	208	280	(354)	2564804
2222	9.0	0.0	1.4	chr3	47368159	47368476	(150927083)	C	AluSq	SINE/Alu	(0)	313	11	2567006
35	2.5	0.0	2.4	chr3	47368478	47368519	(150927040)	+	(TGCC)n	Simple_repeat	1	42	(0)	2567007
20	22.0	3.5	1.7	chr3	47368522	47368579	(150926980)	+	(CTT)n	Simple_repeat	1	60	(0)	2567008
1696	19.6	1.6	1.0	chr3	47368585	47368598	(150926961)	C	AluJo	SINE/Alu	(9)	303	290	2567009
29	0.0	0.0	0.0	chr3	47368599	47368623	(150926936)	+	(TC)n	Simple_repeat	1	25	(0)	2567010
1696	19.6	1.6	1.0	chr3	47368624	47368909	(150926650)	C	AluJo	SINE/Alu	(23)	289	1	2567009
221	33.1	3.2	5.7	chr3	49094659	49094850	(149200709)	+	L2b	LINE/L2	3015	3201	(174)	2570662
2520	8.1	0.0	0.0	chr3	49376363	49376670	(148918889)	+	AluY	SINE/Alu	2	309	(2)	2571203
2371	8.8	0.3	0.0	chr3	49376847	49377140	(148918419)	+	AluSp	SINE/Alu	1	295	(18)	2571204
2689	29.3	5.8	1.6	chr3	53568148	53569297	(144726262)	+	L2	LINE/L2	1200	2400	(1019)	2577829
554	24.9	16.2	1.5	chr3	55582863	55583062	(142712497)	+	MIRb	SINE/MIR	11	245	(23)	2580692
82	30.1	1.1	0.4	chr3	55583329	55583594	(142711965)	+	(GCCT)n	Simple_repeat	1	269	(0)	2580693
2157	11.3	0.3	0.3	chr3	56857976	56858266	(141437293)	+	AluJb	SINE/Alu	15	305	(7)	2582874
301	27.5	20.4	2.6	chr3	56858452	56858720	(141436839)	C	L2a	LINE/L2	(22)	3404	3076	2582875
2382	7.6	0.3	0.3	chr3	57681184	57681474	(140614085)	+	AluY	SINE/Alu	2	292	(19)	2584422
1338	15.2	0.9	2.3	chr3	57681475	57681634	(140613925)	+	AluJo	SINE/Alu	137	295	(17)	2584421
28	0.0	3.3	0.0	chr3	57681635	57681664	(140613895)	+	(AAAG)n	Simple_repeat	1	31	(0)	2584423
859	16.3	26.2	0.0	chr3	57681665	57682005	(140613554)	+	L1MB7	LINE/L1	5737	6178	(1)	2584419
2979	11.2	2.1	5.8	chr3	57820523	57821005	(140474554)	+	MER52-int	LTR/ERV1	1739	2203	(4888)	2584730
760	17.8	0.8	0.0	chr3	58000351	58000479	(140295080)	C	FLAM_A	SINE/Alu	(11)	131	2	2585156
320	33.8	9.8	5.9	chr3	60757240	60757877	(137537682)	C	L2a	LINE/L2	(1)	3425	2730	2589473
755	27.7	9.9	7.0	chr3	60757903	60758399	(137537160)	+	LTR33	LTR/ERVL	3	515	(0)	2589474
29	28.1	0.0	1.1	chr3	67654603	67654718	(130640841)	+	GA-rich	Low_complexity	1	114	(0)	2601160
12	19.6	0.0	0.0	chr3	67654708	67654736	(130640823)	+	(GGCCG)n	Simple_repeat	1	29	(0)	2601161
897	18.4	1.3	0.7	chr3	68883787	68883938	(129411621)	+	AluJr	SINE/Alu	137	289	(23)	2603096
28	3.3	0.0	0.0	chr3	68883941	68883971	(129411588)	+	(AGGC)n	Simple_repeat	1	31	(0)	2603097
302	29.1	1.4	0.0	chr3	68883985	68884083	(129411476)	+	L1M5	LINE/L1	5724	5829	(295)	2603098
1522	29.4	5.1	8.3	chr3	71513080	71513652	(126781907)	+	L2a	LINE/L2	2353	2902	(517)	2607348
1714	20.5	8.9	2.5	chr3	71513653	71514083	(126781476)	+	MER65C	LTR/ERV1	1	461	(0)	2607349
498	28.1	13.3	6.5	chr3	71721826	71722093	(126573466)	C	L2a	LINE/L2	(270)	3156	2872	2607697
585	27.1	12.0	6.3	chr3	71722095	71722498	(126573061)	C	L2a	LINE/L2	(824)	2595	2167	2607697
2396	27.3	8.8	2.8	chr3	71887740	71888450	(126407109)	+	L2	LINE/L2	1750	2520	(899)	2608008
320	21.9	0.0	9.6	chr3	75668819	75668954	(122626605)	C	LSAU	Satellite	(374)	124	2	2614560
369	30.8	6.7	0.7	chr3	84172480	84172760	(114122799)	+	L1M5	LINE/L1	3657	3955	(2191)	2625450
36	25.1	0.0	1.0	chr3	84958994	84959090	(113336469)	+	(GCCGCC)n	Simple_repeat	1	97	(0)	2626424
3308	12.8	5.8	1.5	chr3	97504177	97504716	(100790843)	C	MER61E	LTR/ERV1	(4)	565	1	2637887
239	24.2	7.5	8.0	chr3	97504723	97504884	(100790675)	C	L1ME4a	LINE/L1	(126)	5998	5838	2637888
280	28.2	19.0	0.0	chr3	97736916	97737128	(100558431)	+	LFSINE_Vert	SINE/tRNA	18	280	(179)	2638184
955	35.0	9.4	6.7	chr3	97737185	97738296	(100557263)	C	L2	LINE/L2	(528)	2891	1746	2638185
13	16.9	3.0	0.0	chr3	98901541	98901573	(99393986)	+	GA-rich	Low_complexity	1	34	(0)	2639606
2181	22.0	6.5	4.0	chr3	99808417	99808941	(98486618)	C	MLT1G3	LTR/ERVL-MaLR	(56)	539	1	2640741
468	30.7	4.4	3.8	chr3	100254381	100254539	(98041020)	C	MIR3	SINE/MIR	(19)	189	30	2641418
14	7.4	6.9	0.0	chr3	100605698	100605726	(97689833)	+	(TCACCC)n	Simple_repeat	1	31	(0)	2641963
35	0.0	0.0	0.0	chr3	100605793	100605825	(97689734)	+	(TGCC)n	Simple_repeat	1	33	(0)	2641964
41	2.0	0.0	0.0	chr3	100605826	100605875	(97689684)	+	(TCCT)n	Simple_repeat	1	50	(0)	2641965
2493	5.8	0.3	0.0	chr3	101686977	101687270	(96608289)	C	AluSp	SINE/Alu	(18)	295	1	2643440
1913	12.4	3.2	1.8	chr3	102742587	102742861	(95552698)	C	AluSx	SINE/Alu	(33)	279	1	2644963
37	12.1	0.0	6.2	chr3	102742864	102742882	(95552677)	+	(CTTC)n	Simple_repeat	1	18	(0)	2644964
42	2.4	0.0	0.0	chr3	102742883	102742925	(95552634)	+	(CCTG)n	Simple_repeat	1	43	(0)	2644965
37	12.1	0.0	6.2	chr3	102742926	102742986	(95552573)	+	(CTTC)n	Simple_repeat	3	60	(0)	2644966
197	26.8	9.9	4.7	chr3	108822075	108822160	(89473399)	C	MER5A	DNA/hAT-Charlie	(15)	174	84	2652843
208	32.8	14.1	0.0	chr3	108822099	108822214	(89473345)	+	MER5A	DNA/hAT-Charlie	55	189	(0)	2652844
197	38.0	1.8	4.4	chr3	115518840	115518952	(82776607)	+	MIR3	SINE/MIR	22	131	(77)	2662219
2350	10.6	0.3	0.0	chr3	119955642	119955952	(78339607)	C	AluSx1	SINE/Alu	(0)	312	1	2668410
280	15.5	0.0	0.2	chr3	123151727	123152201	(75143358)	+	(CCTG)n	Simple_repeat	1	475	(0)	2673232
181	30.1	2.6	4.4	chr3	123395915	123396717	(74898842)	+	GA-rich	Low_complexity	1	787	(0)	2673631
63	3.2	0.0	0.0	chr3	123396718	123396782	(74898777)	+	(GAAG)n	Simple_repeat	1	65	(0)	2673632
181	30.1	2.6	4.4	chr3	123396783	123396818	(74898741)	+	polypurine	Low_complexity	788	823	(0)	2673633
30	3.4	0.0	0.0	chr3	123396820	123396849	(74898710)	+	(GA)n	Simple_repeat	1	30	(0)	2673634
1717	16.9	4.6	0.4	chr3	124649492	124649609	(73645950)	+	AluJb	SINE/Alu	1	128	(184)	2675654
28	0.0	0.0	0.0	chr3	124649610	124649636	(73645923)	+	(AAAC)n	Simple_repeat	1	27	(0)	2675655
1717	16.9	4.6	0.4	chr3	124649637	124649790	(73645769)	+	AluJb	SINE/Alu	129	285	(27)	2675654
52	0.0	0.0	0.0	chr3	124649791	124649837	(73645722)	+	(ATAG)n	Simple_repeat	1	47	(0)	2675656
896	13.4	0.0	0.0	chr3	124649842	124649960	(73645599)	+	FLAM_C	SINE/Alu	1	119	(24)	2675657
4150	6.9	0.8	1.9	chr3	126096370	126096888	(72198671)	+	MER9a2	LTR/ERVK	1	513	(0)	2678119
4066	13.7	1.9	0.2	chr3	126096889	126097518	(72198041)	C	MER50B	LTR/ERV1	(56)	641	1	2678118
14	10.4	3.0	2.9	chr3	128188291	128188323	(70107236)	+	G-rich	Low_complexity	1	34	(0)	2681342
17	20.9	2.3	0.0	chr3	128188343	128188386	(70107173)	+	(GGCA)n	Simple_repeat	1	45	(0)	2681343
611	33.5	8.4	0.4	chr3	128383373	128383612	(69911947)	C	MIR	SINE/MIR	(0)	262	2	2681648
461	33.1	5.0	4.0	chr3	128383764	128384037	(69911522)	C	MER102a	DNA/hAT-Charlie	(9)	321	45	2681649
66	0.0	0.0	0.0	chr3	128580371	128580426	(69715133)	+	(TG)n	Simple_repeat	1	56	(0)	2681977
608	26.5	3.1	5.6	chr3	128580477	128580614	(69714945)	+	MLT1K	LTR/ERVL-MaLR	355	485	(110)	2681978
2471	6.9	0.7	0.0	chr3	128580615	128580917	(69714642)	C	AluY	SINE/Alu	(6)	305	1	2681979
939	22.5	12.6	0.4	chr3	128791496	128791767	(69503792)	C	LTR87	LTR/ERVL?	(12)	612	303	2682476
454	24.8	5.0	0.8	chr3	128791831	128791964	(69503595)	C	LTR87	LTR/ERVL?	(444)	180	41	2682476
2171	10.6	0.0	0.0	chr3	129172300	129172573	(69122986)	+	AluSx	SINE/Alu	1	274	(38)	2683194
79	3.7	0.0	0.0	chr3	129172577	129172659	(69122900)	+	(CAGG)n	Simple_repeat	1	83	(0)	2683195
30	0.0	0.0	0.0	chr3	129172660	129172695	(69122864)	+	(ACAG)n	Simple_repeat	1	36	(0)	2683196
44	0.0	0.0	0.0	chr3	129172696	129172733	(69122826)	+	(AC)n	Simple_repeat	1	38	(0)	2683197
339	18.6	21.1	1.0	chr3	136564709	136564806	(61730753)	+	L1M5	LINE/L1	5312	5434	(808)	2694595
383	20.3	3.0	12.9	chr3	136564809	136564955	(61730604)	+	L1MB5	LINE/L1	4972	5103	(1043)	2694596
57	0.0	0.0	0.0	chr3	136564964	136565014	(61730545)	+	(AGGA)n	Simple_repeat	1	51	(0)	2694597
22	0.0	0.0	0.0	chr3	136565015	136565041	(61730518)	+	(CAGG)n	Simple_repeat	1	27	(0)	2694598
57	0.0	0.0	0.0	chr3	136565043	136565093	(61730466)	+	(AGGG)n	Simple_repeat	1	51	(0)	2694599
38	5.9	6.5	2.4	chr3	136565094	136565166	(61730393)	+	(AGAGAA)n	Simple_repeat	4	79	(0)	2694600
1383	25.0	2.9	3.9	chr3	136685799	136686256	(61609303)	C	MER65C	LTR/ERV1	(8)	453	1	2694851
1492	25.5	2.2	3.6	chr3	136695937	136696404	(61599155)	C	MER65C	LTR/ERV1	(0)	461	1	2694866
1357	16.1	6.2	2.7	chr3	136696405	136696690	(61598869)	+	L1MC1	LINE/L1	6013	6310	(23)	2694867
155	0.7	2.5	0.6	chr3	137778794	137778950	(60516609)	+	(AAAG)n	Simple_repeat	1	161	(0)	2696498
1414	16.2	10.3	0.0	chr3	138648762	138649100	(59646459)	C	L1M2b	LINE/L1	(4498)	3068	2691	2697862
3233	22.9	10.8	3.4	chr3	138649127	138650366	(59645193)	C	L1M2b	LINE/L1	(5428)	2138	360	2697862
475	25.6	6.4	8.6	chr3	141646915	141647089	(56648470)	C	LTR33A	LTR/ERVL	(349)	171	1	2702626
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
244	24.4	14.3	0.0	chr3	144403276	144403353	(53892206)	C	L2c	LINE/L2	(21)	3366	3276	2707004
19	14.4	9.1	2.8	chr3	144403536	144403601	(53891958)	+	(AAT)n	Simple_repeat	1	72	(0)	2707005
22	24.3	1.4	2.3	chr3	147213976	147214050	(51081509)	+	A-rich	Low_complexity	1	74	(0)	2710538
4919	9.6	3.0	0.1	chr3	147214302	147215019	(51080540)	C	L1PA13	LINE/L1	(2)	6161	5423	2710539
6771	10.9	15.3	2.1	chr3	150471320	150471971	(47823588)	C	Tigger3b	DNA/TcMar-Tigger	(496)	735	1	2715273
415	25.8	2.5	11.7	chr3	150647673	150647746	(47647813)	C	MER5A1	DNA/hAT-Charlie	(90)	76	1	2715590
285	27.2	1.1	3.2	chr3	150647815	150647909	(47647650)	+	MER34A	LTR/ERV1	41	133	(438)	2715592
250	36.6	3.0	2.2	chr3	151146101	151146234	(47149325)	+	MER5A	DNA/hAT-Charlie	55	189	(0)	2716437
885	28.0	1.5	12.0	chr3	156243527	156243655	(42051904)	C	L1MD2	LINE/L1	(1668)	839	710	2723768
512	32.6	4.7	2.2	chr3	156243697	156243881	(42051678)	+	MLT2E	LTR/ERVL	30	219	(409)	2723772
237	30.8	15.5	1.6	chr3	156243878	156244065	(42051494)	+	LTR33C	LTR/ERVL	248	466	(163)	2723773
1498	19.0	11.2	1.3	chr3	156244077	156244529	(42051030)	C	MLT1D	LTR/ERVL-MaLR	(7)	498	1	2723774
223	24.8	4.7	10.6	chr3	156554653	156554765	(41740794)	C	MER5A	DNA/hAT-Charlie	(43)	146	41	2724195
443	29.6	3.6	1.2	chr3	157089356	157089516	(41206043)	C	MIR3	SINE/MIR	(5)	203	39	2724955
246	27.7	2.5	8.8	chr3	157248409	157248578	(41046981)	+	MamGypLTR2b	LTR/Gypsy	742	900	(22)	2725216
455	29.7	6.2	0.9	chr3	157248600	157248813	(41046746)	+	L4_A_Mam	LINE/RTE-X	4551	4776	(214)	2725217
1346	27.1	7.5	0.2	chr3	157248942	157249351	(41046208)	C	LTR16A	LTR/ERVL	(9)	442	1	2725218
1624	22.9	1.6	1.1	chr3	158955752	158956130	(39339429)	C	FordPrefect	DNA/hAT-Tip100	(0)	1683	1303	2727544
865	31.0	17.6	5.3	chr3	158956133	158956854	(39338705)	C	FordPrefect	DNA/hAT-Tip100	(752)	931	102	2727544
254	27.4	8.5	3.9	chr3	160187112	160187320	(38108239)	C	MLT1J	LTR/ERVL-MaLR	(0)	610	288	2729416
682	29.2	1.1	0.6	chr3	160187443	160187621	(38107938)	C	MER117	DNA/hAT-Charlie	(17)	180	1	2729417
1241	24.0	1.5	10.1	chr3	164350794	164351220	(33944339)	+	MER31B	LTR/ERV1	2	391	(75)	2734788
19	6.3	2.9	2.8	chr3	168831216	168831250	(29464309)	+	(TTGT)n	Simple_repeat	1	36	(0)	2740590
2320	10.6	0.0	0.3	chr3	168831402	168831702	(29463857)	+	AluSx1	SINE/Alu	1	300	(12)	2740591
17	9.4	2.6	2.6	chr3	171960827	171960857	(26334702)	+	(AAGG)n	Simple_repeat	3	33	(0)	2745355
2389	16.3	2.3	1.0	chr3	172548295	172548679	(25746880)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	2746280
13	20.0	0.0	2.8	chr3	194831196	194831231	(3464328)	+	GA-rich	Low_complexity	1	36	(0)	2781918
839	30.6	6.4	3.3	chr3	194831340	194831849	(3463710)	C	L2b	LINE/L2	(5)	3370	2842	2781919
617	32.3	2.5	1.0	chr3	195573401	195573594	(2721965)	+	L3	LINE/CR1	3876	4072	(27)	2783291
21	17.0	2.2	0.0	chr4	28431	28476	(190186079)	+	(TCTC)n	Simple_repeat	1	47	(0)	2788542
956	32.0	8.1	1.9	chr4	457242	457658	(189756897)	+	L1M3a	LINE/L1	10	454	(5501)	2789119
424	32.0	3.5	0.0	chr4	457661	457865	(189756690)	+	L1M3a	LINE/L1	550	736	(5219)	2789119
1773	28.4	4.1	5.5	chr4	457958	458565	(189755990)	+	L1M3a	LINE/L1	1875	2476	(5010)	2789120
380	22.3	8.9	0.0	chr4	2393590	2393701	(187820854)	C	L1ME3F	LINE/L1	(268)	5975	5853	2791497
15	10.4	6.7	4.2	chr4	8779020	8779087	(181435468)	+	(CCCCTG)n	Simple_repeat	1	69	(0)	2802292
255	28.4	4.2	1.5	chr4	15682368	15682517	(174532038)	C	L1ME3C	LINE/L1	(64)	6178	6022	2813057
3533	18.6	5.7	0.3	chr4	16143096	16143789	(174070766)	+	L1MB8	LINE/L1	5445	6178	(0)	2813864
