420	28.5	10.6	1.5	chr1	905266	905461	(248050961)	+	L1MB5	LINE/L1	5451	5666	(512)	1160
17	18.9	4.0	1.9	chr1	941911	941960	(248014462)	+	(CCG)n	Simple_repeat	1	52	(0)	1190
2198	11.0	0.7	1.3	chr1	1016061	1016360	(247940062)	C	AluSx1	SINE/Alu	(14)	298	1	1282
1063	10.4	0.0	0.0	chr1	1016361	1016495	(247939927)	C	AluSz	SINE/Alu	(176)	136	2	1283
16	16.7	2.4	2.3	chr1	1116461	1116502	(247839920)	+	(AGGCGG)n	Simple_repeat	1	43	(0)	1383
14	17.5	0.0	2.9	chr1	1232284	1232317	(247724105)	+	(GCG)n	Simple_repeat	1	34	(0)	1498
15	15.0	7.3	3.4	chr1	1616209	1616263	(247340159)	+	(CCGTGC)n	Simple_repeat	1	59	(0)	2067
2280	8.5	0.0	0.0	chr1	2098649	2098980	(246857442)	C	AluY	SINE/Alu	(0)	311	1	2872
469	32.0	12.8	3.7	chr1	2582327	2582729	(246373693)	C	MER65A	LTR/ERV1	(0)	445	1	3357
1416	18.0	0.9	5.2	chr1	2582751	2582875	(246373547)	+	MLT1A0	LTR/ERVL-MaLR	17	129	(236)	3358
1025	16.2	18.9	9.8	chr1	4014850	4015100	(244941322)	C	MLT1A1	LTR/ERVL-MaLR	(12)	396	77	4716
1871	18.4	0.3	1.0	chr1	4015101	4015404	(244941018)	C	AluSx	SINE/Alu	(10)	302	1	4717
64	6.2	1.1	1.1	chr1	4302984	4303071	(244653351)	+	(GTTCC)n	Simple_repeat	1	89	(0)	5122
140	18.5	0.7	0.0	chr1	4303072	4303312	(244653110)	+	(TTCCA)n	Simple_repeat	2	242	(0)	5123
470	17.9	1.6	8.2	chr1	5445222	5445355	(243511067)	C	L1MB1	LINE/L1	(0)	6168	6044	6757
754	23.2	9.1	1.4	chr1	5445372	5445665	(243510757)	C	MLT1A1	LTR/ERVL-MaLR	(52)	313	1	6758
947	22.8	6.0	8.4	chr1	5554873	5555139	(243401283)	C	MLT1D	LTR/ERVL-MaLR	(169)	336	80	6904
2793	18.6	1.4	1.9	chr1	5555140	5555654	(243400768)	C	MLT2B2	LTR/ERVL	(3)	512	1	6905
2223	16.2	1.3	5.1	chr1	5656549	5656958	(243299464)	+	MSTD	LTR/ERVL-MaLR	1	394	(2)	7052
465	30.3	6.2	1.9	chr1	6145670	6145824	(242810598)	+	MIR	SINE/MIR	11	172	(90)	7733
2142	8.7	2.3	2.0	chr1	6702134	6702431	(242253991)	C	AluSx	SINE/Alu	(13)	299	1	8707
1589	18.5	6.2	6.2	chr1	7998671	7998867	(240957555)	C	MSTD	LTR/ERVL-MaLR	(0)	396	213	10737
2256	12.3	0.0	0.0	chr1	7998868	7999168	(240957254)	+	AluSx1	SINE/Alu	1	301	(11)	10738
1052	23.6	0.0	2.0	chr1	9029013	9029258	(239927164)	C	MLT1D-int	LTR/ERVL-MaLR	(1130)	241	1	12784
734	16.9	0.0	0.0	chr1	9029261	9029396	(239927026)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	370	12784
949	15.9	1.9	0.0	chr1	9029392	9029548	(239926874)	+	MSTD	LTR/ERVL-MaLR	237	396	(0)	12785
1075	16.6	28.9	0.3	chr1	9437240	9437530	(239518892)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	13589
423	22.1	7.2	4.8	chr1	9437545	9437698	(239518724)	C	MIR	SINE/MIR	(15)	247	89	13590
2011	19.9	4.8	2.1	chr1	14264365	14264749	(234691673)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	22867
454	23.1	10.9	3.9	chr1	15362968	15363020	(233593402)	+	MIRb	SINE/MIR	1	64	(204)	25093
2368	15.1	3.5	0.0	chr1	15363021	15363430	(233592992)	C	MSTC	LTR/ERVL-MaLR	(3)	425	1	25094
2131	13.5	10.1	2.7	chr1	16233800	16234117	(232722305)	+	MSTD	LTR/ERVL-MaLR	1	354	(42)	26992
2255	10.2	0.7	1.3	chr1	16234118	16234422	(232722000)	+	AluSx1	SINE/Alu	1	303	(9)	26993
32	11.8	2.9	2.9	chr1	16499333	16499400	(232457022)	+	(GGCCGG)n	Simple_repeat	1	70	(0)	27637
290	25.0	0.0	0.0	chr1	16676976	16677043	(232279379)	C	tRNA-His-CAY_	tRNA	(3)	72	5	27933
2650	12.2	0.2	6.6	chr1	17139944	17140400	(231816022)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	28770
1364	19.8	18.2	2.7	chr1	18129716	18130048	(230826374)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	30994
210	28.5	11.7	6.5	chr1	18130049	18130170	(230826252)	C	MIRb	SINE/MIR	(133)	135	3	30993
308	38.0	8.0	0.5	chr1	18373713	18373921	(230582501)	+	MIR	SINE/MIR	31	256	(6)	31501
302	29.0	16.0	0.0	chr1	18374235	18374365	(230582057)	+	MIRb	SINE/MIR	104	259	(9)	31502
1627	20.6	7.8	1.4	chr1	20245415	20245784	(228710638)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	35355
1968	13.9	14.9	1.2	chr1	20469444	20469784	(228486638)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	35848
29	25.9	2.4	4.0	chr1	20787240	20787362	(228169060)	+	(CGCCGC)n	Simple_repeat	1	126	(0)	36557
1684	16.3	16.6	0.6	chr1	22161673	22162012	(226794410)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	4	39531
323	28.3	20.7	1.1	chr1	22162030	22162211	(226794211)	C	MIRb	SINE/MIR	(14)	254	28	39532
1037	23.2	13.1	7.3	chr1	23847418	23847740	(225108682)	+	MSTD	LTR/ERVL-MaLR	1	357	(39)	43506
2244	11.8	0.7	0.0	chr1	23847741	23848046	(225108376)	+	AluSx1	SINE/Alu	2	309	(3)	43507
23	16.5	3.7	0.0	chr1	24502737	24502790	(224453632)	+	(CCCCCG)n	Simple_repeat	1	56	(0)	45043
475	24.4	6.9	10.7	chr1	24603657	24603858	(224352564)	+	L1MC4	LINE/L1	7780	7975	(67)	45283
1443	21.9	10.1	1.1	chr1	24603859	24604218	(224352204)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	45284
475	24.4	6.9	10.7	chr1	24604219	24604286	(224352136)	+	L1MC4	LINE/L1	7976	8039	(3)	45283
2365	15.4	0.8	0.3	chr1	24877733	24878122	(224078300)	C	L1MC1	LINE/L1	(17)	6316	5925	45930
1612	21.7	5.3	4.4	chr1	24878125	24878420	(224078002)	C	MSTD	LTR/ERVL-MaLR	(2)	394	88	45931
280	8.3	0.0	0.0	chr1	24880516	24880551	(224075871)	C	MSTD	LTR/ERVL-MaLR	(17)	379	344	45931
28	13.2	9.1	0.0	chr1	24880556	24880621	(224075801)	+	(TA)n	Simple_repeat	1	72	(0)	45933
1309	22.9	5.9	1.0	chr1	24880629	24880936	(224075486)	C	MSTD	LTR/ERVL-MaLR	(72)	324	1	45931
474	20.3	5.4	1.6	chr1	25378896	25379020	(223577402)	+	L1ME3B	LINE/L1	5797	5926	(316)	47008
1187	23.4	10.6	3.3	chr1	25379021	25379386	(223577036)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	47011
3599	23.6	11.8	5.7	chr1	25379387	25379451	(223576971)	C	MSTD-int	LTR/ERVL-MaLR	(0)	1735	1690	47011
53	0.0	0.0	0.0	chr1	25379452	25379496	(223576926)	+	(TA)n	Simple_repeat	1	45	(0)	47012
1090	17.1	18.5	4.2	chr1	25381905	25382263	(223574159)	C	MSTD	LTR/ERVL-MaLR	(2)	426	5	47011
1399	21.6	15.9	1.5	chr1	25790828	25790990	(223165432)	+	MSTD	LTR/ERVL-MaLR	1	208	(188)	47837
28	0.0	0.0	0.0	chr1	25790991	25791017	(223165405)	+	(GCTT)n	Simple_repeat	1	27	(0)	47838
1399	21.6	15.9	1.5	chr1	25791018	25791191	(223165231)	+	MSTD	LTR/ERVL-MaLR	209	395	(1)	47837
1345	25.9	8.1	5.7	chr1	27652137	27652553	(221303869)	C	L1ME4b	LINE/L1	(274)	618	192	52222
1929	21.3	2.8	1.5	chr1	27652554	27652944	(221303478)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	52223
1345	26.0	8.2	5.8	chr1	27652945	27653065	(221303357)	C	L1ME4b	LINE/L1	(701)	191	77	52222
16	17.4	0.0	0.0	chr1	27773082	27773115	(221183307)	+	(CAGCCC)n	Simple_repeat	1	34	(0)	52509
1392	22.2	3.8	3.8	chr1	27860708	27860898	(221095524)	+	MER90a	LTR/ERV1	414	614	(0)	52688
713	22.5	10.4	10.1	chr1	27860901	27861207	(221095215)	+	L2a	LINE/L2	3119	3426	(0)	52687
262	29.2	6.2	2.4	chr1	27861214	27861336	(221095086)	C	L2b	LINE/L2	(172)	3203	3076	52692
745	31.7	8.7	3.6	chr1	28162978	28163390	(220793032)	+	L2c	LINE/L2	2913	3348	(39)	53418
582	25.6	10.6	5.0	chr1	28163471	28163692	(220792730)	+	MIRb	SINE/MIR	1	236	(32)	53419
245	16.3	0.0	0.0	chr1	29551261	29551303	(219405119)	+	L2b	LINE/L2	3298	3340	(35)	56836
494	24.5	11.6	2.6	chr1	29736413	29736593	(219219829)	C	MIR3	SINE/MIR	(10)	198	3	57193
1858	22.5	0.8	2.5	chr1	29912338	29912733	(219043689)	+	MSTD	LTR/ERVL-MaLR	8	396	(0)	57495
2370	14.0	10.8	0.0	chr1	30554041	30554419	(218402003)	C	MSTC	LTR/ERVL-MaLR	(3)	425	1	58621
489	29.6	6.3	1.8	chr1	31066099	31066276	(217890146)	+	MIRb	SINE/MIR	24	216	(52)	59680
203	31.5	10.5	0.0	chr1	31155650	31155760	(217800662)	+	MIRc	SINE/MIR	93	216	(52)	59977
1000	17.4	9.2	11.7	chr1	31155805	31156129	(217800293)	+	LTR54	LTR/ERV1	2	317	(193)	59978
1649	17.1	1.0	4.5	chr1	31874678	31874986	(217081436)	+	AluJb	SINE/Alu	7	304	(8)	61528
284	25.7	2.8	13.6	chr1	31874987	31875029	(217081393)	+	L1MEd	LINE/L1	3135	3166	(3840)	61523
1403	22.2	7.0	5.0	chr1	31875031	31875409	(217081013)	C	MSTD	LTR/ERVL-MaLR	(9)	387	1	61529
29	7.9	0.0	0.0	chr1	31938062	31938102	(217018320)	+	(CGG)n	Simple_repeat	1	41	(0)	61649
13	20.9	4.3	2.1	chr1	31938121	31938144	(217018278)	+	(CGGCG)n	Simple_repeat	1	46	(0)	61650
16	0.0	0.0	0.0	chr1	31938145	31938164	(217018258)	+	(CGG)n	Simple_repeat	1	20	(0)	61651
35	29.8	3.9	3.8	chr1	31938185	31938388	(217018034)	+	(GCC)n	Simple_repeat	1	212	(0)	61652
15	14.7	0.0	0.0	chr1	31938446	31938475	(217017947)	+	(GCTG)n	Simple_repeat	1	30	(0)	61653
12	24.8	0.0	0.0	chr1	32500698	32500731	(216455691)	+	(CCGG)n	Simple_repeat	1	34	(0)	62990
931	25.8	4.5	3.9	chr1	32500964	32501270	(216455152)	C	L1MC4	LINE/L1	(494)	7548	7240	62991
971	17.6	0.0	0.0	chr1	32501281	32501428	(216454994)	C	AluJb	SINE/Alu	(19)	293	146	62992
363	18.6	0.0	0.4	chr1	32501430	32501509	(216454913)	C	FLAM_C	SINE/Alu	(80)	53	1	62993
480	17.1	10.6	4.1	chr1	32501525	32501647	(216454775)	C	FLAM_A	SINE/Alu	(10)	132	1	62994
778	21.2	3.3	0.0	chr1	32660261	32660406	(216296016)	C	FRAM	SINE/Alu	(24)	152	2	63421
1569	13.3	2.6	2.6	chr1	32660408	32660677	(216295745)	C	AluSx1	SINE/Alu	(3)	309	40	63422
44	24.0	4.7	2.8	chr1	32964394	32964565	(215991857)	+	(CCGCGG)n	Simple_repeat	1	180	(0)	64113
24	25.4	3.8	0.0	chr1	32964720	32964798	(215991624)	+	(CGC)n	Simple_repeat	1	82	(0)	64114
654	23.7	9.4	7.8	chr1	33037181	33037469	(215918953)	+	L1M5	LINE/L1	5514	5802	(360)	64298
2168	10.9	0.3	0.0	chr1	33037556	33037838	(215918584)	+	AluSq2	SINE/Alu	1	284	(29)	64299
258	20.2	21.9	1.1	chr1	33301366	33301455	(215654967)	C	MLT1K	LTR/ERVL-MaLR	(7)	588	475	64878
1725	16.1	9.1	7.5	chr1	33301596	33301798	(215654624)	C	MSTD	LTR/ERVL-MaLR	(0)	396	215	64879
1817	15.8	0.3	3.0	chr1	33301799	33302095	(215654327)	+	AluJb	SINE/Alu	1	289	(23)	64880
1756	16.9	11.6	3.3	chr1	34402339	34402700	(214553722)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	66740
6412	23.3	4.4	10.7	chr1	34402701	34404556	(214551866)	C	MSTD-int	LTR/ERVL-MaLR	(0)	1735	2	66740
2141	10.9	0.0	1.1	chr1	37732864	37733190	(211223232)	C	AluSx1	SINE/Alu	(0)	312	3	73318
381	29.4	2.9	1.9	chr1	39575537	39575640	(209380782)	C	MIR	SINE/MIR	(157)	111	7	76948
1766	15.9	8.7	2.1	chr1	39609192	39609577	(209346845)	+	MLT2C2	LTR/ERVL	1	414	(50)	77050
597	31.6	9.3	2.5	chr1	39609599	39610208	(209346214)	C	L2a	LINE/L2	(425)	2994	2339	77049
2322	8.3	0.0	0.0	chr1	39738240	39738528	(209217894)	C	AluSq2	SINE/Alu	(24)	289	1	77324
1092	18.1	7.7	7.4	chr1	39738529	39738618	(209217804)	C	MER58B	DNA/hAT-Charlie	(218)	123	39	77323
1307	15.8	18.7	2.2	chr1	39978481	39978835	(208977587)	+	MSTC	LTR/ERVL-MaLR	2	428	(0)	77833
445	29.7	10.2	6.0	chr1	40372939	40373239	(208583183)	+	LTR85c	LTR/Gypsy?	356	670	(153)	78692
503	17.4	0.0	1.0	chr1	40373376	40373474	(208582948)	+	MIR	SINE/MIR	164	261	(1)	78693
12	24.3	0.0	8.1	chr1	40373475	40373536	(208582886)	+	(CTTC)n	Simple_repeat	1	62	(0)	78694
388	28.6	6.8	1.4	chr1	42816685	42816893	(206139529)	+	MIRc	SINE/MIR	2	222	(46)	83211
21	13.0	0.0	4.3	chr1	42817424	42817469	(206138953)	+	G-rich	Low_complexity	1	46	(0)	83212
234	28.8	1.5	0.0	chr1	43836435	43836500	(205119922)	C	L2b	LINE/L2	(20)	3355	3289	85014
309	27.9	9.2	0.1	chr1	43836825	43836942	(205119480)	C	MIR3	SINE/MIR	(99)	169	40	85015
713	28.8	6.6	6.9	chr1	43837049	43837354	(205119068)	C	L2c	LINE/L2	(28)	3359	3055	85016
348	31.6	6.9	8.2	chr1	47333318	47333668	(201622754)	+	L2a	LINE/L2	2989	3336	(39)	91367
19	12.1	0.0	2.6	chr1	47333870	47333907	(201622515)	+	(CCCGC)n	Simple_repeat	1	38	(0)	91369
290	19.0	1.7	0.0	chr1	48028673	48028730	(200927692)	+	UCON78	DNA	326	384	(59)	92766
2150	31.0	8.6	7.0	chr1	48075275	48075503	(200880919)	C	LTR78	LTR/ERV1	(0)	1304	1068	92861
1933	14.6	12.9	0.3	chr1	48075504	48075847	(200880575)	C	MSTD	LTR/ERVL-MaLR	(2)	394	1	92862
2150	31.0	8.6	7.0	chr1	48075848	48076049	(200880373)	C	LTR78	LTR/ERV1	(237)	1067	902	92861
17	15.0	4.3	2.1	chr1	50978056	50978101	(197978321)	+	G-rich	Low_complexity	1	48	(0)	97722
2328	17.3	11.8	4.2	chr1	51622406	51622925	(197333497)	C	MLT1F1	LTR/ERVL-MaLR	(4)	565	1	99119
670	30.0	14.5	5.2	chr1	51622926	51623290	(197333132)	C	L2b	LINE/L2	(1192)	2227	1833	99115
2450	6.4	0.0	0.3	chr1	52686451	52686747	(196269675)	C	AluY	SINE/Alu	(15)	296	1	101461
2451	10.9	6.1	1.5	chr1	53599171	53599578	(195356844)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	103383
957	22.5	15.9	3.2	chr1	53667600	53667911	(195288511)	C	MLT1A0	LTR/ERVL-MaLR	(6)	359	1	103512
207	37.4	1.6	0.0	chr1	53667917	53668039	(195288383)	+	L2b	LINE/L2	2847	2971	(448)	103513
1609	18.9	10.4	0.3	chr1	53783563	53783918	(195172504)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	103753
2150	6.8	0.0	0.4	chr1	54394696	54395001	(194561421)	C	AluY	SINE/Alu	(0)	311	2	104983
345	28.3	4.0	0.8	chr1	55231781	55231901	(193724521)	C	MIR3	SINE/MIR	(22)	186	62	106676
196	34.9	7.7	0.0	chr1	57213874	57214004	(191742418)	C	L2b	LINE/L2	(0)	3387	3243	110365
1652	15.0	20.1	0.6	chr1	57214047	57214374	(191742048)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	110366
14	5.8	10.5	2.4	chr1	58816594	58816631	(190139791)	+	(CAGTCCT)n	Simple_repeat	1	42	(0)	113581
3332	15.3	1.2	1.7	chr1	58816748	58817312	(190139110)	+	L1PA16	LINE/L1	5587	6154	(12)	113582
16	13.6	0.0	8.3	chr1	59926809	59926856	(189029566)	+	(CCCCG)n	Simple_repeat	1	48	(0)	115659
182	29.2	0.0	10.0	chr1	59926973	59927052	(189029370)	+	L2a	LINE/L2	3320	3391	(35)	115660
1850	19.1	3.5	1.0	chr1	60037334	60037719	(188918703)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	115871
1205	19.7	17.5	1.2	chr1	60578249	60578577	(188377845)	C	MSTD	LTR/ERVL-MaLR	(2)	394	1	116772
1705	16.6	1.3	5.4	chr1	61855400	61855713	(187100709)	C	AluJb	SINE/Alu	(11)	301	1	118979
1959	18.4	7.4	1.1	chr1	62100236	62100603	(186855819)	C	MSTD	LTR/ERVL-MaLR	(0)	396	4	119487
2624	5.8	0.3	0.0	chr1	62801678	62801985	(186154437)	+	AluY	SINE/Alu	1	309	(2)	120851
950	13.6	0.0	11.1	chr1	62801986	62801996	(186154426)	+	AluSx	SINE/Alu	303	312	(0)	120850
768	34.0	9.7	5.9	chr1	62802006	62802298	(186154124)	+	L2c	LINE/L2	2410	2735	(684)	120848
794	24.5	4.0	0.9	chr1	63900876	63901093	(185055329)	C	MIR	SINE/MIR	(1)	261	37	122914
17	17.4	2.5	0.0	chr1	64470366	64470405	(184486017)	+	(CGGCTC)n	Simple_repeat	1	41	(0)	123959
12	15.3	3.5	0.0	chr1	65066511	65066539	(183889883)	+	(CCCT)n	Simple_repeat	1	30	(0)	125012
23	15.3	0.0	5.4	chr1	65066726	65066781	(183889641)	+	(TCC)n	Simple_repeat	1	56	(0)	125013
12	16.8	0.0	0.0	chr1	65066925	65066951	(183889471)	+	(CCCCT)n	Simple_repeat	1	27	(0)	125014
1804	18.7	3.8	3.3	chr1	65192111	65192502	(183763920)	C	MSTD	LTR/ERVL-MaLR	(2)	394	1	125306
3023	0.6	0.0	0.0	chr1	65302520	65302834	(183653588)	C	AluYb8	SINE/Alu	(3)	315	1	125537
1468	19.9	7.6	6.9	chr1	65302835	65303030	(183653392)	+	MSTD	LTR/ERVL-MaLR	206	396	(0)	125536
16	20.4	6.8	1.6	chr1	66924885	66924943	(182031479)	+	GA-rich	Low_complexity	1	63	(0)	127976
21	22.9	0.0	0.0	chr1	66925047	66925094	(182031328)	+	(GGC)n	Simple_repeat	1	48	(0)	127977
291	22.0	4.4	0.0	chr1	66925695	66925791	(182030631)	+	MIR3	SINE/MIR	30	136	(94)	127978
1589	19.7	4.9	7.5	chr1	67273238	67273638	(181682784)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	128528
246	24.1	21.0	0.0	chr1	67319649	67319727	(181636695)	C	MIRb	SINE/MIR	(137)	131	32	128614
2246	16.4	0.0	1.4	chr1	67319728	67320097	(181636325)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	128623
18	22.1	2.1	0.0	chr1	67833185	67833232	(181123190)	+	(CTTC)n	Simple_repeat	1	49	(0)	129656
16	24.3	3.3	1.6	chr1	67833273	67833332	(181123090)	+	(CGCCG)n	Simple_repeat	1	62	(0)	129657
11	13.4	5.7	2.7	chr1	67833344	67833378	(181123044)	+	(CCGCCG)n	Simple_repeat	1	37	(0)	129658
19	6.8	3.2	0.0	chr1	67833416	67833446	(181122976)	+	(CCT)n	Simple_repeat	1	32	(0)	129659
8411	5.3	0.4	0.0	chr1	68057929	68058931	(180897491)	+	LTR13	LTR/ERVK	1	1007	(0)	130040
19	6.2	2.8	2.7	chr1	68497219	68497254	(180459168)	+	(GCTGG)n	Simple_repeat	1	37	(0)	130753
14	25.5	0.0	4.0	chr1	71047615	71047664	(177908758)	+	(GCG)n	Simple_repeat	1	50	(0)	134342
32	3.0	0.0	0.0	chr1	72140220	72140253	(176816169)	+	(TGT)n	Simple_repeat	1	34	(0)	135842
1189	24.0	11.7	1.4	chr1	72140276	72140626	(176815796)	C	MSTD	LTR/ERVL-MaLR	(0)	396	5	135843
18	14.1	8.3	0.0	chr1	72282717	72282764	(176673658)	+	(CCTCC)n	Simple_repeat	1	52	(0)	136019
16	18.8	2.8	8.2	chr1	72282765	72282787	(176673635)	+	(CCT)n	Simple_repeat	1	73	(0)	136020
28	17.9	3.7	3.6	chr1	72282853	72282933	(176673489)	+	(GGC)n	Simple_repeat	1	84	(0)	136021
32	7.4	0.0	0.0	chr1	72282939	72282981	(176673441)	+	(CAG)n	Simple_repeat	1	43	(0)	136022
28	25.9	0.0	0.0	chr1	72283089	72283162	(176673260)	+	A-rich	Low_complexity	1	74	(0)	136023
1580	21.7	4.4	2.5	chr1	75438984	75439364	(173517058)	+	MSTD	LTR/ERVL-MaLR	1	425	(3)	139926
1179	24.7	7.1	3.1	chr1	75439366	75439437	(173516985)	+	L1MEd	LINE/L1	922	994	(6109)	139925
817	20.3	0.0	0.0	chr1	75439438	75439565	(173516857)	+	FLAM_A	SINE/Alu	2	129	(13)	139927
27	27.3	2.6	3.3	chr1	76074604	76074720	(172881702)	+	G-rich	Low_complexity	1	120	(0)	140897
903	24.6	15.9	2.1	chr1	76852011	76852350	(172104072)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	142043
599	11.1	0.0	0.0	chr1	77779898	77779987	(171176435)	+	5S	rRNA	1	90	(31)	143484
18	7.7	0.0	0.0	chr1	77888599	77888626	(171067796)	+	(CGG)n	Simple_repeat	1	28	(0)	143695
525	32.3	1.8	2.4	chr1	78346803	78346967	(170609455)	C	MamGypLTR3	LTR/Gypsy	(458)	436	273	144466
14	22.4	4.0	6.3	chr1	79545319	79545394	(169411028)	+	(TTTA)n	Simple_repeat	1	79	(0)	146038
1054	19.3	18.6	3.8	chr1	79545518	79545862	(169410560)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	146039
2300	18.2	0.9	4.1	chr1	79691851	79692081	(169264341)	C	MSTC	LTR/ERVL-MaLR	(0)	428	204	146211
1848	17.4	0.3	2.5	chr1	79692082	79692397	(169264025)	C	AluJb	SINE/Alu	(3)	309	1	146212
2300	18.2	0.9	4.1	chr1	79692398	79692607	(169263815)	C	MSTC	LTR/ERVL-MaLR	(225)	203	1	146211
1415	20.7	8.3	7.6	chr1	80393436	80393817	(168562605)	+	MLT1B	LTR/ERVL-MaLR	1	385	(5)	147128
2586	24.2	7.6	5.8	chr1	80605313	80605620	(168350802)	C	L1MEg2	LINE/L1	(1553)	5901	5542	147415
1103	25.1	7.3	7.8	chr1	80605621	80606018	(168350404)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	147416
1257	24.7	4.8	4.4	chr1	81958637	81959072	(166997350)	C	L1ME1	LINE/L1	(21)	6158	5721	149185
813	24.6	3.9	2.1	chr1	82034905	82035167	(166921255)	+	MSTD	LTR/ERVL-MaLR	196	465	(0)	149275
366	22.1	7.0	3.3	chr1	82035169	82035318	(166921104)	C	L1MEd	LINE/L1	(5101)	2002	1847	149272
13	23.3	2.5	0.0	chr1	84690281	84690320	(164266102)	+	(CGCC)n	Simple_repeat	1	41	(0)	152919
15	11.0	7.3	2.3	chr1	84690710	84690750	(164265672)	+	(CTGCGG)n	Simple_repeat	1	44	(0)	152920
12	22.7	5.7	1.8	chr1	84690818	84690870	(164265552)	+	G-rich	Low_complexity	1	56	(0)	152921
21	29.4	0.0	0.0	chr1	85201169	85201234	(163755188)	+	(TCG)n	Simple_repeat	1	66	(0)	153784
17	11.3	0.0	0.0	chr1	85201664	85201692	(163754730)	+	(GCG)n	Simple_repeat	1	29	(0)	153785
16	12.8	9.4	1.7	chr1	85201785	85201837	(163754585)	+	G-rich	Low_complexity	1	58	(0)	153786
1648	17.4	8.3	1.5	chr1	86117185	86117522	(162838900)	+	MLT1A0	LTR/ERVL-MaLR	1	363	(2)	155173
2425	8.5	0.0	0.3	chr1	86934646	86934952	(162021470)	+	AluY	SINE/Alu	1	306	(5)	156358
1830	21.9	6.3	8.9	chr1	86934953	86935040	(162021382)	C	L1MCb	LINE/L1	(6421)	330	251	156357
20	7.7	15.3	2.4	chr1	87328746	87328817	(161627605)	+	(GAGC)n	Simple_repeat	1	83	(0)	156907
21	29.0	2.6	3.1	chr1	87328818	87328847	(161627575)	+	G-rich	Low_complexity	3	103	(0)	156908
14	9.9	2.8	5.4	chr1	87328906	87328941	(161627481)	+	(CGCCG)n	Simple_repeat	1	37	(0)	156909
659	32.2	4.5	0.8	chr1	88127760	88127997	(160828425)	C	MIR	SINE/MIR	(13)	249	3	158056
475	27.9	3.6	2.4	chr1	88127998	88128156	(160828266)	C	MIRb	SINE/MIR	(70)	198	38	158054
947	17.9	5.4	3.1	chr1	89655482	89655783	(159300639)	C	MSTD	LTR/ERVL-MaLR	(0)	396	62	160140
379	24.4	9.8	1.9	chr1	89655828	89655986	(159300436)	C	MLT1J	LTR/ERVL-MaLR	(243)	269	97	160141
1841	16.9	0.3	3.3	chr1	92086414	92086646	(156869776)	+	AluJb	SINE/Alu	75	298	(14)	163860
1034	20.1	7.5	1.6	chr1	92086655	92086945	(156869477)	+	MSTD	LTR/ERVL-MaLR	56	396	(0)	163856
317	23.1	13.6	0.8	chr1	92086974	92087095	(156869327)	+	MSTD	LTR/ERVL-MaLR	436	575	(35)	163856
1236	18.0	21.5	2.2	chr1	92286696	92287013	(156669409)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	164194
1693	16.7	12.0	0.6	chr1	92408424	92408754	(156547668)	+	MSTD	LTR/ERVL-MaLR	23	396	(0)	164407
59	0.0	0.0	0.0	chr1	92831758	92831810	(156124612)	+	(AACAA)n	Simple_repeat	1	53	(0)	165195
13	4.1	3.7	3.6	chr1	93179890	93179916	(155776506)	+	(GCCTC)n	Simple_repeat	1	28	(0)	165854
13	9.7	0.0	0.0	chr1	93180359	93180380	(155776042)	+	(GGC)n	Simple_repeat	1	22	(0)	165855
18	30.7	1.3	2.5	chr1	93909334	93909412	(155047010)	+	(CGG)n	Simple_repeat	1	80	(0)	167024
2329	9.1	0.3	0.3	chr1	94152031	94152327	(154804095)	C	AluSp	SINE/Alu	(16)	297	1	167368
250	29.9	9.3	0.8	chr1	94152770	94152897	(154803525)	+	MIR	SINE/MIR	5	144	(118)	167369
1517	20.2	9.1	0.2	chr1	95287441	95287842	(153668580)	+	Charlie4a	DNA/hAT-Charlie	20	460	(48)	169140
330	31.9	7.0	2.1	chr1	95287996	95288145	(153668277)	+	L2a	LINE/L2	3233	3424	(2)	169141
17	18.9	2.9	7.0	chr1	96721667	96721735	(152234687)	+	(CGC)n	Simple_repeat	1	71	(0)	171072
358	6.2	0.0	0.0	chr1	97267366	97267413	(151689009)	+	L1P2	LINE/L1	1376	1423	(4761)	171833
1161	21.8	4.7	9.9	chr1	97267431	97267792	(151688630)	C	MLT1A	LTR/ERVL-MaLR	(54)	342	1	171831
1895	17.2	8.6	0.8	chr1	98895076	98895438	(150060984)	+	MSTD	LTR/ERVL-MaLR	1	394	(2)	174066
2293	17.5	1.8	1.5	chr1	99522386	99522780	(149433642)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	174943
1284	17.5	8.1	1.1	chr1	102167895	102168160	(146788262)	+	MLT1A1-int	LTR/ERVL-MaLR	1450	1735	(0)	178984
704	22.5	12.8	1.5	chr1	102168161	102168476	(146787946)	+	MLT1A1	LTR/ERVL-MaLR	1	391	(5)	178984
4759	26.8	10.3	3.7	chr1	102545171	102546784	(146409638)	C	MSTD-int	LTR/ERVL-MaLR	(0)	1735	2	179439
1258	24.9	11.6	1.4	chr1	102546787	102547141	(146409281)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	179439
1310	21.9	11.4	2.5	chr1	104105468	104105827	(144850595)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	181310
227	23.9	3.6	8.8	chr1	104105828	104105895	(144850527)	C	L1ME3E	LINE/L1	(6274)	829	767	181309
288	27.0	0.0	1.6	chr1	104105903	104105966	(144850456)	C	L1ME3E	LINE/L1	(6434)	669	607	181309
2501	8.8	0.0	0.0	chr1	107891557	107891864	(141064558)	+	AluSx	SINE/Alu	1	308	(4)	186035
340	33.8	11.1	4.7	chr1	107891865	107892060	(141064362)	+	MIRb	SINE/MIR	36	257	(11)	186034
1786	18.6	2.0	13.4	chr1	107907445	107907892	(141048530)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	186058
2276	10.4	0.0	0.0	chr1	109099461	109099757	(139856665)	+	AluSg	SINE/Alu	1	297	(13)	187984
831	16.9	6.9	0.0	chr1	109099836	109099983	(139856439)	+	FRAM	SINE/Alu	1	159	(17)	187985
1704	16.9	8.6	4.7	chr1	109899300	109899679	(139056743)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	189246
296	27.0	0.0	0.0	chr1	110437238	110437300	(138519122)	C	LTR16E1	LTR/ERVL	(440)	98	36	190146
15	26.3	0.0	0.0	chr1	112956340	112956376	(136000046)	+	(CG)n	Simple_repeat	1	37	(0)	194126
320	26.3	7.7	0.7	chr1	112956706	112956908	(135999514)	+	MIR	SINE/MIR	17	237	(31)	194127
2290	15.1	2.8	2.5	chr1	113246000	113246394	(135710028)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	194744
1360	21.9	10.0	1.7	chr1	113447178	113447534	(135508888)	C	MSTD	LTR/ERVL-MaLR	(6)	390	1	195055
2327	16.5	0.8	2.2	chr1	116470701	116471102	(132485320)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	199751
291	15.5	15.6	2.8	chr1	116471243	116471348	(132485074)	C	MER96B	DNA/hAT-Tip100	(239)	178	57	199752
16	22.7	5.2	3.7	chr1	117121531	117121613	(131834809)	+	(CCCGCCA)n	Simple_repeat	1	84	(0)	200776
45	2.3	0.0	0.0	chr1	117367314	117367358	(131589064)	+	(GAG)n	Simple_repeat	1	45	(0)	201206
14	4.7	0.0	4.2	chr1	117367469	117367492	(131588930)	+	(GCG)n	Simple_repeat	1	24	(0)	201207
1716	21.8	7.3	2.4	chr1	117780662	117781037	(131175385)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	201785
269	25.9	19.8	0.6	chr1	119367321	119367479	(129588943)	C	MIR	SINE/MIR	(51)	211	15	204032
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
22	22.9	0.0	0.0	chr1	144412465	144412510	(104543912)	+	G-rich	Low_complexity	1	46	(0)	209361
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
1305	7.9	0.0	0.6	chr1	145281116	145281281	(103675141)	+	U1	snRNA	1	165	(0)	210764
449	35.1	6.0	6.6	chr1	145541050	145541351	(103415071)	C	L2c	LINE/L2	(0)	3387	3088	211139
285	23.6	4.0	0.0	chr1	145541423	145541494	(103414928)	C	Chap1_Mam	DNA/hAT-Charlie	(255)	87	13	211140
208	29.9	14.9	0.7	chr1	145770988	145771084	(103185338)	C	L3	LINE/CR1	(769)	3330	3207	211491
1845	19.7	5.3	1.8	chr1	145771085	145771466	(103184956)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	211492
208	29.9	14.9	0.7	chr1	145771467	145771523	(103184899)	C	L3	LINE/CR1	(893)	3206	3151	211491
784	15.9	14.8	0.0	chr1	147084619	147084756	(101871666)	C	U1	snRNA	(3)	162	1	213627
5095	6.2	0.0	0.0	chr1	147098257	147098867	(101857555)	C	LTR13	LTR/ERVK	(395)	612	2	213655
2377	9.0	0.3	1.6	chr1	147487743	147488052	(101468370)	+	AluSx1	SINE/Alu	2	307	(5)	214151
1539	23.4	14.7	0.8	chr1	147488073	147488598	(101467824)	C	L2	LINE/L2	(1540)	1879	1268	214149
654	1.4	0.0	0.0	chr1	148265108	148265179	(100691243)	C	tRNA-Gln-CAG	tRNA	(3)	72	1	215393
1017	20.6	0.0	0.0	chr1	149636766	149636930	(99319492)	+	U1	snRNA	1	165	(0)	217501
1538	26.2	7.2	4.8	chr1	150409412	150409644	(98546778)	C	L2a	LINE/L2	(0)	3426	3181	218991
2444	10.0	1.3	0.0	chr1	150409645	150409944	(98546478)	C	AluSx	SINE/Alu	(8)	304	1	218992
44	3.7	3.6	0.0	chr1	150579759	150579814	(98376608)	+	(GGCCGG)n	Simple_repeat	1	58	(0)	219361
1495	16.4	3.8	5.1	chr1	150615417	150615708	(98340714)	C	AluJo	SINE/Alu	(24)	288	1	219469
247	24.1	0.0	0.0	chr1	150615951	150616008	(98340414)	+	L2b	LINE/L2	3309	3366	(9)	219470
16	32.0	1.4	1.4	chr1	150876559	150876629	(98079793)	+	(CGC)n	Simple_repeat	1	72	(0)	220009
2198	11.6	0.0	0.3	chr1	151199331	151199631	(97756791)	+	AluSz	SINE/Alu	1	300	(12)	220706
2902	14.6	0.9	0.9	chr1	153503797	153504224	(95452198)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	224188
230	18.2	0.0	0.0	chr1	153568410	153568453	(95387969)	+	MIR3	SINE/MIR	67	110	(98)	224297
1838	10.9	4.8	0.0	chr1	153822521	153822796	(95133626)	C	AluSg	SINE/Alu	(20)	290	1	224820
321	26.6	3.1	3.9	chr1	153966966	153967094	(94989328)	+	MIRc	SINE/MIR	124	251	(17)	225150
1144	15.2	0.0	0.6	chr1	153967505	153967681	(94988741)	+	AluJb	SINE/Alu	137	312	(0)	225151
59	9.6	1.1	0.0	chr1	155244786	155244875	(93711547)	+	(GAGA)n	Simple_repeat	1	91	(0)	227608
14	27.2	1.6	3.2	chr1	155277400	155277462	(93678960)	+	(CCGC)n	Simple_repeat	1	61	(0)	227659
2147	10.4	1.0	1.0	chr1	160146204	160146500	(88809922)	+	AluSq2	SINE/Alu	1	297	(16)	235312
6138	19.5	4.6	4.1	chr1	160533704	160535222	(88421200)	C	L1MB4	LINE/L1	(1005)	5736	4206	235881
1581	21.6	2.4	2.2	chr1	160535223	160535591	(88420831)	+	MLT1A	LTR/ERVL-MaLR	1	370	(4)	235885
69	5.5	1.0	2.9	chr1	161179282	161179382	(87777040)	+	(TTCC)n	Simple_repeat	1	102	(0)	237012
16	8.3	7.1	2.2	chr1	161179383	161179414	(87777008)	+	(TTTCT)n	Simple_repeat	4	38	(0)	237013
2289	9.6	0.3	0.0	chr1	161179440	161179731	(87776691)	C	AluSg4	SINE/Alu	(17)	293	1	237014
12	25.5	0.0	0.0	chr1	161726750	161726786	(87229636)	+	(CGCGG)n	Simple_repeat	1	37	(0)	237995
19	33.5	4.7	0.7	chr1	161727070	161727198	(87229224)	+	(CCCCCGC)n	Simple_repeat	1	135	(0)	237996
205	32.6	2.3	2.3	chr1	161750401	161750488	(87205934)	C	L2c	LINE/L2	(62)	3325	3238	238034
2028	7.5	5.8	2.5	chr1	161750663	161750943	(87205479)	+	AluSx4	SINE/Alu	2	292	(18)	238035
1861	17.3	8.7	2.5	chr1	162252999	162253365	(86703057)	+	MSTD	LTR/ERVL-MaLR	1	392	(4)	238833
1109	31.3	7.9	1.0	chr1	162536564	162536985	(86419437)	C	MamRep1527	LTR	(320)	649	191	239313
2300	8.9	1.0	0.3	chr1	162536986	162537278	(86419144)	+	AluSg	SINE/Alu	1	295	(15)	239314
1109	31.3	7.9	1.0	chr1	162537279	162537362	(86419060)	C	MamRep1527	LTR	(779)	190	106	239313
53	3.9	0.0	0.0	chr1	162537389	162537442	(86418980)	+	(GA)n	Simple_repeat	1	54	(0)	239315
16	26.9	0.0	0.0	chr1	162561485	162561533	(86394889)	+	(CCGCGT)n	Simple_repeat	1	49	(0)	239383
13	19.8	0.0	2.7	chr1	162561644	162561680	(86394742)	+	(GCCCCC)n	Simple_repeat	1	37	(0)	239384
2524	15.8	0.9	1.9	chr1	164189799	164190230	(84766192)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	241768
1165	19.2	17.2	8.4	chr1	165023624	165023981	(83932441)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	242989
12	24.1	0.0	2.4	chr1	166839354	166839394	(82117028)	+	(GGCGCC)n	Simple_repeat	1	41	(0)	245775
1618	16.9	14.7	3.4	chr1	167186759	167187108	(81769314)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	246287
27	17.9	3.7	3.6	chr1	167220781	167220861	(81735561)	+	GA-rich	Low_complexity	1	84	(0)	246371
276	21.7	17.0	3.0	chr1	168179549	168179695	(80776727)	C	L2c	LINE/L2	(38)	3349	3196	247956
1425	15.7	17.1	6.9	chr1	168363486	168363848	(80592574)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	248268
528	30.5	10.7	6.8	chr1	169399670	169400680	(79555742)	+	L1MEc	LINE/L1	29	1388	(1364)	249897
1695	24.8	12.8	0.7	chr1	170603192	170603797	(78352625)	C	L1MEc	LINE/L1	(5678)	722	33	251521
212	36.6	1.8	8.6	chr1	170722839	170723197	(78233225)	C	L2c	LINE/L2	(338)	3081	2748	251682
246	24.4	6.8	1.2	chr1	170723244	170723326	(78233096)	C	MER91C	DNA/hAT-Tip100	(34)	106	19	251684
476	27.7	5.2	7.5	chr1	170723340	170723538	(78232884)	+	L2c	LINE/L2	3194	3387	(0)	251685
1836	15.7	10.7	1.4	chr1	171212103	171212457	(77743965)	+	MSTD	LTR/ERVL-MaLR	5	396	(0)	252368
14	28.5	3.1	1.5	chr1	171841146	171841210	(77115212)	+	(GGTGCT)n	Simple_repeat	1	67	(0)	253434
18	12.1	0.0	5.0	chr1	171841403	171841442	(77114980)	+	G-rich	Low_complexity	1	40	(0)	253435
11996	8.9	0.4	0.2	chr1	173470157	173471734	(75484688)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	255650
31	3.1	0.0	0.0	chr1	174799759	174799791	(74156631)	+	(GCA)n	Simple_repeat	1	33	(0)	257708
57	0.0	0.0	0.0	chr1	174799931	174799979	(74156443)	+	(CA)n	Simple_repeat	1	49	(0)	257709
1470	20.0	15.4	0.0	chr1	177344473	177344807	(71611615)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	261535
1605	17.9	11.4	1.4	chr1	177556407	177556762	(71399660)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	261802
1222	28.4	7.2	4.5	chr1	178692871	178693397	(70263025)	+	Arthur1B	DNA/hAT-Tip100	366	907	(318)	263502
331	30.3	8.3	2.6	chr1	178693417	178693609	(70262813)	C	MamGypLTR1a	LTR/Gypsy	(261)	523	319	263503
17	13.7	0.0	0.0	chr1	178693661	178693692	(70262730)	+	(AAAG)n	Simple_repeat	1	32	(0)	263504
312	28.1	4.8	3.5	chr1	178693693	178693836	(70262586)	C	MamGypLTR1a	LTR/Gypsy	(542)	242	97	263503
21	22.1	7.3	0.0	chr1	178725125	178725192	(70231230)	+	(CG)n	Simple_repeat	1	73	(0)	263565
22	9.4	0.0	0.0	chr1	178725259	178725292	(70231130)	+	(GCG)n	Simple_repeat	1	34	(0)	263566
17	27.9	0.0	6.1	chr1	178725437	178725450	(70230972)	+	G-rich	Low_complexity	1	18	(64)	263567
16	4.5	0.0	0.0	chr1	178725451	178725473	(70230949)	+	(GGGA)n	Simple_repeat	1	23	(0)	263568
17	27.9	0.0	6.1	chr1	178725474	178725518	(70230904)	+	G-rich	Low_complexity	19	82	(0)	263567
3941	19.2	7.5	1.4	chr1	179386930	179387174	(69569248)	C	L1MEc	LINE/L1	(5309)	1091	826	264762
1425	21.9	9.1	2.7	chr1	179387175	179387544	(69568878)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	264765
645	32.3	11.2	2.5	chr1	183428088	183428241	(65528181)	+	L2a	LINE/L2	2628	2800	(619)	271105
2235	15.7	8.1	0.3	chr1	183428242	183428606	(65527816)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	271106
645	31.7	14.8	2.5	chr1	183428607	183429040	(65527382)	+	L2a	LINE/L2	2801	3283	(104)	271105
12	22.4	3.9	3.8	chr1	184387016	184387066	(64569356)	+	(CCCT)n	Simple_repeat	1	53	(0)	272567
21	17.6	0.0	4.0	chr1	184387265	184387314	(64569108)	+	GA-rich	Low_complexity	1	50	(0)	272568
1580	10.5	0.0	0.5	chr1	184713072	184713281	(64243141)	+	AluSx1	SINE/Alu	89	297	(15)	273093
885	25.8	16.8	4.9	chr1	186082218	186082650	(62873772)	C	MLT1H	LTR/ERVL-MaLR	(13)	476	1	275140
34	0.0	0.0	2.9	chr1	186375989	186376022	(62580400)	+	(GT)n	Simple_repeat	1	34	(0)	275491
1306	14.0	0.0	7.4	chr1	186402405	186402625	(62553797)	C	AluJo	SINE/Alu	(22)	290	86	275540
616	24.0	2.3	0.0	chr1	186402635	186402759	(62553663)	C	AluJo	SINE/Alu	(56)	256	129	275542
568	20.2	11.3	0.8	chr1	186402763	186402881	(62553541)	C	AluJr4	SINE/Alu	(179)	133	1	275543
352	33.7	6.5	4.7	chr1	186679921	186680132	(62276290)	C	MIRb	SINE/MIR	(51)	217	2	275943
13	14.3	4.8	4.5	chr1	186680276	186680317	(62276105)	+	(GGCGC)n	Simple_repeat	1	44	(0)	275944
1008	23.9	10.2	7.4	chr1	193440859	193441186	(55515236)	+	MSTD	LTR/ERVL-MaLR	5	344	(52)	284871
33	0.0	0.0	0.0	chr1	193441187	193441214	(55515208)	+	(TA)n	Simple_repeat	1	28	(0)	284872
1008	23.9	10.2	7.4	chr1	193441215	193441265	(55515157)	+	MSTD	LTR/ERVL-MaLR	345	396	(0)	284871
879	17.9	3.6	4.0	chr1	193526930	193527127	(55429295)	C	MSTD	LTR/ERVL-MaLR	(0)	396	200	284981
1126	21.6	6.6	0.8	chr1	193527095	193527337	(55429085)	C	MLT2B3	LTR/ERVL	(296)	258	1	284982
1501	23.5	5.2	2.0	chr1	194121214	194121608	(54834814)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	285731
5329	20.9	4.0	3.9	chr1	194121611	194121672	(54834750)	C	L1M1	LINE/L1	(813)	6746	6691	285732
1456	23.6	3.0	2.8	chr1	194121673	194122065	(54834357)	C	MSTD	LTR/ERVL-MaLR	(2)	394	1	285733
5329	23.8	4.3	3.6	chr1	194122066	194124072	(54832350)	C	L1M1	LINE/L1	(869)	6690	2922	285732
10597	11.2	2.1	2.2	chr1	197080684	197082265	(51874157)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	289450
3013	26.7	4.9	4.7	chr1	197245537	197246632	(51709790)	C	L1PA7	LINE/L1	(5449)	1184	18	289655
744	13.1	2.5	20.2	chr1	200507279	200507476	(48448946)	C	AluJr	SINE/Alu	(11)	301	140	294402
1172	24.9	5.0	5.7	chr1	201249340	201249744	(47706678)	+	L2a	LINE/L2	3025	3426	(0)	295724
2798	11.9	3.8	0.0	chr1	201249752	201250161	(47706261)	C	MSTC	LTR/ERVL-MaLR	(0)	428	3	295725
24	20.0	4.2	5.0	chr1	201539287	201539381	(47417041)	+	(GCGCG)n	Simple_repeat	1	99	(0)	296223
2051	18.4	6.3	1.6	chr1	201927869	201928244	(47028178)	+	MSTD	LTR/ERVL-MaLR	1	395	(1)	296860
1158	19.5	7.9	8.1	chr1	203143090	203143446	(45812976)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	19	299122
421	31.3	7.3	2.7	chr1	203275882	203276104	(45680318)	+	MIRb	SINE/MIR	32	265	(3)	299330
2440	7.7	0.3	0.0	chr1	203276105	203276402	(45680020)	+	AluY	SINE/Alu	1	299	(12)	299331
1672	21.0	6.7	1.6	chr1	203985657	203986024	(44970398)	C	MSTD	LTR/ERVL-MaLR	(8)	388	1	300723
2411	8.2	0.3	1.3	chr1	204505169	204505483	(44450939)	+	AluSx1	SINE/Alu	1	312	(0)	301654
17	26.0	0.0	5.6	chr1	205631508	205631578	(43324844)	+	(CCCGGC)n	Simple_repeat	1	71	(0)	303802
15	29.1	1.9	0.0	chr1	205631725	205631778	(43324644)	+	(CGG)n	Simple_repeat	1	55	(0)	303803
13	22.0	4.1	2.0	chr1	208243835	208243883	(40712539)	+	(CGCTCCG)n	Simple_repeat	1	51	(0)	307821
35	2.8	0.0	0.0	chr1	208244300	208244336	(40712086)	+	(GCG)n	Simple_repeat	1	37	(0)	307822
12	14.0	7.3	2.3	chr1	208244413	208244453	(40711969)	+	(CCGCGG)n	Simple_repeat	1	44	(0)	307823
17	23.0	0.0	4.9	chr1	208244441	208244501	(40711921)	+	(CCGCCC)n	Simple_repeat	1	61	(0)	307824
18	26.0	2.2	5.4	chr1	208244454	208244502	(40711920)	+	(CCCG)n	Simple_repeat	2	93	(0)	307825
12	13.2	5.7	2.7	chr1	211258586	211258620	(37697802)	+	GA-rich	Low_complexity	1	37	(0)	312387
15	20.4	0.0	0.0	chr1	211259202	211259230	(37697192)	+	(C)n	Simple_repeat	1	29	(0)	312388
25	19.3	0.0	0.0	chr1	211259429	211259481	(37696941)	+	(CCT)n	Simple_repeat	1	53	(0)	312389
192	38.5	3.9	1.6	chr1	212477025	212477148	(36479274)	+	L2c	LINE/L2	2939	3065	(322)	314581
1793	17.5	11.1	3.1	chr1	212477510	212477552	(36478870)	C	LTR54B	LTR/ERV1	(2)	496	455	314582
1749	14.3	4.9	0.7	chr1	212477553	212477846	(36478576)	C	AluJb	SINE/Alu	(5)	307	1	314583
18	19.3	2.0	2.0	chr1	212625709	212625757	(36330665)	+	(GCA)n	Simple_repeat	1	50	(0)	314867
2822	13.0	2.2	0.2	chr1	213354499	213354908	(35601514)	C	MSTC	LTR/ERVL-MaLR	(9)	419	2	316105
2177	17.2	6.1	2.1	chr1	213891278	213891657	(35064765)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	316895
1907	18.6	2.0	7.8	chr1	214966929	214967349	(33989073)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	318453
2716	10.7	7.8	0.5	chr1	218506123	218506563	(30449859)	C	L1PA13	LINE/L1	(0)	6163	5688	323373
1909	15.3	5.9	1.4	chr1	218506564	218506921	(30449501)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	323374
2481	8.3	0.0	0.6	chr1	219458919	219459231	(29497191)	+	AluSc8	SINE/Alu	1	311	(0)	324646
2203	18.1	0.5	2.0	chr1	219716662	219717061	(29239361)	+	MSTD	LTR/ERVL-MaLR	2	395	(1)	325030
4901	12.1	1.5	5.0	chr1	220378962	220379593	(28576829)	C	LTR1A2	LTR/ERV1	(0)	837	236	326133
1176	20.8	5.6	10.1	chr1	221646905	221647272	(27309150)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	327966
1079	31.2	5.8	2.1	chr1	223530663	223530997	(25425425)	+	L2a	LINE/L2	2508	2858	(561)	330853
1594	16.4	16.2	0.9	chr1	223530998	223531342	(25425080)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	330854
1079	31.2	5.8	2.1	chr1	223531343	223531438	(25424984)	+	L2a	LINE/L2	2859	2956	(463)	330853
1026	28.1	5.2	5.7	chr1	223531459	223531846	(25424576)	+	L2a	LINE/L2	3039	3424	(2)	330853
19	3.7	0.0	3.3	chr1	223845786	223845815	(25110607)	+	(GGC)n	Simple_repeat	1	30	(0)	331313
17	19.6	6.7	3.8	chr1	223845956	223846030	(25110392)	+	(CCGCG)n	Simple_repeat	1	80	(0)	331314
1345	21.6	5.7	4.1	chr1	223872171	223872376	(25084046)	C	L1ME1	LINE/L1	(1171)	4975	4777	331345
672	31.1	4.2	3.3	chr1	223872394	223872725	(25083697)	C	L1MEc	LINE/L1	(6029)	371	37	331351
1987	14.1	1.1	1.1	chr1	224011691	224016553	(24939869)	+	(AATGG)n	Simple_repeat	1	4914	(0)	331634
13	7.5	7.1	0.0	chr1	224183155	224183182	(24773240)	+	(GGCG)n	Simple_repeat	1	30	(0)	331974
14	5.0	0.0	0.0	chr1	224183257	224183277	(24773145)	+	(GCC)n	Simple_repeat	1	21	(0)	331975
909	23.2	1.0	2.9	chr1	224266439	224266642	(24689780)	+	MSTD	LTR/ERVL-MaLR	197	396	(0)	332186
1797	16.9	11.7	0.6	chr1	224590420	224590770	(24365652)	C	MSTD	LTR/ERVL-MaLR	(0)	396	2	332833
13	19.2	1.6	9.2	chr1	224929879	224929942	(24026480)	+	(GGCG)n	Simple_repeat	1	65	(0)	333381
1664	19.7	7.6	1.9	chr1	225087085	225087457	(23868965)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	333566
4945	21.1	6.9	1.6	chr1	225087458	225088698	(23867724)	+	L1ME1	LINE/L1	85	1399	(5001)	333565
2548	4.4	0.3	0.3	chr1	225395312	225395609	(23560813)	+	AluY	SINE/Alu	1	298	(13)	333918
343	25.5	7.8	0.0	chr1	225395683	225395788	(23560634)	C	HAL1ME	LINE/L1	(2258)	207	93	333919
811	15.1	23.7	3.4	chr1	225437730	225438006	(23518416)	+	MLT1A1	LTR/ERVL-MaLR	3	372	(24)	333971
254	26.9	4.3	0.0	chr1	225470789	225470855	(23485567)	+	L2a	LINE/L2	3302	3371	(16)	334018
2202	14.9	0.7	0.0	chr1	225747236	225747544	(23208878)	C	AluJo	SINE/Alu	(1)	311	1	334512
1043	16.0	1.3	5.2	chr1	226581346	226581563	(22374859)	C	MSTD	LTR/ERVL-MaLR	(0)	428	197	336151
440	11.4	0.0	0.0	chr1	226581566	226581635	(22374787)	C	Alu	SINE/Alu	(2)	309	240	336152
12933	31.5	3.6	2.4	chr1	227500566	227503796	(21452626)	+	PRIMA41-int	LTR/ERV1	1269	4518	(3238)	337593
202	27.1	3.4	8.6	chr1	227787749	227787841	(21168581)	+	AmnSINE1	SINE/5S-Deu-L2	165	252	(323)	337889
342	33.2	11.2	8.3	chr1	227846642	227847098	(21109324)	+	L1MD	LINE/L1	2965	3436	(2710)	337968
2867	12.9	2.1	0.2	chr1	227995523	227995940	(20960482)	C	MSTC	LTR/ERVL-MaLR	(2)	426	1	338159
2327	9.1	0.0	0.0	chr1	228621129	228621435	(20334987)	+	AluY	SINE/Alu	1	307	(4)	338912
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
563	22.5	0.0	1.6	chr1	228647911	228648032	(20308390)	C	5S	rRNA	(1)	120	1	338982
41	24.7	5.6	3.4	chr1	229271387	229271584	(19684838)	+	(GGCGCGG)n	Simple_repeat	1	209	(0)	339986
921	28.0	3.2	4.1	chr1	229849350	229849692	(19106730)	+	Charlie13b	DNA/hAT-Charlie	27	366	(146)	341014
1421	18.6	13.1	8.3	chr1	230255863	230256156	(18700266)	C	MSTD	LTR/ERVL-MaLR	(0)	396	80	341603
2199	10.5	0.7	3.0	chr1	230256157	230256461	(18699961)	+	AluSx1	SINE/Alu	1	298	(14)	341604
3911	20.9	6.6	7.8	chr1	230449298	230450737	(18505685)	+	Zaphod2	DNA/hAT-Tip100	2096	3516	(8)	341892
2160	16.4	3.3	6.4	chr1	230614962	230615215	(18341207)	C	MSTD	LTR/ERVL-MaLR	(0)	396	163	342148
1947	18.3	6.9	0.5	chr1	230615216	230615584	(18340838)	+	MSTD	LTR/ERVL-MaLR	1	394	(2)	342149
2160	16.4	3.3	6.4	chr1	230615585	230615738	(18340684)	C	MSTD	LTR/ERVL-MaLR	(234)	162	1	342148
1020	14.9	0.0	2.5	chr1	230741915	230742075	(18214347)	+	AluJo	SINE/Alu	142	298	(14)	342342
1411	27.0	5.1	5.4	chr1	230742083	230742310	(18214112)	C	L1ME4b	LINE/L1	(18)	874	633	342343
2636	13.4	2.1	3.0	chr1	230833548	230833979	(18122443)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	342485
2230	17.3	5.6	1.7	chr1	232337461	232337871	(16618551)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	344842
24	12.3	2.3	0.0	chr1	233295575	233295618	(15660804)	+	(GCC)n	Simple_repeat	1	45	(0)	346165
67	20.3	0.6	3.1	chr1	233295855	233296013	(15660409)	+	(TTTC)n	Simple_repeat	1	160	(0)	346166
1787	19.6	6.1	3.1	chr1	234567021	234567404	(14389018)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	348102
274	40.4	0.5	6.6	chr1	234567407	234567445	(14388977)	C	MIR3	SINE/MIR	(18)	190	159	348103
2463	8.2	0.0	0.3	chr1	234567446	234567750	(14388672)	+	AluSp	SINE/Alu	1	304	(9)	348104
14	16.2	1.8	8.6	chr1	234608656	234608712	(14347710)	+	(GCGGCC)n	Simple_repeat	1	58	(0)	348163
35	25.3	1.0	2.0	chr1	234724082	234724179	(14232243)	+	GA-rich	Low_complexity	1	99	(0)	348335
2816	11.5	1.9	3.2	chr1	234912505	234912936	(14043486)	+	MSTC	LTR/ERVL-MaLR	3	428	(0)	348651
34	0.0	4.2	4.0	chr1	235126056	235126103	(13830319)	+	(GATA)n	Simple_repeat	1	50	(0)	349080
16	0.0	0.0	0.0	chr1	235126125	235126142	(13830280)	+	(AC)n	Simple_repeat	1	18	(0)	349081
1885	13.0	1.7	0.7	chr1	235126148	235126431	(13829991)	C	AluSx	SINE/Alu	(25)	287	1	349082
746	24.0	2.2	3.9	chr1	235257976	235258049	(13698373)	C	MIR	SINE/MIR	(72)	190	116	349333
2261	11.7	0.3	0.3	chr1	235258050	235258358	(13698064)	+	AluSx	SINE/Alu	1	309	(3)	349334
746	24.0	2.2	3.9	chr1	235258359	235258465	(13697957)	C	MIR	SINE/MIR	(147)	115	12	349333
13	22.5	3.6	3.5	chr1	235504156	235504218	(13452204)	+	(CGCAGG)n	Simple_repeat	1	63	(0)	349877
2673	13.8	1.4	1.6	chr1	235530890	235531317	(13425105)	+	MSTC	LTR/ERVL-MaLR	1	427	(1)	349941
632	26.6	6.5	0.4	chr1	235531662	235531891	(13424531)	+	MIR	SINE/MIR	3	247	(15)	349942
2639	17.9	4.0	4.4	chr1	235796193	235796522	(13159900)	+	L1MB7	LINE/L1	5057	5384	(800)	350407
1347	19.8	14.7	1.5	chr1	235796523	235796865	(13159557)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	350408
250	28.4	6.7	2.8	chr1	236087495	236087666	(12868756)	+	L2b	LINE/L2	2950	3142	(245)	350969
1790	17.6	6.1	7.0	chr1	236087732	236087978	(12868444)	C	MSTD	LTR/ERVL-MaLR	(1)	395	144	350970
2048	14.2	0.7	0.0	chr1	236087979	236088280	(12868142)	C	AluSz6	SINE/Alu	(8)	304	1	350971
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
16	14.3	0.0	6.8	chr1	236281579	236281622	(12674800)	+	(GGCCC)n	Simple_repeat	1	44	(0)	351303
779	17.6	13.6	0.0	chr1	237223151	237223454	(11732968)	C	MLT1A1	LTR/ERVL-MaLR	(0)	396	1	352965
3134	7.9	4.8	0.0	chr1	237603009	237603464	(11352958)	+	LSU-rRNA_Hsa	rRNA	3637	4115	(920)	353582
24526	4.8	0.6	0.2	chr1	237603459	237607585	(11348837)	+	L1PA5	LINE/L1	2032	6152	(2)	353583
11522	12.0	1.7	0.5	chr1	238033900	238036991	(10919431)	+	L1PB1	LINE/L1	255	3408	(3454)	354126
1484	22.8	4.8	2.8	chr1	238613391	238613778	(10342644)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	354939
1570	20.3	7.8	1.9	chr1	238991027	238991397	(9965025)	+	MSTD	LTR/ERVL-MaLR	2	396	(0)	355456
259	36.8	8.1	4.6	chr1	238991407	238991668	(9964754)	C	L2c	LINE/L2	(0)	3387	3116	355457
1151	11.7	28.2	0.0	chr1	239107678	239107891	(9848531)	C	AluSc	SINE/Alu	(10)	299	2	355619
196	27.6	2.6	7.3	chr1	239107927	239108008	(9848414)	C	L2c	LINE/L2	(0)	3387	3310	355620
301	24.0	8.0	5.5	chr1	239966432	239966541	(8989881)	+	L2a	LINE/L2	3314	3426	(0)	356926
30	24.1	0.9	4.7	chr1	241639705	241639834	(7316588)	+	(GGCGG)n	Simple_repeat	1	125	(0)	359585
18	29.4	1.5	0.0	chr1	241640173	241640238	(7316184)	+	(CCGCCG)n	Simple_repeat	1	67	(0)	359586
1772	12.0	11.0	0.0	chr1	242248867	242249124	(6707298)	+	AluSx	SINE/Alu	2	291	(21)	360688
1000	17.0	16.4	17.4	chr1	242249125	242249481	(6706941)	+	MLT1A1	LTR/ERVL-MaLR	57	408	(0)	360687
13	18.9	0.0	0.0	chr1	243254979	243255008	(5701414)	+	(GCG)n	Simple_repeat	1	30	(0)	362301
18	13.9	0.0	0.0	chr1	243255125	243255157	(5701265)	+	(TCG)n	Simple_repeat	1	33	(0)	362302
15	23.9	4.1	0.0	chr1	244048208	244048256	(4908166)	+	(CGC)n	Simple_repeat	1	51	(0)	363518
15	13.1	2.0	8.0	chr1	244048243	244048291	(4908131)	+	(CCGCC)n	Simple_repeat	1	50	(0)	363519
1991	13.9	0.0	5.3	chr1	244070611	244070795	(4885627)	C	AluSg	SINE/Alu	(4)	306	135	363537
1611	17.4	0.0	1.4	chr1	244461823	244462103	(4494319)	C	AluJr	SINE/Alu	(21)	291	15	364218
1750	18.6	7.1	5.2	chr1	244616403	244616788	(4339634)	C	MSTD	LTR/ERVL-MaLR	(2)	394	1	364447
16	10.5	3.2	0.0	chr1	244863106	244863136	(4093286)	+	(CCCCG)n	Simple_repeat	1	32	(0)	364909
30	0.0	0.0	0.0	chr1	244863396	244863421	(4093001)	+	(AC)n	Simple_repeat	1	26	(0)	364910
17	20.4	2.1	2.1	chr1	244863617	244863663	(4092759)	+	(CCG)n	Simple_repeat	1	48	(0)	364911
14	31.3	0.0	0.0	chr1	244863779	244863829	(4092593)	+	(GCT)n	Simple_repeat	1	51	(0)	364912
1436	19.3	9.3	2.1	chr1	244869075	244869412	(4087010)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	364923
1387	18.7	5.7	4.8	chr1	244993272	244993585	(3962837)	C	MLT1F-int	LTR/ERVL-MaLR	(0)	1489	1173	365241
1841	17.6	6.5	0.6	chr1	244993586	244993946	(3962476)	C	MSTD	LTR/ERVL-MaLR	(0)	396	13	365242
3624	23.9	5.5	6.7	chr1	244993983	244994426	(3961996)	C	MLT1F-int	LTR/ERVL-MaLR	(309)	1180	726	365241
948	21.4	7.3	10.4	chr1	245007844	245007882	(3948540)	C	Charlie17b	DNA/hAT-Charlie	(1)	1203	1171	365276
1939	15.9	0.7	3.5	chr1	245007883	245008196	(3948226)	+	AluJr	SINE/Alu	1	305	(7)	365277
948	21.4	7.3	10.4	chr1	245008197	245008609	(3947813)	C	Charlie17b	DNA/hAT-Charlie	(34)	1170	766	365276
826	22.9	9.5	5.6	chr1	245925916	245926264	(3030158)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	366710
1126	22.1	6.4	2.9	chr1	247404856	247405251	(1551171)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	113	369117
972	21.2	0.5	4.1	chr1	247405275	247405495	(1550927)	C	MSTD	LTR/ERVL-MaLR	(0)	396	184	369118
816	17.7	23.1	0.8	chr1	247405496	247405742	(1550680)	C	AluJb	SINE/Alu	(2)	310	9	369119
641	11.4	0.5	0.0	chr10	707853	707956	(133089466)	C	ALR/Alpha	Satellite/centr	(20)	104	1	371759
1571	15.3	17.6	0.0	chr10	707943	708264	(133089158)	C	MSTD	LTR/ERVL-MaLR	(2)	379	1	371758
15	21.2	0.0	4.3	chr10	1048784	1048830	(132748592)	+	(GCCCC)n	Simple_repeat	1	47	(0)	372218
1106	23.2	10.4	1.7	chr10	4655387	4655746	(129141676)	C	MSTD	LTR/ERVL-MaLR	(1)	395	1	376758
1420	15.6	19.2	3.4	chr10	5312165	5312522	(128484900)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	377553
270	31.8	2.3	1.6	chr10	5678349	5678476	(128118946)	C	HERV16-int	LTR/ERVL	(4862)	134	6	378116
988	25.0	9.1	1.2	chr10	5678483	5678806	(128118616)	C	LTR16B1	LTR/ERVL	(0)	480	129	378116
11	19.6	10.0	1.5	chr10	5977342	5977401	(127820021)	+	(CCAGCTC)n	Simple_repeat	1	66	(0)	378667
15	15.3	0.0	0.0	chr10	5977417	5977445	(127819977)	+	(GCA)n	Simple_repeat	1	29	(0)	378668
2481	5.9	0.0	2.0	chr10	6250284	6250586	(127546836)	+	AluY	SINE/Alu	1	297	(14)	379183
1526	11.6	19.3	6.6	chr10	6250587	6250865	(127546557)	+	MLT1A1	LTR/ERVL-MaLR	79	405	(3)	379182
569	25.7	1.7	5.9	chr10	6250915	6251100	(127546322)	C	MER5B	DNA/hAT-Charlie	(0)	178	1	379184
2346	14.0	6.3	4.3	chr10	12652937	12653355	(121144067)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	389348
1729	19.3	3.7	1.6	chr10	13255281	13255654	(120541768)	C	MSTD	LTR/ERVL-MaLR	(0)	396	15	390392
13	11.7	3.6	0.0	chr10	14043522	14043549	(119753873)	+	(TCTCC)n	Simple_repeat	1	29	(0)	391821
1699	20.5	0.0	0.7	chr10	14043832	14044128	(119753294)	C	AluJr4	SINE/Alu	(17)	295	1	391822
1148	22.5	15.6	2.7	chr10	14316182	14316514	(119480908)	+	MSTD	LTR/ERVL-MaLR	1	384	(12)	392256
17	11.6	0.0	0.0	chr10	14316516	14316544	(119480878)	+	(AAG)n	Simple_repeat	1	29	(0)	392257
1738	17.0	6.3	14.3	chr10	14359889	14360321	(119437101)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	392318
1572	14.5	18.2	5.5	chr10	14573182	14573444	(119223978)	+	MSTD	LTR/ERVL-MaLR	1	321	(75)	392680
1727	13.7	3.7	5.7	chr10	14573445	14573744	(119223678)	+	AluSz	SINE/Alu	1	294	(18)	392681
13	15.5	4.1	5.9	chr10	15097302	15097350	(118700072)	+	(GCGAG)n	Simple_repeat	1	51	(0)	393620
2181	13.8	4.4	0.0	chr10	16243254	16243598	(117553824)	+	MLT1B	LTR/ERVL-MaLR	18	378	(12)	395449
1045	23.9	3.7	2.3	chr10	16243599	16243940	(117553482)	C	MSTD	LTR/ERVL-MaLR	(0)	396	19	395450
17	14.5	0.0	0.0	chr10	16243977	16244007	(117553415)	+	(CAA)n	Simple_repeat	1	31	(0)	395451
1338	18.1	17.0	0.3	chr10	16872421	16872724	(116924698)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	396510
13	26.8	4.7	1.5	chr10	17454109	17454172	(116343250)	+	(GGCGC)n	Simple_repeat	1	67	(0)	397407
21	8.9	2.8	0.0	chr10	17454181	17454216	(116343206)	+	(GCA)n	Simple_repeat	1	37	(0)	397408
30	27.5	3.1	3.0	chr10	17454240	17454368	(116343054)	+	(CGC)n	Simple_repeat	1	133	(0)	397409
13	14.0	0.0	5.7	chr10	17454456	17454498	(116342924)	+	(CGGCCC)n	Simple_repeat	1	40	(0)	397410
306	30.4	0.0	2.8	chr10	17454570	17454640	(116342782)	C	L1MD2	LINE/L1	(6075)	472	404	397411
1766	18.8	8.4	0.0	chr10	17941908	17942268	(115855154)	+	MSTD	LTR/ERVL-MaLR	3	396	(0)	398304
6334	14.0	4.7	6.2	chr10	18693040	18693303	(115104119)	+	Tigger3b	DNA/TcMar-Tigger	983	1231	(0)	399495
1099	22.6	9.6	5.2	chr10	18693338	18693569	(115103853)	C	MSTD	LTR/ERVL-MaLR	(0)	396	173	399500
2129	13.5	0.0	0.0	chr10	18693570	18693857	(115103565)	+	AluSx	SINE/Alu	2	289	(23)	399501
196	43.1	4.9	2.9	chr10	18869178	18869454	(114927968)	+	MamRTE1	LINE/RTE-BovB	3385	3667	(145)	399777
1142	20.1	14.7	4.2	chr10	18913091	18913443	(114883979)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	399842
371	30.7	7.3	3.8	chr10	20329135	20329320	(113468102)	C	MIR	SINE/MIR	(0)	262	70	401930
1402	22.3	14.9	0.3	chr10	20329322	20329659	(113467763)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	401931
6042	24.3	6.8	2.9	chr10	20329662	20331320	(113466102)	+	MSTD-int	LTR/ERVL-MaLR	2	1730	(5)	401931
1250	22.6	12.9	0.2	chr10	20989841	20990265	(112807157)	+	Charlie4a	DNA/hAT-Charlie	22	508	(0)	402802
1773	17.1	3.4	1.2	chr10	20990294	20990637	(112806785)	+	MLT1A0	LTR/ERVL-MaLR	14	365	(0)	402803
16	7.8	0.0	3.5	chr10	21173846	21173874	(112623548)	+	(CGG)n	Simple_repeat	1	29	(0)	403076
13	10.7	6.7	0.0	chr10	21173923	21173952	(112623470)	+	(GGCG)n	Simple_repeat	1	32	(0)	403077
18	11.2	0.0	6.8	chr10	21174033	21174090	(112623332)	+	(CTCCGG)n	Simple_repeat	1	54	(0)	403078
14	25.5	1.9	1.9	chr10	21174132	21174158	(112623264)	+	(CGCGCC)n	Simple_repeat	1	52	(0)	403079
12	8.8	4.2	0.0	chr10	21174159	21174182	(112623240)	+	(CCG)n	Simple_repeat	1	25	(0)	403080
1560	21.1	1.7	9.4	chr10	21946346	21946800	(111850622)	+	L1M5	LINE/L1	5360	5778	(395)	404571
1175	16.4	20.2	0.6	chr10	21946807	21947124	(111850298)	+	MLT1A1	LTR/ERVL-MaLR	1	396	(12)	404572
15	9.9	8.5	3.9	chr10	21947125	21947171	(111850251)	+	(ATGTC)n	Simple_repeat	1	51	(0)	404573
435	14.7	0.0	0.0	chr10	21947264	21947331	(111850091)	+	Tigger2b_Pri	DNA/TcMar-Tigger	2	69	(999)	404574
2062	12.1	15.2	0.8	chr10	21947316	21947697	(111849725)	+	Tigger2	DNA/TcMar-Tigger	2267	2713	(5)	404575
2095	16.7	1.6	0.0	chr10	22000604	22000962	(111796460)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	404665
630	26.0	1.8	10.0	chr10	22000963	22001012	(111796410)	+	L2a	LINE/L2	3084	3128	(298)	404664
347	28.6	16.9	0.0	chr10	22001015	22001161	(111796261)	+	L2a	LINE/L2	3245	3421	(5)	404664
22	29.0	0.0	0.0	chr10	22003318	22003381	(111794041)	+	(CAG)n	Simple_repeat	1	64	(0)	404666
16	23.4	0.0	2.1	chr10	22003596	22003642	(111793780)	+	(GGCG)n	Simple_repeat	1	47	(0)	404667
1353	20.6	11.7	1.7	chr10	22069965	22070319	(111727103)	+	MSTD	LTR/ERVL-MaLR	2	396	(0)	404764
14	24.9	3.9	0.0	chr10	22320919	22320970	(111476452)	+	G-rich	Low_complexity	1	54	(0)	405115
16	18.9	0.0	0.0	chr10	22321042	22321071	(111476351)	+	G-rich	Low_complexity	1	30	(0)	405116
18	6.3	6.1	0.0	chr10	22321136	22321168	(111476254)	+	(CCCTC)n	Simple_repeat	1	35	(0)	405117
17	25.6	4.2	1.4	chr10	22321169	22321203	(111476219)	+	(CCGC)n	Simple_repeat	4	74	(0)	405118
54	21.9	2.5	2.5	chr10	22321360	22321365	(111476057)	+	(GAGGCG)n	Simple_repeat	1	39	(122)	405119
56	25.5	0.0	0.0	chr10	22321366	22321502	(111475920)	+	GA-rich	Low_complexity	1	137	(0)	405120
54	21.9	2.5	2.5	chr10	22321503	22321516	(111475906)	+	(GAGGCG)n	Simple_repeat	40	161	(0)	405119
15	7.8	3.7	0.0	chr10	22713884	22713910	(111083512)	+	(GCGG)n	Simple_repeat	1	28	(0)	405677
13	21.2	0.0	2.5	chr10	22714013	22714052	(111083370)	+	G-rich	Low_complexity	1	40	(0)	405678
25	15.2	0.0	0.0	chr10	22714113	22714157	(111083265)	+	GA-rich	Low_complexity	1	45	(0)	405679
17	20.6	6.1	2.9	chr10	22714404	22714471	(111082951)	+	(GCC)n	Simple_repeat	1	70	(0)	405680
443	15.8	0.7	3.8	chr10	22714478	22714635	(111082787)	C	LTR27E	LTR/ERV1	(91)	986	834	405681
12	16.9	2.9	2.8	chr10	23095584	23095618	(110701804)	+	(GCGGC)n	Simple_repeat	1	36	(0)	406263
2422	15.5	3.7	3.1	chr10	23361611	23362035	(110435387)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	406696
260	33.3	1.2	0.0	chr10	24356308	24356388	(109441034)	C	MIRc	SINE/MIR	(155)	113	32	408367
1926	16.0	6.8	2.4	chr10	24356509	24356886	(109440536)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	408368
227	17.3	1.9	5.5	chr10	27757289	27757343	(106040079)	C	MamGypsy2-I	LTR/Gypsy	(2177)	1989	1937	413932
1243	16.9	20.4	0.7	chr10	27757375	27757684	(106039738)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	22	413938
224	34.7	6.0	4.9	chr10	28205534	28205793	(105591629)	C	L2c	LINE/L2	(0)	3375	3113	414635
1815	17.0	11.9	0.6	chr10	28205794	28206143	(105591279)	+	MSTD	LTR/ERVL-MaLR	1	395	(1)	414636
236	36.2	6.5	0.8	chr10	28206169	28206285	(105591137)	C	L2b	LINE/L2	(12)	3363	3240	414637
18	17.8	0.0	4.2	chr10	28677444	28677491	(105119931)	+	G-rich	Low_complexity	1	48	(0)	415552
2017	22.7	1.0	2.5	chr10	29195055	29195456	(104601966)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	416476
2036	18.4	1.3	4.6	chr10	29341502	29341911	(104455511)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	416714
2171	17.7	3.0	0.0	chr10	29649763	29650146	(104147276)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	417198
607	17.8	1.0	0.0	chr10	30586506	30586606	(103210816)	C	MSTD	LTR/ERVL-MaLR	(49)	347	246	419041
1288	7.3	0.0	0.6	chr10	30586609	30586774	(103210648)	C	MER41-int	LTR/ERV1	(944)	5002	4838	419042
911	18.1	2.3	2.3	chr10	30586786	30586960	(103210462)	C	LTR9	LTR/ERV1	(0)	612	438	419043
17	16.7	2.4	2.3	chr10	32056201	32056242	(101741180)	+	(GGC)n	Simple_repeat	1	43	(0)	421235
1155	20.5	6.2	1.8	chr10	33929778	33930056	(99867366)	C	MER58B	DNA/hAT-Charlie	(9)	332	1	423998
1053	26.3	15.4	3.1	chr10	33930065	33930091	(99867331)	+	L4_A_Mam	LINE/RTE-X	4395	4421	(569)	423999
2352	16.5	6.5	1.2	chr10	33930092	33930496	(99866926)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	424000
863	16.4	8.1	4.4	chr10	38387471	38387827	(95409595)	C	MSTD	LTR/ERVL-MaLR	(0)	457	57	430948
1981	18.3	6.1	3.6	chr10	45066801	45067186	(88730236)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	435604
16	23.5	6.4	2.4	chr10	45672536	45672613	(88124809)	+	(CGCCAG)n	Simple_repeat	1	83	(0)	436407
13	36.1	0.0	2.6	chr10	45672635	45672657	(88124765)	+	(GCCC)n	Simple_repeat	1	76	(0)	436408
14	26.7	0.0	3.8	chr10	45672658	45672710	(88124712)	+	(CGCT)n	Simple_repeat	1	53	(0)	436409
224	18.5	2.0	0.8	chr10	45673228	45673289	(88124133)	+	MIRb	SINE/MIR	103	163	(105)	436410
1531	18.5	11.4	0.3	chr10	47145932	47146283	(86651139)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	438762
804	27.4	7.1	2.5	chr10	47146528	47147027	(86650395)	+	MLT1G3	LTR/ERVL-MaLR	1	566	(25)	438763
414	35.7	13.6	0.7	chr10	50371280	50371755	(83425667)	+	L2a	LINE/L2	2658	3204	(183)	443246
771	19.2	4.9	3.6	chr10	50371760	50372029	(83425393)	C	MSTD	LTR/ERVL-MaLR	(86)	310	1	443249
