14	18.2	6.8	0.0	chr1	2227254	2227297	(246729125)	+	G-rich	Low_complexity	1	47	(0)	3035
141	37.7	1.1	3.3	chr1	2630262	2631097	(246325325)	+	(GT)n	Simple_repeat	1	845	(0)	3416
112	29.5	1.2	0.0	chr1	6033196	6033515	(242922907)	+	(TGTGTG)n	Simple_repeat	1	324	(0)	7592
306	23.5	4.2	6.5	chr1	6033543	6033665	(242922757)	+	L1MC4	LINE/L1	7919	8038	(4)	7591
17	16.1	3.9	3.7	chr1	6602163	6602214	(242354208)	+	(GCGGC)n	Simple_repeat	1	54	(0)	8522
19	22.2	6.9	3.7	chr1	7704012	7704112	(241252310)	+	(GCCTCCG)n	Simple_repeat	1	108	(0)	10190
12	17.0	2.9	2.8	chr1	7704248	7704282	(241252140)	+	(GGCGG)n	Simple_repeat	1	36	(0)	10191
13	25.2	0.0	2.3	chr1	9687551	9687594	(239268828)	+	G-rich	Low_complexity	1	44	(0)	14179
209	20.2	15.2	3.5	chr1	15435702	15435788	(233520634)	C	MIR3	SINE/MIR	(75)	133	35	25243
270	31.7	9.6	0.0	chr1	16707141	16707263	(232249159)	+	MIRb	SINE/MIR	69	204	(64)	27981
24	24.7	1.0	5.9	chr1	16707783	16707883	(232248539)	+	(GCCCC)n	Simple_repeat	1	102	(0)	27982
2458	6.7	1.6	0.0	chr1	16708314	16708613	(232247809)	C	AluSx3	SINE/Alu	(6)	305	1	27983
25	17.0	3.8	4.8	chr1	21345380	21345459	(227610963)	+	(GCTCCCG)n	Simple_repeat	1	83	(0)	37717
2168	13.3	0.0	0.7	chr1	22743464	22743772	(226212650)	C	AluSz6	SINE/Alu	(5)	307	1	40830
533	24.1	0.6	12.9	chr1	22743773	22743835	(226212587)	+	MIRb	SINE/MIR	183	242	(26)	40829
384	20.8	12.2	5.6	chr1	27350194	27350300	(221606122)	+	MIRb	SINE/MIR	119	233	(35)	51563
19	22.0	6.9	4.8	chr1	27604061	27604176	(221352246)	+	(CCTCGC)n	Simple_repeat	1	124	(0)	52104
12	25.3	0.0	2.5	chr1	27604230	27604269	(221352153)	+	G-rich	Low_complexity	1	40	(0)	52105
12	20.7	5.1	0.0	chr1	28553062	28553100	(220403322)	+	(GCCCC)n	Simple_repeat	1	41	(0)	54505
784	26.6	0.9	4.2	chr1	28811717	28811955	(220144467)	C	MIRb	SINE/MIR	(1)	267	37	55207
19	23.4	1.9	8.3	chr1	28812179	28812284	(220144138)	+	G-rich	Low_complexity	1	108	(0)	55208
13	8.9	0.0	3.9	chr1	28914599	28914624	(220041798)	+	(TCGC)n	Simple_repeat	1	26	(0)	55498
16	32.2	1.2	2.5	chr1	28914778	28914857	(220041565)	+	(GGC)n	Simple_repeat	1	81	(0)	55499
424	26.6	2.6	0.9	chr1	32291676	32291811	(216664611)	+	MIR3	SINE/MIR	37	170	(38)	62538
15	11.7	0.0	0.0	chr1	32292241	32292268	(216664154)	+	(GGGCC)n	Simple_repeat	1	28	(0)	62539
771	21.9	7.7	2.3	chr1	32500104	32500323	(216456099)	+	L1MB5	LINE/L1	5928	6160	(14)	62986
29	2.9	2.8	0.0	chr1	32500418	32500453	(216455969)	+	(GGGCGAGA)n	Simple_repeat	1	37	(0)	62987
15	0.0	0.0	0.0	chr1	32500491	32500509	(216455913)	+	(GGC)n	Simple_repeat	1	19	(0)	62988
14	15.6	2.1	6.1	chr1	32500510	32500535	(216455887)	+	G-rich	Low_complexity	4	49	(0)	62989
12	24.8	0.0	0.0	chr1	32500698	32500731	(216455691)	+	(CCGG)n	Simple_repeat	1	34	(0)	62990
931	25.8	4.5	3.9	chr1	32500964	32501270	(216455152)	C	L1MC4	LINE/L1	(494)	7548	7240	62991
13	10.5	6.5	0.0	chr1	32539961	32539991	(216416431)	+	G-rich	Low_complexity	1	33	(0)	63101
14	27.3	0.0	3.6	chr1	33181241	33181328	(215775094)	+	G-rich	Low_complexity	1	84	(0)	64626
2205	10.7	0.3	0.0	chr1	37415189	37415497	(211540925)	+	AluSz	SINE/Alu	1	310	(2)	72675
15	6.1	8.6	0.0	chr1	37415498	37415518	(211540904)	+	(AAGCAC)n	Simple_repeat	2	25	(0)	72676
14	16.4	2.9	0.0	chr1	37946923	37946956	(211009466)	+	(CCTGC)n	Simple_repeat	1	35	(0)	73787
1862	17.5	6.1	6.3	chr1	38293895	38294059	(210662363)	C	MLT1A1	LTR/ERVL-MaLR	(12)	396	243	74456
5371	9.9	1.8	0.6	chr1	38294060	38294848	(210661574)	C	L1MA2	LINE/L1	(0)	6304	5507	74457
14	12.8	0.0	7.5	chr1	39491528	39491567	(209464855)	+	(CGGCCC)n	Simple_repeat	1	40	(0)	76793
15	16.9	0.0	0.0	chr1	39491773	39491805	(209464617)	+	(AGCGTC)n	Simple_repeat	1	33	(0)	76794
13	11.6	0.0	6.2	chr1	39639687	39639718	(209316704)	+	(CCCGG)n	Simple_repeat	1	32	(0)	77114
21	11.0	0.0	2.4	chr1	39788577	39788626	(209167796)	+	(CGGCGGG)n	Simple_repeat	1	48	(0)	77402
20	29.3	0.0	2.6	chr1	39788923	39789000	(209167422)	+	G-rich	Low_complexity	1	78	(0)	77403
13	20.1	2.0	5.8	chr1	39789020	39789070	(209167352)	+	G-rich	Low_complexity	1	52	(0)	77403
575	26.7	12.8	3.0	chr1	40315775	40316006	(208640416)	C	MIRb	SINE/MIR	(7)	261	4	78567
468	29.6	4.3	2.5	chr1	40476821	40477024	(208479398)	+	L2a	LINE/L2	3201	3408	(18)	78878
37	2.6	0.0	0.0	chr1	40477027	40477065	(208479357)	+	(TGAA)n	Simple_repeat	1	39	(0)	78889
14	23.5	3.1	4.5	chr1	43453522	43453587	(205502835)	+	(CCCGG)n	Simple_repeat	1	65	(0)	84326
38	0.0	2.6	0.0	chr1	43453835	43453873	(205502549)	+	(GGCGGCG)n	Simple_repeat	1	40	(0)	84327
14190	12.6	1.6	2.0	chr1	49113551	49115137	(199841285)	C	Tigger1	DNA/TcMar-Tigger	(829)	1589	1	94611
28	21.8	3.0	7.2	chr1	50968529	50968662	(197987760)	+	G-rich	Low_complexity	1	138	(0)	97721
4747	22.8	5.9	3.9	chr1	53623175	53624537	(195331885)	+	L1M5	LINE/L1	3750	5157	(989)	103436
287	30.3	5.7	0.0	chr1	54541903	54542001	(194414421)	+	L2b	LINE/L2	3267	3371	(4)	105333
706	33.3	6.9	4.7	chr1	55477331	55477781	(193478641)	+	L2b	LINE/L2	2911	3372	(3)	107168
192	35.5	8.6	4.5	chr1	55689800	55690023	(193266399)	C	L2b	LINE/L2	(3)	3372	3139	107562
208	27.9	4.6	13.3	chr1	55690001	55690120	(193266302)	+	MIRc	SINE/MIR	146	254	(14)	107563
315	38.8	2.3	1.4	chr1	55690147	55690363	(193266059)	C	MIRb	SINE/MIR	(46)	222	4	107564
641	28.2	8.4	8.9	chr1	55795084	55795795	(193160627)	+	L1MB3	LINE/L1	7	825	(6795)	107712
13	25.8	2.2	0.0	chr1	64744885	64744930	(184211492)	+	G-rich	Low_complexity	1	47	(0)	124430
13	9.8	0.0	0.0	chr1	65002691	65002712	(183953710)	+	(CGG)n	Simple_repeat	1	22	(0)	124874
19	0.0	0.0	0.0	chr1	65003014	65003034	(183953388)	+	(T)n	Simple_repeat	1	21	(0)	124875
21905	11.2	1.4	1.2	chr1	65860035	65865838	(183090584)	C	L1PA8	LINE/L1	(7)	6480	6	126383
18	22.1	2.1	0.0	chr1	67833185	67833232	(181123190)	+	(CTTC)n	Simple_repeat	1	49	(0)	129656
16	24.3	3.3	1.6	chr1	67833273	67833332	(181123090)	+	(CGCCG)n	Simple_repeat	1	62	(0)	129657
11	13.4	5.7	2.7	chr1	67833344	67833378	(181123044)	+	(CCGCCG)n	Simple_repeat	1	37	(0)	129658
19	6.8	3.2	0.0	chr1	67833416	67833446	(181122976)	+	(CCT)n	Simple_repeat	1	32	(0)	129659
11686	18.6	2.3	2.3	chr1	75373127	75375824	(173580598)	+	L1PA17	LINE/L1	4	2730	(4205)	139866
400	19.1	6.0	1.8	chr1	77358091	77358202	(171598220)	C	L1ME4a	LINE/L1	(50)	6074	5958	142748
264	27.5	18.7	0.0	chr1	77358294	77358402	(171598020)	+	MIRc	SINE/MIR	95	228	(40)	142749
1406	15.7	0.0	0.0	chr1	80899849	80900064	(168056358)	+	AluSx	SINE/Alu	97	312	(0)	147738
18	7.5	0.0	0.0	chr1	84893245	84893272	(164063150)	+	(GCCCC)n	Simple_repeat	1	28	(0)	153270
17	11.3	0.0	0.0	chr1	85201664	85201692	(163754730)	+	(GCG)n	Simple_repeat	1	29	(0)	153785
16	12.8	9.4	1.7	chr1	85201785	85201837	(163754585)	+	G-rich	Low_complexity	1	58	(0)	153786
1926	14.9	13.6	0.3	chr1	85334422	85334792	(163621630)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	154016
10439	17.6	5.2	6.9	chr1	85334793	85335675	(163620747)	+	L1M2	LINE/L1	2354	3197	(3648)	154014
333	34.2	4.8	1.2	chr1	87397052	87397213	(161559209)	C	L2b	LINE/L2	(198)	3189	3021	156990
397	30.7	4.5	1.3	chr1	88703405	88703556	(160252866)	C	MIRb	SINE/MIR	(89)	179	23	158846
2191	8.2	5.1	0.0	chr1	88755917	88756195	(160200227)	C	AluSc	SINE/Alu	(15)	294	1	158930
703	33.5	9.8	2.1	chr1	88756212	88756598	(160199824)	C	L3	LINE/CR1	(47)	4052	3633	158931
4360	23.0	3.2	3.2	chr1	89418613	89420018	(159536404)	C	L1M3	LINE/L1	(813)	5327	3922	159830
12	27.8	3.9	0.0	chr1	93448023	93448074	(155508348)	+	(CCCCCTC)n	Simple_repeat	1	54	(0)	166315
581	24.5	12.1	1.4	chr1	94236910	94237116	(154719306)	+	MIR	SINE/MIR	10	241	(21)	167492
19	9.8	0.0	2.9	chr1	94418422	94418456	(154537966)	+	(GCC)n	Simple_repeat	1	35	(0)	167758
11	17.3	0.0	5.6	chr1	94419001	94419036	(154537386)	+	G-rich	Low_complexity	1	36	(0)	167759
11	18.1	2.4	4.8	chr1	94927015	94927055	(154029367)	+	(GGCGCG)n	Simple_repeat	1	42	(0)	168516
13	23.7	1.9	3.7	chr1	94927275	94927327	(154029095)	+	(CCCGCC)n	Simple_repeat	1	54	(0)	168517
223	36.4	0.8	2.5	chr1	99642250	99642370	(149314052)	+	L2c	LINE/L2	3231	3349	(38)	175121
10031	21.1	4.8	2.1	chr1	103828566	103831063	(145125359)	C	L1M4c	LINE/L1	(3793)	2583	15	180992
2085	26.9	0.4	3.0	chr1	106914754	106915289	(142041133)	+	L1PA13	LINE/L1	221	742	(6043)	184654
24	12.2	3.4	4.9	chr1	107964917	107964975	(140991447)	+	(GCC)n	Simple_repeat	1	61	(0)	186143
20852	11.7	0.9	2.1	chr1	108518413	108521195	(140435227)	C	L1PA8	LINE/L1	(3669)	2792	8	186858
598	27.4	6.4	0.6	chr1	108760559	108760734	(140195688)	C	MIR	SINE/MIR	(4)	258	72	187278
13	18.3	4.3	4.1	chr1	109397924	109397970	(139558452)	+	(CCGC)n	Simple_repeat	1	49	(0)	188516
17	22.1	0.0	5.2	chr1	110210799	110210856	(138745566)	+	(CCGCC)n	Simple_repeat	1	58	(0)	189741
387	29.1	5.3	4.3	chr1	110338041	110338320	(138618102)	+	Charlie16a	DNA/hAT-Charlie	44	326	(16)	189971
354	28.9	7.7	6.2	chr1	111739965	111740156	(137216266)	C	L2a	LINE/L2	(26)	3400	3206	191993
1137	29.1	8.8	7.0	chr1	113729576	113730232	(135226190)	+	MER21C	LTR/ERVL	127	796	(142)	195414
2044	11.6	2.7	2.0	chr1	114637521	114637813	(134318609)	C	AluSz6	SINE/Alu	(16)	296	2	197003
1839	24.2	5.9	6.3	chr1	114637814	114638447	(134317975)	+	L1MEc	LINE/L1	4701	5344	(975)	196989
312	26.0	18.0	6.4	chr1	116290146	116290301	(132666121)	C	MamSINE1	SINE/tRNA-RTE	(69)	221	44	199465
622	29.5	11.0	1.6	chr1	117100624	117100943	(131855479)	+	L2c	LINE/L2	3034	3387	(0)	200752
14	4.7	0.0	4.2	chr1	117367469	117367492	(131588930)	+	(GCG)n	Simple_repeat	1	24	(0)	201207
959	28.1	16.7	2.6	chr1	117463357	117463508	(131492914)	+	HAL1b	LINE/L1	449	596	(1825)	201353
2130	10.7	4.6	0.0	chr1	118015003	118015291	(130941131)	+	AluSq2	SINE/Alu	1	303	(10)	202161
505	25.7	12.3	7.8	chr1	118015292	118015312	(130941110)	+	MIRb	SINE/MIR	226	245	(23)	202160
4005	27.6	11.7	1.8	chr1	118356493	118361441	(130594981)	+	L1ME2	LINE/L1	722	6164	(68)	202658
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
1273	10.3	0.0	0.6	chr1	144412576	144412741	(104543681)	+	U1	snRNA	1	165	(0)	209362
1296	24.4	10.7	12.4	chr1	145950665	145950953	(103005469)	C	LTR16B	LTR/ERVL	(198)	265	2	211810
181	30.4	0.0	0.0	chr1	145950971	145951016	(103005406)	C	MIR	SINE/MIR	(18)	244	199	211813
477	30.3	0.7	2.1	chr1	150548577	150548721	(98407701)	C	MIRb	SINE/MIR	(103)	165	23	219329
17	14.7	0.0	4.8	chr1	150548970	150549011	(98407411)	+	(GCCGC)n	Simple_repeat	1	42	(0)	219330
12	20.4	2.4	2.4	chr1	150549510	150549550	(98406872)	+	(CCCCCGG)n	Simple_repeat	1	42	(0)	219331
919	21.1	0.0	2.2	chr1	154071115	154071281	(94885141)	C	AluJb	SINE/Alu	(30)	282	118	225376
4464	10.5	2.2	3.2	chr1	154071299	154071627	(94884795)	C	L1PB1	LINE/L1	(0)	6151	5830	225378
549	32.4	11.5	2.3	chr1	156202964	156203522	(92752900)	+	L2a	LINE/L2	2799	3418	(8)	229691
215	27.3	3.0	1.5	chr1	156752099	156752165	(92204257)	C	L2c	LINE/L2	(1)	3374	3307	230675
297	32.0	14.8	0.0	chr1	159779704	159779853	(89176569)	+	MIR	SINE/MIR	84	259	(3)	234739
313	28.2	15.4	2.3	chr1	159779867	159780040	(89176382)	+	L3	LINE/CR1	3506	3706	(393)	234740
869	28.9	1.2	6.5	chr1	161046495	161046757	(87909665)	+	MIRb	SINE/MIR	5	253	(15)	236761
18	25.5	2.3	5.6	chr1	161440260	161440347	(87516075)	+	(CCCG)n	Simple_repeat	1	90	(0)	237537
662	1.3	0.0	0.0	chr1	161440822	161440896	(87515526)	C	tRNA-Asp-GAY	tRNA	(0)	75	1	237538
633	1.4	0.0	0.0	chr1	161523846	161523917	(87432505)	C	tRNA-Gly-GGY	tRNA	(2)	72	1	237663
12	20.2	2.9	0.0	chr1	161524527	161524560	(87431862)	+	(AGCTG)n	Simple_repeat	1	35	(0)	237664
345	27.8	2.7	0.0	chr1	161824179	161824286	(87132136)	+	L2a	LINE/L2	2980	3090	(336)	238186
235	10.8	0.0	0.0	chr1	161824314	161824350	(87132072)	+	L1PREC2	LINE/L1	6124	6160	(0)	238187
16	9.8	0.0	0.0	chr1	161824381	161824402	(87132020)	+	(A)n	Simple_repeat	1	22	(0)	238188
733	21.3	17.6	2.0	chr1	161824403	161824656	(87131766)	+	L2a	LINE/L2	3125	3426	(0)	238186
796	24.5	8.5	10.5	chr1	161952240	161952650	(87003772)	+	L2a	LINE/L2	3025	3426	(0)	238376
5437	24.5	9.3	2.4	chr1	163913896	163916835	(85039587)	C	L1M2c	LINE/L1	(2715)	4847	2023	241425
478	24.2	15.8	1.8	chr1	166198761	166198983	(82757439)	C	MLT1L	LTR/ERVL-MaLR	(1)	609	350	244964
19	23.1	2.6	5.0	chr1	166975542	166975619	(81980803)	+	(CCG)n	Simple_repeat	1	80	(0)	245959
16	11.6	0.0	0.0	chr1	167926611	167926638	(81029784)	+	(CTG)n	Simple_repeat	1	28	(0)	247552
431	13.5	0.0	0.0	chr1	167926639	167926712	(81029710)	+	MER20	DNA/hAT-Charlie	93	166	(53)	247553
274	32.0	14.9	5.5	chr1	167926762	167927052	(81029370)	+	L2c	LINE/L2	3007	3329	(58)	247554
28372	2.1	0.1	0.0	chr1	168348863	168354879	(80601543)	C	L1PA2	LINE/L1	(0)	6155	131	248249
1688	4.9	0.0	3.5	chr1	169550129	169550359	(79406063)	C	L1PA5	LINE/L1	(0)	6154	5932	250097
12939	13.3	5.7	2.3	chr1	171597472	171598870	(77357552)	+	Tigger1	DNA/TcMar-Tigger	1	1472	(946)	252998
12	4.7	0.0	7.7	chr1	171741943	171741968	(77214454)	+	(CGGG)n	Simple_repeat	1	26	(0)	253260
11555	10.1	1.8	4.5	chr1	173565873	173568125	(75388297)	C	L1MA2	LINE/L1	(2190)	5375	3176	255771
400	29.8	17.6	2.2	chr1	174390575	174390886	(74565536)	C	L2a	LINE/L2	(620)	2799	2430	257142
11	21.1	2.5	2.4	chr1	174390933	174390972	(74565450)	+	(AGAGACA)n	Simple_repeat	1	41	(0)	257143
247	31.9	3.7	9.8	chr1	179030747	179030904	(69925518)	C	L2c	LINE/L2	(5)	3421	3253	264030
546	21.8	18.3	4.5	chr1	182771388	182771565	(66184857)	+	MER63A	DNA/hAT-Blackjack	3	210	(0)	270033
352	33.7	6.5	4.7	chr1	186679921	186680132	(62276290)	C	MIRb	SINE/MIR	(51)	217	2	275943
13	14.3	4.8	4.5	chr1	186680276	186680317	(62276105)	+	(GGCGC)n	Simple_repeat	1	44	(0)	275944
902	29.2	12.6	2.6	chr1	187374670	187375389	(61581033)	+	L2a	LINE/L2	2577	3388	(38)	276926
288	30.0	8.7	4.7	chr1	188907328	188907670	(60048752)	C	L1MEc	LINE/L1	(6025)	375	18	278902
1483	23.4	1.7	3.0	chr1	191804290	191804655	(57151767)	C	L1M2	LINE/L1	(6485)	364	4	282587
479	37.5	5.8	5.8	chr1	200599253	200599573	(48356849)	+	L2c	LINE/L2	2910	3239	(148)	294608
450	16.5	0.0	0.0	chr1	200599574	200599652	(48356770)	+	MADE2	DNA/TcMar-Mariner	1	79	(1)	294609
479	37.5	5.8	5.8	chr1	200599653	200599799	(48356623)	+	L2c	LINE/L2	3240	3378	(9)	294608
455	13.8	6.0	5.0	chr1	202624116	202625415	(46331007)	+	(GT)n	Simple_repeat	1	1378	(0)	298201
1011	15.7	6.4	2.5	chr1	205972783	205975447	(42980975)	+	(CA)n	Simple_repeat	1	2768	(0)	304363
412	21.6	3.0	2.9	chr1	206923601	206924793	(42031629)	+	(GT)n	Simple_repeat	1	1229	(0)	305929
711	24.6	12.6	1.4	chr1	210481804	210482102	(38474320)	C	L2a	LINE/L2	(260)	3166	2829	311226
23	11.5	0.0	0.0	chr1	212254951	212254989	(36701433)	+	(CCTC)n	Simple_repeat	1	39	(0)	314229
16	17.1	4.9	2.3	chr1	212558963	212559003	(36397419)	+	(CG)n	Simple_repeat	1	43	(0)	314754
355	27.6	10.1	6.4	chr1	212644786	212644955	(36311467)	+	MIR3	SINE/MIR	35	198	(10)	314903
399	27.5	13.3	9.4	chr1	212645228	212645653	(36310769)	+	L2c	LINE/L2	2942	3386	(1)	314904
18	24.1	7.1	2.8	chr1	215097331	215097429	(33858993)	+	(CTTC)n	Simple_repeat	1	106	(0)	318649
540	27.8	11.1	1.1	chr1	217111776	217112259	(31844163)	+	MLT1F1	LTR/ERVL-MaLR	1	564	(5)	321262
1025	25.6	10.8	11.4	chr1	218319364	218319621	(30636801)	C	L1MC5a	LINE/L1	(1068)	1709	1444	323057
306	30.0	5.2	0.9	chr1	218319709	218319819	(30636603)	C	MIRc	SINE/MIR	(20)	248	133	323059
16	21.2	2.3	0.0	chr1	218620456	218620499	(30335923)	+	(ATTCA)n	Simple_repeat	1	45	(0)	323543
576	32.7	6.7	0.9	chr1	218620616	218620840	(30335582)	C	MamRTE1	LINE/RTE-BovB	(2547)	1265	1027	323544
403	29.5	5.7	5.7	chr1	220689911	220690158	(28266264)	C	L1M5	LINE/L1	(504)	5620	5373	326594
11	20.1	2.9	0.0	chr1	220690463	220690496	(28265926)	+	G-rich	Low_complexity	1	35	(0)	326595
19	3.7	0.0	3.3	chr1	223845786	223845815	(25110607)	+	(GGC)n	Simple_repeat	1	30	(0)	331313
17	19.6	6.7	3.8	chr1	223845956	223846030	(25110392)	+	(CCGCG)n	Simple_repeat	1	80	(0)	331314
401	32.3	9.5	0.0	chr1	224107403	224107535	(24848887)	C	7SK	RNA	(183)	148	2	331804
260	24.4	1.2	13.7	chr1	224184055	224184149	(24772273)	C	MIRc	SINE/MIR	(62)	206	124	331976
13	14.6	8.5	2.0	chr1	224357171	224357217	(24599205)	+	(CTGCC)n	Simple_repeat	1	51	(0)	332414
13	19.2	1.6	9.2	chr1	224929879	224929942	(24026480)	+	(GGCG)n	Simple_repeat	1	65	(0)	333381
12116	12.1	1.9	0.7	chr1	225209735	225211873	(23744549)	+	L1P3	LINE/L1	37	2197	(4302)	333682
303	18.6	15.7	0.0	chr1	225663321	225663390	(23293032)	C	MLT1K	LTR/ERVL-MaLR	(114)	481	399	334329
372	27.9	3.7	0.0	chr1	225663500	225663603	(23292819)	C	MLT1K	LTR/ERVL-MaLR	(343)	252	145	334329
12	18.3	9.6	3.8	chr1	226223763	226223835	(22732587)	+	(GCGCCCT)n	Simple_repeat	1	80	(0)	335480
292	21.4	0.0	0.0	chr1	226248956	226249011	(22707411)	+	MER101	LTR/ERV1	359	414	(60)	335530
19992	12.6	1.3	2.3	chr1	227575019	227579140	(21377282)	C	L1PA13	LINE/L1	(0)	5504	1377	337670
5275	22.8	7.6	2.8	chr1	227579131	227580326	(21376096)	C	L1PA13	LINE/L1	(5527)	1258	1	337670
7587	8.9	5.6	3.9	chr1	227679712	227681200	(21275222)	+	Harlequin-int	LTR/ERV1	1	1422	(5474)	337778
20	16.4	0.0	0.0	chr1	228103264	228103304	(20853118)	+	(GCAACCC)n	Simple_repeat	1	41	(0)	338293
2201	8.3	1.4	0.0	chr1	228103519	228103807	(20852615)	+	AluSz	SINE/Alu	1	293	(19)	338294
18	10.0	0.0	2.9	chr1	228735416	228735449	(20220973)	+	(CCCG)n	Simple_repeat	1	34	(0)	339121
3235	13.0	4.1	0.2	chr1	229209704	229210196	(19746226)	C	LTR64	LTR/ERV1	(14)	514	2	339857
269	25.5	5.8	5.8	chr1	229210259	229210362	(19746060)	C	MIR3	SINE/MIR	(19)	189	86	339858
227	32.9	7.5	7.2	chr1	229277514	229277866	(19678556)	+	L2	LINE/L2	635	988	(2431)	339999
2597	14.3	7.8	0.2	chr1	230141317	230141777	(18814645)	C	L1MB2	LINE/L1	(12)	6159	5661	341469
410	30.2	12.2	7.5	chr1	230256713	230257367	(18699055)	C	L2a	LINE/L2	(45)	3381	2696	341605
1844	15.0	7.8	0.3	chr1	230257368	230257689	(18698733)	+	Tigger3a	DNA/TcMar-Tigger	1	348	(0)	341606
812	13.3	0.0	0.0	chr1	231683426	231683538	(17272884)	C	AluJb	SINE/Alu	(12)	300	188	343916
68	23.5	0.6	1.8	chr1	231695565	231695731	(17260691)	+	(GT)n	Simple_repeat	1	168	(0)	343934
203	36.9	14.1	0.0	chr1	231696084	231696297	(17260125)	+	L2	LINE/L2	2529	2777	(642)	343935
229	29.5	0.0	0.0	chr1	231696300	231696360	(17260062)	+	MIR	SINE/MIR	183	243	(19)	343933
1962	27.1	14.2	4.5	chr1	234264220	234264537	(14691885)	+	L2a	LINE/L2	1639	2059	(1360)	347597
559	29.3	1.9	4.7	chr1	234781964	234782178	(14174244)	+	MamRep1879	DNA/hAT-Tip100?	8	216	(0)	348428
885	23.4	1.4	1.9	chr1	234782180	234782388	(14174034)	+	MIRb	SINE/MIR	55	262	(6)	348429
246	19.8	4.9	0.9	chr1	235078154	235078768	(13877654)	+	(TG)n	Simple_repeat	1	645	(0)	348979
188	37.0	5.4	4.0	chr1	235093691	235093890	(13862532)	+	L2c	LINE/L2	3180	3382	(5)	349016
1047	20.9	4.8	6.7	chr1	235094173	235094479	(13861943)	C	MLT2D	LTR/ERVL	(0)	414	112	349017
15	4.8	0.0	0.0	chr1	236065014	236065035	(12891387)	+	(CAG)n	Simple_repeat	1	22	(0)	350913
16	3.8	0.0	6.5	chr1	236065203	236065233	(12891189)	+	(AGGGG)n	Simple_repeat	1	31	(0)	350914
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
188	28.6	0.2	0.0	chr1	236149835	236150344	(12806078)	+	(GTGTGT)n	Simple_repeat	1	511	(0)	351098
16	14.3	0.0	6.8	chr1	236281579	236281622	(12674800)	+	(GGCCC)n	Simple_repeat	1	44	(0)	351303
3683	20.6	5.0	1.2	chr1	238565349	238566194	(10390228)	+	MER70-int	LTR/ERVL	224	1191	(3832)	354875
240	28.4	1.1	3.3	chr1	240262573	240262663	(8693759)	C	LTR82A	LTR/ERVL	(33)	839	751	357381
252	31.4	1.9	11.0	chr1	240262681	240262753	(8693669)	C	MER94	DNA/hAT-Blackjack	(27)	107	42	357382
2285	10.6	1.0	0.0	chr1	240262754	240263054	(8693368)	C	AluSx1	SINE/Alu	(4)	308	5	357383
213	23.3	7.7	1.6	chr1	241305922	241305982	(7650440)	C	MIR3	SINE/MIR	(55)	153	89	359095
177	36.5	0.4	0.7	chr1	241306129	241306853	(7649569)	+	(CA)n	Simple_repeat	1	728	(0)	359096
323	36.0	0.0	5.0	chr1	242122989	242123129	(6833293)	+	MER5A	DNA/hAT-Charlie	34	167	(22)	360508
3066	15.9	3.6	6.4	chr1	242123130	242123752	(6832670)	C	MER6A	DNA/TcMar-Tigger	(0)	605	1	360509
13	17.8	5.3	0.0	chr1	242668055	242668092	(6288330)	+	(TGTATA)n	Simple_repeat	1	40	(0)	361332
868	24.2	16.2	2.2	chr1	242668099	242668542	(6287880)	+	MLT1H	LTR/ERVL-MaLR	18	549	(0)	361333
352	27.8	3.1	0.8	chr1	243413583	243413709	(5542713)	+	MER94	DNA/hAT-Blackjack	3	132	(2)	362558
1903	17.2	0.0	0.0	chr1	243774879	243775162	(5181260)	C	AluJb	SINE/Alu	(28)	284	1	363051
980	29.5	9.3	1.1	chr10	7326010	7326444	(126470978)	C	MER20B	DNA/hAT-Charlie	(268)	515	42	380844
25	16.9	1.5	4.5	chr10	8200525	8200590	(125596832)	+	(TTAT)n	Simple_repeat	1	67	(0)	382328
1319	17.3	5.0	7.2	chr10	8629984	8630065	(125167357)	+	MER33	DNA/hAT-Charlie	260	324	(0)	383092
19	17.9	2.6	0.0	chr10	8630426	8630464	(125166958)	+	GA-rich	Low_complexity	1	40	(0)	383094
785	26.0	1.5	7.2	chr10	11553905	11554142	(122243280)	C	MLT1J	LTR/ERVL-MaLR	(51)	461	238	387052
242	18.5	9.7	0.0	chr10	11554226	11554290	(122243132)	+	L1MEg	LINE/L1	256	327	(5757)	387054
1036	26.9	12.1	6.4	chr10	11554262	11554789	(122242633)	+	L1MEg	LINE/L1	438	999	(5416)	387055
304	31.0	5.5	3.5	chr10	11705422	11705596	(122091826)	C	MIR3	SINE/MIR	(4)	204	35	387365
234	28.9	4.5	5.9	chr10	13135387	13135522	(120661900)	+	L2c	LINE/L2	3075	3208	(179)	390167
28	0.0	0.0	0.0	chr10	13161892	13161918	(120635504)	+	(ATTC)n	Simple_repeat	1	27	(0)	390208
183	27.4	1.9	0.0	chr10	13161991	13162041	(120635381)	C	L2a	LINE/L2	(98)	3328	3277	390209