1763	22.7	4.3	4.1	chr4	17687467	17687930	(172526625)	+	MLT1C	LTR/ERVL-MaLR	3	467	(0)	2816727
2161	5.5	0.0	7.2	chr4	19456818	19457109	(170757446)	+	AluY	SINE/Alu	34	304	(7)	2819506
1378	12.6	0.0	5.0	chr4	28351817	28352076	(161862479)	+	MER61E	LTR/ERV1	1	247	(322)	2833870
758	20.1	0.0	0.0	chr4	28352077	28352220	(161862335)	+	MER61E	LTR/ERV1	528	671	(5)	2833870
76	21.1	0.5	2.6	chr4	29804840	29804867	(160409688)	+	(CCTT)n	Simple_repeat	1	29	(0)	2835882
2476	6.2	0.0	0.3	chr4	29804868	29805156	(160409399)	C	AluYm1	SINE/Alu	(22)	289	2	2835883
76	21.1	0.5	2.6	chr4	29805157	29805318	(160409237)	+	(CCTT)n	Simple_repeat	2	158	(0)	2835884
85	23.4	1.4	1.8	chr4	30882046	30882265	(159332290)	+	(CTCCTC)n	Simple_repeat	1	223	(0)	2837312
1543	20.4	4.1	0.3	chr4	30882266	30882549	(159332006)	C	AluJr	SINE/Alu	(15)	297	3	2837313
3136	16.1	4.6	10.3	chr4	31847521	31848261	(158366294)	+	MER50B	LTR/ERV1	1	697	(0)	2838649
1146	30.2	3.9	2.8	chr4	37746036	37746495	(152468060)	+	MLT1J	LTR/ERVL-MaLR	13	477	(35)	2846601
776	29.8	2.0	9.1	chr4	38160634	38160984	(152053571)	+	MLT1I	LTR/ERVL-MaLR	102	410	(1)	2847301
448	32.6	6.1	9.0	chr4	38160986	38161342	(152053213)	+	L2c	LINE/L2	3041	3386	(1)	2847298
633	32.1	2.8	0.4	chr4	38926037	38926277	(151288278)	C	MIRc	SINE/MIR	(20)	248	2	2848651
29	21.1	1.5	0.0	chr4	38926428	38926457	(151288098)	+	(CT)n	Simple_repeat	1	31	(0)	2848652
2156	12.4	0.0	0.3	chr4	38926458	38926755	(151287800)	C	AluSz	SINE/Alu	(15)	297	1	2848653
709	29.9	6.3	1.3	chr4	47354438	47354739	(142859816)	C	HAL1	LINE/L1	(560)	1947	1630	2862121
43	0.0	0.0	0.0	chr4	47354904	47354942	(142859613)	+	(CCTG)n	Simple_repeat	1	39	(0)	2862124
2046	12.8	2.0	0.3	chr4	47354961	47355280	(142859275)	C	AluSx1	SINE/Alu	(0)	312	1	2862125
2221	18.9	3.5	2.6	chr4	48947350	48947759	(141266796)	+	MER65C	LTR/ERV1	47	461	(0)	2864688
863	17.6	1.2	0.2	chr4	49090455	49091234	(141123321)	+	ALR/Alpha	Satellite/centr	1	788	(0)	2864886
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
14	13.7	0.0	5.6	chr4	49289254	49289289	(140925266)	+	(TTTTGC)n	Simple_repeat	1	36	(0)	2865068
1804	12.9	6.2	0.0	chr4	49289292	49289578	(140924977)	C	L1PA10	LINE/L1	(0)	6168	5863	2865069
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
566	19.1	0.8	0.8	chr4	56584757	56584883	(133629672)	C	MLT2F	LTR/ERVL	(0)	663	537	2872878
2851	21.3	8.8	3.4	chr4	56584889	56585345	(133629210)	C	ERVL-E-int	LTR/ERVL	(4859)	808	349	2872879
143	4.8	1.7	0.6	chr4	62830012	62830186	(127384369)	+	(TTTC)n	Simple_repeat	1	178	(0)	2881283
6876	23.3	6.4	5.2	chr4	62830187	62830224	(127384331)	C	L1MD2	LINE/L1	(1975)	4171	4163	2881281
63	3.2	0.0	0.0	chr4	62830225	62830289	(127384266)	+	(CCTT)n	Simple_repeat	1	65	(0)	2881284
34	3.0	0.0	0.0	chr4	62830292	62830325	(127384230)	+	(TC)n	Simple_repeat	1	34	(0)	2881285
6876	23.3	6.4	5.2	chr4	62830326	62831537	(127383018)	C	L1MD2	LINE/L1	(1984)	4162	2960	2881281
2910	15.8	6.3	4.3	chr4	64305439	64306047	(125908508)	+	LTR77	LTR/ERV1	1	622	(0)	2883005
4385	30.3	9.8	6.6	chr4	65062292	65065243	(125149312)	C	ERV3-16A3_I-int	LTR/ERVL	(419)	4807	1751	2883922
1317	20.5	7.8	3.9	chr4	66164585	66165096	(124049459)	C	MER61F	LTR/ERV1	(23)	653	1	2885295
512	16.5	0.0	1.9	chr4	66165107	66165211	(124049344)	C	L1MA10	LINE/L1	(100)	6089	5987	2885294
1196	29.6	6.0	3.7	chr4	66165244	66165700	(124048855)	C	LTR16B1	LTR/ERVL	(0)	480	13	2885296
24	14.1	0.0	0.0	chr4	69760661	69760699	(120453856)	+	(AC)n	Simple_repeat	1	39	(0)	2889733
2386	10.8	0.7	0.0	chr4	70693490	70693785	(119520770)	+	AluSg	SINE/Alu	1	298	(12)	2890994
1865	15.5	6.4	0.0	chr4	70693886	70694163	(119520392)	+	AluSz	SINE/Alu	1	297	(15)	2890995
24	12.2	0.0	0.0	chr4	74934990	74935025	(115279530)	+	(T)n	Simple_repeat	1	36	(0)	2896886
2482	8.3	0.3	0.0	chr4	75716503	75716814	(114497741)	C	AluSp	SINE/Alu	(0)	313	1	2897931
14	14.5	5.1	0.0	chr4	75716815	75716827	(114497728)	+	(TTCTTG)n	Simple_repeat	4	16	(0)	2897932
1411	15.0	3.1	1.8	chr4	75717161	75717386	(114497169)	+	AluJb	SINE/Alu	1	229	(83)	2897933
19	15.8	0.0	0.0	chr4	77133701	77133737	(113080818)	+	(TGCC)n	Simple_repeat	1	37	(0)	2900423
191	29.2	5.9	0.0	chr4	77133783	77133830	(113080725)	+	L3b	LINE/CR1	5125	5175	(57)	2900424
268	25.9	4.5	3.4	chr4	77134003	77134090	(113080465)	+	MLT1O	LTR/ERVL-MaLR	110	198	(344)	2900425
228	32.6	17.5	5.4	chr4	78862173	78862581	(111351974)	C	L2c	LINE/L2	(8)	3379	2911	2902872
357	24.9	14.2	0.6	chr4	78862677	78862846	(111351709)	+	Chap1_Mam	DNA/hAT-Charlie	49	245	(97)	2902873
19	30.4	3.9	1.9	chr4	82900921	82901024	(107313531)	+	(GCGTG)n	Simple_repeat	1	108	(0)	2908437
51	7.2	0.0	0.0	chr4	84635575	84635625	(105578930)	+	(CTGC)n	Simple_repeat	1	51	(0)	2911397
79	1.4	0.0	0.0	chr4	84635626	84635699	(105578856)	+	(CCTT)n	Simple_repeat	1	74	(0)	2911398
51	7.2	0.0	0.0	chr4	84635700	84635721	(105578834)	+	(CTGC)n	Simple_repeat	4	25	(0)	2911399
1980	17.6	0.0	0.3	chr4	84635749	84636054	(105578501)	C	AluJb	SINE/Alu	(5)	307	3	2911400
2094	20.6	1.9	2.6	chr4	85077100	85077563	(105136992)	C	MER65C	LTR/ERV1	(0)	461	1	2912081
317	24.0	7.7	3.0	chr4	85077564	85077588	(105136967)	+	MIR	SINE/MIR	234	261	(1)	2912080
542	27.8	8.5	1.2	chr4	85077724	85077887	(105136668)	C	LTR33B	LTR/ERVL	(326)	177	1	2912082
249	26.1	19.0	1.7	chr4	101956192	101956308	(88258247)	+	L3	LINE/CR1	3957	4098	(1)	2935014
217	29.6	6.7	8.1	chr4	101956846	101956981	(88257574)	C	MIR3	SINE/MIR	(62)	146	13	2935015
421	20.9	6.5	2.5	chr4	102879367	102879484	(87335071)	+	L1ME2	LINE/L1	5996	6118	(46)	2936299
2184	10.7	3.6	0.0	chr4	102879501	102879790	(87334765)	+	AluSx1	SINE/Alu	1	301	(11)	2936300
245	24.2	6.1	0.0	chr4	102879854	102879915	(87334640)	C	L2b	LINE/L2	(38)	3337	3272	2936301
2231	11.9	0.0	0.6	chr4	102879932	102880243	(87334312)	C	AluSz	SINE/Alu	(2)	310	1	2936302
2399	11.1	2.5	0.3	chr4	106339277	106339628	(83874927)	+	THE1B	LTR/ERVL-MaLR	1	360	(4)	2940684
525	22.4	15.3	2.1	chr4	111773878	111774064	(78440491)	C	Eulor6E	DNA?	(76)	216	1	2948230
4032	10.2	2.2	0.5	chr4	112061852	112062511	(78152044)	+	L1M1	LINE/L1	2828	3499	(4066)	2948633
22	16.4	0.0	0.0	chr4	112062512	112062553	(78152002)	+	GA-rich	Low_complexity	1	42	(0)	2948634
61	1.7	0.0	0.0	chr4	112062554	112062612	(78151943)	+	(AGGC)n	Simple_repeat	1	59	(0)	2948635
3899	12.2	2.5	3.7	chr4	112062614	112063368	(78151187)	+	L1M1	LINE/L1	4518	5263	(2302)	2948633
70	0.0	0.0	0.0	chr4	125828080	125828141	(64386414)	+	(GGAA)n	Simple_repeat	1	62	(0)	2967132
50	3.2	0.0	0.0	chr4	125828142	125828204	(64386351)	+	(CAGG)n	Simple_repeat	1	63	(0)	2967133
388	32.8	2.9	0.0	chr4	125828211	125828344	(64386211)	C	LTR16C	LTR/ERVL	(347)	142	5	2967134
1392	29.4	4.5	0.7	chr4	125828348	125828772	(64385783)	+	MER70A	LTR/ERVL	4	445	(27)	2967135
3775	10.7	0.8	2.8	chr4	128685896	128686432	(61528123)	C	MER61E	LTR/ERV1	(43)	526	1	2971120
642	9.3	0.0	0.0	chr4	128686433	128686518	(61528037)	C	MER50	LTR/ERV1	(524)	210	125	2971118
1189	10.6	1.8	0.0	chr4	128686519	128686679	(61527876)	C	AluSx	SINE/Alu	(83)	229	66	2971121
2133	13.4	0.3	1.0	chr4	128787145	128787457	(61427098)	+	AluSq2	SINE/Alu	1	311	(2)	2971361
2141	18.4	1.1	9.9	chr4	129969422	129969865	(60244690)	C	MER65C	LTR/ERV1	(0)	461	53	2972825
2085	13.2	0.0	2.3	chr4	129969866	129970167	(60244388)	C	AluSz	SINE/Alu	(17)	295	1	2972826
87	0.0	0.0	0.0	chr4	130534950	130535026	(59679529)	+	(GGAA)n	Simple_repeat	1	77	(0)	2973516
23	0.0	0.0	0.0	chr4	130535027	130535055	(59679500)	+	(CAGG)n	Simple_repeat	1	29	(0)	2973517
1439	24.0	10.9	2.7	chr4	131061197	131061651	(59152904)	C	LTR27D	LTR/ERV1	(63)	781	207	2974160
239	23.8	12.5	0.0	chr4	131061631	131061693	(59152862)	C	MER51A	LTR/ERV1	(355)	279	208	2974161
239	30.1	0.0	1.2	chr4	131061686	131061769	(59152786)	C	LTR28C	LTR/ERV1	(904)	225	143	2974162
438	17.9	1.2	0.0	chr4	131061893	131061976	(59152579)	C	MER61E	LTR/ERV1	(484)	85	1	2974163
12	18.1	0.0	3.0	chr4	131062063	131062095	(59152460)	+	(TTTG)n	Simple_repeat	1	33	(0)	2974164
388	26.3	5.1	0.1	chr4	131062155	131062291	(59152264)	+	L1MC5a	LINE/L1	2038	2155	(622)	2974165
1757	22.2	8.4	5.4	chr4	135793645	135794316	(54420239)	C	LTR27D	LTR/ERV1	(982)	773	1	2979689
2669	18.1	3.2	0.0	chr4	135794387	135794844	(54419711)	C	MER1A	DNA/hAT-Charlie	(0)	529	57	2979690
2302	14.3	7.2	1.2	chr4	137179073	137179503	(53035052)	+	MER65C	LTR/ERV1	3	461	(0)	2981371
557	15.4	2.1	2.8	chr4	137463336	137463437	(52751118)	+	MER41C	LTR/ERV1	3	105	(529)	2981713
1362	23.1	4.9	3.1	chr4	137463438	137464126	(52750429)	+	MER61E	LTR/ERV1	1	779	(0)	2981714
501	20.6	4.3	1.7	chr4	137661801	137661935	(52552620)	+	LTR27D	LTR/ERV1	1	143	(451)	2981939
266	21.1	0.0	0.0	chr4	137662007	137662058	(52552497)	+	LTR27D	LTR/ERV1	172	223	(544)	2981939
231	21.9	12.3	0.0	chr4	137662053	137662116	(52552439)	+	MER51A	LTR/ERV1	208	280	(354)	2981940
1109	22.7	8.6	3.5	chr4	137662088	137662537	(52552018)	+	LTR27D	LTR/ERV1	162	787	(57)	2981939
2090	12.5	1.0	0.3	chr4	139941853	139942148	(50272407)	+	AluSq	SINE/Alu	2	299	(14)	2985477
13	9.3	0.0	0.0	chr4	139942149	139942171	(50272384)	+	(GGAG)n	Simple_repeat	1	23	(0)	2985478
42	0.0	0.0	0.0	chr4	139942172	139942210	(50272345)	+	(AGGCAGGC)n	Simple_repeat	1	39	(0)	2985479
1758	10.3	0.0	0.0	chr4	143044867	143045090	(47169465)	+	AluSx	SINE/Alu	81	304	(8)	2989721
17	12.5	0.0	0.0	chr4	146472429	146472454	(43742101)	+	(T)n	Simple_repeat	1	26	(0)	2994396
8229	4.2	1.1	21.9	chr4	151254344	151256013	(38958542)	C	SVA_C	Retroposon/SVA	(23)	1361	47	3001142
40	0.0	0.0	0.0	chr4	151256014	151256050	(38958505)	+	(GGGAGA)n	Simple_repeat	1	37	(0)	3001144
457	29.2	11.6	7.6	chr4	153303904	153304102	(36910453)	C	L2c	LINE/L2	(24)	3363	3140	3004408
2353	12.2	0.0	0.0	chr4	153304103	153304413	(36910142)	C	AluSz6	SINE/Alu	(1)	311	1	3004409
14	28.1	0.0	0.0	chr4	154606606	154606652	(35607903)	+	(TTTATTT)n	Simple_repeat	1	47	(0)	3006289
1030	10.4	1.3	0.0	chr4	155978965	155979118	(34235437)	+	MER61E	LTR/ERV1	1	156	(413)	3008185
4878	8.6	0.3	0.0	chr4	155979131	155979817	(34234738)	C	L1PB	LINE/L1	(3226)	2920	2232	3008186
322	29.9	2.2	0.0	chr4	160670693	160670779	(29543776)	+	MER63D	DNA/hAT-Blackjack	1	89	(972)	3014358
306	34.0	3.8	2.5	chr4	160670829	160670985	(29543570)	+	MER68	LTR/ERVL	405	563	(0)	3014359
31	31.0	2.8	0.0	chr4	160670996	160671023	(29543532)	+	(TC)n	Simple_repeat	1	28	(0)	3014360
60	0.0	0.0	0.0	chr4	160671024	160671077	(29543478)	+	(CTGC)n	Simple_repeat	1	54	(0)	3014361
31	31.0	2.8	0.0	chr4	160671078	160671170	(29543385)	+	(TC)n	Simple_repeat	2	97	(0)	3014362
1781	16.3	0.3	3.3	chr4	164610736	164611041	(25603514)	+	AluJb	SINE/Alu	1	297	(15)	3019624
24	16.6	0.0	0.0	chr4	165295006	165295052	(24919503)	+	(CCTC)n	Simple_repeat	1	47	(0)	3020869
246	33.3	3.4	1.7	chr4	171080739	171080854	(19133701)	C	MIR3	SINE/MIR	(46)	162	45	3028540
938	20.2	4.9	0.5	chr4	174453466	174453659	(15760896)	+	L1PA16	LINE/L1	5964	6166	(0)	3032981
304	24.2	4.8	4.8	chr4	174454055	174454180	(15760375)	C	MIR	SINE/MIR	(0)	262	137	3032982
1103	11.0	0.0	0.0	chr4	186081148	186081293	(4133262)	+	AluSz6	SINE/Alu	162	307	(5)	3049170
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
2366	19.2	8.3	2.7	chr5	614661	615126	(180923133)	C	L1MDa	LINE/L1	(3250)	3287	2788	3055571
2253	11.2	1.3	0.0	chr5	615127	615429	(180922830)	C	AluSq2	SINE/Alu	(4)	309	3	3055575
2366	24.0	8.0	1.8	chr5	615430	616599	(180921660)	C	L1MDa	LINE/L1	(3750)	2787	1011	3055571
3544	13.3	2.6	0.2	chr5	19400792	19401346	(162136913)	C	MER61E	LTR/ERV1	(0)	569	1	3079326
231	20.8	1.9	0.0	chr5	19401352	19401404	(162136855)	+	L1M5	LINE/L1	3191	3244	(2902)	3079324
1085	21.6	1.3	0.5	chr5	20959561	20959783	(160578476)	C	MER65C	LTR/ERV1	(236)	225	1	3081333
12	16.6	2.8	2.7	chr5	20959942	20959977	(160578282)	+	(AATATA)n	Simple_repeat	1	37	(0)	3081336
5695	19.4	4.3	0.3	chr5	26040747	26041885	(155496374)	+	L1M2a1	LINE/L1	1	1186	(5930)	3088103
1849	17.2	15.1	6.5	chr5	34544020	34544413	(146993846)	C	LTR49	LTR/ERV1	(137)	458	1	3099966
475	10.0	0.0	1.4	chr5	34544485	34544555	(146993704)	+	LTR26B	LTR/ERV1	1	70	(461)	3099968
3828	11.6	2.1	2.3	chr5	34544556	34545121	(146993138)	+	MER61E	LTR/ERV1	1	565	(4)	3099969