640	28.5	7.9	3.1	chr10	52644485	52644712	(81152710)	C	MIR	SINE/MIR	(17)	245	6	446570
387	36.3	4.0	2.3	chr10	52644826	52644997	(81152425)	C	Tigger16a	DNA/TcMar-Tigger	(770)	187	13	446571
264	28.1	2.4	1.2	chr10	52823517	52823599	(80973823)	+	MIRb	SINE/MIR	175	258	(10)	446809
974	23.0	4.3	18.5	chr10	52823693	52824156	(80973266)	C	MSTD	LTR/ERVL-MaLR	(0)	396	2	446810
1495	21.7	8.0	0.9	chr10	56267326	56267674	(77529748)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	451238
17	23.9	0.0	0.0	chr10	56267676	56267720	(77529702)	+	(ACACAC)n	Simple_repeat	1	45	(0)	451239
1269	22.9	13.4	1.2	chr10	57028228	57028572	(76768850)	+	MSTD	LTR/ERVL-MaLR	1	394	(2)	452223
2163	16.7	6.1	0.0	chr10	58482323	58482694	(75314728)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	454231
668	34.5	5.0	6.6	chr10	59603898	59604500	(74192922)	C	L2c	LINE/L2	(256)	3131	2539	455795
2183	15.7	3.8	1.1	chr10	59604501	59604855	(74192567)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	455797
668	36.8	4.9	4.4	chr10	59604856	59604924	(74192498)	C	L2c	LINE/L2	(881)	2538	2471	455795
2037	15.7	2.0	0.7	chr10	59835776	59836074	(73961348)	+	AluJo	SINE/Alu	1	303	(9)	456164
1666	20.7	1.5	0.6	chr10	60000287	60000626	(73796796)	+	MSTD	LTR/ERVL-MaLR	1	343	(53)	456452
351	30.3	5.7	0.0	chr10	60183217	60183348	(73614074)	+	L2c	LINE/L2	3215	3354	(33)	456702
1725	17.1	10.1	2.5	chr10	61276402	61276766	(72520656)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	458340
47	4.2	0.0	0.0	chr10	62046991	62047039	(71750383)	+	(TG)n	Simple_repeat	1	49	(0)	459473
210	25.4	8.7	7.3	chr10	62520174	62520241	(71277181)	C	L3	LINE/CR1	(113)	3986	3918	460200
2542	12.7	0.0	2.1	chr10	62520245	62520621	(71276801)	+	MSTC	LTR/ERVL-MaLR	4	372	(56)	460201
19	6.3	5.9	0.0	chr10	62520622	62520656	(71276766)	+	(TCTTT)n	Simple_repeat	1	37	(0)	460202
22240	9.3	0.7	2.3	chr10	62520669	62523661	(71273761)	C	L1PB1	LINE/L1	(7)	6860	3927	460203
5925	23.4	7.6	4.2	chr10	65022873	65022994	(68774428)	C	L1MC	LINE/L1	(946)	5200	5072	464183
1803	21.5	0.8	2.2	chr10	65022995	65023394	(68774028)	C	MSTD	LTR/ERVL-MaLR	(0)	396	3	464184
5925	23.4	7.6	4.2	chr10	65023395	65025277	(68772145)	C	L1MC	LINE/L1	(1075)	5071	3123	464183
1250	23.7	6.3	7.2	chr10	65126913	65127312	(68670110)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	464298
34	24.0	2.1	5.6	chr10	67884874	67885014	(65912408)	+	(CGGCGG)n	Simple_repeat	1	144	(0)	468131
20	24.9	1.8	0.0	chr10	67885083	67885139	(65912283)	+	(ACG)n	Simple_repeat	1	58	(0)	468132
424	32.5	7.4	2.4	chr10	68163892	68164096	(65633326)	C	MLT1L	LTR/ERVL-MaLR	(375)	235	20	468639
1794	16.5	7.4	3.7	chr10	68164101	68164478	(65632944)	C	MSTD	LTR/ERVL-MaLR	(3)	393	1	468640
11854	10.0	0.3	0.2	chr10	68277095	68278673	(65518749)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	468837
2245	13.3	8.9	3.2	chr10	69688251	69688653	(64108769)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	472067
1596	16.3	17.3	0.6	chr10	70124891	70125218	(63672204)	+	MSTD	LTR/ERVL-MaLR	3	396	(0)	472788
24	15.6	5.9	2.8	chr10	71212860	71212927	(62584495)	+	(GGC)n	Simple_repeat	1	72	(0)	474802
13	12.2	3.7	0.0	chr10	71213015	71213041	(62584381)	+	(GCT)n	Simple_repeat	1	28	(0)	474803
2484	11.3	8.9	2.5	chr10	71632831	71633097	(62164325)	C	MSTC	LTR/ERVL-MaLR	(0)	428	139	475645
28	5.9	0.0	0.0	chr10	71633098	71633133	(62164289)	+	(CCATTAAT)n	Simple_repeat	1	36	(0)	475646
2484	11.3	8.9	2.5	chr10	71633134	71633265	(62164157)	C	MSTC	LTR/ERVL-MaLR	(290)	138	2	475645
18	7.7	0.0	0.0	chr10	71964327	71964354	(61833068)	+	(GAG)n	Simple_repeat	1	28	(0)	476261
193	33.5	9.7	5.1	chr10	73252891	73253107	(60544315)	C	L2b	LINE/L2	(59)	3316	3089	478926
19	14.5	0.0	2.5	chr10	75283706	75283745	(58513677)	+	GA-rich	Low_complexity	1	40	(0)	482823
2371	15.1	0.3	0.0	chr10	77703907	77704256	(56093166)	+	MLT1A0	LTR/ERVL-MaLR	3	353	(12)	486446
1542	20.3	11.9	0.0	chr10	80180758	80181106	(53616316)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	490803
1927	15.7	0.0	3.7	chr10	80181169	80181492	(53615930)	+	AluJb	SINE/Alu	1	312	(0)	490804
2054	15.9	8.1	0.0	chr10	80334451	80334814	(53462608)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	491044
1697	19.3	5.5	1.5	chr10	80354557	80354911	(53442511)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	491078
321	35.5	8.7	6.6	chr10	80354916	80355217	(53442205)	C	L2b	LINE/L2	(91)	3284	2976	491076
2766	14.8	3.4	7.8	chr10	80590716	80591293	(53206129)	C	L1MB7	LINE/L1	(19)	6663	6112	491475
1861	16.4	4.3	5.5	chr10	80591294	80591505	(53205917)	C	MSTC	LTR/ERVL-MaLR	(0)	428	219	491476
2151	11.6	2.3	0.0	chr10	80591506	80591799	(53205623)	C	AluSx	SINE/Alu	(11)	301	1	491477
6124	25.9	4.5	5.8	chr10	83591773	83593326	(50204096)	C	L1M4a2	LINE/L1	(174)	2482	969	495591
18	24.2	4.2	5.0	chr10	86377301	86377396	(47420026)	+	(CGCAGG)n	Simple_repeat	1	100	(0)	499385
961	23.1	6.0	0.8	chr10	86377574	86377809	(47419613)	C	MIR	SINE/MIR	(3)	259	11	499386
18	20.3	2.2	0.0	chr10	86521644	86521688	(47275734)	+	(GCC)n	Simple_repeat	1	46	(0)	499653
14	13.2	2.9	2.8	chr10	86521953	86521987	(47275435)	+	G-rich	Low_complexity	1	36	(0)	499654
8309	19.6	8.2	3.8	chr10	87834016	87836125	(45961297)	C	L1MEf	LINE/L1	(2218)	4326	2070	501887
904	14.9	6.7	0.7	chr10	87836126	87836279	(45961143)	C	AluJr4	SINE/Alu	(12)	300	137	501891
5485	23.6	4.1	4.0	chr10	87836280	87838244	(45959178)	C	L1MEf	LINE/L1	(4571)	2069	65	501887
1376	19.0	17.1	0.3	chr10	88956759	88957085	(44840337)	C	MSTD	LTR/ERVL-MaLR	(3)	393	1	503621
1824	19.6	9.6	1.4	chr10	89635201	89635563	(44161859)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	504709
3284	22.2	3.7	2.7	chr10	89635569	89636316	(44161106)	C	MSTD-int	LTR/ERVL-MaLR	(6)	1729	974	504709
13	19.7	0.0	8.9	chr10	90404395	90404434	(43392988)	+	A-rich	Low_complexity	1	37	(0)	505796
1086	19.6	19.9	2.1	chr10	90404435	90404768	(43392654)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	505797
303	33.9	2.6	0.9	chr10	90872259	90872371	(42925051)	C	MIR3	SINE/MIR	(46)	162	48	506458
438	34.0	1.5	4.8	chr10	91112159	91112368	(42685054)	C	MIRb	SINE/MIR	(20)	248	46	506807
1974	19.7	2.6	2.6	chr10	91112517	91112906	(42684516)	C	MSTD	LTR/ERVL-MaLR	(6)	390	1	506808
1239	17.5	17.9	3.1	chr10	91201110	91201469	(42595953)	C	MSTC	LTR/ERVL-MaLR	(0)	428	4	506964
22	25.9	6.1	2.5	chr10	91220482	91220596	(42576826)	+	(GGC)n	Simple_repeat	1	122	(0)	506997
13	13.0	0.0	9.8	chr10	91220793	91220833	(42576589)	+	(CGG)n	Simple_repeat	1	41	(0)	506998
15	27.3	3.1	1.5	chr10	91798701	91798764	(41998658)	+	(GCCGCG)n	Simple_repeat	1	66	(0)	507864
2377	7.1	1.6	0.0	chr10	92412624	92412920	(41384502)	C	AluSp	SINE/Alu	(11)	302	1	509068
5144	24.6	6.1	6.8	chr10	92412921	92412958	(41384464)	C	MER21-int	LTR/ERVL	(1582)	2609	2575	509060
2869	17.7	2.3	9.3	chr10	92412959	92413617	(41383805)	C	LTR9	LTR/ERV1	(0)	612	1	509069
2124	11.6	0.7	1.6	chr10	92589912	92590214	(41207208)	+	AluSx1	SINE/Alu	1	300	(12)	509464
627	27.8	7.2	5.8	chr10	92590215	92590359	(41207063)	C	L2a	LINE/L2	(238)	3188	3038	509463
12	20.7	0.0	2.9	chr10	93073896	93073930	(40723492)	+	(GGC)n	Simple_repeat	1	35	(0)	510399
12	22.4	3.5	5.1	chr10	93073949	93074005	(40723417)	+	(GCT)n	Simple_repeat	1	59	(0)	510400
1880	17.2	8.8	0.8	chr10	93153557	93153920	(40643502)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	510550
1564	19.9	13.6	1.2	chr10	95456247	95456592	(38340830)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	514299
1751	18.1	10.6	1.7	chr10	95657715	95658074	(38139348)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	514691
250	26.3	3.8	2.6	chr10	95658111	95658188	(38139234)	C	L2c	LINE/L2	(92)	3295	3217	514692
417	31.1	10.0	0.9	chr10	95762591	95762817	(38034605)	C	L1M5	LINE/L1	(341)	5783	5534	514864
269	27.8	1.1	3.2	chr10	95767740	95767809	(38029613)	C	L1MB8	LINE/L1	(4798)	1698	1629	514869
1705	16.9	12.9	0.9	chr10	95767810	95768155	(38029267)	+	MSTD	LTR/ERVL-MaLR	1	394	(2)	514875
440	30.0	16.9	1.4	chr10	95768156	95768412	(38029010)	C	L1MB8	LINE/L1	(4868)	1628	1331	514869
2540	23.5	5.1	3.0	chr10	95996419	95996781	(37800641)	C	L1ME3E	LINE/L1	(23)	6219	5831	515228
1559	19.9	7.8	1.8	chr10	95996782	95997164	(37800258)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	515229
2540	23.5	5.1	3.0	chr10	95997165	95997349	(37800073)	C	L1ME3E	LINE/L1	(412)	5830	5655	515228
234	14.3	0.0	0.0	chr10	96930558	96930599	(36866823)	C	L1MEf	LINE/L1	(4605)	1595	1554	516997
1330	13.2	20.1	2.4	chr10	96930653	96930986	(36866436)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	516998
234	31.3	7.0	2.9	chr10	97195873	97196010	(36601412)	C	MIRb	SINE/MIR	(91)	177	34	517431
358	26.5	3.3	1.7	chr10	97196669	97196787	(36600635)	C	MIR3	SINE/MIR	(25)	183	63	517432
2530	5.5	0.3	0.0	chr10	97303708	97303999	(36493423)	+	AluY	SINE/Alu	1	293	(18)	517673
2249	13.1	8.7	10.3	chr10	97304000	97304228	(36493194)	+	MSTC	LTR/ERVL-MaLR	211	424	(4)	517669
437	28.9	3.8	0.7	chr10	97497898	97498050	(36299372)	+	MIRc	SINE/MIR	3	160	(108)	518102
205	28.9	10.1	1.1	chr10	99732610	99732728	(34064694)	+	MIR	SINE/MIR	31	165	(103)	522006
191	18.3	0.0	13.4	chr10	99732825	99732906	(34064516)	C	MIRc	SINE/MIR	(163)	105	35	522007
13	14.2	3.2	0.0	chr10	101354262	101354292	(32443130)	+	(GGCGCT)n	Simple_repeat	1	32	(0)	524954
373	24.2	10.8	2.2	chr10	101841582	101841718	(31955704)	C	MIRc	SINE/MIR	(68)	200	59	525773
1371	7.6	0.0	6.1	chr10	102854662	102854859	(30942563)	+	AluSp	SINE/Alu	32	217	(96)	527720
1399	25.6	10.6	6.3	chr10	103025568	103025864	(30771558)	C	Tigger13a	DNA/TcMar-Tigger	(146)	625	320	528101
1787	16.1	10.9	0.8	chr10	103025865	103026220	(30771202)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	528107
1399	25.6	10.6	6.3	chr10	103026221	103026317	(30771105)	C	Tigger13a	DNA/TcMar-Tigger	(452)	319	210	528101
606	30.2	2.5	1.7	chr10	103193688	103193923	(30603499)	+	MIR	SINE/MIR	15	252	(10)	528388
318	32.5	3.0	10.6	chr10	103686544	103686658	(30110764)	C	MIRb	SINE/MIR	(24)	244	140	529431
1264	26.8	3.0	6.3	chr10	103686659	103686745	(30110677)	+	MLT2C1	LTR/ERVL	1	83	(314)	529432
12	26.1	0.0	4.1	chr10	103966960	103967008	(29830414)	+	(CACCCCG)n	Simple_repeat	1	49	(0)	529996
2055	15.2	7.1	1.3	chr10	104092046	104092418	(29705004)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	530159
182	33.1	7.1	10.3	chr10	106766906	106767080	(27030342)	C	L2c	LINE/L2	(309)	3078	2910	534249
2557	11.2	9.6	0.5	chr10	110631539	110631925	(23165497)	+	MSTC	LTR/ERVL-MaLR	1	426	(2)	539898
2178	13.4	11.2	2.6	chr10	110676964	110677310	(23120112)	C	MSTC	LTR/ERVL-MaLR	(0)	428	69	539973
24	9.6	0.0	6.0	chr10	110919593	110919642	(22877780)	+	GA-rich	Low_complexity	1	50	(0)	540373
614	29.8	11.5	7.9	chr10	113330449	113330778	(20466644)	C	L2a	LINE/L2	(600)	2819	2492	544138
1230	14.8	20.3	2.2	chr10	113330877	113331153	(20466269)	C	MSTD	LTR/ERVL-MaLR	(0)	408	69	544141
1926	15.5	0.0	1.0	chr10	113549576	113549872	(20247550)	+	AluJb	SINE/Alu	11	304	(8)	544511
1794	17.6	8.1	0.8	chr10	114418371	114418737	(19378685)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	545906
264	34.9	6.3	2.1	chr10	114418951	114419163	(19378259)	+	MIRb	SINE/MIR	27	258	(10)	545907
13	12.7	2.6	5.1	chr10	114877440	114877477	(18919945)	+	(AATTAT)n	Simple_repeat	1	39	(0)	546675
2007	7.2	5.5	1.5	chr10	115435030	115435292	(18362130)	C	AluY	SINE/Alu	(11)	300	27	547438
1350	20.1	13.4	5.2	chr10	115435293	115435573	(18361849)	+	MSTD	LTR/ERVL-MaLR	80	396	(0)	547437
231	12.5	0.0	0.0	chr10	117705454	117705485	(16091937)	+	MSTC	LTR/ERVL-MaLR	2	33	(395)	550931
1725	15.4	1.4	0.4	chr10	117705483	117705755	(16091667)	+	MSTC	LTR/ERVL-MaLR	153	428	(0)	550931
696	29.0	10.6	5.0	chr10	120232002	120232127	(13565295)	C	LTR16C	LTR/ERVL	(8)	481	344	555330
1172	15.4	23.5	4.9	chr10	120232128	120232455	(13564967)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	555331
696	29.0	10.6	5.0	chr10	120232456	120232771	(13564651)	C	LTR16C	LTR/ERVL	(146)	343	11	555330
1839	16.4	6.9	10.9	chr10	120484311	120484721	(13312701)	C	MSTD	LTR/ERVL-MaLR	(0)	396	4	555722
1039	21.3	12.2	8.8	chr10	121096839	121097224	(12700198)	C	MLT1H	LTR/ERVL-MaLR	(60)	489	89	556636
1879	18.1	5.6	15.5	chr10	121402744	121402834	(12394588)	+	L1MEc	LINE/L1	5247	5250	(1069)	557086
1817	17.5	4.1	0.6	chr10	121402835	121403184	(12394238)	C	MLT1A0	LTR/ERVL-MaLR	(2)	363	1	557099
1879	18.1	5.6	15.5	chr10	121403185	121403380	(12394042)	+	L1MEc	LINE/L1	5251	5444	(875)	557086
13	24.1	4.8	3.1	chr10	121927973	121928034	(11869388)	+	(GCC)n	Simple_repeat	1	65	(0)	557959
12	22.3	8.8	0.0	chr10	121928210	121928266	(11869156)	+	G-rich	Low_complexity	1	62	(0)	557960
275	19.5	5.8	0.5	chr10	121928615	121928690	(11868732)	C	MIRc	SINE/MIR	(72)	158	81	557961
18	10.5	0.0	0.0	chr10	121975069	121975099	(11822323)	+	(GGGAGC)n	Simple_repeat	1	31	(0)	558054
14	15.2	0.0	7.1	chr10	121975098	121975152	(11822270)	+	(GGCCGC)n	Simple_repeat	1	51	(0)	558055
12	24.2	3.5	3.4	chr10	121975232	121975288	(11822134)	+	(GCGCCA)n	Simple_repeat	1	59	(0)	558056
2913	11.8	2.6	0.0	chr10	122146345	122146761	(11650661)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	558417
3653	15.4	3.2	3.0	chr10	122146762	122147151	(11650271)	C	L1MC3	LINE/L1	(183)	7602	7206	558416
13	14.0	4.7	4.4	chr10	122374765	122374807	(11422615)	+	(GCCGCG)n	Simple_repeat	1	45	(0)	558776
39	0.0	0.0	0.0	chr10	122980724	122980759	(10816663)	+	(GCGGG)n	Simple_repeat	1	36	(0)	559574
765	22.4	21.8	7.3	chr10	123507334	123507650	(10289772)	C	MER57B2	LTR/ERV1	(58)	376	1	560429
1028	18.6	9.2	3.0	chr10	123507652	123507884	(10289538)	+	MSTC	LTR/ERVL-MaLR	180	428	(0)	560427
652	19.7	6.6	0.0	chr10	123507888	123508029	(10289393)	C	MLT1G1	LTR/ERVL-MaLR	(380)	199	48	560425
2623	14.4	2.6	5.7	chr10	124178219	124178660	(9618762)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	561481
686	27.6	7.3	4.3	chr10	124458907	124459292	(9338130)	+	MLT1J	LTR/ERVL-MaLR	206	603	(7)	561958
190	26.6	0.0	13.5	chr10	124459386	124459416	(9338006)	C	MIR1_Amn	SINE/MIR	(79)	151	127	561971
2419	17.1	6.8	4.5	chr10	124459417	124459905	(9337517)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	5	561972
49	27.0	2.6	2.6	chr10	125160575	125160764	(8636658)	+	(CTCCC)n	Simple_repeat	1	195	(0)	563052
12	4.3	8.3	0.0	chr10	125161036	125161059	(8636363)	+	(TCGC)n	Simple_repeat	1	26	(0)	563053
16	15.3	0.0	5.0	chr10	125161208	125161247	(8636175)	+	(GCGG)n	Simple_repeat	1	40	(0)	563054
5791	11.8	5.1	4.4	chr10	125267474	125268437	(8528985)	C	L1MA4A	LINE/L1	(0)	6303	5331	563242
2479	7.5	0.0	0.3	chr10	125268438	125268742	(8528680)	C	AluY	SINE/Alu	(7)	304	1	563243
5791	13.9	2.5	2.9	chr10	125268743	125269144	(8528278)	C	L1MA4A	LINE/L1	(973)	5330	4919	563242
209	27.8	3.6	0.0	chr10	125284661	125284714	(8512708)	+	L2c	LINE/L2	3108	3163	(224)	563271
613	26.4	11.1	3.1	chr10	125284797	125285225	(8512197)	C	MLT1J	LTR/ERVL-MaLR	(4)	508	6	563272
19	17.8	1.0	3.9	chr10	125352552	125352607	(8444815)	+	A-rich	Low_complexity	1	54	(0)	563391
2035	17.5	4.5	1.1	chr10	125352656	125353036	(8444386)	C	MSTD	LTR/ERVL-MaLR	(1)	395	1	563392
2381	15.5	2.6	7.2	chr10	125645216	125645660	(8151762)	+	MSTC	LTR/ERVL-MaLR	1	424	(4)	563829
2320	15.6	1.0	1.8	chr10	126770855	126771253	(7026169)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	565289
329	33.3	0.0	0.8	chr10	126771358	126771484	(7025938)	C	L1M5	LINE/L1	(1293)	4921	4796	565290
2240	17.5	3.4	3.1	chr10	127894751	127895164	(5902258)	C	MSTC	LTR/ERVL-MaLR	(0)	428	14	566775
451	28.5	5.2	0.0	chr10	128987739	128987903	(4809519)	+	MER103C	DNA/hAT-Charlie	69	242	(55)	568026
2195	16.8	5.3	2.1	chr10	128987920	128988302	(4809120)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	568027
365	24.3	17.4	0.0	chr10	131691042	131691193	(2106229)	+	MER5A	DNA/hAT-Charlie	6	189	(0)	570829
1315	20.6	5.5	9.6	chr10	132434354	132434769	(1362653)	+	MLT2D	LTR/ERVL	1	525	(31)	571637
952	23.1	1.4	0.5	chr10	132696432	132696649	(1100773)	+	L1MC2	LINE/L1	5931	6150	(369)	571910
30	7.5	0.0	0.0	chr10	132965825	132965867	(831555)	+	(GTGTTTACAT)n	Simple_repeat	1	43	(0)	572085
13	3.7	10.7	0.0	chr10	133336882	133336909	(460513)	+	(GATGCG)n	Simple_repeat	1	31	(0)	572402
1995	8.2	8.2	0.0	chr10	133341425	133341693	(455729)	C	AluSc	SINE/Alu	(15)	294	2	572410
897	22.5	5.2	7.0	chr10	133341694	133341738	(455684)	C	L1M5	LINE/L1	(692)	5492	5463	572409
1631	17.6	4.7	4.7	chr10	133341743	133342124	(455298)	C	MLT1B	LTR/ERVL-MaLR	(8)	382	1	572411
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
8705	1.0	24.2	0.0	chr10	133785742	133787104	(10318)	+	TAR1	Satellite/telo	314	2111	(0)	572857
3202	14.2	5.9	1.4	chr11	189420	190371	(134896251)	C	TAR1	Satellite/telo	(1043)	995	1	573066
13	19.0	3.8	5.5	chr11	536088	536140	(134550482)	+	(CAC)n	Simple_repeat	1	55	(0)	573534
194	25.2	5.7	7.5	chr11	776627	776733	(134309889)	+	MIRb	SINE/MIR	26	130	(138)	573936
37	23.6	2.4	3.1	chr11	777157	777282	(134309340)	+	(CCCCCG)n	Simple_repeat	1	129	(0)	573937
1632	19.2	0.7	3.1	chr11	841425	841617	(134245005)	C	AluJb	SINE/Alu	(3)	309	126	574010
13	28.7	0.0	0.0	chr11	1017643	1017684	(134068938)	+	(TGG)n	Simple_repeat	1	42	(0)	574242
18	27.1	1.2	4.8	chr11	1338286	1338367	(133748255)	+	(CTC)n	Simple_repeat	1	83	(0)	574495
1832	13.3	11.6	1.8	chr11	1338406	1338748	(133747874)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	574496
839	26.0	9.3	0.0	chr11	3379577	3379857	(131706765)	C	MER33	DNA/hAT-Charlie	(14)	310	1	576929
902	18.2	10.2	2.9	chr11	3386617	3386825	(131699797)	C	MSTD	LTR/ERVL-MaLR	(0)	408	183	576945
528	24.8	6.8	7.1	chr11	3387009	3387153	(131699469)	+	SATR1	Satellite	16	175	(248)	576946
1635	19.9	10.1	0.0	chr11	6293441	6293796	(128792826)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	581085
538	25.4	8.9	6.2	chr11	6293803	6294044	(128792578)	C	LTR78	LTR/ERV1	(30)	1274	1042	581086
1049	21.2	17.3	4.4	chr11	6722845	6723185	(128363437)	+	MSTD	LTR/ERVL-MaLR	3	396	(0)	581715
16	11.0	7.7	0.0	chr11	7252022	7252060	(127834562)	+	(GGCTCG)n	Simple_repeat	1	42	(0)	582444
11	20.5	5.1	0.0	chr11	9461144	9461182	(125625440)	+	(CGGCTC)n	Simple_repeat	1	41	(0)	585847
2233	17.2	1.8	4.0	chr11	11152304	11152708	(123933914)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	588749
258	26.7	9.6	5.1	chr11	11247916	11247994	(123838628)	+	LTR16E2	LTR/ERVL	1	83	(485)	588889
1092	19.3	10.4	2.9	chr11	11248001	11248327	(123838295)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	588890
19	25.9	0.0	1.8	chr11	11841953	11842009	(123244613)	+	(GGC)n	Simple_repeat	1	57	(0)	589842
1794	18.0	8.0	0.6	chr11	11974337	11974682	(123111940)	C	MSTD	LTR/ERVL-MaLR	(2)	394	21	590016
224	29.0	10.3	1.5	chr11	14891180	14891312	(120195310)	+	MIR	SINE/MIR	95	240	(22)	594636
14	24.0	0.0	0.0	chr11	14891684	14891722	(120194900)	+	(GGAGCA)n	Simple_repeat	1	39	(0)	594637
12	20.8	6.8	0.0	chr11	14891919	14891962	(120194660)	+	(GGCCC)n	Simple_repeat	1	47	(0)	594638
1949	17.0	3.4	7.1	chr11	15049302	15049694	(120036928)	C	MSTD	LTR/ERVL-MaLR	(16)	380	3	594872
1204	21.4	6.1	9.8	chr11	17192854	17193263	(117893359)	+	MSTD	LTR/ERVL-MaLR	3	396	(0)	598248
1397	15.8	3.8	3.3	chr11	20663848	20664093	(114422529)	C	MSTC	LTR/ERVL-MaLR	(14)	414	113	604303
28	5.9	0.0	0.0	chr11	20664094	20664129	(114422493)	+	(TAATCCAT)n	Simple_repeat	1	36	(0)	604304
1404	24.2	5.0	2.3	chr11	22196084	22196468	(112890154)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	606585
501	35.2	8.3	5.9	chr11	22201220	22201524	(112885098)	C	L2c	LINE/L2	(0)	3387	3076	606593
1878	20.1	3.0	0.5	chr11	22201525	22201910	(112884712)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	606594
1780	20.8	4.3	0.3	chr11	25881307	25881686	(109204936)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	611645
1924	22.6	10.4	4.4	chr11	26971718	26972443	(108114179)	C	L1ME1	LINE/L1	(2)	6350	5576	613225
1687	17.4	3.9	12.6	chr11	26972444	26972896	(108113726)	C	MSTC	LTR/ERVL-MaLR	(0)	428	17	613226
277	23.7	11.9	7.1	chr11	27362519	27362645	(107723977)	+	Charlie4z	DNA/hAT-Charlie	31	164	(3)	613837
18	27.4	4.0	0.0	chr11	27362890	27362963	(107723659)	+	(TCATCG)n	Simple_repeat	1	77	(0)	613838
12	17.7	3.1	0.0	chr11	27363015	27363046	(107723576)	+	(GCGGCA)n	Simple_repeat	1	33	(0)	613839
449	32.2	11.5	5.0	chr11	28623781	28624143	(106462479)	C	MLT1K	LTR/ERVL-MaLR	(201)	394	5	615808
1396	21.5	7.1	4.7	chr11	28624255	28624487	(106462135)	C	MSTD	LTR/ERVL-MaLR	(0)	396	149	615809
2492	7.9	0.0	1.3	chr11	28624488	28624802	(106461820)	C	AluY	SINE/Alu	(0)	311	1	615810
924	14.3	1.3	0.0	chr11	32263343	32263489	(102823133)	C	MSTD	LTR/ERVL-MaLR	(0)	396	248	621275
1688	14.6	1.4	0.0	chr11	32263492	32263772	(102822850)	+	MER49	LTR/ERV1	1	285	(638)	621276
1345	23.2	0.3	4.4	chr11	32263803	32264162	(102822460)	+	MER49	LTR/ERV1	549	893	(10)	621276
23	25.9	4.8	1.8	chr11	35943954	35944057	(99142565)	+	G-rich	Low_complexity	1	109	(0)	627608
33	0.0	0.0	0.0	chr11	35944174	35944204	(99142418)	+	(CGCGGGG)n	Simple_repeat	1	31	(0)	627609
1957	19.8	1.3	3.0	chr11	36512906	36513306	(98573316)	+	MSTD	LTR/ERVL-MaLR	3	396	(0)	628553
12	16.3	2.8	2.7	chr11	45147136	45147171	(89939451)	+	(CTCCTCG)n	Simple_repeat	1	37	(0)	641574
13	13.5	6.1	0.0	chr11	45147283	45147315	(89939307)	+	(GACGCG)n	Simple_repeat	1	35	(0)	641575
3909	12.4	8.7	1.7	chr11	46015485	46015895	(89070727)	C	Tigger3b	DNA/TcMar-Tigger	(463)	768	344	643157
46	0.0	0.0	0.0	chr11	46015896	46015937	(89070685)	+	(ATCT)n	Simple_repeat	1	42	(0)	643160
3909	12.4	8.7	1.7	chr11	46015938	46016230	(89070392)	C	Tigger3b	DNA/TcMar-Tigger	(888)	343	11	643157
1650	18.9	9.3	1.3	chr11	46042599	46042973	(89043649)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	643197
15	27.4	1.4	4.2	chr11	46936912	46936982	(88149640)	+	G-rich	Low_complexity	1	72	(0)	644940
2308	11.3	0.3	0.0	chr11	48071903	48072204	(87014418)	C	AluSx1	SINE/Alu	(9)	303	1	647504
1263	18.9	18.1	5.7	chr11	48072205	48072505	(87014117)	C	MLT1A1	LTR/ERVL-MaLR	(49)	359	4	647501
14	29.7	1.6	1.6	chr11	57668442	57668504	(77418118)	+	(CCCTGCG)n	Simple_repeat	1	64	(0)	654241
14	12.5	0.0	0.0	chr11	58579456	58579481	(76507141)	+	(GCC)n	Simple_repeat	1	26	(0)	655688
880	21.6	1.1	0.6	chr11	60584624	60584795	(74501827)	C	MSTD	LTR/ERVL-MaLR	(0)	396	224	658551
1790	9.9	14.6	0.0	chr11	60584796	60585047	(74501575)	+	AluY	SINE/Alu	1	295	(16)	658552
15	9.9	2.8	5.4	chr11	61580858	61580893	(73505729)	+	(GCC)n	Simple_repeat	1	37	(0)	660441
3808	19.0	6.6	2.1	chr11	62118068	62118417	(72968205)	C	Cheshire	DNA/hAT-Charlie	(2040)	380	1	661529
2206	13.4	0.9	2.8	chr11	62118453	62118806	(72967816)	C	MSTC	LTR/ERVL-MaLR	(0)	428	82	661536
1365	9.9	0.0	6.1	chr11	62840903	62841036	(72245586)	+	AluSc8	SINE/Alu	1	130	(181)	662920
2337	9.2	0.0	0.3	chr11	62841037	62841341	(72245281)	+	AluSc	SINE/Alu	1	304	(5)	662921
1365	9.9	0.0	6.1	chr11	62841342	62841418	(72245204)	+	AluSc8	SINE/Alu	131	199	(112)	662920
2183	16.3	0.9	0.3	chr11	63572370	63572713	(71513909)	+	MSTC	LTR/ERVL-MaLR	77	422	(6)	663905
607	15.7	5.7	3.3	chr11	63680535	63680655	(71405967)	C	FLAM_A	SINE/Alu	(10)	132	9	664162
1975	17.2	7.1	0.5	chr11	63921887	63922254	(71164368)	+	MSTD	LTR/ERVL-MaLR	3	396	(0)	664651
12	16.4	5.9	0.0	chr11	64355142	64355175	(70731447)	+	(CCTCC)n	Simple_repeat	1	36	(0)	665458
1649	20.0	7.8	1.1	chr11	64398526	64398894	(70687728)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	665548
3207	28.2	2.9	2.0	chr11	64398895	64399098	(70687524)	+	ERVL-E-int	LTR/ERVL	2687	2886	(2781)	665547
816	17.3	5.5	1.7	chr11	64399149	64399324	(70687298)	C	MSTD	LTR/ERVL-MaLR	(58)	338	156	665549
874	27.8	3.6	6.2	chr11	64399334	64399598	(70687024)	+	ERVL-E-int	LTR/ERVL	3041	3288	(2426)	665547
1683	21.1	3.0	1.3	chr11	64532374	64532762	(70553860)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	665803
266	16.4	3.5	0.0	chr11	64847419	64847473	(70239149)	+	MIRc	SINE/MIR	63	119	(149)	666329
2219	7.3	3.4	1.1	chr11	65447368	65447654	(69638968)	+	AluSz	SINE/Alu	5	298	(14)	667545
1023	18.1	20.9	2.5	chr11	65447663	65447793	(69638829)	C	MLT1A1	LTR/ERVL-MaLR	(59)	349	158	667546
2128	12.2	0.3	1.7	chr11	65447794	65448095	(69638527)	C	AluSc	SINE/Alu	(11)	298	1	667547
12	15.7	2.6	5.0	chr11	65888566	65888604	(69198018)	+	G-rich	Low_complexity	1	40	(0)	668355
11	28.4	0.0	0.0	chr11	66479958	66479996	(68606626)	+	(CAAGTCC)n	Simple_repeat	1	39	(0)	669605
685	21.2	9.4	0.0	chr11	67508964	67509147	(67577475)	+	MIR	SINE/MIR	10	212	(50)	671764
105	1.9	1.9	0.0	chr11	67583298	67583405	(67503217)	+	(ATAAA)n	Simple_repeat	1	110	(0)	671936
2275	15.8	4.6	0.0	chr11	69515901	69516306	(65570316)	C	MSTB	LTR/ERVL-MaLR	(24)	402	1	675211
1226	13.7	0.5	1.6	chr11	69516307	69516496	(65570126)	+	MSTC	LTR/ERVL-MaLR	241	428	(0)	675210
1069	23.6	13.1	5.9	chr11	70371122	70371431	(64715191)	C	L1MD	LINE/L1	(3227)	2919	2548	676745
616	22.2	3.5	4.0	chr11	70371541	70371742	(64714880)	C	L1M4	LINE/L1	(3463)	2683	2483	676741
5954	11.2	1.2	2.3	chr11	71160994	71161903	(63924719)	+	MER4D1	LTR/ERV1	1	900	(0)	677800
685	31.8	8.0	2.3	chr11	71161904	71162055	(63924567)	C	Tigger9a	DNA/TcMar-Tigger	(367)	365	205	677799
407	31.4	11.0	4.0	chr11	71162101	71162129	(63924493)	+	L1ME3E	LINE/L1	5722	5748	(494)	677795
1284	18.6	17.3	4.1	chr11	71162130	71162498	(63924124)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	677801
2113	20.4	0.8	0.5	chr11	72974097	72974490	(62112132)	C	MSTD	LTR/ERVL-MaLR	(1)	395	1	680959
1068	23.3	11.1	4.3	chr11	73208818	73209185	(61877437)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	681399
2177	17.5	2.0	2.3	chr11	73470400	73470796	(61615826)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	681913
2495	9.7	1.3	0.0	chr11	73473811	73474108	(61612514)	C	AluSx1	SINE/Alu	(9)	303	2	681921
1089	28.6	1.3	4.0	chr11	73474109	73474119	(61612503)	+	L2a	LINE/L2	3211	3221	(205)	681920
1067	12.9	6.6	0.0	chr11	73474129	73474298	(61612324)	C	MSTD	LTR/ERVL-MaLR	(0)	396	215	681922
946	18.4	0.0	0.0	chr11	73474330	73474470	(61612152)	C	FAM	SINE/Alu	(13)	172	32	681923
668	21.9	0.6	0.6	chr11	73474477	73474635	(61611987)	C	MSTD	LTR/ERVL-MaLR	(239)	169	6	681922
822	20.7	3.5	4.9	chr11	75333561	75333763	(59752859)	C	MIRb	SINE/MIR	(14)	254	55	685817
1876	10.1	8.9	0.0	chr11	75334050	75334326	(59752296)	+	AluSg	SINE/Alu	1	304	(6)	685818
1479	13.7	9.1	6.2	chr11	75838706	75839024	(59247598)	+	MSTC	LTR/ERVL-MaLR	8	325	(103)	686882
793	13.7	13.9	0.5	chr11	75839025	75839229	(59247393)	C	L1ME4b	LINE/L1	(653)	239	3	686880
2110	16.5	3.5	0.8	chr11	77403794	77404178	(57682444)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	689797
1251	31.5	18.2	2.3	chr11	77404179	77404261	(57682361)	+	L2a	LINE/L2	1380	1492	(1927)	689796
2432	9.5	0.3	0.0	chr11	77404262	77404566	(57682056)	C	AluSx	SINE/Alu	(6)	306	1	689798
1485	17.6	11.1	5.1	chr11	80080096	80080466	(55006156)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	695144
230	30.0	5.2	7.6	chr11	80080467	80080575	(55006047)	C	L2b	LINE/L2	(16)	3359	3252	695145
248	30.1	2.5	6.6	chr11	80857121	80857334	(54229288)	C	MLT1K	LTR/ERVL-MaLR	(8)	587	331	696489
1594	20.8	8.5	0.9	chr11	80857339	80857687	(54228935)	C	MSTD	LTR/ERVL-MaLR	(16)	380	3	696490
283	29.3	6.8	5.1	chr11	81018813	81018970	(54067652)	C	L1MC5a	LINE/L1	(1961)	816	656	696773
1274	19.2	18.8	0.6	chr11	81018972	81019301	(54067321)	+	MLT1A1	LTR/ERVL-MaLR	1	404	(4)	696774
364	34.9	10.7	2.2	chr11	83195475	83195840	(51890782)	+	L2c	LINE/L2	2358	2758	(661)	700223
2315	8.8	1.0	0.3	chr11	83195846	83196141	(51890481)	C	AluY	SINE/Alu	(13)	298	1	700224
2264	29.2	5.4	10.5	chr11	86261101	86262449	(48824173)	C	MSTD-int	LTR/ERVL-MaLR	(138)	1597	322	705251
475	18.9	0.0	3.8	chr11	86262450	86262555	(48824067)	C	AluSz6	SINE/Alu	(3)	309	208	705252
297	22.6	0.0	0.0	chr11	86262556	86262608	(48824014)	+	MSTD	LTR/ERVL-MaLR	236	288	(108)	705253
1448	14.1	0.5	0.0	chr11	86262611	86262809	(48823813)	C	AluJb	SINE/Alu	(112)	200	1	705254
1853	17.1	3.0	0.0	chr11	86262814	86263105	(48823517)	C	AluJr	SINE/Alu	(11)	301	1	705255
871	19.9	0.0	0.0	chr11	86263544	86263679	(48822943)	C	AluJr4	SINE/Alu	(175)	137	2	705256
796	21.0	7.4	2.4	chr11	86263680	86263991	(48822631)	C	MSTD	LTR/ERVL-MaLR	(43)	353	1	705251
7270	17.6	2.4	3.7	chr11	87919224	87920880	(47165742)	C	L1MA7	LINE/L1	(2106)	4037	2404	707819
992	25.2	9.5	0.8	chr11	87920881	87921140	(47165482)	C	MSTD	LTR/ERVL-MaLR	(0)	396	112	707820
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
18300	3.7	0.3	0.1	chr11	94238529	94241278	(40845344)	C	L1PA4	LINE/L1	(372)	5782	3028	716863
1892	16.8	7.6	3.5	chr11	95645815	95646191	(39440431)	+	MSTD	LTR/ERVL-MaLR	3	396	(0)	718950
857	28.6	7.3	4.5	chr11	95646192	95646594	(39440028)	+	MamRep605	LTR?	72	487	(362)	718949
11260	18.4	2.9	2.8	chr11	95721649	95723616	(39363006)	+	L1MC3	LINE/L1	5430	7425	(360)	719054
1395	20.1	14.4	0.3	chr11	95723617	95723956	(39362666)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	719055
12	27.7	0.0	0.0	chr11	95789478	95789516	(39297106)	+	(TCC)n	Simple_repeat	1	39	(0)	719160
1111	18.5	7.0	1.8	chr11	96397884	96398200	(38688422)	+	MSTD	LTR/ERVL-MaLR	13	396	(0)	720083
928	25.6	3.7	3.5	chr11	96398201	96398534	(38688088)	+	MSTD-int	LTR/ERVL-MaLR	1	471	(1264)	720083
905	20.3	1.6	0.5	chr11	99828277	99828464	(35258158)	C	MSTD	LTR/ERVL-MaLR	(0)	396	207	724300
392	26.3	2.0	0.0	chr11	99828489	99828587	(35258035)	C	MSTD	LTR/ERVL-MaLR	(326)	102	2	724300
15	31.9	3.6	1.2	chr11	100687100	100687182	(34399440)	+	(GCGG)n	Simple_repeat	1	86	(0)	725359
14	7.1	2.9	5.7	chr11	100687445	100687478	(34399144)	+	(CGCGCC)n	Simple_repeat	1	35	(0)	725360
17283	13.8	3.8	3.5	chr11	102416216	102419177	(32667445)	+	L1PA15	LINE/L1	3819	6783	(2)	727899
270	27.4	2.3	10.5	chr11	102499526	102499668	(32586954)	C	MLT1J	LTR/ERVL-MaLR	(379)	133	3	728038
1409	19.1	3.5	4.9	chr11	102499714	102500000	(32586622)	C	MSTD	LTR/ERVL-MaLR	(0)	396	114	728039
551	22.3	0.0	0.0	chr11	102500002	102500113	(32586509)	C	MSTC	LTR/ERVL-MaLR	(316)	112	1	728040
17	14.4	0.0	4.8	chr11	110092915	110092956	(24993666)	+	(GCGG)n	Simple_repeat	1	42	(0)	739265
291	31.7	7.2	8.7	chr11	110558665	110558847	(24527775)	+	L2b	LINE/L2	3207	3386	(1)	740015
226	41.9	1.4	0.7	chr11	110558842	110558978	(24527644)	C	L2c	LINE/L2	(440)	2979	2842	740010
2087	12.5	2.3	1.0	chr11	110558990	110559286	(24527336)	C	AluSx	SINE/Alu	(10)	302	2	740016
405	35.0	0.0	1.6	chr11	111819771	111819895	(23266727)	+	L2b	LINE/L2	3253	3375	(0)	742011
291	22.9	0.0	0.0	chr11	111820076	111820123	(23266499)	C	MSTD	LTR/ERVL-MaLR	(102)	294	247	742012
2066	19.4	2.5	3.0	chr11	111820227	111820624	(23265998)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	742013
1802	9.7	13.3	0.4	chr11	113876316	113876584	(21210038)	C	AluSx	SINE/Alu	(3)	309	1	745306
2007	18.0	6.9	0.0	chr11	114225367	114225733	(20860889)	C	MSTD	LTR/ERVL-MaLR	(0)	396	3	745933
17	10.0	0.0	2.9	chr11	118925509	118925542	(16161080)	+	(GCCGGG)n	Simple_repeat	1	34	(0)	753866
19	14.9	0.0	0.0	chr11	118925585	118925621	(16161001)	+	(CTTG)n	Simple_repeat	1	37	(0)	753867
2293	11.5	0.0	0.0	chr11	119583841	119584136	(15502486)	+	AluSx	SINE/Alu	1	296	(16)	755128
2189	14.2	0.0	0.0	chr11	119593084	119593386	(15493236)	+	AluSx1	SINE/Alu	1	303	(9)	755143
739	23.7	4.9	4.7	chr11	119593387	119593726	(15492896)	C	MSTC	LTR/ERVL-MaLR	(39)	389	1	755144
374	16.0	0.0	0.0	chr11	119593729	119593778	(15492844)	+	AluYj4	SINE/Alu	1	50	(261)	755145
541	5.1	4.8	0.0	chr11	119593790	119593868	(15492754)	+	THE1D	LTR/ERVL-MaLR	105	187	(194)	755146
543	23.7	0.0	2.6	chr11	122414682	122414841	(12671781)	+	LTR49-int	LTR/ERV1	1667	1802	(4385)	759550
2687	13.6	3.2	6.9	chr11	122414880	122415585	(12671037)	+	LTR49-int	LTR/ERV1	1925	2603	(3584)	759550
24	25.7	4.4	3.4	chr11	122882875	122882987	(12203635)	+	(GGC)n	Simple_repeat	1	118	(0)	760399
198	36.5	6.5	1.7	chr11	123407764	123407880	(11678742)	C	L2b	LINE/L2	(0)	3375	3253	761488
1359	21.0	10.9	4.8	chr11	125246096	125246466	(9840156)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	764210
1008	19.2	10.1	2.6	chr11	129555857	129556178	(5530444)	+	MSTD	LTR/ERVL-MaLR	1	383	(13)	770480
1650	17.4	9.8	6.3	chr11	130558153	130558533	(4528089)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	772090
302	28.0	1.4	14.4	chr11	130847587	130847635	(4238987)	C	L3	LINE/CR1	(161)	3938	3890	772497
3241	19.0	10.9	0.8	chr11	130847636	130848293	(4238329)	+	MER44C	DNA/TcMar-Tigger	1	733	(0)	772498
278	31.5	13.3	4.3	chr11	134940391	134940606	(146016)	C	MIRb	SINE/MIR	(0)	268	28	777849
1921	15.7	21.1	1.1	chr11	135075695	135076563	(10059)	+	TAR1	Satellite/telo	1	1042	(938)	778016
548	2.3	1.2	1.4	chr12	10001	10585	(133264724)	+	(CTAACC)n	Simple_repeat	1	592	(0)	778084
4200	11.2	9.1	0.5	chr12	1056291	1056955	(132218354)	C	LTR9A1	LTR/ERV1	(0)	728	1	780015
820	27.3	23.9	0.5	chr12	1537240	1537768	(131737541)	+	L2a	LINE/L2	2273	2948	(471)	780824
859	28.4	5.8	2.1	chr12	1537764	1538044	(131737265)	+	L2a	LINE/L2	3134	3425	(1)	780824
1655	15.6	4.0	0.7	chr12	1538103	1538391	(131736918)	+	AluJr	SINE/Alu	1	299	(13)	780826
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
4091	30.2	2.7	0.7	chr12	2718594	2719789	(130555520)	+	ERVL-E-int	LTR/ERVL	1703	2881	(2786)	782539
356	32.0	4.9	8.3	chr12	2768157	2768397	(130506912)	+	L2c	LINE/L2	3071	3307	(80)	782615
200	13.2	2.6	2.6	chr12	2768385	2768423	(130506886)	+	L2c	LINE/L2	3269	3307	(80)	782616
189	15.8	2.6	2.6	chr12	2768432	2768470	(130506839)	+	L2c	LINE/L2	3269	3307	(80)	782616
270	25.4	2.6	10.2	chr12	2768479	2768605	(130506704)	+	L2c	LINE/L2	3269	3385	(2)	782617
17	22.3	0.0	8.2	chr12	3365982	3366054	(129909255)	+	(CCCCCG)n	Simple_repeat	1	73	(0)	783738
15	0.0	0.0	0.0	chr12	3420202	3420218	(129855091)	+	(CT)n	Simple_repeat	1	17	(0)	783822
416	18.5	0.0	8.9	chr12	3420279	3420379	(129854930)	+	MIRc	SINE/MIR	77	168	(100)	783823
1683	23.8	6.7	3.5	chr12	3797436	3797968	(129477341)	+	MER74B	LTR/ERVL	58	608	(14)	784431
726	22.5	22.5	4.4	chr12	3797969	3798289	(129477020)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	784432
4148	17.6	4.0	3.1	chr12	4666104	4666980	(128608329)	C	L1MB2	LINE/L1	(735)	5436	4550	785878
1354	18.6	16.9	3.4	chr12	4666981	4667331	(128607978)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	785880
4534	17.9	4.2	3.2	chr12	4667332	4667512	(128607797)	C	L1MB2	LINE/L1	(1591)	4549	4364	785878
3151	11.7	0.7	0.7	chr12	6423166	6423628	(126851681)	C	L1PB4	LINE/L1	(0)	6156	5694	788690
13	20.7	5.8	1.8	chr12	8698397	8698448	(124576861)	+	G-rich	Low_complexity	1	55	(0)	792748
3404	14.8	0.4	1.1	chr12	9686999	9687530	(123587779)	C	MER1A	DNA/hAT-Charlie	(0)	529	2	794177
300	22.6	5.1	4.1	chr12	13044135	13044231	(120231078)	C	MIRb	SINE/MIR	(69)	199	102	799300
2095	14.5	4.3	0.6	chr12	13220253	13220613	(120054696)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	799545
408	24.6	8.0	3.2	chr12	13404944	13405132	(119870177)	C	UCON86	LINE/L2	(102)	580	382	799808
2151	17.5	3.6	3.6	chr12	13622559	13622950	(119652359)	C	MSTD	LTR/ERVL-MaLR	(4)	392	1	800078
16	10.4	0.0	5.7	chr12	15882461	15882495	(117392814)	+	(CCCT)n	Simple_repeat	1	35	(0)	803443
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
1516	21.7	2.3	9.2	chr12	19659963	19660388	(113614921)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	808601
1403	14.8	18.6	4.3	chr12	20026981	20027327	(113247982)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	809117
1028	13.4	6.3	9.6	chr12	20027354	20027515	(113247794)	+	LTR9A1	LTR/ERV1	325	566	(162)	809118
1239	20.3	16.7	2.9	chr12	20514865	20515204	(112760105)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	809752
2312	9.6	0.0	1.7	chr12	22463105	22463405	(110811904)	+	AluSx1	SINE/Alu	1	296	(16)	812153
947	19.4	20.1	5.8	chr12	22463406	22463666	(110811643)	+	MLT1A1	LTR/ERVL-MaLR	88	407	(1)	812151
1435	17.4	12.6	7.2	chr12	22888608	22888980	(110386329)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	812837
1136	21.7	12.9	1.1	chr12	23758662	23759010	(109516299)	+	MLT1A1	LTR/ERVL-MaLR	1	396	(12)	814006
284	34.2	6.4	1.8	chr12	24072507	24072670	(109202639)	C	MIR3	SINE/MIR	(35)	173	2	814399
1767	18.2	6.8	3.9	chr12	25261623	25261955	(108013354)	+	MSTD	LTR/ERVL-MaLR	1	355	(41)	816218
2179	11.0	0.7	1.0	chr12	25261956	25262255	(108013054)	+	AluSx1	SINE/Alu	2	300	(12)	816219
1572	21.3	11.1	0.0	chr12	25472715	25473066	(107802243)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	816567
1525	14.9	16.0	11.7	chr12	26163399	26163784	(107111525)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	3	817596
2315	17.0	1.0	0.5	chr12	27419224	27419613	(105855696)	C	MSTD	LTR/ERVL-MaLR	(0)	396	5	819521
1346	21.3	12.1	6.0	chr12	29894777	29895146	(103380163)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	822997
6873	22.1	7.0	4.3	chr12	29895147	29896828	(103378481)	C	MSTD-int	LTR/ERVL-MaLR	(0)	1735	4	822997
897	20.2	1.1	0.0	chr12	29984984	29985156	(103290153)	C	L1MC1	LINE/L1	(0)	6333	6159	823106
1358	26.4	6.3	1.3	chr12	29985157	29985532	(103289777)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	823107
1865	18.2	5.6	0.8	chr12	30003616	30003992	(103271317)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	823139
1026	25.3	8.1	7.1	chr12	30800282	30800673	(102474636)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	824214
328	29.6	0.0	5.3	chr12	31729530	31729661	(101545648)	C	MIRb	SINE/MIR	(16)	252	128	825912
13	25.4	0.0	2.3	chr12	32106755	32106798	(101168511)	+	(CCCCCCG)n	Simple_repeat	1	44	(0)	826842
13	20.6	4.9	4.7	chr12	32106869	32106959	(101168350)	+	(GCGAGCC)n	Simple_repeat	1	91	(0)	826843
1447	20.5	9.3	3.8	chr12	32616818	32617182	(100658127)	C	MSTD	LTR/ERVL-MaLR	(9)	387	1	827787
11352	10.7	0.4	0.1	chr12	38436582	38438156	(94837153)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	831103
1660	18.9	9.1	1.4	chr12	38605614	38605978	(94669331)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	831321
661	25.3	16.4	1.6	chr12	38850556	38850860	(94424449)	+	L2c	LINE/L2	1939	2297	(1122)	831615
1153	20.4	14.2	5.4	chr12	38850867	38851197	(94424112)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	831616
1204	32.7	5.5	3.5	chr12	38851205	38852113	(94423196)	+	L2c	LINE/L2	2306	3234	(153)	831615
517	35.0	6.4	4.9	chr12	40240741	40241125	(93034184)	C	L2b	LINE/L2	(0)	3375	2985	833521
222	25.0	5.0	7.7	chr12	40241224	40241327	(93033982)	C	L2b	LINE/L2	(450)	2969	2869	833521
19	23.2	0.0	3.4	chr12	42237770	42237868	(91037441)	+	(CCCCGC)n	Simple_repeat	1	95	(0)	836251
18	31.3	0.0	2.7	chr12	42237908	42237981	(91037328)	+	(CGC)n	Simple_repeat	1	74	(0)	836252
13	18.9	0.0	0.0	chr12	42589114	42589143	(90686166)	+	(CCTCG)n	Simple_repeat	1	30	(0)	836900
2059	20.2	2.3	0.8	chr12	43173913	43174302	(90101007)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	837715
2244	13.0	1.3	9.1	chr12	43770753	43771182	(89504127)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	838524
1292	24.6	9.2	3.6	chr12	44917505	44917946	(88357363)	+	MLT1E1A	LTR/ERVL-MaLR	1	469	(211)	840076
1428	27.8	6.5	3.8	chr12	45686225	45686887	(87588422)	C	MST-int	LTR/ERVL-MaLR	(667)	984	303	841214
1981	14.6	3.3	0.3	chr12	45686886	45687085	(87588224)	C	MSTC	LTR/ERVL-MaLR	(89)	339	129	841215
2106	15.7	4.7	0.8	chr12	45687086	45687470	(87587839)	+	MER57B2	LTR/ERV1	1	401	(2)	841216
6773	19.7	7.7	0.4	chr12	47612430	47613874	(85661435)	+	MSTB1-int	LTR/ERVL-MaLR	2	1560	(91)	843957
1728	15.6	6.3	3.1	chr12	48165617	48165967	(85109342)	+	MLT1A0	LTR/ERVL-MaLR	1	363	(2)	844791
565	33.5	8.4	8.4	chr12	48165968	48166580	(85108729)	C	L2a	LINE/L2	(203)	3223	2559	844790
2317	10.9	0.0	0.0	chr12	48416580	48416872	(84858437)	+	AluSx1	SINE/Alu	1	293	(19)	845167
1011	21.0	10.3	7.4	chr12	48416873	48417150	(84858159)	+	MSTD	LTR/ERVL-MaLR	101	396	(0)	845166
13	19.4	8.8	2.7	chr12	49131483	49131550	(84143759)	+	(CCGAGCC)n	Simple_repeat	1	74	(0)	846446
1376	18.0	19.6	0.3	chr12	50590875	50591203	(82684106)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	849582
2178	13.0	2.6	5.2	chr12	50834907	50835294	(82440015)	+	THE1D	LTR/ERVL-MaLR	2	379	(2)	850099
20	24.6	6.0	1.1	chr12	56104552	56104639	(77170670)	+	(CTCG)n	Simple_repeat	1	92	(0)	858918
7971	7.1	0.4	1.3	chr12	56496570	56497585	(76777724)	+	LTR13	LTR/ERVK	1	1007	(0)	859647
7787	7.0	0.8	1.9	chr12	56500707	56501724	(76773585)	C	LTR13	LTR/ERVK	(0)	1007	1	859650
983	9.2	11.3	0.7	chr12	56684971	56685112	(76590197)	+	AluJb	SINE/Alu	133	291	(21)	860038
499	31.6	9.8	6.4	chr12	57448591	57448804	(75826505)	C	L2	LINE/L2	(1106)	2313	2080	861350
1908	18.7	9.3	2.5	chr12	57448805	57449172	(75826137)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	861352
3212	10.5	4.9	0.4	chr12	57640676	57641126	(75634183)	+	MER4A1	LTR/ERV1	1	472	(0)	861619
15	20.4	0.0	2.4	chr12	58920321	58920361	(74354948)	+	(CGCTCG)n	Simple_repeat	1	41	(0)	863390
2091	17.4	2.3	3.3	chr12	63023883	63024279	(70251030)	+	MSTD	LTR/ERVL-MaLR	4	396	(0)	868852
2141	11.3	0.0	0.3	chr12	64650398	64650714	(68624595)	C	AluSx3	SINE/Alu	(0)	311	1	871554
981	23.7	9.6	6.9	chr12	65576545	65576907	(67698402)	+	MLT1A	LTR/ERVL-MaLR	1	374	(0)	872995
372	25.8	5.9	5.2	chr12	65983502	65983636	(67291673)	+	L2b	LINE/L2	3240	3375	(0)	873619
13	13.7	7.1	2.2	chr12	66804201	66804242	(66471067)	+	(CAGCA)n	Simple_repeat	1	45	(0)	874926
21	32.9	0.8	4.1	chr12	67269580	67269701	(66005608)	+	(GCGGCG)n	Simple_repeat	1	123	(0)	875650
983	28.4	6.4	0.5	chr12	68040889	68041256	(65234053)	C	MLT1G1	LTR/ERVL-MaLR	(188)	391	1	876789
773	15.5	6.1	0.0	chr12	69880639	69880793	(63394516)	C	MER5A1	DNA/hAT-Charlie	(0)	166	2	880029
1165	21.3	9.8	7.0	chr12	72407922	72408305	(60867004)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	883805
5081	18.1	1.2	0.0	chr12	72453005	72453893	(60821416)	+	MSTA-int	LTR/ERVL-MaLR	5	904	(747)	883865
487	18.3	0.0	0.0	chr12	72453900	72453981	(60821328)	C	L1PBa	LINE/L1	(5782)	1081	1000	883866
12	13.9	0.0	0.0	chr12	76084480	76084503	(57190806)	+	(TCCC)n	Simple_repeat	1	24	(0)	888580
17	16.9	2.0	3.9	chr12	76084621	76084670	(57190639)	+	(GCGGCA)n	Simple_repeat	1	51	(0)	888581
1982	19.6	0.8	6.7	chr12	76148470	76148890	(57126419)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	888737
684	28.7	1.1	0.0	chr12	76203496	76203676	(57071633)	+	MLT1H1	LTR/ERVL-MaLR	1	183	(372)	888839
356	12.7	0.0	0.0	chr12	76917608	76917662	(56357647)	C	MSTD	LTR/ERVL-MaLR	(0)	396	342	890079
683	18.8	0.0	0.0	chr12	76917685	76917796	(56357513)	C	AluJr	SINE/Alu	(187)	125	14	890080
1378	20.9	4.8	4.5	chr12	76917803	76918158	(56357151)	C	MSTD	LTR/ERVL-MaLR	(39)	357	1	890079
7123	19.7	12.9	3.8	chr12	77767311	77768899	(55506410)	C	MER52A	LTR/ERV1	(0)	1755	1	891265
30	10.0	0.0	5.1	chr12	79691010	79691068	(53584241)	+	GA-rich	Low_complexity	1	59	(0)	893882
2310	15.6	5.9	2.7	chr12	81111300	81111741	(52163568)	C	LTR32	LTR/ERVL	(0)	457	1	895999
1513	22.9	8.1	1.9	chr12	81698185	81698553	(51576756)	+	MSTD	LTR/ERVL-MaLR	1	394	(2)	896747
1362	21.9	7.8	1.4	chr12	86309307	86309676	(46965633)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	902775
4178	22.9	3.2	2.6	chr12	87707453	87707566	(45567743)	+	L1MC3	LINE/L1	2511	2626	(3695)	904548
1215	22.4	14.4	2.0	chr12	87707567	87707912	(45567397)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	904553
2355	24.5	1.9	0.2	chr12	88376595	88377126	(44898183)	C	MSTD-int	LTR/ERVL-MaLR	(1193)	542	2	905433
1653	18.9	7.1	4.4	chr12	88377129	88377511	(44897798)	C	MSTD	LTR/ERVL-MaLR	(0)	396	3	905433
1496	22.5	4.8	2.6	chr12	89605258	89605644	(43669665)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	907311
1651	25.5	8.7	8.7	chr12	89605645	89606469	(43668840)	+	HAL1	LINE/L1	1678	2506	(1)	907309
15	21.8	0.0	0.0	chr12	89708841	89708877	(43566432)	+	(GGC)n	Simple_repeat	1	37	(0)	907474
27	23.0	1.4	1.4	chr12	89709271	89709343	(43565966)	+	(CGC)n	Simple_repeat	1	74	(0)	907475
1311	20.4	20.5	2.4	chr12	90771189	90771523	(42503786)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	909011
1828	19.3	0.8	6.6	chr12	92639595	92640005	(40635304)	+	MSTD	LTR/ERVL-MaLR	10	396	(0)	911886
15	27.7	0.0	4.5	chr12	93570274	93570339	(39704970)	+	G-rich	Low_complexity	1	66	(0)	913736
1409	26.8	9.4	12.0	chr12	93599460	93599575	(39675734)	C	L1ME3Cz	LINE/L1	(948)	49	5	913783
1852	19.9	6.1	1.9	chr12	93599576	93599954	(39675355)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	913787
1367	26.8	9.4	12.0	chr12	93599955	93600779	(39674530)	C	L1M5	LINE/L1	(925)	5221	4362	913788
2124	16.8	6.8	0.3	chr12	93609772	93610141	(39665168)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	913807
2155	17.2	2.5	3.0	chr12	94197220	94197437	(39077872)	+	MSTD	LTR/ERVL-MaLR	3	209	(187)	914844
34	3.0	0.0	0.0	chr12	94197438	94197471	(39077838)	+	(TC)n	Simple_repeat	1	34	(0)	914845
2155	17.2	2.5	3.0	chr12	94197472	94197648	(39077661)	+	MSTD	LTR/ERVL-MaLR	210	395	(1)	914844
1063	12.3	0.6	4.7	chr12	94197649	94197725	(39077584)	C	MLT1D	LTR/ERVL-MaLR	(426)	79	2	914843
1912	18.0	7.3	2.9	chr12	94203786	94204163	(39071146)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	914860
549	16.2	0.0	4.6	chr12	94336827	94336935	(38938374)	C	FLAM_C	SINE/Alu	(0)	133	29	915044
1337	18.5	13.9	3.7	chr12	94747761	94748114	(38527195)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	915760
1914	16.2	1.6	0.3	chr12	95584865	95585167	(37690142)	+	AluJb	SINE/Alu	2	308	(4)	917510
1192	18.7	9.7	2.6	chr12	98410300	98410669	(34864640)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	922158
1576	19.7	7.2	2.7	chr12	99628587	99628929	(33646380)	C	MSTD	LTR/ERVL-MaLR	(0)	396	33	924137
348	33.3	8.7	3.6	chr12	99922528	99922664	(33352645)	C	L2c	LINE/L2	(8)	3379	3234	924566
1853	17.1	10.9	0.6	chr12	99922665	99923017	(33352292)	+	MSTD	LTR/ERVL-MaLR	3	396	(0)	924567
348	38.2	4.0	1.6	chr12	99923018	99923143	(33352166)	C	L2c	LINE/L2	(154)	3233	3174	924566
5502	11.0	0.5	0.0	chr12	100164249	100164984	(33110325)	C	HERVK22-int	LTR/ERVK	(6096)	741	2	924999
6237	11.6	10.3	2.6	chr12	103960665	103961537	(29313772)	+	Tigger3b	DNA/TcMar-Tigger	1	955	(276)	931608
42	20.4	2.2	5.0	chr12	104138230	104138383	(29136926)	+	(GCCCC)n	Simple_repeat	1	149	(0)	931921
1846	19.0	3.9	0.3	chr12	104249049	104249397	(29025912)	C	MLT1A0	LTR/ERVL-MaLR	(2)	363	2	932174
7717	7.5	0.9	1.5	chr12	104293662	104294674	(28980635)	C	LTR13	LTR/ERVK	(0)	1007	1	932295
420	32.9	13.1	0.9	chr12	104475204	104475430	(28799879)	C	L2c	LINE/L2	(14)	3373	3115	932657
571	22.7	1.6	1.6	chr12	104475439	104475559	(28799750)	C	L2a	LINE/L2	(1)	3425	3305	932658
38	0.0	0.0	0.0	chr12	104475659	104475691	(28799618)	+	(TA)n	Simple_repeat	1	33	(0)	932659
606	27.7	9.3	6.8	chr12	104507624	104507991	(28767318)	C	MLT1H	LTR/ERVL-MaLR	(169)	380	3	932725
759	17.3	3.1	5.5	chr12	104785352	104785516	(28489793)	+	MER5A1	DNA/hAT-Charlie	1	161	(5)	933291
1624	18.2	4.7	0.3	chr12	104785638	104785945	(28489364)	C	MSTD	LTR/ERVL-MaLR	(74)	322	1	933292
1898	19.8	4.5	1.8	chr12	105646769	105647153	(27628156)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	934755
631	35.3	1.5	9.4	chr12	105647154	105647193	(27628116)	C	MLT1K	LTR/ERVL-MaLR	(544)	51	16	934752
290	23.1	2.8	10.3	chr12	107351437	107351461	(25923848)	+	MIRc	SINE/MIR	44	66	(202)	937936
1853	17.5	10.3	0.6	chr12	107351462	107351818	(25923491)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	937937
290	23.1	2.8	10.3	chr12	107351819	107351908	(25923401)	+	MIRc	SINE/MIR	67	150	(118)	937936
224	25.9	10.1	4.0	chr12	109995451	109995599	(23279710)	C	MIR	SINE/MIR	(69)	193	35	943773
246	32.9	1.9	7.3	chr12	111298748	111298962	(21976347)	C	L2b	LINE/L2	(89)	3286	3087	946742
2393	7.0	0.0	3.2	chr12	111843807	111844121	(21431188)	C	AluY	SINE/Alu	(6)	305	1	948012
2269	10.5	0.0	1.3	chr12	111844178	111844490	(21430819)	C	AluSc8	SINE/Alu	(2)	309	1	948013
14	25.4	3.0	4.4	chr12	112418853	112418936	(20856373)	+	(GGC)n	Simple_repeat	1	82	(0)	949170
2872	10.2	3.3	2.1	chr12	112633302	112633724	(20641585)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	949729
1030	25.1	10.7	3.0	chr12	115517873	115518234	(17757075)	+	MSTD	LTR/ERVL-MaLR	1	393	(3)	956192
2296	13.1	11.0	0.5	chr12	116402549	116402931	(16872378)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	957942
18	19.7	0.0	3.9	chr12	116455985	116456035	(16819274)	+	(TTCTTT)n	Simple_repeat	1	51	(0)	958098
366	16.9	21.7	7.1	chr12	116568437	116568548	(16706761)	C	MLT1G1	LTR/ERVL-MaLR	(46)	533	393	958399
1217	16.5	18.6	12.4	chr12	116568549	116568855	(16706454)	+	MSTC	LTR/ERVL-MaLR	5	360	(68)	958400
2333	8.5	1.6	1.0	chr12	116568856	116569161	(16706148)	C	AluY	SINE/Alu	(3)	308	1	958401
594	27.0	10.4	3.0	chr12	116728168	116728413	(16546896)	+	L2a	LINE/L2	3116	3423	(3)	958779
1964	17.2	2.8	1.8	chr12	118114670	118114833	(15160476)	C	L1MB7	LINE/L1	(8)	6176	6012	961883
1300	17.8	22.0	2.8	chr12	118114834	118115151	(15160158)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	961884
1964	17.2	2.8	1.8	chr12	118115152	118115376	(15159933)	C	L1MB7	LINE/L1	(173)	6011	5783	961883
35	5.0	0.0	0.0	chr12	119156612	119156652	(14118657)	+	(CCGGAG)n	Simple_repeat	1	41	(0)	964111
48	5.5	0.0	0.0	chr12	119156703	119156759	(14118550)	+	(AGCCGG)n	Simple_repeat	1	57	(0)	964112
2391	14.1	1.4	4.8	chr12	119358220	119358288	(13917021)	C	L1MA4A	LINE/L1	(389)	5914	5853	964599
1127	18.0	3.9	2.9	chr12	119358289	119358555	(13916754)	+	MSTD	LTR/ERVL-MaLR	85	396	(0)	964598
2122	7.6	2.7	1.0	chr12	120292321	120292608	(12982701)	+	AluSg4	SINE/Alu	1	293	(17)	966632
8457	5.6	0.5	0.1	chr12	120335312	120336314	(12938995)	+	LTR13	LTR/ERVK	1	1007	(0)	966776
2162	7.9	2.4	0.0	chr12	120584161	120584440	(12690869)	C	AluSx1	SINE/Alu	(24)	288	2	967438
370	36.4	2.9	4.9	chr12	121130191	121130476	(12144833)	C	L2	LINE/L2	(1230)	2189	1910	968639
27	10.1	3.6	1.7	chr12	121130505	121130520	(12144789)	+	GA-rich	Low_complexity	1	17	(0)	968640
2122	14.3	1.3	0.0	chr12	121130521	121130828	(12144481)	+	AluSz	SINE/Alu	1	312	(0)	968641
419	29.9	11.8	0.6	chr12	121156461	121156625	(12118684)	C	MIRb	SINE/MIR	(41)	227	42	968713
16	23.9	2.9	4.2	chr12	122078733	122078801	(11196508)	+	(CGCCG)n	Simple_repeat	1	71	(0)	971060
20	25.1	2.3	4.5	chr12	122078969	122079055	(11196254)	+	(CCGCG)n	Simple_repeat	1	89	(0)	971061
18	18.8	6.5	1.5	chr12	122500541	122500611	(10774698)	+	(CGCCCT)n	Simple_repeat	1	74	(0)	972003
14	12.5	0.0	0.0	chr12	122500719	122500744	(10774565)	+	(TCG)n	Simple_repeat	1	26	(0)	972004
1859	13.4	5.2	0.7	chr12	122501193	122501483	(10773826)	+	AluJr	SINE/Alu	1	305	(7)	972005
15	29.9	0.0	6.1	chr12	122896049	122896130	(10379179)	+	(CCG)n	Simple_repeat	1	82	(0)	972885
1066	22.6	6.1	11.8	chr12	124272737	124273108	(9002201)	+	MSTD	LTR/ERVL-MaLR	1	358	(38)	975808
2304	6.5	0.3	1.0	chr12	124273109	124273414	(9001895)	+	AluY	SINE/Alu	1	304	(7)	975809
12	13.7	2.7	5.3	chr12	124863531	124863567	(8411742)	+	(CCCGGCG)n	Simple_repeat	1	38	(0)	976995
12	14.1	10.0	4.5	chr12	124863641	124863700	(8411609)	+	(ACAGCGC)n	Simple_repeat	1	66	(0)	976996
1856	4.6	4.2	0.2	chr12	127165908	127166171	(6109138)	C	LSU-rRNA_Hsa	rRNA	(1)	5034	4720	981018
134	1.9	3.0	2.3	chr12	127166172	127166337	(6108972)	+	(CCGAGGCCGA)n	Simple_repeat	1	171	(0)	981019
1114	24.1	2.7	4.8	chr12	129155498	129155865	(4119444)	C	MSTD	LTR/ERVL-MaLR	(0)	457	89	984575
246	17.6	0.0	1.9	chr12	129155864	129155915	(4119394)	C	MSTD	LTR/ERVL-MaLR	(216)	180	130	984575
230	21.7	0.0	1.6	chr12	129155945	129156005	(4119304)	C	MSTB2	LTR/ERVL-MaLR	(221)	236	177	984576
226	15.8	0.0	0.0	chr12	129156021	129156058	(4119251)	C	MSTB2	LTR/ERVL-MaLR	(217)	179	142	984576
229	26.4	15.5	2.8	chr12	130516792	130516970	(2758339)	C	L2a	LINE/L2	(559)	2860	2655	986774
2522	14.3	1.9	4.4	chr12	130517007	130517437	(2757872)	+	MSTC	LTR/ERVL-MaLR	3	422	(6)	986775
183	33.2	11.1	2.0	chr12	130517446	130517642	(2757667)	C	L2a	LINE/L2	(813)	2606	2390	986774
1501	19.3	14.9	0.9	chr12	130770461	130770800	(2504509)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	987182
7639	6.1	2.0	0.0	chr12	132051267	132052253	(1223056)	C	LTR13	LTR/ERVK	(0)	1007	1	989020
506	27.5	6.3	1.3	chr12	132985913	132986063	(289246)	C	L1MB7	LINE/L1	(3665)	2550	2392	990290
1091	22.9	11.4	5.2	chr12	133005550	133005918	(269391)	+	MSTD	LTR/ERVL-MaLR	2	396	(0)	990338
16	23.9	0.0	8.6	chr12	133037457	133037537	(237772)	+	G-rich	Low_complexity	1	81	(0)	990398
264	22.2	0.0	0.0	chr12	133037947	133037991	(237318)	C	Alu	SINE/Alu	(88)	45	1	990399
1652	14.7	0.4	0.4	chr13	19624505	19624763	(94739565)	+	MER2	DNA/TcMar-Tigger	81	339	(6)	992722
2252	15.2	7.5	0.2	chr13	19624800	19625196	(94739132)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	992723
1298	22.4	9.8	4.3	chr13	19952846	19953218	(94411110)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	993480
250	27.2	11.5	1.1	chr13	19953219	19953265	(94411063)	C	MIR3	SINE/MIR	(171)	97	50	993479
943	18.1	7.3	3.1	chr13	20102214	20102435	(94261893)	C	MSTD	LTR/ERVL-MaLR	(0)	396	165	993739
2749	2.6	0.0	0.0	chr13	20723649	20723950	(93640378)	C	AluYf1	SINE/Alu	(9)	302	1	994756
8949	5.1	0.5	0.0	chr13	24554558	24555559	(89808769)	C	LTR13	LTR/ERVK	(0)	1007	1	1000447
2295	6.8	0.7	5.8	chr13	24988971	24989280	(89375048)	C	AluY	SINE/Alu	(13)	298	5	1001123
31	19.1	3.9	0.0	chr13	26254168	26254244	(88110084)	+	(TGAG)n	Simple_repeat	1	80	(0)	1002972
16	24.0	2.0	0.0	chr13	26254578	26254626	(88109702)	+	(CCCCGGC)n	Simple_repeat	1	50	(0)	1002973
21	20.9	4.9	8.1	chr13	27171732	27171873	(87192455)	+	(CGGCCCC)n	Simple_repeat	1	149	(0)	1004433
1244	18.5	22.2	0.0	chr13	27479120	27479427	(86884901)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1005021
2616	14.0	3.0	2.4	chr13	27480398	27480822	(86883506)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	1005023
15	30.5	0.0	0.0	chr13	28138601	28138652	(86225676)	+	(GGC)n	Simple_repeat	1	52	(0)	1006218
15	19.9	2.5	0.0	chr13	28138675	28138714	(86225614)	+	(CCTCCC)n	Simple_repeat	1	41	(0)	1006219
21	23.2	1.6	1.6	chr13	28138720	28138781	(86225547)	+	(GGC)n	Simple_repeat	1	63	(0)	1006220
14	18.4	2.7	0.0	chr13	28139237	28139273	(86225055)	+	(CCTCCTT)n	Simple_repeat	1	38	(0)	1006221
46	2.3	0.0	0.0	chr13	28139508	28139551	(86224777)	+	(GT)n	Simple_repeat	1	44	(0)	1006222
15	13.7	0.0	0.0	chr13	28139552	28139575	(86224753)	+	(GGGGA)n	Simple_repeat	4	27	(0)	1006223
2383	14.7	3.5	4.0	chr13	30001799	30002224	(84362104)	C	MSTC	LTR/ERVL-MaLR	(4)	424	1	1008951
1987	32.8	5.9	1.4	chr13	30257281	30258056	(84106272)	C	MamRTE1	LINE/RTE-BovB	(62)	3750	2938	1009360
2472	13.8	5.4	0.0	chr13	32199852	32200256	(82164072)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	1012431
1928	20.6	3.8	0.0	chr13	34069444	34069822	(80294506)	+	MSTD	LTR/ERVL-MaLR	1	394	(2)	1015265
1952	19.1	3.6	1.1	chr13	35012099	35012478	(79351850)	C	MSTD	LTR/ERVL-MaLR	(6)	390	1	1016642
2464	24.6	5.6	3.6	chr13	36522113	36522226	(77842102)	C	L1ME1	LINE/L1	(3)	6176	6049	1018650
1558	21.9	8.2	0.6	chr13	36522227	36522588	(77841740)	C	MSTD	LTR/ERVL-MaLR	(0)	396	5	1018651
1542	24.7	3.6	2.1	chr13	37982561	37982948	(76381380)	C	MSTD	LTR/ERVL-MaLR	(2)	394	1	1020689
316	27.7	6.6	6.2	chr13	37982991	37983139	(76381189)	+	L1MEc	LINE/L1	780	932	(5377)	1020688
18	7.6	0.0	0.0	chr13	38687431	38687458	(75676870)	+	(GCT)n	Simple_repeat	1	28	(0)	1021594
18	21.6	2.1	0.0	chr13	39603217	39603264	(74761064)	+	(CCTCC)n	Simple_repeat	1	49	(0)	1022860
326	32.8	5.5	5.5	chr13	39882160	39882469	(74481859)	C	LTR33	LTR/ERVL	(0)	515	206	1023272
282	24.8	3.8	0.0	chr13	39882501	39882601	(74481727)	C	LTR33	LTR/ERVL	(407)	108	4	1023272
272	22.9	3.5	1.2	chr13	41205955	41206038	(73158290)	+	L1MC4	LINE/L1	7492	7577	(465)	1025444
934	17.9	10.8	5.5	chr13	41206060	41206420	(73157908)	+	MSTC	LTR/ERVL-MaLR	1	425	(3)	1025445
16	31.1	0.0	0.0	chr13	42048809	42048863	(72315465)	+	(CGC)n	Simple_repeat	1	55	(0)	1026762
96	0.0	0.0	0.0	chr13	42049053	42049137	(72315191)	+	(GGGAAGGCG)n	Simple_repeat	1	85	(0)	1026763
31	19.2	0.0	4.8	chr13	42049152	42049235	(72315093)	+	(GGCGG)n	Simple_repeat	1	84	(0)	1026764
2014	16.0	5.6	6.5	chr13	42105070	42105469	(72258859)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1026853
342	14.1	9.6	1.2	chr13	43016066	43016151	(71348177)	C	MLT1L	LTR/ERVL-MaLR	(0)	610	517	1028261
807	26.3	10.7	3.1	chr13	43016163	43016219	(71348109)	+	L1MC5a	LINE/L1	2315	2367	(410)	1028262
1894	21.6	2.0	2.0	chr13	43016220	43016615	(71347713)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1028263
63	13.9	4.1	0.0	chr13	43879726	43879847	(70484481)	+	(CGAGG)n	Simple_repeat	1	127	(0)	1029464