11	18.8	4.3	4.2	chr10	17228157	17228202	(116569220)	+	G-rich	Low_complexity	1	48	(0)	397004
13	26.8	4.7	1.5	chr10	17454109	17454172	(116343250)	+	(GGCGC)n	Simple_repeat	1	67	(0)	397407
21	8.9	2.8	0.0	chr10	17454181	17454216	(116343206)	+	(GCA)n	Simple_repeat	1	37	(0)	397408
30	27.5	3.1	3.0	chr10	17454240	17454368	(116343054)	+	(CGC)n	Simple_repeat	1	133	(0)	397409
29	3.2	0.0	0.0	chr10	32957999	32958030	(100839392)	+	(CCGCCC)n	Simple_repeat	1	32	(0)	422529
19	15.9	2.4	0.0	chr10	43648829	43648870	(90148552)	+	(GCCGGC)n	Simple_repeat	1	43	(0)	433924
506	17.7	14.5	1.6	chr10	43888615	43888740	(89908682)	C	MER91B	DNA/hAT-Tip100	(5)	185	41	434242
250	27.5	14.2	0.0	chr10	43888810	43888918	(89908504)	C	L1ME3G	LINE/L1	(558)	366	240	434240
16	23.5	6.4	2.4	chr10	45672536	45672613	(88124809)	+	(CGCCAG)n	Simple_repeat	1	83	(0)	436407
13	36.1	0.0	2.6	chr10	45672635	45672657	(88124765)	+	(GCCC)n	Simple_repeat	1	76	(0)	436408
14	26.7	0.0	3.8	chr10	45672658	45672710	(88124712)	+	(CGCT)n	Simple_repeat	1	53	(0)	436409
392	28.8	0.0	0.1	chr10	49253614	49254674	(84542748)	+	(TG)n	Simple_repeat	1	1061	(0)	441656
22	34.0	0.0	0.0	chr10	49254814	49254890	(84542532)	+	(TC)n	Simple_repeat	1	77	(0)	441657
378	16.1	0.0	0.0	chr10	68203760	68203815	(65593607)	+	Tigger5b	DNA/TcMar-Tigger	417	472	(0)	468708
297	22.0	6.2	7.1	chr10	68203816	68203847	(65593575)	C	MER47C	DNA/TcMar-Tigger	(0)	76	1	468709
220	30.7	6.8	7.7	chr10	68203901	68204266	(65593156)	+	L2c	LINE/L2	3011	3394	(32)	468710
2905	15.8	5.8	1.1	chr10	68736260	68736828	(65060594)	C	L1MA8	LINE/L1	(48)	6243	5646	470003
13	15.2	0.0	3.2	chr10	68737001	68737039	(65060383)	+	(GCA)n	Simple_repeat	1	37	(0)	470004
2544	26.5	6.4	4.8	chr10	70613033	70613501	(63183921)	C	L1MEd	LINE/L1	(3818)	2328	1838	473813
2054	15.5	0.7	2.0	chr10	72906985	72907280	(60890142)	+	AluJr	SINE/Alu	1	292	(20)	478262
443	28.1	11.2	3.4	chr10	76065696	76065934	(57731488)	+	MLT1H	LTR/ERVL-MaLR	1	260	(289)	484006
495	18.3	5.4	3.7	chr10	77470983	77472174	(56325248)	+	(AC)n	Simple_repeat	1	1230	(0)	485983
13	17.6	2.4	4.7	chr10	87659773	87659814	(46137608)	+	GA-rich	Low_complexity	1	43	(0)	501619
28	0.0	0.0	0.0	chr10	87659882	87659907	(46137515)	+	(GCT)n	Simple_repeat	1	26	(0)	501620
13	0.0	0.0	0.0	chr10	87659908	87659924	(46137498)	+	(CGC)n	Simple_repeat	1	17	(0)	501621
16	27.6	0.0	1.8	chr10	88880176	88880230	(44917192)	+	(CAGAGG)n	Simple_repeat	1	55	(0)	503504
19	6.7	0.0	3.0	chr10	89414685	89414717	(44382705)	+	(GCACGC)n	Simple_repeat	1	33	(0)	504339
27	16.1	4.1	2.6	chr10	91410234	91410306	(42387116)	+	G-rich	Low_complexity	1	76	(0)	507281
18	25.9	1.3	5.2	chr10	91410354	91410429	(42386993)	+	(CGC)n	Simple_repeat	1	77	(0)	507282
16	17.8	2.1	4.1	chr10	92689765	92689812	(41107610)	+	G-rich	Low_complexity	1	49	(0)	509676
13	24.7	5.7	2.7	chr10	92689910	92689979	(41107443)	+	(GGAGCGC)n	Simple_repeat	1	74	(0)	509677
12	21.0	0.0	7.8	chr10	92690390	92690440	(41106982)	+	G-rich	Low_complexity	1	51	(0)	509678
16	26.4	2.8	2.7	chr10	95291011	95291081	(38506341)	+	G-rich	Low_complexity	1	73	(0)	514030
3273	12.8	6.1	6.1	chr10	99777672	99778029	(34019393)	C	L1MCa	LINE/L1	(4407)	2101	1730	522095
1652	13.0	15.7	0.0	chr10	99778030	99778314	(34019108)	+	MER1B	DNA/hAT-Charlie	1	338	(1)	522097
8663	19.3	5.2	1.9	chr10	113207974	113210481	(20586941)	+	L1M4	LINE/L1	1718	4380	(2258)	543918
556	25.7	1.7	4.6	chr10	113999730	113999966	(19797456)	C	L3	LINE/CR1	(1848)	2251	2022	545223
210	29.0	5.1	3.1	chr10	114000001	114000096	(19797326)	C	L3	LINE/CR1	(2109)	1990	1893	545224
34	10.4	4.8	0.0	chr10	114043898	114043960	(19753462)	+	(GCAGCG)n	Simple_repeat	1	66	(0)	545303
30	23.6	0.0	1.3	chr10	114043961	114043974	(19753448)	+	(GCG)n	Simple_repeat	1	77	(0)	545304
12	29.0	3.0	2.9	chr10	114044187	114044252	(19753170)	+	(GCC)n	Simple_repeat	1	68	(0)	545305
29	25.2	0.9	5.4	chr10	121598376	121598485	(12198937)	+	(GCC)n	Simple_repeat	1	111	(0)	557380
13	14.0	4.7	4.4	chr10	122374765	122374807	(11422615)	+	(GCCGCG)n	Simple_repeat	1	45	(0)	558776
211	20.3	7.5	0.0	chr10	122375444	122375517	(11421905)	C	MIRc	SINE/MIR	(159)	109	30	558777
1836	10.1	12.4	0.0	chr10	124095825	124096092	(9701330)	+	AluSz	SINE/Alu	1	306	(6)	561349
454	23.4	3.1	0.0	chr10	124096152	124096245	(9701177)	+	MIR	SINE/MIR	30	126	(136)	561350
563	35.0	0.9	0.2	chr10	124153530	124155709	(9641713)	+	(CA)n	Simple_repeat	1	2199	(0)	561446
16	15.4	2.8	0.0	chr10	124461792	124461827	(9335595)	+	(GCGCCG)n	Simple_repeat	1	37	(0)	561977
19	10.4	4.7	2.2	chr10	124462052	124462094	(9335328)	+	G-rich	Low_complexity	1	45	(0)	561978
507	25.8	1.1	9.0	chr10	124462197	124462312	(9335110)	+	MER33	DNA/hAT-Charlie	1	118	(206)	561979
14	16.6	2.2	6.4	chr10	124744221	124744266	(9053156)	+	(GCC)n	Simple_repeat	1	47	(0)	562380
22	13.7	6.2	5.8	chr10	124744309	124744315	(9053107)	+	(GGCGGCA)n	Simple_repeat	1	18	(68)	562381
25	2.3	1.9	9.3	chr10	124744316	124744368	(9053054)	+	(GGC)n	Simple_repeat	1	54	(0)	562382
17	13.8	5.0	0.0	chr10	124791785	124791824	(9005598)	+	(ACCGCC)n	Simple_repeat	1	42	(0)	562470
2057	9.7	6.4	4.8	chr10	132820442	132825341	(972081)	+	(TGCTGTG)n	Simple_repeat	1	5212	(0)	571970
2588	20.4	3.1	2.2	chr11	481262	481830	(134604792)	C	L1M4	LINE/L1	(1402)	4744	4174	573446
2377	9.2	1.0	1.9	chr11	481831	482145	(134604477)	C	AluSp	SINE/Alu	(1)	312	1	573447
2400	5.8	0.3	0.3	chr11	518188	518481	(134568141)	C	AluY	SINE/Alu	(17)	294	1	573498
936	9.4	3.0	0.0	chr11	518496	518622	(134568000)	C	AluSx3	SINE/Alu	(180)	131	1	573499
2543	6.6	1.9	0.0	chr11	912563	912867	(134173755)	+	AluY	SINE/Alu	1	311	(0)	574082
13	28.7	0.0	0.0	chr11	1017643	1017684	(134068938)	+	(TGG)n	Simple_repeat	1	42	(0)	574242
402	25.4	2.8	0.8	chr11	1147387	1148549	(133938073)	+	(TG)n	Simple_repeat	1	1196	(0)	574370
11	26.9	3.3	3.2	chr11	1547181	1547241	(133539381)	+	(CGCGCCC)n	Simple_repeat	1	63	(0)	574728
42	2.3	2.3	0.0	chr11	1939826	1939869	(133146753)	+	(CA)n	Simple_repeat	1	45	(0)	575261
270	11.1	0.0	0.0	chr11	1939875	1939910	(133146712)	+	AluJo	SINE/Alu	247	282	(30)	575262
301	20.4	0.0	0.0	chr11	1939926	1939974	(133146648)	+	AluJo	SINE/Alu	237	285	(27)	575263
1455	23.7	1.5	10.5	chr11	4966092	4966615	(130120007)	C	MER31A	LTR/ERV1	(9)	476	1	579449
7797	24.2	1.5	2.3	chr11	5929745	5933737	(129152885)	+	HERV-Fc2-int	LTR/ERV1	820	4696	(2554)	580645
3012	13.3	0.4	0.0	chr11	7321523	7321989	(127764633)	C	MER66C	LTR/ERV1	(14)	541	73	582530
13	17.0	3.0	0.0	chr11	8019684	8019716	(127066906)	+	G-rich	Low_complexity	1	34	(0)	583390
21	19.9	0.0	0.0	chr11	9438235	9438280	(125648342)	+	(ATG)n	Simple_repeat	1	46	(0)	585802
2419	10.2	0.0	0.7	chr11	9438345	9438638	(125647984)	+	AluSg4	SINE/Alu	1	292	(18)	585803
1226	33.2	11.4	8.3	chr11	11654811	11654965	(123431657)	C	L2	LINE/L2	(829)	2590	2421	589537
397	20.7	0.0	0.0	chr11	11654966	11655047	(123431575)	+	L1PA16	LINE/L1	5939	6020	(146)	589539
1226	33.2	11.4	8.3	chr11	11655048	11656173	(123430449)	C	L2	LINE/L2	(829)	2420	1181	589537
18	23.7	4.9	1.6	chr11	12377862	12377922	(122708700)	+	(CG)n	Simple_repeat	1	64	(0)	590688
13	33.7	1.4	1.4	chr11	13277699	13277770	(121808852)	+	G-rich	Low_complexity	1	73	(0)	592125
17	20.8	0.0	2.2	chr11	13277863	13277908	(121808714)	+	G-rich	Low_complexity	1	46	(0)	592126
833	35.2	5.8	7.3	chr11	14736365	14736870	(120349752)	+	L3	LINE/CR1	2349	2846	(1253)	594428
14	24.0	0.0	0.0	chr11	14891684	14891722	(120194900)	+	(GGAGCA)n	Simple_repeat	1	39	(0)	594637
12	20.8	6.8	0.0	chr11	14891919	14891962	(120194660)	+	(GGCCC)n	Simple_repeat	1	47	(0)	594638
182	37.0	2.4	0.0	chr11	16977542	16977622	(118109000)	+	L2b	LINE/L2	3274	3356	(19)	597813
3022	27.7	8.8	1.9	chr11	17754920	17756101	(117330521)	C	L2a	LINE/L2	(112)	3314	2039	599268
403	32.7	7.0	6.4	chr11	17756113	17756439	(117330183)	+	L2c	LINE/L2	3054	3382	(5)	599269
266	25.7	5.0	0.9	chr11	20888507	20888620	(114198002)	+	L1MEd	LINE/L1	1165	1283	(5820)	604632
697	26.4	10.8	7.5	chr11	20888660	20889125	(114197497)	C	MLT1H	LTR/ERVL-MaLR	(37)	512	30	604636
564	23.6	4.7	13.1	chr11	22185883	22186099	(112900523)	+	L1ME1	LINE/L1	5944	6142	(37)	606570
1877	20.3	5.8	2.9	chr11	22186100	22186550	(112900072)	+	MSTA1	LTR/ERVL-MaLR	1	465	(0)	606571
628	35.6	3.7	4.2	chr11	27387203	27387718	(107698904)	C	L2a	LINE/L2	(46)	3380	2871	613863
286	24.8	9.5	13.6	chr11	34358636	34358789	(100727833)	+	Charlie4z	DNA/hAT-Charlie	1	147	(20)	625130
24350	9.9	1.4	1.1	chr11	34389014	34395614	(100691008)	C	L1PB1	LINE/L1	(1)	6866	255	625195
741	26.3	4.3	6.5	chr11	37825737	37825996	(97260626)	+	LTR102_Mam	LTR/ERVL	557	810	(41)	630378
2802	28.2	8.4	3.5	chr11	37826014	37827296	(97259326)	C	L1MDa	LINE/L1	(5228)	1405	3	630380
15	19.9	3.5	5.1	chr11	43942623	43942679	(91143943)	+	(GGC)n	Simple_repeat	1	59	(0)	639240
12	21.9	3.9	3.8	chr11	43943176	43943226	(91143396)	+	(GCA)n	Simple_repeat	1	53	(0)	639241
13	4.1	8.0	0.0	chr11	45922400	45922424	(89164198)	+	(GGGCA)n	Simple_repeat	1	27	(0)	643027
18	10.4	3.1	0.0	chr11	45922916	45922947	(89163675)	+	(GCT)n	Simple_repeat	1	33	(0)	643028
13	5.2	0.0	0.0	chr11	45923138	45923157	(89163465)	+	(CCG)n	Simple_repeat	1	20	(0)	643029
216	31.0	6.3	2.2	chr11	45923240	45923392	(89163230)	+	MIR3	SINE/MIR	35	195	(35)	643030
19	14.4	5.3	3.3	chr11	46918068	46918124	(88168498)	+	(CCCGGA)n	Simple_repeat	1	60	(0)	644902
13	21.3	4.5	5.7	chr11	46918203	46918269	(88168353)	+	G-rich	Low_complexity	1	70	(0)	644903
313	29.8	1.9	0.0	chr11	57225142	57225245	(77861377)	C	MIR3	SINE/MIR	(48)	160	55	653283
16	15.9	0.0	0.0	chr11	57460374	57460401	(77626221)	+	G-rich	Low_complexity	1	28	(0)	653750
12	9.7	0.0	0.0	chr11	57460556	57460577	(77626045)	+	(ACGG)n	Simple_repeat	1	22	(0)	653751
19	22.2	0.0	0.0	chr11	57460625	57460671	(77625951)	+	(CGCCC)n	Simple_repeat	1	47	(0)	653752
261	31.6	4.9	1.3	chr11	57568015	57568171	(77518451)	C	MamRep1879	DNA/hAT-Tip100?	(49)	167	5	654006
17	24.7	0.0	4.2	chr11	57792416	57792463	(77294159)	+	(TG)n	Simple_repeat	1	48	(0)	654475
1447	17.8	10.3	0.8	chr11	62644367	62644630	(72441992)	+	AluJo	SINE/Alu	2	293	(19)	662466
20	8.1	2.3	4.5	chr11	63671527	63671569	(71415053)	+	(CGAGG)n	Simple_repeat	1	44	(0)	664137
331	34.7	3.4	3.4	chr11	64225936	64226114	(70860508)	C	MIR3	SINE/MIR	(1)	207	29	665220
14	32.0	0.0	1.7	chr11	64844195	64844254	(70242368)	+	G-rich	Low_complexity	1	60	(0)	666322
13	12.1	3.6	0.0	chr11	65334301	65334328	(69752294)	+	(CCGTC)n	Simple_repeat	1	29	(0)	667347
13	22.1	0.0	6.2	chr11	65652660	65652707	(69433915)	+	(CCGCC)n	Simple_repeat	1	48	(0)	667895
321	31.6	17.3	5.2	chr11	67744561	67744964	(67341658)	C	Tigger19b	DNA/TcMar-Tigger	(74)	476	14	672170
275	29.2	12.0	5.8	chr11	70655826	70655981	(64430641)	C	MER5B	DNA/hAT-Charlie	(0)	178	12	677166
15	11.8	8.1	0.0	chr11	73141921	73141957	(61944665)	+	GA-rich	Low_complexity	1	40	(0)	681262
11	19.5	0.0	8.3	chr11	75241019	75241066	(59845556)	+	(GGCGCG)n	Simple_repeat	1	48	(0)	685612
556	32.6	7.9	2.8	chr11	76010701	76011025	(59075597)	C	L2c	LINE/L2	(340)	3079	2737	687194
17	19.8	3.2	4.6	chr11	76380840	76380902	(58705720)	+	(CGCC)n	Simple_repeat	1	65	(0)	687898
2109	14.8	0.7	0.0	chr11	84313111	84313413	(50773209)	C	AluSz6	SINE/Alu	(7)	305	1	702116
18	14.7	9.5	1.4	chr11	84313414	84313431	(50773191)	+	(ATT)n	Simple_repeat	1	19	(0)	702117
812	19.6	6.1	2.6	chr11	88472934	88473122	(46613500)	C	MER44B	DNA/TcMar-Tigger	(284)	266	71	708621
355	23.5	4.7	2.4	chr11	88473181	88473263	(46613359)	C	Tigger7	DNA/TcMar-Tigger	(2406)	85	1	708622
389	33.1	6.1	0.1	chr11	88473269	88473447	(46613175)	C	MIRc	SINE/MIR	(58)	210	17	708623
363	30.2	2.9	9.0	chr11	93288257	93288511	(41798111)	+	LTR67B	LTR/ERVL	72	310	(310)	715389
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
18	7.6	0.0	0.0	chr11	94543836	94543863	(40542759)	+	(CTCC)n	Simple_repeat	1	28	(0)	717311
15	20.5	0.0	2.4	chr11	94544397	94544437	(40542185)	+	(CAGCGG)n	Simple_repeat	1	41	(0)	717312
15	25.8	0.0	3.7	chr11	94544528	94544581	(40542041)	+	(CGG)n	Simple_repeat	1	54	(0)	717313
12	25.1	3.2	4.7	chr11	95067557	95067618	(40019004)	+	(GGC)n	Simple_repeat	1	64	(0)	718067
2010	12.9	2.9	3.5	chr11	98733037	98733287	(36353335)	+	LTR28	LTR/ERV1	1	254	(766)	722894
2508	30.9	11.8	5.8	chr11	109742447	109744022	(25342600)	C	L2a	LINE/L2	(165)	3261	1560	738733
190	25.3	7.4	8.5	chr11	114148983	114149064	(20937558)	C	L2c	LINE/L2	(2)	3385	3305	745808
430	28.8	9.7	0.7	chr11	114149135	114149274	(20937348)	C	MIR3	SINE/MIR	(26)	182	29	745809
293	22.4	0.0	1.5	chr11	115572810	115572877	(19513745)	+	LTR16A	LTR/ERVL	6	72	(379)	747851
3254	22.8	4.0	4.0	chr11	115572958	115573775	(19512847)	+	MER45B	DNA/hAT-Tip100	46	863	(177)	747852
530	22.5	2.6	0.0	chr11	120534882	120534992	(14551630)	C	MER81	DNA/hAT-Blackjack	(0)	114	1	756720
923	20.9	7.0	0.5	chr11	120535012	120535199	(14551423)	C	MER63A	DNA/hAT-Blackjack	(5)	205	5	756721
41	33.6	1.2	0.6	chr11	122490382	122490547	(12596075)	+	(TTA)n	Simple_repeat	1	168	(0)	759656
2030	12.0	0.0	0.7	chr11	123145453	123145763	(11940859)	C	AluSx1	SINE/Alu	(0)	312	1	760948
18	17.5	3.6	3.5	chr11	123431170	123431224	(11655398)	+	(CGTCC)n	Simple_repeat	1	57	(0)	761531
186	34.8	2.2	6.3	chr11	125129629	125129723	(9956899)	+	MIR3	SINE/MIR	105	195	(13)	764017
384	33.9	3.0	2.2	chr11	125208836	125209064	(9877558)	C	L2c	LINE/L2	(1338)	2081	1851	764145
306	31.1	8.8	1.5	chr11	125209109	125209245	(9877377)	C	MIRc	SINE/MIR	(7)	261	114	764146
105	35.7	3.8	3.9	chr11	126437153	126438029	(8648593)	+	(CA)n	Simple_repeat	1	910	(0)	766090
8857	14.0	3.1	7.9	chr11	128214168	128215829	(6870793)	C	LTR12C	LTR/ERV1	(0)	1579	1	768603
446	31.0	6.9	9.8	chr11	128948519	128948965	(6137657)	+	L1MEg	LINE/L1	189	621	(5621)	769615
2533	22.4	8.3	8.7	chr11	128949059	128949293	(6137329)	+	L1MEg	LINE/L1	637	875	(5367)	769615
2404	11.4	0.0	0.7	chr11	128949294	128949601	(6137021)	+	AluSq2	SINE/Alu	1	306	(7)	769616
23	15.4	2.5	4.9	chr11	130314765	130314825	(4771797)	+	G-rich	Low_complexity	1	59	(0)	771694
19	14.1	0.0	4.7	chr11	130314827	130314869	(4771753)	+	(GCC)n	Simple_repeat	1	43	(0)	771695
16	8.9	0.0	9.3	chr11	130314958	130315000	(4771622)	+	G-rich	Low_complexity	1	43	(0)	771696
348	28.6	5.8	2.0	chr11	131530149	131530248	(3556374)	+	L2b	LINE/L2	3272	3375	(0)	773433
20453	15.7	1.9	2.9	chr12	1337116	1339566	(131935743)	C	L1PA13	LINE/L1	(3555)	3211	1020	780496
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
5748	13.7	2.2	0.6	chr12	13805598	13806911	(119468398)	C	L1MA8	LINE/L1	(0)	6291	4955	800334
240	21.8	3.5	0.0	chr12	15683874	15683928	(117591381)	C	MIRc	SINE/MIR	(51)	217	161	803133
388	27.1	11.9	0.0	chr12	15683965	15684097	(117591212)	C	L2a	LINE/L2	(12)	3414	3264	803134
345	23.0	16.6	0.0	chr12	20754310	20754435	(112520874)	C	MIRb	SINE/MIR	(114)	154	4	810065
778	31.1	12.4	6.1	chr12	29564136	29564991	(103710318)	C	L2a	LINE/L2	(903)	2516	1599	822534
1645	21.8	4.8	1.2	chr12	29748740	29749156	(103526153)	+	MER63B	DNA/hAT-Blackjack	1	433	(3)	822807
13	16.4	0.0	7.5	chr12	29783878	29783917	(103491392)	+	(CCG)n	Simple_repeat	1	40	(0)	822853
2167	15.0	6.5	5.7	chr12	30388603	30389026	(102886283)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	823639
1416	27.1	4.5	3.9	chr12	40351903	40352339	(92922970)	C	LTR16A1	LTR/ERVL	(0)	456	17	833680
1841	18.8	2.9	0.7	chr12	41325974	41326277	(91949032)	C	AluJb	SINE/Alu	(1)	311	1	834910
17	17.9	7.5	2.8	chr12	49539065	49539131	(83736178)	+	(GCCGAA)n	Simple_repeat	1	72	(0)	847403
17	16.3	6.8	3.2	chr12	49707425	49707483	(83567826)	+	(CCGCG)n	Simple_repeat	1	63	(0)	847645
13	29.6	0.0	3.5	chr12	49707465	49707521	(83567788)	+	(CCCT)n	Simple_repeat	1	57	(0)	847646
505	13.9	0.0	0.0	chr12	54750354	54750425	(78524884)	C	AluSp	SINE/Alu	(10)	303	232	856949
451	12.7	0.0	0.0	chr12	56766993	56767055	(76508254)	C	AluSz6	SINE/Alu	(172)	140	78	860220
514	21.2	4.4	7.4	chr12	56767059	56767221	(76508088)	+	MIRb	SINE/MIR	3	160	(108)	860221
13	13.2	0.0	0.0	chr12	57292463	57292487	(75982822)	+	(AAAC)n	Simple_repeat	1	25	(0)	860962
20	17.4	0.0	2.1	chr12	57430479	57430525	(75844784)	+	(CCGCCCC)n	Simple_repeat	1	47	(0)	861299
17	28.0	1.5	1.5	chr12	57430640	57430705	(75844604)	+	(CGCC)n	Simple_repeat	1	67	(0)	861300
14	24.1	1.4	6.8	chr12	57430746	57430833	(75844476)	+	(GCCCCG)n	Simple_repeat	1	83	(0)	861301
15	19.9	3.6	3.5	chr12	57430880	57430934	(75844375)	+	G-rich	Low_complexity	1	57	(0)	861302
15	24.6	0.0	0.0	chr12	57431143	57431185	(75844124)	+	(CGCACG)n	Simple_repeat	1	43	(0)	861303
12	31.2	0.0	0.0	chr12	57431186	57431196	(75844113)	+	(CGCA)n	Simple_repeat	1	54	(0)	861304
2171	15.0	3.5	7.8	chr12	58905531	58905978	(74369331)	+	MSTC	LTR/ERVL-MaLR	1	428	(0)	863376
16	22.7	3.7	1.8	chr12	64781090	64781098	(68494211)	+	(GGC)n	Simple_repeat	1	53	(0)	871797
18	13.8	2.4	2.3	chr12	64781099	64781140	(68494169)	+	(GGCCGCG)n	Simple_repeat	1	43	(0)	871798
12	19.3	4.7	2.2	chr12	65653634	65653655	(67621654)	+	(ATACACC)n	Simple_repeat	1	43	(0)	873123
15	5.6	0.0	0.0	chr12	65653656	65653674	(67621635)	+	(AC)n	Simple_repeat	1	19	(0)	873124
2633	13.9	2.5	0.0	chr12	74745149	74745587	(58529722)	C	L1PA15	LINE/L1	(4)	6161	5712	886628
30	10.0	0.0	5.1	chr12	79691010	79691068	(53584241)	+	GA-rich	Low_complexity	1	59	(0)	893882
2103	17.7	3.5	2.9	chr12	85167243	85167786	(48107523)	C	MLT2A1	LTR/ERVL	(2)	552	1	901265
5778	10.6	5.1	0.8	chr12	85167787	85168918	(48106391)	C	HERVL-int	LTR/ERVL	(0)	5654	4474	901265
612	36.7	6.9	0.7	chr12	86790950	86791285	(46484024)	+	LTR81	LTR/Gypsy	478	987	(363)	903408
21	16.8	6.5	1.5	chr12	92145536	92145597	(41129712)	+	(GGC)n	Simple_repeat	1	66	(0)	911015
26	12.3	0.0	0.0	chr12	93241705	93241748	(40033561)	+	(ACAC)n	Simple_repeat	1	44	(0)	913013
1164	21.5	7.7	0.7	chr12	93241757	93242047	(40033262)	+	MER110A	LTR/ERV1	44	356	(112)	913014
725	27.6	5.5	3.4	chr12	93636721	93637076	(39638233)	C	L1MEh	LINE/L1	(1185)	1050	687	913860
12	16.8	10.6	0.0	chr12	94649867	94649913	(38625396)	+	(CCGCGCT)n	Simple_repeat	1	52	(0)	915565
19	24.0	0.0	5.6	chr12	94650284	94650355	(38624954)	+	(CCGC)n	Simple_repeat	1	67	(0)	915566
14	25.8	3.6	0.0	chr12	95790434	95790488	(37484821)	+	G-rich	Low_complexity	1	57	(0)	917877
395	32.3	9.5	2.9	chr12	96618300	96618720	(36656589)	C	L2	LINE/L2	(1646)	1773	1322	919425
253	28.3	10.8	2.0	chr12	96618787	96618887	(36656422)	C	Chap1_Mam	DNA/hAT-Charlie	(90)	252	142	919428
1523	18.7	0.4	0.0	chr12	96618923	96619163	(36656146)	C	AluJb	SINE/Alu	(70)	242	1	919429
627	23.1	13.3	9.3	chr12	99023510	99023644	(34251665)	C	L1MEd	LINE/L1	(5697)	1406	1281	923281
300	27.4	17.2	0.0	chr12	99023672	99023777	(34251532)	C	L1MEd	LINE/L1	(5899)	1204	1077	923281
13	26.2	0.0	2.3	chr12	100142485	100142527	(33132782)	+	(CGC)n	Simple_repeat	1	43	(0)	924964
307	27.3	7.0	4.2	chr12	100717873	100718046	(32557263)	+	MIRb	SINE/MIR	33	216	(52)	926068
12	16.6	4.5	4.3	chr12	105107671	105107714	(28167595)	+	(GAGCCG)n	Simple_repeat	1	46	(0)	933857
15	21.0	2.6	0.0	chr12	107093550	107093588	(26181721)	+	(GCC)n	Simple_repeat	1	40	(0)	937395
569	32.2	9.0	4.9	chr12	108680057	108680301	(24595008)	C	L2b	LINE/L2	(10)	3365	3110	940785
14	17.6	0.0	4.8	chr12	109309737	109309778	(23965531)	+	(GGCGCGG)n	Simple_repeat	1	42	(0)	942260
44	17.3	2.2	0.0	chr12	109309904	109310008	(23965301)	+	(GCG)n	Simple_repeat	1	107	(0)	942261
26	6.3	0.0	0.0	chr12	109714197	109714230	(23561079)	+	(CCG)n	Simple_repeat	1	34	(0)	943153
25	10.6	0.0	0.0	chr12	110123955	110123995	(23151314)	+	(ATGA)n	Simple_repeat	1	41	(0)	944094
59	12.1	4.1	2.3	chr12	110124162	110124284	(23151025)	+	(GCCCC)n	Simple_repeat	1	128	(0)	944095
15	28.0	0.0	0.0	chr12	110124288	110124326	(23150983)	+	(GC)n	Simple_repeat	1	39	(0)	944096
460	10.6	3.4	4.5	chr12	111011392	111011480	(22263829)	C	THE1B	LTR/ERVL-MaLR	(83)	281	194	946119
12	22.2	9.8	2.2	chr12	111368932	111369013	(21906296)	+	(CGGCGA)n	Simple_repeat	1	90	(0)	946920
14	13.1	0.0	0.0	chr12	111368992	111369017	(21906292)	+	(CGG)n	Simple_repeat	1	26	(0)	946921
264	28.9	36.9	7.3	chr12	112198442	112198740	(21076569)	C	L2c	LINE/L2	(564)	2855	2423	948668
1510	27.5	6.7	6.6	chr12	112198741	112199363	(21075946)	C	LTR87	LTR/ERVL?	(0)	624	1	948669
480	32.8	3.5	4.8	chr12	115835289	115835415	(17439894)	C	L1ME3G	LINE/L1	(299)	625	503	956882
507	19.9	10.0	1.2	chr12	115835461	115835633	(17439676)	+	L2a	LINE/L2	2935	3124	(302)	956884
1725	13.9	12.4	11.6	chr12	115835634	115835862	(17439447)	+	L1MA4	LINE/L1	5856	6070	(230)	956885
1795	24.6	5.3	2.4	chr12	116433169	116433810	(16841499)	+	L1MC4	LINE/L1	7339	8042	(0)	958035
1847	17.6	0.0	1.0	chr12	116433819	116434120	(16841189)	+	AluJr	SINE/Alu	1	299	(13)	958036
254	29.5	0.0	0.0	chr12	120037129	120037189	(13238120)	+	L2b	LINE/L2	3310	3370	(5)	966112
18	3.5	0.0	6.1	chr12	120640535	120640567	(12634742)	+	(GGGCG)n	Simple_repeat	1	33	(0)	967574
26	17.3	5.5	1.3	chr12	120640784	120640856	(12634453)	+	(GCCGC)n	Simple_repeat	1	77	(0)	967575
18	7.2	0.0	3.2	chr12	120640904	120640934	(12634375)	+	(GGC)n	Simple_repeat	1	31	(0)	967576
15	19.9	5.4	3.4	chr12	120641128	120641183	(12634126)	+	(CGC)n	Simple_repeat	1	59	(0)	967577
833	26.8	5.4	6.6	chr12	120889283	120889741	(12385568)	+	MLT1H	LTR/ERVL-MaLR	1	549	(0)	968045
13	26.2	1.7	3.4	chr12	121626548	121626605	(11648704)	+	G-rich	Low_complexity	1	59	(0)	969869