419	24.8	14.2	3.8	chr5	36506986	36507455	(145030804)	+	L1MEd	LINE/L1	1554	2080	(5023)	3102919
329	27.0	2.6	1.9	chr5	36507777	36507931	(145030328)	+	L1MEd	LINE/L1	3031	3186	(2960)	3102919
255	33.6	6.5	2.7	chr5	44478865	44479084	(137059175)	C	ERV24B_Prim-int	LTR/ERV1	(6999)	1271	1043	3114315
3997	9.7	1.8	0.5	chr5	44479161	44479718	(137058541)	+	MER61E	LTR/ERV1	1	565	(4)	3114316
1166	18.8	0.0	1.8	chr5	52450214	52450436	(129087823)	+	AluJr4	SINE/Alu	86	304	(8)	3119010
2001	23.5	5.5	7.5	chr5	54172035	54172794	(127365465)	+	L1MC4	LINE/L1	7299	8042	(0)	3121317
663	28.6	1.2	0.0	chr5	54294202	54294362	(127243897)	+	MER58A	DNA/hAT-Charlie	1	163	(61)	3121503
183	26.7	0.0	0.0	chr5	54294437	54294481	(127243778)	+	L2a	LINE/L2	3376	3420	(6)	3121504
13	26.3	0.0	5.5	chr5	54518246	54518300	(127019959)	+	(GCC)n	Simple_repeat	1	55	(0)	3121857
1508	19.5	11.4	7.6	chr5	55535461	55535905	(126002354)	+	MER31B	LTR/ERV1	3	466	(0)	3123398
730	35.8	13.7	4.5	chr5	56990082	56991780	(124546479)	+	L2b	LINE/L2	222	2105	(1314)	3125870
7777	11.2	1.8	2.1	chr5	59308629	59309778	(122228481)	C	L1PB1	LINE/L1	(5459)	1403	258	3129342
1543	27.5	6.0	2.1	chr5	59309872	59310353	(122227906)	+	MER50-int	LTR/ERV1	2	503	(6702)	3129341
19	21.5	2.0	0.0	chr5	61390080	61390128	(120148131)	+	(CTGC)n	Simple_repeat	1	50	(0)	3132203
31	0.0	0.0	0.0	chr5	61946195	61946223	(119592036)	+	(CTGC)n	Simple_repeat	1	29	(0)	3132999
1529	16.4	3.8	3.8	chr5	62428672	62428964	(119109295)	C	AluJo	SINE/Alu	(19)	293	1	3133771
2863	17.1	5.6	7.7	chr5	62429014	62429424	(119108835)	C	L1MB8	LINE/L1	(9)	6169	5779	3133772
1801	18.1	5.2	12.5	chr5	63047398	63047902	(118490357)	+	MER45B	DNA/hAT-Tip100	567	1032	(8)	3134680
32	10.3	0.0	1.9	chr5	63048012	63048039	(118490220)	+	(GCCT)n	Simple_repeat	1	28	(0)	3134681
45	0.0	0.0	0.0	chr5	63048040	63048080	(118490179)	+	(TCCC)n	Simple_repeat	1	41	(0)	3134682
32	10.3	0.0	1.9	chr5	63048081	63048105	(118490154)	+	(GCCT)n	Simple_repeat	1	25	(0)	3134683
2243	14.2	4.2	3.3	chr5	65510358	65510494	(116027765)	+	MSTC	LTR/ERVL-MaLR	1	131	(297)	3137948
2454	9.4	0.0	0.3	chr5	65510495	65510803	(116027456)	+	AluSq	SINE/Alu	3	310	(3)	3137949
988	24.9	16.9	0.9	chr5	67047168	67047720	(114490539)	+	L2a	LINE/L2	2765	3426	(0)	3140303
685	15.9	9.6	0.0	chr5	68086052	68086164	(113452095)	+	AluJr	SINE/Alu	1	125	(187)	3141696
12	16.6	0.0	0.0	chr5	68086259	68086285	(113451974)	+	(TTTA)n	Simple_repeat	1	27	(0)	3141697
13	15.4	5.6	0.0	chr5	68215681	68215716	(113322543)	+	G-rich	Low_complexity	1	38	(0)	3141939
334	27.8	12.2	0.0	chr5	68800784	68800927	(112737332)	C	MIRc	SINE/MIR	(7)	261	98	3142743
459	30.5	11.2	1.8	chr5	72382851	72383336	(109154923)	+	L1ME4b	LINE/L1	71	660	(232)	3148905
335	23.3	6.0	2.4	chr5	72383565	72383727	(109154532)	+	L1ME4b	LINE/L1	2259	2387	(34)	3148905
997	27.1	11.9	1.7	chr5	77189387	77190014	(104348245)	C	L2a	LINE/L2	(171)	3255	2562	3156348
195	23.3	0.0	0.0	chr5	77190008	77190050	(104348209)	+	MIR3	SINE/MIR	147	189	(19)	3156350
1790	14.2	2.8	4.9	chr5	79818665	79819126	(101719133)	C	THE1B	LTR/ERVL-MaLR	(0)	428	1	3160410
1487	17.9	0.0	1.3	chr5	80662954	80663177	(100875082)	+	AluJb	SINE/Alu	2	222	(90)	3162001
2763	15.8	0.9	3.6	chr5	80663178	80663485	(100874774)	C	MER65C	LTR/ERV1	(158)	303	1	3161999
11	11.7	7.3	4.5	chr5	87080679	87080719	(94457540)	+	(ATATGT)n	Simple_repeat	1	44	(0)	3170606
403	18.2	4.7	9.3	chr5	91735780	91735934	(89802325)	C	LTR27D	LTR/ERV1	(432)	162	1	3176656
235	39.0	2.0	1.4	chr5	94263440	94263587	(87274672)	+	L2c	LINE/L2	2235	2383	(1036)	3179618
11	24.4	2.6	0.0	chr5	94263636	94263649	(87274610)	+	(CTTTCT)n	Simple_repeat	1	23	(17)	3179619
15	0.0	0.0	0.0	chr5	94263650	94263666	(87274593)	+	(TC)n	Simple_repeat	1	17	(0)	3179620
11	24.4	2.6	0.0	chr5	94263667	94263674	(87274585)	+	(CTTTCT)n	Simple_repeat	24	40	(0)	3179619
1656	12.2	0.9	1.0	chr5	99768838	99769165	(81769094)	+	L1PREC2	LINE/L1	5076	5396	(750)	3186884
3743	14.1	1.1	2.4	chr5	99769175	99769798	(81768461)	+	LTR77	LTR/ERV1	1	616	(6)	3186885
433	32.1	19.9	0.7	chr5	102288228	102289023	(79249236)	+	L2a	LINE/L2	2420	3423	(3)	3189939
213	31.4	10.1	0.8	chr5	102756007	102756131	(78782128)	+	MIRc	SINE/MIR	58	195	(73)	3190518
1037	30.9	7.0	1.7	chr5	102780292	102780709	(78757550)	C	MER20B	DNA/hAT-Charlie	(341)	442	1	3190556
1156	15.9	3.3	2.4	chr5	102780720	102780741	(78757518)	C	MER20	DNA/hAT-Charlie	(3)	216	196	3190562
111	1.6	1.5	3.0	chr5	102780742	102780872	(78757387)	+	(TTTC)n	Simple_repeat	1	133	(0)	3190563
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
243	30.0	7.7	0.8	chr5	107682696	107682816	(73855443)	+	MamRep605	LTR?	15	144	(705)	3196645
234	27.1	9.9	0.0	chr5	107683004	107683121	(73855138)	+	MamRep605	LTR?	380	510	(339)	3196645
20	14.6	0.0	0.0	chr5	107683123	107683160	(73855099)	+	(ATTC)n	Simple_repeat	1	38	(0)	3196646
2264	7.8	0.0	0.0	chr5	108531115	108531423	(73006836)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1272	3197774
1042	25.0	4.2	3.2	chr5	108531424	108532124	(73006135)	+	MER61E	LTR/ERV1	1	728	(0)	3197775
391	25.0	2.4	9.8	chr5	112707148	112707280	(68830979)	+	L2c	LINE/L2	3264	3386	(1)	3203152
4012	11.1	1.4	0.2	chr5	113674936	113675493	(67862766)	C	MER61E	LTR/ERV1	(4)	565	1	3204614
2496	23.0	6.2	9.8	chr5	113675494	113676171	(67862088)	+	Charlie17b	DNA/hAT-Charlie	573	1204	(0)	3204613
301	32.5	11.7	6.5	chr5	115032559	115032759	(66505500)	+	L3	LINE/CR1	3422	3634	(465)	3206223
3147	13.6	5.2	1.4	chr5	115032779	115033276	(66504983)	+	MER61E	LTR/ERV1	1	518	(51)	3206224
2160	14.0	3.6	2.5	chr5	115561550	115561909	(65976350)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	3206972
27	0.0	0.0	0.0	chr5	117680034	117680059	(63858200)	+	(CTGC)n	Simple_repeat	1	26	(0)	3209911
2284	10.4	2.6	0.0	chr5	117680063	117680360	(63857899)	C	AluSg	SINE/Alu	(4)	306	1	3209912
1505	24.6	8.6	2.5	chr5	122766225	122766704	(58771555)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	1	3216399
617	20.6	2.8	2.8	chr5	122766808	122766952	(58771307)	C	Charlie8	DNA/hAT-Charlie	(2283)	145	1	3216400
22	10.4	0.0	0.0	chr5	125202724	125202754	(56335505)	+	(A)n	Simple_repeat	1	31	(0)	3219751
523	25.0	0.8	1.6	chr5	125202804	125202925	(56335334)	C	MER45A	DNA/hAT-Tip100	(0)	178	58	3219752
450	36.0	10.9	3.1	chr5	125202945	125203420	(56334839)	+	L2a	LINE/L2	2898	3412	(14)	3219753
448	33.7	2.9	1.5	chr5	125414812	125415013	(56123246)	C	MER102c	DNA/hAT-Charlie	(16)	315	111	3220032
303	18.2	1.8	0.0	chr5	125415039	125415093	(56123166)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	335	3220033
1944	14.8	6.2	2.1	chr5	125415094	125415418	(56122841)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	3220034
2003	12.8	4.7	0.6	chr5	125415419	125415746	(56122513)	C	MLT1B	LTR/ERVL-MaLR	(48)	342	1	3220033
256	36.5	2.2	0.9	chr5	127670950	127671062	(53867197)	+	MIR3	SINE/MIR	52	162	(100)	3223148
14915	15.5	1.2	1.1	chr5	129267138	129267518	(52270741)	C	L1M1	LINE/L1	(3682)	3883	3505	3225139
35	2.4	2.2	2.2	chr5	129267519	129267563	(52270696)	+	(TGCC)n	Simple_repeat	1	46	(0)	3225140
14915	15.2	2.6	2.0	chr5	129267564	129270040	(52268219)	C	L1M1	LINE/L1	(4061)	3504	1011	3225139
20	19.5	3.3	1.6	chr5	129904392	129904451	(51633808)	+	GA-rich	Low_complexity	1	62	(0)	3225895
30	20.4	2.4	2.4	chr5	129904499	129904580	(51633679)	+	(GCC)n	Simple_repeat	1	84	(0)	3225896
1052	25.1	3.9	1.5	chr5	130313198	130313546	(51224713)	C	LTR25	LTR/ERV1	(25)	819	468	3226415
289	23.1	0.0	0.0	chr5	130313576	130313640	(51224619)	C	LTR27C	LTR/ERV1	(544)	223	159	3226416
512	15.5	4.0	0.0	chr5	130313751	130313857	(51224402)	C	MER61E	LTR/ERV1	(905)	115	1	3226417
527	25.8	1.6	0.0	chr5	130313870	130313993	(51224266)	C	L1MEc	LINE/L1	(6166)	234	109	3226407
904	28.8	11.4	5.4	chr5	130314049	130315123	(51223136)	C	L1MEg	LINE/L1	(4914)	1170	31	3226418
36024	12.3	3.3	1.0	chr5	132283296	132285518	(49252741)	C	LTR57-int	LTR/ERVL	(1434)	3909	1694	3229139
325	19.4	1.4	1.4	chr5	133381931	133382003	(48156256)	+	MLT1I	LTR/ERVL-MaLR	88	160	(251)	3230898
350	27.4	8.1	0.9	chr5	133382264	133382377	(48155882)	+	MLT1I	LTR/ERVL-MaLR	281	403	(8)	3230898
16	6.9	6.5	0.0	chr5	135190648	135190678	(46347581)	+	(TTTGG)n	Simple_repeat	1	33	(0)	3234004
594	33.9	17.0	2.8	chr5	135562192	135562859	(45975400)	+	L3	LINE/CR1	3248	4029	(70)	3234476
232	30.7	18.5	1.2	chr5	138482603	138483011	(43055248)	C	L2c	LINE/L2	(4)	3383	2873	3238949
3635	11.1	1.4	8.8	chr5	139232118	139232581	(42305678)	C	MER61E	LTR/ERV1	(156)	413	1	3240351
545	15.6	2.0	12.0	chr5	139232582	139232668	(42305591)	+	FLAM_C	SINE/Alu	55	133	(0)	3240350
2402	7.7	0.0	1.0	chr5	139232671	139232969	(42305290)	+	AluY	SINE/Alu	1	296	(15)	3240354
14	28.5	3.1	1.5	chr5	142108653	142108717	(39429542)	+	G-rich	Low_complexity	1	67	(0)	3245269
13	4.7	0.0	4.2	chr5	142108931	142108954	(39429305)	+	(GCTC)n	Simple_repeat	1	24	(0)	3245270
528	27.7	10.2	3.9	chr5	142279616	142280024	(39258235)	C	L2c	LINE/L2	(1)	3425	2912	3245625
522	24.8	1.7	0.0	chr5	142280077	142280189	(39258070)	C	MIR	SINE/MIR	(72)	190	76	3245626
306	26.7	9.2	8.8	chr5	143811595	143811832	(37726427)	C	L2a	LINE/L2	(1)	3425	3187	3248297
480	29.9	4.0	3.0	chr5	143811835	143812034	(37726225)	C	L2a	LINE/L2	(568)	2851	2650	3248297
587	32.8	11.0	4.2	chr5	149688493	149689008	(31849251)	C	L2b	LINE/L2	(17)	3358	2792	3258308
1989	24.5	5.7	2.5	chr5	149689009	149689532	(31848727)	+	L1ME3A	LINE/L1	5600	6141	(32)	3258309
129	11.5	4.0	1.9	chr5	150436990	150437231	(31101028)	+	GA-rich	Low_complexity	8	255	(0)	3259935
37	0.0	0.0	0.0	chr5	150437248	150437281	(31100978)	+	(AGGC)n	Simple_repeat	1	34	(0)	3259936
420	9.8	22.7	2.1	chr5	150437282	150437375	(31100884)	+	MER5A	DNA/hAT-Charlie	71	189	(0)	3259937
555	18.9	20.7	1.2	chr5	150830282	150830535	(30707724)	+	L1MB4	LINE/L1	2625	2928	(3813)	3260759
3414	20.0	4.5	2.2	chr5	150830533	150831506	(30706753)	+	L1MB4	LINE/L1	3107	4104	(2643)	3260759
2129	11.6	0.0	0.0	chr5	151235395	151235670	(30302589)	+	AluSg4	SINE/Alu	1	276	(34)	3261462
30	0.0	0.0	0.0	chr5	151235683	151235710	(30302549)	+	(AGGC)n	Simple_repeat	1	28	(0)	3261463
315	31.3	3.3	3.3	chr5	151235716	151235867	(30302392)	+	L3	LINE/CR1	3916	4067	(32)	3261464
17	0.0	4.2	0.0	chr5	151686871	151686894	(29851365)	+	(GGCA)n	Simple_repeat	1	25	(0)	3262394
20	17.9	1.6	6.2	chr5	151686990	151687053	(29851206)	+	(CTC)n	Simple_repeat	1	65	(0)	3262395
283	32.7	10.3	0.6	chr5	151687170	151687326	(29850933)	C	MIR3	SINE/MIR	(8)	200	27	3262396
4100	13.3	4.9	0.6	chr5	152807585	152808250	(28730009)	C	MER50B	LTR/ERV1	(1)	696	1	3264251
904	30.1	9.5	0.9	chr5	154039154	154039664	(27498595)	C	L2b	LINE/L2	(5)	3370	2791	3266299
4097	13.8	2.6	0.8	chr5	157918633	157919281	(23618978)	C	MER50	LTR/ERV1	(73)	661	1	3273603
3769	6.5	0.2	0.0	chr5	157919381	157919842	(23618417)	C	LTR2	LTR/ERV1	(0)	463	1	3273604
15	24.9	5.9	1.4	chr5	160287744	160287811	(21250448)	+	(AGGC)n	Simple_repeat	1	72	(0)	3277852
33	0.0	0.0	0.0	chr5	164296655	164296685	(17241574)	+	(CTGC)n	Simple_repeat	1	31	(0)	3283801
208	29.5	12.7	5.7	chr5	169013739	169013950	(12524309)	+	L2c	LINE/L2	3096	3324	(63)	3291104
33	0.0	0.0	0.0	chr5	169014097	169014127	(12524132)	+	(AGGC)n	Simple_repeat	1	31	(0)	3291105
14	9.6	10.4	3.8	chr5	171419420	171419467	(10118792)	+	(AGGC)n	Simple_repeat	1	53	(0)	3295243
15	24.0	2.0	1.9	chr5	171419565	171419615	(10118644)	+	(CCGGCC)n	Simple_repeat	1	52	(0)	3295244
1884	23.7	5.2	8.1	chr5	172875869	172876562	(8661697)	C	L1MC5a	LINE/L1	(467)	2310	1638	3298407
346	33.6	3.6	3.7	chr5	174355259	174355484	(7182775)	C	MIRb	SINE/MIR	(30)	238	13	3301343
355	37.1	7.0	2.7	chr5	175690280	175690498	(5847761)	+	MIRb	SINE/MIR	34	262	(6)	3303934
21	6.9	0.0	0.0	chr5	175690530	175690560	(5847699)	+	(CCTG)n	Simple_repeat	1	31	(0)	3303935
1036	23.3	5.3	4.4	chr5	175690581	175690899	(5847360)	C	L1MB8	LINE/L1	(2)	6176	5855	3303936
20	29.4	2.1	3.2	chr5	175690912	175691004	(5847255)	+	(TTCC)n	Simple_repeat	1	95	(0)	3303937
329	29.7	9.2	1.7	chr5	176611606	176611725	(4926534)	C	MIRb	SINE/MIR	(29)	239	110	3305656
986	34.5	14.5	2.7	chr5	176611735	176612774	(4925485)	C	L2	LINE/L2	(584)	2835	1652	3305657
517	31.4	12.7	1.6	chr5	176665415	176665802	(4872457)	C	L2a	LINE/L2	(1)	3374	2941	3305762