16	21.6	0.0	0.0	chr13	44436971	44437002	(69927326)	+	(C)n	Simple_repeat	1	32	(0)	1030298
1683	20.1	7.1	4.7	chr13	44629413	44629757	(69734571)	+	MSTD	LTR/ERVL-MaLR	35	395	(1)	1030632
1910	20.6	1.5	3.5	chr13	45942858	45943259	(68421069)	+	MSTD	LTR/ERVL-MaLR	3	396	(0)	1033122
1575	23.1	6.6	0.0	chr13	47236192	47236559	(67127769)	C	MSTD	LTR/ERVL-MaLR	(0)	396	3	1035052
12	15.3	5.3	2.5	chr13	48975985	48976022	(65388306)	+	(GCGGAG)n	Simple_repeat	1	40	(0)	1037665
30	3.1	0.0	0.0	chr13	48976583	48976615	(65387713)	+	(CGGGGG)n	Simple_repeat	1	33	(0)	1037666
13	27.4	0.0	6.2	chr13	49792664	49792727	(64571601)	+	G-rich	Low_complexity	1	64	(0)	1039049
1416	20.5	14.9	2.0	chr13	49864468	49864811	(64499517)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1039213
44	0.0	0.0	0.0	chr13	52455636	52455675	(61908653)	+	(GCGGTG)n	Simple_repeat	1	40	(0)	1043143
807	27.5	11.9	3.9	chr13	53834578	53834940	(60529388)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1045174
1745	27.1	4.8	4.0	chr13	53834941	53835366	(60528962)	C	L1ME2	LINE/L1	(3412)	2907	2484	1045172
1753	21.4	2.5	2.0	chr13	53960306	53960411	(60403917)	+	MLT1A1	LTR/ERVL-MaLR	9	117	(291)	1045334
1209	21.3	11.1	3.3	chr13	53960412	53960775	(60403553)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1045335
1753	21.4	2.5	2.0	chr13	53960776	53961064	(60403264)	+	MLT1A1	LTR/ERVL-MaLR	118	406	(2)	1045334
11218	10.3	0.9	0.0	chr13	53965482	53967047	(60397281)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	1045342
2410	11.9	1.6	1.1	chr13	55023924	55024296	(59340032)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1046644
10120	11.0	0.4	0.1	chr13	56881722	56883125	(57481203)	+	THE1B-int	LTR/ERVL-MaLR	1	1408	(172)	1048886
466	30.7	6.8	4.8	chr13	60644628	60644815	(53719513)	+	MIRb	SINE/MIR	48	239	(29)	1053812
1732	17.3	3.3	7.3	chr13	60644822	60645046	(53719282)	C	MSTD	LTR/ERVL-MaLR	(2)	394	192	1053813
2080	12.6	3.5	0.0	chr13	60645047	60645347	(53718981)	C	AluSz	SINE/Alu	(0)	312	1	1053814
2553	7.2	0.0	0.0	chr13	61861150	61861456	(52502872)	+	AluYk4	SINE/Alu	2	308	(3)	1055290
1721	10.0	2.2	9.2	chr13	61862982	61863317	(52501011)	C	LTR14A	LTR/ERVK	(0)	344	54	1055292
590	8.8	13.6	1.9	chr13	61863302	61863405	(52500923)	C	LTR14A	LTR/ERVK	(489)	119	2	1055292
3074	14.0	0.8	8.3	chr13	61963734	61964302	(52400026)	C	MER1A	DNA/hAT-Charlie	(0)	529	4	1055417
258	24.2	3.2	16.7	chr13	61964303	61964335	(52399993)	+	L1MA8	LINE/L1	6230	6255	(36)	1055414
9733	12.1	4.0	3.9	chr13	62050855	62052427	(52311901)	+	THE1B-int	LTR/ERVL-MaLR	6	1580	(0)	1055535
2559	11.3	0.0	0.3	chr13	62052430	62052792	(52311536)	+	THE1B	LTR/ERVL-MaLR	3	364	(0)	1055535
2126	14.5	4.3	0.3	chr13	62324379	62324738	(52039590)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1055860
17	16.3	2.3	2.3	chr13	62324749	62324791	(52039537)	+	(TTTA)n	Simple_repeat	1	44	(0)	1055861
1884	23.6	6.9	5.3	chr13	62686784	62687328	(51677000)	+	MLT2B3	LTR/ERVL	1	554	(0)	1056310
1640	17.1	5.9	1.5	chr13	62687717	62688042	(51676286)	C	MER61A	LTR/ERV1	(0)	341	1	1056311
9346	16.1	3.5	0.8	chr13	63009431	63011011	(51353317)	C	MSTA-int	LTR/ERVL-MaLR	(6)	1625	1	1056706
3415	20.2	1.1	0.2	chr13	63396578	63397191	(50967137)	+	MER52A	LTR/ERV1	1136	1755	(0)	1057216
188	35.0	4.9	1.7	chr13	63403266	63403384	(50960944)	+	L2a	LINE/L2	2399	2521	(898)	1057225
833	25.7	14.3	4.5	chr13	63403417	63403730	(50960598)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	16	1057227
444	31.0	2.5	5.4	chr13	64409387	64409649	(49954679)	+	L1MEg	LINE/L1	1308	1498	(5835)	1058476
4945	11.9	3.6	1.1	chr13	65330371	65331186	(49033142)	C	LTR1A2	LTR/ERV1	(0)	837	1	1059669
37	33.5	3.1	3.4	chr13	65331187	65331252	(49033076)	+	(AT)n	Simple_repeat	2	69	(0)	1059670
10996	10.4	0.4	3.3	chr13	65387234	65388861	(48975467)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	1059742
238	15.7	1.9	8.9	chr13	65429686	65429741	(48934587)	C	HAL1	LINE/L1	(622)	1885	1834	1059811
227	22.2	1.8	1.8	chr13	65429830	65429884	(48934444)	C	MLT1-int	LTR/ERVL-MaLR	(515)	856	802	1059812
1261	24.1	7.8	1.4	chr13	65429941	65430302	(48934026)	+	MLT1A1	LTR/ERVL-MaLR	20	406	(2)	1059813
7250	19.8	8.9	2.4	chr13	65843211	65844848	(48519480)	+	MER52A	LTR/ERV1	1	1755	(0)	1060281
10895	12.9	0.5	3.5	chr13	66233466	66235146	(48129182)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	1060782
4504	15.3	6.6	0.7	chr13	66260118	66260888	(48103440)	C	LTR1B	LTR/ERV1	(0)	824	5	1060807
1719	17.1	9.5	5.6	chr13	66387365	66387778	(47976550)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	1060968
7324	13.3	2.5	0.4	chr13	66684990	66686106	(47678222)	+	THE1C-int	LTR/ERVL-MaLR	491	1631	(0)	1061331
1561	18.8	2.8	9.8	chr13	66736175	66736593	(47627735)	+	MLT1B	LTR/ERVL-MaLR	2	390	(0)	1061394
2143	9.8	4.0	0.0	chr13	67240852	67241137	(47123191)	+	AluSq2	SINE/Alu	1	298	(15)	1062015
3614	17.5	17.8	5.7	chr13	67415684	67416618	(46947710)	+	LTR27E	LTR/ERV1	1	1073	(4)	1062246
490	28.1	11.6	4.8	chr13	67416619	67416874	(46947454)	+	L1MEi	LINE/L1	1108	1390	(822)	1062245
2065	24.4	15.6	4.2	chr13	67567714	67567991	(46796337)	C	L1MC3	LINE/L1	(756)	7029	6708	1062426
16	24.8	4.3	2.7	chr13	67568019	67568088	(46796240)	+	(AAT)n	Simple_repeat	1	73	(0)	1062428
12	13.7	2.8	5.4	chr13	68027336	68027371	(46336957)	+	(ATTAT)n	Simple_repeat	1	37	(0)	1063005
1996	18.8	3.8	0.0	chr13	70574548	70574924	(43789404)	C	MSTD	LTR/ERVL-MaLR	(0)	396	5	1066314
1458	25.8	7.5	4.8	chr13	70574925	70574983	(43789345)	C	L1MEf	LINE/L1	(4679)	1563	1500	1066312
1494	33.1	9.1	4.7	chr13	70901292	70902430	(43461898)	+	MLT1J1-int	LTR/ERVL-MaLR	85	1292	(95)	1066762
1939	15.4	6.3	7.5	chr13	70902431	70902831	(43461497)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1066764
1494	33.1	9.1	4.7	chr13	70902832	70902922	(43461406)	+	MLT1J1-int	LTR/ERVL-MaLR	1293	1374	(13)	1066762
816	31.4	4.0	2.6	chr13	70902938	70903359	(43460969)	+	MLT1J1	LTR/ERVL-MaLR	3	430	(14)	1066762
4888	23.6	7.8	4.3	chr13	71341047	71342502	(43021826)	+	L1M4	LINE/L1	202	1693	(5824)	1067326
1017	23.3	13.4	3.9	chr13	71362889	71363245	(43001083)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1067357
5937	24.2	5.8	5.8	chr13	71363246	71363626	(43000702)	C	MSTD-int	LTR/ERVL-MaLR	(0)	1735	1338	1067357
312	34.3	13.2	8.1	chr13	71393649	71393802	(42970526)	C	HAL1	LINE/L1	(1858)	649	474	1067385
2196	9.4	0.3	1.1	chr13	71393803	71394089	(42970239)	+	AluSx3	SINE/Alu	1	285	(26)	1067392
32	2.5	2.3	2.3	chr13	71394090	71394132	(42970196)	+	(AAAT)n	Simple_repeat	1	44	(0)	1067393
312	34.3	13.2	8.1	chr13	71394133	71394198	(42970130)	C	HAL1	LINE/L1	(2034)	473	416	1067385
576	27.2	8.2	5.1	chr13	72449100	72449199	(41915129)	C	LTR81B	LTR/Gypsy	(52)	1341	1230	1068802
865	26.3	11.2	4.4	chr13	72449200	72449565	(41914763)	C	MSTD	LTR/ERVL-MaLR	(2)	394	1	1068803
276	37.0	4.8	0.0	chr13	72781432	72781550	(41582778)	+	MIRc	SINE/MIR	13	137	(131)	1069318
2582	9.8	1.6	0.8	chr13	72946062	72946433	(41417895)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1069604
9523	12.2	2.3	2.6	chr13	72946434	72947638	(41416690)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	376	1069604
2666	7.3	0.0	0.0	chr13	73051696	73051996	(41312332)	C	AluY	SINE/Alu	(9)	302	2	1069850
1986	16.0	0.0	2.1	chr13	73052220	73052507	(41311821)	C	AluJr4	SINE/Alu	(20)	292	11	1069851
704	29.7	7.5	0.9	chr13	73390236	73390459	(40973869)	+	MLT1H1	LTR/ERVL-MaLR	62	301	(254)	1070474
1050	22.3	2.3	2.7	chr13	73390546	73390808	(40973520)	+	MSTD	LTR/ERVL-MaLR	135	396	(0)	1070475
391	19.1	17.3	0.0	chr13	73390858	73390962	(40973366)	+	MLT1H1	LTR/ERVL-MaLR	421	547	(8)	1070474
2349	19.2	2.4	1.3	chr13	73554378	73554562	(40809766)	+	L1MC4a	LINE/L1	7347	7536	(346)	1070738
2298	13.5	6.3	1.3	chr13	73554563	73554938	(40809390)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1070739
25	26.0	0.0	2.9	chr13	74133820	74133889	(40230439)	+	(CA)n	Simple_repeat	1	70	(0)	1071555
19	12.4	0.0	0.0	chr13	74134159	74134193	(40230135)	+	(TGGGG)n	Simple_repeat	1	35	(0)	1071556
17	13.3	0.0	0.0	chr13	74134277	74134309	(40230019)	+	(GGGGCG)n	Simple_repeat	1	33	(0)	1071557
25	26.4	3.1	2.0	chr13	74134473	74134570	(40229758)	+	(CCCGC)n	Simple_repeat	1	101	(0)	1071558
1928	17.4	0.0	1.0	chr13	75078546	75078839	(39285489)	+	AluSx	SINE/Alu	1	291	(21)	1072812
1576	22.3	9.1	0.6	chr13	75078948	75079299	(39285029)	+	MSTD	LTR/ERVL-MaLR	1	385	(11)	1072813
789	26.5	4.9	1.3	chr13	75079304	75079540	(39284788)	+	L1M4	LINE/L1	332	577	(6940)	1072814
10774	3.2	0.2	0.3	chr13	75079544	75081624	(39282704)	+	L1PA3	LINE/L1	4075	6152	(3)	1072815
35	5.4	0.0	0.0	chr13	75480868	75480906	(38883422)	+	(CA)n	Simple_repeat	1	39	(0)	1073408
19	13.9	3.9	3.8	chr13	75482400	75482450	(38881878)	+	(TCCT)n	Simple_repeat	1	53	(0)	1073409
2072	19.9	1.3	0.5	chr13	76061324	76061712	(38302616)	+	MSTD	LTR/ERVL-MaLR	5	396	(0)	1074256
15	13.9	0.0	0.0	chr13	77326375	77326398	(37037930)	+	(AC)n	Simple_repeat	1	24	(0)	1076031
26	0.0	0.0	0.0	chr13	77326779	77326803	(37037525)	+	(CGC)n	Simple_repeat	1	25	(0)	1076032
20	13.0	0.0	0.0	chr13	77326918	77326952	(37037376)	+	(CCT)n	Simple_repeat	1	35	(0)	1076033
19	24.8	0.0	0.0	chr13	77327025	77327070	(37037258)	+	(GCC)n	Simple_repeat	1	46	(0)	1076034
2041	15.7	8.2	0.0	chr13	77448737	77449130	(36915198)	+	MSTB1	LTR/ERVL-MaLR	1	429	(3)	1076219
403	31.4	5.1	8.3	chr13	77449131	77449235	(36915093)	+	L2b	LINE/L2	3141	3228	(159)	1076218
589	34.2	9.6	1.6	chr13	77657214	77657274	(36707054)	C	MLT1J-int	LTR/ERVL-MaLR	(1054)	333	266	1076523
2005	19.6	0.6	0.3	chr13	77657275	77657637	(36706691)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	2	1076528
18	10.5	0.0	0.0	chr13	79481622	79481652	(34882676)	+	(TTTGT)n	Simple_repeat	1	31	(0)	1079007
1679	19.1	7.6	1.9	chr13	79498461	79498833	(34865495)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1079048
6270	14.5	6.3	2.3	chr13	79498834	79500000	(34864328)	+	L1MC	LINE/L1	3553	4772	(1374)	1079047
1220	23.0	10.9	3.8	chr13	80975628	80975993	(33388335)	C	MSTD	LTR/ERVL-MaLR	(0)	396	2	1080962
1196	19.4	11.8	4.8	chr13	81578528	81578905	(32785423)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	1081731
800	24.0	10.3	6.6	chr13	82084001	82084148	(32280180)	C	MSTD	LTR/ERVL-MaLR	(17)	348	176	1082321
47	0.0	0.0	0.0	chr13	82084149	82084188	(32280140)	+	(GT)n	Simple_repeat	1	40	(0)	1082322
876	15.8	3.4	1.8	chr13	82084189	82084373	(32279955)	C	MSTD	LTR/ERVL-MaLR	(190)	175	1	1082321
2656	28.5	4.5	6.4	chr13	83024905	83027154	(31337174)	+	L1MA8	LINE/L1	466	3517	(4048)	1083498
5542	11.7	16.8	5.3	chr13	85362955	85364056	(29000272)	+	LTR12D	LTR/ERV1	1	1254	(0)	1086446
1692	29.4	9.3	0.7	chr13	85650790	85651327	(28713001)	+	MLT2F	LTR/ERVL	1	589	(74)	1086815
1074	21.4	18.6	4.6	chr13	85706601	85706948	(28657380)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	1086895
3219	14.9	2.2	0.2	chr13	85923892	85924436	(28439892)	C	LTR38	LTR/ERV1	(0)	556	1	1087151
777	21.4	23.5	8.8	chr13	86510707	86511203	(27853125)	C	LTR49	LTR/ERV1	(0)	595	4	1087831
2823	21.2	8.6	7.0	chr13	86974343	86975198	(27389130)	+	MER52A	LTR/ERV1	217	1355	(768)	1088397
4144	21.6	2.5	1.9	chr13	88643629	88644518	(25719810)	+	MER52-int	LTR/ERV1	1	887	(6204)	1090574
1452	21.5	2.1	0.7	chr13	88644532	88644817	(25719511)	+	MER52-int	LTR/ERV1	1003	1292	(5799)	1090575
7322	10.2	0.7	2.0	chr13	88644836	88645907	(25718421)	C	MER11C	LTR/ERVK	(14)	1057	1	1090576
2611	11.7	0.0	0.3	chr13	89104236	89104611	(25259717)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1091163
14	27.5	1.7	3.3	chr13	91348957	91349016	(23015312)	+	(CGC)n	Simple_repeat	1	61	(0)	1094137
20	23.2	5.2	1.2	chr13	91398518	91398594	(22965734)	+	G-rich	Low_complexity	1	81	(0)	1094194
35	24.4	0.0	0.0	chr13	91398651	91398731	(22965597)	+	(GGC)n	Simple_repeat	1	81	(0)	1094195
2209	12.9	0.7	0.0	chr13	91422354	91422655	(22941673)	+	AluSx1	SINE/Alu	1	304	(8)	1094232
2011	16.3	5.7	1.2	chr13	91422656	91422992	(22941336)	C	MSTC	LTR/ERVL-MaLR	(71)	357	1	1094231
4928	11.1	4.0	1.1	chr13	91795978	91796734	(22567594)	C	LTR17	LTR/ERV1	(0)	780	1	1094765
1197	8.1	4.8	0.0	chr13	95273644	95273803	(19090525)	+	THE1B	LTR/ERVL-MaLR	1	168	(196)	1099681
957	5.0	0.0	1.7	chr13	95273804	95273922	(19090406)	C	AluYe5	SINE/Alu	(0)	310	194	1099682
1066	19.0	4.7	1.4	chr13	96526798	96527085	(17837243)	+	MER33	DNA/hAT-Charlie	2	299	(25)	1101744
880	21.9	0.6	0.0	chr13	96527086	96527254	(17837074)	C	AluJr	SINE/Alu	(7)	305	136	1101745
1836	17.2	3.0	9.7	chr13	98107510	98107649	(16256679)	+	MLT2C1	LTR/ERVL	1	148	(249)	1104091
1753	16.1	12.4	0.9	chr13	98107650	98107999	(16256329)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1104092
1836	17.2	3.0	9.7	chr13	98108000	98108282	(16256046)	+	MLT2C1	LTR/ERVL	149	395	(2)	1104091
1795	19.6	4.8	4.1	chr13	98502440	98502832	(15861496)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1104735
283	28.1	1.2	0.0	chr13	100451383	100451464	(13912864)	C	L1ME3G	LINE/L1	(297)	627	545	1107995
286	23.9	14.2	0.0	chr13	100451542	100451650	(13912678)	+	L2a	LINE/L2	2400	2526	(893)	1107996
266	14.7	8.0	0.0	chr13	100451669	100452272	(13912056)	+	(CT)n	Simple_repeat	1	652	(0)	1107997
1487	16.0	0.0	0.9	chr13	100505588	100505818	(13858510)	+	AluJb	SINE/Alu	6	234	(78)	1108090
181	34.8	9.8	1.4	chr13	100505944	100506083	(13858245)	C	MIRb	SINE/MIR	(21)	247	95	1108091
17	13.2	0.0	0.0	chr13	100506372	100506404	(13857924)	+	(CGGGGG)n	Simple_repeat	1	33	(0)	1108092
16	10.7	0.0	3.1	chr13	102596926	102596957	(11767371)	+	(CCGCCC)n	Simple_repeat	1	32	(0)	1111016
998	14.2	22.9	1.4	chr13	104166996	104167217	(10197111)	C	MSTD	LTR/ERVL-MaLR	(0)	408	125	1113118
2224	11.8	0.7	0.0	chr13	105945383	105945686	(8418642)	C	AluSz	SINE/Alu	(6)	306	1	1115403
796	23.1	1.1	1.1	chr13	105945838	105946012	(8418316)	C	MSTD	LTR/ERVL-MaLR	(3)	393	219	1115404
366	32.9	12.0	1.3	chr13	105946066	105946296	(8418032)	+	MIRc	SINE/MIR	2	260	(8)	1115405
1711	20.4	3.3	1.8	chr13	106354292	106354681	(8009647)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1115967
1125	19.3	22.6	0.3	chr13	108442390	108442706	(5921622)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	1118788
1109	22.7	17.0	2.1	chr13	108442708	108443192	(5921136)	+	MLT1F1	LTR/ERVL-MaLR	1	569	(0)	1118789
2187	15.3	5.8	0.3	chr13	110992955	110993328	(3371000)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1122021
1095	21.5	6.0	1.5	chr13	114193332	114193685	(170643)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	1125326
2302	8.2	1.6	0.0	chr14	20471020	20471197	(86572521)	C	AluY	SINE/Alu	(1)	310	133	1128101
26	0.0	0.0	0.0	chr14	20471198	20471222	(86572496)	+	(T)n	Simple_repeat	1	25	(0)	1128102
11972	9.3	0.2	1.2	chr14	20664741	20665912	(86377806)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	426	1128423
1614	17.9	10.1	4.0	chr14	20792525	20792839	(86250879)	+	MSTD	LTR/ERVL-MaLR	19	362	(34)	1128611
2278	7.9	0.7	0.0	chr14	20792840	20793164	(86250554)	C	AluSp	SINE/Alu	(0)	313	1	1128612
1658	20.0	6.5	4.3	chr14	22286190	22286653	(84757065)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	31	1130979
1915	17.0	1.7	0.6	chr14	22286656	22286999	(84756719)	+	MLT1A0	LTR/ERVL-MaLR	3	350	(15)	1130980
12	16.1	0.0	7.5	chr14	22312722	22312761	(84730957)	+	A-rich	Low_complexity	1	40	(0)	1131013
2221	15.6	3.0	2.0	chr14	22312766	22313157	(84730561)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1131014
13	23.2	7.5	1.4	chr14	23301599	23301665	(83742053)	+	(GGAAGGC)n	Simple_repeat	1	72	(0)	1132659
1893	18.9	5.3	2.1	chr14	27067858	27068240	(79975478)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1137625
1346	32.1	6.9	3.5	chr14	29733818	29734028	(77309690)	C	L1MEc	LINE/L1	(5316)	1084	852	1140910
2354	7.5	0.4	0.0	chr14	29734029	29734339	(77309379)	C	AluSg4	SINE/Alu	(0)	310	1	1140913
13	21.7	0.0	7.3	chr14	32076958	32077012	(74966706)	+	(CGCGC)n	Simple_repeat	1	55	(0)	1144637
13	7.9	7.4	0.0	chr14	32076988	32077014	(74966704)	+	(CGC)n	Simple_repeat	1	29	(0)	1144638
17	22.0	0.0	5.2	chr14	32077144	32077212	(74966506)	+	G-rich	Low_complexity	1	65	(0)	1144639
13	21.4	2.1	4.2	chr14	32077304	32077356	(74966362)	+	GA-rich	Low_complexity	1	51	(0)	1144640
15	17.7	0.0	0.0	chr14	32077370	32077401	(74966317)	+	(CGC)n	Simple_repeat	1	32	(0)	1144641
750	23.0	15.2	5.8	chr14	34869688	34870159	(72173559)	+	MLT1H	LTR/ERVL-MaLR	1	557	(22)	1148813
931	29.4	5.7	5.7	chr14	35068360	35068709	(71975009)	+	LTR33	LTR/ERVL	13	362	(153)	1149291
1822	18.0	8.9	1.1	chr14	35068704	35069063	(71974655)	C	MSTD	LTR/ERVL-MaLR	(5)	391	1	1149292
259	32.0	7.6	1.0	chr14	35069064	35069160	(71974558)	+	LTR33	LTR/ERVL	347	450	(65)	1149291
927	24.4	4.8	2.4	chr14	37221137	37221433	(69822285)	C	MSTD	LTR/ERVL-MaLR	(0)	396	59	1152685
2156	16.6	11.4	0.8	chr14	37221434	37221815	(69821903)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1152686
1125	21.5	14.4	7.1	chr14	37291608	37291914	(69751804)	C	MSTD	LTR/ERVL-MaLR	(0)	396	55	1152802
2165	10.5	0.0	2.1	chr14	37291915	37292229	(69751489)	C	AluY	SINE/Alu	(0)	311	2	1152803
2504	12.2	1.6	0.3	chr14	38628311	38628680	(68415038)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	1154471
9655	12.9	3.0	5.0	chr14	38628681	38630292	(68413426)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	1154471
2270	13.9	3.0	8.9	chr14	44953366	44953791	(62089927)	+	MSTC	LTR/ERVL-MaLR	29	428	(0)	1162397
32	31.1	0.0	3.7	chr14	49767978	49768120	(57275598)	+	(GGC)n	Simple_repeat	1	137	(0)	1168592
442	19.7	11.6	1.9	chr14	50196792	50196873	(56846845)	+	L1MC4	LINE/L1	6895	6995	(1047)	1169487
1776	14.3	5.4	0.4	chr14	50196874	50197152	(56846566)	C	AluJb	SINE/Alu	(18)	294	1	1169488
442	19.7	11.6	1.9	chr14	50197153	50197224	(56846494)	+	L1MC4	LINE/L1	6996	7065	(977)	1169487
1324	19.9	2.6	4.7	chr14	50197230	50197588	(56846130)	+	L1MC4	LINE/L1	7242	7592	(450)	1169487
33	19.3	2.3	2.3	chr14	50668015	50668100	(56375618)	+	(CCG)n	Simple_repeat	1	88	(0)	1170319
13	16.3	6.5	6.1	chr14	50668403	50668464	(56375254)	+	G-rich	Low_complexity	1	66	(0)	1170320
1197	21.5	10.4	1.8	chr14	52749012	52749352	(54294366)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	1173443
15	13.4	2.9	2.8	chr14	55051679	55051713	(51992005)	+	(GCT)n	Simple_repeat	1	36	(0)	1176946
8124	12.8	2.4	0.5	chr14	55312226	55313513	(51730205)	C	THE1D-int	LTR/ERVL-MaLR	(315)	1316	3	1177470
316	29.6	7.7	1.7	chr14	56515051	56515222	(50528496)	+	Tigger13a	DNA/TcMar-Tigger	17	199	(572)	1179308
2614	10.3	0.3	4.2	chr14	56515217	56515600	(50528118)	+	THE1C	LTR/ERVL-MaLR	7	375	(0)	1179309
13	24.4	0.0	4.3	chr14	57391075	57391121	(49652597)	+	GA-rich	Low_complexity	1	47	(0)	1180688
13	16.4	0.0	10.0	chr14	57391105	57391154	(49652564)	+	(GGC)n	Simple_repeat	1	50	(0)	1180689
13	13.2	0.0	0.0	chr14	57391183	57391207	(49652511)	+	(CAG)n	Simple_repeat	1	25	(0)	1180690
17	14.2	0.0	0.0	chr14	57391477	57391507	(49652211)	+	(GAG)n	Simple_repeat	1	31	(0)	1180691
531	27.6	5.7	8.4	chr14	58103148	58103295	(48940423)	+	MLT1D	LTR/ERVL-MaLR	203	341	(164)	1181629
251	12.8	4.1	0.0	chr14	58103296	58103342	(48940376)	+	MSTD	LTR/ERVL-MaLR	1	49	(347)	1181632
642	20.4	4.6	1.8	chr14	58103344	58103506	(48940212)	+	MSTD	LTR/ERVL-MaLR	129	346	(50)	1181632
1326	23.4	9.7	1.1	chr14	60265603	60265960	(46777758)	C	MSTD	LTR/ERVL-MaLR	(4)	392	1	1184810
189	36.2	4.0	9.9	chr14	61839040	61839118	(45204600)	C	L2c	LINE/L2	(131)	3256	3183	1187159
1564	17.6	15.4	0.6	chr14	61839119	61839455	(45204263)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1187160
534	21.3	4.0	1.7	chr14	63368828	63368999	(43674719)	+	L1MEb	LINE/L1	3866	4041	(2105)	1189105
1062	17.8	3.4	17.1	chr14	63369042	63369387	(43674331)	C	MSTD	LTR/ERVL-MaLR	(0)	396	100	1189108
21	20.1	3.0	2.9	chr14	64465366	64465431	(42578287)	+	(CCCCG)n	Simple_repeat	1	68	(0)	1191351
2708	11.1	6.8	2.0	chr14	67394684	67395089	(39648629)	+	MSTC	LTR/ERVL-MaLR	1	427	(1)	1195962
2009	18.1	3.8	2.6	chr14	68425292	68425682	(38618036)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1197685
1196	20.3	6.3	0.0	chr14	68425685	68425935	(38617783)	+	MSTD-int	LTR/ERVL-MaLR	2	269	(1466)	1197685
52	0.0	0.0	0.0	chr14	68700540	68700586	(38343132)	+	(AAAT)n	Simple_repeat	1	47	(0)	1198101
1743	19.9	2.2	4.6	chr14	68700587	68700875	(38342843)	+	MLT1A0	LTR/ERVL-MaLR	76	363	(2)	1198099
1473	17.4	9.6	4.7	chr14	69530599	69530894	(37512824)	C	MSTD	LTR/ERVL-MaLR	(1)	395	82	1199697
1928	10.3	0.0	0.0	chr14	69530895	69531136	(37512582)	+	AluSq2	SINE/Alu	56	297	(16)	1199698
187	22.2	0.0	0.0	chr14	70909794	70909829	(36133889)	+	L2a	LINE/L2	2501	2536	(883)	1201963
296	25.3	11.0	9.1	chr14	70909994	70910025	(36133693)	+	L2a	LINE/L2	2623	2654	(765)	1201963
191	4.1	0.0	0.5	chr14	70910026	70910230	(36133488)	+	(CTC)n	Simple_repeat	1	205	(0)	1201964
2506	7.2	0.0	0.0	chr14	71628946	71629236	(35414482)	C	AluY	SINE/Alu	(20)	291	1	1203117
301	26.3	7.5	16.1	chr14	71804654	71805093	(35238625)	C	CR1_Mam	LINE/CR1	(1595)	609	211	1203358
1786	12.9	4.6	5.2	chr14	71805140	71805467	(35238251)	+	MSTC	LTR/ERVL-MaLR	8	333	(95)	1203359
2419	9.1	0.0	2.2	chr14	71805474	71805792	(35237926)	C	AluSx	SINE/Alu	(0)	312	1	1203360
2777	20.7	3.7	1.3	chr14	72146699	72147309	(34896409)	C	MSTD-int	LTR/ERVL-MaLR	(1108)	627	2	1203860
1735	13.8	19.4	1.5	chr14	72147312	72147635	(34896083)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1203860
2280	11.7	0.0	0.3	chr14	73319850	73320131	(33723587)	+	AluSx3	SINE/Alu	1	281	(30)	1205953
1955	13.6	1.7	0.0	chr14	73852826	73853120	(33190598)	C	AluSz6	SINE/Alu	(12)	300	1	1207232
2287	9.0	0.3	0.0	chr14	74748873	74749161	(32294557)	+	AluSp	SINE/Alu	2	291	(22)	1209095
833	21.1	16.1	8.9	chr14	74749164	74749375	(32294343)	C	MLT1A0	LTR/ERVL-MaLR	(60)	305	81	1209096
2106	13.8	0.0	0.7	chr14	74749376	74749679	(32294039)	+	AluSq	SINE/Alu	1	302	(11)	1209097
190	29.7	5.9	0.0	chr14	75307737	75307800	(31735918)	+	MIRc	SINE/MIR	112	179	(89)	1210172
2476	15.7	0.5	1.0	chr14	75347031	75347428	(31696290)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1210267
566	18.9	0.0	0.0	chr14	75406334	75406428	(31637290)	+	MER5A1	DNA/hAT-Charlie	37	131	(35)	1210394
2466	12.8	4.9	6.9	chr14	75406434	75406666	(31637052)	C	MSTC	LTR/ERVL-MaLR	(0)	428	201	1210395
712	20.0	0.8	0.0	chr14	75406667	75406786	(31636932)	C	FLAM_A	SINE/Alu	(20)	122	2	1210396
2466	12.8	4.9	6.9	chr14	75406787	75406988	(31636730)	C	MSTC	LTR/ERVL-MaLR	(228)	200	2	1210395
1952	17.2	9.1	0.0	chr14	75460833	75461192	(31582526)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1210501
3220	21.8	2.5	1.5	chr14	75593729	75594455	(31449263)	C	MSTD-int	LTR/ERVL-MaLR	(1000)	735	2	1210756
1705	21.1	8.4	0.0	chr14	75594458	75594721	(31448997)	C	MSTD	LTR/ERVL-MaLR	(0)	396	101	1210756
1868	15.9	1.0	0.7	chr14	75594722	75595017	(31448701)	C	AluJo	SINE/Alu	(15)	297	1	1210757
1340	10.4	4.2	10.2	chr14	75943998	75944253	(31099465)	+	MER50	LTR/ERV1	495	734	(0)	1211349
2316	8.7	1.6	0.3	chr14	75944289	75944599	(31099119)	+	MER50-int	LTR/ERV1	6883	7197	(8)	1211350
24	13.6	3.3	3.2	chr14	75982659	75982718	(31061000)	+	G-rich	Low_complexity	1	62	(0)	1211418
188	21.7	0.0	0.0	chr14	76001469	76001514	(31042204)	C	L2	LINE/L2	(643)	2776	2731	1211464
196	34.6	2.7	1.8	chr14	76001536	76001644	(31042074)	C	L2	LINE/L2	(2088)	1331	1222	1211463
1797	17.7	6.1	5.8	chr14	76001652	76001965	(31041753)	C	MSTD	LTR/ERVL-MaLR	(0)	396	76	1211466
1202	18.1	18.9	2.1	chr14	76129868	76130205	(30913513)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	1211667
18	11.9	0.0	5.0	chr14	77141539	77141578	(29902140)	+	(GCC)n	Simple_repeat	1	40	(0)	1213680
283	31.3	11.2	11.2	chr14	80136212	80136460	(26907258)	C	L2c	LINE/L2	(0)	3387	3108	1218798
2320	15.6	1.4	0.0	chr14	80136461	80136812	(26906906)	+	LTR18A	LTR/ERVL	1	357	(0)	1218799
283	31.3	11.2	11.2	chr14	80136813	80136918	(26906800)	C	L2c	LINE/L2	(280)	3107	3032	1218798
29	0.0	0.0	3.1	chr14	81436222	81436253	(25607465)	+	(CCCGCC)n	Simple_repeat	1	32	(0)	1220623
666	16.0	1.0	0.0	chr14	82115789	82115888	(24927830)	+	FLAM_A	SINE/Alu	25	125	(17)	1221675
1063	20.8	7.5	2.2	chr14	82115890	82116159	(24927559)	+	MSTC	LTR/ERVL-MaLR	102	428	(0)	1221674
2363	13.7	5.8	2.4	chr14	82841373	82841689	(24202029)	+	MSTC	LTR/ERVL-MaLR	1	336	(92)	1222662
37	2.2	4.3	0.0	chr14	82841690	82841735	(24201983)	+	(TCAAACTTC)n	Simple_repeat	1	48	(0)	1222663
2363	13.7	5.8	2.4	chr14	82841736	82841830	(24201888)	+	MSTC	LTR/ERVL-MaLR	337	428	(0)	1222662
1815	22.3	3.1	1.6	chr14	84226352	84226733	(22816985)	C	MSTD	LTR/ERVL-MaLR	(4)	392	5	1224529
225	27.9	10.3	0.0	chr14	88492845	88492948	(18550770)	C	L2b	LINE/L2	(20)	3355	3240	1230499
1613	20.2	9.6	0.6	chr14	89087712	89088069	(17955649)	+	MSTD	LTR/ERVL-MaLR	1	394	(2)	1231512
1610	21.0	5.7	2.1	chr14	89393919	89394209	(17649509)	C	MSTD	LTR/ERVL-MaLR	(43)	353	49	1231994
2205	9.1	4.5	1.0	chr14	89394210	89394506	(17649212)	C	AluSq2	SINE/Alu	(5)	308	1	1231995
1406	18.0	16.8	4.0	chr14	89861581	89861951	(17181767)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	1232859
837	23.3	13.7	4.8	chr14	92282503	92282813	(14760905)	+	MSTD	LTR/ERVL-MaLR	54	396	(0)	1237269
842	10.8	0.0	1.7	chr14	93206568	93206687	(13837031)	C	AluJr	SINE/Alu	(194)	118	1	1239083
13	24.3	0.0	4.3	chr14	93906494	93906540	(13137178)	+	(CTCCC)n	Simple_repeat	1	47	(0)	1240256
1588	16.7	15.4	1.8	chr14	94835352	94835692	(12208026)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1241930
212	31.1	14.8	0.8	chr14	95307260	95307392	(11736326)	C	L2b	LINE/L2	(0)	3375	3221	1242763
1994	16.2	8.1	0.8	chr14	95390672	95391038	(11652680)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1242923
907	29.4	11.1	2.4	chr14	96170856	96171496	(10872222)	+	L2a	LINE/L2	2676	3401	(25)	1244373
2033	17.6	1.9	2.2	chr14	96171702	96172067	(10871651)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	1244374
2787	11.3	3.3	3.7	chr14	99307585	99307814	(7735904)	C	MSTC	LTR/ERVL-MaLR	(0)	428	201	1249823
2188	16.0	0.0	0.0	chr14	99307815	99308126	(7735592)	C	AluSz6	SINE/Alu	(0)	312	1	1249824
3270	22.3	7.4	2.6	chr14	100761961	100762498	(6281220)	+	L1MB8	LINE/L1	5780	6349	(2)	1252355
2603	13.3	3.7	0.0	chr14	101713965	101714376	(5329342)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	1253528
1631	19.4	2.3	2.9	chr14	101714377	101714727	(5328991)	C	MLT1A0	LTR/ERVL-MaLR	(16)	349	1	1253529
501	29.6	6.1	5.3	chr14	102421680	102421907	(4621811)	C	MIRb	SINE/MIR	(19)	249	20	1254890
1646	24.0	8.4	5.0	chr14	102422004	102422274	(4621444)	+	L1ME3F	LINE/L1	5517	5798	(445)	1254891
15	16.1	2.9	0.0	chr14	102777688	102777722	(4265996)	+	(GGCG)n	Simple_repeat	1	36	(0)	1255669
873	22.4	19.8	1.2	chr14	103410111	103410431	(3633287)	C	MSTD	LTR/ERVL-MaLR	(1)	395	1	1256770
787	28.8	9.2	5.1	chr14	103410432	103410538	(3633180)	C	L1ME3G	LINE/L1	(722)	202	97	1256769
723	22.6	1.9	0.6	chr14	103410561	103410719	(3632999)	+	AluJo	SINE/Alu	143	303	(9)	1256771
458	27.3	6.5	7.7	chr14	105058374	105058652	(1985066)	+	L1ME4b	LINE/L1	127	399	(493)	1259185
23	7.5	12.5	0.0	chr14	105093493	105093548	(1950170)	+	(CCCGCGC)n	Simple_repeat	1	63	(0)	1259235
13	18.2	6.6	4.6	chr14	105093885	105093945	(1949773)	+	G-rich	Low_complexity	1	65	(0)	1259236
12	20.1	4.7	6.0	chr14	105094007	105094070	(1949648)	+	(CGGAGC)n	Simple_repeat	1	67	(0)	1259237
214	33.6	5.3	1.8	chr14	105094109	105094217	(1949501)	C	L2c	LINE/L2	(0)	3387	3275	1259238
1320	19.5	14.5	4.4	chr14	105922358	105922722	(1120996)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	1260127
1262	16.9	10.4	7.4	chr14	106882797	106883160	(160558)	C	L1MC3	LINE/L1	(1)	7784	7409	1261163
3396	10.1	0.2	0.9	chr14	106883179	106883718	(160000)	+	TAR1	Satellite/telo	484	1019	(1092)	1261164
2251	6.7	4.8	1.1	chr15	20340242	20344102	(81647087)	+	(AGCCAGCCA)n	Simple_repeat	1	4048	(0)	1263201
2689	5.8	0.0	0.0	chr15	22987615	22987923	(79003266)	+	AluY	SINE/Alu	1	309	(2)	1266675
1535	18.6	1.5	4.7	chr15	22987924	22988138	(79003051)	+	MLT1A0	LTR/ERVL-MaLR	162	365	(0)	1266674
380	30.9	12.5	2.6	chr15	22988141	22988449	(79002740)	+	MLT1C	LTR/ERVL-MaLR	72	415	(52)	1266676
2212	12.3	0.7	0.0	chr15	23521353	23521660	(78469529)	+	AluSx	SINE/Alu	1	310	(2)	1267562
1628	22.8	1.9	3.5	chr15	23521661	23521851	(78469338)	C	MSTD-int	LTR/ERVL-MaLR	(1538)	197	9	1267561
1251	21.4	14.5	1.2	chr15	23521861	23522200	(78468989)	C	MSTD	LTR/ERVL-MaLR	(0)	396	4	1267561
1391	19.4	1.7	3.0	chr15	28932844	28932865	(73058324)	+	MLT1A0	LTR/ERVL-MaLR	72	93	(272)	1274751
2215	16.7	3.3	0.8	chr15	28932866	28933251	(73057938)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1274752
2413	16.4	1.3	0.0	chr15	29052666	29053055	(72938134)	C	MSTD	LTR/ERVL-MaLR	(0)	396	2	1274930
883	21.3	13.0	2.2	chr15	30049202	30049493	(71941696)	C	MSTD	LTR/ERVL-MaLR	(0)	396	42	1276439
1108	15.4	0.0	2.5	chr15	30049495	30049656	(71941533)	C	AluJo	SINE/Alu	(154)	158	1	1276444
18	29.9	3.7	2.7	chr15	30904028	30904134	(71087055)	+	(CGCGGC)n	Simple_repeat	1	111	(0)	1277837
2009	18.9	4.0	0.0	chr15	31056562	31056941	(70934248)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1278030
564	26.6	6.2	4.3	chr15	31056942	31057174	(70934015)	+	HAL1ME	LINE/L1	1665	1923	(584)	1278029
2469	14.7	5.5	0.5	chr15	31135553	31135962	(70855227)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	1278150
1450	18.6	14.0	4.8	chr15	31207717	31208019	(70783170)	+	MSTD	LTR/ERVL-MaLR	1	353	(43)	1278276
2133	13.0	0.3	0.7	chr15	31208020	31208319	(70782870)	+	AluSx1	SINE/Alu	1	299	(13)	1278277
2722	14.2	4.7	0.0	chr15	31239437	31239844	(70751345)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	1278335
1034	19.8	3.8	1.2	chr15	31430071	31430325	(70560864)	+	L1ME3D	LINE/L1	5070	5331	(815)	1278584
1676	16.4	10.6	3.9	chr15	31430331	31430691	(70560498)	C	MSTD	LTR/ERVL-MaLR	(0)	396	9	1278589
2516	11.2	8.2	0.0	chr15	31785882	31786274	(70204915)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	1279030
1862	15.7	8.6	2.4	chr15	34303560	34303930	(67687259)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1282638
3067	17.7	7.6	3.0	chr15	34303933	34304670	(67686519)	C	L1MB7	LINE/L1	(38)	6146	5372	1282639
13	17.6	3.3	8.1	chr15	34988252	34988311	(67002878)	+	(GCGGC)n	Simple_repeat	1	62	(0)	1283721
282	29.7	8.9	3.7	chr15	37023260	37023504	(64967685)	C	L1M5	LINE/L1	(1251)	4895	4637	1286412
22	7.4	0.0	0.0	chr15	37111110	37111138	(64880051)	+	(GT)n	Simple_repeat	1	29	(0)	1286531
531	26.4	8.2	1.0	chr15	39782997	39783199	(62207990)	+	MIRc	SINE/MIR	31	249	(19)	1290164
252	29.1	8.5	0.0	chr15	40694881	40694966	(61296223)	+	SVA_A	Retroposon/SVA	218	311	(1076)	1291741
528	14.0	0.0	0.0	chr15	40694892	40695002	(61296187)	C	FRAM	SINE/Alu	(81)	221	1	1291742
1616	18.0	8.8	6.5	chr15	42179785	42180170	(59811019)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1294681
13	21.7	0.0	0.0	chr15	44289078	44289109	(57702080)	+	(GTG)n	Simple_repeat	1	32	(0)	1298572
654	30.2	7.3	8.2	chr15	44548436	44548544	(57442645)	+	L1M5	LINE/L1	4771	4876	(1270)	1299141
1446	19.5	12.9	1.7	chr15	44548545	44548894	(57442295)	C	MSTD	LTR/ERVL-MaLR	(0)	396	2	1299143
2369	10.2	0.3	0.0	chr15	50335617	50335920	(51655269)	+	AluSg	SINE/Alu	1	305	(5)	1307528
322	35.7	9.4	6.0	chr15	50335921	50335955	(51655234)	C	L1MEd	LINE/L1	(6049)	176	146	1307520
1064	14.2	7.7	7.7	chr15	50335988	50336068	(51655121)	+	Tigger2b_Pri	DNA/TcMar-Tigger	1	88	(980)	1307529
2203	12.2	0.0	1.0	chr15	50336069	50336372	(51654817)	+	AluSx1	SINE/Alu	1	301	(11)	1307530
2308	11.1	0.3	0.3	chr15	50981804	50982109	(51009080)	+	AluSp	SINE/Alu	1	306	(7)	1308885
2036	17.4	5.1	1.1	chr15	50982110	50982317	(51008872)	+	MSTD	LTR/ERVL-MaLR	176	393	(3)	1308884
344	25.7	5.4	5.4	chr15	50982318	50982330	(51008859)	+	L3	LINE/CR1	4045	4056	(43)	1308881
18	0.0	0.0	0.0	chr15	55498594	55498613	(46492576)	+	(A)n	Simple_repeat	1	20	(0)	1315685
2496	6.3	0.3	1.9	chr15	55498624	55498939	(46492250)	+	AluSp	SINE/Alu	1	311	(2)	1315686
12	24.0	4.5	0.0	chr15	56887288	56887331	(45103858)	+	(GCCGC)n	Simple_repeat	1	46	(0)	1317809
1402	24.7	3.8	5.5	chr15	56945696	56946098	(45045091)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1317903
2542	28.4	11.2	3.6	chr15	56946099	56946798	(45044391)	C	L1MEc	LINE/L1	(4990)	1410	666	1317902
1265	22.6	13.9	3.4	chr15	56956905	56957257	(45033932)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1317913
3828	20.5	8.8	1.3	chr15	56957258	56958124	(45033065)	C	L1ME1	LINE/L1	(5044)	2043	1115	1317907
1678	18.8	6.8	8.5	chr15	59311666	59312067	(42679122)	+	MSTD	LTR/ERVL-MaLR	2	396	(0)	1321812
967	19.9	16.4	3.8	chr15	62432247	62432538	(39558651)	C	MLT1A0	LTR/ERVL-MaLR	(2)	363	28	1326901
189	12.9	0.0	0.0	chr15	62432560	62432590	(39558599)	+	MIRc	SINE/MIR	199	229	(39)	1326902
456	23.5	0.0	8.7	chr15	63243601	63243726	(38747463)	+	MER5B	DNA/hAT-Charlie	16	130	(48)	1328223
1485	23.8	4.1	4.8	chr15	63243747	63244143	(38747046)	C	MSTD	LTR/ERVL-MaLR	(2)	394	1	1328224
1640	21.4	6.2	7.6	chr15	64663057	64663598	(37327591)	C	L2	LINE/L2	(567)	2852	2319	1330928
270	21.9	3.0	5.0	chr15	64663608	64663708	(37327481)	C	L2-3_Crp	LINE/L2	(1112)	984	886	1330929
428	29.9	8.0	6.8	chr15	64941043	64941264	(37049925)	C	L1M2	LINE/L1	(1637)	4506	4282	1331561
977	18.4	1.8	0.7	chr15	64941291	64941488	(37049701)	C	MSTD	LTR/ERVL-MaLR	(0)	428	217	1331562
959	16.1	7.9	0.0	chr15	65212343	65212516	(36778673)	C	MER5A	DNA/hAT-Charlie	(0)	189	1	1332127
44	13.7	1.6	8.5	chr15	65319137	65319247	(36671942)	+	(TCT)n	Simple_repeat	1	103	(0)	1332389
1639	20.3	4.0	4.0	chr15	66034723	66035118	(35956071)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1333863
325	31.9	0.0	0.0	chr15	66035120	66035213	(35955976)	+	MIRb	SINE/MIR	164	257	(11)	1333868
18	33.6	1.4	0.0	chr15	66035229	66035300	(35955889)	+	(TAC)n	Simple_repeat	1	73	(0)	1333869
360	30.1	10.4	0.7	chr15	66936209	66936355	(35054834)	+	MIRb	SINE/MIR	70	232	(36)	1335743
1491	16.2	7.2	1.0	chr15	67863055	67863354	(34127835)	+	MER92D	LTR/ERV1	1	320	(0)	1337257
346	36.1	6.7	0.0	chr15	67863995	67864174	(34127015)	C	MIRc	SINE/MIR	(53)	215	23	1337258
1580	26.5	2.4	4.0	chr15	67871796	67872301	(34118888)	+	L1M5	LINE/L1	5292	5789	(405)	1337273
931	23.2	3.3	2.4	chr15	67872312	67872524	(34118665)	C	MSTD	LTR/ERVL-MaLR	(0)	457	183	1337274
1973	15.8	0.0	3.2	chr15	67872525	67872840	(34118349)	C	AluJo	SINE/Alu	(6)	306	1	1337275
2239	16.5	0.8	4.4	chr15	67931734	67932046	(34059143)	C	MSTD	LTR/ERVL-MaLR	(0)	396	98	1337411
1657	17.3	2.3	2.7	chr15	67932047	67932346	(34058843)	C	AluJo	SINE/Alu	(13)	299	1	1337412
1290	21.1	1.2	1.6	chr15	67955311	67955565	(34035624)	+	MLT1F1	LTR/ERVL-MaLR	54	307	(262)	1337455
982	21.0	7.7	2.8	chr15	67955583	67955884	(34035305)	C	MSTD	LTR/ERVL-MaLR	(0)	396	42	1337457
3955	8.7	0.2	6.9	chr15	68506551	68507156	(33484033)	+	PRIMA4_LTR	LTR/ERV1	30	594	(0)	1338473
1083	23.2	9.3	1.7	chr15	68507179	68507467	(33483722)	C	MSTD	LTR/ERVL-MaLR	(83)	313	1	1338472
18	3.8	0.0	3.5	chr15	68578895	68578923	(33412266)	+	(TCC)n	Simple_repeat	1	29	(0)	1338603
16	33.4	1.3	1.3	chr15	68578935	68579011	(33412178)	+	(TCCC)n	Simple_repeat	1	78	(0)	1338604
221	32.2	13.6	1.4	chr15	69000755	69000902	(32990287)	C	L2b	LINE/L2	(202)	3173	3005	1339428
213	33.5	2.9	1.3	chr15	69000972	69001128	(32990061)	+	MIR	SINE/MIR	59	220	(48)	1339429
288	33.5	3.6	3.6	chr15	69114189	69114374	(32876815)	+	L2c	LINE/L2	2982	3168	(219)	1339650
22	13.4	2.3	2.3	chr15	69582554	69582596	(32408593)	+	(TA)n	Simple_repeat	1	44	(0)	1340522
1855	22.9	3.0	0.3	chr15	69582630	69583014	(32408175)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1340523
1679	23.9	3.0	0.5	chr15	69889496	69889881	(32101308)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1341097
1681	18.6	6.6	1.9	chr15	70151513	70151889	(31839300)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1341571
377	26.4	8.1	4.0	chr15	70151914	70152107	(31839082)	C	MIR3	SINE/MIR	(7)	201	3	1341572
671	30.1	7.6	1.6	chr15	70293883	70294189	(31697000)	+	LTR82B	LTR/ERVL	491	817	(13)	1341878
269	28.9	3.4	3.4	chr15	70294254	70294371	(31696818)	+	MIR	SINE/MIR	2	119	(143)	1341879
308	33.0	12.1	7.8	chr15	70294349	70294696	(31696493)	C	L2b	LINE/L2	(21)	3354	2990	1341880
979	32.6	7.1	3.7	chr15	70320881	70321367	(31669822)	+	L3	LINE/CR1	3584	4088	(11)	1341941
403	25.6	10.0	3.9	chr15	70374419	70374625	(31616564)	C	MIRb	SINE/MIR	(2)	266	46	1342022
253	17.6	4.2	6.8	chr15	70374693	70374765	(31616424)	C	LTR54	LTR/ERV1	(38)	472	402	1342023
2815	15.2	0.6	3.1	chr15	71747410	71747892	(30243297)	C	LTR44	LTR/ERV1	(0)	519	49	1344284
14	23.4	3.0	5.8	chr15	73052019	73052085	(28939104)	+	GA-rich	Low_complexity	1	69	(0)	1346523
22	23.7	5.8	0.0	chr15	73052219	73052287	(28938902)	+	(GC)n	Simple_repeat	1	73	(0)	1346524
28	0.0	0.0	3.2	chr15	73052293	73052323	(28938866)	+	(CCCGCC)n	Simple_repeat	1	31	(0)	1346525
16	13.2	0.0	0.0	chr15	73052406	73052430	(28938759)	+	(C)n	Simple_repeat	1	25	(0)	1346526
12	16.5	5.9	0.0	chr15	73052443	73052476	(28938713)	+	(CTCCC)n	Simple_repeat	1	36	(0)	1346527
19	17.9	1.9	3.6	chr15	73052520	73052573	(28938616)	+	G-rich	Low_complexity	1	55	(0)	1346528
13	10.5	6.5	0.0	chr15	73052629	73052659	(28938530)	+	(GCTGCC)n	Simple_repeat	1	33	(0)	1346529
21	15.4	4.8	6.9	chr15	73052747	73052829	(28938360)	+	G-rich	Low_complexity	1	87	(0)	1346530
329	34.1	3.5	6.8	chr15	73690172	73690347	(28300842)	C	L2b	LINE/L2	(0)	3375	3206	1347552
1102	20.7	7.0	2.5	chr15	73690405	73690726	(28300463)	C	MSTD	LTR/ERVL-MaLR	(0)	408	27	1347553
603	31.2	7.2	6.3	chr15	73690738	73691165	(28300024)	C	L2b	LINE/L2	(350)	3069	2638	1347552
968	16.0	5.6	0.0	chr15	74944990	74945158	(27046031)	C	AluJb	SINE/Alu	(8)	304	126	1349836
1255	20.9	3.2	4.4	chr15	74945161	74945359	(27045830)	C	MSTD	LTR/ERVL-MaLR	(45)	351	159	1349835
1785	12.1	0.4	0.0	chr15	74945360	74945616	(27045573)	C	AluSq2	SINE/Alu	(55)	258	1	1349837
19	21.5	1.5	4.5	chr15	74956809	74956873	(27034316)	+	(GCCCC)n	Simple_repeat	1	66	(0)	1349865
14	10.3	3.0	2.9	chr15	74956911	74956943	(27034246)	+	G-rich	Low_complexity	1	34	(0)	1349866
428	28.8	3.0	1.8	chr15	74956962	74957124	(27034065)	C	MamRep1879	DNA/hAT-Tip100?	(36)	180	16	1349867
991	20.6	11.4	2.9	chr15	78148708	78148979	(23842210)	+	AluJo	SINE/Alu	1	298	(14)	1355314
250	29.9	20.5	1.0	chr15	78149002	78149099	(23842090)	+	L2a	LINE/L2	3285	3406	(20)	1355307
16	22.3	2.0	2.0	chr15	78149437	78149485	(23841704)	+	(GCAG)n	Simple_repeat	1	50	(0)	1355315
2188	17.1	3.1	1.0	chr15	79576891	79577273	(22413916)	C	MSTC	LTR/ERVL-MaLR	(1)	427	37	1358059
554	26.3	5.2	4.0	chr15	79722191	79722416	(22268773)	+	MLT1K	LTR/ERVL-MaLR	367	595	(0)	1358271
16	13.2	0.0	0.0	chr15	79722446	79722470	(22268719)	+	(A)n	Simple_repeat	1	25	(0)	1358272
1659	27.4	5.7	3.0	chr15	80194917	80195413	(21795776)	+	ERVL-E-int	LTR/ERVL	3822	4332	(1335)	1359151
1934	15.3	10.6	1.4	chr15	80195442	80195793	(21795396)	C	MSTD	LTR/ERVL-MaLR	(8)	388	1	1359153
2090	16.0	5.3	7.4	chr15	80492941	80493345	(21497844)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1359599
20	24.8	2.7	2.6	chr15	82810046	82810077	(19181112)	+	(GGCTGG)n	Simple_repeat	1	60	(17)	1363497
13	6.5	5.6	5.3	chr15	82810078	82810113	(19181076)	+	G-rich	Low_complexity	1	38	(0)	1363498
20	24.8	2.7	2.6	chr15	82810114	82810120	(19181069)	+	(GGCTGG)n	Simple_repeat	61	77	(0)	1363497
12	23.4	1.3	9.0	chr15	83107604	83107680	(18883509)	+	G-rich	Low_complexity	1	78	(0)	1364073
19	17.9	0.0	4.2	chr15	83654105	83654152	(18337037)	+	(GCG)n	Simple_repeat	1	48	(0)	1364951
464	34.8	3.9	6.5	chr15	84919155	84919397	(17071792)	+	L3	LINE/CR1	3275	3509	(590)	1366909
1481	20.1	2.0	14.7	chr15	84919398	84919852	(17071337)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1366910
180	32.4	5.2	10.5	chr15	85168688	85168849	(16822340)	+	MER5A	DNA/hAT-Charlie	19	171	(18)	1367351
184	34.2	8.8	0.0	chr15	85168824	85168896	(16822293)	C	MIR	SINE/MIR	(78)	184	105	1367352
456	27.3	9.8	2.2	chr15	85927533	85927712	(16063477)	+	MER117	DNA/hAT-Charlie	1	195	(2)	1368637
1517	19.7	12.9	3.9	chr15	85927753	85928111	(16063078)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1368638
263	36.4	7.5	2.5	chr15	85962582	85962784	(16028405)	C	MIRb	SINE/MIR	(0)	268	55	1368702
875	17.4	8.4	0.5	chr15	85962857	85963062	(16028127)	C	MSTD	LTR/ERVL-MaLR	(0)	396	118	1368703
2504	17.7	3.7	0.5	chr15	85963063	85963504	(16027685)	C	MSTB2	LTR/ERVL-MaLR	(0)	457	1	1368704
1152	32.9	8.2	6.7	chr15	86092414	86092595	(15898594)	+	L1MEg	LINE/L1	14	204	(5880)	1368928
1926	21.2	1.0	3.2	chr15	86092596	86092999	(15898190)	C	MSTD	LTR/ERVL-MaLR	(1)	395	1	1368929
264	25.7	10.5	16.2	chr15	86241304	86241457	(15749732)	C	MIRb	SINE/MIR	(12)	256	115	1369128
1384	16.6	21.2	1.5	chr15	86241458	86241782	(15749407)	C	MLT1A1	LTR/ERVL-MaLR	(2)	406	1	1369129
264	21.2	1.2	13.0	chr15	86241783	86241831	(15749358)	C	MIRc	SINE/MIR	(157)	111	63	1369130
1342	19.6	2.0	6.0	chr15	87461306	87461686	(14529503)	+	MSTC	LTR/ERVL-MaLR	1	416	(12)	1370835
21	4.2	0.0	0.0	chr15	87461687	87461711	(14529478)	+	(A)n	Simple_repeat	1	25	(0)	1370836
2142	15.7	5.3	0.8	chr15	87923676	87924053	(14067136)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1371523
2104	26.0	12.7	1.2	chr15	88519243	88520098	(13471091)	+	L2a	LINE/L2	706	1674	(1745)	1372538
309	26.7	8.2	0.7	chr15	89894364	89894499	(12096690)	C	L1ME3G	LINE/L1	(407)	517	371	1375096
1963	14.6	0.7	1.3	chr15	90844869	90845170	(11146019)	C	AluJo	SINE/Alu	(12)	300	1	1377226
1875	18.6	8.8	0.6	chr15	91797449	91797811	(10193378)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1378884
3144	24.4	10.5	8.6	chr15	91797812	91798697	(10192492)	+	L1ME3A	LINE/L1	4097	4990	(1156)	1378881
321	21.0	1.0	3.9	chr15	93098032	93098135	(8893054)	C	MER107	DNA/hAT-Charlie	(33)	167	67	1380985
2021	18.5	1.8	0.5	chr15	93098196	93098586	(8892603)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1380986
4332	11.7	1.7	0.8	chr15	93469893	93470530	(8520659)	+	LTR9B	LTR/ERV1	1	644	(0)	1381699
6254	18.6	16.5	4.6	chr15	93505513	93507047	(8484142)	C	MER52A	LTR/ERV1	(0)	1755	1	1381755
1313	21.3	10.0	1.7	chr15	95721420	95721508	(6269681)	C	L1M4a2	LINE/L1	(245)	2411	2301	1384846
1798	19.9	6.9	0.0	chr15	95721509	95721874	(6269315)	C	MSTD	LTR/ERVL-MaLR	(3)	393	1	1384847
1313	21.3	10.0	1.7	chr15	95721875	95722195	(6268994)	C	L1M4a2	LINE/L1	(356)	2300	1963	1384846
17	19.2	2.8	0.0	chr15	96333472	96333507	(5657682)	+	(CT)n	Simple_repeat	1	37	(0)	1385736
15	18.8	2.3	2.2	chr15	96333671	96333714	(5657475)	+	(CCTCCC)n	Simple_repeat	1	45	(0)	1385737
1706	21.1	7.8	0.8	chr15	99482319	99482686	(2508503)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1390180
17	21.4	2.7	6.6	chr15	100341683	100341756	(1649433)	+	(GCC)n	Simple_repeat	1	76	(0)	1391323
1774	20.1	8.1	1.1	chr15	100989424	100989791	(1001398)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1392196
15	15.3	0.0	5.0	chr15	101723942	101723981	(267208)	+	(GCAGG)n	Simple_repeat	1	40	(0)	1393180
17	3.6	0.0	6.2	chr15	101724553	101724584	(266605)	+	(GGGGC)n	Simple_repeat	1	32	(0)	1393181
3841	13.7	2.4	0.7	chr16	10059	11142	(90327203)	C	TAR1	Satellite/telo	(43)	1103	1	1394056
413	22.8	15.2	2.3	chr16	11186	11356	(90326989)	C	L1MC5a	LINE/L1	(2382)	395	199	1394057
603	32.5	17.5	1.9	chr16	52803	53424	(90284921)	C	L2a	LINE/L2	(135)	3291	2528	1394121
2491	6.1	0.0	0.0	chr16	243973	244267	(90094078)	C	AluY	SINE/Alu	(16)	295	1	1394457
293	19.4	4.0	0.0	chr16	1025186	1025257	(89313088)	C	MER2	DNA/TcMar-Tigger	(3)	342	268	1395420
761	13.7	2.4	2.4	chr16	1075364	1075487	(89262858)	+	AluJb	SINE/Alu	176	299	(13)	1395475
212	20.8	2.9	1.1	chr16	1075835	1076353	(89261992)	+	(CCTCTC)n	Simple_repeat	1	528	(0)	1395476
12	9.5	2.4	9.5	chr16	1783148	1783188	(88555157)	+	(GGCCG)n	Simple_repeat	1	42	(0)	1396376
286	14.3	3.9	0.0	chr16	1783363	1783411	(88554934)	+	AluJo	SINE/Alu	240	290	(22)	1396377
28	34.0	1.5	0.8	chr16	1983983	1984112	(88354233)	+	(CCGGCC)n	Simple_repeat	1	132	(0)	1396745
13	27.0	3.7	4.7	chr16	2007152	2007233	(88331112)	+	G-rich	Low_complexity	1	85	(0)	1396768
2175	10.7	0.7	0.3	chr16	2754290	2754589	(87583756)	C	AluSc5	SINE/Alu	(8)	301	1	1397880
269	13.2	15.9	0.0	chr16	2884388	2884440	(87453905)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	443	1398102
1066	8.3	0.0	0.0	chr16	2884441	2884572	(87453773)	+	AluY	SINE/Alu	1	132	(179)	1398103
2301	9.2	0.0	0.7	chr16	3019727	3020066	(87318279)	C	AluSg	SINE/Alu	(0)	310	1	1398342
19	23.5	2.9	2.9	chr16	3020314	3020381	(87317964)	+	(GGC)n	Simple_repeat	1	70	(0)	1398343
11	7.0	0.0	12.8	chr16	3020504	3020542	(87317803)	+	G-rich	Low_complexity	1	39	(0)	1398344
217	31.4	14.5	5.0	chr16	3264843	3265003	(87073342)	C	L2a	LINE/L2	(1)	3425	3208	1398855
2481	6.9	0.3	0.3	chr16	3500367	3500670	(86837675)	C	AluSz	SINE/Alu	(8)	304	1	1399285
220	32.1	8.7	0.0	chr16	3500675	3500758	(86837587)	+	MIR	SINE/MIR	152	243	(19)	1399286
1444	16.1	8.1	0.4	chr16	4519195	4519468	(85818877)	C	MER21B	LTR/ERVL	(0)	868	572	1401296
478	17.4	0.8	3.4	chr16	4519523	4519624	(85818721)	+	MLT1A1	LTR/ERVL-MaLR	211	364	(93)	1401297
1984	14.9	2.9	2.4	chr16	4519629	4519999	(85818346)	+	MSTB1	LTR/ERVL-MaLR	60	432	(0)	1401298
2391	8.9	0.3	1.6	chr16	4554339	4554653	(85783692)	C	AluY	SINE/Alu	(0)	311	1	1401389
935	18.5	8.1	1.4	chr16	8178060	8178267	(82160078)	+	ORSL	DNA/hAT-Tip100	1	223	(52)	1408482
315	26.9	5.6	5.0	chr16	8178306	8178446	(82159899)	C	MIRb	SINE/MIR	(105)	163	22	1408483
1546	20.0	5.1	6.5	chr16	8656722	8657122	(81681223)	C	MSTD	LTR/ERVL-MaLR	(0)	396	2	1409521
672	26.2	17.1	5.8	chr16	10743131	10743681	(79594664)	+	L1MC4	LINE/L1	7222	7847	(195)	1414120
15	29.9	0.0	0.0	chr16	11273513	11273569	(79064776)	+	(TGGCCC)n	Simple_repeat	1	57	(0)	1415286
2305	11.7	0.3	0.0	chr16	12108849	12109155	(78229190)	+	AluSg4	SINE/Alu	1	308	(2)	1417272
2376	16.7	0.7	6.2	chr16	12109156	12109541	(78228804)	C	MSTC	LTR/ERVL-MaLR	(59)	369	1	1417271
610	1.4	0.0	0.0	chr16	14285893	14285964	(76052381)	+	tRNA-Thr-ACG	tRNA	1	72	(3)	1421772
18	10.8	0.0	0.0	chr16	18983990	18984019	(71354326)	+	(GGC)n	Simple_repeat	1	30	(0)	1432377
2040	11.6	0.4	0.0	chr16	19095499	19095775	(71242570)	C	AluSz	SINE/Alu	(0)	312	35	1432678
3402	11.3	1.6	1.0	chr16	19283199	19283682	(71054663)	C	LTR45B	LTR/ERV1	(0)	489	3	1433167
1686	22.3	2.5	3.7	chr16	19283683	19284002	(71054343)	+	MSTD	LTR/ERVL-MaLR	80	396	(0)	1433166
485	20.6	2.8	12.9	chr16	19284065	19284265	(71054080)	+	Charlie7a	DNA/hAT-Charlie	41	220	(52)	1433168
14	25.3	1.6	4.8	chr16	21599902	21599963	(68738382)	+	G-rich	Low_complexity	1	63	(0)	1438247
1351	22.2	11.4	1.7	chr16	22277746	22277922	(68060423)	C	MSTD	LTR/ERVL-MaLR	(0)	396	200	1439725
1953	18.4	0.0	0.7	chr16	22277923	22278232	(68060113)	+	AluJr	SINE/Alu	1	308	(4)	1439726
2404	13.4	7.3	2.5	chr16	22296150	22296419	(68041926)	C	MSTC	LTR/ERVL-MaLR	(0)	428	166	1439783
28	5.8	0.0	0.0	chr16	22296420	22296455	(68041890)	+	(CCATTAAT)n	Simple_repeat	1	36	(0)	1439784
2404	13.4	7.3	2.5	chr16	22296456	22296589	(68041756)	C	MSTC	LTR/ERVL-MaLR	(263)	165	4	1439783
2738	12.4	1.6	5.4	chr16	22908417	22908861	(67429484)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	1441073
17	17.4	3.5	5.1	chr16	23149397	23149453	(67188892)	+	(AGCG)n	Simple_repeat	1	59	(0)	1441521
1135	7.8	0.0	0.7	chr16	25192509	25192650	(65145695)	+	AluSz	SINE/Alu	3	143	(169)	1446417
2305	9.8	0.0	0.3	chr16	25192651	25192946	(65145399)	+	AluSx4	SINE/Alu	1	295	(15)	1446418
218	28.0	12.7	0.0	chr16	25759958	25760081	(64578264)	C	MIRc	SINE/MIR	(85)	183	24	1447651
56	1.9	0.0	0.0	chr16	25760102	25760156	(64578189)	+	(CCCTAA)n	Simple_repeat	1	55	(0)	1447654
1878	15.6	1.1	6.7	chr16	25760191	25760423	(64577922)	C	MLT1B	LTR/ERVL-MaLR	(40)	350	123	1447655
12	24.1	0.0	2.4	chr16	27549594	27549634	(62788711)	+	(CGCCCTG)n	Simple_repeat	1	41	(0)	1451354
23	20.0	2.7	4.0	chr16	27549635	27549665	(62788680)	+	(CCCG)n	Simple_repeat	3	76	(0)	1451355
2487	15.1	12.7	4.5	chr16	29014566	29014785	(61323560)	C	MER51D	LTR/ERV1	(387)	270	1	1454985
1040	15.7	9.7	1.9	chr16	29014798	29015005	(61323340)	+	MSTD	LTR/ERVL-MaLR	88	313	(83)	1454983
1869	11.2	7.1	0.0	chr16	29015032	29015291	(61323054)	+	AluSx1	SINE/Alu	1	280	(32)	1454987
289	26.6	1.2	0.0	chr16	30092840	30092918	(60245427)	C	MIRc	SINE/MIR	(77)	191	112	1457246
264	23.4	1.5	0.0	chr16	30445764	30445827	(59892518)	C	LTR83	LTR/ERVL	(151)	629	565	1458051
238	21.6	16.2	0.0	chr16	30445893	30445980	(59892365)	C	LTR83	LTR/ERVL	(398)	382	278	1458051
1085	8.3	0.0	0.0	chr16	30463060	30463191	(59875154)	+	AluSg7	SINE/Alu	174	305	(4)	1458109
22	6.8	8.3	1.9	chr16	30463220	30463267	(59875078)	+	(TTGT)n	Simple_repeat	1	52	(0)	1458110
989	15.4	0.0	1.8	chr16	30463302	30463466	(59874879)	+	MSTD	LTR/ERVL-MaLR	234	395	(1)	1458108
838	26.2	1.5	0.4	chr16	30463468	30463731	(59874614)	+	L1ME1	LINE/L1	5907	6173	(6)	1458106
17	17.2	0.0	2.4	chr16	31073753	31073793	(59264552)	+	G-rich	Low_complexity	1	41	(0)	1459562
1248	27.1	10.6	5.5	chr16	31333611	31333998	(59004347)	C	LTR16C	LTR/ERVL	(73)	416	4	1460103
4518	19.0	3.3	4.4	chr16	31656655	31657343	(58681002)	C	L1MA9	LINE/L1	(0)	6312	5646	1460664
907	20.9	23.0	2.6	chr16	31657344	31657653	(58680692)	+	MSTD	LTR/ERVL-MaLR	5	396	(0)	1460665
4518	19.9	4.6	3.2	chr16	31657654	31658219	(58680126)	C	L1MA9	LINE/L1	(667)	5645	5061	1460664
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
888	6.7	4.2	0.7	chr16	33340034	33340155	(56998190)	C	LTR13A	LTR/ERVK	(840)	126	1	1462584
404	19.2	1.4	0.0	chr16	34062434	34062506	(56275839)	+	AluSz6	SINE/Alu	225	298	(14)	1463557
316	25.0	0.0	0.0	chr16	34062726	34062789	(56275556)	+	AluYa8	SINE/Alu	223	286	(24)	1463558
390	15.6	3.0	0.0	chr16	34062893	34062956	(56275389)	+	AluYj4	SINE/Alu	224	289	(22)	1463559
330	24.4	1.2	2.4	chr16	34071698	34071779	(56266566)	+	AluJb	SINE/Alu	208	288	(24)	1463578
26	2.1	7.5	3.5	chr16	34699521	34699573	(55638772)	+	(TGATGATTCCAT)n	Simple_repeat	1	57	(0)	1464055
7549	4.2	6.0	0.2	chr16	46554268	46555216	(43783129)	+	LTR13	LTR/ERVK	1	1007	(0)	1465596
362	31.0	7.7	4.0	chr16	46727004	46727154	(43611191)	C	MIRb	SINE/MIR	(66)	202	46	1465904
15	10.0	2.9	2.9	chr16	46727240	46727273	(43611072)	+	(AGGTGC)n	Simple_repeat	1	35	(0)	1465905
2077	14.2	9.3	0.0	chr16	46754342	46754711	(43583634)	+	MSTC	LTR/ERVL-MaLR	17	396	(32)	1465962
399	28.3	6.9	2.8	chr16	46754712	46754901	(43583444)	+	HAL1	LINE/L1	1470	1672	(835)	1465960
1837	23.2	9.3	1.4	chr16	48686946	48687447	(41650898)	+	Charlie17b	DNA/hAT-Charlie	441	986	(218)	1469248
13428	15.3	5.0	5.0	chr16	50510761	50512500	(39825845)	C	L1MA9	LINE/L1	(1)	7730	5976	1472645
1656	19.5	10.4	0.3	chr16	50512501	50512855	(39825490)	+	MSTD	LTR/ERVL-MaLR	2	396	(0)	1472646
13428	16.3	5.9	7.8	chr16	50512856	50513098	(39825247)	C	L1MA9	LINE/L1	(1584)	5975	5722	1472645
36	0.0	0.0	0.0	chr16	50693466	50693499	(39644846)	+	(GCTGCGGG)n	Simple_repeat	1	34	(0)	1473002
12	22.7	0.0	10.1	chr16	50693502	50693570	(39644775)	+	G-rich	Low_complexity	1	69	(0)	1473003
26	6.2	0.0	0.0	chr16	50693580	50693613	(39644732)	+	(CCGGAG)n	Simple_repeat	1	34	(0)	1473004
402	28.9	3.6	2.9	chr16	51721003	51721141	(38617204)	C	MER102a	DNA/hAT-Charlie	(195)	135	1	1474860
2334	17.7	0.2	0.8	chr16	51801925	51802322	(38536023)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1474986
18	3.4	0.0	8.3	chr16	54286943	54286980	(36051365)	+	(GCGGG)n	Simple_repeat	1	34	(0)	1479235
2214	17.1	0.8	4.6	chr16	55143562	55143973	(35194372)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1480844
2337	10.7	2.4	0.0	chr16	56413241	56413531	(33924814)	+	AluSx	SINE/Alu	2	299	(13)	1483002
2042	18.4	2.5	2.0	chr16	57324872	57325265	(33013080)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1484836
1502	21.8	6.9	5.3	chr16	57325266	57325425	(33012920)	+	L1M5	LINE/L1	5516	5671	(502)	1484822
2058	15.2	8.3	1.1	chr16	58366862	58367228	(31971117)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1486935
1098	25.7	6.4	7.5	chr16	58388551	58388602	(31949743)	C	L2a	LINE/L2	(152)	3274	3211	1486990
1854	16.1	9.3	4.8	chr16	58388603	58388979	(31949366)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1486992
1613	16.8	4.0	0.4	chr16	58692304	58692565	(31645780)	+	AluJr	SINE/Alu	10	281	(31)	1487639
33	0.0	0.0	0.0	chr16	58692567	58692597	(31645748)	+	(AAAATA)n	Simple_repeat	1	31	(0)	1487640
2276	14.2	7.1	2.1	chr16	58692598	58692768	(31645577)	+	MSTD	LTR/ERVL-MaLR	227	394	(2)	1487638
7930	16.1	7.9	4.8	chr16	58692769	58692993	(31645352)	C	L1M4	LINE/L1	(5101)	2416	2216	1487636
2499	7.1	0.3	0.0	chr16	60210882	60211178	(30127167)	C	AluY	SINE/Alu	(13)	298	1	1489946
1888	25.3	2.8	8.8	chr16	60211179	60211229	(30127116)	+	LTR49-int	LTR/ERV1	801	807	(5524)	1489944
1484	22.5	0.3	2.5	chr16	60211247	60211565	(30126780)	+	MSTD	LTR/ERVL-MaLR	85	396	(0)	1489947
325	26.4	4.5	2.8	chr16	66406371	66406494	(23931851)	C	MIR3	SINE/MIR	(88)	174	41	1499672
267	30.0	4.2	0.0	chr16	66519912	66520001	(23818344)	+	LTR88a	LTR/Gypsy?	298	391	(425)	1499886
13	27.4	1.9	1.8	chr16	67247497	67247550	(23090795)	+	G-rich	Low_complexity	1	55	(0)	1501307
15	8.8	0.0	0.0	chr16	68448443	68448466	(21889879)	+	(GGC)n	Simple_repeat	1	24	(0)	1503545
180	29.8	0.0	0.0	chr16	70347201	70347247	(19991098)	+	MamSINE1	SINE/tRNA-RTE	38	84	(206)	1507782
11	14.8	4.9	4.7	chr16	74813188	74813228	(15525117)	+	G-rich	Low_complexity	1	43	(0)	1515494
1836	15.8	1.0	1.7	chr16	75474284	75474574	(14863771)	C	AluJb	SINE/Alu	(22)	290	2	1516878
1385	22.4	5.8	9.9	chr16	75474575	75474805	(14863540)	C	MSTD	LTR/ERVL-MaLR	(44)	352	132	1516877
2103	13.9	0.0	0.0	chr16	75474806	75475092	(14863253)	C	AluSz	SINE/Alu	(22)	290	4	1516879
2081	11.9	1.1	0.0	chr16	79373360	79373677	(10964668)	C	AluSg	SINE/Alu	(0)	310	1	1523424
2443	15.1	4.9	2.2	chr16	79373678	79373914	(10964431)	+	MSTC	LTR/ERVL-MaLR	192	425	(3)	1523423
278	24.5	0.0	0.0	chr16	79568337	79568389	(10769956)	+	MIRb	SINE/MIR	26	78	(190)	1523796
13	17.6	0.0	6.8	chr16	79770540	79770583	(10567762)	+	(CCCGC)n	Simple_repeat	1	44	(0)	1524122
18	15.5	0.0	0.0	chr16	79770586	79770615	(10567730)	+	A-rich	Low_complexity	1	30	(0)	1524123
1980	17.9	6.6	1.6	chr16	82087654	82088028	(8250317)	C	MSTD	LTR/ERVL-MaLR	(0)	396	2	1528616
21	21.1	5.2	4.4	chr16	85027948	85028056	(5310289)	+	G-rich	Low_complexity	1	109	(0)	1534048
1071	12.1	2.3	0.6	chr16	86735693	86735866	(3602479)	C	MSTC	LTR/ERVL-MaLR	(0)	428	252	1537160
862	20.3	6.1	4.6	chr16	86735863	86736191	(3602154)	C	MSTC	LTR/ERVL-MaLR	(63)	365	1	1537161
40	2.5	0.0	0.0	chr16	87492912	87492952	(2845393)	+	(CGGCGA)n	Simple_repeat	1	41	(0)	1538508
365	28.8	3.8	9.8	chr16	89241276	89241529	(1096816)	C	LTR55	LTR/ERVL?	(181)	367	130	1540967
1115	19.1	0.0	3.3	chr16	89241689	89241898	(1096447)	C	AluJr	SINE/Alu	(0)	312	110	1540968
1852	14.5	1.0	1.6	chr16	89241902	89242205	(1096140)	+	AluSz6	SINE/Alu	1	302	(10)	1540969
2078	19.9	7.0	1.2	chr16	89374791	89375298	(963047)	+	Tigger2b_Pri	DNA/TcMar-Tigger	2	541	(527)	1541160
894	18.9	0.0	6.5	chr16	89375315	89375464	(962881)	+	FAM	SINE/Alu	8	151	(34)	1541161
2089	9.3	2.0	0.7	chr16	89375465	89375755	(962590)	C	AluSq2	SINE/Alu	(18)	295	1	1541162
351	27.1	11.0	0.0	chr17	510520	510648	(82746793)	+	MIRb	SINE/MIR	61	205	(63)	1545286
12	19.0	7.1	0.0	chr17	980218	980259	(82277182)	+	(CCTCTT)n	Simple_repeat	1	45	(0)	1546161
15	29.9	4.1	0.0	chr17	2399596	2399668	(80857773)	+	(GGCCCG)n	Simple_repeat	1	76	(0)	1549021
14	8.1	0.0	3.6	chr17	2593500	2593572	(80663869)	+	(GCCCG)n	Simple_repeat	1	70	(0)	1549530
30	0.0	0.0	0.0	chr17	2593591	2593618	(80663823)	+	(GGC)n	Simple_repeat	1	28	(0)	1549531
14	7.8	3.5	3.3	chr17	2593667	2593695	(80663746)	+	(GCG)n	Simple_repeat	1	30	(0)	1549532
38	0.0	0.0	0.0	chr17	2776824	2776858	(80480583)	+	(GGA)n	Simple_repeat	1	35	(0)	1549928
944	13.7	0.8	0.0	chr17	3948588	3948718	(79308723)	C	AluJo	SINE/Alu	(180)	132	1	1552057
563	33.6	7.1	2.6	chr17	3989872	3990106	(79267335)	C	L1ME4a	LINE/L1	(0)	6124	5873	1552144
2324	10.2	0.0	0.0	chr17	3990107	3990400	(79267041)	C	AluSg4	SINE/Alu	(16)	294	1	1552145
2221	10.7	0.0	0.0	chr17	4399350	4399648	(78857793)	C	AluSq2	SINE/Alu	(12)	301	3	1552975
1581	15.6	9.3	8.9	chr17	4399649	4399997	(78857444)	+	MSTD	LTR/ERVL-MaLR	35	396	(0)	1552974
2160	10.7	0.7	0.0	chr17	4400025	4400322	(78857119)	+	AluSx	SINE/Alu	2	301	(11)	1552976
14	0.0	0.0	0.0	chr17	5282377	5282394	(77975047)	+	(GGC)n	Simple_repeat	1	18	(0)	1554825
1115	23.2	9.6	5.5	chr17	5702583	5702961	(77554480)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1555642