347	33.9	0.5	1.0	chr12	124430889	124430978	(8844331)	+	(CA)n	Simple_repeat	1	90	(0)	976046
27	4.8	0.0	6.1	chr12	124430979	124431027	(8844282)	+	(CACACAGG)n	Simple_repeat	1	49	(0)	976047
347	33.9	0.5	1.0	chr12	124431028	124432268	(8843041)	+	(CA)n	Simple_repeat	1	1236	(0)	976048
1856	4.6	4.2	0.2	chr12	127165908	127166171	(6109138)	C	LSU-rRNA_Hsa	rRNA	(1)	5034	4720	981018
134	1.9	3.0	2.3	chr12	127166172	127166337	(6108972)	+	(CCGAGGCCGA)n	Simple_repeat	1	171	(0)	981019
603	29.0	12.3	1.5	chr12	127321683	127322022	(5953287)	+	MER113	DNA/hAT-Charlie	129	510	(11)	981281
2440	11.3	0.0	10.3	chr12	127322056	127322461	(5952848)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	981282
326	33.6	11.2	3.2	chr12	131009128	131009634	(2265675)	+	L1MC4	LINE/L1	7360	7912	(130)	987631
49	34.4	2.9	0.9	chr12	131009635	131009842	(2265467)	+	(TG)n	Simple_repeat	1	214	(0)	987632
668	20.9	3.2	1.9	chr12	131500851	131501006	(1774303)	+	MER2	DNA/TcMar-Tigger	2	159	(186)	988198
665	20.8	0.0	9.7	chr12	131501003	131501146	(1774163)	C	FLAM_A	SINE/Alu	(12)	130	1	988199
513	9.6	0.0	0.0	chr12	131501147	131501219	(1774090)	+	MER2	DNA/TcMar-Tigger	144	216	(129)	988200
512	19.6	0.0	0.0	chr12	131501221	131501312	(1773997)	+	MER47C	DNA/TcMar-Tigger	2	93	(4)	988201
215	38.0	0.8	0.8	chr12	132455399	132456329	(818980)	+	(TG)n	Simple_repeat	1	938	(0)	989480
20	16.3	3.3	4.8	chr13	25171211	25171270	(89193058)	+	(GCC)n	Simple_repeat	1	62	(0)	1001408
32	5.3	0.0	0.0	chr13	34942512	34942550	(79421778)	+	(GCAGCG)n	Simple_repeat	1	39	(0)	1016528
23	25.2	3.6	4.3	chr13	34942640	34942652	(79421676)	+	G-rich	Low_complexity	1	21	(95)	1016529
12	20.2	0.0	6.7	chr13	34942653	34942697	(79421631)	+	(GCCGG)n	Simple_repeat	1	45	(0)	1016530
23	25.2	3.6	4.3	chr13	34942698	34942751	(79421577)	+	G-rich	Low_complexity	22	116	(0)	1016529
13	18.0	0.0	2.9	chr13	34942836	34942869	(79421459)	+	G-rich	Low_complexity	1	34	(0)	1016531
22	21.9	1.7	1.6	chr13	34942883	34942942	(79421386)	+	(CGG)n	Simple_repeat	1	61	(0)	1016532
12	28.3	1.7	3.3	chr13	37059689	37059747	(77304581)	+	(GGCG)n	Simple_repeat	1	60	(0)	1019478
12	22.5	2.3	2.3	chr13	37059731	37059773	(77304555)	+	(GGAGCCT)n	Simple_repeat	1	44	(0)	1019479
1904	22.5	0.5	2.3	chr13	38022041	38022436	(76341892)	C	L1MA4A	LINE/L1	(6459)	1107	719	1020738
3287	14.8	6.0	1.2	chr13	44985423	44985974	(69378354)	+	Tigger1	DNA/TcMar-Tigger	2	584	(1834)	1031312
2052	27.3	7.6	5.7	chr13	45209669	45210719	(69153609)	+	L2a	LINE/L2	2351	3426	(0)	1031798
27	16.1	0.0	3.4	chr13	48303940	48303998	(66060330)	+	(GCC)n	Simple_repeat	1	59	(0)	1036634
12	15.3	5.3	2.5	chr13	48975985	48976022	(65388306)	+	(GCGGAG)n	Simple_repeat	1	40	(0)	1037665
2377	11.4	0.0	0.0	chr13	49727168	49727474	(64636854)	+	AluSx	SINE/Alu	3	309	(3)	1038919
7561	12.1	4.0	3.3	chr13	49727606	49727953	(64636375)	+	HSMAR2	DNA/TcMar-Mariner	2	347	(955)	1038920
30	11.8	8.0	1.2	chr13	51222279	51222353	(63141975)	+	(GGCGCG)n	Simple_repeat	1	81	(0)	1041254
13	8.5	0.0	3.7	chr13	51222574	51222600	(63141728)	+	(GCCGG)n	Simple_repeat	1	27	(0)	1041255
433	33.5	7.1	2.2	chr13	51290899	51291167	(63073161)	+	MamGypLTR1b	LTR/Gypsy	494	776	(6)	1041342
302	31.7	12.5	4.0	chr13	51291173	51291629	(63072699)	+	L2b	LINE/L2	2677	3184	(191)	1041343
25	25.2	4.1	0.0	chr13	62490050	62490122	(51874206)	+	(CT)n	Simple_repeat	1	76	(0)	1056074
3867	18.9	2.6	0.7	chr13	62851805	62852661	(51511667)	+	L1M1	LINE/L1	3824	4697	(1449)	1056521
786	38.9	5.8	3.1	chr13	63446180	63446752	(50917576)	C	Charlie17b	DNA/hAT-Charlie	(566)	638	50	1057287
1252	29.7	9.6	2.2	chr13	63729912	63730586	(50633742)	C	L2a	LINE/L2	(180)	3246	2508	1057661
5895	15.0	0.5	2.1	chr13	64133790	64135075	(50229253)	C	L1PB1	LINE/L1	(2772)	3374	2140	1058163
1252	22.9	10.8	0.0	chr13	64292760	64293073	(50071255)	C	LTR52-int	LTR/ERVL	(3204)	352	1	1058349
488	28.7	0.0	6.7	chr13	64424447	64424531	(49939797)	+	MIRb	SINE/MIR	2	84	(184)	1058500
6035	15.7	5.9	0.9	chr13	64424532	64425696	(49938632)	C	Tigger3b	DNA/TcMar-Tigger	(2)	1229	4	1058501
19420	14.7	3.3	1.5	chr13	64564571	64571278	(49793050)	C	L1PB1	LINE/L1	(5)	6862	6	1058704
4249	17.4	10.3	1.3	chr13	64571281	64571459	(49792869)	C	L1MC1	LINE/L1	(2841)	3480	3259	1058703
2524	6.5	0.3	0.7	chr13	64571460	64571486	(49792842)	C	AluYh3	SINE/Alu	(4)	307	281	1058705
2224	12.2	3.6	0.8	chr13	64762752	64763105	(49601223)	+	THE1B	LTR/ERVL-MaLR	1	364	(0)	1058956
1071	29.6	7.2	5.8	chr13	64763106	64763711	(49600617)	C	ERV3-16A3_I-int	LTR/ERVL	(539)	4687	4073	1058954
5126	16.6	1.5	1.1	chr13	65383041	65384413	(48979915)	C	L1PA15	LINE/L1	(3734)	2939	1431	1059738
857	26.8	2.6	1.3	chr13	65384411	65384637	(48979691)	C	L1PA15	LINE/L1	(6060)	633	404	1059738
1800	21.6	6.7	4.6	chr13	66224563	66225061	(48139267)	C	MER67D	LTR/ERV1	(4)	510	1	1060777
466	28.2	11.7	5.8	chr13	66225062	66225158	(48139170)	+	MER20B	DNA/hAT-Charlie	152	276	(507)	1060776
2358	14.7	6.7	1.5	chr13	66225159	66225567	(48138761)	+	MSTB1	LTR/ERVL-MaLR	1	432	(0)	1060778
1971	28.3	11.7	3.6	chr13	66299588	66299934	(48064394)	C	L2b	LINE/L2	(939)	2480	2078	1060862
15	10.4	3.0	2.9	chr13	66536329	66536361	(47827967)	+	(AAC)n	Simple_repeat	1	34	(0)	1061162
1121	28.4	1.1	4.1	chr13	66568000	66568366	(47795962)	+	MLT1A	LTR/ERVL-MaLR	1	356	(18)	1061200
30	14.5	0.0	0.0	chr13	66568403	66568456	(47795872)	+	(ACACAC)n	Simple_repeat	1	54	(0)	1061201
267	34.8	8.8	2.5	chr13	66816085	66816243	(47548085)	C	MIRb	SINE/MIR	(26)	242	73	1061495
12	21.8	2.7	0.0	chr13	66902265	66902301	(47462027)	+	A-rich	Low_complexity	1	38	(0)	1061606
18	17.5	0.0	0.0	chr13	66902562	66902594	(47461734)	+	(AC)n	Simple_repeat	1	33	(0)	1061607
248	23.6	1.8	0.0	chr13	67078698	67078752	(47285576)	+	L2c	LINE/L2	3276	3331	(56)	1061837
800	11.9	0.0	0.0	chr13	67079028	67079128	(47285200)	+	AluSx3	SINE/Alu	1	101	(210)	1061838
16	16.9	0.0	0.0	chr13	67614012	67614048	(46750280)	+	(T)n	Simple_repeat	1	37	(0)	1062491
43	0.0	0.0	0.0	chr13	67614200	67614238	(46750090)	+	(TTAT)n	Simple_repeat	1	39	(0)	1062492
13	3.6	2.9	8.6	chr13	68590085	68590118	(45774210)	+	(AATAAC)n	Simple_repeat	1	35	(0)	1063742
652	29.1	13.9	2.0	chr13	68751701	68752355	(45611973)	C	L1MC5a	LINE/L1	(154)	2623	1886	1063943
10198	13.2	2.1	0.5	chr13	68845134	68846736	(45517592)	+	MSTA-int	LTR/ERVL-MaLR	1	1630	(1)	1064054
1508	23.6	3.6	0.3	chr13	72690730	72691047	(41673281)	+	MLT1D	LTR/ERVL-MaLR	75	403	(102)	1069176
426	26.4	9.2	1.0	chr13	72691048	72691246	(41673082)	+	Charlie7	DNA/hAT-Charlie	2034	2250	(362)	1069177
8479	15.9	2.5	0.9	chr13	73275698	73276459	(41087869)	+	L1MB2	LINE/L1	3661	4432	(1708)	1070297
2193	16.2	5.9	0.7	chr13	73276460	73276863	(41087465)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	1070298
297	21.4	4.3	1.1	chr13	73682393	73682482	(40681846)	C	MER112	DNA/hAT-Charlie	(162)	99	7	1070940
1887	15.8	0.0	0.4	chr13	75563188	75563460	(38800868)	C	AluSz	SINE/Alu	(24)	288	17	1073566
1143	24.3	13.2	0.9	chr13	75563510	75563933	(38800395)	C	L1MA8	LINE/L1	(25)	6266	5783	1073567
34	6.7	2.1	0.0	chr13	76886255	76886302	(37478026)	+	(CGC)n	Simple_repeat	1	49	(0)	1075376
327	25.0	26.4	0.0	chr13	76901521	76901696	(37462632)	C	L2	LINE/L2	(2096)	1323	1085	1075401
17	22.7	1.9	1.9	chr13	77697597	77697649	(36666679)	+	(CCGCC)n	Simple_repeat	1	54	(0)	1076567
821	29.7	10.6	4.8	chr13	77703251	77703819	(36660509)	+	Tigger10	DNA/TcMar-Tigger	208	813	(1031)	1076576
438	22.5	16.5	1.4	chr13	78406173	78406316	(35958012)	+	MER96	DNA/hAT-Tip100	5	174	(1)	1077482
15	23.9	0.9	4.4	chr13	78603149	78603224	(35761104)	+	G-rich	Low_complexity	1	73	(0)	1077763
20	25.9	1.4	2.7	chr13	78603413	78603484	(35760844)	+	(GCT)n	Simple_repeat	1	73	(0)	1077764
3783	23.7	4.1	5.7	chr13	80415579	80417363	(33946965)	C	L1MCb	LINE/L1	(4897)	1854	3	1080319
33	3.1	0.0	0.0	chr13	81447963	81447995	(32916333)	+	(TG)n	Simple_repeat	1	33	(0)	1081576
1869	16.9	18.9	3.6	chr13	87833927	87834337	(26529991)	C	MER73	LTR/ERVL	(0)	644	177	1089536
2418	15.0	9.1	8.1	chr13	87834338	87834859	(26529469)	C	LTR64	LTR/ERV1	(0)	528	1	1089537
352	26.9	9.8	13.3	chr13	88361450	88361779	(26002549)	+	L1ME3D	LINE/L1	5652	5968	(274)	1090216
2485	29.4	17.1	11.9	chr13	91492757	91493204	(22871124)	+	L2a	LINE/L2	811	1308	(2111)	1094320
2627	9.7	1.3	0.0	chr13	91493205	91493596	(22870732)	C	L1MA2	LINE/L1	(0)	6304	5908	1094322
5413	12.7	2.9	0.9	chr13	93071122	93072215	(21292113)	+	L1PA15	LINE/L1	5035	6148	(17)	1096400
273	15.7	0.9	0.0	chr13	93596544	93596598	(20767730)	C	MLT2B4	LTR/ERVL	(0)	562	505	1097101
2598	18.3	7.4	0.5	chr13	94019802	94020383	(20343945)	C	L1MB7	LINE/L1	(2778)	3866	3242	1097694
341	27.5	3.8	4.8	chr13	94020396	94020582	(20343746)	C	L1MB7	LINE/L1	(7332)	185	1	1097694
22	24.6	1.4	1.4	chr13	94711389	94711458	(19652870)	+	(CCGCGG)n	Simple_repeat	1	70	(0)	1098774
31	5.6	0.0	0.0	chr13	94711553	94711590	(19652738)	+	(GCG)n	Simple_repeat	1	38	(0)	1098775
18	10.3	0.0	3.0	chr13	94711609	94711641	(19652687)	+	(GCG)n	Simple_repeat	1	33	(0)	1098775
14	18.4	2.7	0.0	chr13	94711678	94711714	(19652614)	+	(GCCGCCC)n	Simple_repeat	1	38	(0)	1098776
1310	27.9	12.3	6.7	chr13	100379398	100379532	(13984796)	+	L1M4	LINE/L1	4415	4553	(1590)	1107869
2509	11.2	0.6	0.6	chr13	100379533	100379892	(13984436)	C	THE1B	LTR/ERVL-MaLR	(0)	364	5	1107870
1310	27.9	12.3	6.7	chr13	100379893	100380032	(13984296)	+	L1M4	LINE/L1	4554	4688	(1455)	1107869
412	17.1	2.9	5.3	chr13	113795424	113796567	(567761)	+	(CACACCA)n	Simple_repeat	1	1177	(0)	1125032
9331	11.1	0.8	15.1	chr14	30546233	30548073	(76495645)	C	LTR12C	LTR/ERV1	(0)	1579	3	1141965
12	22.8	0.0	7.5	chr14	34060123	34060175	(72983543)	+	(GGCGC)n	Simple_repeat	1	53	(0)	1147172
191	36.8	1.1	2.2	chr14	36967722	36967810	(70075908)	C	L2b	LINE/L2	(51)	3324	3237	1152280
30	8.1	0.0	0.0	chr14	36967833	36967871	(70075847)	+	(TG)n	Simple_repeat	1	39	(0)	1152281
267	36.0	2.1	0.7	chr14	36968011	36968150	(70075568)	C	L2b	LINE/L2	(253)	3122	2981	1152280
13	13.1	2.7	5.3	chr14	50396967	50397003	(56646715)	+	(CCCG)n	Simple_repeat	1	38	(0)	1169909
277	27.8	7.0	8.9	chr14	51989095	51989240	(55054478)	+	L2c	LINE/L2	3242	3384	(3)	1172297
13	16.9	6.0	3.8	chr14	52553596	52553645	(54490073)	+	(GGCGCGG)n	Simple_repeat	1	53	(0)	1173110
15	31.8	0.0	0.0	chr14	63853205	63853262	(43190456)	+	G-rich	Low_complexity	1	58	(0)	1190226
282	37.9	2.7	0.0	chr14	64610371	64610511	(42433207)	C	L2b	LINE/L2	(31)	3344	3219	1191583
315	30.9	3.0	7.2	chr14	64610532	64610740	(42432978)	+	MLT1N2	LTR/ERVL-MaLR	328	527	(35)	1191584
369	28.0	3.9	2.3	chr14	67531125	67531136	(39512582)	C	MIRc	SINE/MIR	(135)	133	120	1196242
895	21.6	1.8	0.0	chr14	67531137	67531298	(39512420)	+	AluJo	SINE/Alu	138	302	(10)	1196243
369	28.0	3.9	2.3	chr14	67531299	67531413	(39512305)	C	MIRc	SINE/MIR	(149)	119	4	1196242
619	23.0	2.2	2.9	chr14	68176249	68176387	(38867331)	C	MIR	SINE/MIR	(122)	140	3	1197332
1110	22.2	9.0	11.2	chr14	68841290	68841689	(38202029)	+	MLT1B	LTR/ERVL-MaLR	1	390	(0)	1198339
3073	21.4	9.0	1.8	chr14	68841690	68842355	(38201363)	+	L1ME2z	LINE/L1	5542	6235	(209)	1198338
421	27.3	7.5	8.0	chr14	74392325	74392499	(32651219)	C	L2c	LINE/L2	(2)	3385	3212	1208444
2119	13.9	0.3	0.0	chr14	74392619	74392913	(32650805)	C	AluJb	SINE/Alu	(15)	297	2	1208445
15	21.6	2.3	0.0	chr14	74955452	74955494	(32088224)	+	G-rich	Low_complexity	1	44	(0)	1209463
14	3.2	12.5	0.0	chr14	75277104	75277135	(31766583)	+	(GCGGCC)n	Simple_repeat	1	36	(0)	1210109
13	9.7	5.4	5.1	chr14	77498731	77498767	(29544951)	+	(CAG)n	Simple_repeat	1	39	(0)	1214330
14	14.6	5.0	2.4	chr14	88554542	88554581	(18489137)	+	G-rich	Low_complexity	1	42	(0)	1230606
20	16.6	5.3	5.1	chr14	88554639	88554713	(18489005)	+	(CCGCTC)n	Simple_repeat	1	79	(0)	1230607
13	23.3	4.4	0.0	chr14	88554937	88554981	(18488737)	+	(GGAC)n	Simple_repeat	1	47	(0)	1230608
1702	18.2	4.5	0.0	chr14	89789125	89789486	(17254232)	C	L1MC3	LINE/L1	(0)	7785	7407	1232743
1390	14.8	0.8	0.8	chr14	89789483	89789727	(17253991)	C	L1MC3	LINE/L1	(2017)	5768	5524	1232743
842	10.8	0.0	1.7	chr14	93206568	93206687	(13837031)	C	AluJr	SINE/Alu	(194)	118	1	1239083
291	26.5	10.9	3.7	chr14	94027154	94027314	(13016404)	C	MIR3	SINE/MIR	(19)	189	16	1240494
48	15.6	1.1	0.0	chr14	99274710	99274797	(7768921)	+	(CCT)n	Simple_repeat	1	89	(0)	1249761
20	25.4	2.7	6.2	chr14	99971306	99971415	(7072303)	+	(CCGCCC)n	Simple_repeat	1	113	(0)	1250931
15	24.6	3.4	1.6	chr14	100306149	100306207	(6737511)	+	(CCCGC)n	Simple_repeat	1	61	(0)	1251630
1625	26.6	6.2	5.5	chr14	102793791	102794173	(4249545)	C	MLT1H1	LTR/ERVL-MaLR	(0)	555	166	1255705
4485	19.5	5.1	1.5	chr14	105549962	105550937	(1492781)	C	HERVIP10B3-int	LTR/ERV1	(1766)	5837	4825	1259831
310	31.9	1.1	7.1	chr14	105550905	105550940	(1492778)	+	MER31-int	LTR/ERV1	2392	2419	(2798)	1259832
1708	20.6	0.3	0.0	chr14	105550941	105551231	(1492487)	+	AluJr	SINE/Alu	1	292	(20)	1259833
268	8.7	4.2	0.0	chr14	106347833	106347878	(695840)	+	U3	snRNA	2	49	(168)	1260585
1817	13.9	2.4	1.4	chr14	106348081	106348367	(695351)	+	AluYi6	SINE/Alu	1	290	(21)	1260586
49	30.6	1.8	3.4	chr15	29968789	29969017	(72022172)	+	(GCC)n	Simple_repeat	1	233	(0)	1276305
32	22.2	0.0	0.0	chr15	52529060	52529132	(49462057)	+	(CGC)n	Simple_repeat	1	73	(0)	1311447
18	22.5	2.5	6.0	chr15	63504926	63505006	(38486183)	+	G-rich	Low_complexity	1	83	(0)	1328723
69	31.7	1.6	0.4	chr15	63897116	63897361	(38093828)	+	(AC)n	Simple_repeat	1	250	(0)	1329352
12	17.2	2.2	6.5	chr15	65792134	65792178	(36199011)	+	(CCCG)n	Simple_repeat	1	46	(0)	1333344
13	21.9	0.0	2.6	chr15	65792225	65792263	(36198926)	+	(GCCTCT)n	Simple_repeat	1	39	(0)	1333345
15	27.4	1.3	5.1	chr15	67066429	67066507	(34924682)	+	G-rich	Low_complexity	1	75	(0)	1336014
203	33.6	6.6	2.6	chr15	67841097	67841212	(34149977)	C	L2c	LINE/L2	(1)	3386	3266	1337206
1818	20.2	0.0	0.0	chr15	68484008	68484319	(33506870)	+	AluJo	SINE/Alu	1	312	(0)	1338421
78	16.0	2.7	3.2	chr15	68484321	68484481	(33506708)	+	GA-rich	Low_complexity	1	159	(0)	1338422
30	0.0	0.0	3.0	chr15	68484482	68484514	(33506675)	+	(AGGA)n	Simple_repeat	1	33	(0)	1338423
78	16.0	2.7	3.2	chr15	68484515	68484536	(33506653)	+	GA-rich	Low_complexity	160	182	(0)	1338424
18	3.8	0.0	3.5	chr15	68578895	68578923	(33412266)	+	(TCC)n	Simple_repeat	1	29	(0)	1338603
14283	10.9	4.8	1.8	chr15	69246735	69247991	(32743198)	C	Tigger1	DNA/TcMar-Tigger	(974)	1444	142	1339867
324	30.0	10.4	3.7	chr15	70100887	70101073	(31890116)	C	MIRb	SINE/MIR	(20)	248	48	1341467
505	33.9	8.4	4.6	chr15	70229427	70230358	(31760831)	C	L2c	LINE/L2	(75)	3312	2348	1341758
2502	16.7	3.0	0.0	chr15	70279122	70279534	(31711655)	C	MSTB	LTR/ERVL-MaLR	(0)	426	1	1341849
238	24.1	3.7	7.1	chr15	70279535	70279595	(31711594)	C	MIR3	SINE/MIR	(63)	145	85	1341848
224	14.5	4.8	5.8	chr15	70558586	70559230	(31431959)	+	(CA)n	Simple_repeat	1	676	(0)	1342368
2506	7.8	0.0	0.3	chr15	70786355	70786661	(31204528)	C	AluSq2	SINE/Alu	(1)	312	7	1342733
2223	16.2	4.7	3.6	chr15	71140148	71140564	(30850625)	C	MSTB1	LTR/ERVL-MaLR	(4)	428	7	1343273
253	34.9	9.7	8.0	chr15	72871526	72871787	(29119402)	C	L2c	LINE/L2	(76)	3311	3045	1346244
1880	18.9	2.6	9.1	chr15	72871899	72872392	(29118797)	+	MLT1C	LTR/ERVL-MaLR	7	467	(0)	1346245
19	20.0	2.2	0.0	chr15	73927408	73927453	(28063736)	+	(GGC)n	Simple_repeat	1	47	(0)	1347951
15	14.4	5.0	2.4	chr15	73927563	73927602	(28063587)	+	(GCC)n	Simple_repeat	1	42	(0)	1347952
16	14.7	0.0	0.0	chr15	74782153	74782207	(27208982)	+	(GCC)n	Simple_repeat	1	55	(0)	1349517
12	20.2	3.5	6.7	chr15	78811266	78811323	(23179866)	+	(GTCCG)n	Simple_repeat	1	60	(0)	1356625
25	11.8	0.0	4.0	chr15	78811423	78811472	(23179717)	+	A-rich	Low_complexity	1	50	(0)	1356626
25	23.8	0.0	3.8	chr15	78811499	78811582	(23179607)	+	(CCCCG)n	Simple_repeat	1	80	(0)	1356627
1854	20.8	0.8	5.8	chr15	79167134	79167527	(22823662)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	1	1357368
1045	30.2	10.1	1.9	chr15	79663703	79663918	(22327271)	C	L2a	LINE/L2	(159)	3267	3029	1358188
2670	15.1	3.0	0.2	chr15	79663919	79664337	(22326852)	C	MSTB1	LTR/ERVL-MaLR	(1)	431	1	1358189
22	20.2	3.7	4.8	chr15	80404293	80404373	(21586816)	+	GA-rich	Low_complexity	1	84	(0)	1359476
19	26.2	1.2	5.8	chr15	80404332	80404417	(21586772)	+	(GGC)n	Simple_repeat	1	87	(0)	1359477
12	17.4	0.0	5.6	chr15	80404448	80404483	(21586706)	+	(CGCCC)n	Simple_repeat	1	36	(0)	1359478
13	18.9	2.8	0.0	chr15	80404686	80404721	(21586468)	+	(CAGCAT)n	Simple_repeat	1	37	(0)	1359479
36	2.7	0.0	0.0	chr15	81272907	81272944	(20718245)	+	(TTG)n	Simple_repeat	1	38	(0)	1361017
12	4.2	0.0	10.0	chr15	82047140	82047169	(19944020)	+	(CGCCC)n	Simple_repeat	1	30	(0)	1362238
285	24.9	6.8	7.3	chr15	82047615	82047816	(19943373)	+	MIR	SINE/MIR	12	220	(42)	1362239
6627	14.6	6.2	3.6	chr15	82289722	82291783	(19699406)	+	L1MCa	LINE/L1	966	3058	(3263)	1362650
12	21.1	8.2	0.0	chr15	83283327	83283375	(18707814)	+	(GGC)n	Simple_repeat	1	53	(0)	1364358
15	23.1	1.9	3.6	chr15	83283382	83283435	(18707754)	+	(CCG)n	Simple_repeat	1	55	(0)	1364359
19	9.8	9.1	0.0	chr15	83283880	83283923	(18707266)	+	(TTG)n	Simple_repeat	1	48	(0)	1364360
306	29.8	3.6	9.0	chr15	84547459	84547635	(17443554)	+	L1MEh	LINE/L1	40	206	(2259)	1366143
230	28.8	1.7	0.0	chr15	84981097	84981155	(17010034)	C	MIR	SINE/MIR	(168)	94	35	1367055
187	17.8	0.0	4.3	chr15	84981178	84981224	(17009965)	+	MIR3	SINE/MIR	81	125	(83)	1367056
21	22.1	1.7	1.6	chr15	84981671	84981730	(17009459)	+	(GGCGGC)n	Simple_repeat	1	61	(0)	1367057
14	18.2	0.0	0.0	chr15	84981965	84982000	(17009189)	+	(CCG)n	Simple_repeat	1	36	(0)	1367058
1785	24.9	13.4	2.7	chr15	86354666	86355223	(15635966)	+	MLT1E2	LTR/ERVL-MaLR	1	627	(0)	1369299
374	19.4	14.7	15.7	chr15	88353526	88353684	(13637505)	+	MLT1E1A	LTR/ERVL-MaLR	1	164	(396)	1372247
1644	24.5	5.6	2.1	chr15	88353738	88354117	(13637072)	+	MLT1E1A	LTR/ERVL-MaLR	286	679	(1)	1372247
2622	22.6	7.2	1.2	chr15	88505058	88505714	(13485475)	C	Kanga1	DNA/TcMar-Tc2	(997)	748	50	1372515
854	25.8	33.1	0.6	chr15	88563836	88564146	(13427043)	C	L2	LINE/L2	(472)	2947	2536	1372583
288	24.8	7.3	0.0	chr15	88564195	88564295	(13426894)	+	L2a	LINE/L2	3310	3418	(8)	1372584
15	18.3	0.0	2.6	chr15	88895325	88895363	(13095826)	+	(CCCTGC)n	Simple_repeat	1	39	(0)	1373212
234	24.7	10.5	1.3	chr15	89208656	89208733	(12782456)	+	HAL1ME	LINE/L1	111	196	(2269)	1373828
11	28.2	0.0	2.2	chr15	89334706	89334750	(12656439)	+	(CCCCCGG)n	Simple_repeat	1	45	(0)	1374040
669	0.0	0.0	0.0	chr15	89335073	89335145	(12656044)	+	tRNA-Arg-CGA_	tRNA	1	73	(3)	1374041
7052	25.4	12.7	1.8	chr15	89586399	89589443	(12401746)	C	L2a	LINE/L2	(0)	3426	2	1374525
309	26.7	8.2	0.7	chr15	89894364	89894499	(12096690)	C	L1ME3G	LINE/L1	(407)	517	371	1375096
1220	7.3	0.0	0.7	chr15	90372964	90373113	(11618076)	C	AluSg7	SINE/Alu	(160)	149	1	1376235
552	28.1	6.5	6.5	chr15	91806558	91806820	(10184369)	C	L2a	LINE/L2	(0)	3426	3164	1378899
354	39.0	4.6	1.6	chr15	91806874	91807126	(10184063)	C	L3	LINE/CR1	(45)	4054	3794	1378900
365	33.6	0.0	0.0	chr15	91807189	91807298	(10183891)	+	MIRb	SINE/MIR	99	208	(60)	1378901
550	24.5	8.1	6.4	chr15	92643378	92643574	(9347615)	+	L1ME4b	LINE/L1	691	891	(1)	1380153
13	23.3	0.0	2.4	chr15	92655438	92655479	(9335710)	+	(GCCGCT)n	Simple_repeat	1	42	(0)	1380169
298	26.4	1.1	6.2	chr15	92655988	92656084	(9335105)	C	MIRb	SINE/MIR	(41)	227	136	1380170
460	28.8	8.3	14.0	chr15	96710180	96710450	(5280739)	+	MIRb	SINE/MIR	1	254	(14)	1386255
17	21.4	2.7	6.6	chr15	100341683	100341756	(1649433)	+	(GCC)n	Simple_repeat	1	76	(0)	1391323
12	27.6	0.0	0.0	chr15	100341846	100341884	(1649305)	+	(CAG)n	Simple_repeat	1	39	(0)	1391324
210	28.0	14.7	0.0	chr15	101488563	101488655	(502534)	C	MIRb	SINE/MIR	(74)	194	86	1392849
236	32.5	0.0	0.0	chr15	101645911	101645993	(345196)	+	L1M2	LINE/L1	5485	5567	(724)	1393057
737	27.2	8.9	2.5	chr15	101646120	101646540	(344649)	+	L1ME3E	LINE/L1	5769	6234	(9)	1393056
1937	7.0	13.1	0.4	chr16	402163	402434	(89935911)	C	AluSx	SINE/Alu	(0)	312	1	1394695
13	25.8	4.7	4.5	chr16	636269	636353	(89701992)	+	(CCGCGG)n	Simple_repeat	1	89	(0)	1395036
20	26.3	3.5	2.3	chr16	1308924	1309008	(89029337)	+	(CGCCCC)n	Simple_repeat	1	88	(0)	1395731
27	0.0	0.0	0.0	chr16	4868913	4868938	(85469407)	+	(GTCT)n	Simple_repeat	1	26	(0)	1402045
301	21.1	1.1	1.3	chr16	15055601	15055692	(75282653)	+	MIR3	SINE/MIR	65	148	(60)	1423501
14	9.3	2.5	7.3	chr16	15056033	15056072	(75282273)	+	(GCCGCCC)n	Simple_repeat	1	41	(0)	1423502
314	21.7	0.0	0.0	chr16	22373917	22373985	(67964360)	+	MIR	SINE/MIR	159	227	(35)	1439919
211	28.2	7.2	4.9	chr16	25240798	25240879	(65097466)	+	L2a	LINE/L2	2896	2979	(440)	1446555
1323	13.0	7.2	0.5	chr16	27589757	27589999	(62748346)	C	AluSx1	SINE/Alu	(0)	312	78	1451471
333	25.0	7.0	3.4	chr16	27590072	27590278	(62748067)	C	HAL1ME	LINE/L1	(1358)	1107	893	1451472
773	12.4	2.4	0.0	chr16	27590311	27590462	(62747883)	C	FLAM_C	SINE/Alu	(0)	143	10	1451473
11	9.7	8.6	2.6	chr16	28879981	28880015	(61458330)	+	(GCCCCT)n	Simple_repeat	1	38	(0)	1454637
14	15.7	0.0	5.1	chr16	30021418	30021456	(60316889)	+	(GGAGATG)n	Simple_repeat	1	39	(0)	1457090
378	32.1	1.2	12.0	chr16	30021886	30021966	(60316379)	+	MIR	SINE/MIR	83	154	(108)	1457091
330	24.4	1.2	2.4	chr16	34071698	34071779	(56266566)	+	AluJb	SINE/Alu	208	288	(24)	1463578