341	22.9	7.6	3.9	chr5	176837948	176838074	(4700185)	C	L2a	LINE/L2	(0)	3426	3295	3306091
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
595	30.6	10.9	8.6	chr5	178731971	178732563	(2805696)	C	MLT1L	LTR/ERVL-MaLR	(0)	610	3	3309719
2565	4.7	0.0	0.0	chr5	180493737	180494032	(1044227)	+	AluYk2	SINE/Alu	2	297	(14)	3312777
20	31.7	0.0	3.3	chr5	180494108	180494198	(1044061)	+	GA-rich	Low_complexity	1	91	(0)	3312778
208	19.8	16.5	4.7	chr6	1138771	1138855	(169667124)	+	L2c	LINE/L2	3290	3386	(1)	3315692
5302	20.9	10.8	0.9	chr6	1139029	1140940	(169665039)	+	L1MEc	LINE/L1	765	2871	(3448)	3315693
221	31.3	6.6	7.2	chr6	3240654	3240791	(167565188)	+	MIRc	SINE/MIR	69	205	(63)	3318625
429	29.8	9.3	7.5	chr6	3355843	3356096	(167449883)	+	L1ME3E	LINE/L1	5837	6095	(147)	3318774
587	33.3	3.3	3.6	chr6	5895377	5895712	(164910267)	+	MLT1I	LTR/ERVL-MaLR	64	398	(13)	3322716
556	28.4	10.9	4.8	chr6	7968965	7969256	(162836723)	+	L2a	LINE/L2	3114	3425	(1)	3325969
18	23.0	0.0	0.0	chr6	7969336	7969372	(162836607)	+	A-rich	Low_complexity	1	37	(0)	3325970
252	30.6	2.3	0.0	chr6	11830380	11830464	(158975515)	C	L2a	LINE/L2	(18)	3408	3322	3331791
645	24.9	1.2	1.2	chr6	12529467	12529637	(158276342)	C	MER5A	DNA/hAT-Charlie	(0)	189	19	3332827
36	0.0	0.0	0.0	chr6	13733544	13733574	(157072405)	+	(AC)n	Simple_repeat	1	31	(0)	3334781
22	0.0	0.0	0.0	chr6	13733729	13733752	(157072227)	+	(T)n	Simple_repeat	1	24	(0)	3334782
9544	11.5	1.7	11.6	chr6	16196900	16198653	(154607326)	C	LTR12C	LTR/ERV1	(0)	1579	3	3339137
17	15.5	0.0	7.1	chr6	16322723	16322764	(154483215)	+	(TC)n	Simple_repeat	1	42	(0)	3339338
31	0.0	0.0	0.0	chr6	17102344	17102372	(153703607)	+	(AAAC)n	Simple_repeat	1	29	(0)	3340539
2210	22.0	12.5	1.6	chr6	18025093	18025697	(152780282)	+	MLT1E1A	LTR/ERVL-MaLR	1	680	(0)	3342280
3354	12.0	0.0	5.8	chr6	18090195	18090715	(152715264)	C	MER61E	LTR/ERV1	(78)	491	1	3342415
276	28.3	15.0	5.0	chr6	18091042	18091364	(152714615)	+	L2c	LINE/L2	3024	3384	(3)	3342417
14	0.0	8.3	0.0	chr6	21954477	21954500	(148851479)	+	(AGGC)n	Simple_repeat	1	26	(0)	3348607
14	22.6	0.0	4.4	chr6	21980486	21980530	(148825449)	+	(CCT)n	Simple_repeat	1	45	(0)	3348661
2734	1.1	0.0	0.0	chr6	23300144	23300456	(147505523)	C	AluY	SINE/Alu	(0)	311	1	3350345
3471	13.8	0.6	1.1	chr6	23300484	23301011	(147504968)	+	MER61E	LTR/ERV1	1	525	(44)	3350346
5449	11.0	3.7	0.6	chr6	28335120	28335915	(142470064)	+	LTR25	LTR/ERV1	1	821	(23)	3358463
15	13.4	3.0	0.0	chr6	28489545	28489577	(142316402)	+	GA-rich	Low_complexity	1	34	(0)	3358714
23	13.0	0.0	0.0	chr6	28489717	28489751	(142316228)	+	(T)n	Simple_repeat	1	35	(0)	3358715
16	21.6	4.2	0.0	chr6	28709587	28709634	(142096345)	+	(TCT)n	Simple_repeat	1	50	(0)	3359063
180	26.7	0.0	3.2	chr6	28709755	28709816	(142096163)	C	MER5A	DNA/hAT-Charlie	(26)	163	104	3359064
4068	20.2	3.6	2.5	chr6	30274795	30276051	(140529928)	+	L1MB7	LINE/L1	5079	6347	(10)	3361359
2397	30.3	5.4	6.6	chr6	30276058	30277473	(140528506)	+	ERV3-16A3_I-int	LTR/ERVL	1059	2455	(2771)	3361369
4612	7.2	0.0	0.0	chr6	31390293	31390861	(139415118)	C	MER61E	LTR/ERV1	(0)	569	1	3363260
333	28.9	6.8	3.8	chr6	31390863	31391020	(139414959)	+	L2b	LINE/L2	3213	3375	(0)	3363255
4638	7.6	0.0	0.0	chr6	31487208	31487776	(139318203)	C	MER61E	LTR/ERV1	(0)	569	1	3363393
373	29.6	6.8	3.8	chr6	31487778	31487935	(139318044)	+	L2b	LINE/L2	3213	3375	(0)	3363389
228	33.0	5.5	5.9	chr6	33246253	33246455	(137559524)	+	MLT1K	LTR/ERVL-MaLR	5	206	(389)	3366067
261	33.3	10.9	0.0	chr6	33246678	33246800	(137559179)	+	MIRb	SINE/MIR	70	207	(61)	3366068
294	29.4	9.9	0.0	chr6	33246791	33246899	(137559080)	+	L2a	LINE/L2	3304	3424	(2)	3366069
16	0.0	0.0	0.0	chr6	34709365	34709382	(136096597)	+	(TA)n	Simple_repeat	1	18	(0)	3368978
12	20.9	6.8	3.2	chr6	36946336	36946394	(133859585)	+	(CTCCT)n	Simple_repeat	1	63	(0)	3373616
12	27.7	4.3	2.8	chr6	36946395	36946403	(133859576)	+	(CCTTCT)n	Simple_repeat	2	72	(0)	3373617
293	27.4	11.4	2.5	chr6	36946464	36946612	(133859367)	+	MIRb	SINE/MIR	61	216	(52)	3373618
2320	8.3	0.7	0.0	chr6	37072324	37072612	(133733367)	+	AluSp	SINE/Alu	1	291	(22)	3373869
51	0.0	0.0	0.0	chr6	37072614	37072659	(133733320)	+	(GGAA)n	Simple_repeat	1	46	(0)	3373870
16	0.0	0.0	0.0	chr6	37072660	37072680	(133733299)	+	(CAGG)n	Simple_repeat	1	21	(0)	3373871
317	19.0	24.2	0.0	chr6	37791691	37791806	(133014173)	+	MIRc	SINE/MIR	19	171	(97)	3375369
13	23.3	0.0	2.4	chr6	39725496	39725537	(131080442)	+	G-rich	Low_complexity	1	42	(0)	3378438
4017	9.4	1.9	3.3	chr6	41189645	41190217	(129615762)	C	MER61E	LTR/ERV1	(4)	565	1	3380759
323	22.3	6.0	7.8	chr6	41190218	41190276	(129615703)	C	MIR3	SINE/MIR	(63)	145	84	3380758
459	24.8	8.3	2.1	chr6	41190478	41190680	(129615299)	C	MIRb	SINE/MIR	(40)	228	7	3380760
13	18.4	5.7	3.6	chr6	41780087	41780139	(129025840)	+	(GCGCGGAG)n	Simple_repeat	1	56	(0)	3381804
12	21.8	2.7	0.0	chr6	41780265	41780301	(129025678)	+	G-rich	Low_complexity	1	38	(0)	3381805
25	22.5	1.8	7.0	chr6	41894989	41895100	(128910879)	+	(GGCCCCC)n	Simple_repeat	1	114	(0)	3382035
14	30.2	3.6	2.3	chr6	41895231	41895314	(128910665)	+	(CCTCCCC)n	Simple_repeat	1	87	(0)	3382036
318	28.8	7.1	3.2	chr6	42314934	42315123	(128490856)	C	L2a	LINE/L2	(257)	3169	2972	3382995
1066	19.2	6.9	0.0	chr6	42315140	42315342	(128490637)	+	MER20	DNA/hAT-Charlie	2	219	(0)	3382999
1870	14.8	3.1	0.0	chr6	43124404	43124680	(127681299)	+	AluJb	SINE/Alu	2	287	(25)	3384747
14	14.9	0.0	3.1	chr6	43507539	43507570	(127298409)	+	(CCT)n	Simple_repeat	1	32	(0)	3385487
190	28.3	20.9	1.9	chr6	43951724	43951831	(126854148)	+	MIRb	SINE/MIR	101	234	(34)	3386310
427	24.6	1.7	7.4	chr6	45472500	45472688	(125333291)	+	UCON31	Unknown	91	268	(186)	3388668
2735	14.3	6.2	1.9	chr6	46112079	46112602	(124693377)	+	LTR49	LTR/ERV1	1	743	(44)	3389700
304	32.1	6.7	9.5	chr6	46112683	46112774	(124693205)	C	L2	LINE/L2	(341)	3078	2999	3389709
2185	12.8	0.3	0.0	chr6	46112775	46113070	(124692909)	+	AluSx1	SINE/Alu	1	297	(15)	3389710
213	33.8	8.2	5.6	chr6	52581291	52581610	(118224369)	C	L2	LINE/L2	(1466)	1953	1625	3398751
320	30.9	31.8	0.0	chr6	52581651	52581845	(118224134)	C	MIRc	SINE/MIR	(3)	265	7	3398754
1702	15.7	6.0	0.8	chr6	52581950	52582244	(118223735)	C	AluSz6	SINE/Alu	(0)	312	1	3398755
1982	13.1	4.1	0.0	chr6	56260302	56260583	(114545396)	+	AluSx	SINE/Alu	1	294	(18)	3403945
28	0.0	0.0	0.0	chr6	56260586	56260611	(114545368)	+	(AAG)n	Simple_repeat	1	26	(0)	3403946
93	8.2	0.0	0.0	chr6	56260626	56260754	(114545225)	+	(AGGA)n	Simple_repeat	1	129	(0)	3403947
47	2.3	0.0	0.0	chr6	56260849	56260893	(114545086)	+	(TG)n	Simple_repeat	1	45	(0)	3403948
17	20.2	2.1	2.1	chr6	72622248	72622294	(98183685)	+	(GCG)n	Simple_repeat	1	48	(0)	3422094
9735	5.0	0.2	8.0	chr6	74254522	74255963	(96550016)	C	SVA_C	Retroposon/SVA	(8)	1376	48	3424783
26	0.0	0.0	0.0	chr6	74255972	74255996	(96549983)	+	(GGGAGA)n	Simple_repeat	1	25	(0)	3424784
2111	10.1	5.9	0.0	chr6	79671185	79671471	(91134508)	+	AluSp	SINE/Alu	1	305	(8)	3431594
376	30.7	0.9	0.0	chr6	79671475	79671588	(91134391)	C	Kanga11a	DNA/TcMar-Tc2	(821)	149	35	3431587
1447	32.6	5.9	2.8	chr6	80843681	80844380	(89961599)	+	L1M2	LINE/L1	866	1583	(5186)	3433081
1691	26.9	8.0	3.7	chr6	80844403	80845875	(89960104)	+	L1M2	LINE/L1	1179	2688	(4161)	3433081
16	0.0	0.0	0.0	chr6	87265090	87265107	(83540872)	+	(TC)n	Simple_repeat	1	18	(0)	3441298
1324	11.2	0.0	1.1	chr6	87265108	87265285	(83540694)	C	AluSc8	SINE/Alu	(7)	304	129	3441299
45	2.2	0.0	0.0	chr6	89242621	89242666	(81563313)	+	(GGAA)n	Simple_repeat	1	46	(0)	3444421
22	3.3	0.0	0.0	chr6	89242667	89242695	(81563284)	+	(AGGC)n	Simple_repeat	3	31	(0)	3444422
1340	28.5	12.1	1.5	chr6	90224086	90224751	(80581228)	C	Charlie15b	DNA/hAT-Charlie	(315)	746	1	3446055
821	28.0	10.1	4.7	chr6	90224998	90225066	(80580913)	C	L2a	LINE/L2	(0)	3426	3349	3446061
35	0.0	0.0	0.0	chr6	90225067	90225098	(80580881)	+	(AAC)n	Simple_repeat	1	32	(0)	3446062
1801	14.3	1.7	3.4	chr6	90225103	90225396	(80580583)	+	AluJb	SINE/Alu	1	289	(23)	3446063
2449	6.7	0.0	0.0	chr6	98620427	98620765	(72185214)	C	AluY	SINE/Alu	(0)	311	1	3456457
17	19.7	0.0	4.0	chr6	98620803	98620854	(72185125)	+	A-rich	Low_complexity	1	49	(0)	3456458
54	0.0	0.0	0.0	chr6	98620855	98620903	(72185076)	+	(GAAG)n	Simple_repeat	1	49	(0)	3456459
20	7.2	0.0	0.0	chr6	98620904	98620933	(72185046)	+	(CAGG)n	Simple_repeat	1	30	(0)	3456460
42	17.6	3.2	1.0	chr6	98621040	98621134	(72184845)	+	(CTCT)n	Simple_repeat	1	98	(0)	3456461
2658	3.9	0.0	1.0	chr6	99515771	99516075	(71289904)	C	AluYm1	SINE/Alu	(8)	303	2	3457765
3038	19.9	3.0	2.2	chr6	103225758	103226718	(67579261)	+	L1MA6	LINE/L1	5014	5990	(310)	3462475
473	13.4	2.4	0.0	chr6	103226719	103226800	(67579179)	+	MER61E	LTR/ERV1	2	85	(484)	3462479
236	31.8	0.0	1.2	chr6	103226926	103227011	(67578968)	+	LTR28C	LTR/ERV1	140	224	(905)	3462480
14	14.6	0.0	3.1	chr6	105403119	105403171	(65402808)	+	(CGG)n	Simple_repeat	1	51	(0)	3465370
16	19.2	0.0	0.0	chr6	107700630	107700659	(63105320)	+	A-rich	Low_complexity	1	30	(0)	3469236
2218	15.3	3.0	1.9	chr6	108128646	108129004	(62676975)	+	THE1B	LTR/ERVL-MaLR	1	363	(1)	3470009
2081	18.4	2.1	0.6	chr6	110395050	110395441	(60410538)	+	MLT2B4	LTR/ERVL	5	445	(111)	3473576
20	25.2	2.1	5.3	chr6	111482653	111482745	(59323234)	+	(GCCGGC)n	Simple_repeat	1	95	(0)	3475664
19	23.4	0.0	0.0	chr6	111482928	111482977	(59323002)	+	(CGGCAG)n	Simple_repeat	1	50	(0)	3475665
848	24.1	17.7	2.9	chr6	111707474	111707785	(59098194)	+	MER113	DNA/hAT-Charlie	114	481	(40)	3476082
378	25.3	2.4	0.0	chr6	112204161	112204243	(58601736)	+	L2a	LINE/L2	3315	3399	(27)	3476765
6417	8.5	2.1	2.7	chr6	112527681	112529221	(58276758)	C	SVA_E	Retroposon/SVA	(20)	1366	1	3477236
832	36.6	3.1	1.4	chr6	113129634	113130134	(57675845)	C	L2c	LINE/L2	(340)	3079	2570	3478011
279	37.9	3.9	4.8	chr6	114195605	114195735	(56610244)	C	L4_B_Mam	LINE/RTE-X	(3841)	1100	965	3479778
3465	9.7	10.5	2.7	chr6	114195736	114196254	(56609725)	+	MER61E	LTR/ERV1	2	565	(4)	3479779
211	39.1	1.1	2.1	chr6	116324386	116324479	(54481500)	+	MIRb	SINE/MIR	3	95	(173)	3482422
13	29.4	0.0	4.9	chr6	116405493	116405553	(54400426)	+	(TTTCCC)n	Simple_repeat	1	61	(0)	3482519
12	19.4	0.0	5.1	chr6	116405792	116405830	(54400149)	+	(GAGGCA)n	Simple_repeat	1	39	(0)	3482520
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
22	22.7	0.0	0.0	chr6	119721655	119721700	(51084279)	+	(T)n	Simple_repeat	1	46	(0)	3486941
22369	10.7	2.7	2.0	chr6	119721712	119728346	(51077633)	C	L1PB3	LINE/L1	(32)	6838	251	3486942
3092	27.9	7.4	4.1	chr6	121663980	121665097	(49140882)	C	L2a	LINE/L2	(176)	3250	2105	3489407
1023	11.9	15.7	5.8	chr6	121665098	121665303	(49140676)	+	MER30	DNA/hAT-Charlie	1	230	(0)	3489411
3092	27.2	8.7	3.1	chr6	121665304	121665506	(49140473)	C	L2a	LINE/L2	(1315)	2104	1880	3489407
243	30.1	17.9	1.5	chr6	121665502	121665636	(49140343)	C	MIR	SINE/MIR	(97)	165	4	3489412
1605	20.8	11.1	4.7	chr6	122170708	122171262	(48634717)	+	L1MB7	LINE/L1	2938	3532	(2614)	3490066
2240	22.7	6.1	4.0	chr6	122171272	122171849	(48634130)	+	LTR75B	LTR/ERVL	4	594	(14)	3490067
7082	14.2	1.8	1.6	chr6	125158758	125159835	(45646144)	C	Tigger1	DNA/TcMar-Tigger	(0)	2418	1339	3493939
2412	9.9	5.8	0.3	chr6	125159836	125160179	(45645800)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3493940
7082	14.2	1.8	1.6	chr6	125160180	125160351	(45645628)	C	Tigger1	DNA/TcMar-Tigger	(1080)	1338	1166	3493939
275	34.2	2.5	1.7	chr6	125700094	125700212	(45105767)	C	MIR	SINE/MIR	(24)	238	119	3494699
1700	17.9	5.2	0.3	chr6	125858359	125858648	(44947331)	+	AluJr	SINE/Alu	1	305	(7)	3494931
282	34.5	6.1	6.6	chr6	127859136	127859483	(42946496)	+	L2c	LINE/L2	3002	3347	(40)	3497410
1229	18.7	4.5	2.3	chr6	128434748	128434966	(42371013)	+	AluJr	SINE/Alu	2	225	(87)	3498134
115	15.9	0.0	1.0	chr6	128434967	128435174	(42370805)	+	(GCAG)n	Simple_repeat	1	208	(0)	3498135
22659	8.0	1.0	0.6	chr6	132638530	132641306	(38164673)	+	L1PA7	LINE/L1	3680	6466	(3)	3504087
444	16.5	8.5	4.6	chr6	132876668	132876820	(37929159)	+	MER61E	LTR/ERV1	1	157	(437)	3504483
288	20.3	0.0	0.0	chr6	132876851	132876909	(37929070)	+	MER61E	LTR/ERV1	144	202	(818)	3504483
257	22.2	14.9	0.0	chr6	132876915	132876977	(37929002)	+	MER51A	LTR/ERV1	208	281	(353)	3504484