2405	17.6	3.6	0.9	chr17	5804297	5804748	(77452693)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	3	1555842
3033	25.2	7.6	12.4	chr17	5804749	5804865	(77452576)	C	L1MDa	LINE/L1	(5638)	995	860	1555841
1761	19.0	10.6	0.0	chr17	5804866	5805218	(77452223)	C	MSTD	LTR/ERVL-MaLR	(0)	396	2	1555843
985	26.2	8.3	5.0	chr17	6439073	6439453	(76817988)	C	MSTD	LTR/ERVL-MaLR	(0)	396	2	1557095
324	31.2	3.4	6.6	chr17	6441568	6441718	(76815723)	+	MIR	SINE/MIR	2	147	(115)	1557103
892	22.6	5.4	4.6	chr17	6441720	6442023	(76815418)	C	MSTC	LTR/ERVL-MaLR	(4)	424	75	1557104
1663	13.8	3.1	0.0	chr17	6442030	6442340	(76815101)	+	L1MA5A	LINE/L1	5977	6297	(0)	1557105
1230	19.8	12.8	6.3	chr17	6770108	6770441	(76487000)	C	MLT1A0	LTR/ERVL-MaLR	(6)	359	1	1557678
2255	9.2	0.3	0.0	chr17	6946376	6946658	(76310783)	+	AluY	SINE/Alu	2	285	(26)	1557948
1338	23.3	7.8	11.0	chr17	6946659	6946995	(76310446)	C	MSTD	LTR/ERVL-MaLR	(55)	341	1	1557947
1628	25.2	7.1	4.0	chr17	6946996	6947651	(76309790)	C	Helitron1Na_Mam	RC/Helitron	(209)	853	37	1557946
1757	19.8	4.1	4.8	chr17	8218110	8218502	(75038939)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	1560349
1278	16.7	1.1	9.3	chr17	8218508	8218680	(75038761)	+	ERVL-B4-int	LTR/ERVL	5120	5287	(427)	1560350
262	23.3	0.0	3.2	chr17	9029215	9029276	(74228165)	C	MIRb	SINE/MIR	(23)	245	186	1561927
211	33.7	13.8	0.6	chr17	9211096	9211277	(74046164)	+	L2	LINE/L2	2871	3080	(339)	1562257
197	17.0	0.0	13.1	chr17	10731202	10731262	(72526179)	C	L2c	LINE/L2	(1)	3386	3334	1565156
889	23.0	9.4	9.4	chr17	12857233	12857606	(70399835)	C	MSTD	LTR/ERVL-MaLR	(4)	392	19	1568784
6192	24.1	7.6	5.0	chr17	12889602	12891287	(70366154)	C	MSTD-int	LTR/ERVL-MaLR	(0)	1735	3	1568844
1516	25.6	4.5	0.6	chr17	12891291	12891656	(70365785)	C	MSTD	LTR/ERVL-MaLR	(13)	383	3	1568844
1579	22.9	5.3	2.6	chr17	13345166	13345550	(69911891)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1569622
1021	18.9	8.4	4.6	chr17	13366920	13367294	(69890147)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	1569658
2084	11.6	2.7	0.0	chr17	14068933	14069216	(69188225)	C	AluJr	SINE/Alu	(20)	292	1	1570862
1266	18.5	14.6	3.2	chr17	14716336	14716660	(68540781)	C	MLT1A0	LTR/ERVL-MaLR	(1)	389	1	1571906
2242	16.8	1.0	5.5	chr17	15961576	15961990	(67295451)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1573977
1714	20.0	6.2	7.1	chr17	15961991	15962020	(67295421)	C	L1MC4	LINE/L1	(858)	7184	7162	1573970
2242	10.0	0.0	0.0	chr17	15962021	15962351	(67295090)	+	AluSx1	SINE/Alu	1	312	(0)	1573978
2129	5.7	4.7	0.0	chr17	16409684	16409946	(66847495)	C	AluY	SINE/Alu	(0)	311	36	1574929
1182	13.9	0.0	0.0	chr17	16409947	16410118	(66847323)	C	AluSx3	SINE/Alu	(10)	301	130	1574930
1085	21.2	3.8	0.0	chr17	16584038	16584315	(66673126)	+	L1M4	LINE/L1	3112	3400	(2746)	1575251
2005	16.4	6.3	2.1	chr17	16590231	16590609	(66666832)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1575261
4908	24.2	5.1	8.7	chr17	16590610	16590975	(66666466)	+	L1MB5	LINE/L1	3124	3401	(2745)	1575260
240	31.8	0.0	0.0	chr17	17303051	17303113	(65954328)	+	L2b	LINE/L2	3238	3300	(75)	1576398
21	26.2	4.5	1.1	chr17	17303357	17303444	(65953997)	+	(CGCGCGC)n	Simple_repeat	1	92	(0)	1576399
364	30.3	6.6	0.5	chr17	17421760	17421945	(65835496)	C	L1M5	LINE/L1	(415)	5747	5550	1576647
1266	23.3	9.1	3.5	chr17	19498162	19498534	(63758907)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1580719
2148	20.0	2.1	0.0	chr17	20931790	20932169	(62325272)	C	MSTD	LTR/ERVL-MaLR	(8)	388	1	1583352
380	26.6	5.0	0.0	chr17	21098845	21098908	(62158533)	C	L1ME2	LINE/L1	(35)	6129	6065	1583652
482	16.7	14.7	1.8	chr17	21098909	21099073	(62158368)	+	L1ME3	LINE/L1	5853	6042	(120)	1583654
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
1545	18.6	0.5	0.9	chr17	26938538	26939277	(56318164)	+	(GAATG)n	Satellite	3	736	(0)	1585994
437	12.7	3.1	0.0	chr17	26939289	26939351	(56318090)	+	AluSz6	SINE/Alu	225	289	(23)	1585995
1545	18.6	0.5	0.9	chr17	26939351	26939821	(56317620)	+	(GAATG)n	Satellite	4	474	(0)	1585996
1451	16.4	0.0	0.4	chr17	27501391	27501623	(55755818)	+	THE1D-int	LTR/ERVL-MaLR	564	795	(836)	1586918
1425	9.2	0.0	0.0	chr17	27501625	27501797	(55755644)	C	AluSx	SINE/Alu	(138)	174	2	1586917
477	30.9	10.0	3.1	chr17	28901943	28902451	(54354990)	+	L2b	LINE/L2	2661	3214	(161)	1589591
13	25.4	3.0	4.4	chr17	28902918	28902983	(54354458)	+	(CCCCGCG)n	Simple_repeat	1	68	(0)	1589592
752	20.9	5.2	2.7	chr17	29240781	29240967	(54016474)	C	MER53	DNA/hAT	(0)	193	2	1590197
12	32.6	0.0	1.8	chr17	29292769	29292823	(53964618)	+	(CCCCT)n	Simple_repeat	1	55	(0)	1590285
13	22.8	3.6	3.5	chr17	29293104	29293158	(53964283)	+	(GCGCGG)n	Simple_repeat	1	57	(0)	1590286
15	25.3	1.9	1.8	chr17	30379573	30379626	(52877815)	+	(GCGGCC)n	Simple_repeat	1	55	(0)	1592485
18	25.5	1.6	3.1	chr17	30600796	30600859	(52656582)	+	(CCG)n	Simple_repeat	1	65	(0)	1592819
16	16.5	3.8	5.5	chr17	31008692	31008744	(52248697)	+	(CCG)n	Simple_repeat	1	55	(0)	1593821
993	4.0	0.0	0.0	chr17	32822870	32822994	(50434447)	+	L1PA5	LINE/L1	6030	6154	(0)	1597471
1992	16.1	7.5	0.6	chr17	33602240	33602596	(49654845)	+	MSTD	LTR/ERVL-MaLR	1	384	(12)	1598976
297	22.8	18.6	8.1	chr17	33602625	33602772	(49654669)	+	L2	LINE/L2	2902	3068	(351)	1598973
690	31.2	12.1	5.9	chr17	35899580	35900283	(47357158)	+	LTR85c	LTR/Gypsy?	24	771	(52)	1603045
1063	31.0	7.7	5.1	chr17	36460057	36460846	(46796595)	C	HAL1	LINE/L1	(608)	1899	1077	1603998
20	13.4	0.0	4.4	chr17	36486832	36486876	(46770565)	+	(GGCG)n	Simple_repeat	1	45	(0)	1604032
1719	19.0	11.1	0.3	chr17	40427531	40427883	(42829558)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1612021
354	35.0	5.3	6.6	chr17	40648547	40648925	(42608516)	+	L2b	LINE/L2	2992	3365	(10)	1612427
2407	17.2	0.0	1.5	chr17	40876893	40877294	(42380147)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1612793
1884	18.1	2.0	7.9	chr17	41645137	41645556	(41611885)	+	MSTD	LTR/ERVL-MaLR	1	395	(1)	1613952
266	30.9	5.0	7.3	chr17	41645557	41645694	(41611747)	C	L1ME4b	LINE/L1	(751)	141	6	1613948
260	34.5	4.5	8.9	chr17	41667243	41667567	(41589874)	C	L2b	LINE/L2	(42)	3333	3024	1613991
806	28.7	0.4	6.1	chr17	42033777	42033867	(41223574)	+	MIRc	SINE/MIR	159	244	(24)	1614808
301	21.1	8.8	11.9	chr17	43232365	43232482	(40024959)	+	MER96B	DNA/hAT-Tip100	1	114	(303)	1617360
2018	19.7	0.5	1.4	chr17	43232486	43232908	(40024533)	+	LTR13	LTR/ERVK	1	419	(588)	1617361
15956	24.5	2.1	1.9	chr17	43339412	43345762	(39911679)	C	HERVK13-int	LTR/ERVK	(0)	8116	1611	1617611
1583	18.6	11.9	4.6	chr17	43710605	43710970	(39546471)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1618457
17	27.4	0.0	4.2	chr17	45132421	45132491	(38124950)	+	G-rich	Low_complexity	1	71	(0)	1621409
33	17.5	0.0	8.5	chr17	45132523	45132628	(38124813)	+	G-rich	Low_complexity	1	106	(0)	1621409
16	28.6	1.7	0.0	chr17	48053193	48053251	(35204190)	+	G-rich	Low_complexity	1	60	(0)	1627194
17	4.5	0.0	4.0	chr17	49003973	49003997	(34253444)	+	(AG)n	Simple_repeat	1	25	(0)	1629014
12	28.2	1.7	3.3	chr17	49004032	49004090	(34253351)	+	(CGCCC)n	Simple_repeat	1	60	(0)	1629015
758	18.7	7.5	3.9	chr17	49061290	49061495	(34195946)	C	L1ME3A	LINE/L1	(0)	6173	5960	1629122
253	22.1	4.2	1.4	chr17	49061496	49061564	(34195877)	+	L2a	LINE/L2	3279	3349	(77)	1629120
1635	23.7	14.3	3.0	chr17	49061574	49061998	(34195443)	+	LTR75	LTR/ERVL	2	494	(68)	1629123
26	0.0	0.0	0.0	chr17	49230741	49230765	(34026676)	+	(GGAGCC)n	Simple_repeat	1	25	(0)	1629472
18	29.0	0.0	1.6	chr17	50206871	50206932	(33050509)	+	(TTTTC)n	Simple_repeat	1	62	(0)	1631313
12	4.7	0.0	7.7	chr17	50561456	50561481	(32695960)	+	(GAG)n	Simple_repeat	1	26	(0)	1632035
13	34.0	0.0	0.0	chr17	50562121	50562175	(32695266)	+	G-rich	Low_complexity	1	55	(0)	1632036
209	30.6	3.9	13.1	chr17	50722028	50722188	(32535253)	+	MER5A	DNA/hAT-Charlie	10	152	(37)	1632317
2353	7.2	0.0	0.3	chr17	50722189	50722495	(32534946)	C	AluSc	SINE/Alu	(3)	306	1	1632318
183	30.1	3.9	13.1	chr17	50722496	50722532	(32534909)	+	MER5A	DNA/hAT-Charlie	153	189	(0)	1632319
1705	17.7	8.1	0.8	chr17	50796317	50796681	(32460760)	C	MSTD	LTR/ERVL-MaLR	(0)	396	3	1632481
12	21.0	5.9	1.9	chr17	51166774	51166824	(32090617)	+	(CGCGCC)n	Simple_repeat	1	54	(0)	1633282
2057	33.4	11.2	5.0	chr17	55517636	55518038	(27739403)	C	L2	LINE/L2	(874)	2545	2106	1639781
1782	20.5	6.3	4.1	chr17	55518039	55518425	(27739016)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1639782
2057	33.4	11.2	5.0	chr17	55518426	55519899	(27737542)	C	L2	LINE/L2	(1314)	2105	536	1639781
13	13.1	0.0	0.0	chr17	56833697	56833721	(26423720)	+	(CGG)n	Simple_repeat	1	25	(0)	1642079
12	20.1	6.2	2.0	chr17	56833757	56833804	(26423637)	+	(GCGGCGC)n	Simple_repeat	1	51	(0)	1642080
2052	14.3	0.7	0.3	chr17	57022080	57022387	(26235054)	C	AluSz	SINE/Alu	(3)	309	1	1642463
1560	19.5	9.1	4.4	chr17	57022467	57022830	(26234611)	C	MSTD	LTR/ERVL-MaLR	(13)	383	1	1642464
4116	21.2	15.2	9.3	chr17	57062676	57063462	(26193979)	C	Zaphod	DNA/hAT-Tip100	(3106)	925	7	1642566
477	23.7	9.2	0.8	chr17	57063574	57063692	(26193749)	+	Arthur1A	DNA/hAT-Tip100	1	130	(47)	1642572
14	31.4	2.1	4.2	chr17	57085116	57085208	(26172233)	+	G-rich	Low_complexity	1	95	(0)	1642628
1304	21.7	8.9	5.5	chr17	57746331	57746710	(25510731)	+	MSTD	LTR/ERVL-MaLR	1	394	(2)	1643763
361	30.0	7.0	0.8	chr17	57746777	57746897	(25510544)	+	MIR	SINE/MIR	25	153	(109)	1643764
805	14.6	3.9	0.0	chr17	58632369	58632491	(24624950)	C	FLAM_C	SINE/Alu	(15)	128	1	1645374
573	19.6	1.4	1.6	chr17	59892530	59892669	(23364772)	C	MIRb	SINE/MIR	(90)	178	38	1648196
1911	19.4	1.8	3.7	chr17	60299254	60299655	(22957786)	C	MSTD	LTR/ERVL-MaLR	(2)	394	1	1648956
13246	13.1	5.8	2.3	chr17	61543316	61543537	(21713904)	C	L1MC1	LINE/L1	(839)	5307	5101	1651215
2410	7.2	0.0	0.0	chr17	61543538	61543830	(21713611)	C	AluY	SINE/Alu	(17)	294	2	1651227
398	35.8	9.1	3.4	chr17	61752782	61752920	(21504521)	C	L2	LINE/L2	(756)	2663	2524	1651545
2386	14.8	5.6	1.5	chr17	61752921	61753330	(21504111)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	1651547
398	35.8	9.1	3.4	chr17	61753331	61753575	(21503866)	C	L2	LINE/L2	(896)	2523	2255	1651545
1147	22.3	16.2	0.9	chr17	61764871	61765205	(21492236)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1651562
11	14.8	4.9	4.7	chr17	63741930	63741970	(19515471)	+	(GGCCGC)n	Simple_repeat	1	43	(0)	1655272
452	26.2	11.0	5.4	chr17	63822804	63823025	(19434416)	C	MIR	SINE/MIR	(6)	256	21	1655418
274	16.1	5.1	0.0	chr17	63834996	63835051	(19422390)	C	MER91B	DNA/hAT-Tip100	(54)	136	78	1655429
13	21.5	0.0	4.8	chr17	63842651	63842692	(19414749)	+	(CCCGC)n	Simple_repeat	1	42	(0)	1655439
23	28.4	4.4	1.7	chr17	63842676	63842810	(19414631)	+	G-rich	Low_complexity	1	138	(0)	1655440
308	21.5	1.5	0.0	chr17	64497593	64497657	(18759784)	+	MER5A	DNA/hAT-Charlie	1	66	(123)	1656726
27	11.5	5.2	1.6	chr17	64661886	64661943	(18595498)	+	(CGG)n	Simple_repeat	1	61	(0)	1657017
25	22.3	1.6	0.0	chr17	64662112	64662174	(18595267)	+	(GCC)n	Simple_repeat	1	64	(0)	1657018
30	7.0	2.9	7.0	chr17	64662354	64662422	(18595019)	+	G-rich	Low_complexity	1	71	(0)	1657019
17	30.7	0.0	1.6	chr17	65056597	65056658	(18200783)	+	(GCC)n	Simple_repeat	1	62	(0)	1657850
13	20.4	5.6	3.5	chr17	65056651	65056704	(18200737)	+	(CGG)n	Simple_repeat	1	57	(0)	1657851
21	11.9	12.5	0.0	chr17	65056717	65056809	(18200632)	+	(GCAGG)n	Simple_repeat	1	104	(0)	1657852
506	22.5	11.2	0.1	chr17	65140043	65140183	(18117258)	C	MIRb	SINE/MIR	(56)	212	53	1658065
353	26.9	15.2	2.6	chr17	65140288	65140588	(18116853)	C	L2c	LINE/L2	(253)	3134	2795	1658066
4639	18.1	2.3	9.8	chr17	65958391	65960016	(17297425)	+	MER52A	LTR/ERV1	587	1755	(0)	1659484
1867	21.4	4.6	9.1	chr17	66154542	66154810	(17102631)	+	L1ME3	LINE/L1	4914	5185	(961)	1659753
1202	22.3	11.1	1.4	chr17	66154813	66155103	(17102338)	+	MSTD	LTR/ERVL-MaLR	1	323	(73)	1659756
23693	8.9	1.8	0.8	chr17	66155105	66158330	(17099111)	+	L1PA7	LINE/L1	16	3239	(3222)	1659757
1992	13.2	3.7	0.0	chr17	67710166	67710454	(15546987)	+	AluSx1	SINE/Alu	1	300	(12)	1662606
15	12.2	0.0	0.0	chr17	67825952	67825978	(15431463)	+	(GCC)n	Simple_repeat	1	27	(0)	1662901
20	13.2	5.6	3.5	chr17	67825998	67826051	(15431390)	+	(CGG)n	Simple_repeat	1	57	(0)	1662902
36	31.8	0.0	0.8	chr17	67826114	67826239	(15431202)	+	GA-rich	Low_complexity	1	126	(0)	1662903
12	5.5	0.0	0.0	chr17	67826262	67826280	(15431161)	+	(GAC)n	Simple_repeat	1	19	(0)	1662904
19	26.2	5.7	2.7	chr17	68101797	68101853	(15155588)	+	(GCCGCC)n	Simple_repeat	1	108	(0)	1663535
13	16.2	4.4	4.3	chr17	68101854	68101898	(15155543)	+	(CCGCC)n	Simple_repeat	1	47	(0)	1663536
17	30.2	1.1	4.4	chr17	68247975	68248063	(15009378)	+	(GGCGC)n	Simple_repeat	1	90	(0)	1663830
15	14.8	2.4	4.8	chr17	68512499	68512539	(14744902)	+	(CGC)n	Simple_repeat	1	42	(0)	1664337
2387	10.1	0.3	0.0	chr17	69394545	69394831	(13862610)	C	AluSx1	SINE/Alu	(24)	288	1	1665689
2308	15.7	7.5	0.0	chr17	70759312	70759707	(12497734)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	1667767
1115	22.6	15.4	0.0	chr17	71317229	71317573	(11939868)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	1668603
1620	20.6	6.4	1.1	chr17	71626482	71626835	(11630606)	+	MLT1A	LTR/ERVL-MaLR	1	374	(0)	1669083
748	30.3	8.2	7.5	chr17	71626836	71627347	(11630094)	+	L1ME1	LINE/L1	369	903	(5497)	1669081
16	12.8	2.9	0.0	chr17	72592852	72592885	(10664556)	+	G-rich	Low_complexity	1	35	(0)	1670654
799	15.7	4.6	0.6	chr17	73195965	73196133	(10061308)	C	MLT1A1	LTR/ERVL-MaLR	(2)	406	225	1671839
534	12.9	1.2	0.0	chr17	73196176	73196260	(10061181)	+	MSTA	LTR/ERVL-MaLR	1	86	(342)	1671840
16	0.0	0.0	0.0	chr17	73210496	73210513	(10046928)	+	(A)n	Simple_repeat	1	18	(0)	1671856
1720	15.6	1.7	5.3	chr17	73210606	73210907	(10046534)	C	AluJo	SINE/Alu	(21)	291	1	1671857
2267	10.9	1.6	0.3	chr17	73273720	73274022	(9983419)	+	AluSx	SINE/Alu	1	307	(5)	1671969
1575	21.1	3.5	6.2	chr17	73274023	73274341	(9983100)	C	MLT1A	LTR/ERVL-MaLR	(65)	309	1	1671968
228	30.6	16.8	0.7	chr17	73274357	73274501	(9982940)	+	L2a	LINE/L2	2403	2575	(844)	1671970
6498	24.3	5.4	4.5	chr17	74093562	74094246	(9163195)	C	MSTD-int	LTR/ERVL-MaLR	(1030)	705	1	1673485
1617	20.7	6.1	3.4	chr17	74094248	74094632	(9162809)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1673485
1590	20.6	11.0	5.1	chr17	74189898	74190291	(9067150)	+	MSTC	LTR/ERVL-MaLR	1	420	(8)	1673659
459	23.0	1.0	0.0	chr17	74190307	74190406	(9067035)	C	MLT1J	LTR/ERVL-MaLR	(331)	181	81	1673658
194	30.8	11.7	1.1	chr17	75262043	75262134	(7995307)	+	MIRc	SINE/MIR	3	105	(163)	1675711
14	19.7	4.2	2.0	chr17	75588997	75589044	(7668397)	+	G-rich	Low_complexity	1	50	(0)	1676427
21	12.2	0.0	0.0	chr17	75589193	75589228	(7668213)	+	(GGC)n	Simple_repeat	1	36	(0)	1676428
889	16.9	5.2	7.9	chr17	76029995	76030100	(7227341)	+	MER33	DNA/hAT-Charlie	34	141	(183)	1677252
1737	19.5	3.0	3.0	chr17	76518115	76518479	(6738962)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	1678193
2228	12.5	0.0	0.0	chr17	76518485	76518787	(6738654)	C	AluSx3	SINE/Alu	(8)	303	1	1678194
2126	18.2	2.8	1.8	chr17	76579549	76579940	(6677501)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1678315
599	29.4	3.2	2.7	chr17	76579941	76580130	(6677311)	+	MIR	SINE/MIR	30	223	(39)	1678314
31	24.3	5.9	0.0	chr17	76697885	76697988	(6559453)	+	GA-rich	Low_complexity	1	110	(0)	1678562
21	33.7	2.4	2.3	chr17	76736257	76736383	(6521058)	+	G-rich	Low_complexity	1	130	(0)	1678635
2225	10.4	0.0	0.0	chr17	77082702	77082999	(6174442)	+	AluSx	SINE/Alu	1	298	(14)	1679404
932	17.9	25.2	5.4	chr17	77083000	77083125	(6174316)	+	MSTD	LTR/ERVL-MaLR	176	333	(63)	1679403
2116	9.8	1.0	0.0	chr17	77083126	77083420	(6174021)	C	AluSq	SINE/Alu	(15)	298	1	1679405
3805	20.0	2.8	2.0	chr17	77711618	77712054	(5545387)	C	L1ME1	LINE/L1	(0)	6352	5915	1680512
1236	17.1	16.6	5.8	chr17	77712055	77712433	(5545008)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	1680513
1862	17.9	11.1	0.3	chr17	78448611	78448963	(4808478)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1681861
17	15.9	0.0	0.0	chr17	80220323	80220357	(3037084)	+	(GGCTCG)n	Simple_repeat	1	35	(0)	1684680
16	21.4	0.0	8.6	chr17	80220366	80220435	(3037006)	+	(CCCGC)n	Simple_repeat	1	70	(0)	1684681
14	9.0	5.1	4.9	chr17	80220512	80220550	(3036891)	+	G-rich	Low_complexity	1	41	(0)	1684682
254	23.5	23.5	0.0	chr17	80755896	80756048	(2501393)	+	L1MEh	LINE/L1	724	923	(1312)	1685484
1382	19.8	10.9	0.0	chr17	80756049	80756351	(2501090)	+	MSTD	LTR/ERVL-MaLR	1	340	(56)	1685485
731	19.0	2.2	3.8	chr17	80756354	80756539	(2500902)	+	L1MA4	LINE/L1	6012	6194	(106)	1685486
2000	11.2	2.0	0.3	chr17	81892192	81892478	(1364963)	+	AluJb	SINE/Alu	1	292	(20)	1686880
2216	20.5	9.4	0.0	chr17	82287274	82287795	(969646)	+	L1MC3	LINE/L1	6263	6838	(947)	1687424
597	21.9	7.8	8.9	chr17	82287796	82287945	(969496)	+	MLT1B	LTR/ERVL-MaLR	1	146	(244)	1687426
925	15.9	0.0	0.0	chr17	82287946	82288077	(969364)	C	FLAM_C	SINE/Alu	(11)	132	1	1687427
597	21.9	7.8	8.9	chr17	82288078	82288197	(969244)	+	MLT1B	LTR/ERVL-MaLR	147	268	(122)	1687426
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
1879	7.3	0.0	13.2	chr17	82518746	82519072	(738369)	C	AluSq	SINE/Alu	(29)	284	1	1687800
18	15.1	4.5	0.0	chr17	82519467	82519510	(737931)	+	(GCGCCC)n	Simple_repeat	1	46	(0)	1687801
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
251	25.4	9.2	4.8	chr18	646010	646133	(79727152)	C	MIRb	SINE/MIR	(99)	169	40	1690170
2161	9.4	2.0	0.0	chr18	713206	713493	(79659792)	+	AluSx	SINE/Alu	12	305	(7)	1690299
2413	6.7	0.3	0.0	chr18	713501	713799	(79659486)	+	AluSc8	SINE/Alu	11	310	(1)	1690300
2524	13.6	5.1	0.7	chr18	9753177	9753585	(70619700)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	1703610
214	32.0	11.5	1.5	chr18	9753679	9753869	(70619416)	+	MIRb	SINE/MIR	15	235	(33)	1703611
1492	20.1	8.2	5.1	chr18	10307172	10307585	(70065700)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	1704384
21	22.1	5.8	4.6	chr18	12076520	12076622	(68296663)	+	(GCA)n	Simple_repeat	1	109	(0)	1706882
20	24.7	2.2	5.4	chr18	12076600	12076689	(68296596)	+	(GCG)n	Simple_repeat	1	92	(0)	1706883
16	0.0	0.0	0.0	chr18	12076854	12076870	(68296415)	+	(T)n	Simple_repeat	1	17	(0)	1706884
660	27.7	11.3	2.5	chr18	14012290	14013005	(66360280)	C	L1ME3D	LINE/L1	(687)	5555	4766	1709803
17	18.7	2.5	8.6	chr18	21704672	21704750	(58668535)	+	G-rich	Low_complexity	1	81	(0)	1713147
2123	13.2	0.0	0.3	chr18	21947048	21947342	(58425943)	C	AluJb	SINE/Alu	(16)	296	3	1713595
1762	17.1	7.9	1.1	chr18	21947343	21947560	(58425725)	+	MSTD	LTR/ERVL-MaLR	161	394	(2)	1713594
4405	16.0	3.8	1.6	chr18	21947561	21948272	(58425013)	+	L1MB5	LINE/L1	5439	6174	(0)	1713593
1552	22.3	7.3	0.8	chr18	22372896	22373265	(58000020)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1714456
917	21.2	6.6	20.0	chr18	23493193	23493438	(56879847)	C	MSTC	LTR/ERVL-MaLR	(0)	428	210	1716316
2319	10.2	0.3	1.0	chr18	23493439	23493751	(56879534)	C	AluSx3	SINE/Alu	(0)	311	1	1716317
2368	7.8	0.0	0.0	chr18	23685234	23685529	(56687756)	C	AluY	SINE/Alu	(15)	296	1	1716675
13	4.7	4.5	0.0	chr18	24271698	24271719	(56101566)	+	(CCT)n	Simple_repeat	1	23	(0)	1717613
26	6.3	0.0	0.0	chr18	24272237	24272270	(56101015)	+	(T)n	Simple_repeat	1	34	(0)	1717614
1403	12.8	22.9	0.0	chr18	24457619	24457907	(55915378)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	1717988
2177	17.6	1.3	1.0	chr18	24744589	24744979	(55628306)	+	MSTD	LTR/ERVL-MaLR	5	396	(0)	1718408
15	4.8	0.0	0.0	chr18	24831957	24831978	(55541307)	+	(CTGC)n	Simple_repeat	1	22	(0)	1718536
1601	21.8	3.1	3.3	chr18	25427123	25427516	(54945769)	+	MSTD	LTR/ERVL-MaLR	1	393	(3)	1719317
491	22.4	11.2	2.0	chr18	26089740	26089885	(54283400)	+	L2c	LINE/L2	3227	3387	(0)	1720303
12	15.2	2.4	7.0	chr18	26090392	26090433	(54282852)	+	(GGCCC)n	Simple_repeat	1	43	(0)	1720304
1577	22.1	6.3	0.5	chr18	27446111	27446435	(52926850)	C	MSTD	LTR/ERVL-MaLR	(0)	396	61	1722414
1298	16.8	0.0	4.5	chr18	27446439	27446658	(52926627)	C	AluJo	SINE/Alu	(101)	211	2	1722415
1648	18.4	9.4	0.9	chr18	28859078	28859427	(51513858)	+	MSTD	LTR/ERVL-MaLR	14	396	(0)	1724277
191	35.7	0.0	0.0	chr18	28859437	28859492	(51513793)	+	MIR	SINE/MIR	6	61	(201)	1724278
2450	17.0	11.0	1.8	chr18	30959394	30959897	(49413388)	C	MLT2B4	LTR/ERVL	(0)	556	1	1727011
258	36.3	11.3	1.3	chr18	31193592	31193750	(49179535)	+	L3	LINE/CR1	3877	4053	(46)	1727354
1958	16.9	12.2	1.6	chr18	31753912	31754291	(48618994)	C	MSTC	LTR/ERVL-MaLR	(2)	426	1	1728151
13	20.1	5.0	0.0	chr18	31942839	31942878	(48430407)	+	(CCGGC)n	Simple_repeat	1	42	(0)	1728479
36	0.0	0.0	0.0	chr18	32020003	32020033	(48353252)	+	(TG)n	Simple_repeat	1	31	(0)	1728649
2079	9.1	0.0	5.4	chr18	32020050	32020347	(48352938)	C	AluSx1	SINE/Alu	(30)	282	1	1728650
353	29.9	8.1	4.4	chr18	32204588	32204658	(48168627)	+	MER103C	DNA/hAT-Charlie	34	102	(195)	1729045
2047	17.7	2.8	1.5	chr18	32204659	32205048	(48168237)	C	MSTD	LTR/ERVL-MaLR	(1)	395	1	1729046
353	29.9	8.1	4.4	chr18	32205049	32205179	(48168106)	+	MER103C	DNA/hAT-Charlie	103	244	(53)	1729045
14381	20.4	3.5	3.0	chr18	33236612	33241429	(47131856)	+	L1MA5A	LINE/L1	729	5640	(1922)	1730471
1501	21.2	9.6	0.8	chr18	33482691	33483051	(46890234)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1730795
4412	16.6	4.7	1.1	chr18	34192193	34192692	(46180593)	+	L1MA8	LINE/L1	4454	4969	(1174)	1731621
2262	16.4	1.3	1.3	chr18	34192693	34193088	(46180197)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1731622
5201	15.4	5.3	0.7	chr18	34193089	34194348	(46178937)	+	L1MA8	LINE/L1	4970	6281	(10)	1731621
14	11.1	0.0	6.1	chr18	34222908	34222940	(46150345)	+	(CCCT)n	Simple_repeat	1	33	(0)	1731665
11671	9.7	0.2	0.7	chr18	34265573	34267160	(46106125)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	1731709
2600	15.0	0.9	1.9	chr18	34406303	34406731	(45966554)	+	MSTC	LTR/ERVL-MaLR	4	428	(0)	1731914
2271	28.4	11.7	10.4	chr18	34583435	34585905	(45787380)	+	HAL1	LINE/L1	1	2507	(0)	1732139
1450	19.0	5.6	4.9	chr18	34923938	34924323	(45448962)	+	L1M4b	LINE/L1	1961	2347	(4660)	1732603
2428	17.2	0.0	0.5	chr18	34924324	34924721	(45448564)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1732604
714	30.8	13.8	2.3	chr18	35087636	35087780	(45285505)	C	L2a	LINE/L2	(1)	3425	3278	1732832
1384	23.0	9.4	1.1	chr18	35087781	35088141	(45285144)	C	MSTD	LTR/ERVL-MaLR	(2)	394	1	1732833
714	30.4	10.3	1.8	chr18	35088142	35088533	(45284752)	C	L2a	LINE/L2	(149)	3277	2817	1732832
217	36.0	12.8	3.8	chr18	35365297	35365727	(45007558)	C	L2a	LINE/L2	(152)	3235	2757	1733208
919	23.9	10.2	12.9	chr18	35895085	35895423	(44477862)	+	MSTD	LTR/ERVL-MaLR	3	331	(65)	1733943
659	21.0	0.0	0.8	chr18	35895424	35895542	(44477743)	C	FLAM_C	SINE/Alu	(24)	119	2	1733944
919	23.9	10.2	12.9	chr18	35895543	35895606	(44477679)	+	MSTD	LTR/ERVL-MaLR	332	394	(2)	1733943
331	29.4	4.5	2.6	chr18	37780230	37781893	(42591392)	+	(CA)n	Simple_repeat	1	1739	(0)	1736524
946	25.7	14.7	6.4	chr18	37781901	37782261	(42591024)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1736525
1365	20.7	10.7	2.8	chr18	38564037	38564208	(41809077)	+	MSTD	LTR/ERVL-MaLR	1	207	(189)	1737555
31	0.0	0.0	0.0	chr18	38564209	38564235	(41809050)	+	(CT)n	Simple_repeat	1	27	(0)	1737556
1365	20.7	10.7	2.8	chr18	38564236	38564424	(41808861)	+	MSTD	LTR/ERVL-MaLR	208	394	(2)	1737555
1080	24.3	8.3	4.5	chr18	44995629	44995964	(35377321)	C	MSTD	LTR/ERVL-MaLR	(46)	350	1	1746251
2206	18.0	3.3	0.8	chr18	47617291	47617676	(32755609)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1750530
1066	19.9	16.4	3.8	chr18	48233042	48233411	(32139874)	+	MSTC	LTR/ERVL-MaLR	1	426	(2)	1751549
12	8.3	3.6	3.5	chr18	48409784	48409811	(31963474)	+	(TCTTT)n	Simple_repeat	1	29	(0)	1751863
16	11.1	0.0	0.0	chr18	48410449	48410477	(31962808)	+	(CCCCG)n	Simple_repeat	1	29	(0)	1751864
16	20.4	4.0	6.3	chr18	49813910	49813985	(30559300)	+	(GGCCGC)n	Simple_repeat	1	79	(0)	1754248
15	16.2	4.7	2.2	chr18	49813962	49814004	(30559281)	+	(GGC)n	Simple_repeat	1	45	(0)	1754249
28122	17.0	7.8	7.8	chr18	52790112	52792754	(27580531)	C	HUERS-P3b-int	LTR/ERV1	(7)	2901	90	1758952
78	6.2	1.0	0.9	chr18	52792755	52792858	(27580427)	+	(ATTCC)n	Simple_repeat	1	105	(0)	1758954
28122	17.0	7.8	7.8	chr18	52792859	52792933	(27580352)	C	HUERS-P3b-int	LTR/ERV1	(7329)	89	25	1758952
1787	20.2	3.8	2.6	chr18	56042029	56042419	(24330866)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1763515
1355	22.6	8.3	3.7	chr18	56482235	56482611	(23890674)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1764162
1969	12.1	0.0	5.7	chr18	56482677	56482973	(23890312)	+	AluSz6	SINE/Alu	1	280	(32)	1764163
1350	19.5	10.8	5.6	chr18	56842144	56842485	(23530800)	C	MSTD	LTR/ERVL-MaLR	(0)	396	35	1764720
1295	26.1	7.1	3.6	chr18	57200487	57200935	(23172350)	+	MLT1C	LTR/ERVL-MaLR	1	466	(1)	1765202
3539	17.6	10.1	4.5	chr18	58905741	58906587	(21466698)	C	L1MC3	LINE/L1	(172)	7613	6714	1768115
282	33.0	3.6	6.0	chr18	61322645	61322844	(19050441)	+	MIRb	SINE/MIR	74	268	(0)	1771750
1500	21.5	4.3	6.7	chr18	62623926	62624140	(17749145)	C	MSTD	LTR/ERVL-MaLR	(2)	394	187	1773741
2136	13.7	0.0	0.0	chr18	62624141	62624432	(17748853)	C	AluSx1	SINE/Alu	(20)	292	1	1773742
51	28.8	3.0	3.0	chr18	62715748	62715977	(17657308)	+	(CGG)n	Simple_repeat	1	237	(0)	1773933
21	25.4	3.4	3.3	chr18	62716075	62716163	(17657122)	+	(CCG)n	Simple_repeat	1	92	(0)	1773934
17	27.3	4.7	4.5	chr18	62716164	62716181	(17657104)	+	(CCTCGG)n	Simple_repeat	1	112	(0)	1773935
299	28.9	13.1	4.2	chr18	62879031	62879091	(17494194)	+	MER5A	DNA/hAT-Charlie	1	60	(129)	1774212
1744	13.5	14.1	3.7	chr18	62879092	62879404	(17493881)	+	MSTD	LTR/ERVL-MaLR	1	358	(38)	1774213
34	0.0	0.0	0.0	chr18	62879405	62879433	(17493852)	+	(TG)n	Simple_repeat	1	29	(0)	1774214
835	23.9	11.1	9.7	chr18	69278503	69278892	(11094393)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1782965
1540	18.8	10.7	1.1	chr18	74421301	74421656	(5951629)	+	MSTD	LTR/ERVL-MaLR	1	394	(2)	1789858
775	25.7	13.7	4.2	chr18	75006221	75007362	(5365923)	C	L1MEd	LINE/L1	(2929)	3217	1928	1790532
18	4.1	0.0	0.0	chr18	75277389	75277413	(5095872)	+	(GAG)n	Simple_repeat	1	25	(0)	1790815
1231	24.1	3.0	6.6	chr18	75277415	75277792	(5095493)	C	MLT1A0	LTR/ERVL-MaLR	(1)	364	1	1790816
1482	11.2	0.5	4.3	chr18	76523147	76523321	(3849964)	C	AluSx4	SINE/Alu	(5)	305	134	1792221
2426	8.9	0.0	0.0	chr18	76523322	76523623	(3849662)	C	AluY	SINE/Alu	(7)	304	3	1792222
2204	15.1	4.6	4.6	chr18	76612964	76613373	(3759912)	C	MSTC	LTR/ERVL-MaLR	(0)	428	19	1792351
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
5485	10.1	23.0	1.1	chr19	246007	247536	(58370080)	C	TAR1	Satellite/telo	(43)	1864	1	1796618
32	0.0	0.0	0.0	chr19	267223	267252	(58350364)	+	(CGCTG)n	Simple_repeat	1	30	(0)	1796658
2287	10.2	0.0	0.3	chr19	594921	595225	(58022391)	+	AluJo	SINE/Alu	3	306	(6)	1797197
652	28.3	7.2	0.3	chr19	789226	789512	(57828104)	C	MLT1C	LTR/ERVL-MaLR	(154)	313	6	1797619
182	20.0	2.0	2.0	chr19	789549	789599	(57828017)	+	L2b	LINE/L2	3117	3167	(208)	1797620
1404	12.8	0.5	5.3	chr19	1141697	1141922	(57475694)	C	AluJo	SINE/Alu	(97)	215	1	1798281
14	11.9	2.4	7.0	chr19	1678975	1679016	(56938600)	+	(GCCCT)n	Simple_repeat	1	43	(0)	1799269
125	20.5	0.1	12.8	chr19	2103932	2104625	(56512991)	+	(CCAACA)n	Simple_repeat	1	695	(0)	1800152
325	32.5	12.5	5.4	chr19	2238402	2239082	(56378534)	C	HAL1	LINE/L1	(195)	2312	1568	1800388
1207	21.4	11.6	7.2	chr19	2663180	2663556	(55954060)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1801375
364	36.9	7.3	4.3	chr19	5567073	5567471	(53050145)	+	HAL1	LINE/L1	880	1291	(1216)	1808365
15	24.9	1.4	5.7	chr19	5567588	5567656	(53049960)	+	(CGCCCC)n	Simple_repeat	1	70	(0)	1808366
12	11.1	0.0	8.6	chr19	5567631	5567665	(53049951)	+	(CCCCA)n	Simple_repeat	1	35	(0)	1808367
27	28.1	4.1	1.6	chr19	5578476	5578615	(53039001)	+	(TCTGTC)n	Simple_repeat	1	143	(0)	1808403
184	25.9	5.8	5.8	chr19	5680276	5680361	(52937255)	+	MIR3	SINE/MIR	86	171	(37)	1808576
2308	5.8	1.4	0.0	chr19	5689664	5689940	(52927676)	C	AluY	SINE/Alu	(30)	281	1	1808597
288	31.2	9.4	0.0	chr19	5689973	5690068	(52927548)	C	MIR	SINE/MIR	(108)	154	49	1808598
669	23.9	5.5	0.0	chr19	6004504	6004708	(52612908)	+	MER20	DNA/hAT-Charlie	3	219	(0)	1809257
16	5.2	0.0	0.0	chr19	6004709	6004728	(52612888)	+	(AC)n	Simple_repeat	1	20	(0)	1809258
22	15.4	0.0	0.0	chr19	6004801	6004836	(52612780)	+	A-rich	Low_complexity	1	36	(0)	1809259
1533	26.0	5.5	7.8	chr19	6491777	6492252	(52125364)	+	MLT1G1	LTR/ERVL-MaLR	104	574	(5)	1810377
1407	18.0	0.4	0.8	chr19	6929946	6930186	(51687430)	C	LTR9A1	LTR/ERV1	(488)	240	1	1811588
237	30.9	5.3	8.0	chr19	6930355	6930446	(51687170)	C	L1MEd	LINE/L1	(6320)	766	679	1811589
2343	11.7	1.9	10.1	chr19	6930447	6930635	(51686981)	C	L1MA3	LINE/L1	(0)	6305	6138	1811590
2037	6.6	0.0	1.2	chr19	7488518	7488775	(51128841)	+	AluSc8	SINE/Alu	1	255	(56)	1813041
13	26.8	1.8	3.5	chr19	7925605	7925661	(50691955)	+	(CCT)n	Simple_repeat	1	58	(0)	1813983
14	15.9	0.0	0.0	chr19	10568987	10569014	(48048602)	+	(CGC)n	Simple_repeat	1	28	(0)	1820117
1775	13.1	3.3	0.8	chr19	11382663	11382785	(47234831)	C	AluJo	SINE/Alu	(176)	136	9	1822182
223	37.2	2.9	0.0	chr19	12563960	12564061	(46053555)	+	L2c	LINE/L2	3054	3158	(229)	1824701
12	18.9	0.0	7.1	chr19	12564401	12564442	(46053174)	+	(CCAC)n	Simple_repeat	1	42	(0)	1824702
206	15.8	2.6	0.0	chr19	12564463	12564500	(46053116)	+	L2	LINE/L2	2807	2845	(574)	1824703
2319	9.8	0.0	0.7	chr19	12564502	12564797	(46052819)	C	AluSz	SINE/Alu	(18)	294	1	1824704
12	22.8	0.0	7.5	chr19	12647999	12648051	(45969565)	+	G-rich	Low_complexity	1	53	(0)	1824919
1098	21.1	8.5	7.1	chr19	13641894	13642204	(44975412)	+	MSTC	LTR/ERVL-MaLR	1	367	(61)	1827362
1966	16.1	0.6	2.8	chr19	13642205	13642521	(44975095)	C	AluSz6	SINE/Alu	(1)	311	2	1827363
237	31.7	2.1	0.9	chr19	13731949	13732059	(44885557)	+	MIRb	SINE/MIR	79	196	(72)	1827637
1412	15.6	6.1	0.4	chr19	14696197	14696460	(43921156)	C	L1MB7	LINE/L1	(22)	6162	5883	1830181
1383	23.3	9.9	3.6	chr19	14696470	14696731	(43920885)	C	MSTD	LTR/ERVL-MaLR	(11)	385	89	1830182
2111	11.9	0.0	0.0	chr19	14696732	14697036	(43920580)	C	AluSg	SINE/Alu	(0)	310	1	1830183
231	36.2	6.1	2.5	chr19	17333841	17334044	(41283572)	+	L2c	LINE/L2	2916	3127	(260)	1836047
659	26.1	10.0	1.0	chr19	17334054	17334254	(41283362)	C	MIR	SINE/MIR	(6)	256	36	1836048
12	20.5	2.0	5.9	chr19	17334383	17334432	(41283184)	+	(CCCCAG)n	Simple_repeat	1	51	(0)	1836049
2386	10.9	0.3	0.3	chr19	17894136	17894447	(40723169)	C	AluSx1	SINE/Alu	(0)	312	1	1837553
14	22.2	0.0	8.2	chr19	18281546	18281606	(40336010)	+	(CGCC)n	Simple_repeat	1	61	(0)	1838529
17	20.0	0.0	0.0	chr19	18429057	18429096	(40188520)	+	(GGCGCAG)n	Simple_repeat	1	40	(0)	1838879
15	13.7	0.0	0.0	chr19	18429232	18429255	(40188361)	+	(G)n	Simple_repeat	1	24	(0)	1838880
2455	6.1	0.3	0.0	chr19	18571037	18571330	(40046286)	+	AluSp	SINE/Alu	9	303	(10)	1839153
2639	4.8	0.0	0.6	chr19	18587303	18587615	(40030001)	+	AluY	SINE/Alu	1	311	(0)	1839175
1140	20.7	2.1	0.7	chr19	18587630	18587911	(40029705)	+	LTR12F	LTR/ERV1	234	519	(0)	1839176
1876	17.8	2.1	7.6	chr19	29424802	29425196	(29192420)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	2	1850219
2446	9.8	0.0	0.0	chr19	30704365	30704670	(27912946)	+	AluSq2	SINE/Alu	1	306	(7)	1852205
533	32.8	3.9	6.0	chr19	32057549	32057863	(26559753)	C	MamRep137	DNA/TcMar-Tigger	(0)	510	203	1854129
246	13.8	1.1	2.4	chr19	32058047	32058502	(26559114)	+	(CTTC)n	Simple_repeat	1	461	(0)	1854130
1984	19.4	2.5	1.3	chr19	32296636	32297026	(26320590)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1854550
345	21.1	8.2	0.6	chr19	34427987	34428112	(24189504)	C	L1ME3G	LINE/L1	(792)	132	1	1858625
1570	19.0	9.2	1.4	chr19	34681930	34682291	(23935325)	C	MSTD	LTR/ERVL-MaLR	(0)	396	4	1858997
278	34.8	5.6	0.0	chr19	34734412	34734546	(23883070)	+	MIR	SINE/MIR	50	192	(70)	1859056
1706	16.6	11.9	1.1	chr19	34738151	34738503	(23879113)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1859063
2454	9.3	0.0	0.0	chr19	35701851	35702162	(22915454)	C	AluSx1	SINE/Alu	(0)	312	1	1861016
25	21.7	2.3	4.5	chr19	35717916	35718005	(22899611)	+	(GCCCC)n	Simple_repeat	1	88	(0)	1861037
2253	11.3	0.0	0.3	chr19	36240587	36240886	(22376730)	+	AluSx	SINE/Alu	1	299	(13)	1862206
739	27.8	4.0	1.4	chr19	36240887	36241129	(22376487)	+	MSTD	LTR/ERVL-MaLR	102	383	(13)	1862205
1295	20.4	14.4	6.4	chr19	36241131	36241204	(22376412)	+	L1M4	LINE/L1	4843	4915	(1231)	1862199
2311	10.0	0.7	0.0	chr19	36241205	36241503	(22376113)	+	AluSq2	SINE/Alu	2	302	(11)	1862207
11383	1.6	0.0	2.0	chr19	36308415	36309981	(22307635)	+	SST1	Satellite/centr	1	1535	(28)	1862299
21	19.9	2.2	0.0	chr19	37906671	37906716	(20710900)	+	(CG)n	Simple_repeat	1	47	(0)	1865341
286	10.9	0.0	2.1	chr19	37934467	37934513	(20683103)	+	MIR	SINE/MIR	110	155	(107)	1865414
598	33.4	4.5	2.7	chr19	38004339	38004704	(20612912)	C	MLT1K	LTR/ERVL-MaLR	(19)	576	204	1865600
16	21.7	0.0	0.0	chr19	38316031	38316062	(20301554)	+	(C)n	Simple_repeat	1	32	(0)	1866378
967	18.1	3.4	7.0	chr19	38316237	38316451	(20301165)	+	AluJo	SINE/Alu	14	220	(92)	1866379
52	29.9	1.1	5.3	chr19	38849701	38849961	(19767655)	+	(CCG)n	Simple_repeat	1	264	(0)	1867573
12	18.7	0.0	3.0	chr19	39224751	39224783	(19392833)	+	A-rich	Low_complexity	1	33	(0)	1868587
1594	21.9	5.6	4.3	chr19	39852854	39853244	(18764372)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1869749
621	21.8	0.7	3.9	chr19	39853245	39853290	(18764326)	+	L1ME2z	LINE/L1	6375	6416	(28)	1869746
1985	7.5	0.0	0.0	chr19	39853301	39853541	(18764075)	+	AluSc8	SINE/Alu	1	241	(70)	1869750
2424	8.9	0.0	0.0	chr19	40405965	40406266	(18211350)	+	AluSq2	SINE/Alu	1	302	(11)	1870966
766	13.0	0.0	6.1	chr19	40406267	40406368	(18211248)	C	FLAM_C	SINE/Alu	(38)	105	10	1870965
455	24.0	15.6	2.0	chr19	40406378	40406526	(18211090)	C	MIRb	SINE/MIR	(64)	204	32	1870967
1923	12.2	1.0	7.5	chr19	40420500	40420698	(18196918)	+	AluJr	SINE/Alu	134	312	(0)	1871009
2599	5.8	0.0	0.0	chr19	41262758	41263068	(17354548)	+	AluSq	SINE/Alu	1	311	(2)	1873026
2016	12.9	1.3	1.0	chr19	41309553	41309854	(17307762)	+	AluJr4	SINE/Alu	2	304	(8)	1873119
2381	9.3	1.6	0.0	chr19	41417643	41417942	(17199674)	+	AluSp	SINE/Alu	1	305	(8)	1873397
1239	16.1	0.0	2.5	chr19	41417943	41418116	(17199500)	+	AluSz6	SINE/Alu	134	307	(5)	1873396
17646	13.6	8.5	6.9	chr19	42541153	42541316	(16076300)	C	L1M1	LINE/L1	(7383)	182	24	1875478
257	19.7	1.5	0.0	chr19	42541315	42541380	(16076236)	+	L1MB4	LINE/L1	6034	6100	(80)	1875472
550	16.3	0.3	0.3	chr19	42541381	42541508	(16076108)	C	FLAM_C	SINE/Alu	(164)	137	10	1875484
268	18.2	1.3	0.0	chr19	42541516	42541592	(16076024)	+	L1MB4	LINE/L1	6097	6174	(6)	1875472
7927	7.9	0.4	0.0	chr19	42776509	42777511	(15840105)	C	LTR13	LTR/ERVK	(0)	1007	1	1875773
7906	7.9	0.3	0.0	chr19	42922622	42923625	(15693991)	C	LTR13	LTR/ERVK	(0)	1007	1	1875977
8288	6.1	0.6	0.0	chr19	43087246	43088246	(15529370)	C	LTR13	LTR/ERVK	(0)	1007	1	1876215
336	33.1	4.2	2.2	chr19	43637361	43637538	(14980078)	C	MIR3	SINE/MIR	(23)	185	11	1877294
390	27.7	5.7	0.7	chr19	43951581	43951729	(14665887)	+	MIR	SINE/MIR	83	239	(23)	1877972
725	28.9	6.9	2.4	chr19	44140935	44141225	(14476391)	+	L2	LINE/L2	468	772	(2647)	1878265
194	31.7	9.6	0.8	chr19	44141949	44142072	(14475544)	+	MIR	SINE/MIR	104	239	(23)	1878266
2257	16.2	1.2	1.2	chr19	44164068	44164473	(14453143)	C	L1MB7	LINE/L1	(156)	6028	5623	1878307
1348	20.7	1.9	0.8	chr19	44164479	44164746	(14452870)	C	MLT1A0	LTR/ERVL-MaLR	(94)	271	1	1878309
1144	25.2	21.3	0.7	chr19	44444844	44445811	(14171805)	+	L2a	LINE/L2	2180	3411	(15)	1878746
214	25.3	2.4	5.7	chr19	44445931	44446018	(14171598)	C	L2a	LINE/L2	(39)	3387	3303	1878747
678	9.0	12.3	0.0	chr19	44845398	44845497	(13772119)	+	AluJr	SINE/Alu	1	114	(198)	1879786
22	33.3	0.0	1.2	chr19	44845597	44845676	(13771940)	+	GA-rich	Low_complexity	1	80	(0)	1879787
2127	12.7	0.0	1.0	chr19	44910658	44910986	(13706630)	C	AluSz	SINE/Alu	(0)	312	3	1879946
20	3.8	0.0	0.0	chr19	45509518	45509544	(13108072)	+	(CCA)n	Simple_repeat	1	27	(0)	1881496
12	12.6	0.0	3.6	chr19	45639451	45639478	(12978138)	+	(CCCGC)n	Simple_repeat	1	28	(0)	1881869
710	23.8	9.3	4.7	chr19	45639574	45639711	(12977905)	+	MIR	SINE/MIR	13	159	(103)	1881870
591	24.4	5.2	2.4	chr19	45927752	45927919	(12689697)	+	LTR67B	LTR/ERVL	2	174	(446)	1882602
246	28.9	4.0	2.0	chr19	45928008	45928106	(12689510)	+	LTR67B	LTR/ERVL	412	512	(108)	1882602
12	24.3	0.0	4.3	chr19	45928217	45928263	(12689353)	+	(GACAGG)n	Simple_repeat	1	47	(0)	1882603
953	20.0	4.1	2.3	chr19	46037671	46037885	(12579731)	C	MSTD	LTR/ERVL-MaLR	(0)	396	178	1882884
9335	1.6	0.1	0.1	chr19	46037892	46039772	(12577844)	C	L1PA2	LINE/L1	(0)	6155	4273	1882885
265	29.0	9.0	3.7	chr19	46076937	46077072	(12540544)	C	LTR78	LTR/ERV1	(498)	806	663	1882931
488	18.1	9.4	0.8	chr19	46886237	46886353	(11731263)	+	MER3	DNA/hAT-Charlie	47	174	(35)	1884831
1756	13.8	9.8	0.0	chr19	47955897	47956171	(10661445)	C	AluSx1	SINE/Alu	(7)	305	1	1887543
1062	18.2	0.0	4.2	chr19	47956179	47956370	(10661246)	C	AluJb	SINE/Alu	(22)	290	107	1887544
7404	9.5	1.1	0.6	chr19	48259616	48260614	(10357002)	C	LTR13	LTR/ERVK	(0)	1007	4	1888303
11	34.0	4.2	2.0	chr19	48325359	48325454	(10292162)	+	GA-rich	Low_complexity	1	100	(0)	1888477
2291	9.7	0.3	0.3	chr19	48572234	48572533	(10045083)	+	AluSc8	SINE/Alu	2	301	(10)	1889107
2283	11.4	0.3	0.0	chr19	48572876	48573174	(10044442)	+	AluSx1	SINE/Alu	2	301	(11)	1889108
2415	10.5	0.0	0.0	chr19	49143360	49143672	(9473944)	C	AluSq2	SINE/Alu	(0)	313	1	1890466
580	28.2	7.0	0.0	chr19	49158684	49158857	(9458759)	+	MIR	SINE/MIR	44	230	(32)	1890488
2368	5.0	0.4	0.0	chr19	49159025	49159329	(9458287)	C	AluY	SINE/Alu	(0)	311	1	1890489
2221	12.0	0.0	0.3	chr19	49452714	49453021	(9164595)	C	AluSx	SINE/Alu	(5)	307	1	1891124
2460	9.3	0.0	0.0	chr19	49493401	49493712	(9123904)	+	AluSx1	SINE/Alu	1	312	(0)	1891213
416	20.5	7.3	1.0	chr19	49493722	49493834	(9123782)	+	FLAM_C	SINE/Alu	5	124	(178)	1891214
2521	5.4	0.0	0.0	chr19	49493835	49494131	(9123485)	C	AluY	SINE/Alu	(14)	297	1	1891215
1885	14.3	2.4	0.9	chr19	50135965	50136288	(8481328)	+	L1PB1	LINE/L1	5822	6150	(1)	1892741
4267	15.9	0.8	4.1	chr19	50136289	50136658	(8480958)	C	L1P4	LINE/L1	(2928)	3218	2854	1892740
1120	9.2	0.0	13.3	chr19	50136668	50136863	(8480753)	+	AluSx	SINE/Alu	137	306	(6)	1892742
323	25.0	10.1	2.4	chr19	50136865	50137073	(8480543)	C	L1MC4	LINE/L1	(5098)	1117	891	1892743
2051	15.0	2.5	5.8	chr19	52896742	52897158	(5720458)	+	MER51C	LTR/ERV1	124	526	(114)	1898428
2124	14.9	0.3	0.0	chr19	54086478	54086786	(4530830)	+	AluSx	SINE/Alu	2	311	(1)	1901033
2195	14.7	7.1	0.3	chr19	54086787	54086891	(4530725)	+	MSTC	LTR/ERVL-MaLR	33	164	(264)	1901031
28	2.5	4.7	2.2	chr19	54086892	54086934	(4530682)	+	(ATGGATTA)n	Simple_repeat	1	45	(0)	1901034
2195	14.7	7.1	0.3	chr19	54086935	54087197	(4530419)	+	MSTC	LTR/ERVL-MaLR	165	427	(1)	1901031
238	25.5	1.0	0.5	chr19	54096199	54096810	(4520806)	+	(CTCT)n	Simple_repeat	1	618	(0)	1901067
198	31.6	8.7	0.0	chr19	55504085	55504179	(3113437)	C	MIRb	SINE/MIR	(95)	173	70	1903859
12	32.4	0.0	4.3	chr19	55641170	55641239	(2976377)	+	(GGCCGG)n	Simple_repeat	1	70	(0)	1904219
232	30.1	5.2	0.4	chr19	55670357	55670454	(2947162)	C	L2a	LINE/L2	(18)	3408	3251	1904263
633	24.4	5.6	2.4	chr19	56403620	56403825	(2213791)	+	L2a	LINE/L2	3212	3424	(2)	1905744
16	10.8	0.0	3.1	chr19	56403838	56403869	(2213747)	+	(GAGAAA)n	Simple_repeat	1	32	(0)	1905745
16	20.7	3.9	1.9	chr19	56404356	56404407	(2213209)	+	(CGGCCC)n	Simple_repeat	1	54	(0)	1905746
82	15.3	1.6	4.2	chr19	56538768	56538955	(2078661)	+	G-rich	Low_complexity	1	191	(0)	1905962
820	24.6	2.1	5.8	chr19	57069364	57069556	(1548060)	+	MER33	DNA/hAT-Charlie	28	220	(104)	1907102
2303	8.1	0.0	0.7	chr19	57069557	57069852	(1547764)	C	AluSz	SINE/Alu	(18)	294	1	1907103
194	34.8	6.1	0.0	chr19	58003132	58003223	(614393)	C	MIR	SINE/MIR	(45)	217	120	1908686
790	18.2	13.3	4.2	chr19	58283327	58283598	(334018)	+	MSTC	LTR/ERVL-MaLR	6	362	(66)	1909260
2553	6.7	0.0	0.0	chr19	58283600	58283898	(333718)	C	AluY	SINE/Alu	(12)	299	1	1909261
6455	13.9	14.4	5.6	chr2	10601	12198	(242181331)	C	TAR1	Satellite/telo	(218)	1893	132	1910812
931	23.1	21.5	1.3	chr2	688019	688333	(241505196)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1911479
847	20.5	16.2	7.1	chr2	780614	780981	(241412548)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	1911574
3292	29.8	7.9	5.1	chr2	2443232	2443506	(239750023)	+	ERV3-16A3_I-int	LTR/ERVL	2122	2416	(2810)	1913244
1164	19.8	19.4	2.1	chr2	2443507	2443832	(239749697)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1913247
2642	30.4	7.3	4.9	chr2	2443833	2444460	(239749069)	+	ERV3-16A3_I-int	LTR/ERVL	2417	3083	(2143)	1913244
1589	16.2	6.1	3.6	chr2	6857290	6857617	(235335912)	C	AluJo	SINE/Alu	(0)	312	1	1919120
12	22.2	0.0	7.4	chr2	8685541	8685594	(233507935)	+	(CCCCGG)n	Simple_repeat	1	54	(0)	1921733
374	26.7	5.9	4.3	chr2	9324147	9324330	(232869199)	C	Tigger19a	DNA/TcMar-Tigger	(50)	273	87	1922766
946	15.4	11.9	3.9	chr2	9324342	9324374	(232869155)	C	L1M4b	LINE/L1	(3786)	3220	3193	1922767
1567	16.1	13.1	2.6	chr2	9324375	9324756	(232868773)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	1922768
2439	14.9	2.9	0.0	chr2	10261226	10261634	(231931895)	C	MSTC	LTR/ERVL-MaLR	(0)	428	8	1924474
958	26.3	12.6	1.2	chr2	10332570	10332969	(231860560)	C	MER31B	LTR/ERV1	(5)	461	10	1924590
306	32.2	11.2	0.6	chr2	10413072	10413246	(231780283)	C	Charlie15a	DNA/hAT-Charlie	(16)	208	13	1924726
203	13.9	2.7	0.0	chr2	11471114	11471149	(230722380)	C	MIR3	SINE/MIR	(50)	158	122	1926703
571	14.1	3.2	0.2	chr2	11471277	11471383	(230722146)	C	MSTD	LTR/ERVL-MaLR	(54)	413	231	1926704
712	15.1	0.0	0.0	chr2	11471377	11471482	(230722047)	C	MSTD	LTR/ERVL-MaLR	(290)	106	1	1926704
1102	22.9	11.9	6.2	chr2	11913068	11913439	(230280090)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1927458
1966	20.2	3.8	2.6	chr2	14726289	14726679	(227466850)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	1931635
1474	26.9	5.8	6.0	chr2	15438405	15439013	(226754516)	+	L1MEf	LINE/L1	11	617	(5783)	1932713
13	16.9	0.0	8.5	chr2	17538994	17539040	(224654489)	+	(CCGCGCT)n	Simple_repeat	1	47	(0)	1936102
13	19.9	6.5	0.0	chr2	20447376	20447421	(221746108)	+	(GCGAGCG)n	Simple_repeat	1	49	(0)	1940394
1728	20.5	9.3	0.0	chr2	20682442	20682792	(221510737)	C	MSTD	LTR/ERVL-MaLR	(0)	396	10	1940729
577	6.8	0.0	8.2	chr2	24151593	24151689	(218041840)	+	MER30	DNA/hAT-Charlie	91	179	(51)	1945592
1190	13.0	0.0	0.6	chr2	24151690	24151858	(218041671)	C	AluSx	SINE/Alu	(19)	293	126	1945593
2346	10.7	0.0	0.0	chr2	24151859	24152166	(218041363)	C	AluSx	SINE/Alu	(2)	310	3	1945594
2289	10.2	0.3	0.0	chr2	24340200	24340494	(217853035)	+	AluSx	SINE/Alu	1	296	(16)	1945895
663	25.2	8.3	1.0	chr2	24340495	24340709	(217852820)	C	L1ME3A	LINE/L1	(80)	6099	5857	1945894
17	0.0	0.0	0.0	chr2	24340752	24340770	(217852759)	+	(AC)n	Simple_repeat	1	19	(0)	1945896
531	31.1	7.2	2.6	chr2	24411379	24411642	(217781887)	+	MLT1K	LTR/ERVL-MaLR	266	542	(53)	1946069
1110	16.6	1.1	0.0	chr2	24411648	24411822	(217781707)	+	MSTD	LTR/ERVL-MaLR	219	395	(1)	1946070
373	27.4	2.9	0.0	chr2	31083083	31083184	(211110345)	C	MER81	DNA/hAT-Blackjack	(0)	114	10	1957947
1475	15.5	5.5	21.1	chr2	32896586	32897059	(209296470)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1961150
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
2457	7.2	0.0	0.0	chr2	32940874	32941164	(209252365)	C	AluSg	SINE/Alu	(19)	291	1	1961232
22	14.3	2.1	2.0	chr2	36966336	36966383	(205227146)	+	(GCC)n	Simple_repeat	1	49	(0)	1966852
13	24.4	0.0	4.3	chr2	38376977	38377023	(203816506)	+	G-rich	Low_complexity	1	47	(0)	1969097
1268	20.6	13.1	2.0	chr2	38619051	38619401	(203574128)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1969568
27	19.5	3.1	5.9	chr2	39437114	39437211	(202756318)	+	(CGC)n	Simple_repeat	1	101	(0)	1971190
1984	18.1	1.5	5.8	chr2	39484112	39484521	(202709008)	+	MSTD	LTR/ERVL-MaLR	3	394	(2)	1971294
2066	16.0	0.8	3.7	chr2	39531449	39531669	(202661860)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	155	1971384
2415	8.5	0.0	0.7	chr2	39531670	39531974	(202661555)	C	AluSc	SINE/Alu	(6)	303	1	1971385
1475	21.2	5.8	6.8	chr2	40465744	40466143	(201727386)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1972624
950	27.4	4.2	12.7	chr2	41753719	41754050	(200439479)	+	LTR16A1	LTR/ERVL	4	289	(167)	1974378
35	0.0	0.0	0.0	chr2	41754051	41754080	(200439449)	+	(AC)n	Simple_repeat	1	30	(0)	1974379
950	27.4	4.2	12.7	chr2	41754081	41754244	(200439285)	+	LTR16A1	LTR/ERVL	290	456	(0)	1974378
2389	11.5	0.0	0.0	chr2	43040850	43041161	(199152368)	C	AluSz	SINE/Alu	(0)	312	1	1976760
1533	29.5	6.8	7.1	chr2	45325919	45326758	(196866771)	C	MLT1D-int	LTR/ERVL-MaLR	(433)	954	118	1980553
19	24.9	1.4	2.8	chr2	46699184	46699253	(195494276)	+	G-rich	Low_complexity	1	71	(0)	1982668
2176	9.4	2.0	0.3	chr2	47784462	47784760	(194408769)	C	AluSp	SINE/Alu	(9)	304	1	1984800
1729	16.5	15.2	0.3	chr2	48254631	48254994	(193938535)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	1985649
1733	16.5	8.3	7.9	chr2	53176741	53177134	(189016395)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	1992237
1376	19.6	11.9	1.7	chr2	54893236	54893588	(187299941)	C	MSTD	LTR/ERVL-MaLR	(2)	394	1	1994991
1881	15.2	2.0	0.0	chr2	55281739	55282027	(186911502)	+	AluSx1	SINE/Alu	1	295	(17)	1995634
25	20.8	3.1	1.5	chr2	57759889	57759952	(184433577)	+	GA-rich	Low_complexity	1	66	(0)	1998955
22	15.8	0.0	0.0	chr2	57760318	57760353	(184433176)	+	(T)n	Simple_repeat	1	36	(0)	1998956
1279	21.1	11.6	1.7	chr2	58684467	58684822	(183508707)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2000141
1185	25.4	5.6	3.0	chr2	59449549	59449877	(182743652)	+	MLT1A0	LTR/ERVL-MaLR	28	365	(0)	2001135
1069	14.5	1.7	2.8	chr2	61138742	61138918	(181054611)	C	MSTD	LTR/ERVL-MaLR	(0)	396	222	2003743
87	15.4	1.0	5.0	chr2	61138945	61139142	(181054387)	+	(TTCC)n	Simple_repeat	1	200	(0)	2003744
1663	18.2	0.7	6.7	chr2	61139146	61139474	(181054055)	C	AluJb	SINE/Alu	(3)	309	1	2003745
37	0.0	0.0	0.0	chr2	61537753	61537784	(180655745)	+	(AC)n	Simple_repeat	1	32	(0)	2004522
17	25.1	0.0	0.0	chr2	61538196	61538242	(180655287)	+	(GCTGCC)n	Simple_repeat	1	47	(0)	2004523
2300	9.3	0.3	0.0	chr2	61808882	61809172	(180384357)	C	AluSx1	SINE/Alu	(20)	292	1	2005242
991	24.7	7.0	1.2	chr2	61809181	61809516	(180384013)	+	L2a	LINE/L2	2098	2454	(965)	2005243
2088	16.4	6.1	2.4	chr2	63761047	63761427	(178432102)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2008285
3020	6.9	2.5	0.3	chr2	63761478	63761868	(178431661)	C	MLT2A1	LTR/ERVL	(44)	400	1	2008286
22	3.6	0.0	0.0	chr2	64750746	64750774	(177442755)	+	(GAG)n	Simple_repeat	1	29	(0)	2009875
18	6.3	2.7	5.3	chr2	64750840	64750876	(177442653)	+	(GGC)n	Simple_repeat	1	38	(0)	2009876
18	11.9	3.9	5.7	chr2	64751033	64751083	(177442446)	+	(GGAGC)n	Simple_repeat	1	53	(0)	2009877
1660	15.9	15.4	0.6	chr2	64810504	64810850	(177382679)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	2009978
588	28.9	11.5	2.8	chr2	64917502	64917715	(177275814)	+	MIRb	SINE/MIR	28	268	(0)	2010187
23	19.1	0.0	0.0	chr2	65129922	65129969	(177063560)	+	(GCC)n	Simple_repeat	1	48	(0)	2010632
19	11.0	0.0	11.3	chr2	65130313	65130374	(177063155)	+	(CCCTC)n	Simple_repeat	1	62	(0)	2010633
2644	4.0	0.0	0.0	chr2	65640116	65640414	(176553115)	C	AluSc	SINE/Alu	(10)	299	1	2011683
1493	25.1	4.3	1.3	chr2	66120868	66121251	(176072278)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2012403
14	17.6	0.0	0.0	chr2	67631637	67631668	(174561861)	+	(TTGTT)n	Simple_repeat	1	32	(0)	2014346
2192	16.7	1.8	3.0	chr2	67901285	67901685	(174291844)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2014724
633	31.0	14.1	1.6	chr2	67901686	67901786	(174291743)	C	MLT1H	LTR/ERVL-MaLR	(417)	132	9	2014723
690	16.6	12.9	0.6	chr2	68444807	68444976	(173748553)	C	MER58B	DNA/hAT-Charlie	(144)	197	4	2015626
1422	13.2	8.4	0.0	chr2	70100473	70100691	(172092838)	C	AluSx1	SINE/Alu	(0)	312	74	2018376
2287	9.2	0.0	1.6	chr2	70100707	70101011	(172092518)	+	AluSx1	SINE/Alu	1	300	(12)	2018377
481	32.7	1.8	2.9	chr2	70141286	70141455	(172052074)	+	MIRb	SINE/MIR	78	245	(23)	2018485
880	12.4	0.8	0.0	chr2	70191335	70191463	(172002066)	+	FLAM_C	SINE/Alu	2	131	(2)	2018610
790	13.9	1.4	9.9	chr2	70257127	70257278	(171936251)	C	MER34B	LTR/ERV1	(446)	141	3	2018740
2703	3.6	0.0	0.0	chr2	70257601	70257904	(171935625)	C	AluYm1	SINE/Alu	(7)	304	1	2018745
25	7.2	4.5	0.0	chr2	70766944	70766987	(171426542)	+	(TTTTCTA)n	Simple_repeat	1	46	(0)	2019579
12	11.6	3.3	3.2	chr2	70767200	70767229	(171426300)	+	G-rich	Low_complexity	1	31	(0)	2019580
12	17.6	3.1	0.0	chr2	70767439	70767470	(171426059)	+	(CGCCC)n	Simple_repeat	1	33	(0)	2019581
7772	6.7	0.0	6.2	chr2	70976795	70977868	(171215661)	C	LTR13	LTR/ERVK	(0)	1007	1	2019924
202	26.5	17.8	0.0	chr2	71897718	71897800	(170295729)	+	L2c	LINE/L2	3112	3212	(175)	2021297
220	33.1	16.1	1.5	chr2	74391227	74391358	(167802171)	+	L3b	LINE/CR1	5054	5208	(24)	2025304
307	26.0	8.5	6.8	chr2	74454267	74454427	(167739102)	C	L1ME4b	LINE/L1	(0)	892	729	2025430
225	21.6	21.3	0.0	chr2	74454430	74454503	(167739026)	C	L1M4	LINE/L1	(347)	5827	5734	2025431
249	28.7	2.2	2.2	chr2	74454537	74454625	(167738904)	C	L1ME4b	LINE/L1	(319)	573	481	2025430
354	28.0	4.7	10.1	chr2	74454680	74454836	(167738693)	+	L2c	LINE/L2	3208	3385	(2)	2025425
1347	15.2	5.5	3.2	chr2	75032620	75032719	(167160810)	+	MER33	DNA/hAT-Charlie	1	97	(227)	2026375
1933	18.9	8.4	0.0	chr2	75032720	75033079	(167160450)	+	MSTD	LTR/ERVL-MaLR	4	396	(0)	2026376
1347	15.2	5.5	3.2	chr2	75033080	75033263	(167160266)	+	MER33	DNA/hAT-Charlie	98	292	(32)	2026375
1586	22.6	6.3	0.8	chr2	75297681	75298054	(166895475)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2026758
1137	19.3	10.0	2.7	chr2	79721183	79721540	(162471989)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	2032670
289	18.5	23.4	7.4	chr2	85913963	85914125	(156279404)	C	LTR88b	LTR/Gypsy?	(0)	837	641	2041731
1159	26.1	12.4	4.5	chr2	85914168	85914194	(156279335)	+	LTR33	LTR/ERVL	1	27	(488)	2041732
2300	16.8	0.8	3.9	chr2	85914195	85914603	(156278926)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2041733
18	16.2	0.0	11.5	chr2	86441524	86441601	(155751928)	+	(GGCCGG)n	Simple_repeat	1	78	(0)	2042677
18	10.8	0.0	0.0	chr2	88055731	88055760	(154137769)	+	(CCG)n	Simple_repeat	1	30	(0)	2045205
283	26.5	6.4	1.7	chr2	88492351	88492469	(153701060)	C	MIRb	SINE/MIR	(85)	183	59	2046134
917	27.0	5.5	2.5	chr2	89215325	89215800	(152977729)	+	L1MC4	LINE/L1	6729	7018	(1024)	2047125
1656	19.8	7.1	2.9	chr2	89215807	89216185	(152977344)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2047126
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
21	8.8	2.8	0.0	chr2	91478098	91478133	(150715396)	+	(CCG)n	Simple_repeat	1	37	(0)	2048369
1456	19.3	7.1	11.1	chr2	95358538	95358851	(146834678)	C	MSTD	LTR/ERVL-MaLR	(0)	396	82	2050570
672	23.1	0.8	0.0	chr2	95358852	95358981	(146834548)	+	FLAM_A	SINE/Alu	1	131	(11)	2050571
2215	10.5	0.7	0.0	chr2	95684172	95684465	(146509064)	C	AluY	SINE/Alu	(15)	296	1	2051052
1837	18.6	5.0	2.1	chr2	95684494	95684877	(146508652)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2051053
4272	11.6	4.9	1.5	chr2	96209232	96209895	(145983634)	+	LTR8	LTR/ERV1	4	691	(0)	2051757
15	8.2	4.3	4.3	chr2	96335904	96335939	(145857590)	+	G-rich	Low_complexity	1	36	(0)	2051964
14	20.0	2.4	2.3	chr2	96335988	96336029	(145857500)	+	G-rich	Low_complexity	1	43	(0)	2051964
2315	11.0	0.0	0.0	chr2	97685564	97685862	(144507667)	C	AluSx1	SINE/Alu	(13)	299	1	2053987
1245	18.2	1.0	8.4	chr2	97685863	97685967	(144507562)	+	L1MB4	LINE/L1	5959	6065	(613)	2053973
1728	21.5	0.8	7.7	chr2	97685972	97686389	(144507140)	C	MSTD	LTR/ERVL-MaLR	(7)	389	1	2053988
2399	8.5	0.0	0.0	chr2	97703347	97703641	(144489888)	C	AluSx	SINE/Alu	(17)	295	1	2054018
11	27.2	2.0	2.0	chr2	97995932	97995981	(144197548)	+	G-rich	Low_complexity	1	51	(0)	2054374
2041	17.7	5.0	1.6	chr2	98540508	98540874	(143652655)	C	MSTD	LTR/ERVL-MaLR	(0)	396	17	2055149
97	22.3	1.8	0.0	chr2	100985114	100985342	(141208187)	+	(CATC)n	Simple_repeat	1	233	(0)	2058809
1837	16.8	9.6	0.3	chr2	102974011	102974369	(139219160)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2061774
6476	14.4	5.1	2.2	chr2	105034095	105035134	(137158395)	C	Tigger3b	DNA/TcMar-Tigger	(26)	1205	130	2064307
3200	10.9	0.9	0.4	chr2	105035135	105035595	(137157934)	C	LTR2	LTR/ERV1	(0)	463	1	2064308
61	22.5	2.4	1.8	chr2	105237906	105238070	(136955459)	+	GA-rich	Low_complexity	1	169	(0)	2064618
29	8.2	0.0	0.0	chr2	106582484	106582522	(135611007)	+	(A)n	Simple_repeat	1	39	(0)	2066716
8253	5.7	0.5	0.2	chr2	112049135	112050138	(130143391)	+	LTR13	LTR/ERVK	1	1007	(0)	2074470
1765	17.4	11.4	1.4	chr2	112533476	112533831	(129659698)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2075256
2092	17.5	5.6	1.9	chr2	112889529	112889907	(129303622)	C	MSTD	LTR/ERVL-MaLR	(2)	394	1	2075900
22	16.9	6.4	3.6	chr2	113157294	113157308	(129036221)	+	(CCCG)n	Simple_repeat	1	42	(41)	2076329
15	17.3	2.0	5.8	chr2	113157309	113157359	(129036170)	+	(CCCGG)n	Simple_repeat	1	52	(0)	2076330
22	16.9	6.4	3.6	chr2	113157360	113157371	(129036158)	+	(CCCG)n	Simple_repeat	43	83	(0)	2076329
2479	8.2	0.0	0.0	chr2	113326691	113326994	(128866535)	C	AluY	SINE/Alu	(7)	304	1	2076621
1763	18.6	6.1	2.6	chr2	113327023	113327404	(128866125)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2076622
1348	19.6	2.7	2.0	chr2	113583264	113583560	(128609969)	C	L1MB3	LINE/L1	(2)	6181	5883	2077015
13	15.4	2.5	4.9	chr2	113583676	113583715	(128609814)	+	G-rich	Low_complexity	1	41	(0)	2077016
3111	12.1	0.9	1.4	chr2	113601977	113602680	(128590849)	+	TAR1	Satellite/telo	1	700	(1434)	2077035
14	14.2	3.2	0.0	chr2	119240736	119240766	(122952763)	+	(AGGC)n	Simple_repeat	1	32	(0)	2084973
20	27.2	1.6	1.6	chr2	119241030	119241090	(122952439)	+	(AC)n	Simple_repeat	1	62	(0)	2084974
1577	17.0	12.1	1.9	chr2	120838651	120838962	(121354567)	+	Tigger3a	DNA/TcMar-Tigger	1	348	(0)	2087639
909	13.3	2.6	2.0	chr2	120838963	120839045	(121354484)	C	MSTD	LTR/ERVL-MaLR	(69)	327	243	2087638
1149	18.5	1.7	1.7	chr2	121326094	121326296	(120867233)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	188	2088527
977	18.3	21.3	4.4	chr2	121326297	121326495	(120867034)	C	MLT1B	LTR/ERVL-MaLR	(0)	408	152	2088527
1933	15.9	2.0	1.0	chr2	121326496	121326797	(120866732)	C	AluJr	SINE/Alu	(7)	305	1	2088528
230	20.9	0.0	0.0	chr2	126657383	126657433	(115536096)	+	MIRc	SINE/MIR	109	157	(51)	2096195
23	22.1	2.9	1.4	chr2	127107093	127107162	(115086367)	+	(GAGC)n	Simple_repeat	1	72	(0)	2096882
1786	15.8	8.6	3.7	chr2	127392856	127393231	(114800298)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2097367
19	6.5	3.1	0.0	chr2	127886610	127886641	(114306888)	+	(CCTCG)n	Simple_repeat	1	33	(0)	2098185
7690	14.6	5.2	6.5	chr2	128245664	128246375	(113947154)	+	L1MC1	LINE/L1	2449	3131	(3190)	2098949
2331	16.8	0.5	1.5	chr2	128246376	128246775	(113946754)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2098957
2702	21.7	2.4	1.7	chr2	129406804	129407503	(112786026)	C	L1M4	LINE/L1	(3142)	3502	2798	2100406
1390	18.4	15.0	1.6	chr2	129407506	129407871	(112785658)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	2100409
13	18.4	2.6	0.0	chr2	133999574	133999607	(108193922)	+	(ATATCT)n	Simple_repeat	1	35	(0)	2106776
1675	22.0	4.1	2.6	chr2	133999608	133999994	(108193535)	C	MSTD	LTR/ERVL-MaLR	(0)	396	4	2106777
1429	18.3	3.0	11.1	chr2	134692458	134692862	(107500667)	C	MLT1A	LTR/ERVL-MaLR	(3)	371	1	2107768
626	26.6	2.7	5.3	chr2	135064891	135065152	(107128377)	C	L1ME2z	LINE/L1	(5488)	648	394	2108389
246	29.5	0.0	0.0	chr2	135065262	135065322	(107128207)	+	Charlie1	DNA/hAT-Charlie	1	61	(2720)	2108398
1076	20.5	12.2	4.4	chr2	135065333	135065628	(107127901)	+	Charlie1a	DNA/hAT-Charlie	1038	1351	(104)	2108399
15	18.3	0.0	2.6	chr2	135531567	135531621	(106661908)	+	(CCCGC)n	Simple_repeat	1	53	(0)	2109150
17	15.5	4.7	0.0	chr2	135531859	135531901	(106661628)	+	(GGCTGC)n	Simple_repeat	1	45	(0)	2109151
2833	18.0	4.9	1.8	chr2	135951512	135951958	(106241571)	+	Tigger9b	DNA/TcMar-Tigger	5	473	(151)	2109907
2295	8.7	0.0	1.1	chr2	135951959	135952245	(106241284)	+	AluSq	SINE/Alu	1	284	(29)	2109908