28	6.5	4.4	6.3	chr16	34078560	34078650	(56259695)	+	(CGAATGGAAT)n	Simple_repeat	1	95	(0)	1463587
26	2.1	7.5	3.5	chr16	34699521	34699573	(55638772)	+	(TGATGATTCCAT)n	Simple_repeat	1	57	(0)	1464055
18522	10.4	1.2	1.2	chr16	35663756	35668941	(54669404)	+	L1PA6	LINE/L1	9	5177	(969)	1465039
12	17.5	3.1	0.0	chr16	47038159	47038190	(43300155)	+	G-rich	Low_complexity	1	33	(0)	1466605
260	21.7	9.9	6.9	chr16	47143451	47143941	(43194404)	+	LTR12C	LTR/ERV1	122	628	(951)	1466777
22	15.1	1.8	3.6	chr16	47143991	47144079	(43194266)	+	(CCCGC)n	Simple_repeat	1	87	(0)	1466778
17	29.4	0.0	3.0	chr16	57284711	57284776	(33053569)	+	(CCG)n	Simple_repeat	1	66	(0)	1484720
690	19.8	0.0	0.0	chr16	57285059	57285169	(33053176)	+	AluJr	SINE/Alu	1	111	(201)	1484721
219	31.2	17.4	1.9	chr16	61707314	61707473	(28630872)	C	MIRb	SINE/MIR	(76)	192	3	1492237
1422	18.7	7.0	12.1	chr16	65124706	65125234	(25213111)	+	L1MB7	LINE/L1	5621	6120	(64)	1497458
13	28.9	1.4	5.3	chr16	66751777	66751850	(23586495)	+	(GGC)n	Simple_repeat	1	75	(0)	1500337
272	28.1	0.0	2.4	chr16	66752068	66752151	(23586194)	C	MIRc	SINE/MIR	(115)	153	72	1500338
14	17.9	6.5	4.5	chr16	67014089	67014150	(23324195)	+	(CCGC)n	Simple_repeat	1	66	(0)	1500882
316	29.8	16.1	2.7	chr16	67115156	67115602	(23222743)	C	L2a	LINE/L2	(0)	3426	2818	1501126
15	15.9	2.9	0.0	chr16	67279108	67279142	(23059203)	+	(CCCCG)n	Simple_repeat	1	36	(0)	1501368
13	21.6	4.7	4.5	chr16	67279303	67279366	(23058979)	+	G-rich	Low_complexity	1	67	(0)	1501369
15	13.8	0.0	2.9	chr16	67279460	67279493	(23058852)	+	(GGCGC)n	Simple_repeat	1	34	(0)	1501370
16	17.4	0.0	4.7	chr16	67842337	67842379	(22495966)	+	(GCGG)n	Simple_repeat	1	43	(0)	1502467
13	16.8	0.0	5.4	chr16	67968139	67968175	(22370170)	+	(GCCG)n	Simple_repeat	1	37	(0)	1502651
18	23.8	0.0	0.0	chr16	73549793	73549829	(16788516)	+	(T)n	Simple_repeat	1	37	(0)	1513173
335	27.9	17.0	5.8	chr16	74692531	74692892	(15645453)	+	MLT1I	LTR/ERVL-MaLR	1	411	(0)	1515235
19	19.2	0.0	0.0	chr16	79770190	79770225	(10568120)	+	(GT)n	Simple_repeat	1	36	(0)	1524121
15	10.0	0.0	0.0	chr16	79770262	79770283	(10568062)	+	(GT)n	Simple_repeat	1	22	(0)	1524121
924	29.8	4.1	7.6	chr16	80904527	80904840	(9433505)	C	LTR16C	LTR/ERVL	(67)	422	114	1526099
303	30.8	8.2	0.7	chr16	80904991	80905137	(9433208)	+	Tigger13a	DNA/TcMar-Tigger	3	161	(610)	1526101
274	19.7	10.1	0.0	chr16	84237663	84237733	(6100612)	C	L2c	LINE/L2	(5)	3382	3304	1532404
327	30.7	4.2	2.8	chr16	84237792	84237932	(6100413)	+	MIRb	SINE/MIR	34	176	(92)	1532405
2333	9.3	0.3	1.0	chr16	84412815	84413115	(5925230)	+	AluSq2	SINE/Alu	2	300	(13)	1532788
2293	7.1	0.0	1.4	chr16	86844329	86844623	(3493722)	C	AluSg7	SINE/Alu	(17)	292	2	1537343
41	25.7	2.3	2.3	chr16	88356439	88356566	(1981779)	+	(TG)n	Simple_repeat	1	131	(0)	1539856
185	36.0	5.7	2.0	chr16	88356868	88356969	(1981376)	+	MIRb	SINE/MIR	49	154	(114)	1539857
440	30.5	5.0	8.7	chr16	89491640	89491757	(846588)	+	MIR	SINE/MIR	38	161	(101)	1541348
1910	7.9	11.6	0.0	chr16	89872751	89873017	(465328)	C	AluSx	SINE/Alu	(10)	302	1	1542008
1829	11.5	7.7	0.0	chr17	889415	889702	(82367739)	+	AluSx	SINE/Alu	1	312	(0)	1545975
65	9.2	2.4	3.9	chr17	889703	889792	(82367649)	+	GA-rich	Low_complexity	33	124	(0)	1545976
2256	7.8	3.3	0.3	chr17	1456626	1456920	(81800521)	C	AluSx	SINE/Alu	(8)	304	1	1547173
14	8.2	3.9	0.0	chr17	4142924	4142949	(79114492)	+	(GCC)n	Simple_repeat	1	27	(0)	1552422
39	23.8	4.3	2.1	chr17	4499070	4499207	(78758234)	+	(CGG)n	Simple_repeat	1	144	(0)	1553217
14	12.8	2.6	5.1	chr17	4949608	4949645	(78307796)	+	G-rich	Low_complexity	1	39	(0)	1554114
11	30.5	0.0	2.0	chr17	4949901	4949950	(78307491)	+	(CGCCCCC)n	Simple_repeat	1	50	(0)	1554115
22	18.8	3.5	9.2	chr17	4949989	4950104	(78307337)	+	G-rich	Low_complexity	1	120	(0)	1554116
1334	25.8	6.1	3.7	chr17	5640590	5640971	(77616470)	C	MLT1G3	LTR/ERVL-MaLR	(203)	392	1	1555510
697	26.4	3.0	0.8	chr17	7174610	7176778	(76080663)	+	(CA)n	Simple_repeat	1	2233	(0)	1558389
15	31.6	0.0	3.0	chr17	8189693	8189758	(75067683)	+	(CCT)n	Simple_repeat	1	66	(0)	1560268
653	0.0	0.0	0.0	chr17	8222238	8222309	(75035132)	C	tRNA-Asp-GAY	tRNA	(3)	72	1	1560360
213	27.3	8.3	0.0	chr17	8525459	8525513	(74731928)	+	L2a	LINE/L2	3362	3421	(5)	1560958
2342	10.3	0.0	0.0	chr17	8525791	8526090	(74731351)	C	AluSx4	SINE/Alu	(10)	300	1	1560959
2189	11.2	1.0	1.0	chr17	8650705	8651009	(74606432)	+	AluSq2	SINE/Alu	1	305	(8)	1561168
22	3.9	0.0	0.0	chr17	8651021	8651047	(74606394)	+	(A)n	Simple_repeat	1	27	(0)	1561169
369	25.6	4.5	13.4	chr17	8651065	8651258	(74606183)	C	LTR81A	LTR/Gypsy	(172)	1178	1003	1561170
347	27.7	15.0	3.0	chr17	19874221	19874558	(63382883)	C	LTR16A	LTR/ERVL	(0)	451	66	1581449
3146	15.6	4.3	0.0	chr17	20122479	20123016	(63134425)	C	L1MB3	LINE/L1	(1)	6182	5621	1581982
5174	18.9	2.9	1.5	chr17	20943981	20945044	(62312397)	C	L1M1	LINE/L1	(5799)	1766	16	1583365
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
476	28.6	12.0	1.0	chr17	27455571	27455778	(55801663)	C	MIR	SINE/MIR	(0)	262	29	1586828
18	6.8	3.2	0.0	chr17	27456279	27456309	(55801132)	+	(GGGAG)n	Simple_repeat	1	32	(0)	1586829
29	0.0	0.0	0.0	chr17	30291955	30291981	(52965460)	+	(CGG)n	Simple_repeat	1	27	(0)	1592285
16	16.5	3.8	5.5	chr17	31008692	31008744	(52248697)	+	(CCG)n	Simple_repeat	1	55	(0)	1593821
280	34.1	4.2	0.0	chr17	31266066	31266156	(51991285)	+	MIRb	SINE/MIR	4	98	(170)	1594267
993	4.0	0.0	0.0	chr17	32822870	32822994	(50434447)	+	L1PA5	LINE/L1	6030	6154	(0)	1597471
47	0.0	0.0	0.0	chr17	35567518	35567560	(47689881)	+	(AAAT)n	Simple_repeat	1	43	(0)	1602410
1206	12.3	0.0	0.6	chr17	35567561	35567731	(47689710)	+	AluSx	SINE/Alu	133	302	(10)	1602411
13	24.0	2.2	2.1	chr17	35795625	35795670	(47461771)	+	G-rich	Low_complexity	1	47	(0)	1602817
23	14.5	0.0	0.0	chr17	38751735	38751772	(44505669)	+	(A)n	Simple_repeat	1	38	(0)	1608488
698	1.3	0.0	0.0	chr17	38751778	38751854	(44505587)	C	tRNA-Asn-AAC	tRNA	(0)	77	1	1608489
184	4.2	4.0	4.5	chr17	42221893	42222215	(41035226)	+	(TG)n	Simple_repeat	1	336	(0)	1615176
668	25.2	0.0	0.0	chr17	42222544	42222674	(41034767)	C	FLAM_C	SINE/Alu	(11)	132	2	1615177
2380	7.9	0.3	1.0	chr17	42222681	42222983	(41034458)	C	AluSq2	SINE/Alu	(12)	301	1	1615178
21	23.8	3.9	4.7	chr17	42423106	42423207	(40834234)	+	(GGAGCG)n	Simple_repeat	1	106	(0)	1615601
20	22.3	3.5	0.0	chr17	43022172	43022228	(40235213)	+	(GGC)n	Simple_repeat	1	59	(0)	1616898
14	7.8	0.0	6.5	chr17	43022419	43022449	(40234992)	+	(GGGCG)n	Simple_repeat	1	31	(0)	1616899
371	30.8	10.1	2.4	chr17	43368998	43369416	(39888025)	C	L2	LINE/L2	(422)	2997	2543	1617637
12	19.6	2.9	0.0	chr17	44123383	44123417	(39134024)	+	(GGAGCGC)n	Simple_repeat	1	36	(0)	1619259
25	25.5	2.3	2.2	chr17	44123484	44123570	(39133871)	+	(GGC)n	Simple_repeat	1	89	(0)	1619260
12	17.8	6.2	5.9	chr17	44557402	44557465	(38699976)	+	(AGCGAG)n	Simple_repeat	1	68	(0)	1620208
16	23.8	2.0	1.9	chr17	44968026	44968076	(38289365)	+	(AGC)n	Simple_repeat	1	52	(0)	1621079
45	18.9	1.8	2.6	chr17	44968261	44968374	(38289067)	+	(CCGCCTC)n	Simple_repeat	1	116	(0)	1621080
13	0.0	0.0	0.0	chr17	45221750	45221766	(38035675)	+	(CGG)n	Simple_repeat	1	17	(0)	1621638
17	31.6	1.2	2.3	chr17	45221987	45222071	(38035370)	+	(CCCCCG)n	Simple_repeat	1	86	(0)	1621639
12	13.2	0.0	9.8	chr17	46771448	46771488	(36485953)	+	(GGCCCCG)n	Simple_repeat	1	41	(0)	1624683
29	0.0	0.0	0.0	chr17	46771761	46771788	(36485653)	+	(CCGCG)n	Simple_repeat	1	28	(0)	1624684
27	3.5	0.0	0.0	chr17	46771879	46771908	(36485533)	+	(CCCGCC)n	Simple_repeat	1	30	(0)	1624685
21	14.8	5.6	1.8	chr17	46771927	46771980	(36485461)	+	(CCG)n	Simple_repeat	1	57	(0)	1624686
212	30.0	15.7	0.0	chr17	47364091	47364160	(35893281)	+	MIRb	SINE/MIR	155	237	(31)	1625863
212	21.4	6.7	0.0	chr17	47364177	47364232	(35893209)	+	L2b	LINE/L2	2545	2604	(815)	1625864
12	25.9	0.0	2.3	chr17	47733335	47733377	(35524064)	+	(CCCGCCC)n	Simple_repeat	1	43	(0)	1626626
101	8.1	2.0	0.7	chr17	48647022	48647169	(34610272)	+	(GA)n	Simple_repeat	1	151	(0)	1628176
14	16.1	2.1	6.2	chr17	48817324	48817370	(34440071)	+	(CAGCC)n	Simple_repeat	1	48	(0)	1628551
365	28.5	11.3	0.6	chr17	48817498	48817663	(34439778)	+	MIRc	SINE/MIR	2	187	(81)	1628552
3786	17.6	1.9	0.9	chr17	53886345	53886995	(29370446)	C	Tigger1	DNA/TcMar-Tigger	(1760)	658	1	1637341
1670	18.5	13.6	1.7	chr17	55384665	55385071	(27872370)	C	MER31B	LTR/ERV1	(3)	463	1	1639539
1172	26.2	6.7	1.6	chr17	55385075	55385516	(27871925)	+	L2a	LINE/L2	2936	3401	(25)	1639540
254	16.1	24.3	0.0	chr17	56680324	56680379	(26577062)	C	L2a	LINE/L2	(2)	3424	3351	1641737
223	28.9	3.8	1.3	chr17	56680506	56680582	(26576859)	C	L3	LINE/CR1	(185)	3914	3836	1641736
281	40.4	2.9	2.2	chr17	56680632	56681185	(26576256)	C	Plat_L3	LINE/CR1	(360)	3226	2669	1641738
198	29.9	4.5	3.0	chr17	57350562	57350692	(25906749)	+	L2a	LINE/L2	2965	3097	(290)	1643128
15	0.0	0.0	0.0	chr17	57783306	57783324	(25474117)	+	(AGC)n	Simple_repeat	1	19	(0)	1643833
335	28.5	8.3	2.7	chr17	57783653	57783800	(25473641)	+	MIRb	SINE/MIR	58	214	(54)	1643834
900	19.5	1.7	0.0	chr17	57911082	57911255	(25346186)	C	MER5A	DNA/hAT-Charlie	(0)	189	13	1644097
613	18.0	0.0	0.0	chr17	60518415	60518503	(22738938)	C	AluJo	SINE/Alu	(223)	89	1	1649423
29	0.0	0.0	0.0	chr17	60518504	60518528	(22738913)	+	(GT)n	Simple_repeat	1	25	(0)	1649424
1510	16.2	6.4	0.8	chr17	60518538	60518802	(22738639)	C	AluJo	SINE/Alu	(30)	282	2	1649425
15	28.3	0.0	1.9	chr17	60600533	60600585	(22656856)	+	(CGC)n	Simple_repeat	1	53	(0)	1649630
11	21.5	6.0	1.9	chr17	61412641	61412690	(21844751)	+	(AGGCAC)n	Simple_repeat	1	53	(0)	1651017
201	33.8	2.9	9.5	chr17	61413330	61413476	(21843965)	C	MIR3	SINE/MIR	(16)	192	56	1651018
326	31.4	7.8	12.4	chr17	62021751	62021886	(21235555)	+	L2a	LINE/L2	3142	3259	(167)	1652101
14	27.5	2.9	2.8	chr17	63699781	63699849	(19557592)	+	(GCCCCGA)n	Simple_repeat	1	71	(0)	1655191
17	30.7	0.0	1.6	chr17	65056597	65056658	(18200783)	+	(GCC)n	Simple_repeat	1	62	(0)	1657850
13	20.4	5.6	3.5	chr17	65056651	65056704	(18200737)	+	(CGG)n	Simple_repeat	1	57	(0)	1657851
21	11.9	12.5	0.0	chr17	65056717	65056809	(18200632)	+	(GCAGG)n	Simple_repeat	1	104	(0)	1657852
2072	16.0	6.9	1.6	chr17	73800001	73800426	(9457015)	+	L1MC2	LINE/L1	5890	6339	(5)	1672973
11	17.3	7.7	0.0	chr17	74842433	74842471	(8414970)	+	(ACTCCAG)n	Simple_repeat	1	42	(0)	1674856
12	29.0	2.8	4.0	chr17	74843280	74843351	(8414090)	+	G-rich	Low_complexity	1	74	(0)	1674857
2249	10.6	0.0	0.0	chr17	75287862	75288173	(7969268)	+	AluSx1	SINE/Alu	1	312	(0)	1675769
265	29.6	4.2	12.0	chr17	75288214	75288447	(7968994)	+	L2b	LINE/L2	2930	3144	(231)	1675770
12	6.2	4.9	9.3	chr17	75878098	75878138	(7379303)	+	(AGGC)n	Simple_repeat	1	43	(0)	1676937
28	16.6	1.2	7.0	chr17	75878221	75878305	(7379136)	+	G-rich	Low_complexity	1	86	(0)	1676938
20	18.1	3.3	3.2	chr17	75878650	75878709	(7378732)	+	(CCGC)n	Simple_repeat	1	62	(0)	1676939
2749	13.6	2.8	0.0	chr17	76602940	76603351	(6654090)	C	MSTB	LTR/ERVL-MaLR	(2)	424	1	1678374
8760	15.8	7.2	3.9	chr17	76613942	76615466	(6641975)	C	LTR12C	LTR/ERV1	(0)	1579	2	1678387
21	14.8	0.0	4.1	chr17	78352959	78353007	(4904434)	+	G-rich	Low_complexity	1	49	(0)	1681716
20	26.2	4.4	4.2	chr17	78353008	78353058	(4904383)	+	(GCGGCC)n	Simple_repeat	23	118	(0)	1681715
14	14.2	3.2	0.0	chr17	78353182	78353212	(4904229)	+	(CGCC)n	Simple_repeat	1	32	(0)	1681717
12	22.7	6.4	0.0	chr17	78359989	78360035	(4897406)	+	(GGCG)n	Simple_repeat	1	50	(0)	1681726
14	26.5	0.0	3.8	chr17	78360287	78360339	(4897102)	+	(GCG)n	Simple_repeat	1	53	(0)	1681727
361	15.8	6.9	1.8	chr17	80024286	80025222	(3232219)	+	(CA)n	Simple_repeat	1	1002	(0)	1684319
367	30.8	6.0	1.3	chr17	81270189	81270484	(1986957)	+	L1ME4b	LINE/L1	321	483	(409)	1686045
12	17.4	1.4	12.0	chr17	81793795	81793868	(1463573)	+	(CCCCCAG)n	Simple_repeat	1	75	(0)	1686734
659	22.5	4.4	1.7	chr17	81793921	81794546	(1462895)	+	(CA)n	Simple_repeat	1	626	(0)	1686735
2393	8.4	0.0	0.0	chr17	82670535	82670831	(586610)	C	AluSg	SINE/Alu	(12)	298	2	1688061
442	25.1	1.8	7.9	chr17	82670981	82671157	(586284)	C	HAL1	LINE/L1	(127)	2380	2215	1688062
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
20	21.8	1.3	6.3	chr18	12308129	12308206	(68065079)	+	G-rich	Low_complexity	1	79	(0)	1707182
210	32.4	1.4	0.0	chr18	24462658	24462728	(55910557)	C	L2	LINE/L2	(1042)	2377	2306	1717995
13962	13.9	3.5	2.3	chr18	27294640	27297028	(53076257)	C	Tigger1	DNA/TcMar-Tigger	(0)	2418	1	1722218
15	12.0	0.0	0.0	chr18	31042243	31042269	(49331016)	+	(ACC)n	Simple_repeat	1	27	(0)	1727132
13	22.6	0.0	4.4	chr18	31042994	31043038	(49330247)	+	(CCCCG)n	Simple_repeat	1	45	(0)	1727133
1395	17.5	13.5	0.4	chr18	31913897	31914159	(48459126)	+	AluJr	SINE/Alu	7	309	(3)	1728404
14381	20.4	3.5	3.0	chr18	33236612	33241429	(47131856)	+	L1MA5A	LINE/L1	729	5640	(1922)	1730471
2170	23.6	4.3	4.6	chr18	33442180	33442624	(46930661)	+	MLT1E3	LTR/ERVL-MaLR	1	460	(164)	1730737
2121	14.6	0.3	0.7	chr18	33442625	33442925	(46930360)	+	AluSz	SINE/Alu	1	300	(12)	1730738
3064	13.0	8.0	0.2	chr18	33755180	33755665	(46617620)	C	LTR64	LTR/ERV1	(1)	527	1	1731105
2417	12.2	4.2	6.0	chr18	35091821	35092256	(45281029)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	1732838
4938	13.6	4.0	1.1	chr18	35092257	35092929	(45280356)	+	L1MA6	LINE/L1	4782	5482	(818)	1732835
15	4.2	4.0	0.0	chr18	35376959	35376983	(44996302)	+	(CCGCG)n	Simple_repeat	1	26	(0)	1733224
236	23.4	21.5	0.8	chr18	35377485	35377609	(44995676)	C	MIRc	SINE/MIR	(26)	242	85	1733225
5968	16.4	10.3	4.9	chr18	35586124	35587785	(44785500)	C	L1MD1	LINE/L1	(85)	5903	4101	1733557
1485	16.8	13.6	0.2	chr18	35587785	35588190	(44785095)	C	L1MD1	LINE/L1	(3126)	3411	2943	1733557
334	15.3	7.7	2.7	chr18	36267820	36267893	(44105392)	C	L1MD3	LINE/L1	(13)	7982	7905	1734565
54	34.6	1.3	1.2	chr18	37429299	37429535	(42943750)	+	(TG)n	Simple_repeat	1	240	(0)	1736035
331	29.4	4.5	2.6	chr18	37780230	37781893	(42591392)	+	(CA)n	Simple_repeat	1	1739	(0)	1736524
534	34.3	12.1	2.1	chr18	38286973	38287730	(42085555)	+	L2a	LINE/L2	2574	3425	(1)	1737171
2128	11.3	0.8	1.1	chr18	39122272	39122636	(41250649)	+	L1PBa	LINE/L1	3542	3905	(2957)	1738281
24145	3.3	0.1	0.0	chr18	39122635	39126345	(41246940)	+	L1PA3	LINE/L1	2440	6152	(3)	1738284
229	33.1	3.5	7.3	chr18	40299856	40300005	(40073280)	+	MIR	SINE/MIR	80	223	(39)	1739823
28122	17.0	7.8	7.8	chr18	52790112	52792754	(27580531)	C	HUERS-P3b-int	LTR/ERV1	(7)	2901	90	1758952
78	6.2	1.0	0.9	chr18	52792755	52792858	(27580427)	+	(ATTCC)n	Simple_repeat	1	105	(0)	1758954
28122	17.0	7.8	7.8	chr18	52792859	52792933	(27580352)	C	HUERS-P3b-int	LTR/ERV1	(7329)	89	25	1758952
1714	26.6	9.7	9.3	chr18	74617198	74618378	(5754907)	C	L1MC4	LINE/L1	(138)	7904	6719	1790144
12	27.7	3.5	1.7	chr18	76967668	76967725	(3405560)	+	(TGGTGG)n	Simple_repeat	1	60	(0)	1792919
23	20.5	6.2	1.2	chr19	1026576	1026655	(57590961)	+	(CCCGT)n	Simple_repeat	1	85	(0)	1798100
18	22.9	2.3	6.7	chr19	1026656	1026661	(57590955)	+	(GCCC)n	Simple_repeat	2	89	(0)	1798101
11	14.8	4.9	4.7	chr19	1261060	1261100	(57356516)	+	(AGCGCGG)n	Simple_repeat	1	43	(0)	1798477
385	29.2	6.2	3.4	chr19	1261340	1261573	(57356043)	C	L2c	LINE/L2	(214)	3173	2933	1798478
149	38.0	0.9	2.7	chr19	2336111	2336981	(56280635)	+	(TG)n	Simple_repeat	1	879	(0)	1800580
350	29.3	2.4	0.8	chr19	2782738	2782861	(55834755)	C	MIRc	SINE/MIR	(97)	171	46	1801652
16	20.4	5.0	3.2	chr19	3224615	3224674	(55392942)	+	G-rich	Low_complexity	1	63	(0)	1802678
211	39.3	3.9	0.0	chr19	3434802	3434923	(55182693)	+	MIR3	SINE/MIR	38	164	(44)	1803276
12	15.4	0.0	9.1	chr19	3585303	3585330	(55032286)	+	(CTGTCC)n	Simple_repeat	2	28	(0)	1803593
14	23.4	2.1	2.1	chr19	3585518	3585564	(55032052)	+	(CGG)n	Simple_repeat	1	48	(0)	1803594
23	19.8	1.4	4.3	chr19	3585638	3585706	(55031910)	+	(CCCCGC)n	Simple_repeat	1	70	(0)	1803595
44	27.9	4.7	2.9	chr19	3761262	3761493	(54856123)	+	(CCCCAGA)n	Simple_repeat	1	243	(0)	1803978
337	38.0	1.4	0.0	chr19	4035374	4035515	(54582101)	+	MIRb	SINE/MIR	21	164	(104)	1804591
2295	10.8	0.3	0.0	chr19	4790741	4791047	(53826569)	+	AluSq2	SINE/Alu	1	308	(5)	1806481
19	28.1	3.0	3.9	chr19	4791064	4791164	(53826452)	+	A-rich	Low_complexity	1	104	(0)	1806482
63	11.1	0.0	0.0	chr19	5743635	5743731	(52873885)	+	(TCTCTC)n	Simple_repeat	1	97	(0)	1808721
2211	10.1	0.0	0.0	chr19	5743978	5744275	(52873341)	C	AluSx1	SINE/Alu	(10)	302	5	1808722
13	10.7	3.1	3.0	chr19	5804953	5804984	(52812632)	+	(GGCGG)n	Simple_repeat	1	33	(0)	1808888
12	13.5	7.1	6.7	chr19	5827828	5827883	(52789733)	+	(GCGGCG)n	Simple_repeat	1	60	(0)	1808950
15	17.1	2.4	2.4	chr19	8343231	8343271	(50274345)	+	(CCGCGC)n	Simple_repeat	1	42	(0)	1815070
2246	11.9	0.0	1.3	chr19	9907722	9908031	(48709585)	+	AluSz	SINE/Alu	1	306	(6)	1818413
408	27.1	2.0	0.0	chr19	9908037	9908180	(48709436)	+	L2	LINE/L2	2876	3022	(397)	1818414
1499	14.2	2.2	2.6	chr19	9908181	9908294	(48709322)	C	AluJr	SINE/Alu	(68)	244	131	1818415
325	22.4	4.8	11.7	chr19	11584089	11584310	(47033306)	C	L2	LINE/L2	(407)	3012	2807	1822720
2157	8.1	0.7	1.0	chr19	11584420	11584715	(47032901)	+	AluSq2	SINE/Alu	1	295	(18)	1822721
14	12.7	0.0	0.0	chr19	12835563	12835588	(45782028)	+	(CCAC)n	Simple_repeat	1	26	(0)	1825328
20	25.1	4.0	2.6	chr19	12995102	12995175	(45622441)	+	(TG)n	Simple_repeat	1	77	(0)	1825727
23	19.2	0.0	3.4	chr19	12995313	12995320	(45622296)	+	(GCGTGT)n	Simple_repeat	1	57	(0)	1825728
29	16.2	0.0	0.0	chr19	12995321	12995369	(45622247)	+	(GT)n	Simple_repeat	1	49	(0)	1825729
29	17.1	1.4	2.9	chr19	12995372	12995440	(45622176)	+	(CCGC)n	Simple_repeat	1	70	(0)	1825730
207	23.6	9.5	0.7	chr19	14432291	14432371	(44185245)	C	MIRc	SINE/MIR	(117)	151	51	1829492
300	35.8	6.2	0.7	chr19	15256083	15256220	(43361396)	C	L1M5	LINE/L1	(2914)	3232	3087	1831472
321	36.2	1.0	1.4	chr19	16068476	16068823	(42548793)	+	(TG)n	Simple_repeat	1	350	(0)	1833047
321	36.2	1.0	1.4	chr19	16069214	16069831	(42547785)	+	(TG)n	Simple_repeat	1	617	(0)	1833048
19	18.4	4.1	0.0	chr19	16076233	16076281	(42541335)	+	GA-rich	Low_complexity	1	51	(0)	1833070
13	25.8	2.2	0.0	chr19	16076660	16076705	(42540911)	+	(AGCGCG)n	Simple_repeat	1	47	(0)	1833071
14	11.7	0.0	3.3	chr19	16572409	16572445	(42045171)	+	(GCGGG)n	Simple_repeat	1	35	(0)	1834225
24	13.3	0.0	0.0	chr19	18280986	18281026	(40336590)	+	(CGG)n	Simple_repeat	1	41	(0)	1838528
416	31.3	6.9	1.8	chr19	19062989	19063154	(39554462)	+	MIR	SINE/MIR	40	214	(48)	1840178
21	26.4	2.8	0.0	chr19	19618578	19618649	(38998967)	+	G-rich	Low_complexity	1	74	(0)	1841312
411	23.5	0.0	8.5	chr19	33373111	33373240	(25244376)	+	SVA_E	Retroposon/SVA	194	312	(1070)	1856705
767	12.5	0.0	0.9	chr19	33373142	33373253	(25244363)	C	AluJo	SINE/Alu	(196)	116	6	1856706
2508	16.7	0.7	1.0	chr19	34548863	34549273	(24068343)	C	HERVL74-int	LTR/ERVL	(3556)	2129	1720	1858832
13	24.8	1.6	6.2	chr19	38920425	38920488	(19697128)	+	GA-rich	Low_complexity	1	65	(0)	1867753
897	6.2	0.8	9.7	chr19	40403960	40404103	(18213513)	C	AluJo	SINE/Alu	(181)	131	1	1870961
33	25.9	5.2	2.5	chr19	40614100	40614253	(18003363)	+	(CTCCT)n	Simple_repeat	1	162	(0)	1871515
28	8.6	0.0	0.0	chr19	42387652	42387689	(16229927)	+	(T)n	Simple_repeat	1	38	(0)	1875173
1150	17.0	9.9	0.0	chr19	43892678	43892960	(14724656)	C	L1MC4a	LINE/L1	(2)	7880	7567	1877867
1152	23.2	8.0	4.3	chr19	43892963	43893336	(14724280)	C	MLT1E1A	LTR/ERVL-MaLR	(0)	680	292	1877868
1396	15.6	5.8	2.9	chr19	43893406	43893538	(14724078)	C	L1PREC2	LINE/L1	(691)	5621	5493	1877869
193	27.3	0.0	0.0	chr19	45405400	45405443	(13212173)	+	MIR3	SINE/MIR	111	154	(54)	1881219
191	29.2	2.0	0.0	chr19	45439234	45439281	(13178335)	+	L3	LINE/CR1	3945	3993	(106)	1881318
259	26.8	2.7	0.0	chr19	45439316	45439386	(13178230)	+	MIR3	SINE/MIR	97	169	(39)	1881319
26	11.9	0.0	6.3	chr19	45439387	45439415	(13178201)	+	(AAT)n	Simple_repeat	1	28	(0)	1881320
827	14.2	0.0	0.8	chr19	45439416	45439542	(13178074)	+	FLAM_C	SINE/Alu	1	126	(17)	1881321
26	11.9	0.0	6.3	chr19	45439543	45439575	(13178041)	+	(AAT)n	Simple_repeat	2	31	(0)	1881322
13	28.2	0.0	6.8	chr19	45440176	45440248	(13177368)	+	(CCCCATC)n	Simple_repeat	1	73	(0)	1881323
623	28.8	15.0	0.5	chr19	45682849	45683263	(12934353)	C	L2a	LINE/L2	(601)	2818	2333	1881987
2360	10.1	0.0	1.3	chr19	45863559	45863874	(12753742)	C	AluSz	SINE/Alu	(0)	312	1	1882443
14	10.9	4.3	8.2	chr19	45901755	45901801	(12715815)	+	(CCG)n	Simple_repeat	1	49	(0)	1882529
15	10.9	4.7	4.4	chr19	45901918	45901960	(12715656)	+	G-rich	Low_complexity	1	45	(0)	1882530
13	3.8	6.9	3.2	chr19	46639025	46639053	(11978563)	+	(GGACA)n	Simple_repeat	1	31	(0)	1884164
387	22.3	8.8	3.7	chr19	51013206	51013312	(7604304)	+	L2b	LINE/L2	3258	3370	(5)	1894821
15	10.4	3.0	2.9	chr19	55675287	55675319	(2942297)	+	(GGC)n	Simple_repeat	1	34	(0)	1904272
12	25.8	0.0	0.0	chr19	55675311	55675347	(2942269)	+	(GCGT)n	Simple_repeat	1	37	(0)	1904273
17	25.8	2.9	6.5	chr19	55675563	55675587	(2942029)	+	(CCTGTG)n	Simple_repeat	1	49	(59)	1904274
12	9.2	0.0	4.0	chr19	58347643	58347667	(269949)	+	(GGGC)n	Simple_repeat	1	25	(0)	1909381
14	35.6	0.0	0.0	chr19	58347672	58347738	(269878)	+	(CCGCGC)n	Simple_repeat	1	67	(0)	1909382
333	29.8	2.0	1.4	chr2	2852315	2853444	(239340085)	+	(CA)n	Simple_repeat	1	1153	(0)	1913739