242	25.4	0.0	0.0	chr6	132876956	132877010	(37928969)	+	MER51A	LTR/ERV1	139	193	(289)	3504484
318	35.6	3.7	0.8	chr6	134595236	134595365	(36210614)	C	MER91A	DNA/hAT-Tip100	(60)	136	3	3507156
190	32.3	1.5	0.0	chr6	135847079	135847143	(34958836)	+	L2a	LINE/L2	2376	2441	(978)	3509024
866	28.3	7.8	2.6	chr6	135847149	135847489	(34958490)	+	L2a	LINE/L2	1302	1661	(1758)	3509025
2449	21.3	2.8	1.7	chr6	135847541	135848065	(34957914)	C	MLT1E2	LTR/ERVL-MaLR	(96)	531	1	3509026
820	20.0	0.6	1.2	chr6	136148219	136148385	(34657594)	+	AluJb	SINE/Alu	147	312	(0)	3509419
25	7.0	6.5	0.0	chr6	136148388	136148430	(34657549)	+	(AAGGA)n	Simple_repeat	1	88	(0)	3509425
22	10.9	2.5	0.0	chr6	136148431	136148470	(34657509)	+	(AGGG)n	Simple_repeat	1	41	(0)	3509426
31	0.0	0.0	0.0	chr6	136148471	136148499	(34657480)	+	(AGGC)n	Simple_repeat	1	29	(0)	3509427
1002	18.4	18.0	3.1	chr6	137218671	137218962	(33587017)	C	Tigger3a	DNA/TcMar-Tigger	(0)	348	4	3511130
225	37.4	3.9	2.8	chr6	138689977	138690152	(32115827)	+	MIR3	SINE/MIR	17	194	(14)	3513355
2230	12.5	0.0	0.7	chr6	143213489	143213816	(27592163)	C	AluSx1	SINE/Alu	(0)	312	1	3519542
102	15.3	1.1	1.1	chr6	146270807	146270994	(24534985)	+	(TTTC)n	Simple_repeat	1	190	(0)	3523832
2200	14.9	0.0	0.0	chr6	146270996	146271303	(24534676)	C	AluSc8	SINE/Alu	(3)	308	1	3523833
33	0.0	0.0	0.0	chr6	148919418	148919445	(21886534)	+	(GT)n	Simple_repeat	1	28	(0)	3527661
6395	14.3	2.6	0.3	chr6	150552735	150553771	(20252208)	C	L1MC1	LINE/L1	(0)	6333	5272	3530407
640	26.4	13.9	0.5	chr6	151141145	151141361	(19664618)	C	MIR	SINE/MIR	(10)	252	2	3531394
286	23.3	7.5	8.5	chr6	151141580	151141673	(19664306)	+	L2c	LINE/L2	3290	3382	(5)	3531395
7866	10.6	3.5	0.6	chr6	151220394	151220408	(19585571)	+	HSMAR1	DNA/TcMar-Mariner	148	162	(1125)	3531603
657	14.8	0.0	6.9	chr6	151220409	151220539	(19585440)	C	L1MB2	LINE/L1	(0)	6171	6050	3531604
17	11.3	0.0	0.0	chr6	151325607	151325635	(19480344)	+	(GTGG)n	Simple_repeat	1	29	(0)	3531798
3468	10.2	13.3	0.2	chr6	151523855	151524345	(19281634)	C	MER61E	LTR/ERV1	(4)	565	1	3532176
2037	13.2	0.7	0.0	chr6	152451469	152451780	(18354199)	C	AluSx	SINE/Alu	(0)	312	1	3533549
240	33.0	2.5	4.2	chr6	152451781	152451842	(18354137)	C	MIRc	SINE/MIR	(101)	167	107	3533548
314	28.7	3.1	1.1	chr6	152451881	152451975	(18354004)	C	MIRc	SINE/MIR	(50)	218	122	3533550
18	12.6	0.0	0.0	chr6	152452002	152452028	(18353951)	+	(A)n	Simple_repeat	1	27	(0)	3533551
911	12.8	14.8	0.0	chr6	153000249	153000444	(17805535)	C	MER33	DNA/hAT-Charlie	(94)	230	1	3534317
191	20.6	0.0	0.0	chr6	153000525	153000558	(17805421)	C	L2b	LINE/L2	(10)	3365	3332	3534318
335	36.6	11.6	6.3	chr6	153000699	153000867	(17805112)	+	L2	LINE/L2	1920	2083	(1336)	3534319
2711	24.6	4.0	7.1	chr6	155544499	155545282	(15260697)	C	LTR41B	LTR/ERVL	(0)	758	1	3538277
33	11.8	0.0	0.0	chr6	159010120	159010169	(11795810)	+	(TGCC)n	Simple_repeat	1	50	(0)	3543530
87	2.4	0.0	0.0	chr6	159010170	159010255	(11795724)	+	(CCTT)n	Simple_repeat	1	86	(0)	3543531
1599	17.2	2.6	1.5	chr6	160986433	160986694	(9819285)	C	AluJb	SINE/Alu	(46)	266	2	3546046
545	27.7	4.2	11.4	chr6	160986695	160987053	(9818926)	C	L2c	LINE/L2	(0)	3387	3056	3546047
155	30.9	4.3	1.5	chr6	161001316	161001368	(9804611)	+	(AT)n	Simple_repeat	2	53	(0)	3546069
285	29.4	7.7	6.1	chr6	161001468	161001669	(9804310)	+	L2a	LINE/L2	3181	3386	(40)	3546070
443	30.9	8.2	0.8	chr6	161001673	161001858	(9804121)	+	MIRb	SINE/MIR	27	226	(4)	3546071
47	3.0	4.3	0.0	chr6	161219815	161219872	(9586107)	+	(AGAT)n	Simple_repeat	1	61	(0)	3546343
90	5.0	0.9	0.0	chr6	161219873	161219977	(9586002)	+	(AGGC)n	Simple_repeat	1	106	(0)	3546344
47	3.0	4.3	0.0	chr6	161219978	161219987	(9585992)	+	(AGAT)n	Simple_repeat	2	11	(0)	3546345
341	31.7	18.9	3.2	chr6	161506854	161507264	(9298715)	+	L3	LINE/CR1	3601	4091	(8)	3546795
245	31.6	6.4	5.4	chr6	161793495	161793715	(9012264)	C	L2c	LINE/L2	(0)	3387	3138	3547230
1813	14.3	0.8	0.0	chr6	161923202	161923446	(8882533)	+	AluSx	SINE/Alu	1	247	(65)	3547425
599	30.4	8.4	8.6	chr6	162621210	162621627	(8184352)	+	MLT1H2	LTR/ERVL-MaLR	69	485	(4)	3548433
969	34.0	7.2	2.6	chr6	163219029	163219608	(7586371)	+	L2a	LINE/L2	2296	2904	(515)	3549162
553	33.3	7.2	2.0	chr6	163219700	163220159	(7585820)	+	L2a	LINE/L2	2922	3407	(19)	3549162
328	28.8	12.8	4.1	chr6	166313294	166313463	(4492516)	C	MIR	SINE/MIR	(53)	209	23	3553096
550	17.6	18.6	1.0	chr6	166313485	166313691	(4492288)	C	Charlie1b	DNA/hAT-Charlie	(4)	519	268	3553097
346	38.5	0.6	0.6	chr6	167343558	167343724	(3462255)	C	L1M3a	LINE/L1	(5503)	452	286	3554308
14459	17.2	5.3	1.7	chr6	167343722	167347367	(3458612)	+	L1MA7	LINE/L1	2265	6060	(231)	3554309
20	14.4	0.0	0.0	chr6	168721161	168721192	(2084787)	+	(T)n	Simple_repeat	1	32	(0)	3555733
437	30.4	8.2	0.7	chr6	168721240	168721385	(2084594)	+	MIRb	SINE/MIR	8	165	(103)	3555734
1404	26.5	3.5	3.5	chr6	168721387	168721844	(2084135)	+	MLT1C	LTR/ERVL-MaLR	1	458	(9)	3555735
12	26.6	0.0	2.3	chr7	519254	519296	(158826677)	+	G-rich	Low_complexity	1	43	(0)	3558444
52	26.9	3.8	5.0	chr7	519432	519719	(158826254)	+	(CCGCCGC)n	Simple_repeat	1	299	(0)	3558445
2238	9.4	0.3	0.0	chr7	6932124	6932421	(152413552)	+	AluSx1	SINE/Alu	2	300	(12)	3570409
6574	14.9	5.9	0.8	chr7	9616598	9617750	(149728223)	C	Tigger3b	DNA/TcMar-Tigger	(15)	1216	1	3573935
1632	20.9	6.6	0.8	chr7	9870553	9870910	(149475063)	+	MLT1B	LTR/ERVL-MaLR	4	383	(7)	3574257
49	29.4	1.8	1.7	chr7	20749024	20749193	(138596780)	+	(CTTT)n	Simple_repeat	1	173	(0)	3588203
42	16.3	1.1	2.2	chr7	20749140	20749228	(138596745)	+	(CCTC)n	Simple_repeat	1	90	(0)	3588204
1570	16.1	1.1	3.7	chr7	20749229	20749501	(138596472)	C	AluJb	SINE/Alu	(10)	302	37	3588205
369	35.5	10.2	5.2	chr7	20749551	20750305	(138595668)	C	L2c	LINE/L2	(0)	3387	2586	3588206
11	23.7	8.5	0.0	chr7	20798600	20798658	(138547315)	+	G-rich	Low_complexity	1	64	(0)	3588276
858	19.0	2.4	0.0	chr7	20798825	20798987	(138546986)	C	MER5A	DNA/hAT-Charlie	(22)	167	1	3588277
2393	11.3	0.0	0.0	chr7	23085605	23085895	(136260078)	+	AluSc	SINE/Alu	1	291	(18)	3591695
10273	6.1	2.6	1.7	chr7	23085896	23086085	(136259888)	C	PRIMA41-int	LTR/ERV1	(5840)	1916	1726	3591692
181	21.4	0.0	2.3	chr7	23086172	23086214	(136259759)	+	X7A_LINE	LINE/CR1	98	139	(128)	3591696
45	0.0	0.0	0.0	chr7	23086328	23086376	(136259597)	+	(A)n	Simple_repeat	1	49	(0)	3591697
284	28.6	4.0	4.8	chr7	25311168	25311292	(134034681)	+	MLT1K	LTR/ERVL-MaLR	470	593	(2)	3595253
2592	16.9	1.3	0.4	chr7	26135373	26135829	(133210144)	C	MER65C	LTR/ERV1	(0)	461	1	3596480
1776	16.7	0.7	4.3	chr7	27997574	27997873	(131348100)	C	AluJr	SINE/Alu	(23)	289	1	3599335
583	24.4	5.4	11.1	chr7	27997874	27997973	(131348000)	+	HAL1	LINE/L1	816	905	(1602)	3599333
64	15.9	0.8	0.8	chr7	27997977	27998097	(131347876)	+	GA-rich	Low_complexity	1	122	(0)	3599336
233	30.6	3.4	1.2	chr7	27998124	27998209	(131347764)	C	MIR3	SINE/MIR	(87)	121	34	3599337
431	32.0	5.7	6.5	chr7	30322429	30322873	(129023100)	C	MLT1M	LTR/ERVL-MaLR	(184)	488	48	3602980
1980	13.1	2.3	4.4	chr7	30562660	30563014	(128782959)	C	THE1D	LTR/ERVL-MaLR	(0)	381	26	3603324
3965	4.5	0.0	1.1	chr7	30807527	30807994	(128537979)	+	LTR2	LTR/ERV1	1	463	(0)	3603706
86	14.9	0.0	0.7	chr7	31793962	31794109	(127551864)	+	(GATA)n	Simple_repeat	1	148	(0)	3605212
85	21.5	0.0	0.6	chr7	31794110	31794131	(127551842)	+	(ACAG)n	Simple_repeat	37	177	(0)	3605211
27	0.0	3.5	0.0	chr7	31794133	31794161	(127551812)	+	(CAGA)n	Simple_repeat	1	30	(0)	3605213
549	10.0	0.0	0.0	chr7	31794263	31794342	(127551631)	+	MADE1	DNA/TcMar-Mariner	1	80	(0)	3605214
1612	21.9	0.9	14.4	chr7	33113432	33113774	(126232199)	+	MER65C	LTR/ERV1	1	282	(179)	3607386
2276	11.6	1.0	0.0	chr7	33113775	33114076	(126231897)	C	AluSg	SINE/Alu	(5)	305	1	3607387
3828	10.8	1.4	2.8	chr7	33287834	33288406	(126057567)	+	MER61E	LTR/ERV1	1	565	(4)	3607640
415	31.8	9.7	3.0	chr7	33299674	33299903	(126046070)	C	MIR	SINE/MIR	(10)	252	6	3607653
1694	25.4	10.6	1.3	chr7	33299938	33300392	(126045581)	C	LTR33	LTR/ERVL	(13)	502	1	3607654
634	32.6	5.2	1.4	chr7	34277647	34278001	(125067972)	C	ERVL-E-int	LTR/ERVL	(491)	5176	4808	3609064
351	27.2	9.3	14.1	chr7	36774338	36774615	(122571358)	C	MLT2C2	LTR/ERVL	(0)	464	41	3612803
666	18.5	3.1	7.7	chr7	36774616	36774785	(122571188)	C	MLT1E3	LTR/ERVL-MaLR	(402)	222	61	3612804
209	29.9	13.5	0.0	chr7	37002782	37002858	(122343115)	C	L2a	LINE/L2	(24)	3402	3314	3613131
730	22.7	0.0	0.0	chr7	37003242	37003373	(122342600)	+	FLAM_A	SINE/Alu	1	132	(10)	3613132
12	26.7	7.7	0.0	chr7	37920630	37920694	(121425279)	+	(AGCAGTG)n	Simple_repeat	1	70	(0)	3614414
2539	6.2	0.0	0.7	chr7	40531669	40531973	(118814000)	C	AluY	SINE/Alu	(8)	303	1	3618600
1555	16.3	2.5	7.3	chr7	43644524	43644696	(115701277)	C	AluJo	SINE/Alu	(9)	303	131	3622918
68	0.0	0.0	1.5	chr7	43644697	43644761	(115701212)	+	(ATAG)n	Simple_repeat	1	65	(0)	3622919
1555	16.3	2.5	7.3	chr7	43644762	43644791	(115701182)	C	AluJo	SINE/Alu	(182)	130	113	3622918
45	2.4	0.0	0.0	chr7	43644792	43644834	(115701139)	+	(AG)n	Simple_repeat	1	43	(0)	3622920
1555	16.3	2.5	7.3	chr7	43644835	43644918	(115701055)	C	AluJo	SINE/Alu	(200)	112	29	3622918
2169	14.0	0.0	0.0	chr7	43836160	43836467	(115509506)	+	AluSx1	SINE/Alu	2	309	(3)	3623250
2670	19.4	5.2	8.4	chr7	43836468	43837083	(115508890)	+	MER65-int	LTR/ERV1	709	1321	(3550)	3623249
2792	9.9	0.0	0.3	chr7	47285285	47285649	(112060324)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3628342
296	18.2	2.9	0.0	chr7	55523313	55523378	(103822595)	+	L1MA4	LINE/L1	6223	6290	(10)	3638761
1646	16.1	15.0	1.6	chr7	55523421	55523799	(103822174)	+	MER65C	LTR/ERV1	1	439	(22)	3638762
362	27.1	6.2	0.7	chr7	55523802	55523953	(103822020)	+	L1MC5a	LINE/L1	749	884	(1893)	3638763
94	10.7	1.1	1.1	chr7	57495470	57495644	(101850329)	+	(GGAAT)n	Simple_repeat	1	177	(0)	3642547
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
1865	19.0	2.7	9.7	chr7	64314514	64314569	(95031404)	C	MER57E3	LTR/ERV1	(0)	487	430	3646142
600	26.4	6.7	6.0	chr7	67344528	67344809	(92001164)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	128	3651998
3871	8.9	3.2	2.8	chr7	67344815	67345377	(92000596)	+	MER61E	LTR/ERV1	1	565	(4)	3651999
2005	11.2	0.4	0.0	chr7	67357516	67357783	(91988190)	C	AluSx	SINE/Alu	(14)	298	30	3652031
3004	14.5	3.5	4.2	chr7	67357784	67357931	(91988042)	C	MER61E	LTR/ERV1	(420)	149	2	3652029
4317	10.1	7.2	3.6	chr7	67357988	67358159	(91987814)	C	LTR8	LTR/ERV1	(0)	691	534	3652032
2326	8.3	1.0	2.6	chr7	67358160	67358471	(91987502)	C	AluSc	SINE/Alu	(2)	307	1	3652033
286	30.5	10.4	3.1	chr7	67708942	67709137	(91636836)	+	L2b	LINE/L2	2280	2491	(928)	3652831
3597	13.3	2.8	2.5	chr7	67709138	67709698	(91636275)	+	MER61E	LTR/ERV1	1	563	(6)	3652836
534	20.2	3.5	14.5	chr7	69590752	69590928	(89755045)	+	L1ME3C	LINE/L1	5941	6084	(158)	3657049
6973	12.2	5.9	5.4	chr7	69590929	69592200	(89753773)	C	MER52C	LTR/ERV1	(0)	1278	1	3657051
15	5.6	0.0	0.0	chr7	69764377	69764395	(89581578)	+	(T)n	Simple_repeat	1	19	(0)	3657339
1908	13.5	0.0	0.4	chr7	73601565	73601831	(85744142)	C	AluSz6	SINE/Alu	(46)	266	1	3665021
31	8.7	1.4	6.8	chr7	73602057	73602070	(85743903)	+	(CTTC)n	Simple_repeat	1	13	(0)	3665022
66	1.6	0.0	0.0	chr7	73602071	73602133	(85743840)	+	(CCTG)n	Simple_repeat	1	63	(0)	3665023
31	8.7	1.4	6.8	chr7	73602134	73602190	(85743783)	+	(CTTC)n	Simple_repeat	2	55	(0)	3665024
24	14.3	0.0	2.4	chr7	73602164	73602205	(85743768)	+	(CT)n	Simple_repeat	1	42	(0)	3665025
1120	9.3	3.8	0.7	chr7	73602206	73602356	(85743617)	C	AluSx	SINE/Alu	(1)	311	156	3665026
1593	21.9	5.1	3.2	chr7	80451219	80451422	(78894551)	C	MER39	LTR/ERV1	(0)	707	500	3678219
2457	10.6	1.6	0.8	chr7	80451423	80451783	(78894190)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3678220
1593	19.5	11.7	6.2	chr7	80451784	80452086	(78893887)	C	MER39	LTR/ERV1	(208)	499	6	3678219
61	0.0	0.0	0.0	chr7	82393032	82393086	(76952887)	+	(AGGA)n	Simple_repeat	1	55	(0)	3680824
54	14.2	0.0	0.0	chr7	82393087	82393178	(76952795)	+	(AGGC)n	Simple_repeat	3	94	(0)	3680825
3309	13.9	5.1	0.7	chr7	83708228	83708808	(75637165)	C	L1MCa	LINE/L1	(5291)	1217	610	3682620