1451	20.3	6.9	9.7	chr2	136057699	136058102	(106135427)	C	MSTD	LTR/ERVL-MaLR	(4)	392	1	2110102
51	6.9	0.0	0.0	chr2	138420185	138420246	(103773283)	+	(CA)n	Simple_repeat	1	62	(0)	2113401
443	33.3	12.6	1.1	chr2	138420247	138420451	(103773078)	+	Zaphod	DNA/hAT-Tip100	87	324	(3707)	2113400
720	16.4	11.7	6.9	chr2	138420457	138420740	(103772789)	+	MSTD	LTR/ERVL-MaLR	1	367	(29)	2113402
797	22.2	1.2	5.5	chr2	138420709	138420961	(103772568)	+	Zaphod	DNA/hAT-Tip100	3790	4031	(0)	2113403
17	0.0	3.2	6.2	chr2	138501746	138501781	(103691748)	+	(GCC)n	Simple_repeat	1	34	(0)	2113519
15	21.8	4.8	3.1	chr2	138501781	138501842	(103691687)	+	(CGGAGC)n	Simple_repeat	1	65	(0)	2113520
18	25.0	3.2	1.5	chr2	138501836	138501898	(103691631)	+	(GCG)n	Simple_repeat	1	65	(0)	2113521
1525	21.2	7.3	2.1	chr2	139709003	139709377	(102484152)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2115173
975	23.7	17.2	2.0	chr2	140116311	140116655	(102076874)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	2115738
3225	16.1	4.4	0.2	chr2	140868880	140869422	(101324107)	+	LTR27D	LTR/ERV1	1	567	(48)	2116703
1798	19.1	7.6	1.9	chr2	142107204	142107576	(100085953)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2118346
2232	10.8	0.0	5.5	chr2	142107619	142107943	(100085586)	C	AluSx1	SINE/Alu	(3)	309	3	2118347
957	25.5	10.8	4.5	chr2	145719410	145719746	(96473783)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	5	2123035
1774	19.2	6.6	3.3	chr2	148854958	148855351	(93338178)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	2127256
292	17.0	18.0	1.0	chr2	148855394	148855494	(93338035)	+	LTR16A1	LTR/ERVL	335	456	(0)	2127255
40	0.0	0.0	0.0	chr2	149038942	149038978	(93154551)	+	(CGCGGGGC)n	Simple_repeat	1	37	(0)	2127513
650	33.7	4.2	8.7	chr2	149490504	149490825	(92702704)	C	L2c	LINE/L2	(8)	3367	3061	2128142
1597	16.5	15.7	2.1	chr2	150291688	150292027	(91901502)	C	MSTD	LTR/ERVL-MaLR	(0)	396	2	2129160
1488	17.4	12.2	3.9	chr2	150292118	150292447	(91901082)	+	MER57E1	LTR/ERV1	12	372	(0)	2129161
773	26.2	16.4	5.0	chr2	151325583	151325799	(90867730)	+	L1ME2	LINE/L1	5753	6001	(163)	2130674
1244	18.6	22.7	5.0	chr2	151325800	151326065	(90867464)	C	MSTD	LTR/ERVL-MaLR	(0)	396	55	2130677
2195	14.6	0.0	0.0	chr2	151326066	151326359	(90867170)	C	AluSx3	SINE/Alu	(17)	294	1	2130678
13	14.3	2.3	6.7	chr2	152335727	152335770	(89857759)	+	G-rich	Low_complexity	1	45	(0)	2132280
9381	12.6	4.0	5.8	chr2	154274750	154276211	(87917318)	+	THE1C-int	LTR/ERVL-MaLR	1	1473	(107)	2134755
1179	22.7	10.4	5.1	chr2	154677021	154677392	(87516137)	+	MSTD	LTR/ERVL-MaLR	1	394	(2)	2135276
335	31.9	6.8	0.0	chr2	157653527	157653664	(84539865)	+	MIR	SINE/MIR	75	222	(40)	2139008
1258	20.8	16.4	0.9	chr2	157653681	157654024	(84539505)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	2139009
1477	19.4	0.7	2.5	chr2	158758804	158759081	(83434448)	C	AluJb	SINE/Alu	(39)	273	1	2140520
870	19.2	11.8	2.2	chr2	158759082	158759399	(83434130)	+	MSTD	LTR/ERVL-MaLR	38	396	(0)	2140519
2127	13.0	2.2	0.7	chr2	158944538	158944844	(83248685)	+	AluSz6	SINE/Alu	1	312	(0)	2140860
1873	17.2	5.7	2.8	chr2	158944845	158945130	(83248399)	C	MSTD	LTR/ERVL-MaLR	(70)	326	28	2140859
560	25.4	14.0	1.0	chr2	159918467	159918665	(82274864)	C	MIRb	SINE/MIR	(14)	254	26	2142352
292	32.1	13.0	6.7	chr2	159918846	159919456	(82274073)	C	L2c	LINE/L2	(1611)	1808	1154	2142348
16417	12.2	8.3	5.1	chr2	160066500	160069590	(82123939)	C	MER4-int	LTR/ERV1	(30)	6568	2474	2142584
385	29.6	4.8	3.0	chr2	160356504	160356604	(81836925)	+	MIR	SINE/MIR	3	105	(163)	2142958
956	14.9	0.6	0.0	chr2	160356640	160356800	(81836729)	+	MSTD	LTR/ERVL-MaLR	235	396	(0)	2142959
67	0.0	0.0	0.0	chr2	161278891	161278950	(80914579)	+	(TCCT)n	Simple_repeat	1	60	(0)	2144204
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
619	18.6	0.5	0.0	chr2	161281902	161282139	(80911390)	+	ACRO1	Satellite/acro	1	239	(5)	2144211
1048	28.9	4.1	7.9	chr2	162254536	162254970	(79938559)	C	LTR16	LTR/ERVL	(0)	438	24	2145461
1573	18.3	14.2	0.8	chr2	162254971	162255323	(79938206)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	2145462
26	0.0	0.0	0.0	chr2	165761564	165761588	(76431941)	+	(AAAC)n	Simple_repeat	1	25	(0)	2150087
1030	23.6	12.1	8.4	chr2	167223926	167224247	(74969282)	C	MSTD	LTR/ERVL-MaLR	(0)	396	55	2151956
1786	15.5	0.3	4.4	chr2	167224248	167224543	(74968986)	C	AluJb	SINE/Alu	(26)	286	3	2151957
979	23.9	2.2	6.3	chr2	168686047	168686381	(73507148)	C	MLT1B	LTR/ERVL-MaLR	(4)	386	66	2153914
3043	18.1	6.4	1.5	chr2	169691637	169692247	(72501282)	C	L1MB7	LINE/L1	(6362)	1155	513	2155415
1458	18.0	7.2	9.5	chr2	169692248	169692444	(72501085)	C	MSTD	LTR/ERVL-MaLR	(7)	389	217	2155423
46	0.0	2.3	0.0	chr2	169692445	169692487	(72501042)	+	(CA)n	Simple_repeat	1	44	(0)	2155424
1458	18.0	7.2	9.5	chr2	169692488	169692657	(72500872)	C	MSTD	LTR/ERVL-MaLR	(180)	216	31	2155423
1741	19.2	15.4	0.0	chr2	170234222	170234555	(71958974)	C	MSTD	LTR/ERVL-MaLR	(1)	395	1	2156332
501	17.5	1.6	17.2	chr2	170234556	170234611	(71958918)	C	MLT1D	LTR/ERVL-MaLR	(68)	437	382	2156330
1531	25.5	11.0	1.9	chr2	170234617	170235087	(71958442)	+	L2	LINE/L2	2410	2928	(491)	2156333
2670	17.9	8.1	4.4	chr2	171778248	171778600	(70414929)	+	L1M4a2	LINE/L1	2243	2608	(634)	2159012
2121	16.6	5.6	0.3	chr2	171778601	171778975	(70414554)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2159015
2670	17.9	8.1	4.4	chr2	171778976	171779432	(70414097)	+	L1M4a2	LINE/L1	2609	3085	(157)	2159012
17	15.9	8.6	1.6	chr2	171894270	171894327	(70299202)	+	(GCGCGCC)n	Simple_repeat	1	63	(0)	2159210
14	20.2	4.3	2.0	chr2	173354872	173354918	(68838611)	+	(GCT)n	Simple_repeat	1	49	(0)	2161545
1690	19.9	9.4	4.7	chr2	174758695	174759138	(67434391)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	2163801
1392	25.1	7.3	0.5	chr2	176272917	176273285	(65920244)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2165881
4747	14.2	1.2	9.2	chr2	176867428	176867658	(65325871)	C	L1MA8	LINE/L1	(139)	6152	5929	2166727
2333	16.0	2.0	0.0	chr2	176867659	176868046	(65325483)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2166728
4747	14.2	1.2	9.2	chr2	176868047	176868560	(65324969)	C	L1MA8	LINE/L1	(363)	5928	5442	2166727
2265	15.7	3.0	1.0	chr2	177107235	177107620	(65085909)	+	MSTD	LTR/ERVL-MaLR	1	394	(2)	2167106
7723	6.8	2.9	0.3	chr2	177593955	177594935	(64598594)	C	LTR13	LTR/ERVK	(0)	1007	1	2167838
756	25.4	6.0	9.2	chr2	178029150	178029669	(64163860)	+	L1ME3D	LINE/L1	2656	3157	(2989)	2168442
28	7.3	0.0	2.2	chr2	178029686	178029730	(64163799)	+	(ATTGAAGACA)n	Simple_repeat	1	45	(0)	2168443
1689	18.9	9.0	3.8	chr2	178029731	178030098	(64163431)	+	MSTD	LTR/ERVL-MaLR	8	396	(0)	2168444
4367	24.8	5.9	5.8	chr2	178030099	178030593	(64162936)	+	L1ME3D	LINE/L1	3181	3690	(2456)	2168442
3530	12.2	3.8	3.4	chr2	179139378	179139973	(63053556)	+	LTR26	LTR/ERV1	1	599	(4)	2169755
1798	16.6	10.1	1.1	chr2	179901106	179901465	(62292064)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2170792
12	19.7	4.7	2.2	chr2	183037942	183037984	(59155545)	+	(CCCGC)n	Simple_repeat	1	45	(0)	2174822
19	23.7	2.5	4.8	chr2	183038303	183038383	(59155146)	+	(CAGCCCC)n	Simple_repeat	1	83	(0)	2174823
26	0.0	0.0	0.0	chr2	183038418	183038442	(59155087)	+	(GGC)n	Simple_repeat	1	25	(0)	2174824
16	15.2	2.0	6.0	chr2	183038554	183038602	(59154927)	+	(GGCCCT)n	Simple_repeat	1	50	(0)	2174825
1664	20.1	3.5	2.8	chr2	184262921	184263313	(57930216)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2176331
18	22.9	5.9	1.4	chr2	184598561	184598628	(57594901)	+	(GCC)n	Simple_repeat	1	72	(0)	2176765
1714	21.6	2.0	3.2	chr2	186273016	186273416	(55920113)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2178836
2142	10.3	1.8	0.0	chr2	186273428	186273708	(55919821)	+	AluSp	SINE/Alu	2	287	(26)	2178837
1981	16.7	7.8	0.0	chr2	186549307	186549671	(55643858)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2179207
1401	17.3	0.0	5.8	chr2	186549691	186549951	(55643578)	C	L1MA4	LINE/L1	(0)	6300	6049	2179208
7710	12.0	0.4	0.0	chr2	187492945	187494042	(54699487)	C	THE1B-int	LTR/ERVL-MaLR	(478)	1102	1	2180465
4634	26.8	8.4	3.5	chr2	188045747	188046794	(54146735)	+	MLT1A1-int	LTR/ERVL-MaLR	616	1735	(0)	2181149
1540	21.8	6.5	0.5	chr2	188046799	188047176	(54146353)	+	MLT1A1	LTR/ERVL-MaLR	5	406	(2)	2181149
950	20.3	17.1	3.5	chr2	188407993	188408360	(53785169)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	2181618
1563	19.8	2.5	16.7	chr2	189192731	189193191	(53000338)	+	MSTD	LTR/ERVL-MaLR	1	394	(2)	2182506
17	3.2	5.9	2.8	chr2	189784481	189784514	(52409015)	+	(GCGGGT)n	Simple_repeat	1	36	(0)	2183366
1548	21.4	8.6	0.6	chr2	190116174	190116535	(52076994)	C	MSTD	LTR/ERVL-MaLR	(2)	394	1	2183872
21	4.1	0.0	0.0	chr2	190648514	190648538	(51544991)	+	(T)n	Simple_repeat	1	25	(0)	2184671
17	23.9	2.0	0.0	chr2	190648836	190648885	(51544644)	+	(GCCCCC)n	Simple_repeat	1	51	(0)	2184672
193	33.3	2.2	0.0	chr2	197877495	197877581	(44315948)	+	L3	LINE/CR1	1885	1973	(2126)	2194707
492	30.7	11.6	2.8	chr2	198275373	198275623	(43917906)	+	L2b	LINE/L2	1820	2095	(1324)	2195304
1952	17.3	1.6	2.4	chr2	198275625	198276002	(43917527)	C	MSTD	LTR/ERVL-MaLR	(0)	396	22	2195305
385	21.9	0.0	0.0	chr2	198276109	198276190	(43917339)	+	MER94	DNA/hAT-Blackjack	43	124	(10)	2195306
783	23.4	13.1	0.0	chr2	199612803	199612994	(42580535)	C	MER58A	DNA/hAT-Charlie	(3)	221	1	2197098
1773	17.5	8.9	2.0	chr2	199613009	199613404	(42580125)	C	MSTC	LTR/ERVL-MaLR	(0)	428	3	2197099
14	18.0	8.0	0.0	chr2	200526339	200526388	(41667141)	+	(TCCGGCC)n	Simple_repeat	1	54	(0)	2198471
257	29.8	8.1	0.9	chr2	200526502	200526616	(41666913)	+	L2a	LINE/L2	3300	3423	(3)	2198472
322	25.0	5.7	0.0	chr2	200889152	200889251	(41304278)	C	MER94	DNA/hAT-Blackjack	(6)	128	23	2199071
369	24.6	22.1	0.0	chr2	200889717	200889903	(41303626)	C	MIR	SINE/MIR	(21)	241	2	2199072
2225	12.7	0.3	0.0	chr2	200966492	200966798	(41226731)	+	AluSp	SINE/Alu	1	308	(5)	2199244
921	22.6	5.2	9.4	chr2	202749945	202750232	(39443297)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	98	2202637
1999	15.9	0.0	0.7	chr2	202750233	202750534	(39442995)	+	AluJb	SINE/Alu	5	304	(8)	2202638
497	30.8	6.5	1.4	chr2	203889243	203889410	(38304119)	C	MIR	SINE/MIR	(0)	262	85	2204808
1594	20.5	11.9	0.0	chr2	203889411	203889757	(38303772)	C	MSTD	LTR/ERVL-MaLR	(0)	396	3	2204809
497	30.8	6.5	1.4	chr2	203889758	203889805	(38303724)	C	MIR	SINE/MIR	(178)	84	35	2204808
21	7.7	0.0	0.0	chr2	203889871	203889898	(38303631)	+	(T)n	Simple_repeat	1	28	(0)	2204810
15	10.9	4.4	6.4	chr2	206085808	206085852	(36107677)	+	(GCCC)n	Simple_repeat	1	47	(0)	2207944
1100	9.9	8.0	1.7	chr2	206115098	206115272	(36078257)	+	MLT1A1-int	LTR/ERVL-MaLR	1549	1735	(0)	2208024
926	19.6	7.2	3.0	chr2	206115273	206115562	(36077967)	+	MLT1A1	LTR/ERVL-MaLR	1	315	(50)	2208024
4667	7.0	0.8	0.2	chr2	206860223	206860825	(35332704)	C	L1PA10	LINE/L1	(13)	6155	5549	2209241
2334	14.0	2.6	5.9	chr2	206860826	206861067	(35332462)	+	MSTC	LTR/ERVL-MaLR	187	426	(2)	2209240
17	23.9	5.6	0.0	chr2	207165736	207165789	(35027740)	+	GA-rich	Low_complexity	1	57	(0)	2209617
16	24.0	0.0	0.0	chr2	207166018	207166052	(35027477)	+	(C)n	Simple_repeat	1	35	(0)	2209618
15	27.2	0.0	0.0	chr2	207166071	207166112	(35027417)	+	(TCC)n	Simple_repeat	1	42	(0)	2209619
2363	10.1	0.0	0.0	chr2	207634576	207634871	(34558658)	+	AluSg	SINE/Alu	1	296	(14)	2210362
1547	16.9	13.4	2.6	chr2	207634872	207635184	(34558345)	C	MSTD	LTR/ERVL-MaLR	(33)	363	1	2210361
465	25.6	6.4	14.7	chr2	207635185	207635410	(34558119)	+	MER102c	DNA/hAT-Charlie	110	292	(39)	2210360
2544	16.3	9.3	1.3	chr2	211269456	211269978	(30923551)	C	LTR49	LTR/ERV1	(26)	569	1	2215372
868	23.7	5.9	1.9	chr2	211269979	211270185	(30923344)	+	MSTD	LTR/ERVL-MaLR	176	391	(5)	2215371
2064	17.3	3.5	0.8	chr2	215524095	215524479	(26669050)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2221230
1074	32.2	15.8	4.8	chr2	215524480	215524759	(26668770)	C	L2b	LINE/L2	(625)	2794	2453	2221228
16	6.3	5.7	2.7	chr2	216081863	216081897	(26111632)	+	(CCCGG)n	Simple_repeat	1	37	(0)	2222151
16	19.6	0.0	0.0	chr2	216082042	216082071	(26111458)	+	A-rich	Low_complexity	1	30	(0)	2222152
2050	18.1	1.3	1.5	chr2	216397971	216398367	(25795162)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2222676
268	22.3	3.5	3.5	chr2	216398368	216398483	(25795046)	C	L1MC5	LINE/L1	(263)	9041	8926	2222677
1191	22.0	11.6	3.9	chr2	216448939	216449302	(25744227)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2222770
1682	18.4	6.8	2.1	chr2	217177446	217177822	(25015707)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2224013
17	26.1	1.6	1.6	chr2	218398557	218398617	(23794912)	+	(CCCCT)n	Simple_repeat	1	62	(0)	2226036
14	23.7	6.8	0.0	chr2	218398637	218398695	(23794834)	+	(GCGCC)n	Simple_repeat	1	63	(0)	2226037
1407	20.1	13.4	0.0	chr2	218787523	218787865	(23405664)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2226813
1410	27.3	5.9	8.6	chr2	218787916	218788523	(23405006)	C	MLT1G	LTR/ERVL-MaLR	(0)	591	1	2226814
2544	13.2	5.8	1.2	chr2	219186828	219187138	(23006391)	+	MSTC	LTR/ERVL-MaLR	105	427	(1)	2227473
866	21.7	9.5	6.9	chr2	219339543	219339902	(22853627)	+	MLT1A	LTR/ERVL-MaLR	1	368	(13)	2227741
2273	8.8	1.4	1.4	chr2	219339906	219340199	(22853330)	+	AluSz	SINE/Alu	1	294	(18)	2227742
238	27.9	1.5	0.3	chr2	220621998	220622071	(21571458)	+	MIR	SINE/MIR	188	264	(4)	2229818
1642	18.4	9.6	1.1	chr2	220622098	220622459	(21571070)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2229819
10121	11.8	3.1	3.8	chr2	220925551	220927139	(21266390)	C	THE1B-int	LTR/ERVL-MaLR	(2)	1578	1	2230272
851	24.3	1.1	0.0	chr2	221118061	221118245	(21075284)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	204	2230566
2045	16.8	3.5	2.3	chr2	222688620	222689010	(19504519)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2232995
12	12.0	3.7	0.0	chr2	223041906	223041932	(19151597)	+	(TTTTA)n	Simple_repeat	1	28	(0)	2233625
122	17.3	0.4	1.6	chr2	223041926	223041939	(19151590)	+	(TTTC)n	Simple_repeat	1	14	(0)	2233626
568	25.6	3.7	3.3	chr2	224677101	224677315	(17516214)	C	L1ME3A	LINE/L1	(50)	6192	5915	2236358
2113	8.2	5.4	0.0	chr2	224677330	224677608	(17515921)	C	AluY	SINE/Alu	(14)	297	3	2236360
924	28.9	0.4	0.4	chr2	224979189	224979421	(17214108)	C	MIR	SINE/MIR	(21)	241	9	2236836
877	26.5	5.5	1.6	chr2	224979428	224979797	(17213732)	+	L2a	LINE/L2	2846	3224	(202)	2236835
1400	22.9	12.9	0.6	chr2	225057608	225057954	(17135575)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2236962
20	3.3	3.0	2.9	chr2	226799648	226799680	(15393849)	+	(CTC)n	Simple_repeat	1	34	(0)	2239468
2101	17.5	1.9	0.8	chr2	230564815	230565189	(11628340)	+	MSTD	LTR/ERVL-MaLR	1	379	(17)	2245289
20	0.0	0.0	0.0	chr2	230565194	230565215	(11628314)	+	(A)n	Simple_repeat	1	22	(0)	2245290
2224	13.1	1.5	3.4	chr2	230629073	230629181	(11564348)	+	L1MC1	LINE/L1	4937	5035	(1111)	2245384
2330	15.2	8.7	0.0	chr2	230629182	230629309	(11564220)	+	MSTC	LTR/ERVL-MaLR	3	137	(291)	2245386
27	6.0	0.0	0.0	chr2	230629310	230629344	(11564185)	+	(ATGGATTA)n	Simple_repeat	1	35	(0)	2245387
2330	15.2	8.7	0.0	chr2	230629345	230629604	(11563925)	+	MSTC	LTR/ERVL-MaLR	138	427	(1)	2245386
2224	13.1	1.5	3.4	chr2	230629605	230629837	(11563692)	+	L1MC1	LINE/L1	5036	5271	(875)	2245384
1339	19.6	8.0	1.9	chr2	230961655	230962015	(11231514)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	7	2245979
2299	9.9	0.3	1.6	chr2	231735742	231736044	(10457485)	+	AluSx	SINE/Alu	1	299	(13)	2247529
790	18.9	0.0	0.0	chr2	231736060	231736186	(10457343)	+	FLAM_A	SINE/Alu	3	129	(13)	2247530
2501	8.4	0.3	0.0	chr2	233405238	233405545	(8787984)	+	AluSp	SINE/Alu	2	310	(3)	2250487
1425	18.3	14.7	4.2	chr2	233405546	233405800	(8787729)	+	MSTD	LTR/ERVL-MaLR	88	396	(0)	2250486
31	7.2	2.3	0.0	chr2	233974870	233974913	(8218616)	+	(AG)n	Simple_repeat	1	45	(0)	2251204
2416	9.0	0.0	0.3	chr2	233975599	233975909	(8217620)	+	AluSx	SINE/Alu	1	310	(2)	2251205
654	34.0	0.9	0.0	chr2	234178681	234178889	(8014640)	+	LTR33	LTR/ERVL	28	238	(277)	2251512
505	27.9	4.2	0.0	chr2	234178937	234179072	(8014457)	+	LTR33	LTR/ERVL	355	496	(19)	2251512
20	6.9	0.0	0.0	chr2	234496974	234497004	(7696525)	+	(GCTCCC)n	Simple_repeat	1	31	(0)	2252077
38	27.5	1.7	5.0	chr2	234497099	234497275	(7696254)	+	(CCCCG)n	Simple_repeat	1	180	(0)	2252078
1714	16.0	3.3	3.0	chr2	234860798	234861147	(7332382)	C	MSTC	LTR/ERVL-MaLR	(0)	428	33	2252668
1727	13.7	17.4	0.6	chr2	236304956	236305293	(5888236)	C	MLT1A1	LTR/ERVL-MaLR	(1)	407	1	2254833
411	24.1	3.5	4.3	chr2	236643846	236643962	(5549567)	+	MLT1D	LTR/ERVL-MaLR	1	116	(389)	2255288
255	14.3	0.0	0.0	chr2	236643975	236644016	(5549513)	+	MSTD	LTR/ERVL-MaLR	1	42	(354)	2255289
963	14.8	1.8	0.0	chr2	236644017	236644178	(5549351)	+	MSTD	LTR/ERVL-MaLR	232	396	(0)	2255289
643	23.2	20.0	4.2	chr2	236644179	236644459	(5549070)	+	MLT1D	LTR/ERVL-MaLR	168	505	(0)	2255288
13	18.8	0.0	5.0	chr2	236750826	236750865	(5442664)	+	A-rich	Low_complexity	1	40	(0)	2255447
1991	18.9	1.1	1.4	chr2	236750915	236751278	(5442251)	C	MLT1A0	LTR/ERVL-MaLR	(1)	364	2	2255448
2308	17.0	2.5	1.3	chr2	237535037	237535424	(4658105)	C	MSTD	LTR/ERVL-MaLR	(3)	393	1	2256488
3782	26.7	6.8	3.2	chr2	239782212	239783121	(2410408)	+	BLACKJACK	DNA/hAT-Blackjack	584	1507	(1462)	2259319
1334	18.5	20.7	2.5	chr2	239783122	239783443	(2410086)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2259321
3782	26.7	6.8	3.2	chr2	239783444	239783571	(2409958)	+	BLACKJACK	DNA/hAT-Blackjack	1508	1634	(1335)	2259319
13	7.0	10.0	0.0	chr2	240159667	240159696	(2033833)	+	(CTGC)n	Simple_repeat	1	33	(0)	2259759
2152	12.7	0.6	1.3	chr2	240159766	240160079	(2033450)	C	AluSx	SINE/Alu	(0)	312	1	2259760
1589	21.7	5.6	0.0	chr2	240581381	240581748	(1611781)	+	MSTD	LTR/ERVL-MaLR	1	390	(6)	2260184
457	31.9	6.6	4.3	chr2	240645962	240646288	(1547241)	C	MER90	LTR/ERV1	(6)	569	235	2260246
4571	8.7	2.6	1.9	chr2	241525501	241526508	(667021)	+	MER11A	LTR/ERVK	1	1266	(0)	2261280
1784	19.2	1.7	3.1	chr2	241526509	241526867	(666662)	C	MSTD	LTR/ERVL-MaLR	(41)	355	2	2261279
1406	19.2	13.4	3.1	chr2	241578010	241578390	(615139)	+	MSTC	LTR/ERVL-MaLR	3	428	(0)	2261370
274	32.3	5.3	3.2	chr2	241578391	241578587	(614942)	+	L1M5	LINE/L1	4505	4699	(1447)	2261369
462	27.3	0.3	0.2	chr2	241822669	241823865	(369664)	+	(CTCTCT)n	Simple_repeat	1	1201	(0)	2261745
991	17.3	4.6	0.5	chr2	241960160	241960368	(233161)	+	MER57A-int	LTR/ERV1	919	1136	(5051)	2261899
16	14.7	0.0	0.0	chr20	326410	326439	(64117728)	+	(CGA)n	Simple_repeat	1	30	(0)	2262667
17	15.4	2.8	0.0	chr20	326555	326590	(64117577)	+	(GCC)n	Simple_repeat	1	37	(0)	2262668
27	30.0	0.0	0.0	chr20	326590	326674	(64117493)	+	GA-rich	Low_complexity	1	85	(0)	2262669
1691	17.7	3.3	2.0	chr20	641316	641615	(63802552)	+	AluJo	SINE/Alu	5	308	(4)	2263403
20	20.3	2.1	0.0	chr20	641629	641675	(63802492)	+	(ACA)n	Simple_repeat	1	48	(0)	2263404
14	35.9	0.0	0.0	chr20	653096	653162	(63791005)	+	(GCCCG)n	Simple_repeat	1	67	(0)	2263435
13	14.8	4.0	10.4	chr20	653483	653556	(63790611)	+	G-rich	Low_complexity	1	77	(0)	2263436
16	14.2	0.0	0.0	chr20	653539	653569	(63790598)	+	(GCGGGG)n	Simple_repeat	1	31	(0)	2263437
12	18.3	5.4	0.0	chr20	1266254	1266290	(63177877)	+	(CCCT)n	Simple_repeat	1	39	(0)	2264709
12	25.5	3.8	1.8	chr20	1266459	1266511	(63177656)	+	G-rich	Low_complexity	1	55	(0)	2264710
347	27.2	6.6	3.4	chr20	1365344	1365461	(63078706)	+	MLT1L	LTR/ERVL-MaLR	38	159	(451)	2264881
1799	18.6	6.3	3.1	chr20	1365521	1365903	(63078264)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2264882
2106	14.1	2.9	0.3	chr20	1844042	1844345	(62599822)	+	AluSx1	SINE/Alu	1	312	(0)	2265721
2018	18.6	0.8	6.0	chr20	1844346	1844591	(62599576)	+	MSTD	LTR/ERVL-MaLR	161	396	(0)	2265720
967	26.4	14.9	2.6	chr20	1844592	1844702	(62599465)	C	L2a	LINE/L2	(326)	3100	2951	2265719
186	28.2	16.1	2.5	chr20	2236529	2236608	(62207559)	C	L2c	LINE/L2	(4)	3383	3291	2266552
468	20.3	7.2	2.3	chr20	2507713	2507843	(61936324)	+	L1MC5	LINE/L1	9167	9304	(0)	2267084
16	19.2	0.0	0.0	chr20	2821823	2821852	(61622315)	+	(T)n	Simple_repeat	1	30	(0)	2267651
2479	14.6	3.3	2.6	chr20	4051442	4051809	(60392358)	+	MSTC	LTR/ERVL-MaLR	55	425	(3)	2270028
2072	13.9	0.0	2.6	chr20	4055122	4055320	(60388847)	+	AluSx1	SINE/Alu	111	302	(10)	2270037
1622	20.2	6.1	2.1	chr20	4055321	4055532	(60388635)	+	MSTD	LTR/ERVL-MaLR	183	395	(1)	2270036
533	14.9	7.3	1.0	chr20	4108632	4108733	(60335434)	+	MER5A	DNA/hAT-Charlie	3	111	(78)	2270147
229	29.3	7.6	5.0	chr20	4108864	4109003	(60335164)	+	L2	LINE/L2	2719	2862	(557)	2270148
4014	15.5	2.4	2.7	chr20	4204901	4205156	(60239011)	C	L1MD	LINE/L1	(2812)	3334	3079	2270357
3059	17.3	3.4	3.3	chr20	4205157	4205697	(60238470)	C	LTR9D	LTR/ERV1	(0)	645	100	2270358
1433	28.1	3.5	1.5	chr20	4465719	4466194	(59977973)	+	LTR16C	LTR/ERVL	4	489	(0)	2270785
570	29.2	7.8	10.8	chr20	4914088	4914760	(59529407)	+	L1ME4b	LINE/L1	67	576	(316)	2271552
1597	16.9	8.2	0.0	chr20	4914761	4915039	(59529128)	+	AluSx	SINE/Alu	3	306	(6)	2271553
570	30.1	9.0	4.4	chr20	4915040	4915086	(59529081)	+	L1ME4b	LINE/L1	577	620	(272)	2271552
1103	24.4	6.6	8.7	chr20	7048575	7048977	(57395190)	C	MSTD	LTR/ERVL-MaLR	(0)	396	3	2275347
878	31.8	8.8	3.3	chr20	8766126	8766725	(55677442)	C	L2a	LINE/L2	(3)	3423	2766	2277787
456	17.9	18.3	0.0	chr20	8766726	8766859	(55677308)	C	MER5A1	DNA/hAT-Charlie	(2)	164	1	2277788
878	31.7	4.3	5.0	chr20	8766860	8766996	(55677171)	C	L2a	LINE/L2	(654)	2765	2632	2277787
1152	19.9	16.4	0.9	chr20	15870426	15870769	(48573398)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	2288536
1627	22.5	2.5	1.5	chr20	17290701	17291092	(47153075)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2290621
17	17.8	1.7	6.8	chr20	17968482	17968539	(46475628)	+	(GCC)n	Simple_repeat	1	59	(0)	2291818
13	11.2	14.6	0.0	chr20	18138192	18138239	(46305928)	+	(TGCGGC)n	Simple_repeat	1	55	(0)	2292194
6880	20.9	9.7	13.6	chr20	18434568	18435311	(46008856)	+	L1M4a2	LINE/L1	67	862	(1794)	2292658
388	29.2	4.5	3.3	chr20	19535618	19535769	(44908398)	+	MamRep1879	DNA/hAT-Tip100?	2	155	(61)	2294265
1263	20.1	9.7	2.6	chr20	19535770	19536104	(44908063)	C	MSTD	LTR/ERVL-MaLR	(0)	396	6	2294266
42	7.7	6.7	3.2	chr20	19758154	19758242	(44685925)	+	(CCT)n	Simple_repeat	1	95	(0)	2294579
14	20.5	0.0	2.4	chr20	19758513	19758553	(44685614)	+	G-rich	Low_complexity	1	41	(0)	2294580
20	0.0	0.0	0.0	chr20	21192280	21192301	(43251866)	+	(T)n	Simple_repeat	1	22	(0)	2296739
811	18.3	0.0	0.0	chr20	21192318	21192448	(43251719)	C	FLAM_A	SINE/Alu	(11)	131	1	2296740
12	24.6	0.0	2.5	chr20	21397449	21397488	(43046679)	+	(CGC)n	Simple_repeat	1	40	(0)	2297035
1329	21.2	14.1	1.2	chr20	21533993	21534336	(42909831)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2297219
946	21.0	8.7	4.2	chr20	22710134	22710471	(41733696)	C	MSTC	LTR/ERVL-MaLR	(17)	411	2	2298764
182	33.0	9.9	2.7	chr20	23098507	23098618	(41345549)	+	L2b	LINE/L2	2705	2825	(594)	2299228
1463	16.8	15.2	1.4	chr20	23405915	23406265	(41037902)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	2299669
1279	22.0	10.6	13.1	chr20	23406266	23406463	(41037704)	+	L1MB8	LINE/L1	5978	6167	(11)	2299666
1543	19.6	13.2	1.7	chr20	25018066	25018413	(39425754)	+	MSTD	LTR/ERVL-MaLR	1	394	(2)	2301597
463	27.6	5.1	2.1	chr20	25018526	25018711	(39425456)	+	MIR	SINE/MIR	15	203	(59)	2301598
14	15.4	5.6	0.0	chr20	25057940	25057975	(39386192)	+	(GCT)n	Simple_repeat	1	38	(0)	2301646
18	25.3	1.3	5.1	chr20	25390705	25390781	(39053386)	+	(CCG)n	Simple_repeat	1	78	(0)	2302097
15	29.0	0.0	0.0	chr20	25390896	25390945	(39053222)	+	(CCCCCG)n	Simple_repeat	1	50	(0)	2302098
2308	29.1	5.8	6.1	chr20	25867794	25869361	(38574806)	C	SST1	Satellite/centr	(1)	1562	1	2302878
18	23.3	0.0	0.0	chr20	26209084	26209123	(38235044)	+	(C)n	Simple_repeat	1	40	(0)	2303449
8063	19.7	6.6	2.5	chr20	28565013	28565466	(35878701)	C	LTR53-int	LTR/ERVL	(1471)	1858	1390	2303595
1942	20.6	9.7	0.9	chr20	28565467	28565898	(35878269)	C	MLT2B1	LTR/ERVL	(46)	474	1	2303597
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
2214	16.8	1.3	5.6	chr20	29789873	29790281	(34653886)	C	MSTD	LTR/ERVL-MaLR	(2)	394	4	2304559
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
24	25.2	2.7	1.3	chr20	31514352	31514424	(32929743)	+	(GC)n	Simple_repeat	1	75	(0)	2306155
15	32.0	3.4	2.2	chr20	33993917	33994005	(30450162)	+	(GCG)n	Simple_repeat	1	92	(0)	2312095
14	31.0	0.0	6.0	chr20	33994284	33994315	(30449852)	+	(GCCCCC)n	Simple_repeat	1	57	(27)	2312096
12	19.3	0.0	5.1	chr20	33994316	33994354	(30449813)	+	(CCCGCCC)n	Simple_repeat	1	39	(0)	2312097
14	31.0	0.0	6.0	chr20	33994355	33994367	(30449800)	+	(GCCCCC)n	Simple_repeat	58	84	(0)	2312096
15	4.8	0.0	0.0	chr20	34216182	34216203	(30227964)	+	(GCAA)n	Simple_repeat	1	22	(0)	2312528
14	5.0	0.0	0.0	chr20	34216252	34216272	(30227895)	+	(CGC)n	Simple_repeat	1	21	(0)	2312529
1616	25.4	9.5	0.5	chr20	34216376	34216932	(30227235)	C	L1MEg	LINE/L1	(925)	5221	4610	2312530
875	25.2	6.1	4.0	chr20	35227353	35227625	(29216542)	+	L3	LINE/CR1	3712	3990	(109)	2314818
268	37.7	13.6	5.9	chr20	36402945	36403086	(28041081)	+	L3	LINE/CR1	3634	3761	(338)	2317534
1606	17.5	12.1	1.7	chr20	36403087	36403440	(28040727)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2317535
268	37.7	13.6	5.9	chr20	36403441	36403621	(28040546)	+	L3	LINE/CR1	3762	3985	(114)	2317534
1881	15.3	10.2	2.5	chr20	36563279	36563640	(27880527)	C	MSTD	LTR/ERVL-MaLR	(3)	393	1	2317899
289	32.6	6.4	0.0	chr20	36563670	36563816	(27880351)	+	LTR85a	LTR/Gypsy?	535	691	(11)	2317900
2305	9.4	1.6	0.3	chr20	36792226	36792534	(27651633)	+	AluSq10	SINE/Alu	1	313	(0)	2318451
872	25.9	1.9	3.8	chr20	36792535	36792599	(27651568)	C	MER63A	DNA/hAT-Blackjack	(149)	61	1	2318450
907	26.1	0.0	1.5	chr20	40849667	40849868	(23594299)	+	MIRb	SINE/MIR	59	257	(11)	2326550
422	28.9	5.2	9.7	chr20	40849974	40850296	(23593871)	C	L2a	LINE/L2	(1)	3425	3096	2326551
690	26.6	8.8	6.9	chr20	43772353	43772670	(20671497)	C	LTR16A1	LTR/ERVL	(90)	361	33	2331956
1289	15.2	21.5	6.7	chr20	43772671	43773030	(20671137)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	2331957
690	25.7	8.8	7.9	chr20	43773031	43773063	(20671104)	C	LTR16A1	LTR/ERVL	(424)	32	1	2331956
1528	16.9	14.7	5.3	chr20	43796691	43797047	(20647120)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2332022
406	28.1	20.6	0.4	chr20	43906668	43906896	(20537271)	+	L2c	LINE/L2	3086	3372	(15)	2332233
493	20.7	9.5	4.3	chr20	44301166	44301368	(20142799)	C	MIR3	SINE/MIR	(16)	214	22	2333129
2059	18.6	4.6	0.3	chr20	44301377	44301753	(20142414)	C	MSTD	LTR/ERVL-MaLR	(2)	394	1	2333130
16	16.3	0.0	8.8	chr20	45406547	45406603	(19037564)	+	(CCCGCCT)n	Simple_repeat	1	57	(0)	2335583
30	0.0	7.7	0.0	chr20	45834377	45834415	(18609752)	+	(CGAGGACGA)n	Simple_repeat	1	42	(0)	2336327
13	23.0	6.6	3.7	chr20	46651408	46651483	(17792684)	+	(GCCGGC)n	Simple_repeat	1	81	(0)	2338130
215	27.5	0.0	9.0	chr20	46651661	46651760	(17792407)	+	MIR	SINE/MIR	69	159	(109)	2338131
548	22.8	10.4	5.9	chr20	46651767	46651882	(17792285)	+	MIRb	SINE/MIR	16	161	(107)	2338132
2790	8.4	0.0	0.5	chr20	46651883	46652255	(17791912)	+	L1PA13	LINE/L1	5788	6158	(5)	2338133
2044	11.8	3.3	20.1	chr20	47461566	47461990	(16982177)	C	MSTC	LTR/ERVL-MaLR	(0)	428	97	2340154
2415	13.5	6.5	4.8	chr20	48250278	48250670	(16193497)	+	MSTC	LTR/ERVL-MaLR	1	406	(22)	2341745
5162	14.1	2.4	3.3	chr20	48250671	48251224	(16192943)	+	MER4D	LTR/ERV1	1	544	(359)	2341746
17	25.9	6.0	1.1	chr20	49277930	49278013	(15166154)	+	G-rich	Low_complexity	1	89	(0)	2344005
11	26.9	4.1	0.0	chr20	49278136	49278158	(15166009)	+	(GGCGGA)n	Simple_repeat	1	50	(0)	2344006
13	13.2	0.0	0.0	chr20	49278159	49278183	(15165984)	+	(GAG)n	Simple_repeat	1	25	(0)	2344007
1922	22.1	8.4	2.2	chr20	49769042	49769261	(14674906)	C	LTR16C	LTR/ERVL	(0)	489	276	2345270
1454	19.0	15.2	1.2	chr20	49769262	49769601	(14674566)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2345271
1922	22.1	8.4	2.2	chr20	49769602	49769838	(14674329)	C	LTR16C	LTR/ERVL	(214)	275	1	2345270
45	0.0	0.0	2.3	chr20	50162721	50162763	(14281404)	+	(AC)n	Simple_repeat	1	43	(0)	2346239
870	24.1	6.8	8.1	chr20	50162764	50163125	(14281042)	C	MLT1J	LTR/ERVL-MaLR	(64)	448	28	2346238
2160	4.9	4.8	3.5	chr20	50741558	50741845	(13702322)	C	AluY	SINE/Alu	(19)	292	1	2347615
1977	15.4	0.3	3.1	chr20	53135585	53135902	(11308265)	C	AluJr	SINE/Alu	(1)	311	3	2352858
1845	15.0	15.7	2.7	chr20	53135943	53136313	(11307854)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	2352859
587	13.5	0.0	0.0	chr20	53359459	53359554	(11084613)	C	MER53	DNA/hAT	(97)	96	1	2353312
315	23.2	2.4	2.4	chr20	53359555	53359637	(11084530)	+	MER46C	DNA/TcMar-Tigger	70	152	(186)	2353313
428	29.9	4.0	1.8	chr20	53359642	53359811	(11084356)	C	L2	LINE/L2	(350)	3069	2896	2353314
250	32.1	1.2	0.0	chr20	53359811	53359894	(11084273)	C	MIRb	SINE/MIR	(141)	127	43	2353315
2368	14.4	5.3	2.0	chr20	53827049	53827453	(10616714)	C	MSTC	LTR/ERVL-MaLR	(19)	409	1	2354453
18	9.8	4.1	5.9	chr20	56359085	56359133	(8085034)	+	(GCGCCCT)n	Simple_repeat	1	51	(0)	2358875
12	14.7	3.3	0.0	chr20	56359112	56359141	(8085026)	+	(CCCTGG)n	Simple_repeat	1	31	(0)	2358876
241	27.9	12.7	0.0	chr20	56359363	56359471	(8084696)	C	MIR3	SINE/MIR	(56)	152	33	2358877
355	23.9	13.7	4.1	chr20	56359556	56359825	(8084342)	+	MER113	DNA/hAT-Charlie	176	475	(46)	2358878
2264	18.2	1.5	0.5	chr20	56755964	56756355	(7687812)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2359785
244	28.4	10.0	0.0	chr20	57255274	57255354	(7188813)	+	MIRb	SINE/MIR	124	213	(17)	2360848
2185	11.9	0.0	0.0	chr20	57255518	57255828	(7188339)	+	AluSx1	SINE/Alu	1	311	(1)	2360849
2372	8.2	0.0	0.0	chr20	58980597	58980889	(5463278)	C	AluSz	SINE/Alu	(19)	293	1	2363760
239	6.7	0.0	0.0	chr20	58980914	58980943	(5463224)	C	ORSL	DNA/hAT-Tip100	(184)	91	62	2363757
189	24.4	0.0	0.0	chr20	58980963	58981003	(5463164)	C	MIRc	SINE/MIR	(115)	153	113	2363761
206	30.7	13.8	1.2	chr20	61331199	61331363	(3112804)	+	L2a	LINE/L2	2653	2841	(578)	2367236
2105	11.9	0.0	2.6	chr20	62090862	62091163	(2353004)	C	AluSg	SINE/Alu	(15)	295	2	2368109
2268	16.1	3.0	3.0	chr20	62091164	62091540	(2352627)	C	MSTC	LTR/ERVL-MaLR	(50)	378	1	2368108
695	29.6	16.5	3.9	chr20	62253020	62253505	(2190662)	C	L1MC5	LINE/L1	(597)	8707	8173	2368355
1075	21.3	9.2	19.1	chr20	62253506	62253782	(2190385)	C	MSTD	LTR/ERVL-MaLR	(0)	396	187	2368357
2239	11.4	0.0	1.9	chr20	62253783	62254097	(2190070)	C	AluSq	SINE/Alu	(4)	309	1	2368358
1704	23.4	7.5	1.4	chr20	62615234	62615718	(1828449)	+	L1MB3	LINE/L1	5569	6085	(98)	2368761
1200	17.9	10.8	0.8	chr20	62627948	62628212	(1815955)	C	MSTD	LTR/ERVL-MaLR	(8)	388	94	2368768
2381	4.5	3.0	0.7	chr20	62795775	62796066	(1648101)	C	AluSq2	SINE/Alu	(14)	299	1	2368961
8206	5.6	1.7	0.1	chr20	62873549	62874539	(1569628)	+	LTR13	LTR/ERVK	1	1007	(0)	2369061
6933	4.8	0.2	0.2	chr20	63250954	63251864	(1192303)	C	LTR13	LTR/ERVK	(95)	912	2	2369423
812	20.9	19.1	0.4	chr20	63501202	63501465	(942702)	+	MSTD	LTR/ERVL-MaLR	21	345	(51)	2369621
252	13.5	1.3	0.0	chr20	63501503	63501570	(942597)	+	MSTD	LTR/ERVL-MaLR	339	443	(14)	2369621
13	20.1	0.0	2.8	chr20	63978950	63978985	(465182)	+	(TCCG)n	Simple_repeat	1	36	(0)	2370320
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
40632	0.2	1.2	0.8	chr21	8214773	8218941	(38491042)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373279
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
24	15.5	7.0	0.0	chr21	8401981	8402037	(38307946)	+	(CG)n	Simple_repeat	1	61	(0)	2373511
14	13.3	9.8	0.0	chr21	8402028	8402068	(38307915)	+	(CGTC)n	Simple_repeat	1	45	(0)	2373512
312	38.2	6.5	3.6	chr21	8419786	8420171	(38289812)	C	HAL1	LINE/L1	(1230)	1277	880	2373573
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
15708	0.1	0.0	0.0	chr21	8436876	8438744	(38271239)	+	SSU-rRNA_Hsa	rRNA	1	1869	(0)	2373613
13	8.1	3.6	3.5	chr21	8438766	8438793	(38271190)	+	(CCG)n	Simple_repeat	1	29	(0)	2373614
12	18.8	2.6	2.6	chr21	8438825	8438862	(38271121)	+	(CGCGTG)n	Simple_repeat	1	39	(0)	2373615
16	8.3	0.0	0.0	chr21	8438857	8438882	(38271101)	+	(CGTT)n	Simple_repeat	1	26	(0)	2373616
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
1738	18.7	0.7	1.0	chr21	9144154	9144447	(37565536)	C	AluJb	SINE/Alu	(18)	294	2	2374279
3424	21.2	4.9	9.9	chr21	9144448	9144867	(37565116)	C	LTR49-int	LTR/ERV1	(1760)	4571	4283	2374278
489	31.7	9.4	3.9	chr21	9176517	9176746	(37533237)	C	MIR	SINE/MIR	(17)	245	2	2374315
379	33.3	5.9	0.0	chr21	9176780	9176953	(37533030)	+	MIR	SINE/MIR	54	238	(24)	2374316
404	15.6	1.5	0.0	chr21	9247151	9247214	(37462769)	+	AluYj4	SINE/Alu	224	288	(23)	2374339
1263	30.4	12.1	1.4	chr21	9257066	9257711	(37452272)	C	L2	LINE/L2	(1779)	1640	916	2374355
2761	17.5	4.4	0.8	chr21	9317965	9318489	(37391494)	+	MER52A	LTR/ERV1	1211	1755	(0)	2374416
1074	23.2	9.1	11.4	chr21	9728199	9728602	(36981381)	C	MSTD	LTR/ERVL-MaLR	(2)	394	1	2374783
1683	29.2	6.3	6.8	chr21	9810881	9812152	(36897831)	C	SST1	Satellite/centr	(14)	1549	284	2374881
19	33.9	0.0	1.2	chr21	9812172	9812228	(36897755)	+	(GACA)n	Simple_repeat	1	86	(0)	2374882
18	10.4	0.0	0.0	chr21	9812229	9812259	(36897724)	+	(ACACAC)n	Simple_repeat	1	31	(0)	2374883
1892	29.2	5.1	6.4	chr21	9812264	9813560	(36896423)	C	SST1	Satellite/centr	(1)	1562	284	2374884
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
21	16.7	0.0	2.4	chr21	9819273	9819314	(36890669)	+	(AC)n	Simple_repeat	1	42	(0)	2374898
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
1523	28.6	6.2	6.9	chr21	9836200	9837509	(36872474)	C	SST1	Satellite/centr	(1)	1562	262	2374935
610	35.4	9.3	4.8	chr21	14484146	14485109	(32224874)	C	L2c	LINE/L2	(12)	3375	2351	2377899
3943	22.6	6.2	5.6	chr21	15742711	15743779	(30966204)	C	LTR27E	LTR/ERV1	(0)	1077	7	2379561
226	12.2	8.9	0.0	chr21	15743821	15743861	(30966122)	C	LTR27D	LTR/ERV1	(570)	45	1	2379562
795	19.7	0.0	0.0	chr21	16925680	16925816	(29784167)	+	MSTD	LTR/ERVL-MaLR	3	139	(257)	2381017
1184	16.2	0.6	0.0	chr21	16925832	16926010	(29783973)	+	AluJb	SINE/Alu	131	310	(2)	2381018
905	19.9	7.1	0.8	chr21	16926022	16926264	(29783719)	+	MSTD	LTR/ERVL-MaLR	145	408	(0)	2381017
1167	24.8	6.6	8.5	chr21	16926265	16926960	(29783023)	+	Zaphod	DNA/hAT-Tip100	238	918	(3113)	2381019
1298	22.3	1.6	0.0	chr21	18612116	18612362	(28097621)	C	MSTD	LTR/ERVL-MaLR	(0)	396	146	2383269
1724	11.0	0.0	0.0	chr21	18612365	18612592	(28097391)	+	AluSx4	SINE/Alu	83	310	(0)	2383270
874	29.0	4.9	3.6	chr21	20355029	20355332	(26354651)	+	MER92A	LTR/ERV1	3	310	(102)	2385547
693	19.1	5.0	0.1	chr21	24576142	24576293	(22133690)	+	MSTC	LTR/ERVL-MaLR	1	164	(293)	2391287
1298	22.9	10.6	1.1	chr21	24576332	24576689	(22133294)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2391288
1656	20.2	2.5	7.2	chr21	24650832	24651247	(22058736)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2391413
538	31.4	2.7	5.3	chr21	25852964	25853169	(20856814)	+	MIR	SINE/MIR	4	202	(60)	2393140
2149	18.8	0.5	1.8	chr21	25853170	25853564	(20856419)	C	MSTD	LTR/ERVL-MaLR	(4)	392	3	2393141
538	31.4	2.7	5.3	chr21	25853565	25853619	(20856364)	+	MIR	SINE/MIR	203	257	(5)	2393140
2205	15.6	4.4	0.0	chr21	28770479	28770850	(17939133)	+	MSTD	LTR/ERVL-MaLR	1	389	(7)	2397229
1625	20.3	8.1	3.5	chr21	28829270	28829646	(17880337)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2397321
2541	7.0	0.0	0.3	chr21	29019519	29019830	(17690153)	C	AluSx1	SINE/Alu	(1)	311	1	2397610
2250	28.2	1.3	3.2	chr21	31240228	31240860	(15469123)	+	L1M4	LINE/L1	20	640	(6877)	2400972
36	25.1	2.8	0.9	chr21	31410672	31410797	(15299186)	+	GA-rich	Low_complexity	1	128	(0)	2401278
2035	15.5	8.8	0.6	chr21	31435676	31436038	(15273945)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2401333
274	35.9	2.5	7.5	chr21	31436049	31436301	(15273682)	+	L2c	LINE/L2	3127	3366	(21)	2401334
14	15.6	3.4	8.2	chr21	31659922	31659980	(15050003)	+	(GCCCG)n	Simple_repeat	1	61	(0)	2401850
28	20.6	7.3	1.7	chr21	31660030	31660138	(15049845)	+	G-rich	Low_complexity	1	117	(0)	2401851
302	23.0	17.9	0.0	chr21	31660365	31660451	(15049532)	+	MER58C	DNA/hAT-Charlie	49	154	(61)	2401852
1545	17.9	14.1	4.2	chr21	31808789	31809143	(14900840)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2402130
361	33.1	1.5	1.5	chr21	31809225	31809356	(14900627)	C	L2b	LINE/L2	(2)	3373	3242	2402131
1831	16.4	2.9	5.7	chr21	32811687	32812036	(13897947)	+	MSTD	LTR/ERVL-MaLR	1	340	(56)	2403812
2221	11.6	1.6	0.0	chr21	33399326	33399628	(13310355)	+	AluSx1	SINE/Alu	5	312	(0)	2404886
2430	14.7	2.8	2.1	chr21	33399629	33399848	(13310135)	+	MSTC	LTR/ERVL-MaLR	213	428	(0)	2404885
1885	7.7	0.8	0.8	chr21	33671961	33672194	(13037789)	+	AluSp	SINE/Alu	1	234	(79)	2405423
1325	20.1	10.6	8.1	chr21	34826109	34826426	(11883557)	+	MSTD	LTR/ERVL-MaLR	1	337	(59)	2407223
2250	11.0	0.3	2.5	chr21	34826427	34826743	(11883240)	C	AluSz	SINE/Alu	(1)	311	2	2407224
1612	21.7	4.1	2.0	chr21	35542095	35542451	(11167532)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	2408268
3013	24.7	4.3	3.3	chr21	35542452	35543252	(11166731)	+	MER21C	LTR/ERVL	64	872	(66)	2408267
48	1.9	1.9	0.0	chr21	36123192	36123243	(10586740)	+	(AAAT)n	Simple_repeat	1	53	(0)	2409181
2369	13.8	3.5	3.0	chr21	36123342	36123767	(10586216)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	2409182
2381	16.2	5.1	1.9	chr21	36177498	36177911	(10532072)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	2409304
1433	17.7	7.4	10.4	chr21	36178036	36178208	(10531775)	+	MLT1B	LTR/ERVL-MaLR	1	175	(215)	2409305
182	21.6	0.0	5.1	chr21	36281468	36281506	(10428477)	+	Tigger19b	DNA/TcMar-Tigger	134	170	(380)	2409518
1345	17.3	18.2	1.8	chr21	36281622	36281951	(10428032)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2409519
1275	18.0	16.4	4.0	chr21	36903780	36904150	(9805833)	+	MSTC	LTR/ERVL-MaLR	1	426	(2)	2410638
203	33.5	2.8	3.4	chr21	36939387	36939565	(9770418)	+	MER5A	DNA/hAT-Charlie	7	184	(5)	2410693
1480	9.0	0.0	0.0	chr21	36939880	36940067	(9769916)	+	AluSx	SINE/Alu	114	301	(11)	2410694
2130	11.9	1.3	0.0	chr21	37579027	37579320	(9130663)	C	AluSc	SINE/Alu	(10)	299	2	2411823
1274	28.2	4.6	5.9	chr21	37579321	37579542	(9130441)	C	L1MEf	LINE/L1	(5480)	1557	1119	2411822
1728	19.8	6.6	4.2	chr21	38329940	38330297	(8379686)	C	MSTD	LTR/ERVL-MaLR	(2)	394	23	2412887
13	9.3	2.4	9.3	chr21	39313332	39313373	(7396610)	+	GA-rich	Low_complexity	1	43	(0)	2414333
14	0.0	0.0	4.5	chr21	39313516	39313537	(7396446)	+	(GAGC)n	Simple_repeat	1	22	(0)	2414334
26	0.0	0.0	0.0	chr21	39313590	39313614	(7396369)	+	(CGC)n	Simple_repeat	1	25	(0)	2414335
1516	19.2	11.7	0.8	chr21	39684531	39684882	(7025101)	C	MSTD	LTR/ERVL-MaLR	(0)	396	2	2415018
1879	20.7	5.3	5.2	chr21	39684883	39685248	(7024735)	C	MLT1D	LTR/ERVL-MaLR	(133)	372	1	2415017
1552	19.5	4.3	18.5	chr21	39816204	39816668	(6893315)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2415218
331	15.8	0.0	0.0	chr21	40979650	40979706	(5730277)	+	MSTD	LTR/ERVL-MaLR	1	57	(339)	2416801
747	20.6	3.9	3.5	chr21	40979705	40979928	(5730055)	+	MSTD	LTR/ERVL-MaLR	127	396	(0)	2416801
480	23.9	6.3	0.9	chr21	42666520	42666812	(4043171)	C	MLT1B	LTR/ERVL-MaLR	(26)	364	1	2419156
367	8.6	4.0	0.0	chr21	44481860	44481929	(2228054)	C	THE1D	LTR/ERVL-MaLR	(242)	133	58	2421806
352	10.3	4.0	0.0	chr21	44481922	44481991	(2227992)	C	THE1D	LTR/ERVL-MaLR	(242)	133	58	2421806
330	10.2	3.3	0.0	chr21	44481984	44482042	(2227941)	C	THE1D	LTR/ERVL-MaLR	(248)	133	73	2421807
553	13.0	2.0	8.3	chr21	44482046	44482154	(2227829)	C	THE1D	LTR/ERVL-MaLR	(248)	133	32	2421808
1721	18.1	12.4	2.6	chr21	45567748	45568132	(1141851)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	2422940
15	15.3	0.0	0.0	chr22	11042347	11042375	(39776093)	+	GA-rich	Low_complexity	1	29	(0)	2424821
2206	15.0	1.3	5.6	chr22	11310465	11310873	(39507595)	C	MSTD	LTR/ERVL-MaLR	(2)	394	4	2425026
2283	16.6	1.3	1.0	chr22	11571678	11572067	(39246401)	+	MSTD	LTR/ERVL-MaLR	4	394	(2)	2425187
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
1118	10.7	0.3	0.1	chr22	11814559	11816405	(39002063)	C	ACRO1	Satellite/acro	(55)	1851	1	2425389
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
1124	22.8	3.2	0.8	chr22	11900617	11900862	(38917606)	C	AluJr	SINE/Alu	(48)	264	13	2425511
290	22.2	1.5	0.5	chr22	11932477	11932565	(38885903)	C	L1P4	LINE/L1	(1123)	5023	4933	2425553
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
205	34.7	4.8	2.0	chr22	17158437	17158536	(33659932)	+	MIRb	SINE/MIR	34	136	(132)	2428338
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
1409	19.4	13.7	3.1	chr22	19573339	19573494	(31244974)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	184	2432244
39	0.0	4.7	0.0	chr22	19573495	19573537	(31244931)	+	(GGGCAGAA)n	Simple_repeat	1	45	(0)	2432245
1409	19.4	13.7	3.1	chr22	19573538	19573705	(31244763)	C	MLT1A0	LTR/ERVL-MaLR	(182)	183	1	2432244
2634	4.2	0.0	0.0	chr22	19695479	19695785	(31122683)	C	AluY	SINE/Alu	(4)	307	1	2432445
58	31.0	1.1	1.1	chr22	19717763	19717945	(31100523)	+	(CA)n	Simple_repeat	1	185	(0)	2432479
636	22.6	9.6	4.2	chr22	20523350	20523566	(30294902)	C	L1MC5a	LINE/L1	(0)	2777	2548	2433490
276	36.6	10.8	2.5	chr22	21643165	21643486	(29174982)	C	L2c	LINE/L2	(5)	3382	3031	2435591
16	15.8	0.0	2.7	chr22	21735482	21735518	(29082950)	+	(GCCC)n	Simple_repeat	1	37	(0)	2435784
15	17.2	2.0	5.8	chr22	21735618	21735668	(29082800)	+	(CGCCCCG)n	Simple_repeat	1	52	(0)	2435785
17	20.7	5.7	2.7	chr22	21735873	21735942	(29082526)	+	(CCCGCCT)n	Simple_repeat	1	74	(0)	2435786
707	27.7	7.5	2.9	chr22	23430953	23431442	(27387026)	C	L1MEc	LINE/L1	(1449)	1990	1194	2438283
235	27.5	16.4	2.1	chr22	23431666	23431806	(27386662)	C	L1MEc	LINE/L1	(6186)	901	737	2438283
12	17.3	5.1	6.5	chr22	24271045	24271103	(26547365)	+	(CGCCCG)n	Simple_repeat	1	62	(0)	2439767
12	21.9	3.5	5.0	chr22	24271090	24271147	(26547321)	+	(CCTGCG)n	Simple_repeat	1	60	(0)	2439768
709	28.6	3.2	0.0	chr22	24938848	24939029	(25879439)	+	MER91B	DNA/hAT-Tip100	2	189	(1)	2441035
242	33.1	2.7	4.0	chr22	24939030	24939153	(25879315)	C	MER5A	DNA/hAT-Charlie	(27)	162	38	2441034
272	36.4	2.1	1.4	chr22	24939034	24939178	(25879290)	+	MER5A	DNA/hAT-Charlie	43	188	(1)	2441036
16	4.5	0.0	0.0	chr22	25405326	25405348	(25413120)	+	(GCG)n	Simple_repeat	1	23	(0)	2442126
1920	23.0	1.3	0.5	chr22	25521846	25522238	(25296230)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2442405
512	34.1	0.9	4.4	chr22	26511938	26512164	(24306304)	C	MIRb	SINE/MIR	(8)	260	42	2444473
620	21.1	2.6	5.6	chr22	27240911	27240941	(23577527)	+	MIR	SINE/MIR	51	81	(181)	2446272
1729	19.6	3.5	3.3	chr22	27240942	27241336	(23577132)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2446273
500	29.5	11.2	6.5	chr22	27264813	27265233	(23553235)	C	L2c	LINE/L2	(1)	3386	2937	2446329
23	13.2	2.3	0.0	chr22	27265308	27265366	(23553102)	+	(TTG)n	Simple_repeat	1	60	(0)	2446330
1731	19.6	9.6	0.3	chr22	27338470	27338828	(23479640)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2446495
475	27.9	13.6	1.3	chr22	27338866	27339090	(23479378)	+	MIRb	SINE/MIR	4	260	(8)	2446496
17	32.8	2.2	2.1	chr22	29315398	29315488	(21502980)	+	G-rich	Low_complexity	1	93	(0)	2450310
391	35.5	7.2	3.7	chr22	30084003	30084122	(20734346)	+	MIR3	SINE/MIR	32	160	(48)	2451912
1838	17.1	5.5	2.4	chr22	30084123	30084505	(20733963)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2451913
391	35.5	7.2	3.7	chr22	30084506	30084545	(20733923)	+	MIR3	SINE/MIR	161	198	(10)	2451912
242	30.7	0.5	11.3	chr22	30909773	30909985	(19908483)	+	L1M5	LINE/L1	3634	3823	(2323)	2453600
1692	9.8	18.3	0.0	chr22	31015986	31016230	(19802238)	+	AluSq2	SINE/Alu	1	300	(13)	2453788
228	24.6	0.0	0.0	chr22	31016231	31016245	(19802223)	C	MSTC	LTR/ERVL-MaLR	(63)	333	319	2453789
772	15.6	1.8	7.0	chr22	31016236	31016407	(19802061)	+	MSTD	LTR/ERVL-MaLR	187	349	(47)	2453790
943	21.6	7.5	0.0	chr22	31016410	31016645	(19801823)	C	L1M4	LINE/L1	(637)	5547	5293	2453791
5596	24.9	4.5	7.1	chr22	31021853	31022105	(19796363)	C	MSTC-int	LTR/ERVL-MaLR	(1485)	250	9	2453789
1620	15.4	5.3	2.9	chr22	31022113	31022460	(19796008)	C	MSTC	LTR/ERVL-MaLR	(0)	428	72	2453789
1764	16.0	3.8	1.1	chr22	31022464	31022745	(19795723)	C	AluJb	SINE/Alu	(22)	290	1	2453804
13	26.0	1.7	4.9	chr22	32474941	32475000	(18343468)	+	(GCC)n	Simple_repeat	1	61	(0)	2457054
527	26.1	13.8	1.6	chr22	32962608	32962798	(17855670)	+	MIRb	SINE/MIR	10	227	(41)	2458074
251	28.9	4.2	2.6	chr22	33059469	33059585	(17758883)	C	L2a	LINE/L2	(701)	2718	2600	2458293
719	11.2	2.0	2.9	chr22	33059601	33059720	(17758748)	+	MSTD	LTR/ERVL-MaLR	1	110	(318)	2458295
1152	15.5	2.0	0.1	chr22	33059715	33059910	(17758558)	+	MSTD	LTR/ERVL-MaLR	218	457	(0)	2458295
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
1044	19.1	10.5	2.6	chr22	33178856	33179218	(17639250)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	2458515
555	26.7	7.6	3.3	chr22	33926472	33926552	(16891916)	C	LTR16E1	LTR/ERVL	(4)	534	450	2460052
1534	16.1	20.6	0.0	chr22	33926553	33926876	(16891592)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	2460053
1638	18.6	5.8	10.4	chr22	35088700	35089112	(15729356)	+	MSTD	LTR/ERVL-MaLR	1	393	(3)	2462230
997	22.4	6.5	5.2	chr22	35089113	35089452	(15729016)	C	LTR37A	LTR/ERV1	(46)	380	38	2462229
12	18.7	4.3	4.2	chr22	35372274	35372319	(15446149)	+	(CTC)n	Simple_repeat	1	48	(0)	2462818
370	25.4	17.5	2.6	chr22	35372450	35372506	(15445962)	+	L1MC4	LINE/L1	7514	7570	(472)	2462819
449	28.1	3.5	0.0	chr22	35433902	35434040	(15384428)	+	LTR67B	LTR/ERVL	44	187	(433)	2462984
274	30.1	8.1	2.6	chr22	35434123	35434238	(15384230)	+	LTR67B	LTR/ERVL	372	494	(126)	2462984
251	25.8	1.5	0.0	chr22	35434268	35434333	(15384135)	+	LTR67B	LTR/ERVL	554	620	(0)	2462984
411	28.3	3.3	5.8	chr22	35434402	35434555	(15383913)	C	MLT1K	LTR/ERVL-MaLR	(286)	309	160	2462985
358	23.2	12.4	0.6	chr22	36260795	36260950	(14557518)	C	MER112	DNA/hAT-Charlie	(84)	177	1	2464675
1294	24.4	7.4	1.6	chr22	36261098	36261464	(14557004)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	2464676
39	4.5	2.5	6.2	chr22	36703239	36703317	(14115151)	+	(GCG)n	Simple_repeat	1	81	(0)	2465662
14	21.3	2.6	0.0	chr22	38272954	38272991	(12545477)	+	(CGC)n	Simple_repeat	1	39	(0)	2469147
15	23.5	1.9	1.9	chr22	38273101	38273152	(12545316)	+	(CCGCCCC)n	Simple_repeat	1	53	(0)	2469148
12	19.3	4.7	2.2	chr22	38656630	38656672	(12161796)	+	(GGCAGGC)n	Simple_repeat	1	45	(0)	2470029
40	2.5	0.0	0.0	chr22	38843958	38843998	(11974470)	+	(GGAGCC)n	Simple_repeat	1	41	(0)	2470391
2790	14.1	2.6	0.2	chr22	38852131	38852548	(11965920)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	2470411
315	26.9	9.6	2.1	chr22	38852549	38852587	(11965881)	+	MIRb	SINE/MIR	171	211	(57)	2470410
360	24.6	8.7	1.4	chr22	38852590	38852760	(11965708)	C	MIRc	SINE/MIR	(53)	209	37	2470412
1593	21.4	3.8	8.5	chr22	39473182	39473594	(11344874)	C	MSTD	LTR/ERVL-MaLR	(3)	393	1	2471722
2162	17.2	3.3	1.8	chr22	39611992	39612381	(11206087)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2472024
2105	12.0	0.7	1.0	chr22	40345621	40345928	(10472540)	C	AluSx	SINE/Alu	(4)	308	2	2473375
870	11.4	0.0	2.3	chr22	40346118	40346272	(10472196)	C	FLAM_C	SINE/Alu	(0)	143	1	2473376
187	32.8	1.6	0.0	chr22	40346274	40346334	(10472134)	C	MIR	SINE/MIR	(102)	160	99	2473377
376	26.0	3.7	0.9	chr22	41313415	41313519	(9504949)	C	MLT1L	LTR/ERVL-MaLR	(396)	214	107	2475629
341	22.5	12.9	7.8	chr22	41313568	41313733	(9504735)	C	L1ME3Cz	LINE/L1	(536)	356	180	2475622
2096	11.5	0.3	4.0	chr22	41313734	41314054	(9504414)	C	AluSx1	SINE/Alu	(3)	309	1	2475631
2303	9.9	0.0	0.0	chr22	41402826	41403119	(9415349)	+	AluSp	SINE/Alu	1	294	(19)	2475823
738	21.9	12.4	7.6	chr22	41403120	41403266	(9415202)	+	MLT1A0	LTR/ERVL-MaLR	159	307	(58)	2475822
2253	9.9	1.0	0.0	chr22	41403285	41403578	(9414890)	+	AluSq2	SINE/Alu	1	297	(16)	2475824
2236	11.9	0.3	0.0	chr22	41492492	41492794	(9325674)	+	AluSp	SINE/Alu	1	304	(9)	2476044
2393	8.7	0.0	1.6	chr22	41492795	41492966	(9325502)	+	AluSq	SINE/Alu	134	305	(8)	2476043
2156	16.3	3.8	1.6	chr22	41492967	41493286	(9325182)	C	MSTD	LTR/ERVL-MaLR	(63)	333	1	2476042
184	34.0	4.1	2.1	chr22	43143535	43143630	(7674838)	+	L2a	LINE/L2	3327	3424	(2)	2479694
12	24.6	3.6	3.5	chr22	43186826	43186881	(7631587)	+	(CCG)n	Simple_repeat	1	58	(0)	2479779
1913	17.1	9.0	1.5	chr22	43219077	43219475	(7598993)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	2479842
19	16.0	5.9	4.2	chr22	44820850	44820917	(5997551)	+	(CTGGCG)n	Simple_repeat	1	72	(0)	2482720
309	19.0	16.2	1.0	chr22	45014620	45014722	(5803746)	+	MER21C	LTR/ERVL	124	222	(716)	2483048
2093	16.6	5.8	2.6	chr22	45255411	45255793	(5562675)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2483547
15	10.0	2.9	2.9	chr22	45309983	45310022	(5508446)	+	(CGCTCT)n	Simple_repeat	1	40	(0)	2483679
360	27.0	13.9	2.0	chr22	45603107	45603257	(5215211)	+	MIRc	SINE/MIR	97	268	(0)	2484229
659	22.4	16.0	7.8	chr22	46178993	46179248	(4639220)	C	MLT1A	LTR/ERVL-MaLR	(93)	281	1	2485135
11	25.3	0.0	4.3	chr22	46737703	46737748	(4080720)	+	(CGCCCCG)n	Simple_repeat	1	46	(0)	2485974
15	17.7	2.6	0.0	chr22	46738006	46738043	(4080425)	+	G-rich	Low_complexity	1	39	(0)	2485975
28	3.3	0.0	0.0	chr22	46738231	46738261	(4080207)	+	(CGGGCGG)n	Simple_repeat	1	31	(0)	2485976
1481	19.1	8.8	7.2	chr22	46870580	46870968	(3947500)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2486161
1440	14.5	0.4	0.4	chr22	49511340	49511567	(1306901)	+	MLT1A0	LTR/ERVL-MaLR	17	244	(121)	2489464
227	24.4	0.0	2.2	chr22	49511559	49511604	(1306864)	+	MLT1A0	LTR/ERVL-MaLR	200	244	(121)	2489464
245	14.6	2.4	0.0	chr22	49511605	49511645	(1306823)	+	MLT1A0	LTR/ERVL-MaLR	208	249	(116)	2489464
292	13.3	0.0	2.2	chr22	49511633	49511678	(1306790)	+	MLT1A0	LTR/ERVL-MaLR	200	244	(121)	2489464
265	15.6	0.0	2.2	chr22	49511670	49511715	(1306753)	+	MLT1A0	LTR/ERVL-MaLR	200	244	(121)	2489464
265	15.6	0.0	2.2	chr22	49511890	49511935	(1306533)	+	MLT1A0	LTR/ERVL-MaLR	200	244	(121)	2489464
265	15.6	0.0	2.2	chr22	49511927	49511972	(1306496)	+	MLT1A0	LTR/ERVL-MaLR	200	244	(121)	2489464
310	14.8	1.8	1.8	chr22	49511964	49512018	(1306450)	+	MLT1A0	LTR/ERVL-MaLR	200	254	(111)	2489464
239	24.1	1.8	1.8	chr22	49512001	49512055	(1306413)	+	MLT1A0	LTR/ERVL-MaLR	200	254	(111)	2489464
713	21.6	2.4	1.2	chr22	49512038	49512201	(1306267)	+	MLT1A0	LTR/ERVL-MaLR	200	365	(0)	2489464
80	19.5	3.2	1.0	chr22	49605373	49605559	(1212909)	+	(CT)n	Simple_repeat	1	193	(0)	2489567
438	19.6	7.3	0.0	chr22	49605577	49605678	(1212790)	+	MSTD	LTR/ERVL-MaLR	197	306	(90)	2489568
540	31.9	10.0	2.5	chr22	49605679	49605955	(1212513)	+	L1ME4a	LINE/L1	5746	6045	(79)	2489565
366	32.3	5.4	2.2	chr22	49838626	49838856	(979612)	+	L1MDa	LINE/L1	136	374	(6166)	2489812
14	10.6	0.0	5.9	chr22	49838890	49838923	(979545)	+	(CCTCC)n	Simple_repeat	1	34	(0)	2489813
1495	19.4	2.5	0.3	chr22	49839108	49839427	(979041)	+	L1MDa	LINE/L1	936	1262	(5278)	2489812
848	16.9	0.0	0.0	chr22	49839490	49839625	(978843)	+	AluJb	SINE/Alu	177	312	(0)	2489814
1707	23.4	10.6	2.0	chr22	49866015	49866751	(951717)	C	L1M8	LINE/L1	(813)	1542	735	2489869
703	26.9	10.4	3.6	chr3	9355431	9355735	(188939824)	+	L2a	LINE/L2	2941	3268	(158)	2507044
1917	19.6	1.8	1.3	chr3	9355740	9356116	(188939443)	C	MSTD	LTR/ERVL-MaLR	(11)	417	1	2507045
16	11.6	5.8	5.5	chr3	9731434	9731485	(188564074)	+	G-rich	Low_complexity	1	55	(0)	2507837
30	26.0	0.0	2.3	chr3	9731741	9731827	(188563732)	+	(CGC)n	Simple_repeat	1	87	(0)	2507838
2516	16.2	1.8	0.0	chr3	10733893	10734281	(187561278)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2510017
3060	11.4	0.0	1.8	chr3	11127415	11127850	(187167709)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	2510802
1635	19.5	8.1	1.9	chr3	11264291	11264661	(187030898)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2511118
215	32.9	2.5	1.2	chr3	11570091	11570170	(186725389)	C	MIRc	SINE/MIR	(92)	176	96	2511683
12	26.1	0.0	0.0	chr3	13419716	13419752	(184875807)	+	G-rich	Low_complexity	1	37	(0)	2515200
16	6.7	0.0	8.1	chr3	13420012	13420048	(184875511)	+	(GGCCC)n	Simple_repeat	1	37	(0)	2515201
369	21.9	3.7	5.4	chr3	13693554	13693664	(184601895)	+	MLT1J	LTR/ERVL-MaLR	303	411	(101)	2515771
2878	11.9	0.2	0.0	chr3	13693706	13694115	(184601444)	C	MSTC	LTR/ERVL-MaLR	(0)	428	18	2515772
3264	10.3	0.5	0.0	chr3	14610241	14610666	(183684893)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	2517308
1933	20.9	3.3	1.6	chr3	14610667	14610774	(183684785)	C	L1ME1	LINE/L1	(359)	5820	5714	2517307
1482	19.3	11.1	1.9	chr3	16328971	16329329	(181966230)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2520323
1683	19.6	8.3	2.7	chr3	17436937	17437309	(180858250)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2521862
312	29.1	9.0	6.5	chr3	17742106	17742322	(180553237)	+	L1MDb	LINE/L1	537	759	(5650)	2522303
18	6.4	2.7	5.3	chr3	17742520	17742559	(180553000)	+	(TCC)n	Simple_repeat	1	38	(0)	2522304
3858	17.5	2.7	0.7	chr3	20060969	20061717	(178233842)	C	L1MB3	LINE/L1	(7)	6176	5412	2525608
2236	8.1	5.2	1.4	chr3	23605024	23605319	(174690240)	+	AluY	SINE/Alu	1	308	(3)	2530383
1215	17.4	17.5	2.3	chr3	23605320	23605581	(174689978)	+	MLT1A0	LTR/ERVL-MaLR	50	362	(3)	2530382
246	31.4	9.9	6.2	chr3	23625113	23625146	(174670413)	+	L2a	LINE/L2	3267	3298	(128)	2530420
1166	24.3	9.9	3.8	chr3	23625147	23625514	(174670045)	C	MSTD	LTR/ERVL-MaLR	(3)	393	1	2530421
5235	25.2	8.4	10.1	chr3	23625515	23627281	(174668278)	C	MSTD-int	LTR/ERVL-MaLR	(0)	1735	2	2530421
30	20.9	4.4	1.1	chr3	23805827	23805918	(174489641)	+	G-rich	Low_complexity	1	95	(0)	2530810
16	21.9	0.0	2.3	chr3	23806030	23806073	(174489486)	+	(CAG)n	Simple_repeat	1	44	(0)	2530811
21	23.0	5.9	2.2	chr3	23806111	23806195	(174489364)	+	(CCG)n	Simple_repeat	1	90	(0)	2530812
14	23.6	6.1	1.4	chr3	23806671	23806736	(174488823)	+	(CCCCTGC)n	Simple_repeat	1	70	(0)	2530813
18	22.6	8.3	1.1	chr3	23806890	23806973	(174488586)	+	(CCTGC)n	Simple_repeat	1	91	(0)	2530814
339	30.4	18.1	0.5	chr3	23948601	23948795	(174346764)	C	MIR	SINE/MIR	(25)	237	1	2531079
2342	9.9	0.3	0.0	chr3	23949084	23949385	(174346174)	+	AluSx1	SINE/Alu	1	303	(9)	2531080
1361	18.2	15.4	1.8	chr3	26684458	26684798	(171610761)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2535056
1820	17.6	8.6	13.0	chr3	27209772	27210100	(171085459)	+	LTR49	LTR/ERV1	1	280	(315)	2535737
2067	17.2	6.5	3.6	chr3	27210101	27210515	(171085044)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	2535738
1820	17.6	8.6	13.0	chr3	27210516	27210810	(171084749)	+	LTR49	LTR/ERV1	281	595	(0)	2535737
969	14.3	8.9	0.0	chr3	31859299	31859452	(166436107)	+	MER21B	LTR/ERVL	330	498	(370)	2542752
561	16.9	0.0	0.0	chr3	31859592	31859674	(166435885)	+	MSTD	LTR/ERVL-MaLR	219	301	(95)	2542753
1674	17.3	10.4	2.5	chr3	32211110	32211402	(166084157)	+	MSTD	LTR/ERVL-MaLR	1	325	(71)	2543438
2130	14.5	0.0	0.0	chr3	32211403	32211712	(166083847)	C	AluSx1	SINE/Alu	(2)	310	1	2543439
1530	20.6	4.8	7.3	chr3	32346391	32346772	(165948787)	C	MLT1A	LTR/ERVL-MaLR	(2)	372	1	2543703
12	26.8	0.0	0.0	chr3	32502546	32502585	(165792974)	+	(CCCGAG)n	Simple_repeat	1	40	(0)	2543989
684	19.4	8.2	0.0	chr3	32870849	32870982	(165424577)	C	AluJb	SINE/Alu	(47)	265	120	2544851
396	23.3	0.0	0.0	chr3	32870994	32871066	(165424493)	C	AluJr	SINE/Alu	(105)	207	135	2544852
789	13.8	13.1	0.7	chr3	33383761	33383913	(164911646)	C	MSTD	LTR/ERVL-MaLR	(0)	396	222	2545770
29	25.1	5.2	1.6	chr3	33440050	33440165	(164855394)	+	(GCC)n	Simple_repeat	1	122	(0)	2545866
2162	14.8	6.1	1.9	chr3	33829746	33830124	(164465435)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2546536
294	30.0	14.8	0.7	chr3	36381887	36382037	(161913522)	+	MIRb	SINE/MIR	74	249	(19)	2549823
1653	15.9	8.3	1.3	chr3	37166372	37166575	(161128984)	+	L1MB4	LINE/L1	5167	5397	(749)	2551088
1498	17.7	0.0	9.4	chr3	37166576	37166736	(161128823)	+	AluJb	SINE/Alu	2	133	(179)	2551090
2292	11.0	1.3	0.0	chr3	37166737	37167045	(161128514)	+	AluSp	SINE/Alu	1	313	(0)	2551091
13	12.6	0.0	3.6	chr3	37243577	37243604	(161051955)	+	(CAG)n	Simple_repeat	1	28	(0)	2551252
2365	9.4	0.0	0.0	chr3	38035958	38036254	(160259305)	+	AluSg	SINE/Alu	1	297	(13)	2552424
1936	18.4	0.0	0.3	chr3	38036318	38036627	(160258932)	+	AluJo	SINE/Alu	2	310	(2)	2552425