410	18.2	4.9	0.5	chr2	3971303	3972257	(238221272)	+	(GT)n	Simple_repeat	1	1002	(0)	1915157
347	30.3	7.9	10.0	chr2	8555817	8556076	(233637453)	+	L1M2	LINE/L1	4971	5224	(919)	1921556
31	2.8	2.7	0.0	chr2	9556318	9556354	(232637175)	+	(CCCCGAG)n	Simple_repeat	1	38	(0)	1923168
25	15.2	2.0	0.0	chr2	9951320	9951370	(232242159)	+	G-rich	Low_complexity	1	52	(0)	1923943
19	19.3	0.0	2.0	chr2	9951508	9951556	(232241973)	+	(CGCCCCC)n	Simple_repeat	1	49	(0)	1923944
18	25.3	1.9	0.0	chr2	9951716	9951767	(232241762)	+	(CCG)n	Simple_repeat	1	53	(0)	1923945
14	17.7	2.5	2.4	chr2	9951940	9951979	(232241550)	+	G-rich	Low_complexity	1	41	(0)	1923946
376	31.2	14.4	2.4	chr2	15343160	15343488	(226850041)	+	L1MEi	LINE/L1	368	742	(1470)	1932565
412	29.3	16.2	4.5	chr2	24617348	24617726	(217575803)	+	L2	LINE/L2	2132	2563	(856)	1946450
185	34.4	3.1	3.9	chr2	27264756	27264885	(214928644)	C	MIR1_Amn	SINE/MIR	(75)	155	27	1951464
22	23.4	1.6	1.6	chr2	32357248	32357347	(209836182)	+	(GGC)n	Simple_repeat	1	100	(0)	1960156
9226	11.2	10.2	1.7	chr2	32885682	32887122	(209306407)	C	LTR12C	LTR/ERV1	(1)	1578	3	1961130
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
21	13.4	4.9	0.0	chr2	35665296	35665336	(206528193)	+	GA-rich	Low_complexity	1	43	(0)	1965075
523	22.6	7.0	2.0	chr2	35665559	35665707	(206527822)	+	L2a	LINE/L2	3270	3426	(0)	1965076
26	10.6	7.9	1.5	chr2	42492753	42492815	(199700714)	+	(GGACG)n	Simple_repeat	1	68	(0)	1975680
12	15.3	2.4	7.0	chr2	42493992	42494033	(199699496)	+	(CGG)n	Simple_repeat	1	43	(0)	1975681
270	27.7	1.5	0.0	chr2	43150112	43150176	(199043353)	+	L2b	LINE/L2	3303	3368	(7)	1976984
507	33.3	1.0	6.2	chr2	43150175	43150385	(199043144)	+	MIRb	SINE/MIR	17	216	(52)	1976985
204	28.6	4.9	2.5	chr2	46404244	46404322	(195789207)	C	MIR3	SINE/MIR	(13)	195	115	1982196
15	19.9	0.0	0.0	chr2	46404660	46404694	(195788835)	+	(CATT)n	Simple_repeat	1	35	(0)	1982197
19	24.9	1.4	2.8	chr2	46699184	46699253	(195494276)	+	G-rich	Low_complexity	1	71	(0)	1982668
2439	6.5	0.0	0.3	chr2	55223800	55224093	(186969436)	C	AluSg	SINE/Alu	(16)	294	2	1995514
700	26.6	30.4	0.3	chr2	58640053	58640399	(183553130)	+	LTR16B2	LTR/ERVL	3	463	(0)	2000077
1352	17.3	0.0	0.0	chr2	61814505	61814706	(180378823)	+	AluJb	SINE/Alu	73	274	(38)	2005254
491	33.7	14.0	4.8	chr2	67405857	67406412	(174787117)	+	L2a	LINE/L2	2563	3178	(248)	2014034
16	26.8	4.8	0.0	chr2	67406673	67406735	(174786794)	+	(GTAT)n	Simple_repeat	1	66	(0)	2014035
13	25.4	0.0	4.0	chr2	69386870	69386919	(172806610)	+	(CCCCGC)n	Simple_repeat	1	50	(0)	2016982
13	26.3	1.7	3.4	chr2	69387003	69387060	(172806469)	+	(CGGCCCC)n	Simple_repeat	1	59	(0)	2016983
16	18.9	2.9	7.0	chr2	69387229	69387297	(172806232)	+	(CCGCCGC)n	Simple_repeat	1	71	(0)	2016984
464	29.6	18.4	1.5	chr2	70067132	70067464	(172126065)	C	L2a	LINE/L2	(732)	2687	2286	2018291
673	29.3	7.4	2.8	chr2	70067466	70067900	(172125629)	+	L1ME3G	LINE/L1	468	924	(0)	2018300
218	25.7	4.2	8.9	chr2	71276168	71276291	(170917238)	+	L2c	LINE/L2	3250	3367	(20)	2020406
765	31.1	15.6	8.6	chr2	74751881	74752629	(167440900)	+	L1M6	LINE/L1	43	870	(5626)	2025895
955	21.5	5.7	0.1	chr2	74752644	74752873	(167440656)	+	MIR	SINE/MIR	3	250	(12)	2025897
251	30.0	3.6	0.0	chr2	83037938	83038017	(159155512)	C	MIR	SINE/MIR	(105)	157	75	2037106
597	21.6	3.4	12.7	chr2	83038292	83038519	(159155010)	+	MER3	DNA/hAT-Charlie	3	208	(1)	2037107
598	25.0	5.7	2.4	chr2	84635009	84635213	(157558316)	C	MamRep38	DNA/hAT	(80)	215	4	2039247
193	17.1	0.0	5.4	chr2	85354208	85354244	(156839285)	C	MIR3	SINE/MIR	(59)	149	115	2040584
181	32.4	2.8	4.5	chr2	85354217	85354326	(156839203)	C	MIR1_Amn	SINE/MIR	(83)	147	40	2040585
17	12.3	2.7	2.6	chr2	85354466	85354502	(156839027)	+	(CAG)n	Simple_repeat	1	38	(0)	2040586
12	7.4	10.3	0.0	chr2	85611846	85611874	(156581655)	+	(GGC)n	Simple_repeat	1	32	(0)	2041125
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
21	8.8	2.8	0.0	chr2	91478098	91478133	(150715396)	+	(CCG)n	Simple_repeat	1	37	(0)	2048369
21055	11.6	1.6	1.0	chr2	98963168	98967714	(143225815)	C	L1PREC2	LINE/L1	(1486)	5280	701	2055731
759	27.8	12.8	5.7	chr2	99533512	99534213	(142659316)	+	HAL1ME	LINE/L1	892	1650	(815)	2056618
14	18.3	2.7	0.0	chr2	102736724	102736760	(139456769)	+	(TCCTGTC)n	Simple_repeat	1	38	(0)	2061466
183	21.5	4.4	1.5	chr2	107133408	107133929	(135059600)	+	(GT)n	Simple_repeat	1	545	(0)	2067469
22	16.9	6.4	3.6	chr2	113157294	113157308	(129036221)	+	(CCCG)n	Simple_repeat	1	42	(41)	2076329
15	17.3	2.0	5.8	chr2	113157309	113157359	(129036170)	+	(CCCGG)n	Simple_repeat	1	52	(0)	2076330
22	16.9	6.4	3.6	chr2	113157360	113157371	(129036158)	+	(CCCG)n	Simple_repeat	43	83	(0)	2076329
1989	17.2	3.3	7.1	chr2	113689190	113689595	(128503934)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	2077150
37	38.0	1.4	1.4	chr2	120829026	120829245	(121364284)	+	(CACACA)n	Simple_repeat	1	223	(0)	2087622
23513	3.2	0.2	1.7	chr2	131613929	131617597	(110575932)	C	L1PA3	LINE/L1	(0)	6155	2545	2103544
51	0.0	0.0	0.0	chr2	135036638	135036681	(107156848)	+	(TG)n	Simple_repeat	1	44	(0)	2108337
267	29.8	2.4	3.9	chr2	135036682	135036703	(107156826)	C	L2c	LINE/L2	(1030)	2389	2368	2108328
211	30.8	5.2	1.1	chr2	135036719	135036810	(107156719)	C	L2c	LINE/L2	(1183)	2236	2141	2108328
232	19.6	3.5	16.4	chr2	135036812	135036945	(107156584)	C	L2-3_Crp	LINE/L2	(1233)	863	748	2108338
1706	29.5	10.1	2.4	chr2	138812051	138812983	(103380546)	C	HAL1	LINE/L1	(1494)	1013	1	2113984
8054	21.0	2.1	0.7	chr2	142397691	142399317	(99794212)	+	MSTB-int	LTR/ERVL-MaLR	1	1651	(0)	2118748
572	26.2	8.8	3.3	chr2	147840190	147840254	(94353275)	C	MER5C	DNA/hAT-Charlie	(48)	265	199	2125785
1877	16.7	0.3	2.6	chr2	147840255	147840566	(94352963)	+	AluJb	SINE/Alu	1	305	(7)	2125786
4108	11.3	0.2	0.5	chr2	159864125	159864754	(82328775)	C	L1M2	LINE/L1	(878)	5265	4638	2142275
67	0.0	0.0	0.0	chr2	161278891	161278950	(80914579)	+	(TCCT)n	Simple_repeat	1	60	(0)	2144204
328	24.2	0.0	0.0	chr2	161279238	161279303	(80914226)	C	MER47C	DNA/TcMar-Tigger	(31)	66	1	2144205
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
706	22.5	10.3	2.1	chr2	161999814	161999999	(80193530)	C	MIRb	SINE/MIR	(0)	268	66	2145098
10982	14.6	2.6	4.1	chr2	164854177	164856122	(77337407)	C	Tigger1	DNA/TcMar-Tigger	(499)	1919	5	2148886
2935	21.6	1.7	1.7	chr2	167147256	167147848	(75045681)	+	MER77	LTR/ERVL	1	593	(11)	2151855
364	29.1	7.4	2.0	chr2	167147852	167148054	(75045475)	+	L1MEd	LINE/L1	1784	1998	(5105)	2151853
16	11.2	0.0	3.2	chr2	169827510	169827540	(72365989)	+	(GGC)n	Simple_repeat	1	31	(0)	2155681
27	20.3	1.1	6.5	chr2	169827686	169827776	(72365753)	+	(GCG)n	Simple_repeat	1	92	(0)	2155682
718	27.6	9.5	3.5	chr2	170325595	170325988	(71867541)	+	LTR79	LTR/ERVL	108	527	(0)	2156451
241	37.1	0.0	0.0	chr2	172109859	172109955	(70083574)	+	MIR	SINE/MIR	81	177	(85)	2159606
1697	26.6	6.5	2.3	chr2	172720777	172721331	(69472198)	C	L1ME1	LINE/L1	(5827)	596	17	2160585
739	29.2	10.0	5.8	chr2	172757281	172757815	(69435714)	C	Tigger15a	DNA/TcMar-Tigger	(155)	560	1	2160641
2666	25.6	10.9	7.2	chr2	174167881	174168753	(68024776)	+	L1ME1	LINE/L1	242	1124	(5291)	2162814
14	30.7	0.0	0.0	chr2	174336420	174336467	(67857062)	+	(CGG)n	Simple_repeat	1	48	(0)	2163102
18	31.8	0.0	0.0	chr2	174336898	174336959	(67856570)	+	(CGC)n	Simple_repeat	1	62	(0)	2163103
13	18.5	2.6	2.5	chr2	174682243	174682281	(67511248)	+	G-rich	Low_complexity	1	40	(0)	2163676
12	12.6	2.5	7.3	chr2	174682577	174682616	(67510913)	+	(GCGCCC)n	Simple_repeat	1	41	(0)	2163677
8489	9.9	1.7	2.0	chr2	179546337	179548246	(62645283)	C	L1MA3	LINE/L1	(249)	6056	4126	2170315
203	38.1	6.0	2.9	chr2	186047562	186047769	(56145760)	C	L2b	LINE/L2	(560)	2859	2645	2178543
2207	17.0	3.7	1.2	chr2	186047774	186048190	(56145339)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	2178549
1705	19.2	1.6	1.6	chr2	189419510	189419821	(52773708)	+	AluJr4	SINE/Alu	1	312	(0)	2182810
1861	19.6	0.0	1.0	chr2	189747054	189747359	(52446170)	+	AluJb	SINE/Alu	1	303	(9)	2183307
302	35.9	2.0	6.2	chr2	196068201	196068411	(46125118)	C	MIRc	SINE/MIR	(63)	205	4	2191849
13	13.2	6.7	4.2	chr2	196593438	196593482	(45600047)	+	(CCGCGGTG)n	Simple_repeat	1	48	(0)	2192634
13	25.0	2.0	2.0	chr2	196593698	196593746	(45599783)	+	(GGCTGA)n	Simple_repeat	1	50	(0)	2192635
181	31.6	6.9	0.0	chr2	196593880	196593974	(45599555)	+	MIRc	SINE/MIR	121	222	(46)	2192636
22	34.5	2.7	1.8	chr2	198303906	198304016	(43889513)	+	(AT)n	Simple_repeat	1	114	(0)	2195365
19118	15.9	2.2	1.6	chr2	200054406	200061787	(42131742)	+	L1PA15	LINE/L1	605	8141	(19)	2197755
406	33.5	12.6	3.0	chr2	201828026	201828425	(40365104)	C	L2c	LINE/L2	(816)	2603	2160	2200655
228	22.0	1.7	4.8	chr2	201828458	201828519	(40365010)	C	L2-1_AMi	LINE/L2	(1020)	215	156	2200665
455	29.6	13.6	3.2	chr2	201911953	201912322	(40281207)	C	LTR16	LTR/ERVL	(13)	425	22	2200827
622	30.2	0.0	5.3	chr2	201912413	201912639	(40280890)	C	MIRb	SINE/MIR	(6)	262	48	2200828
13	26.8	1.6	4.7	chr2	205682309	205682371	(36511158)	+	(GCCGC)n	Simple_repeat	1	64	(0)	2207282
21	19.8	0.0	0.0	chr2	205682634	205682679	(36510850)	+	(CAG)n	Simple_repeat	1	46	(0)	2207283
16	8.7	0.0	0.0	chr2	205682922	205682946	(36510583)	+	(ATT)n	Simple_repeat	1	25	(0)	2207284
218	36.6	8.0	1.7	chr2	214750375	214750549	(27442980)	+	L2c	LINE/L2	2911	3097	(290)	2220027
1199	22.5	4.3	11.5	chr2	215564445	215564484	(26629045)	C	MLT2C1	LTR/ERVL	(0)	397	359	2221293
34	3.0	0.0	0.0	chr2	215564485	215564518	(26629011)	+	(TG)n	Simple_repeat	1	34	(0)	2221294
1199	22.5	4.3	11.5	chr2	215564519	215564706	(26628823)	C	MLT2C1	LTR/ERVL	(39)	358	184	2221293
653	19.1	2.2	0.0	chr2	215564707	215564837	(26628692)	+	L1PA17	LINE/L1	6027	6160	(6)	2221295
1199	22.5	4.3	11.5	chr2	215564838	215565034	(26628495)	C	MLT2C1	LTR/ERVL	(214)	183	3	2221293
1955	10.6	0.4	0.0	chr2	222856619	222856854	(19336675)	+	AluSg	SINE/Alu	1	237	(73)	2233356
13552	12.3	2.0	1.3	chr2	222856869	222858449	(19335080)	+	Tigger1	DNA/TcMar-Tigger	343	1949	(469)	2233357
333	32.7	2.8	4.2	chr2	223837000	223837216	(18356313)	+	L2a	LINE/L2	3213	3426	(0)	2234957
12	20.9	0.0	7.8	chr2	223837325	223837375	(18356154)	+	(GGCCC)n	Simple_repeat	1	51	(0)	2234958
49	20.2	3.3	5.9	chr2	223837625	223837804	(18355725)	+	(CCT)n	Simple_repeat	1	186	(0)	2234959
2106	28.1	11.7	3.4	chr2	224164267	224165174	(18028355)	+	L2	LINE/L2	57	1049	(2370)	2235484
1589	18.4	9.2	1.4	chr2	229424408	229424766	(12768763)	C	MLT1B	LTR/ERVL-MaLR	(0)	390	1	2243513
189	22.3	9.4	8.0	chr2	231198203	231198287	(10995242)	+	MIRb	SINE/MIR	92	179	(89)	2246401
197	31.4	13.2	0.8	chr2	231198304	231198422	(10995107)	+	L2b	LINE/L2	3239	3374	(1)	2246402
18	19.3	2.4	9.2	chr2	238158997	238159081	(4034448)	+	(CCG)n	Simple_repeat	1	87	(0)	2257432
12	15.9	5.7	0.0	chr2	238159212	238159246	(4034283)	+	(CGCCCG)n	Simple_repeat	1	37	(0)	2257433
520	19.8	3.1	2.0	chr2	240147446	240148287	(2045242)	+	(TG)n	Simple_repeat	439	1328	(0)	2259744
447	27.7	14.4	5.1	chr2	240148295	240148727	(2044802)	C	LTR16E2	LTR/ERVL	(52)	486	7	2259746
203	32.8	0.8	2.3	chr2	240961321	240962103	(1231426)	+	(CA)n	Simple_repeat	1	789	(0)	2260545
12920	12.4	9.6	2.1	chr2	241282505	241283471	(910058)	+	Tigger1	DNA/TcMar-Tigger	2	1039	(1379)	2260914
22	22.5	6.1	2.9	chr2	241734481	241734578	(458951)	+	G-rich	Low_complexity	1	104	(0)	2261641
14	18.4	2.7	0.0	chr20	325309	325345	(64118822)	+	(CCGCC)n	Simple_repeat	1	38	(0)	2262663
12	21.8	2.7	0.0	chr20	325406	325442	(64118725)	+	(GCCCGA)n	Simple_repeat	1	38	(0)	2262664
14	14.0	4.9	2.3	chr20	325566	325606	(64118561)	+	(GCGGCGGA)n	Simple_repeat	1	43	(0)	2262665
14	21.9	2.3	2.2	chr20	325829	325872	(64118295)	+	(GCC)n	Simple_repeat	1	45	(0)	2262666
2229	3.4	0.0	4.4	chr20	727636	727930	(63716237)	C	AluSp	SINE/Alu	(30)	283	2	2263617
25	18.7	0.0	4.5	chr20	2693162	2693227	(61750940)	+	G-rich	Low_complexity	1	66	(0)	2267441
12	16.6	4.5	4.3	chr20	2693353	2693396	(61750771)	+	(CCGC)n	Simple_repeat	1	46	(0)	2267442
20	17.2	5.6	4.0	chr20	2840134	2840204	(61603963)	+	(CCGCG)n	Simple_repeat	1	75	(0)	2267676
276	11.7	1.6	6.2	chr20	3238836	3238899	(61205268)	C	MER45A	DNA/hAT-Tip100	(56)	122	62	2268485
11	25.0	0.0	4.3	chr20	3239890	3239935	(61204232)	+	(CCCCTTT)n	Simple_repeat	1	46	(0)	2268486
15	10.4	0.0	5.7	chr20	3239999	3240033	(61204134)	+	(GCGCGT)n	Simple_repeat	1	35	(0)	2268487
13	23.8	2.2	2.1	chr20	3820503	3820548	(60623619)	+	(GCGC)n	Simple_repeat	1	47	(0)	2269563
26	20.3	4.4	5.9	chr20	5610705	5610818	(58833349)	+	(CCGGC)n	Simple_repeat	1	119	(0)	2272845
13	15.2	0.0	3.2	chr20	5611040	5611070	(58833097)	+	G-rich	Low_complexity	1	31	(0)	2272846
13225	17.0	4.7	2.7	chr20	12104138	12105276	(52338891)	+	L1MB1	LINE/L1	2281	3476	(2664)	2283013
16	26.8	4.7	3.3	chr20	17520678	17520763	(46923404)	+	(TCC)n	Simple_repeat	1	90	(0)	2291019
1471	19.0	4.3	2.2	chr20	17530408	17530724	(46913443)	+	L1ME2	LINE/L1	5841	6164	(0)	2291043
14	4.9	0.0	0.0	chr20	17681710	17681730	(46762437)	+	(GGGA)n	Simple_repeat	1	21	(0)	2291260
19	12.9	2.3	2.2	chr20	17681880	17681924	(46762243)	+	(GGCGGCG)n	Simple_repeat	1	45	(0)	2291261
246	26.8	10.7	6.6	chr20	20306878	20307073	(44137094)	+	MamRep564	Unknown	104	308	(49)	2295461
745	24.3	14.5	2.4	chr20	22720753	22721085	(41723082)	C	L1ME3	LINE/L1	(219)	5943	5564	2298775
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
29	0.0	0.0	0.0	chr20	34709161	34709185	(29734982)	+	(GT)n	Simple_repeat	1	25	(0)	2313685
16	18.8	0.0	4.3	chr20	34709247	34709303	(29734864)	+	(CCCCGC)n	Simple_repeat	1	54	(0)	2313686
264	26.1	1.4	1.4	chr20	36858116	36858185	(27585982)	+	MIRb	SINE/MIR	14	83	(185)	2318630
252	24.3	1.3	5.1	chr20	36858186	36858263	(27585904)	+	MIR3	SINE/MIR	116	190	(18)	2318631
47	0.0	0.0	0.0	chr20	36858312	36858351	(27585816)	+	(AC)n	Simple_repeat	1	40	(0)	2318632
18	23.8	0.0	2.0	chr20	38926649	38926699	(25517468)	+	(GCG)n	Simple_repeat	1	51	(0)	2323167
43	34.0	2.9	2.4	chr20	40811462	40811702	(23632465)	+	(TG)n	Simple_repeat	1	248	(0)	2326482
250	25.6	6.3	8.9	chr20	41148612	41148757	(23295410)	C	L2c	LINE/L2	(31)	3356	3215	2327107
577	25.7	3.9	3.4	chr20	41148848	41149024	(23295143)	+	MIRb	SINE/MIR	27	204	(64)	2327108
1842	24.7	8.5	3.4	chr20	43157742	43158478	(21285689)	C	L2a	LINE/L2	(337)	3082	2305	2330534
232	28.2	9.0	0.0	chr20	46013858	46013928	(18430239)	C	MER91A	DNA/hAT-Tip100	(3)	193	116	2336782
222	33.6	2.7	1.8	chr20	46014600	46014711	(18429456)	C	MIRc	SINE/MIR	(147)	121	9	2336783
32	17.6	0.0	0.0	chr20	46174836	46174899	(18269268)	+	(GCCCCC)n	Simple_repeat	1	64	(0)	2337099
1712	17.7	2.4	3.3	chr20	46180738	46180926	(18263241)	C	AluJr4	SINE/Alu	(16)	296	118	2337111
46	0.0	0.0	0.0	chr20	46180927	46180965	(18263202)	+	(TG)n	Simple_repeat	1	39	(0)	2337112
1712	17.7	2.4	3.3	chr20	46180966	46181075	(18263092)	C	AluJr4	SINE/Alu	(195)	117	1	2337111
549	33.3	9.0	10.6	chr20	46181076	46181571	(18262596)	C	L2b	LINE/L2	(5)	3370	2881	2337113
482	22.5	11.2	2.5	chr20	48965262	48965457	(15478710)	+	L4_C_Mam	LINE/RTE-X	4723	4937	(201)	2343309
1286	27.9	10.8	3.9	chr20	49618440	49619067	(14825100)	+	L2a	LINE/L2	2748	3426	(0)	2344906
528	11.4	1.1	3.7	chr20	49619068	49620028	(14824139)	+	(GGAT)n	Simple_repeat	1	972	(0)	2344908
68	29.3	6.0	1.4	chr20	50259613	50259961	(14184206)	+	(TC)n	Simple_repeat	1	370	(0)	2346489
19	9.7	0.0	7.7	chr20	53538696	53538734	(10905433)	+	(TG)n	Simple_repeat	1	39	(0)	2353698
716	13.6	2.6	5.8	chr20	53538916	53538995	(10905172)	C	MER96B	DNA/hAT-Tip100	(24)	393	316	2353699
1551	17.0	5.0	3.6	chr20	53538996	53539272	(10904895)	C	AluJb	SINE/Alu	(14)	298	18	2353700
52	11.5	0.0	0.0	chr20	53748948	53749032	(10695135)	+	(GT)n	Simple_repeat	1	85	(0)	2354252
191	22.9	4.0	0.0	chr20	53749124	53749171	(10694996)	+	MIRb	SINE/MIR	51	100	(168)	2354253
233	25.5	17.9	0.9	chr20	53749277	53749387	(10694780)	+	MIRb	SINE/MIR	134	267	(1)	2354253
3196	25.1	5.6	2.0	chr20	56547709	56548757	(7895410)	C	L1MC4a	LINE/L1	(340)	7542	6454	2359241
427	31.1	2.2	10.0	chr20	57121330	57121444	(7322723)	C	MIR	SINE/MIR	(0)	262	158	2360586
1074	26.5	10.2	5.0	chr20	57121445	57121811	(7322356)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	107	2360587
2041	13.4	0.3	0.0	chr20	57605653	57605936	(6838231)	+	AluSp	SINE/Alu	1	285	(28)	2361473
27	0.0	0.0	0.0	chr20	57605937	57605962	(6838205)	+	(AAAT)n	Simple_repeat	1	26	(0)	2361474
14851	13.7	2.1	4.9	chr20	57605963	57607998	(6836169)	+	Tigger1	DNA/TcMar-Tigger	428	2416	(2)	2361472
1568	25.3	5.3	4.4	chr20	57759829	57760328	(6683839)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	2361749
290	33.9	9.4	0.0	chr20	59054837	59054951	(5389216)	+	L2c	LINE/L2	3255	3381	(6)	2363856
182	26.4	19.6	2.0	chr20	61076024	61076174	(3367993)	+	L2a	LINE/L2	2984	3167	(259)	2366897
16	24.7	0.0	3.6	chr20	63520473	63520528	(923639)	+	G-rich	Low_complexity	1	56	(0)	2369660
10697	8.6	8.4	0.1	chr20	63800379	63801824	(642343)	+	LTR12C	LTR/ERV1	2	1579	(0)	2370048
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
797	22.4	0.5	0.1	chr21	8229975	8230765	(38479218)	+	(TCTC)n	Simple_repeat	2	795	(0)	2373327
446	20.9	0.1	6.5	chr21	8230776	8230919	(38479064)	+	MER39B	LTR/ERV1	298	454	(253)	2373328
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
24	15.5	7.0	0.0	chr21	8401981	8402037	(38307946)	+	(CG)n	Simple_repeat	1	61	(0)	2373511
14	13.3	9.8	0.0	chr21	8402028	8402068	(38307915)	+	(CGTC)n	Simple_repeat	1	45	(0)	2373512
312	38.2	6.5	3.6	chr21	8419786	8420171	(38289812)	C	HAL1	LINE/L1	(1230)	1277	880	2373573
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
25399	0.2	1.5	0.8	chr21	8441146	8441992	(38267991)	+	LSU-rRNA_Hsa	rRNA	1	877	(4158)	2373624
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
334	30.3	5.3	0.0	chr21	9246374	9246462	(37463521)	+	AluYa8	SINE/Alu	185	278	(32)	2374337
436	12.7	0.0	0.0	chr21	9246781	9246835	(37463148)	+	AluYj4	SINE/Alu	225	279	(32)	2374338
404	15.6	1.5	0.0	chr21	9247151	9247214	(37462769)	+	AluYj4	SINE/Alu	224	288	(23)	2374339
74	12.3	0.0	0.0	chr21	9247783	9247915	(37462068)	+	(TGGAA)n	Simple_repeat	1	133	(0)	2374340
378	16.1	3.0	0.2	chr21	9247917	9247990	(37461993)	+	AluJb	SINE/Alu	216	290	(12)	2374341
116	31.8	0.3	0.0	chr21	9567989	9568343	(37141640)	+	(TGATGA)n	Simple_repeat	1	356	(0)	2374566
326	30.2	8.0	5.9	chr21	9568344	9568473	(37141510)	+	L1ME4c	LINE/L1	243	378	(452)	2374567
624	24.4	0.0	0.0	chr21	9568474	9568600	(37141383)	C	FLAM_A	SINE/Alu	(15)	127	1	2374568
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
21	16.7	0.0	2.4	chr21	9819273	9819314	(36890669)	+	(AC)n	Simple_repeat	1	42	(0)	2374898
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
398	8.6	0.2	0.0	chr21	10426491	10427038	(36282945)	+	(GTGGTG)n	Simple_repeat	1	549	(0)	2375540
404	28.3	11.0	2.7	chr21	10427070	10427382	(36282601)	C	L2c	LINE/L2	(213)	3174	2827	2375541
25	15.4	0.0	0.0	chr21	10427515	10427557	(36282426)	+	(CA)n	Simple_repeat	1	43	(0)	2375542
14	22.0	2.4	0.0	chr21	15056271	15056291	(31653692)	+	A-rich	Low_complexity	1	43	(0)	2378610
17	5.0	0.0	0.0	chr21	15056292	15056312	(31653671)	+	(A)n	Simple_repeat	1	21	(0)	2378611
19119	8.6	0.8	1.4	chr21	15950079	15952848	(30757135)	C	L1PA13	LINE/L1	(914)	6667	3914	2379817
12	16.6	0.0	0.0	chr21	17819157	17819183	(28890800)	+	(GTCC)n	Simple_repeat	1	27	(0)	2382241
6123	19.1	7.9	4.2	chr21	19584536	19585709	(27124274)	C	L1MC1	LINE/L1	(155)	6353	5077	2384523
1580	16.4	14.7	2.4	chr21	25250268	25250641	(21459342)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2392232
12	19.1	5.9	3.7	chr21	26170687	26170737	(20539246)	+	(CCG)n	Simple_repeat	1	54	(0)	2393604
2042	22.6	4.7	2.8	chr21	28690269	28690566	(18019417)	+	MLT1E2	LTR/ERVL-MaLR	333	627	(0)	2397109
305	27.2	6.4	7.5	chr21	28690583	28690741	(18019242)	C	L1ME3B	LINE/L1	(107)	6135	5979	2397111
21313	11.2	2.0	0.7	chr21	28834145	28838252	(17871731)	+	L1PB1	LINE/L1	255	4416	(2446)	2397329
4625	15.5	6.6	1.3	chr21	28967197	28968014	(17741969)	+	MER21B	LTR/ERVL	5	868	(0)	2397514
950	18.8	6.9	5.2	chr21	31548789	31548981	(15161002)	C	MER20	DNA/hAT-Charlie	(17)	202	1	2401578
278	25.5	4.8	2.0	chr21	31549046	31549145	(15160838)	+	UCON107	DNA/hAT-Tag1	72	174	(31)	2401580
4443	17.5	4.5	1.1	chr21	31549353	31549841	(15160142)	+	L1MB7	LINE/L1	5174	5665	(519)	2401581
12	11.9	0.0	6.5	chr21	31558175	31558205	(15151778)	+	(GCGCA)n	Simple_repeat	1	31	(0)	2401593
13	8.9	10.5	2.4	chr21	31558695	31558732	(15151251)	+	(CCT)n	Simple_repeat	1	42	(0)	2401594
2035	13.2	3.4	0.3	chr21	32285757	32286045	(14423938)	+	AluSz	SINE/Alu	1	298	(14)	2402958
17	19.1	2.9	3.8	chr21	32286046	32286058	(14423925)	+	GA-rich	Low_complexity	1	23	(47)	2402959
18	6.7	2.9	2.9	chr21	32286059	32286092	(14423891)	+	(AGAAA)n	Simple_repeat	1	35	(0)	2402960
21	13.3	2.4	0.0	chr21	32286084	32286124	(14423859)	+	(AGGC)n	Simple_repeat	1	42	(0)	2402961
17	19.1	2.9	3.8	chr21	32286093	32286116	(14423867)	+	GA-rich	Low_complexity	24	70	(0)	2402959
420	11.7	3.2	0.0	chr21	32286130	32286189	(14423794)	+	AluJo	SINE/Alu	240	301	(11)	2402962
16	10.3	2.9	2.9	chr21	32286192	32286225	(14423758)	+	GA-rich	Low_complexity	1	35	(0)	2402963
801	28.1	9.9	1.0	chr21	32286226	32286621	(14423362)	+	HAL1ME	LINE/L1	1301	1735	(730)	2402957
190	41.8	3.8	2.5	chr21	32423938	32424094	(14285889)	C	X9_LINE	LINE/L1	(99)	837	679	2403172