547	28.0	3.7	7.5	chr7	83708811	83708852	(75637121)	+	LTR48B	LTR/ERV1	1	39	(748)	3682621
3681	11.9	1.8	4.3	chr7	83708853	83709432	(75636541)	+	MER61E	LTR/ERV1	1	565	(4)	3682622
4477	9.3	1.4	0.2	chr7	87330749	87331310	(72014663)	C	MER61E	LTR/ERV1	(0)	569	1	3687051
4066	15.1	5.5	2.3	chr7	87331453	87332152	(72013821)	+	LTR8A	LTR/ERV1	4	727	(0)	3687053
34	0.0	0.0	0.0	chr7	98570346	98570377	(60775596)	+	(ATTC)n	Simple_repeat	1	32	(0)	3702897
185	30.8	8.8	0.0	chr7	98570386	98570489	(60775484)	C	L2a	LINE/L2	(20)	3406	3293	3702898
400	10.8	0.2	2.5	chr7	98810993	98811637	(60534336)	+	(TGG)n	Simple_repeat	1	646	(0)	3703453
31	0.0	0.0	0.0	chr7	99145635	99145661	(60200312)	+	(TG)n	Simple_repeat	1	27	(0)	3704041
37	2.6	0.0	0.0	chr7	99145771	99145809	(60200164)	+	(CCTG)n	Simple_repeat	1	39	(0)	3704042
193	29.1	0.0	0.0	chr7	99145862	99145916	(60200057)	+	MIR3	SINE/MIR	131	185	(23)	3704043
588	24.2	4.6	4.6	chr7	100277242	100277348	(59068625)	C	MLT1G3	LTR/ERVL-MaLR	(487)	108	3	3706219
27	0.0	0.0	0.0	chr7	100277412	100277437	(59068536)	+	(CTGC)n	Simple_repeat	1	26	(0)	3706223
2206	11.2	1.4	0.0	chr7	100277445	100277742	(59068231)	C	AluSx	SINE/Alu	(10)	302	1	3706224
308	31.5	12.4	5.0	chr7	103413434	103413791	(55932182)	C	LTR78B	LTR/ERV1	(524)	780	393	3712709
3859	12.8	4.5	4.9	chr7	103413798	103414190	(55931783)	C	L1MC1	LINE/L1	(0)	6333	5944	3712710
1507	27.7	8.6	1.3	chr7	106100590	106101264	(53244709)	+	L2a	LINE/L2	2601	3350	(76)	3717098
31	0.0	0.0	0.0	chr7	106101439	106101467	(53244506)	+	(C)n	Simple_repeat	1	29	(0)	3717099
185	29.1	9.5	5.5	chr7	106358102	106358192	(52987781)	C	L2c	LINE/L2	(5)	3382	3288	3717465
636	36.2	1.8	1.5	chr7	106358195	106358590	(52987383)	C	ERVL-E-int	LTR/ERVL	(5155)	512	116	3717466
3265	17.8	6.6	0.5	chr7	110734029	110734651	(48611322)	+	MLT1A1-int	LTR/ERVL-MaLR	2	665	(1070)	3723409
983	15.3	0.6	1.2	chr7	110734654	110734719	(48611254)	+	MER61E	LTR/ERV1	1	66	(503)	3723410
30	0.0	3.1	0.0	chr7	110734720	110734751	(48611222)	+	(CAAA)n	Simple_repeat	1	33	(0)	3723411
983	15.3	0.6	1.2	chr7	110734752	110734856	(48611117)	+	MER61E	LTR/ERV1	67	171	(398)	3723410
471	33.7	2.6	1.6	chr7	110734888	110735074	(48610899)	+	MLT1J	LTR/ERVL-MaLR	112	300	(212)	3723412
2077	18.4	2.1	6.0	chr7	111621783	111622208	(47723765)	+	MER92-int	LTR/ERV1	3717	4128	(1090)	3724601
3675	12.1	2.1	2.6	chr7	111622209	111622776	(47723197)	+	MER61E	LTR/ERV1	1	565	(4)	3724605
15	30.3	0.0	1.7	chr7	112939807	112939864	(46406109)	+	GA-rich	Low_complexity	1	58	(0)	3726481
115	19.8	2.5	1.4	chr7	116716339	116716569	(42629404)	+	GA-rich	Low_complexity	43	279	(0)	3731459
14	21.9	2.0	3.9	chr7	116716839	116716889	(42629084)	+	(TGGC)n	Simple_repeat	1	52	(0)	3731460
336	25.7	0.9	4.2	chr7	121531371	121531488	(37814485)	C	Tigger16a	DNA/TcMar-Tigger	(7)	950	837	3737831
879	22.1	10.6	0.5	chr7	122080263	122080449	(37265524)	+	MER58A	DNA/hAT-Charlie	1	208	(16)	3738601
926	11.2	0.0	0.7	chr7	122080624	122080767	(37265206)	+	L1MA3	LINE/L1	6163	6305	(0)	3738602
587	27.3	8.8	1.7	chr7	128454161	128454339	(30891634)	C	MIR	SINE/MIR	(1)	261	69	3747270
12	13.7	0.0	0.0	chr7	128783387	128783410	(30562563)	+	(CTG)n	Simple_repeat	1	24	(0)	3747962
653	0.0	0.0	0.0	chr7	128783450	128783521	(30562452)	+	tRNA-Pro-CCY	tRNA	1	72	(3)	3747963
2094	20.0	1.5	0.9	chr7	133985293	133985750	(25360223)	+	MER65C	LTR/ERV1	1	461	(0)	3756771
15	16.3	4.7	2.2	chr7	134779647	134779689	(24566284)	+	(CTGC)n	Simple_repeat	1	45	(0)	3758022
2354	9.3	0.0	1.0	chr7	135513236	135513535	(23832438)	+	AluSq	SINE/Alu	1	297	(16)	3759077
1782	13.7	1.0	8.1	chr7	135513545	135513879	(23832094)	+	AluJb	SINE/Alu	1	311	(1)	3759078
268	30.9	10.2	6.5	chr7	135513880	135513960	(23832013)	C	L2a	LINE/L2	(376)	3011	2920	3759076
2042	15.0	0.3	1.0	chr7	135513961	135514095	(23831878)	+	AluSz	SINE/Alu	1	135	(177)	3759079
500	26.9	10.7	2.0	chr7	135711441	135711637	(23634336)	C	MIRb	SINE/MIR	(18)	250	35	3759450
26	0.0	0.0	0.0	chr7	135711749	135711773	(23634200)	+	(TGTTTT)n	Simple_repeat	1	25	(0)	3759451
1591	13.7	2.1	11.5	chr7	135711774	135711963	(23634010)	C	AluSz	SINE/Alu	(28)	284	121	3759452
392	19.9	2.5	2.6	chr7	136026894	136027019	(23318954)	+	Charlie17	DNA/hAT-Charlie	2826	2916	(0)	3760008
308	27.1	15.1	0.0	chr7	136027120	136027215	(23318758)	C	MIR3	SINE/MIR	(20)	188	76	3760009
1824	35.3	10.2	3.9	chr7	136027260	136028904	(23317069)	+	L2c	LINE/L2	1586	3349	(38)	3760010
716	26.5	5.6	3.1	chr7	137978278	137978503	(21367470)	+	MER102c	DNA/hAT-Charlie	75	306	(25)	3762689
625	23.2	4.5	4.0	chr7	138223127	138223324	(21122649)	C	LTR37B	LTR/ERV1	(0)	468	270	3763151
371	15.5	5.2	0.0	chr7	138223354	138223423	(21122550)	+	FLAM_C	SINE/Alu	1	76	(225)	3763152
2144	21.5	5.5	7.8	chr7	138223473	138224091	(21121882)	+	MER61E	LTR/ERV1	92	779	(0)	3763153
4102	9.7	1.4	2.5	chr7	138431304	138431874	(20914099)	C	MER61E	LTR/ERV1	(4)	565	1	3763623
583	22.8	1.3	0.7	chr7	138431941	138432063	(20913910)	C	HAL1	LINE/L1	(921)	1586	1463	3763624
30	0.0	0.0	0.0	chr7	138432064	138432091	(20913882)	+	(GTTT)n	Simple_repeat	1	28	(0)	3763625
583	22.8	1.3	0.7	chr7	138432092	138432117	(20913856)	C	HAL1	LINE/L1	(1045)	1462	1436	3763624
1074	17.9	3.0	15.3	chr7	138432119	138432464	(20913509)	+	AluJo	SINE/Alu	1	302	(10)	3763626
2269	11.5	12.0	0.3	chr7	138513373	138513748	(20832225)	C	MSTA	LTR/ERVL-MaLR	(2)	426	1	3763777
722	23.4	12.8	9.2	chr7	138513749	138513870	(20832103)	C	L1MC5	LINE/L1	(2013)	7291	7166	3763765
266	32.3	3.5	6.3	chr7	139783835	139784009	(19561964)	+	L2c	LINE/L2	1985	2154	(1265)	3766176
16	9.3	0.0	0.0	chr7	139784012	139784034	(19561939)	+	(T)n	Simple_repeat	1	23	(0)	3766177
20	6.8	0.0	0.0	chr7	139784069	139784099	(19561874)	+	(TTGTTT)n	Simple_repeat	1	31	(0)	3766178
33	5.2	0.0	0.0	chr7	139784111	139784150	(19561823)	+	(GCCT)n	Simple_repeat	1	40	(0)	3766179
14	4.3	4.2	0.0	chr7	139784151	139784174	(19561799)	+	(TCCC)n	Simple_repeat	1	25	(0)	3766180
56	14.7	1.8	1.8	chr7	139784174	139784284	(19561689)	+	(TTCT)n	Simple_repeat	1	113	(0)	3766181
311	32.7	7.0	7.8	chr7	139784297	139784528	(19561445)	C	L2c	LINE/L2	(8)	3379	3150	3766182
210	26.3	6.9	5.9	chr7	140048057	140048157	(19297816)	+	MamSINE1	SINE/tRNA-RTE	163	264	(26)	3766631
25	11.4	0.0	0.0	chr7	140639440	140639477	(18706496)	+	(AC)n	Simple_repeat	1	38	(0)	3767935
2289	10.6	0.0	0.7	chr7	141529683	141529983	(17815990)	+	AluSx1	SINE/Alu	1	299	(13)	3769440
1057	30.5	6.8	6.8	chr7	142452726	142453309	(16892664)	C	MLT2E	LTR/ERVL	(25)	603	20	3770644
224	26.1	2.8	2.8	chr7	142783220	142783290	(16562683)	+	MIR3	SINE/MIR	92	162	(46)	3770999
894	29.8	17.3	4.6	chr7	148208764	148209131	(11136842)	+	L2b	LINE/L2	2049	2463	(956)	3778402
1575	17.3	3.7	6.0	chr7	148209132	148209432	(11136541)	C	AluJo	SINE/Alu	(18)	294	1	3778403
894	29.7	14.4	3.8	chr7	148209433	148210009	(11135964)	+	L2b	LINE/L2	2464	3130	(245)	3778402
248	29.6	1.4	0.0	chr7	148235353	148235423	(11110550)	C	MLT1J1	LTR/ERVL-MaLR	(8)	436	365	3778451
1740	26.8	6.9	4.1	chr7	148235455	148235685	(11110288)	C	MLT1J1-int	LTR/ERVL-MaLR	(312)	1075	845	3778451
1011	13.6	0.0	1.3	chr7	148899519	148899672	(10446301)	C	AluJr	SINE/Alu	(4)	308	157	3779565
2211	8.8	3.6	0.0	chr7	151314821	151315114	(8030859)	+	AluSz	SINE/Alu	1	305	(7)	3783231
1245	25.4	14.2	2.4	chr7	151315291	151315915	(8030058)	C	Charlie2b	DNA/hAT-Charlie	(41)	2741	2031	3783232
651	22.1	5.0	1.7	chr7	151504588	151504744	(7841229)	+	L1ME1	LINE/L1	5802	5965	(214)	3783549
3267	21.8	9.6	5.6	chr7	151504959	151506157	(7839816)	+	L1ME1	LINE/L1	4958	6179	(0)	3783554
38	0.0	2.1	0.0	chr7	151870108	151870154	(7475819)	+	(AGAT)n	Simple_repeat	1	48	(0)	3784155
51	0.0	0.0	0.0	chr7	151870155	151870200	(7475773)	+	(AGGC)n	Simple_repeat	1	46	(0)	3784156
407	31.1	3.2	2.7	chr7	151870270	151870457	(7475516)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	3784157
2426	20.3	3.9	7.0	chr7	151970110	151970332	(7375641)	C	LTR71B	LTR/ERV1	(412)	198	2	3784341
1105	24.0	6.1	11.7	chr7	151970333	151970383	(7375590)	C	L1M3	LINE/L1	(1215)	4931	4877	3784340
2008	17.8	6.6	0.2	chr7	151970384	151970782	(7375191)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	3784343
85	17.4	1.7	0.6	chr7	157587116	157587287	(1758686)	+	(ACAG)n	Simple_repeat	1	175	(0)	3792603
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
735	21.7	0.8	0.3	chr8	350184	351729	(144786907)	+	(TAGG)n	Simple_repeat	1	1559	(0)	3794731
110	15.1	0.5	0.0	chr8	6259092	6259281	(138879355)	+	GA-rich	Low_complexity	1	191	(0)	3801743
1276	24.6	8.2	2.7	chr8	9378193	9378387	(135760249)	+	Charlie7	DNA/hAT-Charlie	2021	2236	(376)	3806394
98	16.0	0.5	1.1	chr8	9378389	9378572	(135760064)	+	GA-rich	Low_complexity	1	185	(0)	3806397
1007	22.6	13.9	3.5	chr8	9433984	9434684	(135703952)	+	LTR27D	LTR/ERV1	1	783	(61)	3806501
15	14.5	5.3	0.0	chr8	11553700	11553737	(133584899)	+	G-rich	Low_complexity	1	40	(0)	3809774
391	29.4	1.2	5.9	chr8	11554088	11554257	(133584379)	+	Charlie22a	DNA/hAT-Charlie	97	258	(233)	3809775
23	33.0	0.9	2.7	chr8	12754858	12754968	(132383668)	+	(GCG)n	Simple_repeat	1	112	(0)	3811505
2353	9.9	0.3	0.3	chr8	15546533	15546835	(129591801)	C	AluSp	SINE/Alu	(10)	303	1	3815564
17	18.4	0.0	0.0	chr8	15546874	15546910	(129591726)	+	(TGCC)n	Simple_repeat	1	37	(0)	3815565
2301	16.0	5.0	0.7	chr8	15582576	15583016	(129555620)	+	MER65C	LTR/ERV1	1	461	(0)	3815608
352	31.2	0.0	0.0	chr8	15583040	15583151	(129555485)	C	MER94	DNA/hAT-Blackjack	(3)	131	20	3815609
108	8.3	0.0	0.0	chr8	26002827	26002970	(119135666)	+	(CAGG)n	Simple_repeat	1	144	(0)	3831929
2275	8.8	1.0	0.7	chr8	26053651	26053944	(119084692)	C	AluSz	SINE/Alu	(17)	295	1	3831987
1483	16.4	10.3	1.4	chr8	33464535	33464809	(111673827)	+	AluJb	SINE/Alu	8	309	(3)	3844541
336	24.7	8.5	1.0	chr8	33464994	33465091	(111673545)	+	MIR	SINE/MIR	34	139	(123)	3844542
267	30.1	2.8	0.0	chr8	37360024	37360126	(107778510)	+	MIR3	SINE/MIR	48	153	(55)	3850196
2032	13.5	0.3	4.6	chr8	37782807	37783132	(107355504)	+	AluJr	SINE/Alu	1	312	(0)	3850959
14	16.6	0.0	5.1	chr8	37783133	37783171	(107355465)	+	A-rich	Low_complexity	1	39	(0)	3850960
537	26.0	12.5	5.4	chr8	38956763	38956974	(106181662)	+	MIRb	SINE/MIR	30	254	(8)	3853274
15	7.8	3.7	0.0	chr8	38956977	38957003	(106181633)	+	(GGAA)n	Simple_repeat	1	28	(0)	3853276
188	15.9	0.0	10.2	chr8	38957162	38957210	(106181426)	C	L2	LINE/L2	(2785)	634	591	3853277
3917	11.0	1.9	0.0	chr8	40256869	40257422	(104881214)	C	MER61E	LTR/ERV1	(4)	565	1	3855084
516	36.8	7.9	4.4	chr8	40257423	40257542	(104881094)	+	LTR104_Mam	LTR/Gypsy	1233	1354	(155)	3855083
3789	16.2	1.0	5.9	chr8	40257618	40258344	(104880292)	C	LTR8	LTR/ERV1	(0)	691	1	3855085
268	27.2	5.2	1.1	chr8	40952907	40952999	(104185637)	C	L2a	LINE/L2	(0)	3426	3330	3856174
261	33.3	5.1	0.0	chr8	40953726	40953818	(104184818)	+	L2c	LINE/L2	3048	3145	(242)	3856175
430	30.3	4.1	2.9	chr8	41139801	41139970	(103998666)	+	MIRb	SINE/MIR	35	206	(62)	3856498
24	6.7	0.0	0.0	chr8	41140106	41140137	(103998499)	+	(TC)n	Simple_repeat	1	32	(0)	3856499
20	0.0	0.0	0.0	chr8	41140137	41140158	(103998478)	+	(CA)n	Simple_repeat	1	22	(0)	3856500
2383	12.5	0.0	0.3	chr8	41365983	41366295	(103772341)	+	AluSx1	SINE/Alu	1	312	(0)	3856858
2472	17.7	1.7	4.0	chr8	41366296	41366687	(103771949)	C	MER65C	LTR/ERV1	(68)	393	1	3856857
1702	22.7	6.3	11.0	chr8	41366688	41366826	(103771810)	+	L1MC3	LINE/L1	7645	7784	(1)	3856856
15	25.2	1.2	7.3	chr8	42153361	42153441	(102985195)	+	(GCGCCT)n	Simple_repeat	1	82	(0)	3858238
633	14.7	0.0	7.8	chr8	42153654	42153782	(102984854)	C	FLAM_C	SINE/Alu	(11)	132	14	3858239
2091	24.1	13.9	4.2	chr8	42390643	42391086	(102747550)	C	L1MC4	LINE/L1	(424)	7618	7093	3858707
220	30.0	2.8	2.8	chr8	42391116	42391187	(102747449)	+	MIRc	SINE/MIR	77	148	(120)	3858710
1460	13.8	1.2	5.2	chr8	42391246	42391514	(102747122)	+	AluJo	SINE/Alu	1	258	(54)	3858711
2665	16.5	1.1	5.2	chr8	55210612	55211171	(89927465)	C	MER61E	LTR/ERV1	(0)	666	1	3872112
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
828	29.3	5.5	3.9	chr8	57210498	57210965	(87927671)	C	MER50	LTR/ERV1	(231)	503	28	3874994
1485	28.3	1.5	2.6	chr8	57214477	57215085	(87923551)	C	MER50	LTR/ERV1	(123)	611	10	3874995
2924	25.4	6.4	5.4	chr8	59454654	59455882	(85682754)	C	L1ME1	LINE/L1	(1287)	4859	3617	3877910