193	18.3	0.3	0.0	chr3	38084271	38084619	(160210940)	+	(TAG)n	Simple_repeat	1	350	(0)	2552504
1136	30.9	3.3	3.0	chr3	39180055	39180693	(159114866)	C	L2a	LINE/L2	(139)	3287	2639	2554101
484	33.0	9.3	3.4	chr3	39181187	39181516	(159114043)	+	L2a	LINE/L2	3068	3422	(4)	2554103
1382	30.8	17.6	3.2	chr3	39992237	39992992	(158302567)	+	L2	LINE/L2	265	1161	(2258)	2555273
1786	18.8	7.1	1.6	chr3	39992993	39993366	(158302193)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2555274
1382	30.8	17.6	3.2	chr3	39993367	39993725	(158301834)	+	L2	LINE/L2	1162	1574	(1845)	2555273
182	26.0	11.0	5.2	chr3	40260383	40260459	(158035100)	C	MIRc	SINE/MIR	(173)	95	14	2555658
1150	15.2	3.7	6.2	chr3	40260538	40260704	(158034855)	+	MER20	DNA/hAT-Charlie	1	161	(58)	2555659
2208	18.3	2.0	1.5	chr3	40260705	40261098	(158034461)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2555660
1777	19.7	0.8	7.6	chr3	41404524	41404946	(156890613)	+	MSTD	LTR/ERVL-MaLR	1	394	(2)	2557426
8782	21.2	5.7	8.0	chr3	41404947	41404967	(156890592)	C	L1MD2	LINE/L1	(3946)	2591	2571	2557423
5705	12.2	2.0	1.4	chr3	41404977	41406552	(156889007)	C	L1PA16	LINE/L1	(9)	6157	4560	2557427
264	30.9	7.7	8.1	chr3	42073377	42073608	(156221951)	+	MIRc	SINE/MIR	9	237	(31)	2558502
18	2.9	8.1	2.5	chr3	42654293	42654329	(155641230)	+	(GGGCTGG)n	Simple_repeat	1	40	(0)	2559443
637	19.2	10.8	10.8	chr3	42715634	42715758	(155579801)	C	MER3	DNA/hAT-Charlie	(65)	144	6	2559529
1349	16.5	4.0	0.8	chr3	42715763	42716007	(155579552)	+	MSTD	LTR/ERVL-MaLR	144	396	(0)	2559532
373	27.4	7.8	3.0	chr3	42772835	42773074	(155522485)	+	MIRc	SINE/MIR	2	259	(9)	2559634
2319	9.6	0.0	0.0	chr3	44728880	44729180	(153566379)	C	AluSx1	SINE/Alu	(11)	301	1	2562570
539	24.6	12.4	2.3	chr3	44729181	44729204	(153566355)	C	MIR	SINE/MIR	(224)	38	15	2562569
263	29.0	16.9	0.0	chr3	44729869	44730030	(153565529)	+	MIRc	SINE/MIR	24	218	(50)	2562571
4250	5.7	0.2	0.8	chr3	45448438	45448953	(152846606)	C	MER9a2	LTR/ERVK	(0)	513	1	2563865
2084	15.9	1.8	10.4	chr3	45448954	45449156	(152846403)	C	MSTD	LTR/ERVL-MaLR	(25)	371	196	2563864
2358	9.2	0.3	0.0	chr3	45449157	45449451	(152846108)	C	AluSp	SINE/Alu	(7)	306	11	2563866
402	33.3	6.2	3.0	chr3	45579522	45579722	(152715837)	+	MIRb	SINE/MIR	19	226	(42)	2564082
1716	18.1	12.1	2.2	chr3	45579832	45580187	(152715372)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2564083
605	16.7	10.0	3.6	chr3	45996067	45996234	(152299325)	+	MER33	DNA/hAT-Charlie	34	213	(111)	2564747
367	24.5	23.0	2.8	chr3	46361084	46361297	(151934262)	+	MLT1I	LTR/ERVL-MaLR	108	377	(34)	2565278
12758	9.6	0.7	0.9	chr3	46822657	46824230	(151471329)	C	THE1D-int	LTR/ERVL-MaLR	(51)	1580	1	2565979
1585	17.6	13.9	3.1	chr3	46826867	46827051	(151468508)	+	MSTD	LTR/ERVL-MaLR	1	225	(171)	2565985
34	3.0	0.0	0.0	chr3	46827052	46827085	(151468474)	+	(TC)n	Simple_repeat	1	34	(0)	2565986
1585	17.6	13.9	3.1	chr3	46827086	46827251	(151468308)	+	MSTD	LTR/ERVL-MaLR	226	396	(0)	2565985
3056	15.5	0.2	1.8	chr3	46827252	46827474	(151468085)	+	MER31A	LTR/ERV1	270	485	(0)	2565984
371	27.4	4.3	2.2	chr3	46880995	46881132	(151414427)	C	MIR3	SINE/MIR	(3)	205	65	2566053
12	18.7	0.0	3.0	chr3	46881433	46881465	(151414094)	+	G-rich	Low_complexity	1	33	(0)	2566054
13	34.0	0.0	0.0	chr3	46881686	46881741	(151413818)	+	G-rich	Low_complexity	1	56	(0)	2566055
15	26.8	0.0	0.0	chr3	47163892	47163936	(151131623)	+	(CTGCGG)n	Simple_repeat	1	45	(0)	2566541
36	0.0	2.4	2.4	chr3	47164013	47164053	(151131506)	+	(GCG)n	Simple_repeat	1	42	(0)	2566542
17	24.5	1.5	4.3	chr3	47164059	47164126	(151131433)	+	(TCCC)n	Simple_repeat	1	69	(0)	2566543
1233	20.6	7.4	3.2	chr3	48239687	48239956	(150055603)	C	LTR8	LTR/ERV1	(402)	325	44	2569006
3961	13.1	3.7	0.6	chr3	48239957	48240580	(150054979)	C	LTR9B	LTR/ERV1	(0)	644	1	2569011
221	33.1	3.2	5.7	chr3	49094659	49094850	(149200709)	+	L2b	LINE/L2	3015	3201	(174)	2570662
13	23.4	5.9	0.0	chr3	49411648	49411698	(148883861)	+	G-rich	Low_complexity	1	54	(0)	2571301
13	16.1	7.7	3.6	chr3	49411696	49411747	(148883812)	+	(GGC)n	Simple_repeat	1	56	(0)	2571302
2082	18.4	5.3	2.6	chr3	50073206	50073590	(148221969)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2572580
1928	19.1	4.3	0.5	chr3	52126582	52126959	(146168600)	C	MSTD	LTR/ERVL-MaLR	(0)	396	4	2575458
92	29.9	1.6	4.1	chr3	52410122	52410550	(145885009)	+	G-rich	Low_complexity	1	436	(0)	2575858
17	20.8	4.0	0.0	chr3	52685591	52685640	(145609919)	+	(CCGCC)n	Simple_repeat	1	52	(0)	2576289
28	27.3	4.0	2.3	chr3	52685752	52685875	(145609684)	+	(GCC)n	Simple_repeat	1	129	(0)	2576290
14	19.2	3.9	3.8	chr3	52705593	52705643	(145589916)	+	(GCCCC)n	Simple_repeat	1	53	(0)	2576322
1311	18.0	17.1	4.8	chr3	54260275	54260647	(144034912)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	2578830
2042	16.7	1.4	2.2	chr3	55308064	55308431	(142987128)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	2580245
2353	12.7	2.4	0.8	chr3	55505082	55505454	(142790105)	C	THE1D	LTR/ERVL-MaLR	(2)	379	1	2580552
1632	16.6	6.7	7.4	chr3	55967642	55968032	(142327527)	+	MSTD	LTR/ERVL-MaLR	1	388	(8)	2581308
1652	20.4	8.3	5.0	chr3	56234573	56234954	(142060605)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2581720
1635	18.6	10.3	10.1	chr3	57535214	57535532	(140760027)	+	MSTD	LTR/ERVL-MaLR	1	332	(64)	2584112
2619	7.9	0.3	0.0	chr3	57535533	57535837	(140759722)	C	AluSp	SINE/Alu	(3)	310	5	2584113
2283	8.9	0.3	2.9	chr3	57762711	57763023	(140532536)	C	AluSx	SINE/Alu	(7)	305	1	2584622
1883	18.2	1.0	0.3	chr3	57782471	57782772	(140512787)	C	AluJb	SINE/Alu	(8)	304	1	2584675
1530	18.2	1.4	1.4	chr3	57782773	57783051	(140512508)	+	MSTD	LTR/ERVL-MaLR	118	396	(0)	2584676
6358	23.9	7.5	4.0	chr3	57783054	57784716	(140510843)	+	MSTD-int	LTR/ERVL-MaLR	2	1728	(7)	2584676
1728	16.5	9.8	5.4	chr3	57784723	57785093	(140510466)	+	MSTD	LTR/ERVL-MaLR	1	389	(7)	2584676
297	28.8	8.3	4.3	chr3	58051588	58051725	(140243834)	C	MER5B	DNA/hAT-Charlie	(27)	151	8	2585279
1593	19.3	1.8	14.9	chr3	59637906	59638349	(138657210)	C	MSTD	LTR/ERVL-MaLR	(11)	385	1	2587796
1646	21.3	2.8	5.4	chr3	60812963	60813369	(137482190)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2589566
252	19.6	0.0	0.0	chr3	60813372	60813417	(137482142)	+	MamRep38	DNA/hAT	7	52	(243)	2589567
398	31.0	8.6	2.0	chr3	61721736	61721985	(136573574)	C	MLT1L	LTR/ERVL-MaLR	(0)	610	343	2591129
1609	20.6	8.1	7.8	chr3	61722030	61722424	(136573135)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2591130
341	39.9	4.9	9.0	chr3	63473425	63473826	(134821733)	C	L2b	LINE/L2	(9)	3366	2982	2594097
346	25.3	4.2	0.0	chr3	63882201	63882291	(134413268)	+	MIR	SINE/MIR	85	179	(83)	2594841
1914	15.0	0.7	0.7	chr3	63882383	63882675	(134412884)	C	AluSx	SINE/Alu	(9)	303	11	2594842
745	29.3	9.9	5.0	chr3	64406752	64407290	(133888269)	+	L2b	LINE/L2	2798	3373	(2)	2595679
299	32.2	6.3	7.9	chr3	64697364	64698224	(133597335)	+	L1M5	LINE/L1	4333	5180	(966)	2596163
1681	19.3	8.6	2.4	chr3	64698225	64698595	(133596964)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2596164
299	32.2	6.3	7.9	chr3	64698596	64698645	(133596914)	+	L1M5	LINE/L1	5181	5229	(917)	2596163
1083	16.4	3.0	0.0	chr3	66983111	66983305	(131312254)	C	MER20	DNA/hAT-Charlie	(18)	201	1	2600187
2692	15.5	2.6	0.2	chr3	67621474	67621888	(130673671)	+	MSTC	LTR/ERVL-MaLR	4	428	(0)	2601100
6244	15.6	1.4	1.0	chr3	71735907	71736992	(126558567)	+	L1MC1	LINE/L1	5246	6333	(0)	2607724
70	9.3	2.7	2.7	chr3	73004845	73004990	(125290569)	+	(GT)n	Simple_repeat	1	150	(0)	2610413
1724	11.6	11.7	0.0	chr3	73004991	73005240	(125290319)	C	AluSg	SINE/Alu	(27)	283	1	2610414
2256	15.3	4.1	2.0	chr3	73879207	73879612	(124415947)	+	MSTC	LTR/ERVL-MaLR	1	415	(13)	2611921
320	21.9	0.0	9.6	chr3	75668819	75668954	(122626605)	C	LSAU	Satellite	(374)	124	2	2614560
1747	18.5	1.8	6.7	chr3	77357156	77357572	(120937987)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2616771
620	27.8	7.5	3.2	chr3	77357573	77357714	(120937845)	C	MIRb	SINE/MIR	(106)	162	8	2616770
625	15.7	1.0	0.0	chr3	85149167	85149268	(113146291)	+	MSTD	LTR/ERVL-MaLR	1	103	(325)	2626662
821	17.4	1.3	1.3	chr3	85149263	85149419	(113146140)	+	MSTD	LTR/ERVL-MaLR	240	396	(0)	2626662
1182	19.8	20.7	1.6	chr3	85872919	85873237	(112422322)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2627585
1810	20.6	0.3	2.4	chr3	87007642	87008014	(111287545)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	2628997
12	12.0	3.7	0.0	chr3	88149520	88149546	(110146013)	+	(TAATT)n	Simple_repeat	1	28	(0)	2630438
1410	17.6	17.1	1.8	chr3	88596737	88597077	(109698482)	+	MLT1A1	LTR/ERVL-MaLR	1	404	(4)	2631033
3724	24.9	5.5	8.2	chr3	88597082	88598321	(109697238)	+	MLT1A1-int	LTR/ERVL-MaLR	1	1206	(529)	2631033
1886	22.1	1.5	1.0	chr3	94150385	94150778	(104144781)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2633925
1296	22.9	11.6	6.2	chr3	94336772	94337144	(103958415)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2634179
6222	18.2	1.0	0.5	chr3	95742079	95743167	(102552392)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	537	2635865
17	18.6	0.0	7.0	chr3	98902062	98902118	(99393441)	+	(CCTCGCT)n	Simple_repeat	1	57	(0)	2639607
20	8.4	5.3	0.0	chr3	99876079	99876116	(98419443)	+	(GCCGGG)n	Simple_repeat	1	40	(0)	2640829
18	29.8	0.0	0.0	chr3	99876246	99876302	(98419257)	+	(GCG)n	Simple_repeat	1	57	(0)	2640830
463	25.0	3.0	1.5	chr3	100988869	100988973	(97306586)	+	MIR	SINE/MIR	66	170	(92)	2642418
1558	15.4	18.9	0.9	chr3	100988974	100989307	(97306252)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	2642419
463	25.0	3.0	1.5	chr3	100989308	100989331	(97306228)	+	MIR	SINE/MIR	171	196	(66)	2642418
29	0.0	0.0	0.0	chr3	101513214	101513245	(96782314)	+	(A)n	Simple_repeat	1	32	(0)	2643091
941	21.7	11.5	1.6	chr3	101846026	101846283	(96449276)	C	MLT1F	LTR/ERVL-MaLR	(73)	475	189	2643697
40	2.5	0.0	0.0	chr3	101849216	101849256	(96446303)	+	(GGAGGCG)n	Simple_repeat	1	41	(0)	2643700
20	9.8	6.8	0.0	chr3	101849316	101849359	(96446200)	+	G-rich	Low_complexity	1	47	(0)	2643701
13	22.6	0.0	2.6	chr3	101849741	101849778	(96445781)	+	(CGC)n	Simple_repeat	1	38	(0)	2643702
1570	25.7	1.8	1.0	chr3	102553453	102553845	(95741714)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2644682
306	36.0	7.7	3.4	chr3	103435731	103435966	(94859593)	C	MIRb	SINE/MIR	(15)	253	7	2645789
1072	21.7	9.4	2.6	chr3	104231163	104231529	(94064030)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	2646811
11	18.1	2.4	4.8	chr3	105366741	105366781	(92928778)	+	G-rich	Low_complexity	1	42	(0)	2648180
20	28.7	2.8	0.0	chr3	105366924	105366995	(92928564)	+	(CCG)n	Simple_repeat	1	74	(0)	2648181
1314	21.2	14.4	2.3	chr3	108231067	108231413	(90064146)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2652020
1907	17.1	9.8	0.8	chr3	109013717	109014076	(89281483)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2653129
1534	21.7	2.0	8.1	chr3	111353317	111353738	(86941821)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2656429
1101	19.0	9.7	3.3	chr3	112981623	112981987	(85313572)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	2658539
480	34.0	4.3	2.4	chr3	112982051	112982300	(85313259)	C	L1MEg	LINE/L1	(5811)	273	19	2658538
381	29.4	6.1	0.5	chr3	114476073	114476257	(83819302)	C	L1ME4c	LINE/L1	(159)	671	476	2660804
582	20.8	0.8	0.0	chr3	114476275	114476394	(83819165)	+	L1MC5	LINE/L1	9181	9301	(3)	2660805
2199	17.7	1.5	1.5	chr3	114476404	114476798	(83818761)	C	MSTD	LTR/ERVL-MaLR	(0)	396	2	2660806
1600	16.1	16.2	1.7	chr3	118873614	118873960	(79421599)	+	MLT1A1	LTR/ERVL-MaLR	1	407	(1)	2666808
13	14.1	3.0	2.9	chr3	119294093	119294130	(79001429)	+	(CGG)n	Simple_repeat	1	38	(0)	2667323
18	18.4	2.3	0.0	chr3	119353062	119353104	(78942455)	+	(TCATA)n	Simple_repeat	1	44	(0)	2667435
23	27.1	0.0	0.0	chr3	119463509	119463574	(78831985)	+	(GCCAGA)n	Simple_repeat	1	66	(0)	2667614
225	29.5	12.3	2.1	chr3	119463821	119464016	(78831543)	C	MIRc	SINE/MIR	(23)	245	19	2667615
190	14.3	23.3	0.0	chr3	119464036	119464091	(78831468)	C	L2c	LINE/L2	(43)	3344	3272	2667616
622	24.5	9.2	2.5	chr3	120595854	120596055	(77699504)	C	MIRc	SINE/MIR	(39)	229	12	2669375
718	29.2	2.6	1.7	chr3	120596707	120596936	(77698623)	+	MIR	SINE/MIR	21	252	(10)	2669376
13	5.3	0.0	0.0	chr3	120908373	120908392	(77387167)	+	(CGC)n	Simple_repeat	1	20	(0)	2669849
24	9.5	0.0	0.0	chr3	120908416	120908449	(77387110)	+	(TG)n	Simple_repeat	1	34	(0)	2669850
25	10.6	0.0	0.0	chr3	120908449	120908489	(77387070)	+	(GAGAGA)n	Simple_repeat	1	41	(0)	2669851
13	15.9	1.4	12.3	chr3	120908723	120908794	(77386765)	+	(GCGGCG)n	Simple_repeat	1	73	(0)	2669852
13	28.8	0.0	3.5	chr3	121645460	121645517	(76650042)	+	A-rich	Low_complexity	1	58	(0)	2670806
32	7.3	0.0	0.0	chr3	125519939	125519982	(72775577)	+	(GCCCA)n	Simple_repeat	1	44	(0)	2677205
14	22.1	0.0	0.0	chr3	125520413	125520449	(72775110)	+	GA-rich	Low_complexity	1	37	(0)	2677206
2497	7.4	1.0	0.0	chr3	125520647	125520816	(72774743)	C	AluSq	SINE/Alu	(12)	301	132	2677207
2697	15.6	0.5	2.5	chr3	126543989	126544422	(71751137)	+	MSTC	LTR/ERVL-MaLR	1	425	(3)	2678758
373	17.1	7.3	0.0	chr3	127056838	127056913	(71238646)	C	LTR45C	LTR/ERV1	(0)	539	458	2679439
365	7.1	11.1	0.0	chr3	127056918	127056973	(71238586)	C	LTR45C	LTR/ERV1	(476)	63	1	2679440
1276	25.3	11.9	5.5	chr3	127057029	127057816	(71237743)	C	HAL1	LINE/L1	(797)	1710	797	2679437
2387	13.3	7.0	2.7	chr3	127441713	127442121	(70853438)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	2680043
541	26.2	1.7	2.8	chr3	127442122	127442147	(70853412)	+	L1MC4a	LINE/L1	5913	5937	(1945)	2680042
2450	7.1	0.0	0.0	chr3	127597811	127598105	(70697454)	C	AluSg	SINE/Alu	(15)	295	1	2680338
225	26.3	6.6	0.0	chr3	127598703	127598759	(70696800)	C	L2b	LINE/L2	(1)	3386	3326	2680339
206	25.8	2.2	13.6	chr3	127685246	127685348	(70610211)	+	L2b	LINE/L2	3264	3354	(21)	2680504
506	26.8	2.5	0.0	chr3	127685571	127685727	(70609832)	C	MER45A	DNA/hAT-Tip100	(17)	161	1	2680505
660	27.7	2.1	1.2	chr3	127685771	127687862	(70607697)	+	(CATT)n	Simple_repeat	1	2108	(0)	2680506
28	2.6	5.1	0.0	chr3	127822914	127822952	(70472607)	+	(CGCGCGCACA)n	Simple_repeat	1	41	(0)	2680731
16	5.3	0.0	0.0	chr3	127822961	127822980	(70472579)	+	(CA)n	Simple_repeat	1	20	(0)	2680732
18	20.0	4.8	5.8	chr3	127823228	127823310	(70472249)	+	(CGG)n	Simple_repeat	1	87	(0)	2680733
66	35.3	2.3	1.4	chr3	127823477	127823821	(70471738)	+	(AC)n	Simple_repeat	1	353	(0)	2680734
331	19.8	5.7	5.5	chr3	128236503	128236675	(70058884)	C	L1ME3G	LINE/L1	(674)	218	103	2681433
535	29.6	6.5	13.6	chr3	128236697	128237048	(70058511)	+	L2a	LINE/L2	3034	3406	(20)	2681437
666	32.7	4.8	4.8	chr3	128237055	128237488	(70058071)	C	L1M5	LINE/L1	(794)	5352	4919	2681438
1358	19.1	15.0	4.6	chr3	128291270	128291620	(70003939)	+	MSTD	LTR/ERVL-MaLR	3	396	(0)	2681518
6814	22.5	6.3	7.0	chr3	128291621	128293212	(70002347)	C	L1MC3	LINE/L1	(1845)	4301	2710	2681511
14138	15.9	3.5	4.9	chr3	128857767	128859679	(69435880)	C	HERV3-int	LTR/ERV1	(6538)	1888	2	2682563
2833	13.0	5.8	1.5	chr3	128859680	128860156	(69435403)	C	LTR4	LTR/ERV1	(0)	596	98	2682563
190	30.8	14.7	5.0	chr3	129026766	129026905	(69268654)	C	L3	LINE/CR1	(601)	3498	3343	2682900
245	27.7	2.6	7.4	chr3	129026923	129027043	(69268516)	C	MLT1L	LTR/ERVL-MaLR	(81)	529	415	2682901
19	25.0	0.0	0.0	chr3	129160917	129160965	(69134594)	+	(CGCC)n	Simple_repeat	1	49	(0)	2683173
11	24.2	5.5	1.7	chr3	129161326	129161380	(69134179)	+	A-rich	Low_complexity	1	58	(0)	2683174
2205	8.2	0.0	2.3	chr3	129328170	129328474	(68967085)	+	AluSc8	SINE/Alu	1	298	(13)	2683551
707	31.8	7.1	5.1	chr3	129328475	129328656	(68966903)	+	L1MC4	LINE/L1	7720	7898	(144)	2683549
2108	16.0	1.3	1.8	chr3	131330735	131331117	(66964442)	C	MSTD	LTR/ERVL-MaLR	(5)	391	11	2686748
13	16.3	0.0	5.3	chr3	132722182	132722219	(65573340)	+	(CCCGGC)n	Simple_repeat	1	38	(0)	2688838
1379	19.4	10.6	4.2	chr3	133848458	133848862	(64446697)	C	MSTD	LTR/ERVL-MaLR	(0)	408	1	2690569
17	21.5	0.0	3.9	chr3	134374582	134374633	(63920926)	+	(CCTCCGC)n	Simple_repeat	1	52	(0)	2691350
2291	15.5	0.8	2.2	chr3	135862834	135863235	(62432324)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2693444
2919	12.4	0.2	2.5	chr3	138037427	138037858	(60257701)	C	MSTC	LTR/ERVL-MaLR	(3)	425	4	2696857
13	11.6	2.2	8.7	chr3	142225686	142225730	(56069829)	+	(CAGCCGC)n	Simple_repeat	1	46	(0)	2703768
2437	5.8	0.3	0.0	chr3	142225760	142226051	(56069508)	C	AluSg	SINE/Alu	(16)	294	2	2703769
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
11	15.3	11.4	0.0	chr3	142723949	142723992	(55571567)	+	(CCGCAGGCC)n	Simple_repeat	1	49	(0)	2704607
19	15.0	0.0	0.0	chr3	142724476	142724512	(55571047)	+	G-rich	Low_complexity	1	37	(0)	2704608
17	3.2	2.5	9.8	chr3	142724600	142724639	(55570920)	+	(CCT)n	Simple_repeat	1	41	(0)	2704609
351	32.8	1.5	2.2	chr3	148493130	148493266	(49802293)	C	L1ME4a	LINE/L1	(436)	5688	5553	2712187
1060	17.8	3.8	0.3	chr3	148493267	148493601	(49801958)	+	MSTD	LTR/ERVL-MaLR	1	627	(0)	2712188
36	16.3	3.1	4.0	chr3	149970880	149970975	(48324584)	+	(GCG)n	Simple_repeat	1	99	(0)	2714495
13	9.6	0.0	0.0	chr3	149971187	149971209	(48324350)	+	(GCGT)n	Simple_repeat	1	23	(0)	2714496
358	30.5	2.6	8.5	chr3	150157455	150157500	(48138059)	C	MIRb	SINE/MIR	(107)	161	112	2714773
2287	15.8	2.5	2.5	chr3	150157501	150157896	(48137663)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2714780
14	27.2	1.6	3.2	chr3	150408713	150408773	(47886786)	+	(CCGC)n	Simple_repeat	1	62	(0)	2715187
18	23.7	0.0	2.0	chr3	150408885	150408940	(47886619)	+	(CCT)n	Simple_repeat	1	54	(0)	2715188
14	22.2	6.1	2.9	chr3	150408941	150408948	(47886611)	+	(CACCGC)n	Simple_repeat	3	70	(0)	2715189
198	36.2	1.9	6.2	chr3	150612933	150613044	(47682515)	C	X6A_LINE	LINE/CR1	(406)	674	568	2715525
884	14.8	3.0	2.4	chr3	150613090	150613255	(47682304)	C	MSTD	LTR/ERVL-MaLR	(11)	385	219	2715526
382	19.5	3.3	0.0	chr3	150613280	150613366	(47682193)	C	MSTD	LTR/ERVL-MaLR	(303)	93	4	2715526
1821	18.9	7.6	0.3	chr3	152739822	152740188	(45555371)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2718609
1780	19.5	9.3	0.6	chr3	153856540	153856900	(44438659)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2720353
533	30.5	6.0	2.6	chr3	153856901	153857203	(44438356)	C	LTR79	LTR/ERVL	(97)	430	117	2720354
2442	23.0	13.0	2.4	chr3	154268741	154269820	(44025739)	+	L1MDa	LINE/L1	3018	4245	(2292)	2720943
948	16.0	22.7	4.1	chr3	154269821	154270165	(44025394)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	2720945
2442	23.0	13.0	2.4	chr3	154270166	154270248	(44025311)	+	L1MDa	LINE/L1	4246	4323	(2214)	2720943
13	5.3	0.0	0.0	chr3	156826640	156826659	(41468900)	+	(CCT)n	Simple_repeat	1	20	(0)	2724616
197	28.6	7.1	4.2	chr3	157956935	157957029	(40338530)	+	L2a	LINE/L2	3062	3159	(267)	2726184
195	36.0	8.6	2.1	chr3	157957105	157957246	(40338313)	+	L2a	LINE/L2	3183	3334	(53)	2726184
1491	16.8	7.6	12.9	chr3	158398214	158398630	(39896929)	C	MLT1A1	LTR/ERVL-MaLR	(15)	393	1	2726741
1695	15.7	14.7	1.2	chr3	158770795	158771136	(39524423)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2727274
1708	17.0	1.4	2.8	chr3	160437070	160437358	(37858201)	+	AluJb	SINE/Alu	3	287	(25)	2729775
1849	20.7	3.8	0.0	chr3	162942012	162942388	(35353171)	+	MSTD	LTR/ERVL-MaLR	1	392	(4)	2733212
1404	20.7	1.9	0.3	chr3	162942396	162942700	(35352859)	+	MSTD-int	LTR/ERVL-MaLR	4	313	(1422)	2733212
929	22.3	20.3	4.3	chr3	164383148	164383475	(33912084)	+	MLT1A1	LTR/ERVL-MaLR	3	396	(12)	2734835
11113	10.4	0.4	0.4	chr3	164648863	164650441	(33645118)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2735188
1070	21.9	8.2	5.8	chr3	166634410	166634754	(31660805)	+	MLT1A0	LTR/ERVL-MaLR	1	354	(11)	2737740
791	17.2	0.0	1.6	chr3	168967631	168967752	(29327807)	+	FLAM_C	SINE/Alu	2	121	(22)	2740762
1430	22.3	8.6	3.9	chr3	168967753	168968129	(29327430)	C	MSTC	LTR/ERVL-MaLR	(39)	389	1	2740761
2322	9.8	0.7	0.3	chr3	169919894	169920200	(28375359)	+	AluSp	SINE/Alu	2	309	(4)	2742049
1333	20.8	5.9	10.3	chr3	169920201	169920565	(28374994)	C	MLT1B	LTR/ERVL-MaLR	(40)	350	1	2742048
15	20.3	4.4	0.0	chr3	170357245	170357255	(27938304)	+	GA-rich	Low_complexity	1	46	(0)	2742886
12	18.4	0.0	3.0	chr3	170357256	170357288	(27938271)	+	G-rich	Low_complexity	1	33	(0)	2742887
18	16.9	4.2	2.0	chr3	170357487	170357534	(27938025)	+	(GGC)n	Simple_repeat	1	50	(0)	2742888
13	15.0	0.0	8.9	chr3	170357539	170357583	(27937976)	+	(CTCCC)n	Simple_repeat	1	45	(0)	2742889
12	15.8	0.0	3.3	chr3	170357586	170357615	(27937944)	+	(GGC)n	Simple_repeat	1	30	(0)	2742890
28	20.9	1.3	2.6	chr3	170357707	170357805	(27937754)	+	(GGC)n	Simple_repeat	1	97	(0)	2742891
2439	8.2	0.0	0.0	chr3	172065052	172065344	(26230215)	+	AluSg	SINE/Alu	1	293	(17)	2745566
1893	21.6	1.8	1.5	chr3	175122763	175123157	(23172402)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2749946
2723	9.8	9.1	2.0	chr3	177489489	177489885	(20805674)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	2753351
1952	19.9	2.8	5.0	chr3	177571208	177571645	(20723914)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	2753474
1370	24.5	4.0	3.8	chr3	179479890	179480284	(18815275)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2756295
2343	9.4	0.3	0.0	chr3	183013491	183013787	(15281772)	C	AluSc5	SINE/Alu	(10)	299	2	2761935
1107	17.0	21.5	6.4	chr3	183013869	183014227	(15281332)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	2761936
1597	17.5	12.9	2.0	chr3	186815534	186815883	(11479676)	+	MSTD	LTR/ERVL-MaLR	1	394	(2)	2769033
1805	19.1	5.8	1.1	chr3	188034885	188035259	(10260300)	+	MSTD	LTR/ERVL-MaLR	1	394	(2)	2771141
3398	20.2	6.2	3.6	chr3	188035260	188036013	(10259546)	+	L1MB8	LINE/L1	5399	6172	(6)	2771139
2224	10.1	0.7	1.7	chr3	194073746	194074042	(4221517)	C	AluSx	SINE/Alu	(18)	294	1	2780490
1576	17.3	8.2	2.4	chr3	194074048	194074379	(4221180)	C	MSTD	LTR/ERVL-MaLR	(43)	353	1	2780487
13	0.0	5.0	0.0	chr3	194176642	194176661	(4118898)	+	(TAA)n	Simple_repeat	1	21	(0)	2780679
617	25.6	1.3	0.0	chr3	194176778	194176933	(4118626)	+	UCON29	DNA/PiggyBac?	255	412	(27)	2780680
2628	17.3	11.3	1.5	chr3	195205108	195205580	(3089979)	+	L1MD1	LINE/L1	5565	6100	(142)	2782539
2146	14.4	0.0	0.0	chr3	195205581	195205892	(3089667)	+	AluSx1	SINE/Alu	1	312	(0)	2782540
13	12.5	0.0	0.0	chr3	196739832	196739857	(1555702)	+	(GCCCC)n	Simple_repeat	1	26	(0)	2785665
17	9.7	0.0	5.4	chr3	196740031	196740067	(1555492)	+	(TCCCC)n	Simple_repeat	1	37	(0)	2785666
1087	11.8	3.0	0.0	chr3	196970281	196970441	(1325118)	C	AluJb	SINE/Alu	(11)	301	136	2786136
1741	23.0	11.0	3.2	chr3	197801709	197802234	(493325)	C	MLT1E2	LTR/ERVL-MaLR	(0)	627	56	2787560
796	15.2	2.7	2.7	chr3	197802277	197802425	(493134)	C	MSTD	LTR/ERVL-MaLR	(0)	396	248	2787561
1827	12.0	8.8	0.0	chr3	197802426	197802776	(492783)	C	L1M2	LINE/L1	(2400)	3743	3359	2787562
916	26.7	9.2	4.1	chr4	2995688	2996078	(187218477)	C	LTR56	LTR/ERV1	(24)	421	9	2792558
312	14.5	8.8	0.0	chr4	2996096	2996157	(187218398)	C	MLT1A1	LTR/ERVL-MaLR	(114)	282	215	2792554
465	24.9	6.1	6.6	chr4	2996189	2996272	(187218283)	C	MLT1A1	LTR/ERVL-MaLR	(228)	180	98	2792554
2316	10.1	0.0	0.0	chr4	2996273	2996568	(187217987)	+	AluSx1	SINE/Alu	1	296	(16)	2792559
619	20.6	6.0	5.1	chr4	3552153	3552433	(186662122)	+	MSTD	LTR/ERVL-MaLR	2	328	(68)	2793288
2307	11.9	0.0	0.0	chr4	3552434	3552744	(186661811)	C	AluSx1	SINE/Alu	(1)	311	1	2793289
1847	18.8	5.5	9.2	chr4	4339395	4339885	(185874670)	C	MER65D	LTR/ERV1	(1)	472	1	2794541
852	13.9	1.5	0.0	chr4	4341807	4341935	(185872620)	+	FLAM_C	SINE/Alu	3	133	(10)	2794547
2382	10.9	5.6	6.7	chr4	4341936	4342312	(185872243)	+	MSTC	LTR/ERVL-MaLR	53	428	(0)	2794546
1562	19.2	7.8	6.4	chr4	5015963	5016352	(185198203)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2795864
271	32.9	5.3	3.6	chr4	5016353	5016443	(185198112)	C	MIRb	SINE/MIR	(165)	103	3	2795863
270	20.3	7.1	4.8	chr4	5050923	5051005	(185163550)	+	MIR3	SINE/MIR	87	171	(37)	2795940
1896	20.1	2.0	1.5	chr4	5834222	5834615	(184379940)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2797261
1155	19.7	7.5	6.5	chr4	5848624	5848993	(184365562)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	2797290
330	27.9	14.3	3.1	chr4	5848994	5849150	(184365405)	C	MIRb	SINE/MIR	(66)	202	22	2797289
1904	15.6	0.3	0.7	chr4	6574364	6574658	(183639897)	+	AluJb	SINE/Alu	2	295	(17)	2798641
18	20.2	1.6	4.8	chr4	6575106	6575167	(183639388)	+	(CCCCGC)n	Simple_repeat	1	63	(0)	2798642
14	22.2	2.3	2.2	chr4	6575216	6575259	(183639296)	+	(GCT)n	Simple_repeat	1	45	(0)	2798643
3813	18.1	4.9	1.6	chr4	8528568	8528949	(181685606)	C	L1MB7	LINE/L1	(392)	5786	5379	2801884
1527	24.4	4.1	2.2	chr4	8528950	8529305	(181685250)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	3	2801887
3813	19.7	12.6	11.5	chr4	8529306	8529843	(181684712)	C	L1MB7	LINE/L1	(768)	5378	4714	2801884
14	27.0	4.3	2.7	chr4	8871369	8871438	(181343117)	+	(CCG)n	Simple_repeat	1	73	(0)	2802393
23	27.1	4.5	3.6	chr4	8871407	8871538	(181343017)	+	(GTCGCC)n	Simple_repeat	1	138	(0)	2802394
19	19.9	0.0	5.3	chr4	8871734	8871790	(181342765)	+	G-rich	Low_complexity	1	57	(0)	2802395
17	21.1	4.7	3.0	chr4	9691684	9691747	(180522808)	+	(GCCCCA)n	Simple_repeat	1	67	(0)	2803437
233	22.6	0.6	5.8	chr4	9830928	9831017	(180383538)	C	MIRc	SINE/MIR	(114)	154	70	2803715
2207	26.1	4.5	3.4	chr4	11727421	11728186	(178486369)	+	L1ME2	LINE/L1	5371	6145	(19)	2806700
990	26.7	6.9	6.9	chr4	11728188	11728577	(178485978)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	2806701
5463	25.5	8.2	3.4	chr4	13106510	13108156	(177106399)	C	MSTD-int	LTR/ERVL-MaLR	(0)	1735	2	2808808
1737	21.5	3.5	2.0	chr4	13108159	13108548	(177106007)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2808808
1641	22.9	4.0	0.5	chr4	13138982	13139363	(177075192)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2808853
251	30.4	8.8	5.2	chr4	13139414	13139566	(177074989)	C	MIRc	SINE/MIR	(90)	178	20	2808854
44	27.4	1.6	0.0	chr4	13627443	13627570	(176586985)	+	(CGG)n	Simple_repeat	1	130	(0)	2809599
1024	20.0	8.0	3.0	chr4	13829432	13829801	(176384754)	+	MSTC	LTR/ERVL-MaLR	3	428	(0)	2809924
1720	22.5	1.3	1.5	chr4	15462836	15463228	(174751327)	C	MSTD	LTR/ERVL-MaLR	(4)	392	1	2812705
1801	19.6	10.1	0.8	chr4	15836105	15836474	(174378081)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	2813317
9889	9.6	12.1	4.2	chr4	16283512	16284960	(173929595)	+	THE1B-int	LTR/ERVL-MaLR	2	1580	(0)	2814069
1314	22.9	5.6	9.7	chr4	17533224	17533341	(172681214)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	389	2816401
1164	19.5	23.5	0.0	chr4	17533342	17533644	(172680911)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2816402
203	31.2	0.0	5.9	chr4	18795292	18795359	(171419196)	C	L2a	LINE/L2	(13)	3413	3350	2818483
1117	20.3	16.1	3.0	chr4	18795370	18795739	(171418816)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	2818484
1801	19.7	7.8	3.7	chr4	25455322	25455700	(164758855)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2828938
1898	16.9	10.3	0.6	chr4	26149458	26149814	(164064741)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2830473
2442	9.1	0.3	0.0	chr4	26335172	26335479	(163879076)	C	AluSc8	SINE/Alu	(2)	309	1	2830875
2346	8.8	0.0	1.3	chr4	26335615	26335921	(163878634)	C	AluY	SINE/Alu	(7)	304	2	2830876
363	27.6	1.0	1.0	chr4	26470127	26470225	(163744330)	C	MLT1B	LTR/ERVL-MaLR	(384)	226	128	2831103
2012	16.5	6.6	1.1	chr4	26470259	26470632	(163743923)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2831107
900	24.5	5.0	2.8	chr4	30846135	30846183	(159368372)	C	MER20	DNA/hAT-Charlie	(0)	219	171	2837260
1769	18.2	8.3	2.7	chr4	30846184	30846556	(159367999)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2837261
900	24.5	5.0	2.8	chr4	30846557	30846720	(159367835)	C	MER20	DNA/hAT-Charlie	(49)	170	1	2837260
326	37.3	6.9	1.3	chr4	37054560	37054790	(153159765)	+	L2b	LINE/L2	2737	2981	(438)	2845584
8345	17.1	6.5	3.8	chr4	37730406	37731032	(152483523)	+	L1MC3	LINE/L1	5938	6586	(1199)	2846569
1528	16.8	15.4	1.1	chr4	37731033	37731381	(152483174)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	2846570
448	19.6	1.0	1.9	chr4	47292520	47292623	(142921932)	C	LTR37-int	LTR/ERV1	(1326)	2734	2632	2862026
1278	23.9	5.8	5.0	chr4	47292626	47292982	(142921573)	C	MSTD	LTR/ERVL-MaLR	(2)	394	35	2862027
863	17.6	1.2	0.2	chr4	49090455	49091234	(141123321)	+	ALR/Alpha	Satellite/centr	1	788	(0)	2864886
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
765	23.2	4.1	11.8	chr4	49510094	49510415	(140704140)	C	L1MB8	LINE/L1	(43)	6135	5840	2865174
69	6.2	0.0	0.0	chr4	49510486	49510569	(140703986)	+	(TCCT)n	Simple_repeat	1	84	(0)	2865175
304	22.8	0.0	0.0	chr4	49510858	49510914	(140703641)	C	MER47C	DNA/TcMar-Tigger	(28)	69	13	2865176
1052	23.2	11.7	1.2	chr4	49511786	49512246	(140702309)	C	MER21A	LTR/ERVL	(132)	799	200	2865179
1130	13.8	0.3	0.1	chr4	49514156	49515857	(140698698)	+	ACRO1	Satellite/acro	1	1705	(0)	2865184
406	18.9	2.2	0.5	chr4	49573746	49573848	(140640707)	+	MSTA	LTR/ERVL-MaLR	4	113	(262)	2865274
271	21.9	1.9	0.4	chr4	49573937	49574021	(140640534)	+	THE1D-int	LTR/ERVL-MaLR	959	1064	(587)	2865275
839	22.6	15.8	2.1	chr4	49573984	49574223	(140640332)	C	THE1D-int	LTR/ERVL-MaLR	(398)	1233	955	2865276
867	26.6	5.5	4.6	chr4	49574228	49574534	(140640021)	+	MSTA	LTR/ERVL-MaLR	76	385	(43)	2865274
285	26.1	0.0	1.8	chr4	49577533	49577634	(140636921)	C	HSAT5	Satellite	(1)	100	1	2865283
639	7.7	0.0	0.6	chr4	49577855	49577952	(140636603)	C	HSAT5	Satellite	(3)	97	1	2865284
15	22.3	0.0	6.8	chr4	51844404	51844462	(138370093)	+	(GCGCGG)n	Simple_repeat	1	59	(0)	2865386
229	17.4	15.8	0.0	chr4	53774738	53774806	(136439749)	+	MSTD	LTR/ERVL-MaLR	1	82	(346)	2868205
1686	19.5	2.4	0.0	chr4	53774822	53775144	(136439411)	+	MSTD	LTR/ERVL-MaLR	66	396	(0)	2868205
12	27.7	0.0	0.0	chr4	54064238	54064276	(136150279)	+	(CTC)n	Simple_repeat	1	39	(0)	2868660
14	9.6	0.0	0.0	chr4	54064473	54064495	(136150060)	+	(CCG)n	Simple_repeat	1	23	(0)	2868661
34	24.0	0.0	0.0	chr4	54064666	54064748	(136149807)	+	G-rich	Low_complexity	1	83	(0)	2868662
1547	21.8	5.8	3.1	chr4	54797147	54797501	(135417054)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	2869903
6937	6.4	0.1	0.3	chr4	54797562	54798950	(135415605)	C	L1PA6	LINE/L1	(0)	6154	4770	2869904
1734	19.5	8.4	2.2	chr4	55650839	55651205	(134563350)	+	MSTD	LTR/ERVL-MaLR	3	394	(2)	2871267
1467	22.4	2.4	4.6	chr4	57361778	57362123	(132852432)	C	MLT1B	LTR/ERVL-MaLR	(5)	385	49	2874396
1854	19.5	6.6	0.8	chr4	57362124	57362496	(132852059)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2874397
1467	22.4	2.4	4.6	chr4	57362497	57362537	(132852018)	C	MLT1B	LTR/ERVL-MaLR	(342)	48	8	2874396
2044	13.6	0.3	0.0	chr4	59871374	59871660	(130342895)	C	AluSq2	SINE/Alu	(25)	288	1	2877510
1613	21.9	7.8	1.7	chr4	59871718	59872079	(130342476)	C	MSTD	LTR/ERVL-MaLR	(10)	386	1	2877511
3141	15.9	6.1	1.2	chr4	61504371	61505392	(128709163)	C	L1MA4	LINE/L1	(9)	6291	5178	2879519
3430	20.4	13.9	3.9	chr4	61816701	61817614	(128396941)	+	MER52A	LTR/ERV1	12	1143	(612)	2879925
8557	5.8	0.9	0.0	chr4	62337959	62339019	(127875536)	C	MER11C	LTR/ERVK	(0)	1071	1	2880656
8827	14.9	5.1	0.8	chr4	64452970	64454429	(125760126)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	49	2883179
12	25.4	4.7	3.0	chr4	67545660	67545723	(122668832)	+	(CCTCCAG)n	Simple_repeat	1	67	(0)	2887099
2478	14.8	3.0	2.1	chr4	73158583	73159004	(117055551)	+	MSTC	LTR/ERVL-MaLR	1	426	(2)	2894499
1181	27.6	4.1	3.4	chr4	73159005	73159160	(117055395)	+	L2a	LINE/L2	3188	3343	(83)	2894496
11569	25.2	1.6	1.4	chr4	73666446	73669843	(116544712)	C	HERVK13-int	LTR/ERVK	(0)	8116	4036	2895188
2379	8.9	0.3	0.0	chr4	79214521	79214822	(110999733)	+	AluY	SINE/Alu	4	306	(5)	2903334
1793	16.7	5.8	3.7	chr4	79214823	79215029	(110999526)	+	MSTD	LTR/ERVL-MaLR	194	394	(2)	2903333
1752	19.0	8.3	1.9	chr4	79293776	79294145	(110920410)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2903433
1044	21.0	19.0	0.3	chr4	79398739	79399068	(110815487)	+	MLT1A1	LTR/ERVL-MaLR	1	406	(2)	2903580
15	22.8	1.8	3.6	chr4	82044169	82044223	(108170332)	+	G-rich	Low_complexity	1	56	(0)	2907008
2368	14.7	2.0	2.0	chr4	82122002	82122397	(108092158)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2907138
9110	16.6	3.1	2.7	chr4	82573866	82574372	(107640183)	C	L1MB5	LINE/L1	(913)	5233	4710	2907853
1510	18.0	9.6	2.5	chr4	82574373	82574737	(107639818)	+	MSTD	LTR/ERVL-MaLR	3	396	(0)	2907857
9110	16.6	3.1	2.7	chr4	82574738	82575129	(107639426)	C	L1MB5	LINE/L1	(1437)	4709	4324	2907853
2204	19.0	1.4	3.1	chr4	83224287	83224568	(106989987)	+	MER57F	LTR/ERV1	10	279	(156)	2909108
1548	15.2	20.4	1.2	chr4	83224569	83224887	(106989668)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2909109
2204	19.0	1.4	3.1	chr4	83224888	83225027	(106989528)	+	MER57F	LTR/ERV1	280	425	(10)	2909108
1666	18.7	1.8	3.2	chr4	84349329	84349601	(105864954)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	92	2910975
1054	21.4	10.5	7.1	chr4	84349602	84349979	(105864576)	C	MSTD	LTR/ERVL-MaLR	(0)	396	5	2910976
13	13.7	0.0	0.0	chr4	84903911	84903935	(105310620)	+	(CCGC)n	Simple_repeat	1	25	(0)	2911809
1728	11.2	9.2	2.5	chr4	84903936	84904219	(105310336)	+	MLT1A0	LTR/ERVL-MaLR	1	305	(60)	2911810
18	26.4	0.0	7.9	chr4	84966648	84966680	(105247875)	+	(TCC)n	Simple_repeat	1	43	(46)	2911910
13	9.3	0.0	0.0	chr4	84966681	84966703	(105247852)	+	(CTGA)n	Simple_repeat	1	23	(0)	2911911
18	26.4	0.0	7.9	chr4	84966704	84966736	(105247819)	+	(TCC)n	Simple_repeat	44	89	(0)	2911910
19	13.0	2.2	4.3	chr4	84966775	84966782	(105247773)	+	(CCTT)n	Simple_repeat	1	46	(0)	2911912
13	12.6	5.4	2.6	chr4	84966783	84966819	(105247736)	+	(CCTTT)n	Simple_repeat	1	39	(0)	2911913
1150	21.0	0.5	0.0	chr4	85032912	85033126	(105181429)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	150	2912024
1484	16.8	14.0	9.1	chr4	85033127	85033455	(105181100)	C	MSTD	LTR/ERVL-MaLR	(2)	394	37	2912025
7527	9.7	6.9	0.7	chr4	85033456	85034614	(105179941)	+	MER11B	LTR/ERVK	1	1236	(0)	2912026
893	23.5	18.0	11.2	chr4	85540781	85541142	(104673413)	+	LTR40b	LTR/ERVL	1	394	(68)	2912655
2718	1.1	0.0	0.0	chr4	85541143	85541452	(104673103)	C	AluYa5	SINE/Alu	(0)	311	1	2912656
1932	19.9	1.4	1.9	chr4	86920483	86920849	(103293706)	C	MSTD	LTR/ERVL-MaLR	(0)	396	32	2914611
323	9.8	0.0	0.0	chr4	86920850	86920890	(103293665)	+	Alu	SINE/Alu	1	41	(92)	2914614
2047	10.4	4.3	0.7	chr4	86920894	86921181	(103293374)	+	AluSp	SINE/Alu	1	299	(14)	2914615
13	17.6	2.5	2.4	chr4	87006836	87006876	(103207679)	+	(CTGCCGC)n	Simple_repeat	1	41	(0)	2914790
1728	16.5	10.4	4.3	chr4	87258737	87259104	(102955451)	+	MSTD	LTR/ERVL-MaLR	1	393	(3)	2915184
442	26.1	6.0	9.0	chr4	87727774	87727805	(102486750)	+	MER103C	DNA/hAT-Charlie	66	99	(198)	2915974
1774	19.9	4.8	2.8	chr4	87727806	87728193	(102486362)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2915975
1327	21.3	11.1	3.2	chr4	88584468	88584840	(101629715)	+	MLT1A1	LTR/ERVL-MaLR	1	406	(2)	2917417
368	35.4	5.4	4.7	chr4	88584841	88584927	(101629628)	+	MamSINE1	SINE/tRNA-RTE	127	212	(78)	2917416
2221	17.5	3.5	0.8	chr4	89076617	89077001	(101137554)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2918085
908	21.6	7.7	2.6	chr4	91736562	91736927	(98477628)	+	MSTC	LTR/ERVL-MaLR	1	427	(1)	2921478
1292	27.0	2.8	6.3	chr4	93476965	93477375	(96737180)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2923695
1629	18.9	10.6	0.6	chr4	93950703	93951058	(96263497)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2924285
2380	9.5	0.3	0.7	chr4	94665202	94665506	(95549049)	+	AluSc	SINE/Alu	1	304	(5)	2925343
201	35.8	8.8	8.0	chr4	95486692	95486822	(94727733)	+	L2b	LINE/L2	3136	3268	(119)	2926490
1618	18.3	11.9	0.6	chr4	95486823	95487173	(94727382)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2926491
202	33.5	7.2	6.1	chr4	95487174	95487290	(94727265)	+	L2b	LINE/L2	3269	3386	(1)	2926490
1770	18.9	9.3	0.8	chr4	95503046	95503407	(94711148)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2926505
1938	19.7	3.3	2.6	chr4	96609154	96609543	(93605012)	+	MSTD	LTR/ERVL-MaLR	4	396	(0)	2927894
1055	18.5	9.6	2.5	chr4	100080295	100080625	(90133930)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2932570
2156	14.2	2.4	1.4	chr4	101556822	101557192	(88657363)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	2934536
181	17.8	6.2	8.2	chr4	101557215	101557263	(88657292)	+	MER5B	DNA/hAT-Charlie	126	173	(5)	2934537
1015	21.3	8.4	1.9	chr4	107465499	107465836	(82748719)	+	MSTD	LTR/ERVL-MaLR	18	408	(0)	2942110
2392	15.1	1.0	1.8	chr4	107936256	107936654	(82277901)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2942709
13	19.3	0.0	10.2	chr4	109433779	109433789	(80780766)	+	(TCCC)n	Simple_repeat	1	58	(0)	2944950
13	20.3	4.3	2.0	chr4	109433790	109433836	(80780719)	+	(CCTCCCG)n	Simple_repeat	1	49	(0)	2944951
1327	17.4	16.8	4.4	chr4	109457312	109457654	(80756901)	C	MSTD	LTR/ERVL-MaLR	(2)	394	1	2944994
1047	25.4	10.7	7.2	chr4	109457655	109458014	(80756541)	C	MLT1D	LTR/ERVL-MaLR	(144)	361	1	2944993
1803	20.9	2.3	4.4	chr4	112868217	112868621	(77345934)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2950024
1398	19.4	5.2	6.0	chr4	116014933	116015313	(74199242)	+	LTR76	LTR/ERV1	294	675	(0)	2953954
1994	18.6	3.0	0.8	chr4	116015314	116015670	(74198885)	+	HERV3-int	LTR/ERV1	2	366	(8060)	2953954
933	23.2	8.2	4.7	chr4	116896430	116896877	(73317678)	+	MLT1B	LTR/ERVL-MaLR	1	450	(17)	2955025
2266	15.6	1.6	2.1	chr4	118044645	118045025	(72169530)	C	MSTD	LTR/ERVL-MaLR	(14)	382	4	2956378
31	21.1	0.0	0.0	chr4	119213638	119213699	(71000856)	+	(AT)n	Simple_repeat	1	62	(0)	2958122
1093	6.9	5.2	0.0	chr4	119213752	119213896	(71000659)	+	AluSx3	SINE/Alu	156	308	(3)	2958123
23	26.4	1.0	5.0	chr4	121697004	121697102	(68517453)	+	(CGGCC)n	Simple_repeat	1	100	(0)	2961412
1500	18.3	5.0	3.1	chr4	121702000	121702222	(68512333)	C	MLT1A0	LTR/ERVL-MaLR	(2)	363	139	2961421
1796	15.7	11.2	3.9	chr4	121702223	121702586	(68511969)	C	MSTD	LTR/ERVL-MaLR	(2)	394	1	2961422
1500	18.3	5.0	3.1	chr4	121702587	121702718	(68511837)	C	MLT1A0	LTR/ERVL-MaLR	(227)	138	1	2961421
2342	11.1	5.4	2.1	chr4	121733999	121734377	(68480178)	+	MSTC	LTR/ERVL-MaLR	1	392	(36)	2961488
339	10.9	8.6	0.0	chr4	121734378	121734441	(68480114)	+	MSTC	LTR/ERVL-MaLR	354	423	(5)	2961488
13	19.6	0.0	0.0	chr4	122152490	122152519	(68062036)	+	(GCC)n	Simple_repeat	1	30	(0)	2962145
2095	14.0	0.3	0.7	chr4	122408269	122408575	(67805980)	C	AluSq	SINE/Alu	(7)	306	1	2962452
1623	15.1	1.4	1.4	chr4	122761318	122761613	(67452942)	+	L1MC3	LINE/L1	7408	7703	(82)	2962970
1653	19.7	8.4	4.8	chr4	122761614	122761991	(67452564)	+	MSTD	LTR/ERVL-MaLR	1	393	(3)	2962971
439	14.3	0.0	3.5	chr4	122761997	122762083	(67452472)	+	L1MC3	LINE/L1	7701	7784	(1)	2962970
1240	18.7	11.0	3.2	chr4	124949503	124949844	(65264711)	+	MLT1A	LTR/ERVL-MaLR	3	374	(0)	2965951
21	28.4	0.0	0.0	chr4	124949877	124949940	(65264615)	+	(TTTTTT)n	Simple_repeat	1	64	(0)	2965952
14	4.9	0.0	0.0	chr4	125315653	125315673	(64898882)	+	(GGC)n	Simple_repeat	1	21	(0)	2966466
1266	24.7	19.7	2.1	chr4	125822617	125823358	(64391197)	+	L1MEc	LINE/L1	26	896	(5504)	2967123
1051	26.1	12.9	0.6	chr4	125823359	125823705	(64390850)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2967124
2237	15.7	10.5	0.0	chr4	127536382	127536764	(62677791)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	2969180
4196	16.8	3.7	2.9	chr4	127536838	127537669	(62676886)	C	L1MA10	LINE/L1	(56)	6278	5440	2969181
1085	24.2	8.1	9.9	chr4	128713543	128713828	(61500727)	C	MSTD	LTR/ERVL-MaLR	(0)	396	123	2971177
2622	8.3	0.0	0.0	chr4	128713829	128714130	(61500425)	C	AluY	SINE/Alu	(9)	302	1	2971178
1792	17.0	8.6	0.9	chr4	128752178	128752521	(61462034)	+	MSTD	LTR/ERVL-MaLR	1	373	(23)	2971275
2265	10.8	0.0	2.6	chr4	128752522	128752827	(61461728)	+	AluSz	SINE/Alu	9	306	(6)	2971276
1518	25.1	2.7	1.7	chr4	136642090	136642450	(53572105)	C	MSTD	LTR/ERVL-MaLR	(31)	365	1	2980730
1077	19.8	8.2	3.6	chr4	139033780	139034001	(51180554)	C	AluJb	SINE/Alu	(57)	255	23	2983809
1358	18.8	9.2	3.8	chr4	139034052	139034371	(51180184)	C	MSTD	LTR/ERVL-MaLR	(57)	339	1	2983810
1658	16.8	15.7	1.2	chr4	139662263	139662600	(50551955)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	2985067
17	20.7	3.3	3.2	chr4	143184775	143184834	(47029721)	+	G-rich	Low_complexity	1	62	(0)	2989909
35	2.8	0.0	0.0	chr4	143184837	143184873	(47029682)	+	(GGCGGAGG)n	Simple_repeat	1	37	(0)	2989910
1044	34.2	6.0	8.1	chr4	144897872	144898302	(45316253)	C	MLT1I-int	LTR/ERVL-MaLR	(327)	1060	673	2992174
1628	19.5	8.1	0.0	chr4	144898303	144898666	(45315889)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2992179
1044	34.2	6.0	8.1	chr4	144898667	144899313	(45315242)	C	MLT1I-int	LTR/ERVL-MaLR	(715)	672	6	2992174
1333	22.1	10.9	2.2	chr4	147249171	147249531	(42965024)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2995365
254	25.6	7.8	7.8	chr4	147411007	147411264	(42803291)	+	L1ME4a	LINE/L1	5845	6102	(22)	2995549
818	21.4	23.1	4.7	chr4	147411267	147411584	(42802971)	+	MSTD	LTR/ERVL-MaLR	3	396	(0)	2995550
2717	15.8	1.9	0.0	chr4	147595992	147596410	(42618145)	+	MSTC	LTR/ERVL-MaLR	2	428	(0)	2995852
12	26.6	4.5	2.9	chr4	148445298	148445363	(41769192)	+	(CCTCG)n	Simple_repeat	1	69	(0)	2997129
19	25.8	4.5	1.4	chr4	148445549	148445615	(41768940)	+	(CG)n	Simple_repeat	1	70	(0)	2997130
16	22.0	1.8	3.5	chr4	148445644	148445699	(41768856)	+	G-rich	Low_complexity	1	57	(0)	2997131
1735	17.7	7.5	0.0	chr4	149810103	149810385	(40404170)	+	AluJb	SINE/Alu	1	306	(6)	2998861
425	19.7	1.5	10.8	chr4	149810400	149810454	(40404101)	+	BLACKJACK	DNA/hAT-Blackjack	2836	2887	(82)	2998862
11772	9.9	1.0	0.1	chr4	152144908	152146471	(38068084)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	2	3002526
2225	15.1	9.6	1.1	chr4	153745590	153745951	(36468604)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3005127
2290	19.7	1.3	1.3	chr4	153778312	153778707	(36435848)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3005178
6612	24.9	2.9	4.5	chr4	157413356	157415119	(32799436)	C	MLT1A1-int	LTR/ERVL-MaLR	(0)	1735	1	3010062
1000	22.6	12.3	5.1	chr4	157415121	157415451	(32799104)	C	MLT1A1	LTR/ERVL-MaLR	(7)	358	1	3010062
1789	17.4	8.6	1.4	chr4	158376559	158376925	(31837630)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3011287
219	24.2	10.2	3.1	chr4	158956218	158956281	(31258274)	+	MER5B	DNA/hAT-Charlie	2	70	(108)	3012151
2234	12.0	0.3	0.0	chr4	158956285	158956583	(31257972)	+	AluSx4	SINE/Alu	2	301	(9)	3012152
1782	19.8	10.9	1.7	chr4	159490375	159490733	(30723822)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3013014
1492	23.4	2.4	2.9	chr4	159490736	159491118	(30723437)	+	MSTD-int	LTR/ERVL-MaLR	2	382	(1353)	3013014
18	12.2	2.6	0.0	chr4	163494143	163494171	(26720384)	+	(AAGAA)n	Simple_repeat	1	30	(0)	3018139
33	5.3	0.0	0.0	chr4	163494172	163494211	(26720344)	+	(GGGCA)n	Simple_repeat	1	40	(0)	3018140
1205	16.5	10.2	10.7	chr4	164662648	164662993	(25551562)	+	LTR14A	LTR/ERVK	1	344	(0)	3019675
801	16.5	0.7	0.0	chr4	164663070	164663202	(25551353)	+	MSTD	LTR/ERVL-MaLR	233	366	(30)	3019676
1685	17.9	6.8	4.7	chr4	164714867	164715253	(25499302)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3019751
16	16.3	4.9	0.0	chr4	165207420	165207460	(25007095)	+	(GCCC)n	Simple_repeat	1	43	(0)	3020741
25	14.7	0.0	0.0	chr4	165207463	165207507	(25007048)	+	(CAG)n	Simple_repeat	1	45	(0)	3020742
2030	16.9	9.3	0.0	chr4	166226221	166226611	(23987944)	C	LTR51	LTR/ERV1	(240)	431	1	3022114
582	23.5	10.3	4.6	chr4	166226612	166226869	(23987686)	C	MSTD	LTR/ERVL-MaLR	(95)	301	1	3022113
1216	21.5	9.6	2.5	chr4	167020375	167020741	(23193814)	+	MLT1A1	LTR/ERVL-MaLR	1	396	(12)	3023061
975	26.4	7.1	4.7	chr4	168210740	168210912	(22003643)	+	MSTD	LTR/ERVL-MaLR	1	172	(224)	3024506
1642	12.3	0.5	0.0	chr4	168210913	168211131	(22003424)	+	AluSz6	SINE/Alu	38	257	(55)	3024507
975	26.4	7.1	4.7	chr4	168211132	168211343	(22003212)	+	MSTD	LTR/ERVL-MaLR	173	396	(0)	3024506
3696	23.8	9.2	3.8	chr4	168211344	168211500	(22003055)	+	L1MDa	LINE/L1	2330	2484	(4149)	3024503
2528	13.4	3.4	3.4	chr4	169883344	169883759	(20330796)	+	MSTC	LTR/ERVL-MaLR	1	416	(12)	3027017
16	17.4	8.8	2.7	chr4	170089984	170090051	(20124504)	+	(GCCGC)n	Simple_repeat	1	74	(0)	3027354
2657	27.6	8.6	1.6	chr4	170614175	170614955	(19599600)	C	MLT-int	LTR/ERVL-MaLR	(109)	1626	742	3027977
1693	17.4	10.1	4.6	chr4	170614974	170615346	(19599209)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3027978
1713	19.3	6.8	1.9	chr4	173442589	173442963	(16771592)	C	MSTD	LTR/ERVL-MaLR	(0)	396	2	3031636
2049	18.8	3.3	3.5	chr4	173864288	173864684	(16349871)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3032192
13	18.9	2.8	0.0	chr4	174283346	174283381	(15931174)	+	A-rich	Low_complexity	1	37	(0)	3032746
2750	23.6	4.5	1.5	chr4	176967287	176967956	(13246599)	C	MER76	LTR/ERVL	(0)	691	1	3036258
1391	28.2	11.3	4.8	chr4	176967957	176969268	(13245287)	+	L1MEg	LINE/L1	178	2680	(4653)	3036257
1004	18.0	28.0	0.3	chr4	176979839	176980122	(13234433)	+	MSTD	LTR/ERVL-MaLR	4	396	(0)	3036270
1063	21.8	5.2	3.3	chr4	177254001	177254354	(12960201)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3036651
1874	13.3	5.8	9.1	chr4	177572432	177572827	(12641728)	C	MSTD	LTR/ERVL-MaLR	(12)	384	3	3037138
1780	13.3	7.3	1.4	chr4	178369784	178370141	(11844414)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3038106
2571	20.6	6.9	5.5	chr4	178370142	178370171	(11844384)	C	L1MA9	LINE/L1	(1479)	5624	5599	3038105
1497	19.2	9.1	5.0	chr4	178791005	178791383	(11423172)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3038663
1558	21.9	3.0	3.5	chr4	180012891	180013288	(10201267)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3040225
860	20.4	1.0	4.5	chr4	180032406	180032605	(10181950)	C	MSTD	LTR/ERVL-MaLR	(0)	396	204	3040244
1089	19.4	2.7	0.5	chr4	180032601	180032817	(10181738)	C	MLT2B3	LTR/ERVL	(325)	229	8	3040245
7302	18.7	8.9	14.6	chr4	183383510	183385382	(6829173)	+	MER52A	LTR/ERV1	1	1755	(0)	3044843
15	13.3	7.3	0.0	chr4	183504266	183504306	(6710249)	+	(CGCACGC)n	Simple_repeat	1	44	(0)	3045071
14	3.6	6.7	3.1	chr4	183504426	183504455	(6710100)	+	(CGGAG)n	Simple_repeat	1	32	(0)	3045072
1626	25.6	7.0	2.0	chr4	184688425	184688813	(5525742)	C	LTR80A	LTR/ERVL	(13)	570	153	3047019
13	14.1	0.0	5.7	chr4	185535556	185535590	(4678965)	+	(CCGCC)n	Simple_repeat	1	35	(0)	3048440
1515	24.1	6.6	1.6	chr4	186940866	186941241	(3273314)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3050355
2252	17.7	0.9	5.4	chr4	189333916	189334363	(880192)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	3053715
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
4747	18.1	7.3	9.6	chr4	190119764	190122447	(92108)	+	TAR1	Satellite/telo	1	2622	(566)	3054643
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
552	24.1	4.7	0.0	chr5	1800232	1800372	(179737887)	C	L1ME2z	LINE/L1	(3)	6441	6294	3056665
1416	21.1	13.6	1.7	chr5	6098192	6098491	(175439768)	C	MSTD	LTR/ERVL-MaLR	(42)	354	1	3061386
438	27.2	0.0	11.8	chr5	6098492	6098643	(175439616)	+	L1ME1	LINE/L1	5179	5304	(842)	3061385
1379	23.9	9.7	9.0	chr5	6516142	6516956	(175021303)	C	MER101-int	LTR/ERV1	(2750)	2121	725	3061945
816	23.8	4.8	1.6	chr5	6516957	6517200	(175021059)	C	MER34	LTR/ERV1	(257)	285	34	3061953
1032	21.2	14.1	5.0	chr5	7335398	7335755	(174202504)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3063025
2367	15.4	7.2	0.2	chr5	10314830	10315227	(171223032)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	3066676
1376	21.7	8.1	1.7	chr5	10315228	10315612	(171222647)	+	MLT1F1	LTR/ERVL-MaLR	125	528	(41)	3066667
323	31.4	1.4	6.6	chr5	13904940	13905161	(167633098)	+	L1MEd	LINE/L1	2267	2484	(3662)	3071443
1596	19.9	11.1	0.3	chr5	13905193	13905545	(167632714)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3071447
9893	10.9	4.0	9.2	chr5	14454755	14456422	(167081837)	C	LTR12C	LTR/ERV1	(0)	1579	3	3072195
18	23.7	1.7	3.3	chr5	14871555	14871613	(166666646)	+	(GGC)n	Simple_repeat	1	60	(0)	3072771
18	0.0	0.0	0.0	chr5	14871718	14871739	(166666520)	+	(CGG)n	Simple_repeat	1	22	(0)	3072772
18	0.0	0.0	0.0	chr5	14871812	14871833	(166666426)	+	(CGC)n	Simple_repeat	1	22	(0)	3072773
12	15.3	2.4	7.0	chr5	14871885	14871926	(166666333)	+	G-rich	Low_complexity	1	43	(0)	3072774
1415	17.5	17.9	0.6	chr5	16409799	16410125	(165128134)	+	MLT1A1	LTR/ERVL-MaLR	1	396	(12)	3074954
1621	18.8	3.8	4.5	chr5	16797860	16798255	(164740004)	+	MSTD	LTR/ERVL-MaLR	4	396	(0)	3075546
2443	17.0	10.0	3.5	chr5	16798256	16798359	(164739900)	+	L1MB5	LINE/L1	6078	6174	(0)	3075545
3648	15.2	2.5	7.1	chr5	16890217	16890562	(164647697)	+	L1MB7	LINE/L1	5472	5819	(365)	3075715
60	0.0	3.5	0.0	chr5	16895746	16895803	(164642456)	+	(AC)n	Simple_repeat	1	60	(0)	3075727
1911	19.9	6.1	0.5	chr5	18412877	18413245	(163125014)	+	MSTD	LTR/ERVL-MaLR	1	391	(5)	3078040
5949	24.9	3.9	6.5	chr5	22372153	22373987	(159164272)	+	L1MA4A	LINE/L1	1	1785	(5064)	3083338
2231	15.3	9.6	0.3	chr5	22668397	22668783	(158869476)	C	MSTC	LTR/ERVL-MaLR	(1)	427	1	3083738
1508	21.4	7.8	3.7	chr5	23313955	23314333	(158223926)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3084584
696	27.5	3.5	6.3	chr5	23873860	23874096	(157664163)	C	MSTD	LTR/ERVL-MaLR	(7)	389	160	3085363
1677	18.4	0.7	2.3	chr5	23874186	23874490	(157663769)	+	AluJo	SINE/Alu	1	300	(12)	3085364
279	29.4	10.9	6.3	chr5	32461857	32462030	(149076229)	+	MER5A	DNA/hAT-Charlie	1	183	(6)	3096898
1160	15.6	6.3	3.8	chr5	32462079	32462404	(149075855)	+	MSTD	LTR/ERVL-MaLR	16	396	(0)	3096899
1547	17.6	6.9	1.1	chr5	32721380	32721652	(148816607)	+	AluSz6	SINE/Alu	1	290	(22)	3097355
1148	24.0	10.6	5.3	chr5	32721730	32722103	(148816156)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3097356
837	31.6	8.8	2.9	chr5	32722113	32722666	(148815593)	+	MamRep605	LTR?	224	813	(36)	3097354
1651	25.1	6.6	6.9	chr5	34015301	34015849	(147522410)	+	MLT1F2	LTR/ERVL-MaLR	14	560	(0)	3099233
801	14.3	4.3	0.0	chr5	36693500	36693632	(144844627)	+	MER5A	DNA/hAT-Charlie	1	139	(50)	3103198
1005	17.7	6.3	0.0	chr5	36821828	36822019	(144716240)	C	MSTD	LTR/ERVL-MaLR	(12)	384	180	3103401
17619	10.8	2.0	1.7	chr5	36822031	36825644	(144712615)	C	L1PB2	LINE/L1	(3)	6148	2527	3103402
2074	15.8	6.1	3.1	chr5	36939584	36939967	(144598292)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3103581
27	19.1	4.7	5.4	chr5	37371280	37371385	(144166874)	+	G-rich	Low_complexity	1	111	(0)	3104376
924	23.3	2.1	2.9	chr5	39264230	39264472	(142273787)	+	MLT1A0	LTR/ERVL-MaLR	125	365	(0)	3107331
315	29.6	6.5	4.0	chr5	39264473	39264698	(142273561)	+	L2b	LINE/L2	2898	3126	(249)	3107330
13	20.5	5.8	1.8	chr5	40797717	40797768	(140740491)	+	(CGCCCGC)n	Simple_repeat	1	55	(0)	3109433
2143	18.1	2.5	0.0	chr5	40984646	40985031	(140553228)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3109800
574	32.3	5.0	1.1	chr5	42057457	42057722	(139480537)	+	MLT1I	LTR/ERVL-MaLR	132	408	(3)	3111172
7404	12.8	6.7	0.7	chr5	51944060	51945596	(129592663)	+	THE1D-int	LTR/ERVL-MaLR	3	1631	(0)	3118382
10431	11.3	3.5	1.3	chr5	54353500	54355041	(127183218)	+	THE1B-int	LTR/ERVL-MaLR	1	1578	(2)	3121586
691	29.6	4.4	5.0	chr5	54468373	54468582	(127069677)	C	L1ME3B	LINE/L1	(571)	5671	5458	3121765
1303	19.9	18.9	1.2	chr5	54468583	54468917	(127069342)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	3121770
13	18.9	0.0	0.0	chr5	56480965	56480994	(125057265)	+	GA-rich	Low_complexity	1	30	(0)	3125098
2156	14.0	12.5	2.4	chr5	59931366	59931691	(121606568)	C	MSTC	LTR/ERVL-MaLR	(3)	425	55	3130200
1531	20.3	4.1	2.5	chr5	61411556	61411914	(120126345)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	3132230
1870	19.9	2.0	2.3	chr5	61636308	61636704	(119901555)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3132564
1673	20.9	12.9	3.1	chr5	61636705	61637085	(119901174)	C	MLT1D	LTR/ERVL-MaLR	(72)	433	1	3132563
1960	17.6	6.1	0.3	chr5	62791008	62791378	(118746881)	+	MSTD	LTR/ERVL-MaLR	1	394	(2)	3134377
637	31.7	2.7	8.7	chr5	62791379	62791666	(118746593)	C	L3	LINE/CR1	(311)	3788	3515	3134376
2454	9.4	0.0	0.3	chr5	65510495	65510803	(116027456)	+	AluSq	SINE/Alu	3	310	(3)	3137949
2243	14.2	4.2	3.3	chr5	65510804	65511089	(116027170)	+	MSTC	LTR/ERVL-MaLR	132	428	(0)	3137948
13	17.0	3.0	0.0	chr5	66144345	66144377	(115393882)	+	G-rich	Low_complexity	1	34	(0)	3139018
17	18.3	0.0	0.0	chr5	66144385	66144421	(115393838)	+	(CGGCTT)n	Simple_repeat	1	37	(0)	3139019
30	0.0	0.0	0.0	chr5	66156261	66156288	(115381971)	+	(TTTTTG)n	Simple_repeat	1	28	(0)	3139035
2064	8.6	0.0	0.0	chr5	67187928	67188184	(114350075)	+	AluSc5	SINE/Alu	39	295	(14)	3140471
1770	19.5	4.3	5.0	chr5	67188185	67188393	(114349866)	+	MSTD	LTR/ERVL-MaLR	184	396	(0)	3140470
382	28.3	5.5	1.7	chr5	69189834	69190009	(112348250)	+	MIRb	SINE/MIR	45	227	(41)	3143460
18	0.0	0.0	0.0	chr5	69494186	69494205	(112044054)	+	(TG)n	Simple_repeat	1	20	(0)	3144178
2079	10.0	3.1	0.0	chr5	69494206	69494485	(112043774)	C	AluSx1	SINE/Alu	(23)	289	1	3144179
2531	13.4	5.4	0.0	chr5	72311400	72311803	(109226456)	+	MSTC	LTR/ERVL-MaLR	2	428	(0)	3148786
1820	17.2	10.3	0.6	chr5	72530727	72531083	(109007176)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3149119
2019	16.2	0.3	10.5	chr5	73325857	73326284	(108211975)	C	MLT1B	LTR/ERVL-MaLR	(4)	386	3	3150324
11168	16.9	4.9	3.0	chr5	73330430	73331225	(108207034)	C	L1MDa	LINE/L1	(3544)	2993	2261	3150332
1359	21.5	6.4	7.3	chr5	73331226	73331622	(108206637)	+	MSTD	LTR/ERVL-MaLR	4	396	(0)	3150334
11168	19.4	6.9	4.5	chr5	73331623	73333719	(108204540)	C	L1MDa	LINE/L1	(4373)	2260	19	3150332
8056	17.6	6.8	2.5	chr5	75158796	75160670	(106377589)	+	L1M4b	LINE/L1	1369	3236	(3631)	3153135
1865	16.0	4.1	4.6	chr5	75160671	75161036	(106377223)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	3153137
212	36.4	7.9	2.1	chr5	75336422	75336612	(106201647)	C	L2	LINE/L2	(640)	2779	2577	3153385
1446	23.4	6.3	5.1	chr5	77951065	77951455	(103586804)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3157438
2550	6.3	0.3	0.0	chr5	79611683	79611982	(101926277)	C	AluSg	SINE/Alu	(9)	301	1	3160093
1862	19.4	6.3	6.0	chr5	79869712	79869915	(101668344)	C	MLT1D	LTR/ERVL-MaLR	(320)	185	1	3160487
1521	20.1	11.9	2.2	chr5	80090124	80090480	(101447779)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3160829
588	29.7	5.7	7.2	chr5	80090481	80090676	(101447583)	C	MamGypLTR1d	LTR/Gypsy	(593)	220	9	3160828
255	20.7	8.9	7.9	chr5	80497111	80497143	(101041116)	+	L1MC2	LINE/L1	6289	6316	(28)	3161667
1963	15.3	3.5	0.0	chr5	80497144	80497444	(101040815)	+	AluSx1	SINE/Alu	1	312	(0)	3161677
230	34.8	10.0	3.5	chr5	81676446	81676677	(99861582)	+	L2c	LINE/L2	2916	3164	(223)	3163471
1342	24.9	4.8	3.1	chr5	86451361	86451749	(95086510)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3169814
1731	15.7	13.8	1.7	chr5	92291603	92291958	(89246301)	C	MSTC	LTR/ERVL-MaLR	(0)	428	23	3177296
2445	28.8	6.8	15.6	chr5	95382558	95383279	(86154980)	C	L2a	LINE/L2	(1495)	1924	1179	3181080
224	37.0	14.1	5.3	chr5	96580263	96580501	(84957758)	+	L3	LINE/CR1	3277	3566	(533)	3182764
722	22.6	1.2	0.0	chr5	96580502	96580665	(84957594)	C	MER5A1	DNA/hAT-Charlie	(0)	166	1	3182765
224	37.0	14.1	5.3	chr5	96580666	96580792	(84957467)	+	L3	LINE/CR1	3567	3685	(414)	3182764
15	26.3	1.8	1.8	chr5	96936299	96936355	(84601904)	+	GA-rich	Low_complexity	1	57	(0)	3183366
990	27.5	1.1	4.2	chr5	103224371	103224655	(78313604)	+	L1PA17	LINE/L1	922	1197	(6018)	3191142
774	21.3	1.5	6.2	chr5	103224721	103224930	(78313329)	+	L1PA17	LINE/L1	1488	1687	(5248)	3191142
1512	23.6	2.5	1.5	chr5	104661216	104661607	(76876652)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3192936
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
13	14.1	0.0	5.7	chr5	107672698	107672732	(73865527)	+	(CCCCTC)n	Simple_repeat	1	35	(0)	3196634
283	31.4	10.2	4.6	chr5	108727825	108728018	(72810241)	C	MIRb	SINE/MIR	(58)	210	5	3198049
20	30.0	3.5	0.0	chr5	109689790	109689874	(71848385)	+	(GCG)n	Simple_repeat	1	88	(0)	3199330
1924	17.5	7.4	0.3	chr5	109851322	109851687	(71686572)	+	MSTD	LTR/ERVL-MaLR	1	394	(2)	3199545
1911	20.3	2.5	1.3	chr5	110293186	110293574	(71244685)	+	MSTD	LTR/ERVL-MaLR	1	394	(2)	3200064
4739	26.5	7.3	4.2	chr5	110293575	110294997	(71243262)	+	MSTD-int	LTR/ERVL-MaLR	2	1471	(264)	3200064