397	9.7	1.6	1.6	chr21	32492029	32492091	(14217892)	C	MER45A	DNA/hAT-Tip100	(17)	161	99	2403311
165	32.4	0.0	2.4	chr21	32533064	32533644	(14176339)	+	(TG)n	Simple_repeat	1	581	(0)	2403387
627	25.8	8.4	3.6	chr21	32533770	32533994	(14175989)	+	MIRb	SINE/MIR	29	265	(3)	2403388
534	35.8	11.1	4.8	chr21	34225384	34225718	(12484265)	C	L2	LINE/L2	(1899)	1520	1168	2406303
2128	15.2	3.3	0.3	chr21	34225719	34226073	(12483910)	+	MER47A	DNA/TcMar-Tigger	1	366	(0)	2406304
891	15.5	7.7	1.8	chr21	35442144	35442314	(11267669)	C	MER5A	DNA/hAT-Charlie	(5)	184	3	2408126
2224	11.0	3.4	0.4	chr21	39284492	39284967	(7425016)	C	L1M2	LINE/L1	(711)	5589	5104	2414274
3123	18.8	3.3	2.4	chr21	39284968	39285623	(7424360)	+	L1MA6	LINE/L1	5639	6300	(0)	2414275
263	33.9	8.5	3.0	chr21	40127567	40127767	(6582216)	+	L2c	LINE/L2	2357	2569	(850)	2415594
463	28.6	7.7	8.8	chr21	40127829	40128250	(6581733)	+	L2c	LINE/L2	2956	3372	(15)	2415594
11	15.7	6.5	4.1	chr21	41168695	41168740	(5541243)	+	G-rich	Low_complexity	1	49	(0)	2417065
982	28.7	8.7	1.9	chr21	45086355	45086827	(1623156)	C	L1MB7	LINE/L1	(37)	6147	5640	2422510
729	29.0	7.8	1.4	chr21	45086828	45087184	(1622799)	+	Charlie25	DNA/hAT-Charlie	1591	1972	(552)	2422511
14	15.7	2.1	6.1	chr21	45642749	45642796	(1067187)	+	G-rich	Low_complexity	1	49	(0)	2423030
2123	11.6	0.3	0.0	chr21	46340898	46341182	(368801)	C	AluSz	SINE/Alu	(26)	286	1	2423847
15	13.9	0.0	0.0	chr21	46341473	46341507	(368476)	+	(T)n	Simple_repeat	1	35	(0)	2423848
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
2046	15.2	0.0	0.0	chr22	11877779	11878081	(38940387)	C	AluSx	SINE/Alu	(4)	308	6	2425483
1124	22.8	3.2	0.8	chr22	11900617	11900862	(38917606)	C	AluJr	SINE/Alu	(48)	264	13	2425511
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
2208	15.8	6.4	5.0	chr22	19627986	19628412	(31190056)	C	L1MB3	LINE/L1	(43)	6140	5698	2432339
1135	10.9	5.4	2.0	chr22	19628463	19628659	(31189809)	C	L1MA3	LINE/L1	(359)	5946	5743	2432341
272	14.3	0.0	0.0	chr22	19628661	19628702	(31189766)	C	L1MA7	LINE/L1	(190)	6101	6060	2432342
1088	14.4	4.9	6.7	chr22	19628702	19628879	(31189589)	C	L1MA4	LINE/L1	(0)	6300	6116	2432343
197	35.7	13.0	3.2	chr22	21656670	21657167	(29161301)	C	L2	LINE/L2	(729)	2690	2137	2435624
33	28.0	2.7	3.3	chr22	21867413	21867558	(28950910)	+	(CCG)n	Simple_repeat	1	150	(0)	2436079
12	9.8	0.0	0.0	chr22	21867625	21867646	(28950822)	+	(TGCC)n	Simple_repeat	1	22	(0)	2436080
19	24.2	1.7	1.6	chr22	21867648	21867707	(28950761)	+	G-rich	Low_complexity	1	61	(0)	2436081
12	21.2	2.5	2.4	chr22	21867954	21867993	(28950475)	+	(GCGA)n	Simple_repeat	1	41	(0)	2436082
287	25.2	18.2	0.0	chr22	21868261	21868359	(28950109)	C	L2a	LINE/L2	(98)	3328	3208	2436083
1459	15.6	0.4	3.4	chr22	23246143	23246379	(27572089)	+	AluJr	SINE/Alu	1	230	(82)	2438001
1399	23.3	10.4	1.1	chr22	23246380	23246536	(27571932)	C	L1MB7	LINE/L1	(377)	5806	5610	2438000
258	20.7	0.0	0.7	chr22	23566056	23566129	(27252339)	C	MIRc	SINE/MIR	(91)	171	99	2438498
225	21.9	13.1	0.0	chr22	23796919	23796991	(27021477)	+	L3	LINE/CR1	3961	4044	(55)	2438992
35	19.1	1.0	5.0	chr22	25282477	25282574	(25535894)	+	GA-rich	Low_complexity	1	99	(0)	2441920
18	7.7	0.0	0.0	chr22	25282866	25282893	(25535575)	+	(GGC)n	Simple_repeat	1	28	(0)	2441921
410	27.4	12.1	3.4	chr22	26484073	26484276	(24334192)	+	MIRb	SINE/MIR	33	256	(12)	2444423
449	25.2	5.9	1.9	chr22	27532092	27532253	(23286215)	+	L1MC5	LINE/L1	9130	9298	(6)	2446904
194	28.2	1.4	1.4	chr22	27532260	27532331	(23286137)	+	MIRb	SINE/MIR	3	74	(194)	2446905
522	24.4	3.5	4.7	chr22	27532340	27532384	(23286084)	C	MIRb	SINE/MIR	(64)	204	166	2446906
2273	8.3	0.0	1.9	chr22	27532385	27532698	(23285770)	C	AluY	SINE/Alu	(3)	308	1	2446907
255	31.4	11.4	3.2	chr22	28592587	28592803	(22225665)	+	L2	LINE/L2	1970	2206	(1213)	2448757
17	32.8	2.2	2.1	chr22	29315398	29315488	(21502980)	+	G-rich	Low_complexity	1	93	(0)	2450310
41	0.0	0.0	0.0	chr22	29827758	29827792	(20990676)	+	(AC)n	Simple_repeat	1	35	(0)	2451422
76	17.4	1.8	2.9	chr22	29827811	29827980	(20990488)	+	(AC)n	Simple_repeat	1	173	(0)	2451422
54	21.2	5.0	0.0	chr22	29891297	29891443	(20927025)	+	(TA)n	Simple_repeat	1	154	(0)	2451586
1992	13.4	0.0	0.7	chr22	29891444	29891726	(20926742)	C	AluSz6	SINE/Alu	(25)	287	7	2451587
396	23.9	2.8	7.4	chr22	32007821	32007921	(18810547)	+	L1MEf	LINE/L1	1874	1976	(4657)	2456175
874	11.4	0.7	11.4	chr22	32007927	32008084	(18810384)	C	AluSx3	SINE/Alu	(78)	233	93	2456178
255	11.4	0.0	0.0	chr22	32008105	32008139	(18810329)	+	Alu	SINE/Alu	254	288	(13)	2456179
519	21.8	13.0	0.0	chr22	32008167	32008354	(18810114)	+	L1MEf	LINE/L1	2128	2343	(4290)	2456175
2519	6.5	0.3	0.3	chr22	32008368	32008674	(18809794)	+	AluSp	SINE/Alu	2	308	(5)	2456180
949	27.1	6.5	5.0	chr22	32880256	32880698	(17937770)	C	LTR16A1	LTR/ERVL	(2)	454	5	2457882
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
290	31.9	10.9	1.2	chr22	33946050	33946214	(16872254)	+	L2b	LINE/L2	1888	2070	(1349)	2460093
267	25.0	1.5	0.0	chr22	33946221	33946306	(16872162)	+	L2b	LINE/L2	3317	3426	(0)	2460093
397	31.6	6.5	4.0	chr22	35535591	35535814	(15282654)	C	L2b	LINE/L2	(225)	3150	2921	2463244
333	23.8	2.3	1.2	chr22	35535790	35535874	(15282594)	C	MIR3	SINE/MIR	(85)	123	38	2463245
13	8.5	4.0	0.0	chr22	37905914	37905938	(12912530)	+	(GGC)n	Simple_repeat	1	26	(0)	2468378
12	17.4	7.0	4.9	chr22	37906164	37906220	(12912248)	+	(GGC)n	Simple_repeat	1	61	(0)	2468379
28	19.3	5.5	4.3	chr22	37906307	37906415	(12912053)	+	(CGGAGC)n	Simple_repeat	1	115	(0)	2468380
13	8.1	0.0	6.7	chr22	37906584	37906613	(12911855)	+	(CGGG)n	Simple_repeat	1	30	(0)	2468381
19	26.7	1.6	3.1	chr22	38202654	38202725	(12615743)	+	(GT)n	Simple_repeat	1	70	(0)	2469024
193	36.8	11.2	2.1	chr22	38713311	38713496	(12104972)	C	L2c	LINE/L2	(557)	2862	2658	2470154
296	26.6	24.4	0.6	chr22	38713613	38713771	(12104697)	+	MIRb	SINE/MIR	3	211	(57)	2470155
392	31.1	16.3	2.4	chr22	38713820	38714193	(12104275)	C	L2c	LINE/L2	(971)	2448	2011	2470154
40	2.5	0.0	0.0	chr22	38843958	38843998	(11974470)	+	(GGAGCC)n	Simple_repeat	1	41	(0)	2470391
18	21.4	5.1	0.0	chr22	38844089	38844147	(11974321)	+	(CGGCCC)n	Simple_repeat	1	62	(0)	2470392
17	16.8	0.0	7.4	chr22	41833037	41833090	(8985378)	+	G-rich	Low_complexity	1	54	(0)	2476877
12	15.3	3.5	0.0	chr22	41833358	41833386	(8985082)	+	(GGTG)n	Simple_repeat	1	30	(0)	2476878
16	6.1	5.3	5.0	chr22	41914574	41914611	(8903857)	+	(GCGCGA)n	Simple_repeat	1	40	(0)	2477045
28	7.9	0.0	0.0	chr22	41915070	41915109	(8903359)	+	(GCTCCG)n	Simple_repeat	1	40	(0)	2477046
184	32.8	0.0	0.0	chr22	43110225	43110282	(7708186)	+	MIRb	SINE/MIR	121	178	(90)	2479618
1075	22.0	13.7	3.7	chr22	43187850	43188009	(7630459)	C	BLACKJACK	DNA/hAT-Blackjack	(740)	2229	2079	2479780
878	12.1	0.8	0.0	chr22	43188010	43188133	(7630335)	+	FLAM_A	SINE/Alu	1	125	(17)	2479781
1075	22.0	13.7	3.7	chr22	43188134	43188430	(7630038)	C	BLACKJACK	DNA/hAT-Blackjack	(891)	2078	1719	2479780
12	14.7	3.7	8.9	chr22	43923847	43923900	(6894568)	+	(GACCC)n	Simple_repeat	1	56	(0)	2481024
15	3.8	7.4	0.0	chr22	43923885	43923911	(6894557)	+	(CCG)n	Simple_repeat	1	29	(0)	2481025
1849	23.7	6.0	10.4	chr22	44177091	44177736	(6640732)	C	L1MC4	LINE/L1	(65)	7977	7364	2481485
326	33.4	10.2	4.3	chr22	44533982	44534406	(6284062)	C	L2a	LINE/L2	(14)	3412	2936	2482144
12	22.1	0.0	8.8	chr22	46576836	46576892	(4241576)	+	G-rich	Low_complexity	1	57	(0)	2485757
20	25.4	3.5	4.5	chr22	46907068	46907153	(3911315)	+	(TG)n	Simple_repeat	1	89	(0)	2486214
2866	27.6	5.3	7.4	chr22	47025951	47027301	(3791167)	+	L1MEc	LINE/L1	3863	5183	(1136)	2486349
547	33.5	2.3	1.9	chr22	48487260	48487475	(2330993)	+	L2c	LINE/L2	3171	3387	(0)	2488333
671	29.1	13.0	8.8	chr22	49861737	49862094	(956374)	C	L1MC4	LINE/L1	(2202)	575	165	2489848
447	22.1	5.3	1.6	chr22	49862277	49862403	(956065)	C	AluJo	SINE/Alu	(180)	132	1	2489854
405	13.0	7.8	3.1	chr22	49972792	49973865	(844603)	+	(GT)n	Simple_repeat	1	1123	(0)	2490010
19	4.5	0.0	0.0	chr22	50185744	50185766	(632702)	+	(G)n	Simple_repeat	1	23	(0)	2490310
23	19.0	3.9	3.8	chr22	50185845	50185921	(632547)	+	(CCCGC)n	Simple_repeat	1	80	(0)	2490311
19	31.1	2.1	2.1	chr22	50186029	50186122	(632346)	+	G-rich	Low_complexity	1	96	(0)	2490312
682	16.0	0.0	0.8	chr3	4377201	4377320	(193918239)	C	L1ME1	LINE/L1	(13)	6166	6048	2498890
319	21.1	3.8	0.0	chr3	4377358	4377433	(193918126)	C	MIR	SINE/MIR	(27)	235	157	2498891
224	17.0	19.7	0.0	chr3	4377448	4377500	(193918059)	C	MIR	SINE/MIR	(184)	78	13	2498891
30	17.1	3.0	0.0	chr3	5122066	5122131	(193173428)	+	(AATG)n	Simple_repeat	1	68	(0)	2500268
2014	7.8	2.1	3.2	chr3	9945822	9946135	(188349424)	C	AluSx3	SINE/Alu	(0)	311	1	2508319
1501	17.1	0.0	3.8	chr3	10036855	10037118	(188258441)	C	AluJb	SINE/Alu	(31)	281	28	2508524
599	28.8	7.2	5.5	chr3	10037153	10037534	(188258025)	+	L1M5	LINE/L1	5297	5685	(439)	2508525
1181	25.9	15.7	4.8	chr3	10859827	10860409	(187435150)	C	Kanga1c	DNA/TcMar-Tc2	(67)	662	5	2510258
19	3.7	0.0	3.3	chr3	13480276	13480305	(184815254)	+	(GCCCC)n	Simple_repeat	1	30	(0)	2515339
19	24.0	1.2	6.0	chr3	13480361	13480442	(184815117)	+	G-rich	Low_complexity	1	83	(0)	2515340
18	22.8	1.2	7.2	chr3	13480509	13480590	(184814969)	+	G-rich	Low_complexity	1	83	(0)	2515341
259	30.9	17.6	2.2	chr3	14122636	14123025	(184172534)	C	L2b	LINE/L2	(8)	3367	2855	2516333
14	15.3	0.0	0.0	chr3	27369307	27369335	(170926224)	+	(GTCCC)n	Simple_repeat	1	29	(0)	2535958
1643	28.7	8.5	4.7	chr3	29557447	29558561	(168736998)	+	L1M6	LINE/L1	506	1667	(4829)	2539348
767	27.4	8.0	0.9	chr3	31373615	31373846	(166921713)	+	MIR	SINE/MIR	13	262	(0)	2541992
653	25.0	0.6	0.6	chr3	33113569	33113725	(165181834)	+	MER5A	DNA/hAT-Charlie	1	157	(32)	2545323
24	19.1	3.2	1.5	chr3	33114003	33114065	(165181494)	+	(CCTT)n	Simple_repeat	1	65	(0)	2545324
628	27.4	12.2	6.7	chr3	33818817	33819527	(164476032)	C	HAL1ME	LINE/L1	(867)	1598	836	2546517
919	14.4	11.0	8.0	chr3	33819842	33820001	(164475558)	C	L1MB3	LINE/L1	(1)	6182	6008	2546519
15	4.7	0.0	0.0	chr3	38346826	38346847	(159948712)	+	(CGGA)n	Simple_repeat	1	22	(0)	2552903
289	22.3	7.4	4.3	chr3	50028677	50028793	(148266766)	+	L2a	LINE/L2	3298	3418	(8)	2572490
2568	2.5	0.0	0.0	chr3	50226615	50226899	(148068660)	C	AluYk2	SINE/Alu	(13)	298	14	2572790
284	22.2	14.7	1.0	chr3	52154092	52154191	(146141368)	+	L2b	LINE/L2	3242	3357	(18)	2575489
280	8.8	0.0	0.0	chr3	52154795	52154828	(146140731)	+	AluSp	SINE/Alu	232	265	(48)	2575490
1408	26.4	16.0	5.6	chr3	53882514	53883477	(144412082)	+	L2c	LINE/L2	2263	3383	(4)	2578194
13	20.3	3.6	5.2	chr3	57597457	57597512	(140698047)	+	(CGCCTG)n	Simple_repeat	1	58	(0)	2584256
11334	11.1	4.1	12.2	chr3	58448282	58448953	(139846606)	C	Tigger1	DNA/TcMar-Tigger	(1339)	1079	399	2586026
1040	17.1	0.6	3.3	chr3	58448955	58449135	(139846424)	C	AluJb	SINE/Alu	(0)	312	137	2586032
583	11.8	0.0	11.3	chr3	58449136	58449250	(139846309)	C	Tigger1	DNA/TcMar-Tigger	(2013)	405	304	2586026
49	0.0	0.0	0.0	chr3	75929173	75929214	(122366345)	+	(GT)n	Simple_repeat	1	42	(0)	2614856
694	38.6	5.9	3.2	chr3	75929437	75929701	(122365858)	+	L2a	LINE/L2	454	712	(2707)	2614857
12823	12.9	1.1	0.9	chr3	83553862	83555767	(114739792)	C	L1PA10	LINE/L1	(3606)	2855	942	2624719
1021	32.5	10.1	4.7	chr3	97961950	97962521	(100333038)	C	L2c	LINE/L2	(556)	2863	2258	2638427
1939	29.1	3.4	7.7	chr3	103936371	103937294	(94358265)	C	L1MEc	LINE/L1	(3009)	3310	2427	2646467
24	12.5	5.8	0.0	chr3	112561652	112561703	(85733856)	+	(GACGG)n	Simple_repeat	1	55	(0)	2658010
5691	5.4	0.1	0.0	chr3	113164041	113164708	(85130851)	+	L1PA8	LINE/L1	5501	6169	(3)	2658837
15	14.8	0.0	7.0	chr3	114758831	114758873	(83536686)	+	(TTTCC)n	Simple_repeat	1	43	(0)	2661160
803	24.9	0.8	0.5	chr3	127154092	127156089	(71139470)	+	(TGTGTG)n	Simple_repeat	1	2015	(0)	2679600
486	32.2	3.5	2.9	chr3	129108773	129109072	(69186487)	+	L1MC5a	LINE/L1	2000	2280	(497)	2683054
12	4.1	3.5	6.7	chr3	129606123	129606151	(68689408)	+	(CGGG)n	Simple_repeat	1	30	(0)	2684061
14	12.7	0.0	0.0	chr3	129606523	129606548	(68689011)	+	(CAG)n	Simple_repeat	1	26	(0)	2684062
242	28.1	6.9	4.0	chr3	129681457	129681582	(68613977)	C	L2a	LINE/L2	(575)	2844	2715	2684204
2341	10.5	0.7	0.0	chr3	129681626	129681920	(68613639)	+	AluSx	SINE/Alu	1	297	(15)	2684216
528	32.2	4.9	3.6	chr3	130525599	130525937	(67769622)	+	L2b	LINE/L2	2842	3185	(190)	2685623
18	29.3	1.7	0.0	chr3	133038328	133038385	(65257174)	+	(GC)n	Simple_repeat	1	59	(0)	2689335
13	15.9	0.0	0.0	chr3	133038492	133038519	(65257040)	+	G-rich	Low_complexity	1	28	(0)	2689336
13	13.2	0.0	0.0	chr3	135812264	135812288	(62483271)	+	(TTAA)n	Simple_repeat	1	25	(0)	2693378
1905	26.9	8.8	4.8	chr3	138471139	138472009	(59823550)	C	L1MEd	LINE/L1	(5843)	1243	335	2697598
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
13	22.3	0.0	8.2	chr3	143119664	143119724	(55175835)	+	G-rich	Low_complexity	1	61	(0)	2705218
553	24.2	3.2	0.0	chr3	143669045	143669164	(54626395)	+	MER96	DNA/hAT-Tip100	49	172	(3)	2705979
399	23.9	0.0	0.0	chr3	144862880	144862950	(53432609)	C	MLT1A0	LTR/ERVL-MaLR	(135)	230	160	2707602
323	20.4	10.2	1.1	chr3	144862943	144863031	(53432528)	C	MLT1A0	LTR/ERVL-MaLR	(267)	98	1	2707602
14	13.7	4.5	4.3	chr3	146251023	146251066	(52044493)	+	GA-rich	Low_complexity	1	46	(0)	2709348
16	0.0	0.0	0.0	chr3	151086481	151086497	(47209062)	+	(T)n	Simple_repeat	1	17	(0)	2716326
370	23.3	24.4	1.4	chr3	153611633	153612046	(44683513)	+	L2a	LINE/L2	2816	3426	(0)	2720007
44	0.0	0.0	0.0	chr3	160756753	160756790	(37538769)	+	(GT)n	Simple_repeat	1	38	(0)	2730313
793	14.0	0.0	0.0	chr3	169649183	169649289	(28646270)	+	AluJb	SINE/Alu	6	112	(200)	2741613
26	0.0	0.0	0.0	chr3	170038081	170038105	(28257454)	+	(GCGGG)n	Simple_repeat	1	25	(0)	2742256
274	37.2	3.9	3.5	chr3	175813060	175813262	(22482297)	C	L2a	LINE/L2	(164)	3223	3020	2750894
5317	23.5	6.8	2.3	chr3	178342762	178343919	(19951640)	+	L1PA13	LINE/L1	28	1240	(5545)	2754567
5857	13.6	2.0	4.7	chr3	178343922	178344955	(19950604)	+	L1PA13	LINE/L1	1377	2381	(4404)	2754567
32	30.6	1.7	4.5	chr3	184562169	184562342	(13733217)	+	(GCCGCC)n	Simple_repeat	1	177	(0)	2764911
1144	25.3	5.8	0.6	chr3	191431206	191431547	(6864012)	C	L2	LINE/L2	(939)	2480	2120	2776515
299	31.9	14.0	0.0	chr3	191431548	191431688	(6863871)	C	L2	LINE/L2	(1805)	1614	1451	2776515
807	20.6	5.2	2.0	chr3	194324581	194325439	(3970120)	+	(CA)n	Simple_repeat	2	897	(0)	2780937
610	28.2	13.2	1.8	chr3	194333041	194333440	(3962119)	C	MER20B	DNA/hAT-Charlie	(10)	773	321	2780947
545	27.1	5.5	4.1	chr3	194334293	194334488	(3961071)	C	MIR	SINE/MIR	(0)	262	64	2780948
1744	17.9	2.7	0.3	chr3	195372540	195372830	(2922729)	+	AluJo	SINE/Alu	2	299	(13)	2782787
1091	21.3	4.3	5.2	chr3	195372831	195373007	(2922552)	+	AluSz	SINE/Alu	134	302	(10)	2782786
12	15.7	2.6	5.0	chr3	195442412	195442450	(2853109)	+	GA-rich	Low_complexity	1	40	(0)	2782938
425	18.6	11.9	0.7	chr3	195543917	195544057	(2751502)	+	MLT1C	LTR/ERVL-MaLR	303	461	(6)	2783237
268	17.0	7.7	1.8	chr3	196164562	196165339	(2130220)	+	(GT)n	Simple_repeat	1	838	(0)	2784386
250	22.0	3.7	3.0	chr3	196165340	196165351	(2130208)	+	(GTGTGTT)n	Simple_repeat	1	819	(0)	2784387
29	5.6	8.9	0.0	chr3	196165370	196165425	(2130134)	+	(TG)n	Simple_repeat	1	61	(0)	2784388
32	3.9	7.3	1.7	chr3	196165472	196165526	(2130033)	+	(GT)n	Simple_repeat	1	59	(0)	2784389
240	29.7	8.3	0.0	chr3	196165836	196165946	(2129613)	C	MLT1J	LTR/ERVL-MaLR	(8)	504	384	2784390
13	24.2	2.3	0.0	chr3	197029074	197029158	(1266401)	+	(CCGCTCG)n	Simple_repeat	1	86	(0)	2786242
13	23.9	0.0	4.2	chr3	197029578	197029625	(1265934)	+	(GCCCCGG)n	Simple_repeat	1	48	(0)	2786243
16	8.8	8.3	0.0	chr3	197029712	197029754	(1265805)	+	G-rich	Low_complexity	1	46	(0)	2786244
255	24.5	7.5	0.0	chr4	1105808	1105905	(189108650)	C	L2a	LINE/L2	(292)	3134	3029	2789867
351	21.5	15.1	0.7	chr4	1346148	1346283	(188868272)	C	L1MB7	LINE/L1	(0)	6184	6026	2790133
14	25.5	6.2	0.0	chr4	1346620	1346684	(188867871)	+	(GGCGCGG)n	Simple_repeat	1	69	(0)	2790134
12	6.9	5.9	5.6	chr4	3292251	3292284	(186922271)	+	G-rich	Low_complexity	1	36	(0)	2793024
377	28.3	18.2	2.2	chr4	4250854	4251064	(185963491)	+	MIRb	SINE/MIR	7	268	(0)	2794365
1562	19.2	7.8	6.4	chr4	5015963	5016352	(185198203)	+	MSTD	LTR/ERVL-MaLR	1	396	(0)	2795864
271	32.9	5.3	3.6	chr4	5016353	5016443	(185198112)	C	MIRb	SINE/MIR	(165)	103	3	2795863
1928	23.9	5.5	0.8	chr4	7173846	7174364	(183040191)	C	L1MB8	LINE/L1	(9)	6169	5625	2799751
282	20.6	2.7	2.7	chr4	7174368	7174442	(183040113)	C	MIR	SINE/MIR	(87)	175	101	2799752
1979	15.5	0.0	0.3	chr4	7174444	7174740	(183039815)	+	AluJb	SINE/Alu	11	306	(6)	2799753
5272	18.7	5.4	4.6	chr4	10717609	10720371	(179494184)	+	L1MD1	LINE/L1	1319	4177	(2829)	2804982
879	18.6	6.8	1.4	chr4	10720368	10720582	(179493973)	+	L1MD1	LINE/L1	6122	6341	(863)	2804982
13	13.6	2.9	2.9	chr4	42151696	42151729	(148062826)	+	(CGCCGG)n	Simple_repeat	1	35	(0)	2855149
1866	19.7	1.4	0.6	chr4	43853442	43853803	(146360752)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	2857496
863	17.6	1.2	0.2	chr4	49090455	49091234	(141123321)	+	ALR/Alpha	Satellite/centr	1	788	(0)	2864886
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
304	22.8	0.0	0.0	chr4	49510858	49510914	(140703641)	C	MER47C	DNA/TcMar-Tigger	(28)	69	13	2865176
181	28.9	12.1	0.0	chr4	54088461	54088612	(136125943)	C	L2a	LINE/L2	(279)	3147	2975	2868709
869	25.5	7.2	2.0	chr4	54088660	54088963	(136125592)	C	L2a	LINE/L2	(590)	2829	2509	2868709
1013	28.6	4.7	5.4	chr4	62781121	62781498	(127433057)	C	LTR16A2	LTR/ERVL	(14)	481	96	2881218
37	0.0	8.2	0.0	chr4	88457551	88457599	(101756956)	+	(TGTGAGGGC)n	Simple_repeat	1	53	(0)	2917211
9050	20.0	9.4	7.4	chr4	105254713	105257151	(84957404)	C	L1MC1	LINE/L1	(2811)	3833	1134	2939224
675	22.7	0.0	0.0	chr4	118921473	118921591	(71292964)	+	FLAM_A	SINE/Alu	7	125	(17)	2957719
577	30.1	16.6	1.2	chr4	118921790	118922109	(71292446)	+	L2c	LINE/L2	3007	3385	(2)	2957718
16	13.2	4.4	4.3	chr4	121951388	121951432	(68263123)	+	(CCGC)n	Simple_repeat	1	47	(0)	2961850
18	17.3	0.0	0.0	chr4	121951585	121951624	(68262931)	+	(TCCTCG)n	Simple_repeat	1	40	(0)	2961851
16	8.8	5.0	4.8	chr4	121952061	121952100	(68262455)	+	G-rich	Low_complexity	1	42	(0)	2961852
7533	3.5	0.1	0.1	chr4	140484468	140485565	(49728990)	+	L1PA3	LINE/L1	5057	6155	(0)	2986300
456	15.0	3.6	0.0	chr4	140485584	140485663	(49728892)	+	L1M2	LINE/L1	5593	5675	(625)	2986299
1024	20.1	0.0	0.6	chr4	140485667	140485840	(49728715)	+	AluJr	SINE/Alu	140	312	(0)	2986301
18	21.7	2.6	6.2	chr4	145733135	145733212	(44481343)	+	(GCCC)n	Simple_repeat	1	80	(0)	2993328
531	32.6	6.3	4.1	chr4	164317266	164317707	(25896848)	C	MLT1J	LTR/ERVL-MaLR	(14)	498	4	3019254
329	36.7	7.4	4.9	chr4	168507589	168508068	(21706487)	+	L2a	LINE/L2	2711	3212	(175)	3024913
1405	10.1	1.4	0.0	chr4	168508069	168508285	(21706270)	+	L1MA5A	LINE/L1	6075	6294	(3)	3024915
13	0.0	0.0	0.0	chr4	176792219	176792235	(13422320)	+	(GGC)n	Simple_repeat	1	17	(0)	3036002
14	30.2	0.0	4.3	chr4	176792323	176792392	(13422163)	+	G-rich	Low_complexity	1	70	(0)	3036003
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
332	22.9	6.7	3.0	chr5	1929062	1930478	(179607781)	+	(GTGTCGT)n	Simple_repeat	1	1512	(0)	3056791
247	22.4	1.8	0.2	chr5	2888615	2889181	(178649078)	+	(TG)n	Simple_repeat	1	577	(0)	3057758
2178	20.0	11.0	6.3	chr5	5386297	5386884	(176151375)	+	MLT1E3	LTR/ERVL-MaLR	1	619	(5)	3060499
1482	21.7	4.0	5.5	chr5	6370990	6371374	(175166885)	+	MLT1B	LTR/ERVL-MaLR	1	379	(11)	3061746
227	32.8	7.8	3.2	chr5	6371391	6371513	(175166746)	C	MER5A	DNA/hAT-Charlie	(26)	163	35	3061747
36	0.0	0.0	0.0	chr5	10761386	10761418	(170776841)	+	(CGGGGG)n	Simple_repeat	1	33	(0)	3067423
13	18.9	3.5	6.8	chr5	10761419	10761475	(170776784)	+	GA-rich	Low_complexity	1	59	(0)	3067424
320	21.4	6.7	2.0	chr5	14523270	14523369	(167014890)	C	LTR33	LTR/ERVL	(2)	513	409	3072271
551	23.1	8.1	0.0	chr5	14523422	14523581	(167014678)	C	LTR33	LTR/ERVL	(332)	183	10	3072271
722	30.8	2.7	2.7	chr5	20196232	20196488	(161341771)	C	MIR	SINE/MIR	(1)	261	5	3080359
1688	17.1	0.3	5.2	chr5	24174250	24174558	(157363701)	C	AluJo	SINE/Alu	(18)	294	1	3085743
4017	21.1	6.0	1.5	chr5	25185581	25187023	(156351236)	+	L1MA9	LINE/L1	4767	6283	(29)	3087031
372	29.4	13.0	2.1	chr5	25595063	25595254	(155943005)	+	LTR16A	LTR/ERVL	6	220	(218)	3087511
555	28.6	13.4	6.6	chr5	31416377	31416799	(150121460)	C	L2b	LINE/L2	(4)	3371	2916	3094898
23	11.4	1.9	5.6	chr5	35768029	35768081	(145770178)	+	(GTT)n	Simple_repeat	1	54	(0)	3101864
13	28.9	1.8	1.8	chr5	35768198	35768253	(145770006)	+	(ATG)n	Simple_repeat	1	57	(0)	3101865
449	27.8	6.5	3.1	chr5	35768444	35768606	(145769653)	+	MIRc	SINE/MIR	66	234	(34)	3101866
12	19.5	2.9	0.0	chr5	38846052	38846086	(142692173)	+	(CGCCCCG)n	Simple_repeat	1	36	(0)	3106772
487	36.5	4.4	9.3	chr5	41931758	41932359	(139605900)	C	L2	LINE/L2	(2657)	762	192	3111019
14	20.7	2.6	0.0	chr5	52989211	52989249	(128549010)	+	G-rich	Low_complexity	1	40	(0)	3119683
1129	21.2	10.8	7.8	chr5	54548804	54549136	(126989123)	C	MER2	DNA/TcMar-Tigger	(0)	345	2	3121895
292	24.4	10.6	3.8	chr5	54549137	54549209	(126989050)	+	MIRb	SINE/MIR	156	232	(36)	3121894