718	7.8	0.0	0.0	chr8	59455885	59455974	(85682662)	+	5S	rRNA	1	90	(31)	3877916
83	30.2	0.0	0.8	chr8	59456023	59456270	(85682366)	+	(TCCC)n	Simple_repeat	1	248	(0)	3877917
366	31.6	14.4	7.4	chr8	60243281	60243602	(84895034)	+	L2	LINE/L2	1649	2010	(1409)	3878855
288	33.2	14.0	6.5	chr8	61695153	61695799	(83442837)	+	L2b	LINE/L2	2670	3387	(0)	3880974
1874	16.2	0.0	0.3	chr8	66546606	66546895	(78591741)	C	AluJr	SINE/Alu	(3)	309	21	3887588
357	21.1	1.4	0.6	chr8	81266282	81266424	(63872212)	C	L1ME3A	LINE/L1	(498)	5744	5537	3909033
4005	15.6	5.3	5.6	chr8	81345484	81346360	(63792276)	C	L1MB7	LINE/L1	(55)	6129	5256	3909148
2252	19.3	2.7	0.9	chr8	81346367	81346805	(63791831)	C	MER65C	LTR/ERV1	(0)	461	15	3909149
351	15.7	0.5	0.0	chr8	81346808	81346874	(63791762)	C	L1MB7	LINE/L1	(896)	5250	5181	3909148
812	18.1	0.0	0.7	chr8	81589277	81589414	(63549222)	+	AluJo	SINE/Alu	3	139	(173)	3909468
417	33.5	6.4	1.1	chr8	81589551	81589728	(63548908)	C	LTR78B	LTR/ERV1	(834)	462	275	3909469
519	25.7	12.3	8.4	chr8	93698482	93698872	(51439764)	+	MLT1H2	LTR/ERVL-MaLR	70	477	(12)	3925653
259	35.5	3.1	1.9	chr8	93698902	93699059	(51439577)	+	L2b	LINE/L2	3264	3423	(3)	3925648
304	13.5	0.0	0.0	chr8	96615108	96615159	(48523477)	C	L2	LINE/L2	(1080)	2339	2288	3930567
2968	20.4	7.5	4.2	chr8	96615176	96615262	(48523374)	C	MER44C	DNA/TcMar-Tigger	(0)	733	650	3930568
2867	14.7	1.1	2.4	chr8	96615263	96615673	(48522963)	+	MER65C	LTR/ERV1	1	406	(55)	3930569
32	0.0	5.4	0.0	chr8	96615674	96615710	(48522926)	+	(ATTTT)n	Simple_repeat	1	39	(0)	3930570
10226	12.9	2.7	1.5	chr8	96653453	96655024	(48483612)	C	Tigger2	DNA/TcMar-Tigger	(0)	2718	1128	3930645
502	21.4	5.1	1.5	chr8	96655025	96655157	(48483479)	C	L1M3b	LINE/L1	(1397)	4947	4810	3930646
4940	24.3	5.4	12.4	chr8	96655145	96655605	(48483031)	C	L1M3b	LINE/L1	(4579)	1702	1293	3930646
181	30.9	4.2	0.0	chr8	97896400	97896467	(47242169)	C	L2	LINE/L2	(1265)	2154	2084	3932679
707	20.9	0.0	0.0	chr8	97897072	97897200	(47241436)	C	MER5A	DNA/hAT-Charlie	(0)	189	61	3932680
288	23.8	9.0	4.7	chr8	101744393	101744520	(43394116)	C	LTR104_Mam	LTR/Gypsy	(1326)	183	50	3939259
328	27.8	18.9	1.1	chr8	101744730	101744907	(43393729)	C	Charlie17a	DNA/hAT-Charlie	(0)	217	1	3939260
408	25.2	4.7	8.9	chr8	101744941	101745119	(43393517)	+	Charlie1a	DNA/hAT-Charlie	151	321	(1134)	3939261
2072	13.1	2.3	0.3	chr8	102678862	102679192	(42459444)	C	AluSx	SINE/Alu	(0)	312	7	3940875
28	3.3	0.0	0.0	chr8	105352826	105352856	(39785780)	+	(TGCC)n	Simple_repeat	1	31	(0)	3945021
13	4.3	3.9	3.7	chr8	105352862	105352887	(39785749)	+	(TACC)n	Simple_repeat	1	27	(0)	3945022
618	26.3	21.9	1.4	chr8	108774179	108774443	(36364193)	+	MLT1J1	LTR/ERVL-MaLR	1	322	(122)	3949870
454	29.3	6.8	2.6	chr8	108774447	108774695	(36363941)	C	MLT1J1	LTR/ERVL-MaLR	(155)	289	68	3949871
1145	27.3	5.0	12.5	chr8	111252875	111253464	(33885172)	C	LTR41	LTR/ERVL	(225)	543	1	3953269
725	28.1	11.1	1.0	chr8	111253467	111253757	(33884879)	C	LTR80B	LTR/ERVL	(260)	324	1	3953268
218	37.1	10.8	0.0	chr8	117108538	117108669	(28029967)	C	MIRc	SINE/MIR	(60)	208	61	3961132
116	12.8	0.0	2.0	chr8	117858709	117858906	(27279730)	+	(GAAG)n	Simple_repeat	1	198	(0)	3962271
2112	13.8	2.0	1.8	chr8	117858907	117859245	(27279391)	+	Tigger1	DNA/TcMar-Tigger	2078	2417	(1)	3962272
406	30.1	10.3	1.6	chr8	120362146	120362331	(24776305)	+	MIR	SINE/MIR	8	211	(51)	3966477
40	0.0	0.0	0.0	chr8	122022558	122022594	(23116042)	+	(TGCC)n	Simple_repeat	1	37	(0)	3969248
80	19.4	5.4	2.4	chr8	122022595	122022833	(23115803)	+	(TCTCC)n	Simple_repeat	1	252	(0)	3969249
180	25.8	7.5	4.6	chr8	124043088	124043152	(21095484)	+	L2a	LINE/L2	3309	3375	(0)	3972989
211	17.9	0.0	0.0	chr8	124043179	124043217	(21095419)	C	L2b	LINE/L2	(12)	3363	3325	3972990
425	29.1	12.9	1.9	chr8	124043185	124043391	(21095245)	C	MIRb	SINE/MIR	(14)	254	22	3972991
2129	11.3	0.0	3.2	chr8	124623624	124623933	(20514703)	C	AluSx	SINE/Alu	(2)	310	11	3974025
17	17.6	4.4	0.0	chr8	133297583	133297627	(11841009)	+	(GTGTGC)n	Simple_repeat	1	47	(0)	3990152
3724	12.8	1.9	0.4	chr8	139179339	139179895	(5958741)	C	MER61E	LTR/ERV1	(0)	569	4	3999945
1168	21.8	9.5	3.3	chr8	139179896	139180064	(5958572)	C	L1MA4	LINE/L1	(233)	6067	5896	3999943
620	18.7	7.9	0.0	chr8	139180070	139180208	(5958428)	C	L1MA4A	LINE/L1	(8)	6295	6145	3999946
255	30.8	4.2	0.0	chr8	139283900	139283990	(5854646)	C	MIR3	SINE/MIR	(27)	181	87	4000103
1951	16.4	1.7	1.4	chr8	140790266	140790624	(4348012)	C	Tigger4b	DNA/TcMar-Tigger	(1)	360	1	4002596
15	5.5	0.0	0.0	chr8	140791165	140791183	(4347453)	+	(TG)n	Simple_repeat	1	19	(0)	4002597
689	24.8	6.6	0.0	chr8	140791200	140791340	(4347296)	C	FAM	SINE/Alu	(34)	151	1	4002598
84	5.8	3.1	1.5	chr8	142217277	142217405	(2921231)	+	(AAAG)n	Simple_repeat	1	133	(0)	4004661
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
2266	18.2	5.6	3.0	chr8	143681844	143682441	(1456195)	C	LTR27	LTR/ERV1	(0)	594	1	4006519
1037	16.4	1.8	1.8	chr8	143682453	143682630	(1456006)	+	MER4E1	LTR/ERV1	1	181	(600)	4006520
923	18.2	8.3	1.6	chr8	144067469	144067725	(1070911)	+	L1M4b	LINE/L1	2005	2280	(4587)	4007048
1700	9.6	0.9	0.0	chr8	144067726	144067944	(1070692)	+	AluSx1	SINE/Alu	1	221	(91)	4007049
2713	13.3	1.1	0.9	chr8	144067956	144068410	(1070226)	+	MER72	LTR/ERV1	267	722	(0)	4007050
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
4623	9.6	1.3	0.0	chr8	144691402	144692003	(446633)	C	LTR71B	LTR/ERV1	(0)	610	1	4007929
12105	17.4	2.9	8.2	chr8	144989087	144991263	(147373)	C	L1PA8	LINE/L1	(4315)	2038	3	4008395
2374	9.8	0.0	0.0	chr9	1757844	1758139	(136636578)	C	AluY	SINE/Alu	(15)	296	1	4011182
233	25.4	1.4	7.8	chr9	1758141	1758217	(136636500)	+	MLT1H	LTR/ERVL-MaLR	83	154	(388)	4011183
799	7.8	0.0	0.0	chr9	1758379	1758480	(136636237)	+	L1PA8	LINE/L1	6057	6158	(14)	4011184
808	24.7	6.9	3.3	chr9	1758522	1758826	(136635891)	+	L1M4b	LINE/L1	1060	1376	(5491)	4011185
2660	16.5	2.2	0.4	chr9	2749543	2749992	(135644725)	+	MER65C	LTR/ERV1	2	459	(2)	4012583
8588	16.7	6.4	3.5	chr9	4805849	4806017	(133588700)	C	L1MD1	LINE/L1	(1656)	4490	4315	4015694
2308	19.6	1.3	0.7	chr9	11864092	11864547	(126530170)	+	MER65C	LTR/ERV1	3	461	(0)	4025522
45	3.6	0.0	0.0	chr9	14719505	14719561	(123675156)	+	(GCCT)n	Simple_repeat	1	57	(0)	4029350
89	1.2	0.0	0.0	chr9	14719562	14719644	(123675073)	+	(CCTT)n	Simple_repeat	1	83	(0)	4029351
425	34.0	3.4	0.0	chr9	14719772	14719915	(123674802)	C	MIR3	SINE/MIR	(10)	198	50	4029352
12	16.9	2.9	2.8	chr9	15882838	15882872	(122511845)	+	(TTGT)n	Simple_repeat	1	36	(0)	4031190
28	0.0	0.0	0.0	chr9	15882993	15883019	(122511698)	+	(CCTT)n	Simple_repeat	1	27	(0)	4031191
1677	15.9	0.0	9.7	chr9	15883038	15883358	(122511359)	C	AluJr	SINE/Alu	(21)	291	2	4031192
28	5.2	0.0	0.0	chr9	20714597	20714634	(117680083)	+	(TGCC)n	Simple_repeat	1	38	(0)	4038319
76	0.0	0.0	0.0	chr9	20714635	20714701	(117680016)	+	(CCTT)n	Simple_repeat	1	67	(0)	4038320
5268	11.5	5.5	1.9	chr9	21903675	21904480	(116490237)	C	LTR1A2	LTR/ERV1	(0)	837	1	4039844
584	21.3	7.3	4.1	chr9	30153722	30153970	(108240747)	C	LTR25	LTR/ERV1	(230)	614	420	4050822
483	19.0	5.3	0.0	chr9	30154088	30154194	(108240523)	C	MER61E	LTR/ERV1	(902)	118	1	4050823
2972	17.3	2.6	0.9	chr9	30154197	30154792	(108239925)	C	L1MCa	LINE/L1	(3467)	2854	2245	4050824
1126	23.3	5.7	4.1	chr9	30188653	30188996	(108205721)	C	LTR25	LTR/ERV1	(27)	817	468	4050868
290	18.8	12.3	0.0	chr9	30188975	30189038	(108205679)	C	MER51A	LTR/ERV1	(354)	280	208	4050869
518	15.4	3.7	0.9	chr9	30189182	30189293	(108205424)	C	MER61E	LTR/ERV1	(472)	122	1	4050870
681	29.6	8.8	4.3	chr9	33987988	33988312	(104406405)	+	L2a	LINE/L2	3084	3424	(2)	4056411
527	13.2	0.0	0.0	chr9	33988864	33988931	(104405786)	+	AluJb	SINE/Alu	2	69	(243)	4056412
12	5.6	0.0	0.0	chr9	34048852	34048870	(104345847)	+	(CCG)n	Simple_repeat	1	19	(0)	4056570
2891	1.6	0.0	0.0	chr9	36257522	36257832	(102136885)	+	AluY	SINE/Alu	1	311	(0)	4060262
1625	20.6	11.9	2.2	chr9	38243611	38243957	(100150760)	+	Zaphod2	DNA/hAT-Tip100	2884	3270	(254)	4064229
984	28.8	12.7	3.9	chr9	38243958	38244473	(100150244)	C	LTR16E2	LTR/ERVL	(0)	568	1	4064230
296	22.0	5.7	2.5	chr9	41229379	41230391	(97164326)	+	(TG)n	Simple_repeat	1	1071	(0)	4068370
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
235	23.8	4.5	3.8	chr9	63823016	63823908	(74570809)	+	(CA)n	Simple_repeat	1	933	(0)	4074777
2605	29.9	5.1	4.7	chr9	65388281	65390272	(73004445)	+	SST1	Satellite/centr	1	2001	(859)	4076190
1981	13.3	1.9	0.0	chr9	68633773	68634035	(69760682)	+	AluSx1	SINE/Alu	1	268	(44)	4080167
689	28.3	4.0	2.9	chr9	68634036	68634228	(69760489)	C	MER102a	DNA/hAT-Charlie	(47)	283	83	4080166
1390	26.6	7.4	1.7	chr9	68634248	68634706	(69760011)	+	LTR16C	LTR/ERVL	3	489	(0)	4080168
361	34.3	2.3	3.8	chr9	69847256	69847476	(68547241)	C	MIRb	SINE/MIR	(42)	226	2	4082193
24	12.6	0.0	0.0	chr9	74496687	74496722	(63897995)	+	(T)n	Simple_repeat	1	36	(0)	4089477
1578	20.2	3.4	2.0	chr9	75103019	75103310	(63291407)	+	AluJr4	SINE/Alu	15	310	(2)	4090546
606	21.7	10.4	1.5	chr9	75103361	75103565	(63291152)	C	L1ME4a	LINE/L1	(4)	6120	5941	4090547
922	24.0	0.5	4.3	chr9	76667755	76667985	(61726732)	C	MER58A	DNA/hAT-Charlie	(2)	222	1	4092979
352	19.0	1.2	1.2	chr9	81429338	81429417	(56965300)	C	MADE2	DNA/TcMar-Mariner	(0)	80	1	4099891
47	0.0	0.0	0.0	chr9	81429586	81429628	(56965089)	+	(TAGA)n	Simple_repeat	1	43	(0)	4099892
23	0.0	0.0	0.0	chr9	81429629	81429656	(56965061)	+	(GCAG)n	Simple_repeat	1	28	(0)	4099893
864	16.3	0.0	0.0	chr9	83738374	83738496	(54656221)	C	AluJo	SINE/Alu	(189)	123	1	4103407
1621	16.8	2.0	0.0	chr9	83738523	83738766	(54655951)	C	AluJb	SINE/Alu	(63)	249	1	4103408
3223	12.6	3.3	0.0	chr9	86537043	86537556	(51857161)	+	Tigger3b	DNA/TcMar-Tigger	1	532	(699)	4108041
2112	11.8	6.9	1.4	chr9	86537557	86537900	(51856817)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	4108042
1846	16.8	0.0	2.9	chr9	88367895	88368204	(50026513)	+	AluJb	SINE/Alu	3	303	(9)	4111027
2419	12.9	0.5	4.5	chr9	88368264	88368439	(50026278)	+	MER61E	LTR/ERV1	1	164	(405)	4111028
2510	7.4	0.3	0.7	chr9	88368440	88368749	(50025968)	+	AluY	SINE/Alu	1	309	(2)	4111029
768	12.6	3.6	5.6	chr9	92872855	92872997	(45521720)	+	L1MDa	LINE/L1	1810	1949	(4684)	4117345
1396	18.6	5.9	7.2	chr9	92872998	92873374	(45521343)	+	MLT1B	LTR/ERVL-MaLR	19	390	(0)	4117350
1939	16.5	1.4	2.0	chr9	92873375	92873732	(45520985)	+	L1MDa	LINE/L1	3741	4096	(2441)	4117345
1329	26.5	6.2	3.7	chr9	93443525	93444024	(44950693)	C	L1MEf	LINE/L1	(5575)	1065	483	4118181
2485	9.0	0.3	0.0	chr9	93444028	93444339	(44950378)	C	AluSp	SINE/Alu	(0)	313	1	4118182
1342	12.7	0.0	0.0	chr9	96560572	96560744	(41833973)	C	AluSg7	SINE/Alu	(0)	309	137	4123083
2041	11.5	0.0	0.8	chr9	96560938	96561198	(41833519)	C	AluSz	SINE/Alu	(15)	297	39	4123084
188	33.1	11.7	4.7	chr9	100714564	100714690	(37680027)	+	MIRc	SINE/MIR	62	198	(70)	4130612
156	10.7	3.8	5.8	chr9	101448749	101449113	(36945604)	+	GA-rich	Low_complexity	1	379	(0)	4131715
13	16.8	0.0	0.0	chr9	101449113	101449140	(36945577)	+	(AGGC)n	Simple_repeat	1	28	(0)	4131716
532	30.0	5.7	0.0	chr9	105452363	105452512	(32942205)	C	MIRb	SINE/MIR	(109)	159	1	4137586
37	12.2	1.3	2.6	chr9	105452597	105452669	(32942048)	+	(CCTG)n	Simple_repeat	1	72	(0)	4137587
61	2.9	1.3	2.6	chr9	105452670	105452745	(32941972)	+	(CCTT)n	Simple_repeat	1	77	(0)	4137588
1550	19.8	6.2	0.7	chr9	105452749	105453036	(32941681)	C	AluJb	SINE/Alu	(7)	305	1	4137589
33	0.0	0.0	0.0	chr9	109745488	109745515	(28649202)	+	(GT)n	Simple_repeat	1	28	(0)	4145043
354	26.4	18.9	1.1	chr9	109880103	109880362	(28514355)	+	L1MC5a	LINE/L1	2451	2767	(10)	4145272
2118	10.7	0.4	0.0	chr9	110892385	110892654	(27502063)	+	AluSg	SINE/Alu	1	271	(39)	4146962
89	16.1	3.1	4.3	chr9	110892655	110892881	(27501836)	+	GA-rich	Low_complexity	1	234	(0)	4146963
444	26.3	12.6	0.0	chr9	110892907	110893058	(27501659)	+	LTR79	LTR/ERVL	260	433	(94)	4146964
579	26.9	6.6	2.2	chr9	110893127	110893358	(27501359)	+	L1ME4b	LINE/L1	263	505	(387)	4146965
1293	17.6	6.8	5.6	chr9	112198488	112198807	(26195910)	C	MER33	DNA/hAT-Charlie	(0)	324	1	4149358