1471	19.0	2.3	1.0	chr5	112620104	112620401	(68917858)	+	MLT1A0	LTR/ERVL-MaLR	62	363	(2)	3203010
1378	22.6	9.3	3.0	chr5	113271596	113271965	(68266294)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3204040
12	20.0	5.0	0.0	chr5	115262801	115262840	(66275419)	+	(CCGCTCA)n	Simple_repeat	1	42	(0)	3206534
1275	18.0	16.8	4.8	chr5	115323099	115323472	(66214787)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	3206631
1509	22.9	3.9	3.9	chr5	116209885	116210266	(65327993)	C	MSTD	LTR/ERVL-MaLR	(14)	382	1	3207840
10772	12.4	2.3	0.6	chr5	118656893	118658495	(62879764)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	3211115
1724	21.4	8.7	0.8	chr5	118833814	118834203	(62704056)	+	LTR33C	LTR/ERVL	198	621	(8)	3211336
1281	15.8	4.9	0.3	chr5	118834226	118834457	(62703802)	C	MSTD	LTR/ERVL-MaLR	(0)	408	117	3211337
495	12.1	0.0	0.0	chr5	118834506	118834571	(62703688)	C	Tigger1	DNA/TcMar-Tigger	(0)	2418	2353	3211338
344	32.4	12.7	2.8	chr5	118834576	118834852	(62703407)	+	L2a	LINE/L2	3090	3426	(0)	3211339
1428	17.9	12.4	5.5	chr5	122615509	122615875	(58922384)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3216136
859	20.7	3.4	0.6	chr5	122870923	122871092	(58667167)	C	MER5B	DNA/hAT-Charlie	(3)	175	1	3216584
13	25.3	5.4	0.0	chr5	123423087	123423142	(58115117)	+	(CCCCGGT)n	Simple_repeat	1	59	(0)	3217346
13	18.4	5.4	0.0	chr5	123423318	123423354	(58114905)	+	(GCC)n	Simple_repeat	1	39	(0)	3217347
2020	17.1	2.5	3.7	chr5	123805465	123805865	(57732394)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3217867
2303	9.9	0.3	0.0	chr5	123895723	123896016	(57642243)	C	AluSp	SINE/Alu	(18)	295	1	3217967
758	28.6	1.5	0.5	chr5	123896017	123896165	(57642094)	+	MER58A	DNA/hAT-Charlie	46	195	(29)	3217966
1260	24.9	10.1	2.1	chr5	123896166	123896538	(57641721)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	3	3217968
2024	18.6	2.5	1.3	chr5	124003825	124004215	(57534044)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3218102
504	24.7	10.1	9.5	chr5	124155944	124156031	(57382228)	+	L1ME2	LINE/L1	6065	6162	(2)	3218283
1447	19.1	3.1	0.0	chr5	124156073	124156318	(57381941)	+	AluJr4	SINE/Alu	34	287	(25)	3218285
9870	12.3	7.0	0.3	chr5	124203250	124204410	(57333849)	+	THE1D-int	LTR/ERVL-MaLR	423	1628	(3)	3218358
2342	11.7	1.9	5.2	chr5	124319777	124320164	(57218095)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3218517
392	30.1	3.2	14.0	chr5	124705901	124706178	(56832081)	C	L2b	LINE/L2	(2)	3385	3139	3218999
900	27.7	13.5	2.0	chr5	124940103	124940318	(56597941)	C	L2a	LINE/L2	(0)	3426	3192	3219398
1660	15.7	10.5	0.9	chr5	124940319	124940646	(56597613)	C	MLT1A0	LTR/ERVL-MaLR	(2)	363	1	3219399
707	22.8	9.9	4.1	chr5	128702048	128702339	(52835920)	+	MSTD	LTR/ERVL-MaLR	1	350	(46)	3224459
5261	23.7	7.4	3.7	chr5	128702358	128703818	(52834441)	+	MSTD-int	LTR/ERVL-MaLR	2	1512	(223)	3224460
662	28.9	10.7	4.6	chr5	130198896	130199351	(51338908)	C	MLT1H1	LTR/ERVL-MaLR	(0)	579	85	3226260
1929	19.6	5.1	0.8	chr5	130671714	130672089	(50866170)	+	MSTD	LTR/ERVL-MaLR	4	396	(0)	3226822
15	22.9	1.5	6.1	chr5	132012792	132012856	(49525403)	+	(CAGAGAG)n	Simple_repeat	1	66	(0)	3228815
2073	17.1	6.6	0.3	chr5	132248858	132249227	(49289032)	C	MSTD	LTR/ERVL-MaLR	(1)	395	1	3229093
14	18.8	6.0	1.9	chr5	134845910	134845959	(46692300)	+	(CGCGTG)n	Simple_repeat	1	53	(0)	3233498
2429	8.1	0.3	0.0	chr5	134865940	134866249	(46672010)	C	AluY	SINE/Alu	(0)	311	1	3233539
17	13.0	0.0	2.8	chr5	135930280	135930315	(45607944)	+	G-rich	Low_complexity	1	36	(0)	3234978
13	10.8	6.7	0.0	chr5	136132815	136132844	(45405415)	+	(CCTC)n	Simple_repeat	1	32	(0)	3235278
2641	27.3	7.1	4.9	chr5	137322350	137322776	(44215483)	+	L1MB1	LINE/L1	2166	2622	(4983)	3236798
1625	19.5	8.9	5.3	chr5	137322777	137323155	(44215104)	C	MSTD	LTR/ERVL-MaLR	(2)	394	1	3236803
2641	15.7	5.0	1.9	chr5	137323156	137323535	(44214724)	+	L1MB1	LINE/L1	2623	3085	(3641)	3236798
19	24.5	1.3	5.0	chr5	138033058	138033158	(43505101)	+	(GGCGG)n	Simple_repeat	1	97	(0)	3237963
1495	25.5	7.6	0.9	chr5	138065070	138065488	(43472771)	+	LTR16A	LTR/ERVL	2	450	(1)	3238037
1252	23.8	3.6	3.1	chr5	138065489	138065535	(43472724)	C	HAL1	LINE/L1	(1106)	1401	1353	3238036
396	32.1	5.6	1.1	chr5	138702577	138702718	(42835541)	+	MIRc	SINE/MIR	62	212	(56)	3239398
491	23.0	13.2	1.7	chr5	138775534	138775714	(42762545)	C	L1MC4	LINE/L1	(241)	7801	7597	3239592
2229	9.1	0.0	1.8	chr5	138775715	138776025	(42762234)	C	AluY	SINE/Alu	(0)	311	1	3239593
1097	28.6	8.2	5.3	chr5	140357876	140358117	(41180142)	C	L2a	LINE/L2	(6)	3420	3181	3242453
2429	5.2	0.3	5.8	chr5	140358118	140358444	(41179815)	+	AluY	SINE/Alu	1	309	(2)	3242454
1696	15.4	10.0	2.3	chr5	142072510	142072860	(39465399)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3245192
1239	20.4	11.2	5.8	chr5	142072861	142073101	(39465158)	+	MLT1A0	LTR/ERVL-MaLR	101	365	(0)	3245191
256	5.3	0.0	0.0	chr5	142073102	142073138	(39465121)	+	MER34A1	LTR/ERV1	111	147	(424)	3245190
629	21.5	1.5	0.8	chr5	142073135	142073264	(39464995)	C	FLAM_A	SINE/Alu	(11)	131	1	3245193
2368	18.2	3.1	0.5	chr5	142073268	142073713	(39464546)	+	MER34A1	LTR/ERV1	130	587	(0)	3245190
15	4.8	0.0	0.0	chr5	142770469	142770490	(38767769)	+	(CTCG)n	Simple_repeat	1	22	(0)	3246639
8311	25.2	4.4	3.2	chr5	144278797	144279468	(37258791)	C	L1MD2	LINE/L1	(1487)	5057	4384	3249049
1809	20.8	6.3	1.1	chr5	144279469	144279843	(37258416)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3249051
344	29.7	19.3	0.5	chr5	145772118	145772327	(35765932)	C	MIR	SINE/MIR	(3)	259	1	3251251
1371	21.2	9.7	1.9	chr5	145772387	145772746	(35765513)	C	MSTD	LTR/ERVL-MaLR	(5)	391	1	3251252
16	22.2	2.6	6.3	chr5	146657324	146657400	(34880859)	+	GA-rich	Low_complexity	1	79	(0)	3252939
1236	23.9	8.7	0.6	chr5	147750638	147750986	(33787273)	+	MLT1B	LTR/ERVL-MaLR	1	380	(10)	3254786
8083	16.2	6.0	4.3	chr5	149325060	149325657	(32212602)	+	L1M4b	LINE/L1	19	640	(6227)	3257478
1463	18.6	15.2	1.8	chr5	149325658	149325997	(32212262)	C	MSTD	LTR/ERVL-MaLR	(2)	394	1	3257479
8083	16.2	6.0	4.3	chr5	149325998	149326257	(32212002)	+	L1M4b	LINE/L1	641	916	(5951)	3257478
1329	27.8	10.5	5.0	chr5	149667841	149668496	(31869763)	C	Tigger12c	DNA/TcMar-Tigger	(35)	699	4	3258267
16	12.8	5.7	0.0	chr5	149732036	149732045	(31806214)	+	(GC)n	Simple_repeat	1	10	(0)	3258412
38	0.0	0.0	0.0	chr5	149732046	149732078	(31806181)	+	(GT)n	Simple_repeat	1	33	(0)	3258413
16	12.8	5.7	0.0	chr5	149732079	149732102	(31806157)	+	(GC)n	Simple_repeat	1	26	(0)	3258414
245	29.6	5.4	4.3	chr5	150483507	150483598	(31054661)	+	MER5A	DNA/hAT-Charlie	68	160	(29)	3260066
2065	10.5	2.1	0.0	chr5	150483623	150483898	(31054361)	C	AluYh3a3	SINE/Alu	(10)	282	1	3260067
11	18.1	2.4	4.8	chr5	154446098	154446138	(27092121)	+	G-rich	Low_complexity	1	42	(0)	3267171
16	20.4	2.6	7.5	chr5	154446374	154446451	(27091808)	+	G-rich	Low_complexity	1	80	(0)	3267172
12	15.3	3.5	0.0	chr5	154446645	154446673	(27091586)	+	(CCG)n	Simple_repeat	1	30	(0)	3267173
2035	18.4	2.0	1.5	chr5	154508637	154509028	(27029231)	+	MSTD	LTR/ERVL-MaLR	3	396	(0)	3267305
771	29.0	9.8	4.0	chr5	154509029	154509628	(27028631)	C	L2b	LINE/L2	(28)	3347	2695	3267304
1679	23.6	3.0	3.0	chr5	154654886	154655345	(26882914)	C	L1ME1	LINE/L1	(0)	6179	5720	3267695
230	30.5	5.2	9.2	chr5	157547112	157547300	(23990959)	C	MIR3	SINE/MIR	(51)	217	50	3272901
1594	20.6	9.3	1.4	chr5	157547305	157547668	(23990591)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3272902
1464	24.2	3.0	3.3	chr5	161670901	161671297	(19866962)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3280035
1030	21.9	7.9	4.4	chr5	162976183	162976566	(18561693)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	3281855
50	0.0	0.0	0.0	chr5	164608684	164608728	(16929531)	+	(TATT)n	Simple_repeat	1	45	(0)	3284222
2032	14.5	0.3	0.0	chr5	164608731	164609013	(16929246)	C	AluSx	SINE/Alu	(28)	284	1	3284223
1408	20.5	12.6	1.7	chr5	167320502	167320853	(14217406)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3288150
27	13.3	0.0	0.0	chr5	168844516	168844557	(12693702)	+	(CA)n	Simple_repeat	1	42	(0)	3290828
14	6.8	9.7	0.0	chr5	170504036	170504066	(11034193)	+	(GCAG)n	Simple_repeat	1	34	(0)	3293733
1673	17.9	13.4	0.9	chr5	171279275	171279618	(10258641)	C	MSTD	LTR/ERVL-MaLR	(2)	394	1	3294958
201	34.6	4.9	0.0	chr5	171279623	171279700	(10258559)	C	MIRc	SINE/MIR	(25)	243	162	3294959
961	19.1	7.2	4.1	chr5	172131787	172132142	(9406117)	+	MSTD	LTR/ERVL-MaLR	5	395	(1)	3296755
1112	15.3	1.7	0.0	chr5	172324014	172324189	(9214070)	C	MSTD	LTR/ERVL-MaLR	(0)	396	218	3297188
1884	11.9	1.4	0.7	chr5	172324222	172324500	(9213759)	+	MSTA	LTR/ERVL-MaLR	133	413	(15)	3297189
7196	7.4	14.7	1.6	chr5	172401605	172402672	(9135587)	+	MER11B	LTR/ERVK	1	1232	(4)	3297345
2078	9.2	4.1	1.1	chr5	172601449	172601758	(8936501)	C	AluSx1	SINE/Alu	(0)	312	1	3297806
384	32.4	8.0	11.3	chr5	172601759	172601965	(8936294)	C	MLT1K	LTR/ERVL-MaLR	(202)	393	194	3297805
4506	17.4	1.8	3.3	chr5	174269591	174270402	(7267857)	+	L1MB2	LINE/L1	4858	5647	(524)	3301184
1223	25.1	10.5	0.8	chr5	174270403	174270756	(7267503)	C	MSTD	LTR/ERVL-MaLR	(2)	394	3	3301185
703	29.9	9.7	2.4	chr5	174654372	174654744	(6883515)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	9	3301936
1633	15.2	16.4	1.2	chr5	174654750	174655094	(6883165)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	3301937
443	33.0	9.1	4.6	chr5	174655129	174655494	(6882765)	+	L2c	LINE/L2	2918	3301	(86)	3301938
2163	9.3	0.0	4.6	chr5	174740862	174741163	(6797096)	C	AluSx3	SINE/Alu	(23)	288	1	3302131
2589	6.4	0.0	0.3	chr5	176989899	176990210	(4548049)	+	AluY	SINE/Alu	1	311	(0)	3306348
1557	21.0	5.0	3.4	chr5	176990211	176990482	(4547777)	+	MLT1A0	LTR/ERVL-MaLR	86	363	(2)	3306347
73	1.2	3.6	1.1	chr5	177371042	177371125	(4167134)	+	(GGGCCG)n	Simple_repeat	1	87	(0)	3307276
1849	18.8	7.1	0.5	chr5	178448437	178448805	(3089454)	C	MSTD	LTR/ERVL-MaLR	(1)	395	1	3309191
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
15	13.9	0.0	0.0	chr5	178627215	178627238	(2911021)	+	(C)n	Simple_repeat	1	24	(0)	3309511
19	9.8	0.0	2.9	chr5	179550513	179550547	(1987712)	+	(GCCC)n	Simple_repeat	1	35	(0)	3311065
24	26.9	0.0	0.0	chr5	179550600	179550667	(1987592)	+	G-rich	Low_complexity	1	68	(0)	3311066
13	15.7	9.3	0.0	chr5	179550804	179550846	(1987413)	+	(GCGCGCT)n	Simple_repeat	1	47	(0)	3311067
325	19.3	0.0	7.4	chr5	179906781	179906875	(1631384)	+	MER102b	DNA/hAT-Charlie	121	208	(133)	3311775
2296	8.3	1.3	0.7	chr5	179908281	179908580	(1629679)	C	AluSx1	SINE/Alu	(10)	302	1	3311777
760	22.0	9.2	2.7	chr5	180090027	180090173	(1448086)	C	MER96B	DNA/hAT	(236)	181	32	3312064
47	0.0	0.0	2.1	chr5	180209105	180209151	(1329108)	+	(CGC)n	Simple_repeat	1	47	(0)	3312243
2061	13.6	9.2	3.5	chr5	180294912	180295309	(1242950)	+	MSTC	LTR/ERVL-MaLR	6	428	(0)	3312369
2276	12.1	10.8	1.6	chr6	448273	448659	(170357320)	+	MSTC	LTR/ERVL-MaLR	1	427	(1)	3314828
13	14.4	5.0	2.4	chr6	692814	692853	(170113126)	+	G-rich	Low_complexity	1	42	(0)	3315113
13	12.7	0.0	0.0	chr6	693188	693213	(170112766)	+	(AGGGG)n	Simple_repeat	1	26	(0)	3315114
192	34.3	2.9	2.9	chr6	757657	757761	(170048218)	+	Tigger19b	DNA/TcMar-Tigger	432	536	(14)	3315195
1693	19.3	10.9	0.0	chr6	1286756	1287108	(169518871)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3315890
1739	11.4	0.0	0.0	chr6	1551030	1551257	(169254722)	+	AluSc	SINE/Alu	65	292	(17)	3316312
365	16.3	2.4	16.9	chr6	1551258	1551339	(169254640)	+	Charlie2b	DNA/hAT-Charlie	2721	2781	(1)	3316311
342	27.4	1.2	0.0	chr6	1551452	1551535	(169254444)	+	ERVL-E-int	LTR/ERVL	1945	2029	(3638)	3316313
186	22.0	3.9	0.0	chr6	1551538	1551587	(169254392)	C	MamRTE1	LINE/RTE-BovB	(1641)	2171	2120	3316314
15	25.2	4.3	2.8	chr6	2245428	2245498	(168560481)	+	(GGCG)n	Simple_repeat	1	72	(0)	3317164
187	26.3	2.5	1.6	chr6	2468021	2468616	(168337363)	+	GA-rich	Low_complexity	1	611	(0)	3317480
829	20.4	20.1	5.1	chr6	3656598	3656912	(167149067)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	3319241
797	30.0	13.7	3.5	chr6	3656939	3657480	(167148499)	C	MLT1L	LTR/ERVL-MaLR	(4)	606	1	3319242
1888	18.5	2.8	6.8	chr6	3837584	3837994	(166967985)	C	MSTD	LTR/ERVL-MaLR	(2)	394	1	3319518
1880	15.4	0.7	2.6	chr6	7001884	7002195	(163803784)	C	AluJb	SINE/Alu	(6)	306	1	3324374
1326	13.3	4.1	0.0	chr6	7002196	7002406	(163803573)	C	MLT1C	LTR/ERVL-MaLR	(233)	234	15	3324370
2470	12.2	2.1	9.5	chr6	7636767	7637012	(163168967)	C	MSTC	LTR/ERVL-MaLR	(0)	428	182	3325497
2275	11.2	0.0	0.3	chr6	7637013	7637317	(163168662)	+	AluSc8	SINE/Alu	1	304	(7)	3325498
2871	12.5	0.7	2.3	chr6	7658890	7659323	(163146656)	C	MSTC	LTR/ERVL-MaLR	(0)	428	2	3325531
1804	17.8	4.7	0.9	chr6	7900610	7900955	(162905024)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	6	3325879
301	29.2	7.0	5.4	chr6	7941354	7941431	(162864548)	+	L2c	LINE/L2	3270	3355	(32)	3325925
2874	13.0	0.7	2.5	chr6	7941432	7941864	(162864115)	C	MSTC	LTR/ERVL-MaLR	(3)	425	1	3325926
7554	3.5	0.3	0.0	chr6	9588415	9589832	(161216147)	+	L1PA4	LINE/L1	4729	6150	(5)	3328301
974	20.3	14.3	2.6	chr6	9589837	9590144	(161215835)	C	MLT1A1	LTR/ERVL-MaLR	(58)	350	1	3328302
18	27.0	0.0	0.0	chr6	10412177	10412229	(160393750)	+	(GAGC)n	Simple_repeat	1	53	(0)	3329448
14	26.4	5.1	0.0	chr6	10412300	10412358	(160393621)	+	A-rich	Low_complexity	1	62	(0)	3329449
54	31.0	3.2	1.8	chr6	10412302	10412397	(160393582)	+	GA-rich	Low_complexity	1	269	(0)	3329450
31	26.7	2.9	5.7	chr6	10412398	10412567	(160393412)	+	G-rich	Low_complexity	1	175	(0)	3329451
745	25.3	19.9	1.3	chr6	11964815	11964967	(158841012)	C	L2	LINE/L2	(1283)	2136	1948	3331993
1539	19.3	12.4	1.1	chr6	11964968	11965318	(158840661)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3331994
745	25.3	19.9	1.3	chr6	11965319	11965612	(158840367)	C	L2	LINE/L2	(1472)	1947	1585	3331993
1619	19.2	9.1	2.2	chr6	13807953	13808319	(156997660)	+	MSTD	LTR/ERVL-MaLR	2	396	(0)	3334949
996	18.8	5.2	6.5	chr6	13825804	13825976	(156980003)	+	MER33	DNA/hAT-Charlie	38	222	(102)	3334987
1969	17.8	8.2	0.0	chr6	13825977	13826336	(156979643)	C	MSTD	LTR/ERVL-MaLR	(2)	394	3	3334988
361	25.1	7.3	2.2	chr6	14693791	14693973	(156112006)	+	MLT1J	LTR/ERVL-MaLR	384	608	(2)	3336399
2499	9.0	0.0	0.0	chr6	15140213	15140522	(155665457)	+	AluSz	SINE/Alu	1	310	(2)	3337341
1285	23.4	4.2	10.8	chr6	15140584	15140991	(155664988)	C	MSTD	LTR/ERVL-MaLR	(0)	396	17	3337342
542	22.9	13.4	1.7	chr6	15760121	15760343	(155045636)	C	MIRb	SINE/MIR	(0)	268	15	3338393
2435	9.0	0.3	0.0	chr6	15760492	15760803	(155045176)	C	AluSq2	SINE/Alu	(0)	313	1	3338394
1701	7.7	2.7	1.4	chr6	17200187	17200445	(153605534)	C	AluSx1	SINE/Alu	(0)	312	58	3340711
5881	12.9	11.6	14.7	chr6	17200446	17201745	(153604234)	+	LTR12D	LTR/ERV1	1	1254	(0)	3340712
13	15.4	5.3	2.5	chr6	17393473	17393510	(153412469)	+	(CCT)n	Simple_repeat	1	40	(0)	3341078
14	19.8	1.7	6.7	chr6	17393641	17393699	(153412280)	+	G-rich	Low_complexity	1	60	(0)	3341079
15	30.2	1.6	0.0	chr6	17393764	17393824	(153412155)	+	G-rich	Low_complexity	1	62	(0)	3341080
12	14.1	7.3	2.3	chr6	17600548	17600588	(153205391)	+	G-rich	Low_complexity	1	44	(0)	3341453
16	10.4	0.0	5.7	chr6	17987184	17987218	(152818761)	+	(CCGC)n	Simple_repeat	1	35	(0)	3342184
5026	14.5	19.7	1.5	chr6	18018891	18019879	(152786100)	C	LTR12C	LTR/ERV1	(4)	1575	362	3342269
6249	17.1	17.5	1.1	chr6	18019880	18021181	(152784798)	+	LTR12C	LTR/ERV1	3	1562	(17)	3342270
2002	13.6	12.4	2.6	chr6	21077422	21077806	(149728173)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3347081
2552	15.7	7.7	1.5	chr6	21077807	21078200	(149727779)	+	MLT1D	LTR/ERVL-MaLR	80	505	(0)	3347080
1450	18.5	14.1	0.3	chr6	22365748	22366088	(148439891)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3349181
2783	24.1	12.0	8.0	chr6	24799275	24799944	(146006035)	+	L2a	LINE/L2	1497	2268	(1151)	3352583
1939	16.8	2.6	0.0	chr6	24799945	24800248	(146005731)	C	AluJb	SINE/Alu	(0)	312	1	3352584
812	20.4	13.1	2.8	chr6	25361635	25361940	(145444039)	+	MSTC	LTR/ERVL-MaLR	1	368	(60)	3353523
24	18.1	0.0	0.0	chr6	25361962	25362005	(145443974)	+	A-rich	Low_complexity	1	44	(0)	3353524
331	16.7	0.0	0.0	chr6	25362028	25362081	(145443898)	+	MSTC	LTR/ERVL-MaLR	342	395	(1)	3353523
1662	20.1	7.8	2.1	chr6	26655610	26655981	(144149998)	+	MSTD	LTR/ERVL-MaLR	1	395	(1)	3355626
2176	12.4	4.9	4.9	chr6	27030107	27030382	(143775597)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	111	3356171
2215	9.9	0.3	0.7	chr6	27030383	27030674	(143775305)	C	AluSx1	SINE/Alu	(21)	291	1	3356172
2178	12.1	1.0	0.3	chr6	27894136	27894440	(142911539)	C	AluSg4	SINE/Alu	(3)	307	1	3357785
13	22.5	2.0	3.9	chr6	30345413	30345462	(140460517)	+	G-rich	Low_complexity	1	51	(0)	3361461
16	20.9	0.0	0.0	chr6	30345612	30345644	(140460335)	+	G-rich	Low_complexity	1	33	(0)	3361462
19	14.4	0.0	0.0	chr6	30571118	30571148	(140234831)	+	(A)n	Simple_repeat	1	31	(0)	3361824
12	30.0	0.0	4.8	chr6	30720277	30720338	(140085641)	+	(CCCG)n	Simple_repeat	1	62	(0)	3362083
1163	22.4	10.1	0.9	chr6	31058256	31058580	(139747399)	+	Charlie13b	DNA/hAT-Charlie	155	512	(0)	3362717
847	19.3	10.1	2.2	chr6	31214801	31215106	(139590873)	C	MSTD	LTR/ERVL-MaLR	(8)	388	8	3363033
14	19.8	2.3	2.3	chr6	31795863	31795905	(139010074)	+	(CGCAGGA)n	Simple_repeat	1	44	(0)	3363903
183	21.1	2.6	0.0	chr6	31796137	31796174	(139009805)	+	MIR3	SINE/MIR	109	147	(61)	3363904
1116	18.4	11.5	9.4	chr6	32683772	32684101	(138121878)	+	MLT1A0	LTR/ERVL-MaLR	28	365	(0)	3365240
264	32.1	0.0	2.4	chr6	33632988	33633070	(137172909)	+	MIRc	SINE/MIR	158	238	(30)	3366889
2581	15.7	0.2	0.5	chr6	33821841	33822237	(136983742)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3367171
296	30.4	4.7	4.6	chr6	33822238	33822291	(136983688)	+	MIR3	SINE/MIR	109	167	(101)	3367170
206	30.6	4.0	2.7	chr6	33822377	33822450	(136983529)	+	L3b	LINE/CR1	5154	5228	(4)	3367172
213	23.4	0.0	2.1	chr6	35318035	35318082	(135487897)	+	MIRc	SINE/MIR	122	168	(100)	3370117
9508	11.0	11.5	0.3	chr6	35908152	35909597	(134896382)	+	THE1D-int	LTR/ERVL-MaLR	3	1631	(0)	3371418
1993	11.3	7.1	6.1	chr6	35909598	35909974	(134896005)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	3371418
2344	9.5	0.0	0.0	chr6	36454348	36454641	(134351338)	C	AluSx	SINE/Alu	(18)	294	1	3372554
2023	12.1	0.7	3.6	chr6	36454642	36454947	(134351032)	C	AluSx1	SINE/Alu	(15)	297	1	3372555
2451	6.1	0.0	0.3	chr6	37138462	37138756	(133667223)	+	AluYm1	SINE/Alu	1	294	(17)	3374051
241	24.5	4.6	0.0	chr6	37139049	37139119	(133666860)	C	X7C_LINE	LINE/CR1	(112)	155	47	3374052
2319	12.2	0.0	0.0	chr6	38635132	38635435	(132170544)	C	AluSz	SINE/Alu	(8)	304	1	3376676
798	17.6	0.0	7.6	chr6	38635436	38635478	(132170501)	+	MER5A	DNA/hAT-Charlie	148	188	(1)	3376675
1409	17.4	12.8	1.0	chr6	38635475	38635800	(132170179)	+	MSTD	LTR/ERVL-MaLR	1	404	(24)	3376677
2040	17.1	11.1	0.0	chr6	40709645	40709996	(130095983)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3379960
245	20.0	2.0	0.0	chr6	41705811	41705860	(129100119)	+	MamTip2	DNA/hAT-Tip100	46	96	(209)	3381652
213	32.7	1.0	3.7	chr6	41705867	41705974	(129100005)	+	MamTip2	DNA/hAT-Tip100	170	274	(31)	3381653
3759	12.4	0.2	0.0	chr6	41838228	41838765	(128967214)	+	L1PBa	LINE/L1	1222	1760	(5103)	3381911
1608	16.4	8.1	0.3	chr6	42309777	42310062	(128495917)	C	AluJb	SINE/Alu	(2)	310	1	3382987
716	15.6	3.0	8.6	chr6	42310063	42310103	(128495876)	C	MER3	DNA/hAT-Charlie	(67)	142	108	3382986
1012	16.1	0.0	1.2	chr6	42310104	42310264	(128495715)	C	AluJo	SINE/Alu	(14)	298	140	3382988
16	0.0	0.0	0.0	chr6	42781779	42781795	(128024184)	+	(A)n	Simple_repeat	1	17	(0)	3384021
26	17.3	0.0	0.0	chr6	42781975	42782050	(128023929)	+	(CCCCCG)n	Simple_repeat	1	76	(0)	3384022
30	26.8	4.2	1.6	chr6	43369433	43369552	(127436427)	+	(CGC)n	Simple_repeat	1	125	(0)	3385201
13	14.9	5.1	2.4	chr6	45377470	45377508	(125428471)	+	(CAGCC)n	Simple_repeat	1	41	(0)	3388537
14	13.7	3.1	0.0	chr6	45377643	45377674	(125428305)	+	G-rich	Low_complexity	1	33	(0)	3388538
14	18.6	2.7	0.0	chr6	46042368	46042404	(124763575)	+	(TTGTTT)n	Simple_repeat	1	38	(0)	3389620
1668	19.6	7.7	0.6	chr6	49539403	49539762	(121266217)	+	MSTD	LTR/ERVL-MaLR	1	388	(8)	3394517
28	3.0	0.0	2.8	chr6	49539795	49539830	(121266149)	+	(AAAT)n	Simple_repeat	1	36	(0)	3394518
1050	19.2	8.6	3.9	chr6	52218488	52218829	(118587150)	+	MSTC	LTR/ERVL-MaLR	28	428	(0)	3398161
5439	25.6	7.5	3.7	chr6	52218831	52220495	(118585484)	+	MSTC-int	LTR/ERVL-MaLR	1	1735	(0)	3398161
14	13.8	2.9	2.8	chr6	52664740	52664774	(118141205)	+	(TCCC)n	Simple_repeat	1	36	(0)	3398909
19	7.2	0.0	0.0	chr6	53544648	53544676	(117261303)	+	(CCT)n	Simple_repeat	1	29	(0)	3400325
12	23.5	2.5	0.0	chr6	53544953	53544992	(117260987)	+	(GCGGCG)n	Simple_repeat	1	41	(0)	3400326
11737	16.6	3.5	3.3	chr6	54178243	54182605	(116623374)	C	L1MA2	LINE/L1	(2819)	4746	15	3401284
1326	21.1	14.5	1.5	chr6	54674195	54674536	(116131443)	+	MSTD	LTR/ERVL-MaLR	3	396	(0)	3401938
1672	23.6	1.5	1.0	chr6	66041769	66042162	(104763817)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3413835
10429	13.0	0.9	0.3	chr6	66208135	66209705	(104596274)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3414000
2045	18.9	3.0	0.3	chr6	70832537	70832919	(99973060)	C	MSTD	LTR/ERVL-MaLR	(2)	394	1	3419812
2279	16.8	1.8	1.5	chr6	71006121	71006513	(99799466)	C	MSTD	LTR/ERVL-MaLR	(2)	394	1	3420003
13148	19.4	3.3	1.5	chr6	71006514	71007331	(99798648)	C	L1MA9	LINE/L1	(1492)	6067	5209	3420002
3122	14.6	1.6	9.7	chr6	71644844	71645202	(99160777)	C	L1MA7	LINE/L1	(326)	5965	5647	3420871
1193	18.9	1.0	0.0	chr6	71645204	71645404	(99160575)	C	MSTD	LTR/ERVL-MaLR	(0)	396	194	3420873
1240	25.1	11.4	0.0	chr6	71763282	71763632	(99042347)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3421043
1385	16.2	16.9	5.6	chr6	71870709	71871067	(98934912)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	3421145
39	4.7	0.0	0.0	chr6	73263040	73263084	(97542895)	+	(GGC)n	Simple_repeat	1	45	(0)	3423001
40	0.0	0.0	0.0	chr6	75208125	75208168	(95597811)	+	(TC)n	Simple_repeat	1	44	(0)	3425883
70	0.0	0.0	0.0	chr6	75208169	75208228	(95597751)	+	(TG)n	Simple_repeat	1	60	(0)	3425884
489	27.5	7.3	0.0	chr6	76759747	76759924	(94046055)	+	HAL1	LINE/L1	1433	1624	(883)	3428055
1898	17.5	5.5	1.7	chr6	76759925	76760303	(94045676)	C	MSTD	LTR/ERVL-MaLR	(0)	396	11	3428063
3834	18.0	6.2	1.8	chr6	76760320	76761095	(94044884)	C	MER21B	LTR/ERVL	(54)	814	3	3428064
11113	2.2	0.0	0.3	chr6	76875760	76877075	(93928904)	C	L1HS	LINE/L1	(4720)	1312	1	3428182
780	21.7	1.9	0.0	chr6	76877107	76877258	(93928721)	C	LTR41B	LTR/ERVL	(598)	160	6	3428181
529	19.2	2.0	1.0	chr6	80230502	80230601	(90575378)	C	MER58B	DNA/hAT-Charlie	(2)	339	239	3432383
1428	21.6	7.7	3.5	chr6	80230604	80230977	(90575002)	C	MSTD	LTR/ERVL-MaLR	(0)	396	6	3432384
1974	18.0	4.1	0.8	chr6	87056208	87056588	(83749391)	C	MSTD	LTR/ERVL-MaLR	(0)	396	3	3440974
2149	14.9	7.5	1.0	chr6	90020254	90020653	(80785326)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	3445794
1778	17.4	0.6	3.0	chr6	90663077	90663413	(80142566)	+	MSTD	LTR/ERVL-MaLR	68	396	(0)	3446702
767	31.3	15.0	4.7	chr6	90663426	90663854	(80142125)	C	L3	LINE/CR1	(96)	4003	3523	3446704
1476	24.3	5.6	0.3	chr6	92057127	92057501	(78748478)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3448453
242	27.7	5.4	1.6	chr6	92873454	92873589	(77932390)	C	L1ME3G	LINE/L1	(684)	5470	5345	3449410
1954	19.4	4.6	2.1	chr6	92873610	92873940	(77932039)	+	MSTD	LTR/ERVL-MaLR	8	354	(42)	3449411
2278	12.0	1.4	0.8	chr6	92873941	92874293	(77931686)	+	THE1A	LTR/ERVL-MaLR	1	355	(0)	3449412
2297	8.9	0.0	0.0	chr6	94687890	94688171	(76117808)	+	AluY	SINE/Alu	1	282	(29)	3451636
28	0.0	0.0	0.0	chr6	94688172	94688198	(76117781)	+	(AAAT)n	Simple_repeat	1	27	(0)	3451637
15	17.6	0.0	4.8	chr6	95577454	95577495	(75228484)	+	(GCCCC)n	Simple_repeat	1	42	(0)	3452635
206	38.8	10.4	1.6	chr6	98961415	98961668	(71844311)	C	L2c	LINE/L2	(5)	3382	3104	3456923
1553	17.5	16.2	1.5	chr6	98961723	98962059	(71843920)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3456924
2006	16.5	3.5	1.6	chr6	99835351	99835738	(70970241)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3458207
252	31.2	14.3	2.7	chr6	99835739	99835827	(70970152)	C	L4_C_Mam	LINE/RTE-X	(736)	4205	4098	3458206
13	20.8	0.0	0.0	chr6	100881277	100881309	(69924670)	+	(CAGA)n	Simple_repeat	1	33	(0)	3459593
15	9.3	7.8	5.5	chr6	100881405	100881455	(69924524)	+	(CCTCCG)n	Simple_repeat	1	55	(0)	3459594
1777	16.3	13.4	0.0	chr6	101078889	101079231	(69726748)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3459834
1713	19.5	2.3	6.5	chr6	103352498	103352909	(67453070)	C	MSTD	LTR/ERVL-MaLR	(0)	396	3	3462638
1444	30.9	5.1	1.4	chr6	105051742	105052281	(65753698)	C	L2a	LINE/L2	(0)	3426	2860	3464863
1572	21.8	7.6	0.9	chr6	105052282	105052614	(65753365)	C	MSTD	LTR/ERVL-MaLR	(0)	396	40	3464864
3332	24.6	7.6	2.3	chr6	105052622	105053382	(65752597)	C	L1MEf	LINE/L1	(2727)	3592	2757	3464865
720	17.4	15.1	2.5	chr6	107302756	107302997	(63502982)	+	MER33	DNA/hAT-Charlie	11	288	(36)	3468639
1266	20.8	13.6	2.6	chr6	107303001	107303351	(63502628)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3468640
889	26.7	5.3	4.5	chr6	107303404	107303893	(63502086)	C	L1ME3G	LINE/L1	(110)	814	321	3468641
181	24.6	0.0	3.4	chr6	109691574	109691632	(61114347)	+	OldhAT1	DNA/hAT-Ac	1898	1954	(894)	3472534
626	24.2	6.0	6.4	chr6	110027622	110027757	(60778222)	+	L4_A_Mam	LINE/RTE-X	4693	4832	(158)	3473044
1688	18.2	9.1	3.2	chr6	110027758	110028127	(60777852)	C	MSTD	LTR/ERVL-MaLR	(2)	394	1	3473045
626	24.2	6.0	6.4	chr6	110028128	110028272	(60777707)	+	L4_A_Mam	LINE/RTE-X	4833	4973	(17)	3473044
2717	3.3	0.0	0.7	chr6	110599371	110599675	(60206304)	+	AluYk4	SINE/Alu	1	303	(8)	3473931
2330	13.6	3.3	4.7	chr6	110599676	110599981	(60205998)	+	MSTD	LTR/ERVL-MaLR	101	396	(0)	3473930
15	27.4	0.0	0.0	chr6	111259600	111259647	(59546332)	+	(AGGCGG)n	Simple_repeat	1	48	(0)	3475317
456	22.7	4.3	2.1	chr6	111259722	111259858	(59546121)	+	MIRc	SINE/MIR	15	156	(74)	3475318
1498	20.4	10.9	0.3	chr6	113153443	113153740	(57652239)	+	MSTD	LTR/ERVL-MaLR	1	338	(58)	3478045
1959	13.1	0.0	0.7	chr6	113153741	113154014	(57651965)	C	AluSx	SINE/Alu	(8)	304	33	3478046
1614	21.2	2.3	7.0	chr6	113601464	113601879	(57204100)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3478735
821	30.1	13.6	2.5	chr6	113601880	113601937	(57204042)	+	L2a	LINE/L2	3354	3417	(9)	3478734
203	24.0	3.9	0.0	chr6	113601910	113601959	(57204020)	C	L2a	LINE/L2	(0)	3426	3375	3478736
1379	21.8	9.6	4.0	chr6	114292175	114292547	(56513432)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3479908
30	0.0	0.0	0.0	chr6	114342421	114342448	(56463531)	+	(GGC)n	Simple_repeat	1	28	(0)	3479980
11	21.0	2.5	2.4	chr6	114342591	114342630	(56463349)	+	(GCCGGA)n	Simple_repeat	1	41	(0)	3479981
2180	18.0	1.0	1.5	chr6	116129342	116129735	(54676244)	+	MSTD	LTR/ERVL-MaLR	1	392	(4)	3482165
4130	23.3	12.0	13.7	chr6	116129736	116131674	(54674305)	C	L1MC5	LINE/L1	(450)	8854	7069	3482164
305	27.8	12.9	8.8	chr6	118651557	118651749	(52154230)	C	L1M4b	LINE/L1	(6265)	602	401	3485446
600	34.7	5.8	3.3	chr6	119185187	119185498	(51620481)	+	L3	LINE/CR1	2986	3311	(788)	3486259
2029	8.6	0.0	2.6	chr6	119185577	119185843	(51620136)	C	AluY	SINE/Alu	(12)	299	40	3486261
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
1710	21.9	5.9	0.6	chr6	119883823	119884175	(50921804)	+	MSTD	LTR/ERVL-MaLR	24	396	(0)	3487145
709	29.6	5.5	5.8	chr6	120431574	120431899	(50374080)	+	L1MDa	LINE/L1	170	494	(6139)	3487798
1518	18.7	11.2	0.3	chr6	120431918	120432228	(50373751)	+	LTR2752	LTR/ERV1	915	1263	(0)	3487800
1867	13.5	8.4	1.1	chr6	121177911	121178263	(49627716)	C	THE1D	LTR/ERVL-MaLR	(0)	381	1	3488630
623	30.5	4.8	12.5	chr6	121178264	121178526	(49627453)	C	L2a	LINE/L2	(489)	2930	2682	3488625
17	9.1	0.0	0.0	chr6	121437355	121437378	(49368601)	+	(T)n	Simple_repeat	1	24	(0)	3488990
1861	18.8	11.4	0.3	chr6	122868427	122868778	(47937201)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3490990
1505	20.7	3.1	2.5	chr6	122870243	122870564	(47935415)	+	MSTD	LTR/ERVL-MaLR	73	396	(0)	3490993
6670	24.1	5.7	2.8	chr6	122870567	122871118	(47934861)	+	MSTD-int	LTR/ERVL-MaLR	2	578	(1157)	3490993
610	29.1	6.5	0.5	chr6	124812372	124812575	(45993404)	C	L2a	LINE/L2	(5)	3421	3205	3493433
253	35.3	0.0	9.2	chr6	124838210	124838238	(45967741)	+	MIR3	SINE/MIR	72	100	(108)	3493465
2834	8.6	1.1	0.0	chr6	124838239	124838609	(45967370)	+	THE1C	LTR/ERVL-MaLR	1	375	(0)	3493466
3829	14.8	3.8	0.9	chr6	125433662	125434351	(45371628)	C	MER50	LTR/ERV1	(23)	711	1	3494323
663	19.9	3.4	4.1	chr6	125448545	125448691	(45357288)	C	MSTD	LTR/ERVL-MaLR	(0)	396	251	3494349
738	20.3	4.5	0.0	chr6	125542116	125542263	(45263716)	C	MLT1B	LTR/ERVL-MaLR	(235)	155	1	3494474
1356	18.6	11.9	11.2	chr6	125542286	125542678	(45263301)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3494475
214	32.6	10.6	5.2	chr6	125826634	125826726	(44979253)	C	L2a	LINE/L2	(36)	3390	3291	3494878
1992	20.5	1.3	3.0	chr6	125826727	125826915	(44979064)	C	MSTD	LTR/ERVL-MaLR	(0)	396	219	3494879
2260	9.6	3.5	0.3	chr6	125826916	125827216	(44978763)	+	AluSp	SINE/Alu	1	311	(2)	3494880
3804	14.1	4.8	2.6	chr6	126979103	126979223	(43826756)	+	MER39	LTR/ERV1	1	132	(575)	3496268
2943	2.2	0.0	0.0	chr6	126979224	126979539	(43826440)	C	AluYb8	SINE/Alu	(2)	316	1	3496269
15	10.1	2.9	2.9	chr6	127266776	127266809	(43539170)	+	G-rich	Low_complexity	1	35	(0)	3496650
1971	13.9	11.2	4.8	chr6	127353348	127353701	(43452278)	C	MSTC	LTR/ERVL-MaLR	(0)	428	45	3496775
2437	8.6	0.0	0.3	chr6	127353702	127354002	(43451977)	+	AluY	SINE/Alu	1	300	(11)	3496776
262	34.6	1.8	4.5	chr6	128806047	128806158	(41999821)	C	MLT1L	LTR/ERVL-MaLR	(208)	402	294	3498666
992	19.1	21.8	2.1	chr6	128806219	128806544	(41999435)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	3498667
1419	18.4	13.9	1.6	chr6	128989730	128990043	(41815936)	C	MLT1A0	LTR/ERVL-MaLR	(4)	361	3	3498892
1049	7.4	0.0	0.0	chr6	130183245	130183365	(40622614)	+	AluSg7	SINE/Alu	188	308	(1)	3500554
54	32.7	1.9	1.9	chr6	130183744	130184001	(40621978)	+	GA-rich	Low_complexity	1	263	(0)	3500555
770	13.6	7.7	0.0	chr6	133235544	133235675	(37570304)	+	MSTC	LTR/ERVL-MaLR	286	428	(0)	3504970
1761	16.9	10.3	0.8	chr6	133601577	133601934	(37204045)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3505452
13	11.6	2.2	8.7	chr6	134174939	134174983	(36630996)	+	(GCCTC)n	Simple_repeat	1	46	(0)	3506324
11	21.2	6.8	0.0	chr6	134175662	134175705	(36630274)	+	G-rich	Low_complexity	1	47	(0)	3506325
16	20.2	5.8	4.1	chr6	134175874	134175942	(36630037)	+	GA-rich	Low_complexity	1	73	(0)	3506326
1315	19.6	20.0	1.6	chr6	135071078	135071398	(35734581)	C	MSTD	LTR/ERVL-MaLR	(0)	396	2	3507905
1945	19.9	0.8	3.0	chr6	135626528	135626932	(35179047)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3508719
19	0.0	0.0	0.0	chr6	136860410	136860430	(33945549)	+	(T)n	Simple_repeat	1	21	(0)	3510597
1932	1.8	0.9	0.0	chr6	136860451	136860678	(33945301)	+	L1PA4	LINE/L1	5926	6155	(0)	3510598
17	8.1	0.0	0.0	chr6	138107093	138107118	(32698861)	+	(GGC)n	Simple_repeat	1	26	(0)	3512465
24	16.1	7.0	1.3	chr6	138107346	138107416	(32698563)	+	(CGGAG)n	Simple_repeat	1	76	(0)	3512466
385	31.8	5.2	5.6	chr6	138107872	138108104	(32697875)	+	L2b	LINE/L2	3139	3370	(5)	3512467
350	34.3	6.8	1.4	chr6	138146432	138146638	(32659341)	C	L2	LINE/L2	(1159)	2260	2042	3512534
396	31.5	3.7	1.6	chr6	138146731	138146917	(32659062)	+	L2c	LINE/L2	3062	3252	(135)	3512535
1222	24.6	14.7	0.9	chr6	138752037	138752377	(32053602)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3513466
1601	20.9	9.1	2.2	chr6	138966939	138967305	(31838674)	+	MSTD	LTR/ERVL-MaLR	2	396	(0)	3513862
1448	19.2	1.9	11.1	chr6	140453145	140453351	(30352628)	+	AluJb	SINE/Alu	127	312	(0)	3516059
565	23.3	7.2	11.5	chr6	140453352	140453519	(30352460)	+	MLT1A1	LTR/ERVL-MaLR	59	213	(195)	3516058
407	15.6	0.0	2.5	chr6	140453526	140453604	(30352375)	+	MLT1A1	LTR/ERVL-MaLR	320	396	(0)	3516058
3680	19.7	3.2	0.2	chr6	140453636	140454529	(30351450)	C	L1MD1	LINE/L1	(2798)	3739	2779	3516055
1905	28.7	6.1	2.8	chr6	141296307	141297221	(29508758)	C	L1MEg2	LINE/L1	(855)	6599	5653	3517081
1029	23.9	15.4	3.5	chr6	141297228	141297574	(29508405)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3517082
1530	20.2	11.4	2.0	chr6	141489534	141489891	(29316088)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3517330
911	28.3	5.3	1.2	chr6	142531174	142531427	(28274552)	+	L2a	LINE/L2	2212	2476	(943)	3518637
844	22.3	24.1	0.7	chr6	142531428	142531713	(28274266)	C	MSTD	LTR/ERVL-MaLR	(19)	377	1	3518638
19	19.3	1.5	6.0	chr6	142946358	142946423	(27859556)	+	GA-rich	Low_complexity	1	67	(0)	3519180
1766	17.4	5.7	4.0	chr6	143070472	143070849	(27735130)	C	MSTD	LTR/ERVL-MaLR	(2)	394	10	3519350
2230	12.5	0.0	0.7	chr6	143213489	143213816	(27592163)	C	AluSx1	SINE/Alu	(0)	312	1	3519542
1956	18.3	3.6	0.3	chr6	144853726	144854104	(25951875)	+	MSTD	LTR/ERVL-MaLR	1	392	(4)	3521966
394	34.1	9.3	4.9	chr6	146227967	146228184	(24577795)	+	L4_C_Mam	LINE/RTE-X	4077	4300	(838)	3523766
1341	23.9	6.8	2.9	chr6	146228185	146228564	(24577415)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3523767
18	18.8	2.3	2.2	chr6	146489254	146489297	(24316682)	+	(TC)n	Simple_repeat	1	45	(0)	3524094
15	19.5	2.3	2.3	chr6	146858151	146858193	(23947786)	+	G-rich	Low_complexity	1	44	(0)	3524602
43	14.5	0.0	0.0	chr6	148343092	148343167	(22462812)	+	(CCGGAG)n	Simple_repeat	1	76	(0)	3526766
2268	16.6	1.3	2.7	chr6	149153288	149153689	(21652290)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3527978
249	23.2	0.9	0.0	chr6	149336051	149336116	(21469863)	+	MIR3	SINE/MIR	24	92	(176)	3528280
295	15.1	1.9	0.0	chr6	149336134	149336186	(21469793)	+	L2a	LINE/L2	3369	3422	(4)	3528281
13	9.7	5.7	2.7	chr6	149864264	149864298	(20941681)	+	(GCCCTGC)n	Simple_repeat	1	37	(0)	3529318
337	30.1	11.4	0.6	chr6	151294893	151295049	(19510930)	C	MER103C	DNA/hAT-Charlie	(55)	242	67	3531747
585	30.3	0.0	5.7	chr6	151781064	151781168	(19024811)	C	MIR3	SINE/MIR	(14)	194	91	3532618
1391	18.4	15.2	2.3	chr6	151781169	151781512	(19024467)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3532619
21	7.5	0.0	0.0	chr6	153298365	153298392	(17507587)	+	(TG)n	Simple_repeat	1	28	(0)	3534721
15	26.2	0.0	2.0	chr6	153298393	153298411	(17507568)	+	(CATGTG)n	Simple_repeat	3	49	(0)	3534722
264	12.8	0.0	2.1	chr6	153298419	153298466	(17507513)	+	MSTC	LTR/ERVL-MaLR	1	47	(349)	3534723
1118	16.7	8.5	3.8	chr6	153298471	153298706	(17507273)	+	MSTC	LTR/ERVL-MaLR	180	427	(1)	3534723
2219	14.4	4.0	7.0	chr6	153598502	153598887	(17207092)	C	MSTC	LTR/ERVL-MaLR	(0)	428	56	3535129
2629	13.1	3.2	0.0	chr6	154888219	154888614	(15917365)	C	MSTC	LTR/ERVL-MaLR	(19)	409	1	3537215
1713	19.1	5.3	2.3	chr6	155521162	155521510	(15284469)	+	MLT1A0	LTR/ERVL-MaLR	6	365	(0)	3538248
1248	18.8	18.3	2.9	chr6	155564150	155564489	(15241490)	+	MLT1A1	LTR/ERVL-MaLR	1	404	(4)	3538302
5631	13.4	3.6	1.2	chr6	155564490	155565158	(15240821)	C	L1MC1	LINE/L1	(450)	5883	5219	3538299
1477	17.7	12.9	0.9	chr6	155686515	155686862	(15119117)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3538444
270	20.2	2.8	14.8	chr6	157188645	157188766	(13617213)	+	L2a	LINE/L2	3312	3418	(8)	3540528
269	30.2	17.6	0.6	chr6	157716322	157716481	(13089498)	C	MIRb	SINE/MIR	(9)	259	67	3541338
390	27.4	9.3	0.0	chr6	158026287	158026432	(12779547)	+	MIR	SINE/MIR	24	184	(78)	3541844
270	33.3	8.0	2.7	chr6	158408484	158408708	(12397271)	C	MIR	SINE/MIR	(12)	250	13	3542484
19	25.5	1.1	6.6	chr6	158644770	158644859	(12161120)	+	(GCCCC)n	Simple_repeat	1	91	(0)	3542863
1934	17.6	8.3	1.1	chr6	159622740	159623106	(11182873)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3544328
5260	23.1	5.1	4.1	chr6	159944371	159945681	(10860298)	+	MSTD-int	LTR/ERVL-MaLR	2	1326	(409)	3544869
1054	18.1	1.0	8.1	chr6	159945680	159945889	(10860090)	+	MSTD	LTR/ERVL-MaLR	202	396	(0)	3544870
1044	24.8	3.4	4.3	chr6	159945892	159946219	(10859760)	C	ERV3-16A3_I-int	LTR/ERVL	(129)	5097	4773	3544871
1493	20.1	9.1	4.3	chr6	160975028	160975402	(9830577)	+	MSTD	LTR/ERVL-MaLR	2	396	(0)	3546023
409	33.1	3.6	9.2	chr6	161021320	161021765	(9784214)	+	L2c	LINE/L2	2922	3341	(46)	3546104
1908	14.8	6.1	8.4	chr6	161171254	161171608	(9634371)	C	MSTD	LTR/ERVL-MaLR	(0)	396	47	3546289
2322	9.5	0.0	3.5	chr6	161171609	161171925	(9634054)	+	AluY	SINE/Alu	2	307	(4)	3546290
312	22.0	6.8	3.5	chr6	161337773	161337885	(9468094)	+	MIR	SINE/MIR	86	202	(60)	3546523
866	21.5	6.2	3.2	chr6	162233670	162234011	(8571968)	+	MSTD	LTR/ERVL-MaLR	11	396	(0)	3547852
1566	22.7	2.9	4.1	chr6	164073842	164074237	(6731742)	C	MSTD	LTR/ERVL-MaLR	(2)	503	1	3550285
1932	18.8	2.1	1.8	chr6	165454382	165454765	(5351214)	+	MSTD	LTR/ERVL-MaLR	1	385	(11)	3551972
1086	28.4	2.4	3.8	chr6	165454769	165455141	(5350838)	+	ERVL-E-int	LTR/ERVL	1544	1911	(3756)	3551971
12	14.9	2.3	6.8	chr6	165662636	165662678	(5143301)	+	(GCCCGG)n	Simple_repeat	1	44	(0)	3552226
12	13.9	0.0	0.0	chr6	165663204	165663227	(5142752)	+	(GGC)n	Simple_repeat	1	24	(0)	3552227
19	12.2	4.2	4.0	chr6	165663262	165663309	(5142670)	+	(CGC)n	Simple_repeat	1	50	(0)	3552228
2019	17.5	2.4	1.6	chr6	165935633	165935998	(4869981)	+	MSTD	LTR/ERVL-MaLR	28	396	(0)	3552566
1151	19.8	7.6	3.8	chr6	166283291	166283557	(4522422)	+	MSTD	LTR/ERVL-MaLR	119	396	(0)	3553053
1939	19.3	1.1	2.8	chr6	167429706	167430095	(3375884)	+	MSTD	LTR/ERVL-MaLR	1	383	(13)	3554393
802	19.0	1.8	1.2	chr6	167430137	167430306	(3375673)	C	MLT1A	LTR/ERVL-MaLR	(203)	171	1	3554392
388	35.6	4.6	3.7	chr6	168614431	168615747	(2190232)	+	TAR1	Satellite/telo	1	1328	(552)	3555632
2171	14.0	1.0	0.0	chr6	168656236	168656567	(2149412)	+	AluSx	SINE/Alu	8	312	(0)	3555664
1569	22.7	8.8	0.0	chr6	168657603	168657963	(2148016)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3555665
1682	18.8	8.8	6.0	chr6	168764728	168765111	(2040868)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3555775
11	20.1	2.9	0.0	chr6	169702129	169702162	(1103817)	+	(TCCGGC)n	Simple_repeat	1	35	(0)	3556750
27	0.0	0.0	0.0	chr6	169702221	169702246	(1103733)	+	(CCCTGC)n	Simple_repeat	1	26	(0)	3556751
929	13.1	4.0	0.0	chr6	169752079	169752223	(1053756)	+	AluSc8	SINE/Alu	136	286	(25)	3556802
1988	16.2	9.8	1.1	chr6	169885209	169885569	(920410)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3556938
905	23.5	18.4	2.0	chr6	170047839	170048142	(757837)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	3557095
215	21.7	2.1	0.0	chr6	170264146	170264191	(541788)	+	MIR3	SINE/MIR	121	167	(41)	3557268
262	33.0	11.6	3.3	chr6	170307353	170307807	(498172)	C	L2b	LINE/L2	(81)	3294	2711	3557313
1196	23.4	5.7	0.0	chr6	170436428	170436756	(369223)	C	L1M5	LINE/L1	(2808)	3338	2990	3557435
332	28.3	12.2	3.2	chr6	170450086	170450271	(355708)	+	MIRb	SINE/MIR	44	248	(20)	3557442
2125	11.4	0.7	4.4	chr7	558035	558351	(158787622)	+	AluJr	SINE/Alu	4	308	(4)	3558504
833	10.5	0.0	0.0	chr7	813173	813277	(158532696)	+	AluSq2	SINE/Alu	207	311	(2)	3558948
724	25.7	0.8	7.2	chr7	1315853	1315953	(158030020)	+	Charlie5	DNA/hAT-Charlie	2536	2624	(0)	3559678
904	25.0	10.1	7.9	chr7	3330360	3330690	(156015283)	+	MSTD	LTR/ERVL-MaLR	3	358	(38)	3563150
1496	20.3	3.0	1.4	chr7	3330691	3330981	(156014992)	+	AluJr	SINE/Alu	1	296	(16)	3563151
1936	24.3	7.0	10.0	chr7	4326473	4326799	(155019174)	C	L1MB7	LINE/L1	(5389)	1251	900	3564575
832	16.4	1.5	0.0	chr7	4326806	4326939	(155019034)	C	MSTD	LTR/ERVL-MaLR	(47)	349	214	3564585
2095	8.6	1.1	0.0	chr7	4937970	4938308	(154407665)	C	AluSq2	SINE/Alu	(0)	313	1	3565852
1118	23.2	9.7	1.5	chr7	4938313	4938644	(154407329)	C	MSTC	LTR/ERVL-MaLR	(66)	362	1	3565853
2032	11.8	1.0	0.3	chr7	5123908	5124203	(154221770)	+	AluSx	SINE/Alu	1	298	(14)	3566287
2217	9.4	0.0	0.7	chr7	5124210	5124508	(154221465)	+	AluSp	SINE/Alu	1	297	(16)	3566288
2564	7.4	0.0	0.0	chr7	5269366	5269675	(154076298)	+	AluY	SINE/Alu	1	310	(1)	3566647
2237	10.9	5.8	0.9	chr7	5269678	5270020	(154075953)	C	MSTC	LTR/ERVL-MaLR	(67)	361	1	3566648
12	16.4	5.9	0.0	chr7	5423403	5423436	(153922537)	+	(CGGC)n	Simple_repeat	1	36	(0)	3566996
1931	15.7	1.0	0.3	chr7	5468593	5468898	(153877075)	C	AluJr	SINE/Alu	(2)	310	3	3567112
255	33.3	0.8	4.1	chr7	6447537	6447658	(152898315)	+	MIR	SINE/MIR	109	226	(36)	3569390
28	14.8	5.8	1.4	chr7	6484058	6484126	(152861847)	+	(GGC)n	Simple_repeat	1	73	(0)	3569479
1798	15.9	0.0	5.4	chr7	6484471	6484766	(152861207)	+	AluJo	SINE/Alu	1	282	(30)	3569480
1825	13.1	1.8	2.8	chr7	6683945	6684227	(152661746)	C	AluSz	SINE/Alu	(16)	296	17	3569939
1198	16.7	22.7	0.9	chr7	6684254	6684341	(152661632)	+	MSTC	LTR/ERVL-MaLR	2	134	(294)	3569940
28	5.8	0.0	0.0	chr7	6684342	6684377	(152661596)	+	(GTTAATGG)n	Simple_repeat	1	36	(0)	3569941
1198	16.7	22.7	0.9	chr7	6684378	6684621	(152661352)	+	MSTC	LTR/ERVL-MaLR	135	427	(1)	3569940
21	21.4	0.0	0.0	chr7	6700947	6700992	(152644981)	+	(CATT)n	Simple_repeat	1	46	(0)	3569964
952	18.1	0.0	0.0	chr7	6700993	6701141	(152644832)	C	AluJo	SINE/Alu	(27)	285	137	3569965
13	26.3	1.6	4.6	chr7	7968727	7968790	(151377183)	+	G-rich	Low_complexity	1	65	(0)	3571872
19	12.1	2.8	0.0	chr7	7968827	7968862	(151377111)	+	(GCG)n	Simple_repeat	1	37	(0)	3571873
309	30.2	10.4	6.4	chr7	7969024	7969225	(151376748)	C	L1M4b	LINE/L1	(6249)	618	408	3571874
958	23.2	4.5	3.7	chr7	10635136	10635486	(148710487)	C	MSTD	LTR/ERVL-MaLR	(0)	396	8	3575153
960	33.7	5.9	2.9	chr7	14849065	14849291	(144496682)	C	LTR33	LTR/ERVL	(7)	508	268	3580507
1113	21.1	17.4	1.2	chr7	14849292	14849631	(144496342)	+	MLT1A1	LTR/ERVL-MaLR	2	408	(0)	3580508
960	33.7	5.9	2.9	chr7	14849632	14849895	(144496078)	C	LTR33	LTR/ERVL	(248)	267	1	3580507
1737	14.7	5.6	5.8	chr7	15340014	15340374	(144005599)	C	Tigger4b	DNA/TcMar-Tigger	(0)	361	2	3581124
4239	13.7	0.9	0.5	chr7	15340456	15341116	(144004857)	+	THE1-int	LTR/ERVL-MaLR	622	1285	(295)	3581125
495	30.5	2.5	4.8	chr7	15410860	15410930	(143935043)	C	MIR	SINE/MIR	(33)	229	163	3581234
1447	24.7	3.3	2.8	chr7	15410931	15411322	(143934651)	+	MSTD	LTR/ERVL-MaLR	3	396	(0)	3581235
2223	13.5	5.9	0.3	chr7	16694248	16694612	(142651361)	C	MSTC	LTR/ERVL-MaLR	(0)	428	42	3582865
20	8.6	2.6	2.5	chr7	20470139	20470177	(138875796)	+	(ACAAA)n	Simple_repeat	1	40	(0)	3587824
346	30.8	6.5	1.2	chr7	21729140	21729300	(137616673)	C	MLT1B-int	LTR/ERVL-MaLR	(459)	1030	861	3589650
2203	23.9	1.1	1.3	chr7	21729292	21729910	(137616063)	C	MLT1B-int	LTR/ERVL-MaLR	(635)	736	1	3589650
210	36.0	11.2	1.3	chr7	22822375	22822526	(136523447)	C	MIRc	SINE/MIR	(50)	218	50	3591270
15	16.6	2.3	4.4	chr7	23470377	23470420	(135875553)	+	GA-rich	Low_complexity	1	45	(0)	3592400
25	6.7	3.8	5.5	chr7	23470542	23470594	(135875379)	+	GA-rich	Low_complexity	1	55	(0)	3592401
18	28.9	2.2	3.3	chr7	27130798	27130886	(132215087)	+	(CCCCT)n	Simple_repeat	1	91	(0)	3598046
13	14.0	0.0	5.7	chr7	27130912	27130946	(132215027)	+	(CCGCC)n	Simple_repeat	1	35	(0)	3598047
14	13.4	4.3	6.1	chr7	27169773	27169819	(132176154)	+	G-rich	Low_complexity	1	49	(0)	3598077
14	24.9	2.0	8.7	chr7	27169977	27170077	(132175896)	+	(GCCCCC)n	Simple_repeat	1	103	(0)	3598078
16	27.4	2.1	0.0	chr7	27662892	27662939	(131683034)	+	(GC)n	Simple_repeat	1	49	(0)	3598812
956	14.3	19.7	10.1	chr7	28224805	28225130	(131120843)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	3599704
26	13.4	0.0	0.0	chr7	28225193	28225233	(131120740)	+	(CA)n	Simple_repeat	1	41	(0)	3599705
18	23.3	0.0	0.0	chr7	28685666	28685705	(130660268)	+	(T)n	Simple_repeat	1	40	(0)	3600423
16	22.5	3.7	6.0	chr7	28685950	28686030	(130659943)	+	(GAGAGC)n	Simple_repeat	1	84	(0)	3600424
12	22.7	2.3	2.3	chr7	28686205	28686247	(130659726)	+	(TTTTA)n	Simple_repeat	1	44	(0)	3600425
24	32.4	2.8	0.9	chr7	28686276	28686383	(130659590)	+	(TCC)n	Simple_repeat	1	111	(0)	3600426
12	18.5	0.0	9.6	chr7	30028708	30028759	(129317214)	+	G-rich	Low_complexity	1	52	(0)	3602520
12	12.6	0.0	3.6	chr7	30028809	30028836	(129317137)	+	(GGCCG)n	Simple_repeat	1	28	(0)	3602521
11654	18.2	7.4	2.6	chr7	30491381	30494024	(128851949)	C	L1MD1	LINE/L1	(3749)	2788	15	3603194
777	14.1	5.6	0.7	chr7	31070763	31070898	(128275075)	C	MER5A	DNA/hAT-Charlie	(46)	143	1	3604117
1891	19.5	1.8	5.8	chr7	31557907	31558319	(127787654)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3604862
1103	23.0	13.1	3.1	chr7	31977091	31977445	(127368528)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3605457
11	23.9	6.1	0.0	chr7	33062650	33062698	(126283275)	+	(GCGCTC)n	Simple_repeat	1	52	(0)	3607294
25	19.4	0.0	0.0	chr7	33062804	33062856	(126283117)	+	(CCCGC)n	Simple_repeat	1	53	(0)	3607295
298	26.9	0.8	6.5	chr7	33128853	33128991	(126216982)	+	L1M5	LINE/L1	5623	5753	(490)	3607408
1822	18.6	7.1	1.1	chr7	34683527	34683896	(124662077)	C	MSTD	LTR/ERVL-MaLR	(0)	396	3	3609597
1874	17.7	3.0	0.6	chr7	36136076	36136404	(123209569)	C	MSTC	LTR/ERVL-MaLR	(2)	426	90	3611798
15	0.0	0.0	0.0	chr7	39949858	39949876	(119396097)	+	(GGC)n	Simple_repeat	1	19	(0)	3617484
13	27.2	3.4	5.5	chr7	39949956	39950043	(119395930)	+	(CCCAG)n	Simple_repeat	1	91	(0)	3617485
12	28.6	0.0	0.0	chr7	39950133	39950171	(119395802)	+	GA-rich	Low_complexity	1	39	(0)	3617486
828	31.9	1.0	2.4	chr7	43037382	43037518	(116308455)	+	L2a	LINE/L2	2791	2927	(492)	3622022
2404	11.3	8.9	1.0	chr7	43037519	43037912	(116308061)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	3622024
37	19.7	1.4	8.3	chr7	43582939	43583085	(115762888)	+	G-rich	Low_complexity	1	136	(0)	3622832
31	18.7	4.1	3.9	chr7	44847977	44848074	(114497899)	+	(CGC)n	Simple_repeat	1	102	(0)	3625016
2688	15.0	0.5	1.9	chr7	47432106	47432534	(111913439)	+	MSTC	LTR/ERVL-MaLR	2	424	(4)	3628509
1354	15.2	8.3	6.8	chr7	50774000	50774309	(108571664)	+	L1MB8	LINE/L1	5788	6102	(76)	3632763
1495	16.8	16.9	1.7	chr7	50774337	50774681	(108571292)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	3632764
7270	21.4	5.8	6.6	chr7	50774682	50774869	(108571104)	C	MLT1A1-int	LTR/ERVL-MaLR	(0)	1735	1492	3632764
1943	27.7	11.5	5.2	chr7	50786103	50787268	(108558705)	+	HAL1	LINE/L1	1051	2304	(203)	3632775
29	0.0	0.0	0.0	chr7	50787269	50787295	(108558678)	+	(AGG)n	Simple_repeat	1	27	(0)	3632777
1943	27.7	11.5	5.2	chr7	50787296	50787385	(108558588)	+	HAL1	LINE/L1	2305	2397	(110)	3632775
1944	19.6	0.8	5.5	chr7	55138737	55139152	(104206821)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3638243
474	24.3	4.1	1.6	chr7	55204144	55205010	(104140963)	+	(AC)n	Simple_repeat	1	904	(0)	3638309
43	0.0	0.0	0.0	chr7	55887601	55887639	(103458334)	+	(GCG)n	Simple_repeat	1	39	(0)	3639433
112	8.2	5.8	4.3	chr7	55887695	55887934	(103458039)	+	(GGC)n	Simple_repeat	1	254	(0)	3639434
17	28.2	5.2	0.0	chr7	55964833	55964909	(103381064)	+	G-rich	Low_complexity	1	81	(0)	3639596
19	0.0	0.0	0.0	chr7	56029493	56029513	(103316460)	+	(A)n	Simple_repeat	1	21	(0)	3639759
94	10.7	1.1	1.1	chr7	57495470	57495644	(101850329)	+	(GGAAT)n	Simple_repeat	1	177	(0)	3642547
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
1133	15.8	2.2	8.3	chr7	66593109	66593349	(92752624)	C	MLT1B	LTR/ERVL-MaLR	(163)	227	2	3650351
1713	17.2	8.8	3.5	chr7	67403292	67403580	(91942393)	C	MSTD	LTR/ERVL-MaLR	(0)	396	87	3652142
2261	11.3	1.4	0.0	chr7	67403581	67403871	(91942102)	C	AluSx1	SINE/Alu	(16)	296	2	3652143
1744	14.9	13.0	0.3	chr7	67442270	67442592	(91903381)	+	MSTC	LTR/ERVL-MaLR	1	370	(58)	3652245
1618	11.0	0.9	0.5	chr7	67442626	67442844	(91903129)	+	AluSx1	SINE/Alu	91	310	(2)	3652246
1771	16.4	13.4	0.6	chr7	69398849	69399191	(89946782)	+	MSTD	LTR/ERVL-MaLR	3	396	(0)	3656584
931	30.1	8.0	3.5	chr7	69399254	69399741	(89946232)	+	LTR33A_	LTR/ERVL	18	529	(2)	3656585
2785	21.4	5.4	2.6	chr7	70079560	70079765	(89266208)	+	MER63C	DNA/hAT-Blackjack	149	369	(561)	3657825
1567	19.2	13.4	1.4	chr7	70079766	70080113	(89265860)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3657826
2785	21.4	5.4	2.6	chr7	70080114	70080666	(89265307)	+	MER63C	DNA/hAT-Blackjack	370	930	(0)	3657825
1788	13.1	5.0	0.4	chr7	70621869	70622136	(88723837)	C	AluSx	SINE/Alu	(30)	282	2	3658581
2190	20.6	0.8	0.3	chr7	70994861	70995245	(88350728)	C	MSTD	LTR/ERVL-MaLR	(7)	389	3	3659268
1653	17.4	11.2	7.2	chr7	71004425	71004801	(88341172)	C	MSTD	LTR/ERVL-MaLR	(2)	394	1	3659286
1714	23.2	3.3	0.3	chr7	72276492	72276875	(87069098)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3661986
10929	15.4	7.6	4.3	chr7	72682587	72683287	(86662686)	+	L1MC1	LINE/L1	3	684	(5824)	3662865
2135	12.2	0.0	0.0	chr7	72683288	72683565	(86662408)	+	AluSx1	SINE/Alu	1	278	(34)	3662866
28	0.0	0.0	0.0	chr7	72683569	72683595	(86662378)	+	(CAAAA)n	Simple_repeat	1	27	(0)	3662867
10929	15.4	7.6	4.3	chr7	72683596	72684828	(86661145)	+	L1MC1	LINE/L1	685	2023	(4485)	3662865
20	23.2	1.6	1.6	chr7	73719518	73719579	(85626394)	+	(GGCGGCG)n	Simple_repeat	1	63	(0)	3665292
25	24.9	2.5	5.7	chr7	73719687	73719714	(85626259)	+	(CGGCC)n	Simple_repeat	1	52	(72)	3665293
20	16.4	5.3	1.7	chr7	73719715	73719771	(85626202)	+	G-rich	Low_complexity	1	60	(0)	3665294
21	23.0	4.3	4.1	chr7	75527828	75527920	(83818053)	+	(CCGCCT)n	Simple_repeat	1	97	(0)	3669848
1571	19.9	13.4	0.0	chr7	75759532	75759873	(83586100)	+	MSTD	LTR/ERVL-MaLR	1	395	(1)	3670458
14	8.7	0.0	3.7	chr7	76069405	76069431	(83276542)	+	(AGG)n	Simple_repeat	1	27	(0)	3671251
2384	9.6	0.3	0.0	chr7	76244243	76244543	(83101430)	+	AluSx1	SINE/Alu	1	302	(10)	3671686
961	25.1	10.9	8.0	chr7	78145001	78145516	(81200457)	C	HAL1	LINE/L1	(773)	1734	1202	3675062
1120	16.9	6.8	1.6	chr7	78145531	78145779	(81200194)	+	MSTD	LTR/ERVL-MaLR	98	394	(2)	3675064
913	20.8	4.1	5.4	chr7	78145780	78146000	(81199973)	C	MLT1A	LTR/ERVL-MaLR	(156)	218	1	3675065
304	32.8	11.1	3.7	chr7	80340366	80340557	(79005416)	C	L2	LINE/L2	(597)	2822	2611	3678036
2185	20.0	0.2	0.0	chr7	80340558	80340952	(79005021)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3678037
304	32.8	11.1	3.7	chr7	80340953	80341000	(79004973)	C	L2	LINE/L2	(809)	2610	2562	3678036
1289	23.5	5.1	5.6	chr7	82856782	82857177	(76488796)	+	MSTD	LTR/ERVL-MaLR	1	394	(2)	3681495
2321	9.9	0.0	0.0	chr7	86857919	86858255	(72487718)	C	AluY	SINE/Alu	(0)	311	1	3686474
1104	23.7	10.5	3.9	chr7	86858322	86858685	(72487288)	+	MSTD	LTR/ERVL-MaLR	5	395	(1)	3686475
2414	6.8	0.0	0.7	chr7	86990040	86990335	(72355638)	C	AluY	SINE/Alu	(5)	306	13	3686640
1144	17.9	12.5	4.9	chr7	86990336	86990574	(72355399)	+	MSTC	LTR/ERVL-MaLR	119	405	(3)	3686639
225	28.2	2.7	1.4	chr7	86990623	86990694	(72355279)	C	LTR106_Mam	LTR	(140)	568	496	3686641
48	0.0	0.0	0.0	chr7	87628585	87628625	(71717348)	+	(GT)n	Simple_repeat	1	41	(0)	3687477
14	9.3	0.0	0.0	chr7	87628861	87628883	(71717090)	+	(GCG)n	Simple_repeat	1	23	(0)	3687478
19	28.2	1.6	7.2	chr7	87876335	87876457	(71469516)	+	G-rich	Low_complexity	1	125	(0)	3687771
18	0.0	0.0	0.0	chr7	87934661	87934680	(71411293)	+	(T)n	Simple_repeat	1	20	(0)	3687846
12	14.1	10.3	0.0	chr7	90595595	90595633	(68750340)	+	A-rich	Low_complexity	1	43	(0)	3691354
14	17.0	3.0	0.0	chr7	94395583	94395615	(64950358)	+	(GAT)n	Simple_repeat	1	34	(0)	3696578
49	25.9	4.1	3.1	chr7	94674312	94674324	(64671649)	+	(TATAATA)n	Simple_repeat	1	14	(0)	3696955
1039	26.3	1.3	4.9	chr7	94674325	94674712	(64671261)	+	MLT1A	LTR/ERVL-MaLR	1	374	(0)	3696956
49	25.9	4.1	3.1	chr7	94674713	94674917	(64671056)	+	(TATAATA)n	Simple_repeat	1	206	(0)	3696957
1737	16.5	10.7	0.6	chr7	98566027	98566379	(60779594)	+	MSTD	LTR/ERVL-MaLR	1	393	(3)	3702891
33	9.2	2.7	2.6	chr7	98566423	98566496	(60779477)	+	(TGGA)n	Simple_repeat	1	76	(0)	3702892
2001	10.8	0.0	1.7	chr7	98809446	98809732	(60536241)	+	AluSx1	SINE/Alu	3	284	(28)	3703449
947	17.9	3.1	4.5	chr7	98809733	98810004	(60535969)	+	MSTD	LTR/ERVL-MaLR	99	428	(0)	3703450
2327	7.1	0.3	0.3	chr7	100147854	100148147	(59197826)	+	AluSg	SINE/Alu	1	294	(16)	3705966
1579	15.3	4.5	7.2	chr7	100148165	100148485	(59197488)	C	AluJr	SINE/Alu	(0)	312	1	3705967
11	21.1	8.2	0.0	chr7	101217193	101217241	(58128732)	+	(GCAGGCC)n	Simple_repeat	1	53	(0)	3708256
18	4.2	0.0	0.0	chr7	101217220	101217244	(58128729)	+	(GCA)n	Simple_repeat	1	25	(0)	3708257
190	33.3	0.0	0.0	chr7	101217552	101217611	(58128362)	C	MIR3	SINE/MIR	(49)	159	100	3708258
2420	10.4	0.0	0.0	chr7	101440084	101440392	(57905581)	+	AluSx	SINE/Alu	1	309	(3)	3708824
2117	12.2	0.3	3.4	chr7	101440684	101441004	(57904969)	+	AluSx	SINE/Alu	1	311	(1)	3708825
12	23.8	3.9	1.9	chr7	103989866	103989916	(55356057)	+	(GGACGG)n	Simple_repeat	1	53	(0)	3713460
31	0.0	0.0	0.0	chr7	106101439	106101467	(53244506)	+	(C)n	Simple_repeat	1	29	(0)	3717099
312	27.9	9.8	7.3	chr7	106285214	106285391	(53060582)	C	L1M4b	LINE/L1	(6487)	380	198	3717380
1729	17.7	2.8	8.3	chr7	106644205	106644624	(52701349)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3717875
368	29.9	14.4	8.3	chr7	107580185	107580571	(51765402)	C	L1M4b	LINE/L1	(6263)	604	190	3719278
2094	17.5	1.8	4.4	chr7	108316029	108316435	(51029538)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3720355
2279	9.6	0.0	4.5	chr7	108316494	108316807	(51029166)	+	AluY	SINE/Alu	1	300	(11)	3720356
15	24.9	0.0	5.2	chr7	108456439	108456496	(50889477)	+	(CCCCGC)n	Simple_repeat	1	58	(0)	3720552
447	30.9	3.6	6.0	chr7	108582222	108582421	(50763552)	C	MLT1L	LTR/ERVL-MaLR	(323)	287	93	3720751
1734	18.1	9.3	1.4	chr7	108582442	108582805	(50763168)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3720752
1785	12.9	10.1	9.5	chr7	111204936	111205336	(48140637)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	5	3724014
201	29.5	5.4	7.9	chr7	111341625	111341717	(48004256)	+	L3	LINE/CR1	3794	3891	(208)	3724185
1418	20.6	11.9	2.0	chr7	111341718	111342073	(48003900)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3724186
201	29.5	5.4	7.9	chr7	111342074	111342093	(48003880)	+	L3	LINE/CR1	3892	3904	(195)	3724185
1640	20.5	6.5	7.5	chr7	111601475	111601640	(47744333)	C	MER67A	LTR/ERV1	(38)	505	314	3724564
1329	22.4	10.9	0.6	chr7	111601641	111601995	(47743978)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3724566
1640	20.5	6.5	7.5	chr7	111601996	111602238	(47743735)	C	MER67A	LTR/ERV1	(230)	313	82	3724564
949	19.9	12.0	9.8	chr7	112367515	112367864	(46978109)	C	MSTC	LTR/ERVL-MaLR	(8)	420	1	3725685
992	34.9	12.0	4.3	chr7	113407578	113408692	(45937281)	+	L2a	LINE/L2	2158	3384	(42)	3727090
2593	14.2	2.6	0.0	chr7	114860948	114861364	(44484609)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	3728945
213	32.3	7.7	2.5	chr7	116499175	116499371	(42846602)	C	MIRb	SINE/MIR	(31)	237	30	3731129
19	13.2	1.8	6.9	chr7	116526466	116526522	(42819451)	+	(TCCGCCC)n	Simple_repeat	1	58	(0)	3731165
410	29.1	5.8	10.1	chr7	116730967	116731184	(42614789)	C	MIR	SINE/MIR	(34)	228	21	3731479
1683	18.1	9.2	0.6	chr7	116955250	116955588	(42390385)	C	MSTD	LTR/ERVL-MaLR	(1)	395	25	3731853
302	23.7	8.7	12.0	chr7	121395853	121396068	(37949905)	+	L1M4b	LINE/L1	472	679	(6188)	3737604
16	30.9	1.4	1.4	chr7	121396138	121396206	(37949767)	+	(CCGC)n	Simple_repeat	1	70	(0)	3737605
1396	21.1	4.0	11.4	chr7	123392742	123393170	(35952803)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3740358
1579	23.7	2.0	3.9	chr7	123643366	123643830	(35702143)	+	L1MB8	LINE/L1	5709	6164	(14)	3740739
12	25.9	0.0	2.3	chr7	123748458	123748500	(35597473)	+	G-rich	Low_complexity	1	43	(0)	3740905
2348	15.5	6.1	0.0	chr7	125484204	125484602	(33861371)	C	MSTC	LTR/ERVL-MaLR	(3)	425	1	3743177
1142	20.7	14.6	11.1	chr7	126508178	126508557	(32837416)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3744531
14	16.6	2.3	4.4	chr7	128830388	128830431	(30515542)	+	(CCCGG)n	Simple_repeat	1	45	(0)	3748032
12	21.0	5.1	0.0	chr7	128830473	128830511	(30515462)	+	(GCCGC)n	Simple_repeat	1	41	(0)	3748033
16	21.1	4.1	0.0	chr7	128830589	128830637	(30515336)	+	(AGCCCC)n	Simple_repeat	1	51	(0)	3748034
31	29.5	2.4	1.5	chr7	129224897	129225023	(30120950)	+	G-rich	Low_complexity	1	130	(0)	3748759
19	32.7	0.0	1.2	chr7	129225229	129225309	(30120664)	+	(GGCCCC)n	Simple_repeat	1	81	(0)	3748760
1179	24.1	7.4	6.6	chr7	130326321	130326746	(29019227)	+	LTR16A1	LTR/ERVL	27	456	(0)	3750968
240	22.6	6.1	0.0	chr7	130440616	130440677	(28905296)	+	L2c	LINE/L2	3253	3318	(69)	3751166
18	23.7	0.0	6.8	chr7	130440761	130440833	(28905140)	+	(GCCCC)n	Simple_repeat	1	73	(0)	3751167
2843	11.1	2.8	1.9	chr7	131075706	131076129	(28269844)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	3752087