474	25.0	2.6	9.4	chr5	55067105	55067307	(126470952)	C	MamRep1879	DNA/hAT-Tip100?	(27)	189	1	3122664
261	30.7	11.9	3.0	chr5	55067309	55067506	(126470753)	+	L2b	LINE/L2	2778	2995	(424)	3122659
612	27.6	3.1	0.3	chr5	56267616	56267811	(125270448)	+	MIR	SINE/MIR	26	250	(18)	3124766
627	20.5	12.7	0.7	chr5	56479997	56480148	(125058111)	C	MER45A	DNA/hAT-Tip100	(5)	173	1	3125097
20	15.1	4.7	4.5	chr5	56815266	56815329	(124722930)	+	(CGCCTC)n	Simple_repeat	1	67	(0)	3125609
361	36.1	4.8	3.1	chr5	59145101	59145326	(122392933)	C	MIRb	SINE/MIR	(15)	253	24	3129121
383	29.0	1.5	4.4	chr5	63520278	63520414	(118017845)	+	MLT2F	LTR/ERVL	2	134	(529)	3135294
1699	20.9	3.7	0.6	chr5	63520445	63520786	(118017473)	+	ERVL-B4-int	LTR/ERVL	4105	4457	(1257)	3135295
13	17.0	3.0	0.0	chr5	66144345	66144377	(115393882)	+	G-rich	Low_complexity	1	34	(0)	3139018
17	18.3	0.0	0.0	chr5	66144385	66144421	(115393838)	+	(CGGCTT)n	Simple_repeat	1	37	(0)	3139019
669	25.6	3.0	5.8	chr5	66501447	66501794	(115036465)	C	L1MEi	LINE/L1	(2)	2210	1873	3139528
2157	29.2	8.9	5.3	chr5	66501805	66502393	(115035866)	C	L1MEd	LINE/L1	(5284)	1819	1183	3139527
317	27.4	6.7	6.7	chr5	71696190	71696369	(109841890)	C	L1ME3Cz	LINE/L1	(243)	754	575	3147928
1006	23.3	3.4	3.8	chr5	71696373	71696635	(109841624)	+	MIR	SINE/MIR	1	262	(0)	3147929
2727	6.8	0.3	0.0	chr5	74684666	74684976	(106853283)	C	AluSx1	SINE/Alu	(0)	312	1	3152358
12	18.1	0.0	3.0	chr5	74685110	74685142	(106853117)	+	G-rich	Low_complexity	1	33	(0)	3152359
14	17.6	0.0	0.0	chr5	74685356	74685387	(106852872)	+	(GGTGGC)n	Simple_repeat	1	32	(0)	3152360
15	9.1	0.0	0.0	chr5	77630660	77630683	(103907576)	+	(GGC)n	Simple_repeat	1	24	(0)	3156917
1416	13.4	2.2	0.0	chr5	83117741	83117963	(98420296)	C	L1PA10	LINE/L1	(5)	6163	5936	3165524
18	20.2	0.0	2.3	chr5	83118012	83118044	(98420215)	+	(AT)n	Simple_repeat	1	32	(0)	3165525
40	0.0	0.0	0.0	chr5	83118045	83118078	(98420181)	+	(CA)n	Simple_repeat	1	34	(0)	3165526
18	20.2	0.0	2.3	chr5	83118079	83118088	(98420171)	+	(AT)n	Simple_repeat	1	10	(0)	3165527
347	39.1	5.3	8.8	chr5	86426122	86426468	(95111791)	C	L2b	LINE/L2	(86)	3289	2958	3169779
15	5.0	0.0	0.0	chr5	89208202	89208216	(92330043)	+	(GC)n	Simple_repeat	1	15	(0)	3173275
38	0.0	0.0	0.0	chr5	89208217	89208249	(92330010)	+	(CA)n	Simple_repeat	1	33	(0)	3173276
2068	17.3	3.8	0.0	chr5	101709422	101709779	(79828480)	C	L1PA13	LINE/L1	(6609)	372	1	3189234
2122	19.2	2.0	0.8	chr5	101709865	101710262	(79827997)	C	MER49	LTR/ERV1	(0)	923	521	3189235
1782	30.0	6.8	3.4	chr5	103495922	103496956	(78041303)	C	L1MEh	LINE/L1	(561)	1674	602	3191539
686	25.5	6.4	1.3	chr5	103560670	103560907	(77977352)	C	L1M5	LINE/L1	(1113)	5033	4783	3191609
245	33.1	4.0	4.0	chr5	107338136	107338261	(74199998)	C	L2a	LINE/L2	(6)	3420	3295	3196237
5187	18.0	2.0	1.0	chr5	110432096	110433584	(71104675)	+	L1PA15-16	LINE/L1	2301	3810	(3039)	3200240
18	27.9	0.0	2.9	chr5	111757614	111757681	(69780578)	+	(CGCACCC)n	Simple_repeat	1	68	(0)	3201827
464	33.6	5.2	0.2	chr5	114152551	114152917	(67385342)	C	L2b	LINE/L2	(0)	3426	2932	3205238
915	30.8	4.9	4.0	chr5	126012868	126013290	(55524969)	+	L2	LINE/L2	1368	1794	(1625)	3220675
808	26.3	11.1	5.2	chr5	126013324	126013364	(55524895)	+	L2a	LINE/L2	1675	1715	(1704)	3220676
48	0.0	0.0	0.0	chr5	126013365	126013405	(55524854)	+	(CT)n	Simple_repeat	1	41	(0)	3220677
808	26.3	11.1	5.2	chr5	126013406	126013744	(55524515)	+	L2a	LINE/L2	1716	2080	(1339)	3220676
20	20.7	1.7	3.3	chr5	128083672	128083730	(53454529)	+	(GCC)n	Simple_repeat	1	60	(0)	3223723
12	22.9	2.3	2.3	chr5	128083748	128083790	(53454469)	+	(GCCC)n	Simple_repeat	1	44	(0)	3223724
865	26.4	7.2	0.6	chr5	128813959	128814297	(52723962)	C	L1M6	LINE/L1	(4474)	2022	1660	3224607
11	25.6	0.0	2.5	chr5	132830657	132830696	(48707563)	+	(GGCTCC)n	Simple_repeat	1	40	(0)	3229982
638	31.2	10.4	3.3	chr5	135210077	135210467	(46327792)	C	L2c	LINE/L2	(3)	3384	2963	3234020
843	29.1	12.9	3.1	chr5	138803539	138803963	(42734296)	+	L2a	LINE/L2	2954	3426	(0)	3239645
9510	12.0	1.5	13.1	chr5	139549171	139550957	(41987302)	+	LTR12C	LTR/ERV1	3	1579	(0)	3241018
561	30.5	4.4	10.4	chr5	140557796	140558132	(40980127)	+	L2b	LINE/L2	3055	3370	(5)	3242820
632	27.2	10.6	9.6	chr5	140689874	140690169	(40848090)	+	L2c	LINE/L2	2935	3256	(131)	3243076
915	29.4	13.9	0.8	chr5	141993906	141994484	(39543775)	C	L2a	LINE/L2	(195)	3231	2559	3245011
348	30.4	6.5	6.9	chr5	141994487	141995016	(39543243)	C	L2-3_Crp	LINE/L2	(856)	1240	770	3245013
15	4.8	0.0	0.0	chr5	142770469	142770490	(38767769)	+	(CTCG)n	Simple_repeat	1	22	(0)	3246639
297	31.1	4.3	0.8	chr5	143183305	143183437	(38354822)	+	MIR	SINE/MIR	123	260	(2)	3247286
12	13.9	0.0	0.0	chr5	143403958	143403981	(38134278)	+	(GGC)n	Simple_repeat	1	24	(0)	3247590
224	28.6	9.3	1.0	chr5	144017992	144018090	(37520169)	+	MIRb	SINE/MIR	101	208	(60)	3248628
247	35.3	8.5	5.0	chr5	144018140	144018422	(37519837)	C	MamGypLTR1b	LTR/Gypsy	(76)	706	413	3248629
2105	11.2	0.0	0.0	chr5	146295236	146295512	(35242747)	+	AluSx1	SINE/Alu	34	310	(2)	3252290
14	12.7	0.0	0.0	chr5	150656530	150656555	(30881704)	+	(CCG)n	Simple_repeat	1	26	(0)	3260455
29	5.7	0.0	0.0	chr5	154858705	154858741	(26679518)	+	(CAGCCCGC)n	Simple_repeat	1	37	(0)	3268203
367	33.1	6.7	1.3	chr5	158076751	158076906	(23461353)	+	MIRc	SINE/MIR	102	266	(2)	3273971
12	20.9	0.0	4.8	chr5	160312606	160312647	(21225612)	+	(CCGCGCC)n	Simple_repeat	1	42	(0)	3277908
22	27.1	0.0	0.0	chr5	160312917	160312970	(21225289)	+	(TT)n	Simple_repeat	1	54	(0)	3277909
700	24.6	4.3	0.1	chr5	160350174	160350394	(21187865)	+	L1ME3G	LINE/L1	427	636	(288)	3277999
1975	15.6	0.7	0.7	chr5	160350422	160350728	(21187531)	+	AluJr	SINE/Alu	1	307	(5)	3278000
2615	23.2	9.4	9.4	chr5	163278742	163279838	(18258421)	+	L1MEf	LINE/L1	44	1140	(5060)	3282270
29	18.1	2.5	3.7	chr5	168291770	168291849	(13246410)	+	(GGC)n	Simple_repeat	1	82	(0)	3289721
264	29.6	8.6	6.8	chr5	170001664	170001905	(11536354)	C	L2b	LINE/L2	(4)	3383	3138	3292779
433	27.1	5.1	1.7	chr5	170001927	170002074	(11536185)	C	MIRb	SINE/MIR	(67)	201	38	3292780
419	30.9	8.2	0.6	chr5	170663129	170663297	(10874962)	C	MIRb	SINE/MIR	(76)	192	10	3294057
236	31.8	0.0	0.0	chr5	174229359	174229424	(7308835)	C	MIRb	SINE/MIR	(169)	99	34	3301114
958	29.3	6.0	3.4	chr5	174229557	174229963	(7308296)	+	MLT1J	LTR/ERVL-MaLR	28	445	(67)	3301117
298	29.3	3.9	3.9	chr5	175242533	175242660	(6295599)	+	LTR88b	LTR/Gypsy?	4	131	(706)	3303074
334	28.8	11.1	1.7	chr5	175243030	175243266	(6294993)	+	LTR84b	LTR/ERVL	119	380	(381)	3303075
17	3.8	0.0	6.5	chr5	176817932	176817962	(4720297)	+	(CCGC)n	Simple_repeat	1	31	(0)	3306050
12	10.1	9.4	0.0	chr5	176818103	176818134	(4720125)	+	(GCCCCT)n	Simple_repeat	1	35	(0)	3306051
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
14	12.6	8.3	0.0	chr5	179223072	179223107	(2315152)	+	(TTCA)n	Simple_repeat	1	39	(0)	3310513
19	0.0	0.0	0.0	chr5	179581439	179581459	(1956800)	+	(T)n	Simple_repeat	1	21	(0)	3311138
2081	15.2	0.7	1.3	chr5	179581675	179581984	(1956275)	C	AluJo	SINE/Alu	(4)	308	1	3311139
272	33.8	4.3	1.9	chr5	180353560	180353716	(1184543)	+	MIR	SINE/MIR	22	182	(80)	3312468
12	17.5	3.1	0.0	chr5	180649090	180649121	(889138)	+	(CGGCG)n	Simple_repeat	1	33	(0)	3313019
16	16.8	1.9	5.7	chr5	180649257	180649308	(888951)	+	(GGCCC)n	Simple_repeat	1	53	(0)	3313020
23	10.6	0.0	9.7	chr5	180649605	180649666	(888593)	+	G-rich	Low_complexity	1	62	(0)	3313021
2989	27.2	4.0	1.5	chr5	180924375	180926021	(612238)	+	L1M3b	LINE/L1	2033	3399	(4166)	3313436
688	0.0	0.0	0.0	chr5	181169610	181169682	(368577)	+	tRNA-Val-GTY	tRNA	1	73	(3)	3313774
11	20.7	0.0	2.9	chr5	181204719	181204753	(333506)	+	(CCGCAG)n	Simple_repeat	1	35	(0)	3313846
796	13.4	19.9	14.8	chr5	181216926	181217208	(321051)	C	AluJr	SINE/Alu	(11)	301	1	3313879
2931	10.3	2.4	3.9	chr6	1041804	1042341	(169763638)	C	L1PB	LINE/L1	(2665)	3481	2955	3315551
224	28.4	5.8	0.0	chr6	4494028	4494108	(166311871)	+	MIRc	SINE/MIR	48	133	(135)	3320531
547	25.3	15.1	6.5	chr6	4494109	4494476	(166311503)	C	MLT1J	LTR/ERVL-MaLR	(0)	512	108	3320532
13	8.7	0.0	3.7	chr6	4775765	4775791	(166030188)	+	(GGTGG)n	Simple_repeat	1	27	(0)	3321051
42	22.5	1.8	6.9	chr6	4776143	4776313	(166029666)	+	(GCCCC)n	Simple_repeat	1	174	(0)	3321052
235	24.6	2.8	1.4	chr6	6336439	6336508	(164469471)	C	MER102c	DNA/hAT-Charlie	(251)	80	10	3323271
2627	31.6	11.9	2.3	chr6	6646400	6647963	(164158016)	+	L2a	LINE/L2	781	2486	(933)	3323699
594	26.9	4.4	5.2	chr6	6710805	6711035	(164094944)	C	MER92-int	LTR/ERV1	(4980)	238	10	3323793
2504	11.9	2.5	2.7	chr6	12777242	12777619	(158028360)	C	L1PA15	LINE/L1	(6)	6159	5782	3333177
14	18.0	1.4	10.0	chr6	13013788	13013856	(157792123)	+	G-rich	Low_complexity	1	70	(0)	3333575
14	16.7	4.8	2.3	chr6	13014155	13014196	(157791783)	+	(CGG)n	Simple_repeat	1	44	(0)	3333576
9544	11.5	1.7	11.6	chr6	16196900	16198653	(154607326)	C	LTR12C	LTR/ERV1	(0)	1579	3	3339137
6460	14.7	4.0	8.5	chr6	17247323	17247516	(153558463)	C	L1MC	LINE/L1	(836)	5497	5330	3340802
2009	14.0	2.3	0.0	chr6	17247517	17247808	(153558171)	C	AluJb	SINE/Alu	(12)	300	2	3340803
833	12.9	0.0	5.8	chr6	18194664	18194802	(152611177)	C	FLAM_C	SINE/Alu	(12)	131	1	3342629
2897	16.6	4.2	5.2	chr6	18194803	18195341	(152610638)	C	L1MB5	LINE/L1	(36)	6138	5585	3342628
236	24.2	14.9	3.7	chr6	19281832	19281915	(151524064)	+	MIR3	SINE/MIR	46	140	(90)	3344197
2287	8.8	0.3	0.0	chr6	28757384	28757677	(142048302)	C	AluSp	SINE/Alu	(16)	297	3	3359168
643	0.0	0.0	0.0	chr6	28758364	28758435	(142047544)	C	tRNA-Ala-GCA	tRNA	(3)	72	1	3359169
10151	11.8	4.0	0.2	chr6	28865488	28867004	(141938975)	C	LTR12C	LTR/ERV1	(0)	1579	3	3359357
10249	20.4	2.9	1.9	chr6	29409121	29414505	(141391474)	+	L1PREC2	LINE/L1	1	6760	(1378)	3360075
17	22.9	5.9	0.0	chr6	30908441	30908491	(139897488)	+	GA-rich	Low_complexity	1	54	(0)	3362483
2856	12.2	3.0	4.0	chr6	31002556	31002701	(139803278)	C	LTR47B3	LTR/ERVL	(325)	139	1	3362625
2143	19.4	3.2	3.5	chr6	31002702	31002761	(139803218)	+	LTR47A2	LTR/ERVL	373	432	(0)	3362623
585	29.7	9.7	3.9	chr6	31002805	31003270	(139802709)	+	L1MEj	LINE/L1	535	1030	(1130)	3362627
2103	13.0	3.0	0.0	chr6	32407319	32407642	(138398337)	+	LTR64	LTR/ERV1	1	334	(194)	3364858
356	30.6	10.5	5.3	chr6	33299810	33300131	(137505848)	C	L2b	LINE/L2	(7)	3380	3080	3366146
974	17.0	5.0	2.9	chr6	34070977	34073549	(136732430)	+	(CA)n	Simple_repeat	1	2702	(0)	3367583
39	27.9	2.1	2.0	chr6	34392500	34392642	(136413337)	+	(CCG)n	Simple_repeat	1	146	(0)	3368274
597	21.3	11.5	3.3	chr6	40081605	40081818	(130724161)	+	MER34B	LTR/ERV1	329	562	(3)	3378953
15	27.1	2.6	5.1	chr6	40919233	40919308	(129886671)	+	GA-rich	Low_complexity	1	78	(0)	3380304
2397	15.5	1.2	0.0	chr6	52440070	52440475	(118365504)	C	Tigger17a	DNA/TcMar-Tigger	(1)	653	243	3398542
12505	13.0	7.4	1.0	chr6	70605220	70607751	(100198228)	+	L1PBa	LINE/L1	1326	3964	(2898)	3419469
36910	8.9	0.9	0.8	chr6	74537878	74542840	(96263139)	+	HERVL-int	LTR/ERVL	682	5654	(0)	3425101
14	21.6	0.0	2.5	chr6	75205781	75205820	(95600159)	+	(GGCAGC)n	Simple_repeat	1	40	(0)	3425881
311	28.2	9.2	10.6	chr6	79631261	79631458	(91174521)	+	L1M4b	LINE/L1	293	487	(6380)	3431532
379	35.8	7.8	5.6	chr6	84153724	84154173	(86651806)	C	L2c	LINE/L2	(2)	3385	2925	3437479
51	0.0	0.0	0.0	chr6	90477063	90477106	(80328873)	+	(AC)n	Simple_repeat	1	44	(0)	3446456
1401	34.5	8.2	4.5	chr6	98249939	98250860	(72555119)	C	L3	LINE/CR1	(754)	3345	2386	3456000
1747	30.1	13.7	1.3	chr6	100077059	100077960	(70728019)	C	L2	LINE/L2	(1405)	2014	984	3458530
21304	12.3	3.4	3.6	chr6	104907309	104910688	(65895291)	+	L1MA3	LINE/L1	15	3428	(4137)	3464637
192	34.0	14.2	0.0	chr6	105497246	105497348	(65308631)	+	MIR3	SINE/MIR	79	198	(10)	3465516
27	22.9	3.4	5.0	chr6	110815172	110815241	(59990738)	+	(GCCGCCC)n	Simple_repeat	1	108	(13)	3474363
17	8.0	10.0	0.0	chr6	110815242	110815281	(59990698)	+	(CGCG)n	Simple_repeat	1	44	(0)	3474364
27	22.9	3.4	5.0	chr6	110815282	110815288	(59990691)	+	(GCCGCCC)n	Simple_repeat	109	121	(0)	3474363
4156	10.9	0.2	1.0	chr6	112535697	112536063	(58269916)	C	L1PA13	LINE/L1	(11)	6152	5789	3477243
33	0.0	0.0	0.0	chr6	112536064	112536094	(58269885)	+	(TATG)n	Simple_repeat	1	31	(0)	3477244
629	27.8	3.2	1.1	chr6	114394223	114394404	(56411575)	+	L2a	LINE/L2	2483	2668	(751)	3480065
566	27.3	7.8	10.1	chr6	114394394	114394670	(56411309)	+	L2a	LINE/L2	3157	3426	(0)	3480065
801	23.5	2.2	7.6	chr6	114998055	114998374	(55807605)	+	LTR12F	LTR/ERV1	223	493	(26)	3480826
19	9.9	8.3	4.6	chr6	119078776	119078835	(51727144)	+	(CCGCAG)n	Simple_repeat	1	65	(0)	3486086
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
196	18.4	7.5	0.0	chr6	129399258	129399306	(41406673)	C	MIR	SINE/MIR	(1)	261	209	3499402
752	23.0	0.0	0.0	chr6	129399312	129399472	(41406507)	C	MER5A1	DNA/hAT-Charlie	(5)	161	1	3499403
286	30.7	1.9	1.9	chr6	129399490	129399592	(41406387)	C	MIR	SINE/MIR	(151)	111	9	3499404
24	28.1	2.5	4.1	chr6	131135502	131135621	(39670358)	+	(GCTGCC)n	Simple_repeat	1	123	(0)	3501897
18	24.2	3.3	5.3	chr6	131135644	131135734	(39670245)	+	(CCGCCT)n	Simple_repeat	1	94	(0)	3501898
14	17.6	2.5	2.4	chr6	131950864	131950903	(38855076)	+	(GCCGCA)n	Simple_repeat	1	41	(0)	3503156
13	16.8	0.0	5.4	chr6	131950933	131950969	(38855010)	+	(GCCCG)n	Simple_repeat	1	37	(0)	3503157
13	18.1	0.0	4.9	chr6	131951186	131951226	(38854753)	+	(GGCGAGC)n	Simple_repeat	1	41	(0)	3503158
1430	26.8	8.4	1.6	chr6	132491457	132492028	(38313951)	+	L2a	LINE/L2	650	1264	(2155)	3503892
21252	11.6	0.6	1.5	chr6	140326718	140329783	(30476196)	C	MER52-int	LTR/ERV1	(0)	7091	4052	3515929
4511	19.2	4.5	1.1	chr6	140932867	140933827	(29872152)	C	L1MC2	LINE/L1	(10)	6334	5340	3516651
622	31.3	4.6	7.5	chr6	141233848	141234409	(29571570)	C	L1ME3A	LINE/L1	(8)	6165	5621	3517009
231	25.8	3.1	3.1	chr6	141812012	141812075	(28993904)	C	L1MEi	LINE/L1	(2145)	67	4	3517721
2230	12.5	0.0	0.7	chr6	143213489	143213816	(27592163)	C	AluSx1	SINE/Alu	(0)	312	1	3519542
446	31.7	8.8	9.6	chr6	144331952	144332328	(26473651)	+	L2b	LINE/L2	2959	3332	(43)	3521253
381	31.2	9.3	1.1	chr6	144550606	144550840	(26255139)	C	MIRb	SINE/MIR	(6)	262	5	3521577
5013	24.0	6.5	3.5	chr6	145771284	145772158	(25033821)	C	L1ME1	LINE/L1	(2217)	4102	3241	3523172
18	23.2	0.0	3.7	chr6	147509159	147509212	(23296767)	+	(GCC)n	Simple_repeat	1	54	(0)	3525503
1147	23.0	11.1	3.2	chr6	148475257	148475629	(22330350)	C	MLT1A1	LTR/ERVL-MaLR	(0)	408	3	3527002
1296	14.4	1.8	5.3	chr6	148475728	148475955	(22330024)	C	Tigger7	DNA/TcMar-Tigger	(0)	2491	2272	3527003
28	24.9	2.0	2.9	chr6	149566288	149566388	(21239591)	+	(CCCGC)n	Simple_repeat	1	100	(0)	3528682
255	22.4	2.6	0.0	chr6	149567141	149567216	(21238763)	+	MER5A	DNA/hAT-Charlie	108	185	(4)	3528683
17	16.3	0.0	0.0	chr6	150005252	150005286	(20800693)	+	(CCGCC)n	Simple_repeat	1	35	(0)	3529502
331	33.9	6.4	2.6	chr6	150339799	150339992	(20465987)	+	Tigger12c	DNA/TcMar-Tigger	46	247	(487)	3530054
1806	11.5	1.5	3.0	chr6	153235726	153235994	(17569985)	+	AluSx3	SINE/Alu	37	301	(10)	3534639
552	32.5	8.6	5.0	chr6	153235999	153236640	(17569339)	+	L2a	LINE/L2	2755	3416	(10)	3534640
5292	9.3	0.1	0.0	chr6	154780356	154781093	(16024886)	C	L1PA8	LINE/L1	(0)	6172	5434	3537047
3711	8.2	0.2	0.6	chr6	154781099	154781616	(16024363)	+	L1P3	LINE/L1	4253	4768	(1378)	3537048
335	26.4	13.3	4.1	chr6	155672106	155672302	(15133677)	C	L2c	LINE/L2	(147)	3240	3023	3538431
188	28.6	3.9	0.0	chr6	155672558	155672606	(15133373)	+	MIR	SINE/MIR	206	256	(6)	3538433
15	18.8	6.2	5.8	chr6	159169709	159169789	(11636190)	+	(CGCTCCG)n	Simple_repeat	1	86	(0)	3543747
31	13.9	0.0	0.0	chr6	160218913	160218977	(10587002)	+	(CAG)n	Simple_repeat	1	65	(0)	3545197
28	17.5	2.3	5.7	chr6	160991642	160991727	(9814252)	+	(CGC)n	Simple_repeat	1	88	(0)	3546054
2180	10.9	2.9	0.3	chr6	163586651	163586952	(7219027)	+	AluSx1	SINE/Alu	1	310	(2)	3549650
1013	32.2	3.7	1.9	chr6	165894202	165894727	(4911252)	+	L3	LINE/CR1	3108	3643	(456)	3552512
2968	17.9	1.7	1.5	chr6	167271613	167272196	(3533783)	C	MER34A1	LTR/ERV1	(2)	585	1	3554233
718	26.7	14.2	6.5	chr6	167272197	167272419	(3533560)	C	MER45B	DNA/hAT-Tip100	(720)	320	60	3554232
2323	13.9	2.8	7.1	chr6	167272420	167273038	(3532941)	C	MER4B	LTR/ERV1	(0)	766	1	3554234
367	18.0	4.6	0.5	chr6	167651397	167652230	(3153749)	+	(GT)n	Simple_repeat	1	872	(0)	3554614
1863	14.6	5.8	0.3	chr7	1356511	1356791	(157989182)	C	AluSz	SINE/Alu	(13)	299	1	3559756
397	22.0	9.0	0.8	chr7	1356792	1356804	(157989169)	+	Charlie5	DNA/hAT-Charlie	2541	2553	(71)	3559755
356	27.6	4.3	5.0	chr7	1356811	1356951	(157989022)	+	L2b	LINE/L2	3205	3344	(31)	3559754
12	13.3	6.4	6.0	chr7	2354969	2355015	(156990958)	+	(CGC)n	Simple_repeat	1	50	(0)	3561252
1956	20.5	6.2	0.5	chr7	3176766	3177205	(156168768)	+	MLT1C	LTR/ERVL-MaLR	1	467	(0)	3562824
4244	18.2	3.0	4.1	chr7	4320372	4321371	(155024602)	C	L1MB7	LINE/L1	(11)	6571	5565	3564575
43610	7.1	1.1	10.8	chr7	5027170	5028260	(154317713)	C	Harlequin-int	LTR/ERV1	(5474)	1422	1	3566072
1463	18.8	9.5	2.5	chr7	6199521	6199967	(153146006)	+	L1MEc	LINE/L1	1659	2140	(4260)	3568787
220	32.1	4.5	3.6	chr7	6531467	6531576	(152814397)	C	L2c	LINE/L2	(185)	3190	3080	3569587
13	20.1	5.0	0.0	chr7	6706693	6706732	(152639241)	+	(CCG)n	Simple_repeat	1	42	(0)	3569975
1091	22.2	13.2	3.4	chr7	7155595	7156016	(152189957)	C	L1M8	LINE/L1	(798)	1557	1078	3570722
1045	28.5	4.2	6.8	chr7	7156061	7156429	(152189544)	+	L1MEg	LINE/L1	93	451	(5633)	3570724
2145	22.8	5.9	2.9	chr7	7581454	7582031	(151763942)	C	MLT1E1A	LTR/ERVL-MaLR	(62)	618	23	3571281
5759	8.8	6.5	0.0	chr7	11443939	11444763	(147901210)	+	L1PA6	LINE/L1	5273	6154	(0)	3576204
761	24.9	9.6	1.0	chr7	11755046	11755244	(147590729)	+	MER20	DNA/hAT-Charlie	1	218	(1)	3576566
1031	26.6	3.2	0.7	chr7	11755435	11755740	(147590233)	C	LTR16B1	LTR/ERVL	(41)	439	126	3576567
7713	18.7	2.4	0.4	chr7	13627501	13628906	(145717067)	C	ERVL-B4-int	LTR/ERVL	(0)	5714	4280	3578971
585	30.1	8.9	5.5	chr7	17781927	17782274	(141563699)	C	MER21C	LTR/ERVL	(96)	842	482	3584356
396	13.9	6.0	10.2	chr7	17782321	17782408	(141563565)	+	LTR54	LTR/ERV1	75	158	(352)	3584357
595	26.5	3.2	1.4	chr7	17782450	17782663	(141563310)	+	LTR54	LTR/ERV1	293	510	(0)	3584357
15	21.3	4.8	3.0	chr7	20798059	20798121	(138547852)	+	(GGCGCGGC)n	Simple_repeat	1	66	(0)	3588273
18	16.4	0.0	4.4	chr7	20798115	20798159	(138547814)	+	(GCCCC)n	Simple_repeat	1	45	(0)	3588274
13	13.0	5.6	2.6	chr7	20798416	20798451	(138547522)	+	(CTC)n	Simple_repeat	1	38	(0)	3588275
3957	7.4	1.5	0.0	chr7	23653708	23654222	(135691751)	+	LTR10G	LTR/ERV1	1	523	(0)	3592791
2503	19.2	4.1	6.6	chr7	23654248	23655475	(135690498)	+	HERVI-int	LTR/ERV1	26	1019	(6718)	3592791
55	0.0	0.0	0.0	chr7	26377019	26377065	(132968908)	+	(TG)n	Simple_repeat	1	47	(0)	3596951
230	27.9	21.2	1.0	chr7	30669633	30669835	(128676138)	+	L2c	LINE/L2	2706	2960	(459)	3603452
877	35.4	11.0	2.7	chr7	38819098	38820366	(120525607)	+	L2c	LINE/L2	1451	2838	(581)	3615678
9136	12.6	6.3	4.2	chr7	39577271	39578811	(119767162)	+	LTR12C	LTR/ERV1	3	1578	(1)	3616738
851	7.4	6.9	0.0	chr7	44848675	44848796	(114497177)	+	AluSx3	SINE/Alu	174	304	(7)	3625017
3704	24.5	8.9	3.8	chr7	48063518	48065823	(111280150)	+	L1MC4	LINE/L1	521	3020	(3194)	3629432
94	10.7	1.1	1.1	chr7	57495470	57495644	(101850329)	+	(GGAAT)n	Simple_repeat	1	177	(0)	3642547
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
383	14.3	3.1	0.0	chr7	65489887	65489949	(93856024)	C	AluYj4	SINE/Alu	(22)	289	225	3647903
85	11.3	0.7	0.6	chr7	65489965	65490119	(93855854)	+	(TTCCA)n	Simple_repeat	1	156	(0)	3647904
13	20.4	0.0	2.8	chr7	65509965	65510000	(93835973)	+	(GCG)n	Simple_repeat	1	36	(0)	3647931
12	20.9	6.8	0.0	chr7	66740842	66740885	(92605088)	+	G-rich	Low_complexity	1	47	(0)	3650717
2328	10.0	0.7	0.0	chr7	67020748	67021047	(92324926)	+	AluSx1	SINE/Alu	1	302	(10)	3651352
936	25.8	13.0	1.9	chr7	69198716	69199166	(90146807)	C	LTR50	LTR/ERVL	(0)	795	198	3656117
739	34.1	7.8	10.0	chr7	70076503	70076871	(89269102)	+	L3	LINE/CR1	3036	3437	(662)	3657815
318	22.3	3.4	9.0	chr7	70495526	70497356	(88848617)	+	(CGCACA)n	Simple_repeat	1	1893	(0)	3658384
5921	21.6	7.8	7.7	chr7	77977625	77978267	(81367706)	C	L1ME1	LINE/L1	(5621)	779	107	3674795
331	31.2	14.3	1.4	chr7	88389698	88389843	(70956130)	+	MIR	SINE/MIR	15	182	(80)	3688488
2136	12.9	9.1	0.3	chr7	88389849	88390190	(70955783)	C	THE1C	LTR/ERVL-MaLR	(0)	375	1	3688489
244	23.6	5.2	0.0	chr7	92433527	92433581	(66912392)	+	L2b	LINE/L2	3316	3373	(2)	3693872
388	24.2	4.9	13.3	chr7	96039589	96039836	(63306137)	C	L1ME3G	LINE/L1	(8)	916	691	3698806
12	22.4	0.0	2.6	chr7	98617086	98617123	(60728850)	+	(CTCACG)n	Simple_repeat	1	38	(0)	3702996
13	13.8	8.1	7.5	chr7	98617438	98617511	(60728462)	+	(GCTGGC)n	Simple_repeat	1	80	(0)	3702997
28	0.0	0.0	3.2	chr7	103989357	103989387	(55356586)	+	(GCC)n	Simple_repeat	1	31	(0)	3713457
12	23.3	2.5	0.0	chr7	103989467	103989506	(55356467)	+	G-rich	Low_complexity	1	41	(0)	3713458
13	13.9	4.7	4.4	chr7	103989554	103989596	(55356377)	+	G-rich	Low_complexity	1	45	(0)	3713458
15	18.8	2.2	4.3	chr7	103989605	103989650	(55356323)	+	(GCC)n	Simple_repeat	1	47	(0)	3713459
12	23.8	3.9	1.9	chr7	103989866	103989916	(55356057)	+	(GGACGG)n	Simple_repeat	1	53	(0)	3713460