531	30.0	7.7	9.7	chr9	112198892	112199003	(26195714)	+	L2c	LINE/L2	2916	3020	(355)	4149359
2352	10.4	0.3	0.0	chr9	112199004	112199311	(26195406)	C	AluSz	SINE/Alu	(3)	309	1	4149360
2082	14.8	0.7	2.9	chr9	120720085	120720394	(17674323)	+	AluJb	SINE/Alu	1	303	(9)	4165564
851	24.6	14.6	8.8	chr9	120720395	120720569	(17674148)	+	L1ME4a	LINE/L1	5652	5826	(298)	4165562
611	7.2	0.0	0.0	chr9	121520505	121520587	(16874130)	C	MER61E	LTR/ERV1	(486)	83	1	4167152
7330	15.9	1.3	5.8	chr9	121520592	121521367	(16873350)	C	LTR25-int	LTR/ERV1	(2)	7186	6480	4167152
220	36.9	4.4	0.8	chr9	121641452	121641582	(16753135)	C	MIR3	SINE/MIR	(4)	204	69	4167433
14	9.1	0.0	0.0	chr9	121641583	121641606	(16753111)	+	(TTCA)n	Simple_repeat	1	24	(0)	4167434
34	0.0	0.0	0.0	chr9	121641766	121641797	(16752920)	+	(GCCT)n	Simple_repeat	1	32	(0)	4167435
434	34.9	5.7	2.5	chr9	121641801	121642087	(16752630)	C	L1MC4	LINE/L1	(4986)	1229	942	4167436
37	0.0	0.0	0.0	chr9	122396684	122396717	(15998000)	+	(AAT)n	Simple_repeat	1	34	(0)	4168974
350	12.2	0.0	0.0	chr9	122396718	122396766	(15997951)	+	MLT2C1	LTR/ERVL	511	559	(0)	4168970
1337	28.8	8.9	1.6	chr9	122396776	122397263	(15997454)	C	MLT1N2	LTR/ERVL-MaLR	(4)	558	32	4168975
2349	14.7	1.0	3.1	chr9	122537704	122538138	(15856579)	C	MER61E	LTR/ERV1	(0)	728	112	4169143
773	5.9	0.0	3.3	chr9	122538162	122538283	(15856434)	C	MER61E	LTR/ERV1	(451)	118	1	4169143
2271	14.1	0.2	1.7	chr9	122538284	122538701	(15856016)	C	L1P4	LINE/L1	(1653)	4493	4082	4169144
17	5.0	0.0	0.0	chr9	124725393	124725413	(13669304)	+	(A)n	Simple_repeat	1	21	(0)	4173112
688	12.0	1.8	0.9	chr9	124725665	124725773	(13668944)	+	AluJb	SINE/Alu	9	118	(194)	4173113
2306	8.1	0.0	2.9	chr9	125199139	125199446	(13195271)	C	AluSg	SINE/Alu	(11)	299	1	4174122
304	26.6	4.9	12.5	chr9	125199447	125199514	(13195203)	C	MIRb	SINE/MIR	(101)	167	104	4174121
2266	10.6	0.0	1.0	chr9	125283873	125284175	(13110542)	C	AluSz	SINE/Alu	(12)	300	1	4174352
2128	12.2	2.0	0.3	chr9	125284181	125284476	(13110241)	C	AluSx3	SINE/Alu	(9)	302	2	4174353
1448	22.5	6.0	3.1	chr9	126272651	126273068	(12121649)	C	HAL1	LINE/L1	(710)	1797	1367	4176156
41	14.3	0.0	0.0	chr9	126273083	126273152	(12121565)	+	(CCTG)n	Simple_repeat	1	70	(0)	4176157
1889	17.2	0.7	0.3	chr9	126273153	126273448	(12121269)	C	AluJb	SINE/Alu	(15)	297	1	4176158
348	30.0	7.9	10.7	chr9	127288002	127288393	(11106324)	C	L2b	LINE/L2	(16)	3359	2980	4177937
284	30.6	1.4	6.8	chr9	127288418	127288564	(11106153)	C	L2b	LINE/L2	(619)	2800	2662	4177937
582	23.5	12.2	3.2	chr9	127770841	127771025	(10623692)	+	MIR	SINE/MIR	3	206	(62)	4178978
23	8.6	0.0	2.5	chr9	127771613	127771652	(10623065)	+	(CCGCC)n	Simple_repeat	1	40	(0)	4178979
2196	9.8	1.0	0.3	chr9	130062133	130062418	(8332299)	+	AluSq2	SINE/Alu	1	288	(25)	4184228
43	0.0	0.0	0.0	chr9	130062421	130062459	(8332258)	+	(ATA)n	Simple_repeat	1	39	(0)	4184229
331	21.4	8.1	0.0	chr9	130062491	130062561	(8332156)	C	L2c	LINE/L2	(1)	3386	3284	4184230
64	12.8	0.0	0.0	chr9	130062600	130062702	(8332015)	+	(GCCT)n	Simple_repeat	1	103	(0)	4184231
21	27.4	0.0	0.0	chr9	130062661	130062721	(8331996)	+	(CCGT)n	Simple_repeat	1	61	(0)	4184232
1430	16.7	0.0	4.5	chr9	130062722	130062985	(8331732)	C	AluJr	SINE/Alu	(16)	296	45	4184233
59	18.8	0.6	5.1	chr9	130138405	130138560	(8256157)	+	(CCCTCC)n	Simple_repeat	1	157	(0)	4184390
46	21.8	4.4	4.8	chr9	130138561	130138583	(8256134)	+	(TCCTCT)n	Simple_repeat	2	188	(0)	4184391
28	0.0	0.0	0.0	chr9	130493749	130493775	(7900942)	+	(GCCT)n	Simple_repeat	1	27	(0)	4185120
198	25.8	4.1	2.1	chr9	130662095	130662189	(7732528)	C	MIR3	SINE/MIR	(31)	177	81	4185535
16	0.0	4.3	0.0	chr9	131403286	131403308	(6991409)	+	(GTTT)n	Simple_repeat	1	24	(0)	4187033
2130	13.7	0.3	1.3	chr9	131403341	131403654	(6991063)	C	AluSx	SINE/Alu	(1)	311	1	4187034
271	25.0	10.1	0.0	chr9	136800639	136800754	(1593963)	+	MamTip1	DNA/hAT-Tip100	67	195	(72)	4194822
1817	17.8	4.7	0.3	chrX	22057322	22057608	(133983287)	+	AluSz	SINE/Alu	1	300	(12)	4395419
441	28.9	7.9	8.9	chrX	22057609	22057850	(133983045)	+	L2a	LINE/L2	3189	3425	(1)	4395418
359	18.2	6.1	0.0	chrX	22058203	22058286	(133982609)	+	MIRc	SINE/MIR	67	155	(53)	4395420
1088	25.1	13.9	4.2	chrX	39669990	39670196	(116370699)	C	LTR16E1	LTR/ERVL	(0)	538	305	4420950
15	8.5	0.0	0.0	chrX	39954029	39954053	(116086842)	+	(GGCA)n	Simple_repeat	1	25	(0)	4421512
405	30.5	6.7	4.3	chrX	39954319	39954479	(116086416)	+	MIR3	SINE/MIR	22	186	(22)	4421513
411	33.2	3.8	6.2	chrX	41365630	41365953	(114674942)	+	L2c	LINE/L2	2539	2854	(565)	4424215
2312	9.5	0.3	0.0	chrX	41365999	41366293	(114674602)	C	AluSx	SINE/Alu	(16)	296	1	4424216
876	16.5	0.0	0.0	chrX	44432837	44432963	(111607932)	+	AluJo	SINE/Alu	1	127	(185)	4428852
13	15.5	0.0	3.2	chrX	47229194	47229224	(108811671)	+	(CTGC)n	Simple_repeat	1	31	(0)	4433630
18	33.3	0.0	0.0	chrX	47229240	47229307	(108811588)	+	(TTTT)n	Simple_repeat	1	68	(0)	4433631
57236	9.2	1.4	0.9	chrX	47285909	47293583	(108747312)	C	HERVFH19-int	LTR/ERV1	(3)	7716	1	4433765
227	26.6	0.0	4.1	chrX	48736940	48737037	(107303858)	+	Charlie9	DNA/hAT-Charlie	21	114	(2643)	4436720
399	25.4	5.6	0.7	chrX	52261156	52261290	(103779605)	+	L1ME4a	LINE/L1	5971	6112	(12)	4441646
3790	13.0	1.8	0.2	chrX	63404074	63404629	(92636266)	C	MER61E	LTR/ERV1	(4)	565	1	4450136
4757	24.4	1.9	2.0	chrX	63404630	63405448	(92635447)	C	L1MB3	LINE/L1	(3152)	3161	2349	4450123
184	16.1	0.0	0.0	chrX	68987905	68987935	(87052960)	C	L2a	LINE/L2	(16)	3371	3341	4457341
18	24.2	2.4	5.9	chrX	68988183	68988265	(87052630)	+	GA-rich	Low_complexity	1	85	(0)	4457349
3401	21.0	5.9	2.3	chrX	72036147	72037137	(84003758)	C	L1MEf	LINE/L1	(4627)	2006	980	4462572
2446	7.5	0.0	1.3	chrX	72037138	72037442	(84003453)	+	AluY	SINE/Alu	1	301	(10)	4462576
365	27.2	14.4	3.9	chrX	73943786	73943965	(82096930)	+	MIRc	SINE/MIR	25	226	(42)	4464969
15	21.4	4.4	0.0	chrX	73944061	73944105	(82096790)	+	A-rich	Low_complexity	1	47	(0)	4464970
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
1551	19.9	4.5	2.6	chrX	80148407	80148781	(75892114)	C	LTR25	LTR/ERV1	(0)	844	468	4471513
236	22.2	12.5	0.0	chrX	80148753	80148815	(75892080)	C	MER51A	LTR/ERV1	(354)	280	209	4471514
368	21.8	0.0	8.2	chrX	80148977	80149086	(75891809)	C	MER61E	LTR/ERV1	(468)	101	1	4471515
7243	8.0	1.1	0.1	chrX	80149170	80150169	(75890726)	C	L1PB	LINE/L1	(1177)	4969	3960	4471516
2039	15.7	19.4	0.0	chrX	86012350	86012756	(70028139)	+	MER84	LTR/ERV1	3	507	(0)	4477600
1209	24.8	12.6	4.2	chrX	86012759	86012785	(70028110)	+	L1MEd	LINE/L1	806	831	(6272)	4477597
2695	16.2	19.6	1.0	chrX	86012786	86013408	(70027487)	+	LTR27C	LTR/ERV1	1	767	(0)	4477601
22	37.1	1.5	1.4	chrX	93673381	93673517	(62367378)	+	(GGCGGA)n	Simple_repeat	1	139	(0)	4485919
12	27.4	1.8	3.5	chrX	103252656	103252711	(52788184)	+	(GCA)n	Simple_repeat	1	57	(0)	4498357
20	7.0	0.0	0.0	chrX	105701605	105701634	(50339261)	+	(CCTG)n	Simple_repeat	1	30	(0)	4501922
17	9.1	7.7	5.4	chrX	105701782	105701833	(50339062)	+	(TTG)n	Simple_repeat	1	56	(0)	4501923
881	15.7	0.0	0.7	chrX	106402218	106402365	(49638530)	C	MER50	LTR/ERV1	(130)	604	458	4502684
244	17.6	5.5	0.0	chrX	106693217	106693267	(49347628)	C	L2a	LINE/L2	(2)	3424	3371	4503042
46	0.0	0.0	0.0	chrX	106693362	106693400	(49347495)	+	(AC)n	Simple_repeat	1	39	(0)	4503043
24	5.8	2.6	2.6	chrX	106693401	106693438	(49347457)	+	(GA)n	Simple_repeat	1	39	(0)	4503044
501	24.3	10.3	0.0	chrX	107676178	107676287	(48364608)	C	MER5A1	DNA/hAT-Charlie	(53)	113	3	4504622
946	19.6	0.0	0.0	chrX	107676300	107676472	(48364423)	C	MER5B	DNA/hAT-Charlie	(3)	175	3	4504624
14	18.9	0.0	2.6	chrX	107676473	107676510	(48364385)	+	(CCCCTTT)n	Simple_repeat	1	38	(0)	4504625
1542	23.2	4.0	0.3	chrX	108812249	108812611	(47228284)	+	L1MD1	LINE/L1	852	1228	(5312)	4506245
1521	19.6	0.7	1.8	chrX	110123831	110124111	(45916784)	+	AluJr4	SINE/Alu	2	279	(33)	4507967
83	15.6	0.7	0.0	chrX	110124122	110124270	(45916625)	+	GA-rich	Low_complexity	1	150	(0)	4507968
15	31.9	2.7	1.3	chrX	112840662	112840736	(43200159)	+	GA-rich	Low_complexity	1	77	(0)	4511970
634	14.0	2.6	0.9	chrX	115322155	115322269	(40718626)	C	MER34C_	LTR/ERV1	(0)	585	469	4515284
999	16.5	0.0	11.7	chrX	115322270	115322395	(40718500)	C	Tigger1	DNA/TcMar-Tigger	(0)	2418	2312	4515285
3860	12.7	1.4	0.2	chrX	115322396	115322953	(40717942)	+	MER61E	LTR/ERV1	1	565	(4)	4515286
1778	14.8	1.0	7.4	chrX	117929661	117929970	(38110925)	+	AluJo	SINE/Alu	2	291	(21)	4518321
5422	24.2	6.9	2.8	chrX	117929971	117930143	(38110752)	+	L1M5	LINE/L1	3969	4191	(1955)	4518320
83	9.6	4.0	1.9	chrX	117930150	117930301	(38110594)	+	GA-rich	Low_complexity	1	158	(0)	4518322
527	26.6	2.5	1.0	chrX	117930304	117930527	(38110368)	+	L1MEc	LINE/L1	4313	4544	(1775)	4518317
2669	4.0	0.0	0.3	chrX	118532499	118532801	(37508094)	+	AluY	SINE/Alu	1	302	(9)	4519425
1002	7.0	0.8	0.0	chrX	119753660	119753788	(36287107)	+	FLAM_C	SINE/Alu	2	131	(12)	4521751
876	15.5	6.2	3.7	chrX	120603510	120603697	(35437198)	C	MER53	DNA/hAT	(0)	193	1	4523254
2543	7.3	2.9	0.0	chrX	131753507	131753831	(24287064)	+	AluSp	SINE/Alu	1	313	(0)	4538439
497	27.0	3.5	4.4	chrX	132121246	132121399	(23919496)	+	MIR	SINE/MIR	28	187	(21)	4538935
16	26.9	0.0	0.0	chrX	133246994	133247033	(22793862)	+	(GT)n	Simple_repeat	1	40	(0)	4540606
3554	14.0	0.4	1.5	chrX	133247084	133247620	(22793275)	+	MER61E	LTR/ERV1	1	531	(38)	4540607
1905	12.1	3.1	1.4	chrX	133266974	133267102	(22773793)	C	AluSx1	SINE/Alu	(176)	136	1	4540646
27	3.5	0.0	0.0	chrX	133267284	133267313	(22773582)	+	(TGCC)n	Simple_repeat	1	30	(0)	4540648
1719	16.3	0.9	0.9	chrX	133267482	133267803	(22773092)	+	MER33	DNA/hAT-Charlie	3	324	(0)	4540649
2480	9.2	0.3	0.0	chrX	134765957	134766249	(21274646)	C	AluSx	SINE/Alu	(18)	294	1	4543340
208	20.7	13.2	1.0	chrX	134766250	134766321	(21274574)	+	L2a	LINE/L2	3308	3426	(0)	4543338
2809	21.4	9.8	3.0	chrX	134766484	134767366	(21273529)	+	L1MC4	LINE/L1	6427	7419	(623)	4543341
17	3.9	3.7	0.0	chrX	135520841	135520867	(20520028)	+	(GTCCC)n	Simple_repeat	1	28	(0)	4544492
1962	20.1	5.3	1.4	chrX	140560585	140560999	(15479896)	C	LTR25	LTR/ERV1	(0)	844	413	4552432
246	22.2	12.5	0.0	chrX	140560971	140561033	(15479862)	C	MER51A	LTR/ERV1	(354)	280	209	4552433
534	17.7	5.5	1.9	chrX	140561133	140561288	(15479607)	C	MER61E	LTR/ERV1	(432)	162	1	4552434
6763	19.1	1.6	5.5	chrX	140561289	140561744	(15479151)	C	L1MA4A	LINE/L1	(1501)	4645	4197	4552431
475	28.2	4.7	5.2	chrX	150696544	150696734	(5344161)	C	MLT1K	LTR/ERVL-MaLR	(3)	592	403	4566323
252	20.8	2.7	0.0	chrX	150696950	150697021	(5343874)	C	MLT1K	LTR/ERVL-MaLR	(499)	96	23	4566323
1687	21.1	6.6	0.0	chrX	152866069	152866409	(3174486)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	4569516
1596	23.7	5.8	0.5	chrX	152866431	152866867	(3174028)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	6	4569517
2579	34.7	2.3	1.8	chrX	153056997	153058067	(2982828)	+	MamGyp-int	LTR/Gypsy	46	1122	(3981)	4569791
19	12.2	2.8	0.0	chrX	153724921	153724956	(2315939)	+	GA-rich	Low_complexity	1	37	(0)	4570655
14	21.9	0.0	4.3	chrX	153725197	153725242	(2315653)	+	(CCAGCC)n	Simple_repeat	1	46	(0)	4570656
12	21.0	2.5	2.4	chrX	153726283	153726322	(2314573)	+	G-rich	Low_complexity	1	41	(0)	4570657
13	0.0	0.0	0.0	chrX	154490487	154490503	(1550392)	+	(GCG)n	Simple_repeat	1	17	(0)	4571926
19	24.3	1.7	1.6	chrX	154490668	154490727	(1550168)	+	(GCCCC)n	Simple_repeat	1	61	(0)	4571927
15	8.5	0.0	0.0	chrX	154535395	154535419	(1505476)	+	(ACAG)n	Simple_repeat	1	25	(0)	4572024
12	26.2	1.5	6.0	chrX	154546877	154546942	(1493953)	+	(GGCGG)n	Simple_repeat	1	67	(0)	4572046
297	24.6	0.0	0.0	chrY	10627178	10627242	(46600173)	C	AluJo	SINE/Alu	(20)	292	228	4587825
890	21.9	0.8	0.9	chrY	10627274	10627798	(46599617)	+	(CCATT)n	Simple_repeat	3	528	(0)	4587826
333	21.9	3.0	0.0	chrY	10663511	10663574	(46563841)	C	AluYj4	SINE/Alu	(22)	289	224	4587921
6112	24.5	0.6	0.4	chrY	10939178	10940587	(46286828)	+	(TTCCA)n	Simple_repeat	5	1415	(0)	4588487
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
632	25.3	2.2	1.7	chrY	11282071	11282251	(45945164)	C	MER5A	DNA/hAT-Charlie	(0)	189	8	4589058
1081	32.1	12.4	1.6	chrY	11282268	11282912	(45944503)	+	L2	LINE/L2	916	1640	(1779)	4589056