1739	21.7	2.3	3.5	chr7	135864401	135864617	(23481356)	C	MSTD	LTR/ERVL-MaLR	(0)	396	187	3759717
2162	10.6	0.0	0.3	chr7	135864618	135864900	(23481073)	C	AluSq2	SINE/Alu	(8)	305	24	3759718
11259	10.2	1.8	0.1	chr7	137831667	137833220	(21512753)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3762462
7318	17.3	13.5	12.7	chr7	138308845	138309236	(21036737)	C	MER21-int	LTR/ERVL	(649)	3542	2987	3763339
1020	18.4	0.0	2.2	chr7	138309237	138309414	(21036559)	C	MSTC	LTR/ERVL-MaLR	(51)	377	204	3763344
1708	18.4	5.3	0.3	chr7	138309415	138309702	(21036271)	C	AluJb	SINE/Alu	(7)	305	3	3763345
756	14.1	2.2	4.2	chr7	138406408	138406549	(20939424)	C	AluJb	SINE/Alu	(0)	312	174	3763553
1561	19.8	4.4	0.7	chr7	138406551	138406859	(20939114)	+	MSTD	LTR/ERVL-MaLR	74	391	(5)	3763552
1945	24.0	3.5	2.2	chr7	138406891	138407397	(20938576)	C	LTR40a	LTR/ERVL	(5)	514	1	3763554
12	19.6	7.0	5.3	chr7	138460756	138460826	(20885147)	+	(CTGC)n	Simple_repeat	1	76	(0)	3763676
15	4.3	4.2	0.0	chr7	138461132	138461155	(20884818)	+	(CCG)n	Simple_repeat	1	25	(0)	3763677
2095	15.1	11.1	0.0	chr7	139327361	139327712	(20018261)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3765347
2343	8.8	0.3	0.0	chr7	139339886	139340182	(20005791)	C	AluSp	SINE/Alu	(15)	298	1	3765382
15	17.8	2.6	0.0	chr7	139360345	139360382	(19985591)	+	G-rich	Low_complexity	1	39	(0)	3765423
838	24.6	3.9	0.8	chr7	139778909	139779158	(19566815)	+	MER112	DNA/hAT-Charlie	1	258	(3)	3766166
850	14.1	0.0	0.0	chr7	139854988	139855115	(19490858)	+	MSTC	LTR/ERVL-MaLR	1	128	(300)	3766309
1180	12.9	0.0	0.0	chr7	139855111	139855273	(19490700)	+	MSTC	LTR/ERVL-MaLR	266	428	(0)	3766309
2460	11.5	10.8	0.5	chr7	140047201	140047584	(19298389)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	3766629
23	15.1	0.0	2.2	chr7	140479183	140479228	(18866745)	+	(GCC)n	Simple_repeat	1	46	(0)	3767540
13	21.8	0.0	0.0	chr7	140479268	140479300	(18866673)	+	(GCTGCC)n	Simple_repeat	1	33	(0)	3767541
19	24.8	2.1	6.1	chr7	140924604	140924699	(18421274)	+	(CGGCGC)n	Simple_repeat	1	98	(0)	3768435
32	2.3	4.3	2.1	chr7	140924758	140924803	(18421170)	+	(GGAGGC)n	Simple_repeat	1	48	(0)	3768436
256	23.1	10.0	0.0	chr7	141551677	141551784	(17794189)	+	MIR3	SINE/MIR	27	146	(62)	3769473
944	21.1	15.3	4.5	chr7	142012206	142012518	(17333455)	C	MLT1A0	LTR/ERVL-MaLR	(12)	353	1	3770099
1791	23.5	1.0	5.8	chr7	143024098	143024508	(16321465)	+	MSTD	LTR/ERVL-MaLR	1	391	(5)	3771294
2076	18.5	2.0	1.0	chr7	145109506	145109892	(14236081)	+	MSTD	LTR/ERVL-MaLR	1	391	(5)	3774185
703	19.7	9.2	1.1	chr7	145109898	145110077	(14235896)	+	MSTD-int	LTR/ERVL-MaLR	14	209	(1526)	3774185
570	28.1	2.5	1.0	chr7	145158575	145158775	(14187198)	C	Tigger15a	DNA/TcMar-Tigger	(1)	714	511	3774257
946	22.5	17.1	5.1	chr7	147451738	147452093	(11893880)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	3777272
1508	19.6	15.9	0.6	chr7	148034293	148034626	(11311347)	+	MSTD	LTR/ERVL-MaLR	2	396	(0)	3778108
6546	23.0	7.6	3.1	chr7	148034629	148036283	(11309690)	+	MSTD-int	LTR/ERVL-MaLR	2	1735	(0)	3778108
6976	19.5	12.2	2.5	chr7	148456337	148457915	(10888058)	C	MER52A	LTR/ERV1	(2)	1753	1	3778795
303	32.9	0.5	0.0	chr7	149692449	149692597	(9653376)	+	L1MEg	LINE/L1	1483	1638	(869)	3781041
33	0.0	2.6	2.5	chr7	150347952	150347990	(8997983)	+	(AAAT)n	Simple_repeat	1	40	(0)	3781914
1089	22.5	14.8	2.5	chr7	150347991	150348202	(8997771)	+	MLT1A1	LTR/ERVL-MaLR	148	407	(1)	3781911
21	14.1	0.0	0.0	chr7	151059515	151059553	(8286420)	+	(CGCCCC)n	Simple_repeat	1	39	(0)	3782839
1599	22.7	4.5	3.0	chr7	151328801	151329202	(8016771)	+	MSTD	LTR/ERVL-MaLR	1	373	(23)	3783257
2468	16.5	8.8	10.2	chr7	151442732	151442858	(7903115)	C	L1MC1	LINE/L1	(317)	6016	5899	3783438
1859	16.7	12.1	0.3	chr7	151442859	151443207	(7902766)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3783442
2468	16.5	8.8	10.2	chr7	151443208	151443530	(7902443)	C	L1MC1	LINE/L1	(435)	5898	5593	3783438
2192	12.6	0.0	0.7	chr7	151549466	151549774	(7796199)	+	AluSx1	SINE/Alu	6	312	(0)	3783645
1424	18.8	13.9	1.4	chr7	151549775	151549969	(7796004)	+	MSTD	LTR/ERVL-MaLR	198	395	(1)	3783644
1676	24.4	5.1	1.6	chr7	151549970	151550153	(7795820)	C	MLT1C	LTR/ERVL-MaLR	(270)	197	1	3783643
16	13.1	3.4	8.2	chr7	151632244	151632302	(7713671)	+	G-rich	Low_complexity	1	61	(0)	3783800
18	23.4	1.4	5.5	chr7	151632301	151632372	(7713601)	+	(CGC)n	Simple_repeat	1	73	(0)	3783801
45	2.4	0.0	0.0	chr7	151726372	151726414	(7619559)	+	(AC)n	Simple_repeat	1	43	(0)	3783948
420	31.0	13.3	2.1	chr7	151726427	151726706	(7619267)	+	L1ME3A	LINE/L1	5584	5899	(274)	3783949
379	20.7	12.1	0.0	chr7	151726782	151726868	(7619105)	+	L1ME3A	LINE/L1	6061	6159	(14)	3783949
1234	23.3	5.9	6.5	chr7	151968705	151969392	(7376581)	C	L1M3	LINE/L1	(595)	5584	4932	3784340
2426	20.3	3.9	7.0	chr7	151969393	151969798	(7376175)	C	LTR71B	LTR/ERV1	(0)	610	199	3784341
1762	15.0	0.7	1.7	chr7	152025174	152025473	(7320500)	C	7SLRNA	srpRNA	(5)	315	19	3784461
16	22.0	5.4	3.9	chr7	152025618	152025691	(7320282)	+	(CGCGG)n	Simple_repeat	1	78	(0)	3784462
23	12.4	3.5	5.0	chr7	152025935	152025992	(7319981)	+	(GCG)n	Simple_repeat	1	60	(0)	3784463
18	18.1	6.9	1.6	chr7	152162726	152162740	(7183233)	+	(TTC)n	Simple_repeat	1	58	(0)	3784631
16	12.5	0.0	5.1	chr7	152162741	152162779	(7183194)	+	(TCTTTTT)n	Simple_repeat	1	39	(0)	3784632
15	22.0	1.7	5.1	chr7	152379736	152379793	(6966180)	+	A-rich	Low_complexity	1	59	(0)	3784981
1645	17.3	0.0	7.9	chr7	152379814	152379950	(6966023)	+	AluJo	SINE/Alu	1	127	(185)	3784982
2116	12.6	0.6	2.8	chr7	152379951	152380268	(6965705)	+	AluSx	SINE/Alu	1	311	(1)	3784983
29	0.0	0.0	0.0	chr7	152436749	152436775	(6909198)	+	(CTCCGG)n	Simple_repeat	1	27	(0)	3785122
94	3.9	2.0	4.0	chr7	155158275	155158420	(4187553)	+	(AGAA)n	Simple_repeat	1	149	(0)	3789276
837	19.9	15.8	7.5	chr7	155158421	155158713	(4187260)	C	MLT1A	LTR/ERVL-MaLR	(52)	322	1	3789274
1722	17.6	5.5	2.4	chr7	155158714	155159068	(4186905)	C	MLT1B	LTR/ERVL-MaLR	(16)	374	14	3789277
1254	19.9	10.1	5.3	chr7	156372366	156372741	(2973232)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3790820
304	28.1	4.2	3.4	chr7	156372760	156372846	(2973127)	C	HAL1ME	LINE/L1	(130)	2335	2247	3790821
1090	18.1	20.1	1.2	chr7	156612439	156612768	(2733205)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	3791127
16	27.8	1.8	0.0	chr7	156640631	156640686	(2705287)	+	G-rich	Low_complexity	1	57	(0)	3791165
2215	14.8	7.8	0.0	chr7	156850037	156850401	(2495572)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3791438
333	28.5	4.3	4.3	chr7	157076704	157076890	(2269083)	+	MLT1J	LTR/ERVL-MaLR	302	488	(24)	3791815
1522	18.0	1.0	5.7	chr7	157349481	157349651	(1996322)	C	AluJo	SINE/Alu	(10)	302	146	3792364
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
218	31.5	17.4	1.4	chr7	159010345	159010566	(335407)	+	L2a	LINE/L2	2591	2855	(564)	3794004
258	30.9	9.6	0.0	chr7	159010770	159010863	(335110)	+	L2a	LINE/L2	3321	3424	(2)	3794004
5249	18.3	11.3	2.1	chr8	205741	207331	(144931305)	C	TAR1	Satellite/telo	(43)	2068	314	3794562
1627	20.9	7.2	2.7	chr8	7050663	7051070	(138087566)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	3802925
13	22.6	0.0	4.4	chr8	8869196	8869240	(136269396)	+	A-rich	Low_complexity	1	45	(0)	3805478
1085	19.0	17.9	3.6	chr8	9640140	9640440	(135498196)	C	MLT1A0	LTR/ERVL-MaLR	(12)	353	1	3806854
293	32.7	9.0	0.6	chr8	11429511	11429673	(133708963)	C	MIRb	SINE/MIR	(55)	213	36	3809576
31	24.5	1.9	7.4	chr8	13133415	13133574	(132005062)	+	(CCCGC)n	Simple_repeat	1	163	(0)	3812190
12	25.3	5.8	0.0	chr8	15236892	15236943	(129901693)	+	(CCCGCGT)n	Simple_repeat	1	55	(0)	3815071
6210	24.7	7.9	2.2	chr8	15656151	15657785	(129480851)	C	MLT1A1-int	LTR/ERVL-MaLR	(0)	1735	2	3815709
1088	18.5	16.7	3.7	chr8	15657786	15658138	(129480498)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	3815709
644	23.9	11.0	2.5	chr8	17773454	17773771	(127364865)	C	MSTD	LTR/ERVL-MaLR	(12)	416	1	3818695
3104	25.9	13.4	2.6	chr8	18996604	18998107	(126140529)	+	L2a	LINE/L2	1729	3426	(0)	3820478
1150	22.8	10.7	4.7	chr8	19043561	19043900	(126094736)	+	MLT1A0	LTR/ERVL-MaLR	3	365	(0)	3820551
1853	18.5	7.3	1.1	chr8	19140183	19140553	(125998083)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3820721
272	28.2	0.5	21.7	chr8	19140556	19140795	(125997841)	+	L2a	LINE/L2	3234	3422	(4)	3820722
1543	21.6	5.3	9.9	chr8	19863157	19863572	(125275064)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3821899
1634	22.6	6.3	1.6	chr8	20427130	20427506	(124711130)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3822841
1697	20.9	0.3	0.3	chr8	21633861	21634162	(123504474)	+	AluJr	SINE/Alu	1	302	(10)	3824757
2061	17.5	1.8	7.6	chr8	21634163	21634379	(123504257)	+	MSTD	LTR/ERVL-MaLR	193	396	(0)	3824756
3986	24.2	3.2	3.2	chr8	21634382	21635389	(123503247)	+	MSTD-int	LTR/ERVL-MaLR	2	1009	(726)	3824756
1779	19.7	7.8	1.9	chr8	21807115	21807486	(123331150)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3825050
1072	12.6	7.5	11.6	chr8	21807487	21807714	(123330922)	C	MLT1B	LTR/ERVL-MaLR	(21)	369	151	3825049
29	31.5	1.6	5.8	chr8	22165128	22165313	(122973323)	+	G-rich	Low_complexity	1	189	(0)	3825674
2463	24.3	13.6	4.4	chr8	26129829	26130628	(119008008)	+	MLT-int	LTR/ERVL-MaLR	765	1649	(86)	3832137
1775	22.3	0.8	1.1	chr8	26130632	26130998	(119007638)	+	MSTD	LTR/ERVL-MaLR	29	394	(2)	3832138
1789	16.2	11.1	1.7	chr8	28397206	28397563	(116741073)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3836050
2199	11.7	0.3	1.0	chr8	28397648	28397947	(116740689)	C	AluSz	SINE/Alu	(14)	298	1	3836051
13	15.8	2.7	2.6	chr8	29262702	29262738	(115875898)	+	(GGCGCA)n	Simple_repeat	1	38	(0)	3837622
24	19.2	0.0	0.0	chr8	29263113	29263165	(115875471)	+	G-rich	Low_complexity	1	53	(0)	3837623
3151	27.9	5.8	6.4	chr8	30075762	30076570	(115062066)	+	HAL1	LINE/L1	43	869	(1638)	3838985
2185	14.7	7.3	0.8	chr8	30076571	30076940	(115061696)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3838986
3151	27.9	5.8	6.4	chr8	30076941	30077174	(115061462)	+	HAL1	LINE/L1	870	1108	(1399)	3838985
2294	15.4	5.3	2.5	chr8	30952280	30952684	(114185952)	C	MSTC	LTR/ERVL-MaLR	(4)	424	8	3840757
1724	18.0	11.6	0.8	chr8	33428598	33428950	(111709686)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3844447
2371	11.2	0.3	0.0	chr8	33631145	33631448	(111507188)	+	AluSx	SINE/Alu	1	305	(7)	3844952
788	15.0	4.8	10.3	chr8	33631449	33631492	(111507144)	C	MSTD	LTR/ERVL-MaLR	(104)	292	250	3844951
9953	10.4	4.9	2.1	chr8	33631497	33632995	(111505641)	+	LTR12C	LTR/ERV1	3	1549	(30)	3844953
290	26.7	2.5	5.7	chr8	37053865	37053987	(108084649)	C	MER94	DNA/hAT-Blackjack	(0)	134	16	3849760
1372	19.8	13.1	2.3	chr8	37053999	37054350	(108084286)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3849761
20	0.0	0.0	3.9	chr8	37313427	37313452	(107825184)	+	(CA)n	Simple_repeat	1	26	(0)	3850129
1620	20.4	8.6	3.7	chr8	37313500	37313875	(107824761)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3850130
1696	16.4	9.6	6.1	chr8	37482944	37483334	(107655302)	+	MLT1A1	LTR/ERVL-MaLR	3	408	(0)	3850384
376	33.0	3.4	1.3	chr8	38626749	38626981	(106511655)	+	CR1-3_Croc	LINE/CR1	2740	2977	(628)	3852662
935	24.0	0.5	0.0	chr8	40248521	40248716	(104889920)	C	MSTD	LTR/ERVL-MaLR	(0)	396	200	3855070
2155	3.5	0.0	0.0	chr8	40248756	40249013	(104889623)	C	L1PA4	LINE/L1	(3)	6152	5895	3855071
1032	14.0	11.9	0.6	chr8	41394864	41395041	(103743595)	+	AluSx1	SINE/Alu	1	201	(111)	3856909
460	26.9	4.1	9.0	chr8	41395042	41395088	(103743548)	+	MER63D	DNA/hAT-Blackjack	230	276	(785)	3856910
2200	16.2	2.5	0.8	chr8	41395089	41395473	(103743163)	C	MSTD	LTR/ERVL-MaLR	(4)	392	1	3856911
460	26.9	4.1	9.0	chr8	41395474	41395580	(103743056)	+	MER63D	DNA/hAT-Blackjack	277	376	(685)	3856910
289	34.5	3.6	2.0	chr8	41644844	41645015	(103493621)	+	L2c	LINE/L2	3172	3390	(36)	3857379
215	23.6	0.0	12.2	chr8	42053674	42053755	(103084881)	+	L2a	LINE/L2	3354	3425	(1)	3858037
712	13.9	11.6	0.0	chr8	42053778	42053899	(103084737)	+	AluJo	SINE/Alu	136	273	(39)	3858038
22	12.7	9.6	2.5	chr8	42541714	42541786	(102596850)	+	(CCCCGCGT)n	Simple_repeat	1	80	(0)	3858983
15	19.9	0.0	0.0	chr8	42541757	42541791	(102596845)	+	(CCCGG)n	Simple_repeat	1	35	(0)	3858984
2059	20.7	2.3	0.5	chr8	42779833	42780221	(102358415)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3859477
16	18.2	3.2	6.2	chr8	42896842	42896904	(102241732)	+	G-rich	Low_complexity	1	65	(0)	3859715
1386	17.6	11.0	0.4	chr8	46618018	46618284	(98520352)	+	AluJo	SINE/Alu	2	300	(12)	3860951
358	11.0	2.7	0.0	chr8	47585420	47585492	(97553144)	C	L1MD1	LINE/L1	(1)	6749	6675	3862112
2606	10.6	5.4	3.8	chr8	47585552	47585972	(97552664)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	3862113
1273	23.1	20.0	1.4	chr8	47855472	47856030	(97282606)	+	MER76	LTR/ERVL	3	691	(0)	3862491
846	14.5	9.3	1.2	chr8	48748212	48748378	(96390258)	+	MLT2B3	LTR/ERVL	1	182	(372)	3863646
1267	19.1	13.4	4.5	chr8	48748382	48748733	(96389903)	+	MSTD	LTR/ERVL-MaLR	9	396	(0)	3863647
5133	26.0	10.8	2.5	chr8	48748736	48749353	(96389283)	+	MSTD-int	LTR/ERVL-MaLR	2	636	(1099)	3863647
1469	22.3	10.6	0.0	chr8	51588910	51589263	(93549373)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3866981
5997	24.6	6.1	2.8	chr8	51589267	51590940	(93547696)	+	MSTD-int	LTR/ERVL-MaLR	3	1735	(0)	3866981
15	9.8	6.1	0.0	chr8	51898578	51898610	(93240026)	+	(CGAGGA)n	Simple_repeat	1	35	(0)	3867393
1669	17.3	6.1	4.9	chr8	55671472	55671860	(89466776)	+	MSTD	LTR/ERVL-MaLR	1	394	(2)	3872687
2339	5.2	0.0	2.1	chr8	55847662	55847976	(89290660)	C	AluY	SINE/Alu	(0)	311	1	3873033
2092	14.3	0.0	0.0	chr8	55947981	55948273	(89190363)	C	AluJr	SINE/Alu	(19)	293	1	3873253
530	23.3	4.2	1.3	chr8	55948728	55948884	(89189752)	+	MIRb	SINE/MIR	46	202	(60)	3873254
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
828	29.3	5.5	3.9	chr8	57210498	57210965	(87927671)	C	MER50	LTR/ERV1	(231)	503	28	3874994
40	0.0	0.0	0.0	chr8	58553556	58553592	(86585044)	+	(GGGCTG)n	Simple_repeat	1	37	(0)	3876759
1814	23.7	1.5	0.5	chr8	60171158	60171547	(84967089)	+	MSTD	LTR/ERVL-MaLR	3	396	(0)	3878756
1331	17.8	14.3	0.4	chr8	60171558	60171804	(84966832)	C	AluJr	SINE/Alu	(25)	287	1	3878757
322	38.2	5.1	5.4	chr8	60253726	60254057	(84884579)	+	L2b	LINE/L2	3036	3366	(9)	3878872
3074	19.1	4.8	2.3	chr8	60893968	60894653	(84243983)	+	L1MC4a	LINE/L1	7177	7880	(2)	3879845
802	13.1	0.8	0.0	chr8	60894669	60894790	(84243846)	+	MSTC	LTR/ERVL-MaLR	229	351	(77)	3879846
248	29.9	23.6	1.2	chr8	60959350	60959758	(84178878)	+	L2	LINE/L2	2326	2854	(565)	3879963
1633	14.7	19.4	0.0	chr8	60959760	60960078	(84178558)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3879964
21	15.8	0.0	0.0	chr8	60960172	60960207	(84178429)	+	(CA)n	Simple_repeat	1	36	(0)	3879965
1663	21.1	5.3	3.1	chr8	61428960	61429140	(83709496)	C	MSTD	LTR/ERVL-MaLR	(0)	396	215	3880632
2389	10.6	0.0	0.0	chr8	61429141	61429443	(83709193)	+	AluSg	SINE/Alu	2	304	(6)	3880633
1537	21.2	9.3	1.6	chr8	61943913	61944277	(83194359)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3881318
1362	22.3	1.2	1.9	chr8	66238885	66239208	(78899428)	C	MSTD-int	LTR/ERVL-MaLR	(1412)	323	2	3887036
2068	14.8	9.8	0.6	chr8	66239211	66239569	(78899067)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3887036
506	23.7	2.2	1.5	chr8	66239646	66239782	(78898854)	+	MER5A1	DNA/hAT-Charlie	25	162	(4)	3887043
1324	18.2	0.0	1.8	chr8	69914701	69914925	(75223711)	+	AluJb	SINE/Alu	87	307	(5)	3892807
1787	17.6	9.2	0.0	chr8	69914961	69915306	(75223330)	C	MSTD	LTR/ERVL-MaLR	(0)	396	16	3892808
2019	27.4	6.4	2.7	chr8	70614745	70615603	(74523033)	C	L2	LINE/L2	(2334)	1085	193	3894124
28	0.0	0.0	0.0	chr8	73009049	73009074	(72129562)	+	(GAG)n	Simple_repeat	1	26	(0)	3897250
1645	21.1	6.8	2.1	chr8	73994944	73995320	(71143316)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3898961
2153	13.7	3.5	6.5	chr8	73995321	73995551	(71143085)	C	MLT1B	LTR/ERVL-MaLR	(151)	239	19	3898960
769	24.7	11.4	9.4	chr8	74053708	74054025	(71084611)	+	MSTD	LTR/ERVL-MaLR	1	330	(66)	3899083
1614	22.2	0.3	0.3	chr8	74054026	74054327	(71084309)	C	AluJb	SINE/Alu	(10)	302	1	3899084
460	27.0	13.6	4.0	chr8	75136481	75136907	(70001729)	+	MLT1H2	LTR/ERVL-MaLR	2	549	(0)	3900582
5499	25.5	8.4	3.4	chr8	75210305	75211827	(69926809)	C	MSTD-int	LTR/ERVL-MaLR	(114)	1621	11	3900660
855	23.5	20.9	2.5	chr8	75211840	75212158	(69926478)	C	MSTD	LTR/ERVL-MaLR	(3)	393	1	3900660
628	33.2	1.7	2.4	chr8	78685575	78685809	(66452827)	+	L1MC5	LINE/L1	6655	6888	(2416)	3904993
1671	21.6	4.0	0.5	chr8	78685810	78686191	(66452445)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3904995
628	33.2	1.7	2.4	chr8	78686192	78686251	(66452385)	+	L1MC5	LINE/L1	6889	6948	(2356)	3904993
1104	22.0	17.4	1.8	chr8	79429132	79429464	(65709172)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3905979
404	31.5	11.0	7.9	chr8	79622710	79623229	(65515407)	C	LTR103b_Mam	LTR/ERV1?	(9)	539	2	3906229
1497	20.9	13.7	0.3	chr8	79701760	79702100	(65436536)	C	MSTD	LTR/ERVL-MaLR	(2)	394	1	3906363
1835	18.0	0.5	10.1	chr8	80905151	80905558	(64233078)	+	MSTD	LTR/ERVL-MaLR	28	396	(0)	3908551
983	28.1	8.1	4.2	chr8	82281288	82281799	(62856837)	+	L1MEg	LINE/L1	1432	1980	(4262)	3910448
1793	19.3	6.6	1.9	chr8	82281800	82282174	(62856462)	C	MSTD	LTR/ERVL-MaLR	(2)	394	1	3910449
1854	19.0	5.7	0.2	chr8	85171670	85172071	(59966565)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	8	3914147
19176	10.0	0.2	0.5	chr8	85737907	85741568	(59397068)	+	L1PA5	LINE/L1	2507	6152	(2)	3914958
874	30.3	7.6	8.7	chr8	86330701	86331379	(58807257)	+	LTR85a	LTR/Gypsy?	5	675	(27)	3915892
243	24.5	0.0	1.1	chr8	86331390	86331484	(58807152)	+	L1MEf	LINE/L1	1274	1367	(4875)	3915893
1159	21.6	5.9	1.6	chr8	86331490	86331790	(58806846)	C	MSTD	LTR/ERVL-MaLR	(0)	396	50	3915894
820	17.4	1.4	2.7	chr8	86331793	86331965	(58806671)	C	AluJb	SINE/Alu	(0)	312	165	3915895
17	21.4	3.9	5.0	chr8	92103352	92103428	(53035208)	+	(GCGCCGC)n	Simple_repeat	1	80	(0)	3923414
12	9.8	0.0	0.0	chr8	92103580	92103601	(53035035)	+	(GGGC)n	Simple_repeat	1	22	(0)	3923415
2035	19.1	3.3	1.3	chr8	93683125	93683512	(51455124)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3925612
596	27.7	4.8	2.8	chr8	93683612	93683793	(51454843)	+	MLT1J	LTR/ERVL-MaLR	31	216	(296)	3925613
202	37.2	3.0	3.7	chr8	93699925	93700058	(51438578)	+	L2b	LINE/L2	3242	3374	(1)	3925655
20	10.5	2.2	4.3	chr8	93917509	93917553	(51221083)	+	G-rich	Low_complexity	1	46	(0)	3926056
14	17.8	5.3	0.0	chr8	93917771	93917808	(51220828)	+	(CGC)n	Simple_repeat	1	40	(0)	3926057
388	26.7	4.3	7.5	chr8	97206687	97206708	(47931928)	+	MamRep488	DNA/hAT-Tip100	68	85	(134)	3931381
2066	16.4	3.8	3.1	chr8	97206709	97207097	(47931539)	C	MSTD	LTR/ERVL-MaLR	(4)	392	1	3931382
2209	15.8	5.9	0.5	chr8	98285926	98286293	(46852343)	+	MSTD	LTR/ERVL-MaLR	5	393	(3)	3933447
1845	18.6	3.8	5.5	chr8	100822241	100822643	(44315993)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3937584
694	27.4	9.3	9.5	chr8	101250619	101251069	(43887567)	C	LTR33	LTR/ERVL	(21)	494	45	3938415
2420	8.8	0.0	0.0	chr8	102433562	102433868	(42704768)	+	AluY	SINE/Alu	1	307	(4)	3940329
2415	18.1	6.5	3.3	chr8	102433869	102434025	(42704611)	+	LTR26C	LTR/ERV1	375	539	(0)	3940326
12	16.8	8.8	3.2	chr8	103299019	103299075	(41839561)	+	G-rich	Low_complexity	1	62	(0)	3942080
1652	17.6	7.1	4.9	chr8	104385594	104385963	(40752673)	+	MSTD	LTR/ERVL-MaLR	1	379	(17)	3943614
276	31.8	11.2	1.4	chr8	105498649	105498869	(39639767)	C	L2c	LINE/L2	(294)	3093	2851	3945245
1854	18.8	4.3	1.6	chr8	106459117	106459499	(38679137)	+	MSTD	LTR/ERVL-MaLR	3	396	(0)	3946561
1702	18.5	1.0	0.3	chr8	109625429	109625720	(35512916)	C	AluJr	SINE/Alu	(18)	294	1	3951109
388	34.0	11.2	6.0	chr8	111094438	111094557	(34044079)	C	L2	LINE/L2	(717)	2702	2585	3953065
1207	22.1	17.9	0.0	chr8	111094558	111094892	(34043744)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	1	3953066
1015	25.0	6.9	3.7	chr8	115306179	115306473	(29832163)	+	MSTD	LTR/ERVL-MaLR	1	305	(91)	3958515
400	34.6	7.0	2.1	chr8	115306509	115306785	(29831851)	C	L2a	LINE/L2	(1)	3425	3089	3958516
917	25.8	15.5	1.2	chr8	116179918	116180254	(28958382)	+	MSTD	LTR/ERVL-MaLR	1	394	(2)	3959655
2237	25.8	12.2	6.7	chr8	116435438	116437012	(28701624)	+	L1MEc	LINE/L1	39	1713	(4687)	3960009
10735	9.0	4.7	0.8	chr8	116720531	116722048	(28416588)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3960474
1216	21.3	6.0	4.7	chr8	119438206	119438565	(25700071)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	3964821
1902	16.1	0.7	0.0	chr8	122996901	122997192	(22141444)	C	AluJb	SINE/Alu	(13)	299	6	3970954
317	30.9	7.3	2.1	chr8	122997198	122997339	(22141297)	C	LTR33B	LTR/ERVL	(353)	150	1	3970955
417	30.9	11.1	3.3	chr8	122997406	122997646	(22140990)	+	MLT1N2	LTR/ERVL-MaLR	6	267	(295)	3970956
217	23.6	15.4	3.5	chr8	124040426	124040539	(21098097)	+	MIR	SINE/MIR	63	192	(70)	3972984
2517	14.2	6.1	1.9	chr8	124040546	124040955	(21097681)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	3972985
1455	22.0	3.1	6.2	chr8	124071661	124072029	(21066607)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	34	3973045
1075	22.1	6.3	0.0	chr8	124850680	124850887	(20287749)	C	MSTD	LTR/ERVL-MaLR	(50)	346	125	3974486
205	28.4	13.6	1.6	chr8	124850889	124851017	(20287619)	C	MIRb	SINE/MIR	(118)	150	4	3974484
394	28.6	11.4	7.1	chr8	124851658	124851812	(20286824)	+	MIR	SINE/MIR	24	173	(89)	3974489
1593	20.5	11.4	0.0	chr8	124851813	124852163	(20286473)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3974490
1203	18.3	17.1	6.1	chr8	125382310	125382687	(19755949)	C	MSTC	LTR/ERVL-MaLR	(0)	428	1	3975460
17	11.6	0.0	0.0	chr8	125721016	125721044	(19417592)	+	(CTAT)n	Simple_repeat	1	29	(0)	3976255
1205	20.2	12.4	5.7	chr8	125721045	125721375	(19417261)	C	MLT1A0	LTR/ERVL-MaLR	(8)	357	2	3976256
2921	11.1	1.4	1.4	chr8	129986391	129986818	(15151818)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	3984108
263	26.0	7.1	13.8	chr8	132700717	132700875	(12437761)	C	MLT1K	LTR/ERVL-MaLR	(413)	182	34	3989069
1154	22.7	15.4	2.0	chr8	132700876	132701217	(12437419)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	3989070
1983	19.0	3.0	2.0	chr8	132707376	132707767	(12430869)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3989086
1246	16.9	10.0	2.7	chr8	132976158	132976482	(12162154)	C	MSTD	LTR/ERVL-MaLR	(0)	396	3	3989537
2595	19.2	5.2	2.8	chr8	134701681	134701843	(10436793)	C	L1ME1	LINE/L1	(288)	5891	5725	3992705
2594	11.1	5.4	2.6	chr8	134701844	134702259	(10436377)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	3992706
2595	19.2	5.2	2.8	chr8	134702260	134702362	(10436274)	C	L1ME1	LINE/L1	(455)	5724	5614	3992705
14	18.0	8.6	1.6	chr8	134832022	134832079	(10306557)	+	(CGCCCCAG)n	Simple_repeat	1	63	(0)	3992945
1681	19.8	7.1	1.1	chr8	135927438	135927809	(9210827)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	3994815
2714	13.2	2.6	2.1	chr8	139882963	139883388	(5255248)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	4001025
200	24.4	3.7	8.2	chr8	141365642	141365726	(3772910)	C	L2a	LINE/L2	(340)	3086	3006	4003546
1660	19.3	8.6	4.0	chr8	142208676	142209052	(2929584)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	4004651
2003	19.1	6.1	0.5	chr8	142605408	142605781	(2532855)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	4005091
516	15.9	0.9	0.0	chr8	142605791	142605897	(2532739)	C	MSTD-int	LTR/ERVL-MaLR	(10)	1725	1618	4005091
15	31.1	0.0	1.6	chr8	142727285	142727345	(2411291)	+	(CGCCGC)n	Simple_repeat	1	61	(0)	4005232
531	22.7	1.0	0.0	chr8	143346503	143346631	(1792005)	+	FLAM_C	SINE/Alu	18	220	(82)	4006104
1165	26.6	4.0	9.3	chr8	143346647	143346953	(1791683)	C	MSTD	LTR/ERVL-MaLR	(0)	396	88	4006105
52	0.0	0.0	0.0	chr8	143346954	143347000	(1791636)	+	(TTTA)n	Simple_repeat	1	47	(0)	4006106
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
16	23.0	2.7	5.3	chr8	144291884	144291956	(846680)	+	G-rich	Low_complexity	1	75	(0)	4007413
3831	12.7	31.0	1.2	chr9	10436	11574	(138383143)	C	TAR1	Satellite/telo	(13)	2098	469	4008490
2553	9.9	7.7	0.2	chr9	569266	569661	(137825056)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	4009397
1349	21.8	10.9	0.6	chr9	2390975	2391329	(136003388)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	4012056
2920	3.6	0.0	0.0	chr9	2843571	2843877	(135550840)	C	AluY	SINE/Alu	(4)	307	1	4012733
1420	21.6	10.1	2.7	chr9	3015598	3015883	(135378834)	C	MSTD	LTR/ERVL-MaLR	(0)	396	80	4013007
2206	12.5	0.3	0.7	chr9	3015884	3016188	(135378529)	C	AluSq2	SINE/Alu	(9)	304	1	4013008
1726	19.3	11.2	3.3	chr9	3204239	3204466	(135190251)	+	MER39	LTR/ERV1	4	319	(388)	4013299
2092	17.1	3.8	1.0	chr9	3204467	3204851	(135189866)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	4013300
1726	16.9	13.8	6.6	chr9	3204852	3205238	(135189479)	+	MER39	LTR/ERV1	320	706	(1)	4013299
1966	11.2	3.9	1.2	chr9	4645308	4645632	(133749085)	C	MSTC	LTR/ERVL-MaLR	(0)	428	95	4015407
1814	18.2	4.2	0.0	chr9	4645633	4646000	(133748717)	+	L1MB7	LINE/L1	5785	6168	(16)	4015406
1022	22.5	2.8	2.3	chr9	4821436	4821649	(133573068)	C	MSTD	LTR/ERVL-MaLR	(2)	394	180	4015730
485	25.9	0.0	4.9	chr9	4821646	4821796	(133572921)	C	FLAM_C	SINE/Alu	(82)	220	5	4015731
822	25.3	2.6	2.6	chr9	4821778	4821972	(133572745)	C	MSTD	LTR/ERVL-MaLR	(201)	195	1	4015730
12	18.9	7.1	0.0	chr9	6008236	6008277	(132386440)	+	(CTCCCC)n	Simple_repeat	1	45	(0)	4017398
14	23.6	0.0	4.1	chr9	6008355	6008403	(132386314)	+	G-rich	Low_complexity	1	49	(0)	4017399
32	31.4	3.9	0.6	chr9	8857657	8857810	(129536907)	+	(GCC)n	Simple_repeat	1	160	(0)	4021665
10306	10.7	3.4	4.0	chr9	10263187	10264776	(128129941)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	4023527
23	21.8	1.0	8.0	chr9	16727115	16727213	(121667504)	+	(GCGG)n	Simple_repeat	1	100	(0)	4032281
1160	24.0	3.5	8.4	chr9	17517424	17517835	(120876882)	+	MLT1C	LTR/ERVL-MaLR	77	467	(0)	4033437
1040	20.9	2.9	0.0	chr9	18584621	18584821	(119809896)	+	MLT2B3	LTR/ERVL	1	207	(347)	4034864
846	17.0	1.4	0.0	chr9	18584823	18584963	(119809754)	+	MSTD	LTR/ERVL-MaLR	241	383	(13)	4034865
313	21.9	0.0	16.2	chr9	19021065	19021206	(119373511)	+	MLT1O	LTR/ERVL-MaLR	75	193	(349)	4035409
227	37.1	1.3	1.9	chr9	19021383	19021536	(119373181)	C	L3	LINE/CR1	(1380)	2719	2567	4035406
1772	18.1	7.8	2.1	chr9	21766699	21767071	(116627646)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	4039673
3214	26.4	9.2	3.4	chr9	21767077	21767957	(116626760)	C	MSTD-int	LTR/ERVL-MaLR	(5)	1730	794	4039673
23	20.5	4.4	4.2	chr9	21994457	21994547	(116400170)	+	(CCGCAC)n	Simple_repeat	1	95	(0)	4039969
347	34.3	12.9	2.5	chr9	27116583	27116755	(111277962)	C	L2a	LINE/L2	(998)	2421	2244	4046676
2699	5.2	0.0	1.3	chr9	27116860	27117164	(111277553)	C	AluY	SINE/Alu	(10)	301	1	4046680
1557	22.7	10.9	0.0	chr9	32800698	32801050	(105593667)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	4054222
2685	21.9	7.0	1.4	chr9	32801051	32801153	(105593564)	+	L1MC4	LINE/L1	7921	8026	(16)	4054221
2472	5.3	1.6	0.3	chr9	33076868	33077171	(105317546)	+	AluSp	SINE/Alu	2	309	(4)	4054715
270	28.4	1.9	7.3	chr9	33207385	33207452	(105187265)	C	MIRc	SINE/MIR	(121)	147	85	4054947
2359	15.5	2.3	0.3	chr9	33207453	33207840	(105186877)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	4054954
270	28.4	1.9	7.3	chr9	33207841	33207881	(105186836)	C	MIRc	SINE/MIR	(184)	84	45	4054947
1628	10.6	2.1	0.8	chr9	35657504	35657740	(102736977)	+	AluJb	SINE/Alu	1	240	(72)	4059251
2365	14.4	1.8	1.0	chr9	36298997	36299389	(102095328)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	4060361
34	16.9	0.0	0.0	chr9	36400879	36400944	(101993773)	+	(GCCCC)n	Simple_repeat	1	66	(0)	4060561
26	0.0	0.0	0.0	chr9	36401199	36401223	(101993494)	+	(GGGGC)n	Simple_repeat	1	25	(0)	4060562
349	21.4	2.1	0.7	chr9	36486966	36487089	(101907628)	+	MIR3	SINE/MIR	48	173	(95)	4060755
1811	9.4	0.0	0.4	chr9	37661816	37662049	(100732668)	C	7SK	RNA	(98)	233	1	4063145
1587	20.5	11.1	0.3	chr9	37662051	37662387	(100732330)	C	MSTD	LTR/ERVL-MaLR	(17)	379	2	4063146
232	28.2	8.1	6.7	chr9	37662393	37662565	(100732152)	C	L2b	LINE/L2	(34)	3392	3168	4063147
4977	27.3	8.5	2.6	chr9	37688978	37690704	(100704013)	C	HAL1	LINE/L1	(44)	2463	635	4063193
2042	17.6	6.8	0.5	chr9	37690705	37691075	(100703642)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	4063194
4977	27.3	8.5	2.6	chr9	37691076	37691279	(100703438)	C	HAL1	LINE/L1	(1873)	634	407	4063193
879	30.6	22.9	4.1	chr9	42394167	42394998	(95999719)	C	L2a	LINE/L2	(821)	2598	1564	4070012
854	21.1	8.5	3.8	chr9	42394999	42395201	(95999516)	C	MLT1A1	LTR/ERVL-MaLR	(0)	396	137	4070014
1461	20.5	12.4	0.9	chr9	42395202	42395551	(95999166)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	4070015
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
2305	11.7	0.0	0.0	chr9	61546722	61547030	(76847687)	+	AluSx1	SINE/Alu	1	309	(3)	4072073
651	18.7	9.2	2.6	chr9	61547031	61547313	(76847404)	C	MSTD	LTR/ERVL-MaLR	(83)	345	2	4072072
2707	27.2	7.3	5.5	chr9	61855698	61856977	(76537740)	+	SST1	Satellite/centr	263	1561	(2)	4072475
15	5.6	0.0	0.0	chr9	61856982	61857000	(76537717)	+	(TG)n	Simple_repeat	1	19	(0)	4072477
23	25.6	1.7	0.0	chr9	61857000	61857059	(76537658)	+	(TC)n	Simple_repeat	1	61	(0)	4072478
1951	29.4	5.2	6.5	chr9	61857061	61858378	(76536339)	+	SST1	Satellite/centr	262	1562	(1)	4072479
683	18.4	6.3	6.9	chr9	61979689	61979971	(76414746)	+	MSTD	LTR/ERVL-MaLR	2	329	(67)	4072748
2329	11.3	0.0	0.0	chr9	61979972	61980280	(76414437)	C	AluSx1	SINE/Alu	(3)	309	1	4072749
3051	15.5	2.6	0.5	chr9	62838347	62838981	(75555736)	+	TAR1	Satellite/telo	1420	2068	(43)	4073704
415	28.0	2.0	1.0	chr9	63817237	63817537	(74577180)	+	LSAU	Satellite	1	303	(172)	4074767
2605	29.9	5.1	4.7	chr9	65388281	65390272	(73004445)	+	SST1	Satellite/centr	1	2001	(859)	4076190
18	4.7	0.0	0.0	chr9	69760011	69760032	(68634685)	+	(CG)n	Simple_repeat	1	22	(0)	4082050
16	10.7	3.3	0.0	chr9	69760047	69760076	(68634641)	+	(GCC)n	Simple_repeat	1	31	(0)	4082051
268	8.8	1.9	1.9	chr9	70038166	70038638	(68356079)	+	(TGGAA)n	Simple_repeat	1	482	(0)	4082515
1580	20.7	2.9	4.8	chr9	72421077	72421410	(65973307)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	79	4086496
2598	7.2	0.0	0.0	chr9	72421411	72421716	(65973001)	C	AluSx1	SINE/Alu	(6)	306	1	4086497
1208	22.7	14.4	1.4	chr9	73094757	73095100	(65299617)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	4087596
6492	22.9	8.1	3.1	chr9	73095101	73096210	(65298507)	C	MSTD-int	LTR/ERVL-MaLR	(0)	1735	543	4087596
15	33.6	0.0	0.0	chr9	78002344	78002392	(60392325)	+	(AC)n	Simple_repeat	1	49	(0)	4095109
23	18.4	3.1	3.0	chr9	78031965	78032029	(60362688)	+	GA-rich	Low_complexity	1	67	(0)	4095148
24	21.3	2.5	3.6	chr9	78032030	78032043	(60362674)	+	G-rich	Low_complexity	3	83	(0)	4095149
1085	19.5	7.2	4.5	chr9	78588772	78589117	(59805600)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	4095998
17	29.5	0.0	1.7	chr9	79171041	79171100	(59223617)	+	(GTT)n	Simple_repeat	1	60	(0)	4096845
1014	21.9	3.4	0.9	chr9	79171251	79171556	(59223161)	+	MSTD	LTR/ERVL-MaLR	2	382	(14)	4096846
1842	18.3	5.3	7.3	chr9	79491973	79492413	(58902304)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	4097324
1778	20.6	2.6	1.1	chr9	79526647	79527028	(58867689)	+	MSTD	LTR/ERVL-MaLR	1	388	(8)	4097375
19	7.2	0.0	0.0	chr9	79571362	79571390	(58823327)	+	(CCA)n	Simple_repeat	1	29	(0)	4097445
14	10.8	3.1	3.0	chr9	79571404	79571435	(58823282)	+	(GCA)n	Simple_repeat	1	33	(0)	4097446
2275	10.8	0.3	0.0	chr9	80311553	80311849	(58082868)	+	AluSg	SINE/Alu	2	299	(11)	4098456
985	20.4	14.5	5.3	chr9	80311850	80312122	(58082595)	+	MSTD	LTR/ERVL-MaLR	82	381	(15)	4098455
1921	23.1	6.6	1.5	chr9	83322956	83323401	(55071316)	+	L1ME3	LINE/L1	5410	5888	(274)	4102683
1659	14.8	21.3	0.6	chr9	83323402	83323740	(55070977)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	4102688
5420	26.2	4.2	7.9	chr9	83543110	83545346	(54849371)	+	L1PA15-16	LINE/L1	284	2144	(4709)	4103075
14	9.3	0.0	0.0	chr9	83707680	83707702	(54687015)	+	(GGC)n	Simple_repeat	1	23	(0)	4103350
12	23.6	4.4	0.0	chr9	83707852	83707896	(54686821)	+	(GGCGCA)n	Simple_repeat	1	47	(0)	4103351
2219	10.2	3.6	0.0	chr9	84514851	84515143	(53879574)	+	AluSg4	SINE/Alu	1	304	(6)	4104851
1906	11.5	8.6	0.4	chr9	85420188	85420465	(52974252)	+	AluSx	SINE/Alu	1	303	(9)	4106184
1065	22.3	14.9	3.7	chr9	85420466	85420718	(52973999)	+	MSTD	LTR/ERVL-MaLR	90	396	(0)	4106183
526	29.7	11.6	5.9	chr9	85420719	85421173	(52973544)	C	MLT1J	LTR/ERVL-MaLR	(3)	509	26	4106185
1793	17.4	11.6	0.8	chr9	86101425	86101777	(52292940)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	4107304
1906	17.8	6.3	2.9	chr9	86178530	86178911	(52215806)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	4107447
1985	21.0	10.8	0.8	chr9	88207787	88208415	(50186302)	+	L1M5	LINE/L1	5129	5823	(350)	4110667
1017	16.2	1.2	0.0	chr9	88208421	88208580	(50186137)	C	MSTD	LTR/ERVL-MaLR	(0)	396	235	4110676
500	24.1	2.1	0.0	chr9	88208613	88208753	(50185964)	C	L1M5	LINE/L1	(828)	5318	5175	4110677
2247	9.5	0.7	0.3	chr9	88329873	88330167	(50064550)	+	AluSq2	SINE/Alu	13	308	(5)	4110919
1895	16.3	6.4	4.9	chr9	88330168	88330489	(50064228)	C	MSTD	LTR/ERVL-MaLR	(63)	333	1	4110918
1897	32.8	7.0	3.1	chr9	90116053	90117056	(48277661)	+	L2a	LINE/L2	416	1461	(1958)	4113423
892	19.9	14.8	6.6	chr9	90117057	90117389	(48277328)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	4113424
1146	22.4	20.9	0.3	chr9	90581228	90581549	(47813168)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	3	4114033
2437	12.4	3.1	2.0	chr9	92868480	92868892	(45525825)	C	MSTB1	LTR/ERVL-MaLR	(0)	465	41	4117341
792	17.8	1.6	1.6	chr9	92868893	92869021	(45525696)	C	AluJr	SINE/Alu	(181)	131	3	4117342
953	22.1	6.0	0.7	chr9	93103276	93103585	(45291132)	C	MER2	DNA/TcMar-Tigger	(5)	340	2	4117721
4316	25.6	3.7	10.5	chr9	93103593	93103619	(45291098)	C	L1MB4	LINE/L1	(2144)	4238	4216	4117716
1768	18.7	8.1	0.8	chr9	93103620	93103986	(45290731)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	4117722
303	31.0	4.2	1.2	chr9	93906853	93907012	(44487705)	+	L1ME3G	LINE/L1	745	909	(15)	4118728
1604	18.9	17.2	0.3	chr9	93907028	93907366	(44487351)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	4118730
2334	13.8	6.5	3.6	chr9	96202930	96203343	(42191374)	+	MSTC	LTR/ERVL-MaLR	1	427	(1)	4122401
1654	17.4	11.4	3.8	chr9	97393966	97394330	(41000387)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	4124452
420	33.8	3.0	2.6	chr9	97394485	97394788	(40999929)	+	L1ME3G	LINE/L1	68	372	(552)	4124453
206	33.3	1.4	0.0	chr9	98231087	98231155	(40163562)	C	MIRc	SINE/MIR	(81)	187	118	4126119
13	12.8	5.6	2.6	chr9	98231214	98231249	(40163468)	+	GA-rich	Low_complexity	1	38	(0)	4126120
26	0.0	0.0	0.0	chr9	98231280	98231304	(40163413)	+	(T)n	Simple_repeat	1	25	(0)	4126121
1333	18.9	15.9	0.9	chr9	109099753	109100088	(29294629)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	4143793
218	25.4	17.9	0.8	chr9	111117473	111117606	(27277111)	C	MIRb	SINE/MIR	(77)	191	26	4147338
1863	21.8	2.5	1.0	chr9	111117894	111118283	(27276434)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	4147339
2248	13.6	0.0	0.0	chr9	111680215	111680523	(26714194)	C	AluSz	SINE/Alu	(3)	309	1	4148346
6288	17.6	2.6	3.6	chr9	111680524	111680560	(26714157)	+	L1MC3	LINE/L1	6949	6978	(807)	4148344
1929	18.1	3.5	2.5	chr9	111680561	111680952	(26713765)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	4148347
2096	13.2	2.7	0.0	chr9	112526258	112526545	(25868172)	C	AluSz6	SINE/Alu	(16)	296	1	4150032
1282	18.9	14.2	5.3	chr9	112526546	112526853	(25867864)	C	MSTD	LTR/ERVL-MaLR	(39)	357	1	4150031
483	29.4	16.2	1.1	chr9	113665690	113666050	(24728667)	+	L2c	LINE/L2	2920	3345	(42)	4152132
27	0.0	0.0	0.0	chr9	113666148	113666173	(24728544)	+	(AATA)n	Simple_repeat	1	26	(0)	4152133
14	16.9	3.9	5.6	chr9	113851584	113851636	(24543081)	+	(CCCG)n	Simple_repeat	1	52	(0)	4152503
4475	23.6	9.4	2.1	chr9	113851642	113853037	(24541680)	C	L1M4a1	LINE/L1	(1237)	2202	867	4152498
234	28.7	6.5	4.7	chr9	114215163	114215268	(24179449)	C	MIRc	SINE/MIR	(142)	126	19	4153188
205	30.3	5.6	1.0	chr9	114387525	114387660	(24007057)	C	MIR3	SINE/MIR	(42)	188	40	4153556
1511	18.4	11.7	1.7	chr9	114838789	114839142	(23555575)	C	MSTD	LTR/ERVL-MaLR	(2)	394	1	4154537
1513	8.9	1.0	0.0	chr9	121093917	121094107	(17300610)	+	AluSc8	SINE/Alu	89	281	(30)	4166339
1761	17.1	7.9	6.0	chr9	121094166	121094551	(17300166)	C	MSTD	LTR/ERVL-MaLR	(2)	394	1	4166340
965	23.1	16.6	2.9	chr9	123672425	123672522	(14722195)	C	L1MC4	LINE/L1	(142)	7900	7783	4171116
1631	16.6	15.7	1.5	chr9	123672523	123672859	(14721858)	+	MSTD	LTR/ERVL-MaLR	1	394	(2)	4171117
965	23.6	34.3	1.8	chr9	123672860	123673266	(14721451)	C	L1MC4	LINE/L1	(260)	7782	7238	4171116
1296	11.2	6.6	1.0	chr9	125386193	125386391	(13008326)	C	MSTD	LTR/ERVL-MaLR	(0)	396	186	4174562
1836	7.5	0.0	0.0	chr9	125386396	125386621	(13008096)	C	AluY	SINE/Alu	(3)	308	83	4174563
1385	29.1	8.0	4.3	chr9	126390970	126391719	(12002998)	+	L1MC5a	LINE/L1	1887	2205	(572)	4176351
29	29.4	0.9	2.6	chr9	126860601	126860713	(11534004)	+	G-rich	Low_complexity	1	114	(0)	4177201
405	26.2	5.5	10.9	chr9	126914200	126914392	(11480325)	+	MIR3	SINE/MIR	23	204	(4)	4177307
12	22.8	3.2	6.2	chr9	126914557	126914619	(11480098)	+	G-rich	Low_complexity	1	65	(0)	4177308
19	23.6	0.0	8.1	chr9	126914809	126914895	(11479822)	+	(CGGCC)n	Simple_repeat	1	87	(0)	4177309
14	30.1	3.3	3.2	chr9	127612184	127612273	(10782444)	+	(CCCCGC)n	Simple_repeat	1	93	(0)	4178642
26	21.7	2.4	3.5	chr9	127802798	127802882	(10591835)	+	(GGCGG)n	Simple_repeat	1	87	(0)	4179046
426	23.3	1.0	2.8	chr9	128177855	128177960	(10216757)	C	MIRb	SINE/MIR	(120)	148	45	4179904
300	23.2	17.0	4.5	chr9	128177956	128178104	(10216613)	C	MIR3	SINE/MIR	(38)	170	7	4179905
210	32.4	2.6	0.0	chr9	128203054	128203127	(10191590)	+	MIR1_Amn	SINE/MIR	91	166	(64)	4179970
13	25.1	3.9	4.9	chr9	128552302	128552379	(9842338)	+	(CCCTCGC)n	Simple_repeat	1	81	(0)	4180816
12	12.0	3.7	0.0	chr9	128552423	128552449	(9842268)	+	G-rich	Low_complexity	1	28	(0)	4180817
13	8.5	0.0	14.0	chr9	128552779	128552828	(9841889)	+	(GGCGG)n	Simple_repeat	1	50	(0)	4180818
2349	9.6	0.0	0.0	chr9	129625730	129626030	(8768687)	+	AluSz	SINE/Alu	1	301	(11)	4183280
937	22.1	32.1	0.3	chr9	130549160	130549445	(7845272)	+	MLT1J2	LTR/ERVL-MaLR	12	388	(60)	4185283
1513	10.7	0.4	0.0	chr9	130549456	130549680	(7845037)	+	MER57B1	LTR/ERV1	1	226	(175)	4185284
946	22.4	10.9	1.4	chr9	131300020	131300300	(7094417)	C	MSTD	LTR/ERVL-MaLR	(1)	395	85	4186764
8215	6.1	1.1	0.1	chr9	133040778	133041774	(5352943)	+	LTR13	LTR/ERVK	1	1007	(0)	4189968
21	16.3	1.7	4.9	chr9	133460213	133460272	(4934445)	+	(CCCGC)n	Simple_repeat	1	61	(0)	4190625
102	28.2	2.0	1.7	chr9	134189348	134189691	(4205026)	+	GA-rich	Low_complexity	1	351	(0)	4191695
1679	23.3	2.8	1.3	chr9	134736204	134736590	(3658127)	C	MSTD	LTR/ERVL-MaLR	(3)	393	1	4192387
1081	23.8	11.2	1.7	chr9	136279741	136280086	(2114631)	+	MSTD	LTR/ERVL-MaLR	1	383	(13)	4194216
214	38.1	3.3	3.9	chr9	136280136	136280288	(2114429)	+	L2a	LINE/L2	3183	3334	(92)	4194217
17	22.2	2.8	5.5	chr9	136439816	136439886	(1954831)	+	(GCCCC)n	Simple_repeat	1	73	(0)	4194378
603	10.3	0.0	16.6	chr9	136731500	136731548	(1663169)	+	L1MB3	LINE/L1	6138	6181	(2)	4194723
1249	16.7	26.1	0.3	chr9	136731571	136731871	(1662846)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	3	4194726
1252	16.0	0.0	0.4	chr9	136738182	136738407	(1656310)	C	MER72	LTR/ERV1	(37)	685	461	4194741
514	21.7	0.9	0.0	chr9	136738460	136738565	(1656152)	C	MER72	LTR/ERV1	(594)	128	22	4194741
211	35.0	3.2	8.4	chr9	136738648	136738909	(1655808)	+	L2a	LINE/L2	2946	3193	(182)	4194742
1706	17.5	13.2	0.0	chrX	3282955	3283296	(152757599)	+	MSTD	LTR/ERVL-MaLR	1	394	(2)	4364594
1807	16.1	0.7	3.5	chrX	3394568	3394883	(152646012)	+	AluJr	SINE/Alu	5	311	(1)	4364787
2687	14.3	0.2	5.1	chrX	3394884	3395287	(152645608)	+	MSTC	LTR/ERVL-MaLR	37	428	(0)	4364786
235	25.0	11.4	5.3	chrX	10189374	10189504	(145851391)	+	MER5B	DNA/hAT-Charlie	39	178	(0)	4376090
12	0.0	9.1	0.0	chrX	10189891	10189912	(145850983)	+	(TGAA)n	Simple_repeat	1	24	(0)	4376091
1652	20.2	7.1	1.3	chrX	12568877	12569248	(143471647)	+	MSTD	LTR/ERVL-MaLR	2	396	(0)	4379745
2349	17.3	1.0	1.0	chrX	12795424	12795814	(143245081)	C	MSTD	LTR/ERVL-MaLR	(5)	391	1	4380121
18	23.8	3.8	3.7	chrX	13689321	13689399	(142351496)	+	G-rich	Low_complexity	1	82	(0)	4381610
2365	12.0	8.2	2.7	chrX	13828157	13828559	(142212336)	+	MSTC	LTR/ERVL-MaLR	1	427	(1)	4381798
1746	13.2	16.2	1.2	chrX	14779367	14779712	(141261183)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	4383220
1355	15.0	18.2	7.2	chrX	14888913	14889271	(141151624)	C	MLT1A1	LTR/ERVL-MaLR	(1)	407	1	4383403
1060	21.0	16.4	6.8	chrX	14953208	14953422	(141087473)	C	MSTC	LTR/ERVL-MaLR	(0)	428	204	4383527
1915	17.4	0.0	0.7	chrX	14953423	14953720	(141087175)	C	AluJr	SINE/Alu	(15)	297	2	4383528
2137	17.1	1.1	0.6	chrX	15759257	15759610	(140281285)	+	MLT1A0	LTR/ERVL-MaLR	10	365	(0)	4384909
2181	9.4	0.0	1.7	chrX	15759735	15760053	(140280842)	C	AluSx	SINE/Alu	(0)	312	1	4384910
2116	19.2	0.5	2.0	chrX	16037110	16037507	(140003388)	+	MSTD	LTR/ERVL-MaLR	5	396	(0)	4385408
2210	17.0	3.0	1.5	chrX	16645677	16646065	(139394830)	+	MSTD	LTR/ERVL-MaLR	1	395	(1)	4386380
2085	16.3	7.3	0.3	chrX	18091291	18091658	(137949237)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	4388887
378	25.6	0.0	0.0	chrX	18091664	18091741	(137949154)	C	MLT1J	LTR/ERVL-MaLR	(429)	83	6	4388886
15	8.8	5.0	4.8	chrX	18147068	18147107	(137893788)	+	(AGAGGCC)n	Simple_repeat	1	42	(0)	4388968
2319	24.3	11.3	20.5	chrX	18975516	18975967	(137064928)	+	L2	LINE/L2	2425	2888	(531)	4390477
2258	9.9	0.0	0.0	chrX	18975968	18976274	(137064621)	C	AluSx1	SINE/Alu	(0)	312	1	4390480
4682	16.2	2.1	3.0	chrX	19748957	19749840	(136291055)	+	L1MB4	LINE/L1	5295	6178	(2)	4391878
413	23.6	19.4	2.0	chrX	19749862	19750060	(136290835)	C	MIR	SINE/MIR	(0)	262	21	4391879
2009	12.1	1.1	0.4	chrX	19750065	19750345	(136290550)	C	AluSz	SINE/Alu	(15)	297	15	4391880
500	33.1	6.0	3.5	chrX	20408248	20408507	(135632388)	C	MamRep605	LTR?	(135)	714	448	4393106
2282	19.5	7.5	2.1	chrX	20408624	20409100	(135631795)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	4393107
2148	15.9	0.8	13.9	chrX	21810131	21810583	(134230312)	C	MSTD	LTR/ERVL-MaLR	(0)	396	4	4394961
1844	18.7	5.0	0.8	chrX	22865396	22865756	(133175139)	+	MSTD	LTR/ERVL-MaLR	1	377	(19)	4396638
803	18.9	0.0	7.6	chrX	22865787	22865920	(133174975)	+	L1ME1	LINE/L1	5701	5820	(359)	4396636
2178	13.0	0.0	0.3	chrX	23900392	23900699	(132140196)	+	AluSz	SINE/Alu	1	307	(5)	4398349
417	27.2	6.5	6.7	chrX	23900700	23900764	(132140131)	C	MIRc	SINE/MIR	(167)	101	31	4398348
11	20.6	5.1	0.0	chrX	24150109	24150147	(131890748)	+	(AGGCCGA)n	Simple_repeat	1	41	(0)	4398943
23	20.0	4.2	2.7	chrX	24150334	24150405	(131890490)	+	(GGC)n	Simple_repeat	1	75	(0)	4398944
1563	20.3	5.4	5.2	chrX	24445603	24446008	(131594887)	C	MLT1A1	LTR/ERVL-MaLR	(1)	407	1	4399535
2445	14.6	9.5	5.4	chrX	24446014	24446477	(131594418)	+	MLT1D	LTR/ERVL-MaLR	21	505	(0)	4399536
1391	17.1	16.7	2.9	chrX	26398138	26398487	(129642408)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	4402325
1488	22.3	3.1	0.3	chrX	30904978	30905355	(125135540)	C	L1ME3A	LINE/L1	(7)	6166	5778	4408948
1377	19.9	2.5	0.0	chrX	30905358	30905632	(125135263)	C	MSTD	LTR/ERVL-MaLR	(2)	394	113	4408949
4483	11.3	7.0	2.5	chrX	30905633	30906474	(125134421)	+	MER4D1	LTR/ERV1	1	827	(73)	4408950
264	37.7	11.7	2.4	chrX	31554707	31555038	(124485857)	C	L2c	LINE/L2	(0)	3387	3021	4409979
783	23.4	2.3	2.3	chrX	31555126	31555300	(124485595)	C	MER63A	DNA/hAT-Blackjack	(1)	209	35	4409980
667	22.6	11.2	0.5	chrX	31655326	31655525	(124385370)	+	MSTD-int	LTR/ERVL-MaLR	1147	1370	(1)	4410151
1646	18.0	10.1	1.9	chrX	31655527	31655889	(124385006)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	4410151
391	34.1	9.1	1.7	chrX	31655915	31656147	(124384748)	C	L2	LINE/L2	(925)	2494	2243	4410152
1463	24.5	4.1	2.1	chrX	35088245	35088627	(120952268)	C	MSTD	LTR/ERVL-MaLR	(0)	396	6	4414626
3686	17.6	11.8	0.9	chrX	38592772	38593364	(117447531)	C	L1MEc	LINE/L1	(4435)	1965	1264	4419224
3078	19.4	6.3	9.2	chrX	38593349	38593501	(117447394)	C	L1MC4a	LINE/L1	(1090)	6792	6634	4419228
1733	20.6	4.5	1.8	chrX	38593502	38593886	(117447009)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	4419229
22	13.1	6.0	0.0	chrX	38804021	38804070	(117236825)	+	(CCTGC)n	Simple_repeat	1	53	(0)	4419535
12	16.9	4.5	4.3	chrX	40154706	40154749	(115886146)	+	(GCAGG)n	Simple_repeat	1	46	(0)	4421861
19	29.7	3.8	1.2	chrX	40154959	40155038	(115885857)	+	(CG)n	Simple_repeat	1	83	(0)	4421862
957	24.6	12.1	6.5	chrX	40221676	40222088	(115818807)	C	MLT1H	LTR/ERVL-MaLR	(0)	549	111	4422004
864	24.9	9.0	2.7	chrX	40222101	40222401	(115818494)	+	MLT1E1A	LTR/ERVL-MaLR	3	324	(236)	4422005
1439	16.4	9.4	1.6	chrX	40222402	40222657	(115818238)	+	AluJr	SINE/Alu	1	278	(34)	4422006
12140	8.2	0.8	0.5	chrX	40430712	40432287	(115608608)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	4422448
660	26.0	5.1	4.6	chrX	40464304	40464647	(115576248)	+	MLT1J2	LTR/ERVL-MaLR	60	448	(0)	4422508
2363	15.8	2.1	0.3	chrX	40573724	40574103	(115466792)	+	MSTD	LTR/ERVL-MaLR	1	387	(9)	4422755
3631	12.3	1.8	1.8	chrX	40574115	40574182	(115466713)	+	L1MB3	LINE/L1	5613	5681	(502)	4422754
1740	14.9	13.9	0.3	chrX	42417629	42417970	(113622925)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	4425955
1671	19.1	8.8	3.7	chrX	42726193	42726567	(113314328)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	4426377
1521	14.6	18.9	0.6	chrX	43433102	43433424	(112607471)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	4427311
1546	24.7	5.1	0.5	chrX	44432391	44432805	(111608090)	+	LTR16A	LTR/ERVL	17	451	(0)	4428851
876	16.5	0.0	0.0	chrX	44432837	44432963	(111607932)	+	AluJo	SINE/Alu	1	127	(185)	4428852
12	7.7	0.0	9.1	chrX	44872809	44872841	(111168054)	+	(CCTCC)n	Simple_repeat	1	33	(0)	4429938
1639	20.3	6.9	0.8	chrX	45741413	45741795	(110299100)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	4431156
3823	23.7	10.6	14.3	chrX	45741796	45742323	(110298572)	+	MLT1A1-int	LTR/ERVL-MaLR	1	528	(1207)	4431156
18	18.3	0.0	0.0	chrX	47233068	47233104	(108807791)	+	(GCG)n	Simple_repeat	1	37	(0)	4433638
13	14.8	0.0	3.1	chrX	47233316	47233347	(108807548)	+	G-rich	Low_complexity	1	32	(0)	4433639
1885	22.3	3.8	2.3	chrX	47834602	47834991	(108205904)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	4434900
3292	15.5	7.1	0.7	chrX	47835029	47835646	(108205249)	+	LTR65	LTR/ERV1	9	669	(0)	4434901
1217	15.9	0.5	0.0	chrX	63560233	63560452	(92480443)	C	L1MA4	LINE/L1	(9)	6291	6071	4450260
185	28.3	0.0	3.6	chrX	63560474	63560528	(92480367)	+	MIR	SINE/MIR	17	69	(193)	4450261
278	34.5	2.5	1.6	chrX	67952279	67952399	(88088496)	+	MER5A	DNA/hAT-Charlie	44	165	(24)	4455452
1858	20.6	4.1	0.8	chrX	67952507	67952887	(88088008)	C	MSTD	LTR/ERVL-MaLR	(0)	396	3	4455453
3484	16.5	5.1	1.4	chrX	69598000	69599205	(86441690)	+	L1MD1	LINE/L1	4603	5838	(404)	4458458
2366	15.5	0.8	2.0	chrX	69599207	69599607	(86441288)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	4458459
9826	18.0	3.3	2.9	chrX	69667413	69667696	(86373199)	C	L1MA9	LINE/L1	(2810)	4749	4465	4458557
2283	16.4	2.8	0.3	chrX	69667697	69668082	(86372813)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	4458560
1722	28.6	11.2	2.9	chrX	71085504	71086420	(84954475)	+	L4_B_Mam	LINE/RTE-X	3583	4822	(316)	4460781
8682	15.7	3.3	2.0	chrX	73012064	73013510	(83027385)	C	ERVL-int	LTR/ERVL	(2730)	3027	1562	4464147
2476	17.3	0.0	1.0	chrX	73013511	73013907	(83026988)	C	MSTD	LTR/ERVL-MaLR	(0)	396	4	4464150
1240	18.1	6.2	0.8	chrX	73013913	73014157	(83026738)	C	MSTD-int	LTR/ERVL-MaLR	(6)	1729	1471	4464150
15	21.4	4.4	0.0	chrX	73944061	73944105	(82096790)	+	A-rich	Low_complexity	1	47	(0)	4464970
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
1596	18.4	2.5	3.1	chrX	74606854	74607141	(81433754)	+	AluSz	SINE/Alu	1	286	(26)	4465891
2580	12.3	5.9	0.8	chrX	74916354	74916753	(81124142)	+	MSTC	LTR/ERVL-MaLR	7	428	(0)	4466259
1501	33.2	5.0	12.1	chrX	76686115	76687863	(79353032)	C	L1PB4	LINE/L1	(4839)	2014	425	4467637
658	28.6	17.1	2.4	chrX	79356830	79357247	(76683648)	+	LTR33	LTR/ERVL	1	515	(0)	4470773
469	29.1	5.9	0.5	chrX	95436978	95437187	(60603708)	C	MLT1-int	LTR/ERVL-MaLR	(439)	1050	676	4487926
2033	21.9	6.2	0.7	chrX	95437184	95437749	(60603146)	C	MLT1-int	LTR/ERVL-MaLR	(639)	732	4	4487926
746	29.8	3.5	0.5	chrX	97713927	97714145	(58326750)	+	MIR	SINE/MIR	24	249	(13)	4491126
1903	20.5	1.8	2.3	chrX	98630199	98630587	(57410308)	C	MSTD	LTR/ERVL-MaLR	(0)	396	10	4492289
1790	17.5	3.8	0.7	chrX	103443326	103443630	(52597265)	+	MSTD	LTR/ERVL-MaLR	82	396	(0)	4498625
2045	17.6	1.6	1.9	chrX	104534985	104535216	(51505679)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	136	4500348
1483	21.6	9.3	5.6	chrX	104535217	104535608	(51505287)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	4500349
1382	24.1	5.1	2.6	chrX	105152627	105153005	(50887890)	+	MSTD	LTR/ERVL-MaLR	8	396	(0)	4501133
272	13.2	0.0	0.0	chrX	105153052	105153089	(50887806)	C	AluYg6	SINE/Alu	(17)	294	257	4501134
16	8.2	0.0	0.0	chrX	107732196	107732221	(48308674)	+	(CCTCC)n	Simple_repeat	1	26	(0)	4504724
9984	14.3	3.0	0.5	chrX	107818416	107820006	(48220889)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	4504909
565	23.6	5.1	3.9	chrX	108449463	108449547	(47591348)	+	Charlie1a	DNA/hAT-Charlie	1	93	(1362)	4505837
1824	17.0	1.9	4.8	chrX	108449548	108449923	(47590972)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	4505838
14	19.7	2.3	2.3	chrX	111681582	111681624	(44359271)	+	(CTCCGC)n	Simple_repeat	1	44	(0)	4510263
2140	23.1	5.9	3.0	chrX	111794416	111794569	(44246326)	C	L1ME1	LINE/L1	(1588)	4558	4382	4510407
1777	14.4	8.0	4.9	chrX	111794570	111794918	(44245977)	C	MLT1A0	LTR/ERVL-MaLR	(3)	362	2	4510415
2140	23.2	6.1	3.1	chrX	111794919	111795529	(44245366)	C	L1ME1	LINE/L1	(1765)	4381	3740	4510407
790	25.7	1.1	3.6	chrX	112728139	112728253	(43312642)	C	MER63A	DNA/hAT-Blackjack	(6)	204	94	4511786
2158	16.5	8.1	1.1	chrX	112728254	112728621	(43312274)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	4511787
790	25.7	1.1	3.6	chrX	112728622	112728699	(43312196)	C	MER63A	DNA/hAT-Blackjack	(117)	93	16	4511786
2855	15.6	15.4	1.5	chrX	114914597	114914827	(41126068)	+	MER39	LTR/ERV1	1	331	(376)	4514674
1856	20.7	1.0	7.8	chrX	114914828	114915252	(41125643)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	4514675
1552	22.6	7.8	1.3	chrX	117225527	117225907	(38814988)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	4517493
6981	22.7	5.7	4.2	chrX	117225908	117227615	(38813280)	+	MLT1A1-int	LTR/ERVL-MaLR	1	1735	(0)	4517493
1729	17.9	5.3	6.5	chrX	118030528	118030928	(38009967)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	4518448
338	33.5	12.4	2.6	chrX	118030929	118031195	(38009700)	C	HAL1	LINE/L1	(1968)	539	238	4518447
2589	15.7	0.2	0.5	chrX	118876878	118877274	(37163621)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	4520058
216	27.2	8.1	7.3	chrX	118877275	118877397	(37163498)	+	L2a	LINE/L2	2833	2956	(463)	4520061
972	22.1	17.9	2.9	chrX	118906728	118907071	(37133824)	C	MLT1A1	LTR/ERVL-MaLR	(1)	407	1	4520112
13	16.2	0.0	0.0	chrX	119236159	119236186	(36804709)	+	G-rich	Low_complexity	1	28	(0)	4520704
2947	12.5	0.5	1.9	chrX	120204122	120204552	(35836343)	C	MSTC	LTR/ERVL-MaLR	(0)	428	4	4522583
1185	23.9	1.4	2.4	chrX	120339552	120339847	(35701048)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	82	4522789
876	18.5	0.0	0.0	chrX	120339892	120340021	(35700874)	C	FLAM_C	SINE/Alu	(12)	131	2	4522790
1037	25.0	7.4	5.5	chrX	120340026	120340368	(35700527)	+	MLT1A	LTR/ERVL-MaLR	25	374	(0)	4522791
2055	13.5	11.0	0.0	chrX	123551914	123552262	(32488633)	+	MSTD	LTR/ERVL-MaLR	3	394	(2)	4526920
1696	16.2	2.6	3.1	chrX	123552265	123552615	(32488280)	C	MLT1A0	LTR/ERVL-MaLR	(16)	349	1	4526921
9697	13.3	1.9	6.8	chrX	123931175	123931533	(32109362)	+	THE1C-int	LTR/ERVL-MaLR	3	369	(1262)	4527739
30	0.0	0.0	0.0	chrX	123931534	123931561	(32109334)	+	(CTTT)n	Simple_repeat	1	28	(0)	4527741
4166	26.5	4.5	4.2	chrX	129393293	129395960	(26644935)	+	L1MA7	LINE/L1	1216	3428	(4137)	4534626
14	9.3	0.0	0.0	chrX	130120918	130120940	(25919955)	+	(AGG)n	Simple_repeat	1	23	(0)	4535994
18	16.8	0.0	0.0	chrX	130268800	130268834	(25772061)	+	GA-rich	Low_complexity	1	35	(0)	4536265
243	29.0	2.8	4.2	chrX	130772865	130772936	(25267959)	+	L2a	LINE/L2	3344	3414	(12)	4537066
2190	15.3	7.4	0.3	chrX	134983694	134984072	(21056823)	+	MLT1A1	LTR/ERVL-MaLR	1	408	(0)	4543773
2571	12.8	0.2	2.0	chrX	134984073	134984338	(21056557)	C	MLT1B	LTR/ERVL-MaLR	(126)	264	1	4543772
8720	5.2	0.6	0.5	chrX	135206317	135207322	(20833573)	+	LTR13	LTR/ERVK	1	1007	(0)	4544065
505	28.4	3.8	4.1	chrX	135342731	135342989	(20697906)	C	MIRb	SINE/MIR	(2)	266	2	4544200
18	4.1	0.0	0.0	chrX	135343066	135343090	(20697805)	+	(ACA)n	Simple_repeat	1	25	(0)	4544201
330	12.0	0.0	0.0	chrX	135343182	135343231	(20697664)	+	HERVL-int	LTR/ERVL	1768	1817	(3837)	4544202
800	27.7	3.4	3.4	chrX	136039749	136040013	(20000882)	+	MIRc	SINE/MIR	3	267	(1)	4545260
1274	20.4	11.9	3.9	chrX	136815416	136815778	(19225117)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	4546648
2290	14.7	4.2	3.7	chrX	138829186	138829615	(17211280)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	4549780
1060	27.1	1.3	8.1	chrX	138829616	138829725	(17211170)	+	MSTD	LTR/ERVL-MaLR	232	328	(68)	4549779
2285	10.3	0.0	0.7	chrX	138829726	138830017	(17210878)	C	AluSx	SINE/Alu	(21)	291	2	4549781
1373	22.0	11.4	4.1	chrX	139857883	139858247	(16182648)	+	MSTD	LTR/ERVL-MaLR	2	396	(0)	4551255
517	32.1	5.0	2.7	chrX	139858263	139858557	(16182338)	+	L2	LINE/L2	2076	2377	(1042)	4551254
313	26.0	2.0	4.8	chrX	140731305	140731409	(15309486)	+	MIR	SINE/MIR	16	117	(145)	4552699
752	26.1	1.6	1.6	chrX	140731407	140731589	(15309306)	+	MIRb	SINE/MIR	13	195	(73)	4552700
2797	11.9	3.0	0.9	chrX	141002791	141003240	(15037655)	C	LTR46	LTR/ERV1	(0)	460	1	4553136
1652	21.2	9.7	0.0	chrX	144561091	144561443	(11479452)	C	MSTD	LTR/ERVL-MaLR	(5)	391	1	4558005
2611	25.9	4.2	1.1	chrX	146762481	146763640	(9277255)	C	L1M2	LINE/L1	(4158)	2691	1515	4560929
2156	24.5	3.2	1.2	chrX	148086538	148087031	(7953864)	+	L1ME3D	LINE/L1	3286	3795	(2351)	4562816
1656	17.8	10.3	2.2	chrX	148087032	148087394	(7953501)	C	MSTD	LTR/ERVL-MaLR	(0)	396	1	4562817
2314	25.6	5.4	2.3	chrX	148188044	148188906	(7851989)	C	L1ME3E	LINE/L1	(47)	6195	5305	4562965
1049	28.8	6.8	5.4	chrX	148188908	148189543	(7851352)	C	L1ME3E	LINE/L1	(3746)	2400	1760	4562965
725	14.5	5.9	12.2	chrX	150705784	150705964	(5334931)	+	L1MD1	LINE/L1	4644	4812	(1725)	4566339
1074	19.5	8.9	3.6	chrX	150705965	150706317	(5334578)	C	MSTC	LTR/ERVL-MaLR	(0)	428	7	4566340
518	20.1	0.0	5.8	chrX	150706319	150706505	(5334390)	C	L1M3	LINE/L1	(612)	5571	5213	4566341
15	4.7	4.5	0.0	chrX	150898705	150898726	(5142169)	+	(GC)n	Simple_repeat	1	23	(0)	4566675
14	16.4	2.9	0.0	chrX	150898886	150898919	(5141976)	+	G-rich	Low_complexity	1	35	(0)	4566676
196	26.4	16.7	0.0	chrX	151082245	151082369	(4958526)	+	MIR3	SINE/MIR	40	189	(19)	4567087
1111	23.0	3.3	5.7	chrX	151157579	151157892	(4883003)	C	MLT1C	LTR/ERVL-MaLR	(86)	381	76	4567196
1285	22.0	1.7	4.4	chrX	151157920	151158145	(4882750)	C	MLT1B	LTR/ERVL-MaLR	(0)	426	169	4567197
62	3.2	0.0	1.5	chrX	151158146	151158211	(4882684)	+	(TC)n	Simple_repeat	1	66	(0)	4567198
2222	13.9	0.3	0.0	chrX	153563131	153563440	(2477455)	C	AluJb	SINE/Alu	(1)	311	1	4570406
1952	17.1	1.5	5.6	chrY	10143657	10144064	(47083351)	+	MSTD	LTR/ERVL-MaLR	4	394	(2)	4587712
28	9.5	0.0	0.0	chrY	10666839	10666883	(46560532)	+	(CACTC)n	Simple_repeat	1	45	(0)	4587932
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
1464	23.6	8.9	4.8	chrY	11281374	11281813	(45945602)	C	MER21C	LTR/ERVL	(22)	916	457	4589057
249	31.4	10.8	10.1	chrY	11287602	11287738	(45939677)	C	LTR48	LTR/ERV1	(13)	631	502	4589062
27	0.0	3.3	0.0	chrY	11287739	11287768	(45939647)	+	(AAAAC)n	Simple_repeat	1	31	(0)	4589063
307	25.3	11.2	7.7	chrY	11287769	11288013	(45939402)	C	LTR48	LTR/ERV1	(143)	501	189	4589062