1100	23.2	17.1	2.6	chr7	105298040	105298546	(54047427)	C	L1ME1	LINE/L1	(30)	6149	5577	3715485
419	21.6	0.0	1.4	chr7	105298547	105298620	(54047353)	+	AluJr	SINE/Alu	52	124	(188)	3715487
398	29.9	16.0	5.2	chr7	115054531	115054943	(44291030)	+	L2a	LINE/L2	2707	3171	(255)	3729194
233	21.3	0.0	7.6	chr7	115055053	115055118	(44290855)	+	L2a	LINE/L2	3319	3379	(8)	3729194
1070	31.6	5.7	3.9	chr7	115485222	115485706	(43860267)	C	MLT1H1	LTR/ERVL-MaLR	(61)	494	1	3729821
15	21.1	1.9	3.7	chr7	116210745	116210797	(43135176)	+	(GCGCGCG)n	Simple_repeat	1	54	(0)	3730740
367	29.3	8.9	2.0	chr7	117065001	117065204	(42280769)	C	MIRc	SINE/MIR	(10)	258	33	3732032
12	12.4	8.6	0.0	chr7	117322933	117322967	(42023006)	+	(GAGCCA)n	Simple_repeat	1	38	(0)	3732387
262	22.4	0.0	0.0	chr7	121050388	121050436	(38295537)	C	LTR88b	LTR/Gypsy?	(17)	820	772	3737165
2462	8.2	0.3	0.3	chr7	121050461	121050763	(38295210)	C	AluSq2	SINE/Alu	(10)	303	1	3737166
19	32.7	0.0	1.2	chr7	129225229	129225309	(30120664)	+	(GGCCCC)n	Simple_repeat	1	81	(0)	3748760
16	15.0	0.0	4.9	chr7	129780249	129780289	(29565684)	+	(CGCCCCG)n	Simple_repeat	1	41	(0)	3749820
13	10.0	0.0	0.0	chr7	129780818	129780839	(29565134)	+	(GCC)n	Simple_repeat	1	22	(0)	3749821
260	31.2	6.8	0.0	chr7	131618530	131618625	(27727348)	+	L2b	LINE/L2	3069	3171	(204)	3753157
290	35.2	3.7	4.3	chr7	131618913	131619075	(27726898)	+	MIRc	SINE/MIR	44	205	(63)	3753158
271	31.1	7.0	6.9	chr7	134302830	134303322	(25042651)	+	X7B_LINE	LINE/CR1	13	904	(176)	3757245
2993	29.1	2.0	2.5	chr7	136615429	136616023	(22729950)	C	L1M4b	LINE/L1	(6032)	835	250	3760845
4878	14.5	3.1	0.7	chr7	136626915	136628431	(22717542)	C	L1MA6	LINE/L1	(319)	7400	5830	3760862
2273	11.5	0.3	1.3	chr7	138785268	138785579	(20560394)	C	AluSz	SINE/Alu	(3)	309	1	3764320
26	8.8	0.0	0.0	chr7	138785734	138785769	(20560204)	+	(CA)n	Simple_repeat	1	36	(0)	3764321
204	27.5	9.2	1.8	chr7	140363764	140363874	(18982099)	C	L2c	LINE/L2	(358)	3029	2910	3767246
1952	14.7	2.0	0.3	chr7	140363975	140364266	(18981707)	+	AluSx	SINE/Alu	1	297	(15)	3767250
2084	26.9	5.6	2.6	chr7	140599960	140600757	(18745216)	C	L2	LINE/L2	(729)	2690	1868	3767844
50	23.2	0.0	0.0	chr7	140640090	140640196	(18705777)	+	(CA)n	Simple_repeat	1	107	(0)	3767936
15	20.6	0.0	4.2	chr7	140640622	140640669	(18705304)	+	(GCCCTCC)n	Simple_repeat	1	48	(0)	3767937
13	21.9	3.9	3.7	chr7	140697490	140697542	(18648431)	+	GA-rich	Low_complexity	1	53	(0)	3768042
237	18.4	2.0	0.0	chr7	141575563	141575611	(17770362)	+	MIR3	SINE/MIR	150	199	(9)	3769512
31	0.0	0.0	0.0	chr7	141575655	141575683	(17770290)	+	(T)n	Simple_repeat	1	29	(0)	3769513
1960	21.8	3.0	2.2	chr7	141592118	141592618	(17753355)	C	MLT1D	LTR/ERVL-MaLR	(0)	505	1	3769531
1813	26.5	4.1	3.5	chr7	147054990	147055461	(12290512)	+	LTR80A	LTR/ERVL	1	480	(103)	3776751
2309	29.7	9.7	1.8	chr7	148548044	148548849	(10797124)	+	L2	LINE/L2	633	1528	(1891)	3778979
3136	21.2	8.4	3.5	chr7	148548850	148549725	(10796248)	+	L1ME1	LINE/L1	5230	6151	(28)	3778981
2044	16.8	1.5	0.6	chr7	149537940	149538280	(9807693)	+	MLT1A0	LTR/ERVL-MaLR	1	344	(21)	3780827
3613	21.7	2.2	4.0	chr7	149538328	149539175	(9806798)	C	MER21C	LTR/ERVL	(6)	932	8	3780828
328	16.4	7.8	3.8	chr7	150003183	150004275	(9341698)	+	(GT)n	Simple_repeat	1	1178	(0)	3781444
13	24.6	2.3	0.0	chr7	152436347	152436389	(6909584)	+	(GCTC)n	Simple_repeat	1	44	(0)	3785121
29	0.0	0.0	0.0	chr7	152436749	152436775	(6909198)	+	(CTCCGG)n	Simple_repeat	1	27	(0)	3785122
297	32.8	10.0	6.2	chr7	154822682	154822987	(4522986)	+	L2a	LINE/L2	3108	3426	(0)	3788786
13	11.8	14.7	2.6	chr7	155942251	155942318	(3403655)	+	(CACATG)n	Simple_repeat	1	78	(0)	3790291
13	18.9	2.8	0.0	chr7	156101237	156101272	(3244701)	+	A-rich	Low_complexity	1	37	(0)	3790492
202	20.1	3.6	1.2	chr7	156101284	156101781	(3244192)	+	(GT)n	Simple_repeat	1	516	(0)	3790493
225	21.2	6.9	2.5	chr7	156237372	156238187	(3107786)	+	(TG)n	Simple_repeat	1	872	(0)	3790663
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
19	17.1	1.7	5.1	chr8	17801486	17801543	(127337093)	+	(CGCTCC)n	Simple_repeat	1	59	(0)	3818737
12	14.4	0.0	0.0	chr8	30095456	30095479	(115043157)	+	(GCC)n	Simple_repeat	1	24	(0)	3839029
298	29.8	0.8	2.1	chr8	38502520	38503544	(106635092)	+	(GT)n	Simple_repeat	1	1033	(0)	3852412
25	18.1	1.3	5.2	chr8	38787224	38787299	(106351337)	+	G-rich	Low_complexity	1	77	(0)	3852979
14	8.9	11.1	0.0	chr8	48008411	48008446	(97130190)	+	(GTGC)n	Simple_repeat	1	40	(0)	3862762
773	32.4	6.3	2.0	chr8	49209629	49210034	(95928602)	C	LTR16A	LTR/ERVL	(16)	435	11	3864163
2077	15.0	11.4	0.8	chr8	50219426	50219807	(94918829)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3865379
409	32.2	7.9	0.0	chr8	50219867	50220065	(94918571)	+	L1MEd	LINE/L1	2318	2533	(3613)	3865378
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
31	32.4	0.0	0.0	chr8	64581360	64581463	(80557173)	+	(CGG)n	Simple_repeat	1	104	(0)	3884658
32	0.0	0.0	0.0	chr8	64581464	64581493	(80557143)	+	(GCA)n	Simple_repeat	1	30	(0)	3884659
8470	20.6	6.2	2.3	chr8	77575038	77580183	(67558453)	+	L1MA3	LINE/L1	2340	7724	(0)	3903684
35	5.0	0.0	0.0	chr8	90985245	90985286	(54153350)	+	(GGCGGGG)n	Simple_repeat	1	42	(0)	3921892
20	10.5	2.2	4.3	chr8	93917509	93917553	(51221083)	+	G-rich	Low_complexity	1	46	(0)	3926056
14	17.8	5.3	0.0	chr8	93917771	93917808	(51220828)	+	(CGC)n	Simple_repeat	1	40	(0)	3926057
531	27.2	8.0	1.2	chr8	94948251	94948414	(50190222)	+	MIR	SINE/MIR	76	251	(11)	3927876
13	20.9	0.0	4.8	chr8	94948596	94948637	(50189999)	+	G-rich	Low_complexity	1	42	(0)	3927877
24	8.5	5.6	3.5	chr8	94948744	94948797	(50189839)	+	GA-rich	Low_complexity	1	57	(0)	3927878
18	29.3	0.0	0.0	chr8	94949388	94949445	(50189191)	+	(GCCGC)n	Simple_repeat	1	58	(0)	3927879
14	29.1	0.0	3.5	chr8	100310098	100310155	(44828481)	+	(CCT)n	Simple_repeat	1	58	(0)	3936538
13	21.2	2.1	4.2	chr8	102655686	102655732	(42482904)	+	(CGC)n	Simple_repeat	1	48	(0)	3940827
11	24.1	0.0	0.0	chr8	102655765	102655798	(42482838)	+	G-rich	Low_complexity	1	34	(0)	3940828
18098	10.3	1.6	4.5	chr8	103585925	103587399	(41551237)	+	L1MA1	LINE/L1	3734	5113	(2452)	3942538
370	24.2	0.0	2.1	chr8	118138258	118138300	(27000336)	C	LTR67B	LTR/ERVL	(20)	483	462	3962769
1794	21.3	0.3	0.3	chr8	118138301	118138662	(26999974)	+	MLT1A0	LTR/ERVL-MaLR	2	363	(2)	3962770
4649	17.7	3.0	8.8	chr8	127033540	127034366	(18104270)	+	L1MC1	LINE/L1	5578	6322	(11)	3978630
696	28.1	2.1	0.0	chr8	127034611	127034795	(18103841)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	3978636
11311	15.2	2.4	1.0	chr8	140809962	140813418	(4325218)	+	L1PA13	LINE/L1	95	3640	(3126)	4002627
21	13.7	0.0	7.1	chr8	141128535	141128590	(4010046)	+	(GCCCC)n	Simple_repeat	1	56	(0)	4003236
13	21.5	3.4	4.9	chr8	141128648	141128706	(4009930)	+	G-rich	Low_complexity	1	61	(0)	4003237
19897	11.9	1.6	0.8	chr8	143005318	143008279	(2130357)	C	L1PA13	LINE/L1	(2708)	4058	1050	4005570
1939	13.1	2.6	5.6	chr8	143310949	143311268	(1827368)	C	AluSz	SINE/Alu	(2)	310	1	4006057
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
12	17.6	3.1	0.0	chr8	144147411	144147442	(991194)	+	(CCTCCG)n	Simple_repeat	1	33	(0)	4007189
2326	9.4	0.0	0.0	chr8	144798184	144798482	(340154)	+	AluSq2	SINE/Alu	1	299	(14)	4008118
15	16.3	0.0	2.8	chr9	4299650	4299685	(134095032)	+	(GGCGGA)n	Simple_repeat	1	36	(0)	4014805
4483	24.4	3.5	1.2	chr9	8070881	8071916	(130322801)	C	L1PA16	LINE/L1	(5442)	1061	2	4020613
257	24.1	2.5	7.1	chr9	21901878	21901962	(116492755)	C	L4_B_Mam	LINE/RTE-X	(184)	4757	4677	4039841
405	31.8	3.5	1.8	chr9	21902032	21902255	(116492462)	C	MLT1N2	LTR/ERVL-MaLR	(4)	558	331	4039842
254	25.8	0.0	1.6	chr9	21902330	21902392	(116492325)	C	MLT1N2	LTR/ERVL-MaLR	(396)	166	105	4039842
264	32.2	10.8	5.5	chr9	28631874	28632175	(109762542)	C	L2a	LINE/L2	(0)	3426	3056	4048849
22	23.6	1.4	2.7	chr9	34958018	34958090	(103436627)	+	(GCCGCCC)n	Simple_repeat	1	74	(0)	4058166
34	0.0	0.0	0.0	chr9	34958227	34958257	(103436460)	+	(CGC)n	Simple_repeat	1	31	(0)	4058167
296	22.0	5.7	2.5	chr9	41229379	41230391	(97164326)	+	(TG)n	Simple_repeat	1	1071	(0)	4068370
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
235	23.8	4.5	3.8	chr9	63823016	63823908	(74570809)	+	(CA)n	Simple_repeat	1	933	(0)	4074777
51	25.2	3.4	3.8	chr9	69325390	69325595	(69069122)	+	(CGC)n	Simple_repeat	1	213	(0)	4081448
532	27.1	3.3	2.8	chr9	71929848	71930015	(66464702)	+	MIRc	SINE/MIR	26	194	(74)	4085530
1498	26.2	10.2	2.4	chr9	73841632	73842224	(64552493)	+	Kanga1b	DNA/TcMar-Tc2	126	770	(9)	4088595
16	3.9	0.0	6.7	chr9	76388896	76388925	(62005792)	+	(AAAC)n	Simple_repeat	1	30	(0)	4092444
6366	7.1	2.6	0.1	chr9	79539731	79540659	(58854058)	+	L1PA8	LINE/L1	5206	6157	(15)	4097409
963	20.9	9.6	2.0	chr9	79803565	79803862	(58590855)	+	Kanga1c	DNA/TcMar-Tc2	15	337	(392)	4097776
654	21.8	12.7	0.0	chr9	79803866	79804044	(58590673)	+	Kanga1	DNA/TcMar-Tc2	1163	1367	(378)	4097777
887	21.0	6.2	0.0	chr9	84290380	84290546	(54104171)	+	MER5A	DNA/hAT-Charlie	8	185	(4)	4104399
260	27.4	17.0	3.0	chr9	87275280	87275576	(51119141)	C	L2a	LINE/L2	(41)	3385	3039	4109212
4177	25.7	6.9	6.6	chr9	90789075	90790421	(47604296)	+	L1MB8	LINE/L1	10	1352	(5515)	4114301
27	3.5	0.0	0.0	chr9	92764802	92764831	(45629886)	+	(GCC)n	Simple_repeat	1	30	(0)	4117178
15	23.4	3.4	3.3	chr9	92764841	92764899	(45629818)	+	(CGCC)n	Simple_repeat	1	61	(0)	4117179
3229	18.7	6.6	0.3	chr9	94154391	94155097	(44239620)	+	L1MEc	LINE/L1	285	1039	(5361)	4119100
257	33.5	2.1	3.6	chr9	94640991	94641185	(43753532)	C	L2-1_AMi	LINE/L2	(601)	634	443	4119987
252	25.0	0.0	0.0	chr9	94641186	94641237	(43753480)	C	L2a	LINE/L2	(1031)	2388	2337	4119986
402	25.4	7.6	1.5	chr9	94641260	94641395	(43753322)	C	L2a	LINE/L2	(1268)	2151	2007	4119986
2067	13.1	1.3	0.0	chr9	96151251	96151555	(42243162)	+	AluSg	SINE/Alu	1	309	(1)	4122307
2398	10.7	0.0	0.0	chr9	97767061	97767368	(40627349)	+	AluSx	SINE/Alu	1	308	(4)	4125090
1115	14.5	2.5	3.5	chr9	97767369	97767507	(40627210)	C	MER3	DNA/hAT-Charlie	(57)	152	12	4125089
245	25.7	5.6	5.5	chr9	105243999	105244113	(33150604)	+	MIRc	SINE/MIR	73	179	(29)	4137222
21	24.1	0.0	1.7	chr9	105244524	105244583	(33150134)	+	G-rich	Low_complexity	1	60	(0)	4137223
12	18.4	5.4	0.0	chr9	108933745	108933781	(29460936)	+	(GCAGCCC)n	Simple_repeat	1	39	(0)	4143525
31	11.6	4.3	2.8	chr9	112486782	112486850	(25907867)	+	(CCCCG)n	Simple_repeat	1	72	(0)	4149957
355	18.0	5.3	2.2	chr9	115863898	115863988	(22530729)	+	L1PA17	LINE/L1	6073	6166	(0)	4156291
199	37.5	6.2	3.5	chr9	116435609	116435749	(21958968)	+	L2b	LINE/L2	3040	3184	(203)	4157385
277	26.2	0.0	1.6	chr9	116435769	116435830	(21958887)	+	MER5A1	DNA/hAT-Charlie	1	61	(105)	4157386
548	13.1	4.8	0.0	chr9	116435881	116435979	(21958738)	+	MER5A1	DNA/hAT-Charlie	63	166	(0)	4157387
342	26.8	8.6	8.6	chr9	116436018	116436156	(21958561)	+	L2b	LINE/L2	3244	3387	(0)	4157385
323	27.8	0.2	0.6	chr9	121806528	121807395	(16587322)	+	(TG)n	Simple_repeat	1	870	(0)	4167731
19	16.8	0.0	5.8	chr9	122228580	122228631	(16166086)	+	(CCCGG)n	Simple_repeat	1	52	(0)	4168588
25	20.1	0.0	3.0	chr9	122228850	122228915	(16165802)	+	(GGCCCC)n	Simple_repeat	1	66	(0)	4168589
37	22.7	0.0	0.0	chr9	122228971	122229053	(16165664)	+	(CCT)n	Simple_repeat	1	83	(0)	4168590
20	30.4	0.0	2.9	chr9	122229146	122229214	(16165503)	+	(AC)n	Simple_repeat	1	69	(0)	4168591
16	21.4	1.9	3.8	chr9	122941035	122941086	(15453631)	+	(GGC)n	Simple_repeat	1	53	(0)	4169822
12	7.5	6.7	3.1	chr9	122941107	122941136	(15453581)	+	(TCC)n	Simple_repeat	1	32	(0)	4169823
2165	10.6	0.3	0.0	chr9	124787523	124787858	(13606859)	C	AluSz	SINE/Alu	(0)	312	1	4173224
361	27.3	2.0	1.0	chr9	124787866	124787965	(13606752)	C	MIRb	SINE/MIR	(79)	189	89	4173225
402	29.7	16.9	1.9	chr9	125658063	125658223	(12736494)	+	MIR3	SINE/MIR	19	208	(0)	4175055
1807	18.3	3.2	0.0	chr9	126215228	126215527	(12179190)	C	AluJr	SINE/Alu	(2)	310	1	4176062
915	23.2	7.2	9.8	chr9	126215528	126215596	(12179121)	+	L2a	LINE/L2	2258	2323	(1096)	4176059
1421	24.9	5.0	0.0	chr9	126215597	126215997	(12178720)	+	L2a	LINE/L2	2910	3331	(95)	4176059
31	27.1	1.4	5.6	chr9	127785379	127785520	(10609197)	+	(GGC)n	Simple_repeat	1	144	(0)	4179013
26	9.9	0.0	0.0	chr9	127785879	127785921	(10608796)	+	(GGC)n	Simple_repeat	1	43	(0)	4179014
18	15.7	3.0	7.3	chr9	131277003	131277068	(7117649)	+	(GCGGCGC)n	Simple_repeat	1	68	(0)	4186721
16	24.9	1.9	0.0	chr9	131277715	131277766	(7116951)	+	G-rich	Low_complexity	1	53	(0)	4186722
340	26.7	4.6	9.8	chr9	131729677	131729859	(6664858)	+	MIRb	SINE/MIR	95	267	(1)	4187571
1433	16.8	2.3	1.6	chr9	132354270	132354525	(6040192)	+	AluJr	SINE/Alu	55	312	(0)	4188726
701	32.0	6.7	3.6	chr9	132643123	132643242	(5751475)	C	L1ME4a	LINE/L1	(389)	5735	5616	4189248
804	21.2	6.7	2.2	chr9	132643527	132643753	(5750964)	C	MIR	SINE/MIR	(3)	259	22	4189250
209	31.2	8.2	0.0	chr9	132877843	132877943	(5516774)	C	MIRc	SINE/MIR	(119)	149	41	4189656
13	21.3	1.6	7.8	chr9	132878302	132878364	(5516353)	+	(CGCCG)n	Simple_repeat	1	64	(0)	4189657
200	17.8	1.2	0.0	chr9	132878628	132878677	(5516040)	+	MIR1_Amn	SINE/MIR	110	161	(47)	4189658
1867	22.5	1.7	0.0	chr9	133079657	133079871	(5314846)	C	HERV3-int	LTR/ERV1	(5950)	2476	2262	4190027
30	0.0	0.0	0.0	chr9	133079872	133079899	(5314818)	+	(T)n	Simple_repeat	1	28	(0)	4190028
1867	22.5	1.7	0.0	chr9	133079900	133080083	(5314634)	C	HERV3-int	LTR/ERV1	(6165)	2261	2071	4190027
21	16.3	1.7	4.9	chr9	133460213	133460272	(4934445)	+	(CCCGC)n	Simple_repeat	1	61	(0)	4190625
286	8.8	9.5	2.4	chr9	134182441	134183092	(4211625)	+	(TG)n	Simple_repeat	1	714	(0)	4191688
16	25.3	2.2	6.5	chr9	134641567	134641656	(3753061)	+	(CCGCC)n	Simple_repeat	1	92	(0)	4192278
24	16.6	3.7	0.0	chr9	134641876	134641939	(3752778)	+	GA-rich	Low_complexity	1	66	(0)	4192279
15	29.2	4.5	0.0	chr9	134642226	134642240	(3752477)	+	(CCG)n	Simple_repeat	1	27	(43)	4192280
19	10.5	0.0	0.0	chr9	134642241	134642271	(3752446)	+	(GCT)n	Simple_repeat	1	31	(0)	4192281
13	12.1	3.6	0.0	chr9	136687065	136687092	(1707625)	+	G-rich	Low_complexity	1	29	(0)	4194649
19	14.1	2.6	0.0	chr9	136687298	136687336	(1707381)	+	(CAG)n	Simple_repeat	1	40	(0)	4194650
24	28.0	1.3	0.0	chr9	136687441	136687517	(1707200)	+	G-rich	Low_complexity	1	78	(0)	4194651
31	27.9	2.0	4.6	chr9	136687516	136687665	(1707052)	+	(CGCCC)n	Simple_repeat	1	153	(0)	4194652
379	13.6	6.3	3.7	chr9	137900401	137901391	(493326)	+	(TGTGTC)n	Simple_repeat	1	1053	(0)	4196300
895	10.5	0.0	3.2	chr9	137901397	137901520	(493197)	C	AluSx	SINE/Alu	(87)	225	106	4196301
370	27.8	3.8	7.2	chr9	137901525	137901675	(493042)	C	L1ME4c	LINE/L1	(408)	422	272	4196302
33	2.7	0.0	2.5	chrX	3697020	3697059	(152343836)	+	(AAAC)n	Simple_repeat	1	40	(0)	4365384
1755	18.7	0.0	3.9	chrX	3697074	3697383	(152343512)	+	AluJb	SINE/Alu	3	300	(12)	4365385
15186	16.0	1.7	2.1	chrX	7633845	7634718	(148406177)	+	L1P4a	LINE/L1	2529	3391	(3092)	4371971
441	29.6	17.6	3.0	chrX	12605382	12605990	(143434905)	+	L2a	LINE/L2	2631	3379	(47)	4379795
273	33.0	0.0	5.0	chrX	12606032	12606130	(143434765)	+	MIR	SINE/MIR	167	260	(2)	4379796
1043	18.8	9.6	14.1	chrX	13884192	13884299	(142156596)	+	MER33	DNA/hAT-Charlie	224	324	(0)	4381912
1723	16.2	9.7	9.1	chrX	16570639	16570688	(139470207)	+	MER31B	LTR/ERV1	426	465	(1)	4386240
1260	18.8	3.4	5.8	chrX	16570718	16570745	(139470150)	+	MER33	DNA/hAT-Charlie	1	27	(297)	4386243
4776	12.9	5.0	6.0	chrX	16570746	16571552	(139469343)	+	LTR1A1	LTR/ERV1	1	799	(0)	4386244
12	35.7	0.0	2.7	chrX	16786742	16786815	(139254080)	+	(GGTGG)n	Simple_repeat	1	74	(0)	4386712
13	21.0	5.9	1.9	chrX	19514995	19515045	(136525850)	+	(CCG)n	Simple_repeat	1	54	(0)	4391495
27	30.3	0.9	2.7	chrX	19515085	19515194	(136525701)	+	(CCG)n	Simple_repeat	1	111	(0)	4391495
23	8.2	2.6	0.0	chrX	19515659	19515697	(136525198)	+	(GTTTTTT)n	Simple_repeat	1	40	(0)	4391496
347	29.4	1.6	4.0	chrX	19544360	19544483	(136496412)	C	MIRc	SINE/MIR	(122)	146	26	4391548
2790	26.7	12.4	3.8	chrX	20629677	20630831	(135410064)	C	FordPrefect	DNA/hAT-Tip100	(371)	1312	56	4393477
22021	10.7	1.0	1.6	chrX	20695237	20699371	(135341524)	+	L1PA16	LINE/L1	2730	6882	(0)	4393578
532	25.0	17.2	3.9	chrX	21839011	21839293	(134201602)	+	L1ME2	LINE/L1	5843	6163	(1)	4395015
19	17.6	2.2	0.0	chrX	24025694	24025738	(132015157)	+	G-rich	Low_complexity	1	46	(0)	4398623
12	14.3	4.8	4.5	chrX	24025746	24025787	(132015108)	+	(GTCCCGC)n	Simple_repeat	1	44	(0)	4398624
2729	12.4	0.9	9.1	chrX	30788554	30799929	(125240966)	+	(GCCTT)n	Simple_repeat	1	10415	(0)	4408794
2168	12.4	0.0	0.0	chrX	33020392	33020674	(123020221)	+	AluSz	SINE/Alu	1	283	(29)	4412033
196	28.8	4.9	1.5	chrX	33020954	33021040	(123019855)	+	L2c	LINE/L2	3264	3356	(19)	4412034
364	25.7	13.9	0.0	chrX	35920474	35920578	(120120317)	C	L2a	LINE/L2	(9)	3417	3296	4415738
22	21.1	0.0	0.0	chrX	49269819	49269867	(106771028)	+	(GCC)n	Simple_repeat	1	49	(0)	4437810
18	8.3	4.8	4.5	chrX	49270064	49270105	(106770790)	+	(GGC)n	Simple_repeat	1	44	(0)	4437811
18	32.0	1.4	0.0	chrX	49270086	49270158	(106770737)	+	GA-rich	Low_complexity	1	74	(0)	4437812
15	11.6	0.0	3.3	chrX	53094243	53094272	(102946623)	+	(GCG)n	Simple_repeat	1	30	(0)	4443030
626	21.1	1.3	6.2	chrX	68899748	68899858	(87141037)	C	L2a	LINE/L2	(0)	3426	3320	4457174
1816	15.5	0.0	7.4	chrX	68899859	68900033	(87140862)	C	AluJr	SINE/Alu	(1)	311	139	4457175
11209	13.2	2.5	2.4	chrX	70829503	70830402	(85210493)	+	L1MA9	LINE/L1	3078	3942	(3623)	4460242
5966	12.0	2.5	3.0	chrX	70830402	70831346	(85209549)	+	L1MA9	LINE/L1	6493	7451	(280)	4460242
246	30.8	5.7	7.1	chrX	72018233	72018428	(84022467)	+	MIRb	SINE/MIR	8	200	(68)	4462538
1704	30.0	7.4	4.6	chrX	72246004	72246997	(83793898)	+	L2b	LINE/L2	2336	3362	(13)	4462969
5178	23.9	4.4	2.5	chrX	73391347	73392587	(82648308)	+	L1PA13	LINE/L1	1028	2299	(4486)	4464439
6625	7.7	0.7	0.1	chrX	73595181	73596144	(82444751)	C	L1PA7	LINE/L1	(6)	6148	5181	4464615
6365	9.9	0.1	0.1	chrX	73596145	73597065	(82443830)	+	L1PA7	LINE/L1	4258	5178	(968)	4464615
2898	16.4	5.5	10.5	chrX	76153352	76154087	(79886808)	+	MER50B	LTR/ERV1	1	697	(0)	4467301
2570	19.0	2.8	0.0	chrX	77776434	77776912	(78263983)	C	Tigger9b	DNA/TcMar-Tigger	(1)	623	131	4468823
974	23.9	2.3	4.9	chrX	77776921	77777083	(78263812)	C	MER58A	DNA/hAT-Charlie	(6)	218	55	4468824
2007	10.1	0.0	9.1	chrX	77777084	77777380	(78263515)	+	AluSx1	SINE/Alu	13	282	(30)	4468825
4190	28.2	3.8	0.8	chrX	80531654	80533113	(75507782)	C	L1ME3A	LINE/L1	(1149)	4997	3493	4471920
2314	23.1	2.7	0.9	chrX	80533137	80533682	(75507213)	+	Tigger6b	DNA/TcMar-Tigger	1	556	(1041)	4471927
4835	13.4	0.6	5.2	chrX	81229143	81229963	(74810932)	C	LTR1	LTR/ERV1	(0)	783	1	4472656
535	28.7	6.7	3.0	chrX	81229969	81230169	(74810726)	+	MIRc	SINE/MIR	3	211	(57)	4472657
211	33.6	6.9	5.4	chrX	81273387	81273515	(74767380)	+	L2b	LINE/L2	3237	3367	(8)	4472708
55637	4.8	0.8	0.2	chrX	84945143	84946535	(71094360)	+	Harlequin-int	LTR/ERV1	1	1401	(5495)	4476449
9502	15.4	3.3	1.2	chrX	85742858	85745082	(70295813)	+	L1PA15	LINE/L1	3513	5788	(377)	4477297
10039	16.1	5.3	2.7	chrX	86442389	86444089	(69596806)	C	L1MA6	LINE/L1	(835)	5483	3746	4478077
1656	19.1	2.0	1.7	chrX	86444090	86444388	(69596507)	C	AluJr	SINE/Alu	(11)	301	2	4478082
12215	9.6	1.2	1.6	chrX	100266528	100269562	(55771333)	+	L1PA7	LINE/L1	2	3055	(3406)	4494084
233	37.9	4.6	0.0	chrX	101881440	101881563	(54159332)	C	L3b	LINE/CR1	(1019)	3080	2951	4496594
410	31.4	5.1	8.2	chrX	102862772	102863114	(53177781)	C	L1MC4	LINE/L1	(3340)	2874	2543	4497747
626	27.3	3.9	4.6	chrX	102863146	102863533	(53177362)	C	L1MC4	LINE/L1	(3719)	2496	2112	4497747
23870	7.6	1.2	1.2	chrX	107953579	107956660	(48084235)	C	L1PA8	LINE/L1	(15)	6342	3275	4505099
270	35.6	6.9	0.7	chrX	108185838	108185987	(47854908)	C	L2c	LINE/L2	(223)	3164	3005	4505407
7227	18.8	3.5	1.4	chrX	112712158	112713226	(43327669)	C	L1MB7	LINE/L1	(5481)	2036	945	4511768
1063	25.9	5.2	2.0	chrX	114509391	114509796	(41531099)	+	L1MC5	LINE/L1	8874	9293	(11)	4514187
5266	15.6	2.1	0.6	chrX	116607460	116608436	(39432459)	+	L1M4c	LINE/L1	2455	3446	(2930)	4516843
2302	19.2	0.2	2.3	chrX	119572361	119572787	(36468108)	+	MLT1E3	LTR/ERVL-MaLR	1	418	(206)	4521358
1307	18.1	5.1	2.5	chrX	121504174	121504512	(34536383)	C	MSTB	LTR/ERVL-MaLR	(7)	421	1	4524505
557	25.4	4.5	3.5	chrX	121504513	121504773	(34536122)	C	L1ME1	LINE/L1	(3131)	3015	2752	4524504
3801	22.2	4.0	1.8	chrX	122291622	122293065	(33747830)	C	L1M4b	LINE/L1	(2847)	4159	2803	4525326
423	29.8	3.1	0.8	chrX	123117868	123117992	(32922903)	C	L2c	LINE/L2	(2112)	1307	1180	4526281
919	30.0	4.6	3.1	chrX	123117993	123118381	(32922514)	C	L2c	LINE/L2	(2418)	1001	607	4526281
2238	9.6	0.3	1.6	chrX	123721510	123721812	(32319083)	+	AluSz	SINE/Alu	7	305	(7)	4527176
1091	18.7	3.9	3.1	chrX	123721815	123722068	(32318827)	+	Charlie1a	DNA/hAT-Charlie	331	586	(869)	4527177
5270	5.7	2.6	0.9	chrX	123722069	123722740	(32318155)	+	L1PA8	LINE/L1	5485	6168	(4)	4527178
365	34.1	5.9	10.9	chrX	124286305	124286953	(31753942)	+	L2	LINE/L2	1924	2537	(882)	4528434
429	27.6	11.2	3.4	chrX	124286963	124287176	(31753719)	C	MER102b	DNA/hAT-Charlie	(65)	276	72	4528435
6979	15.6	4.1	1.7	chrX	126457717	126459582	(29581313)	+	L1MA2	LINE/L1	2715	4759	(2806)	4531179
1537	12.4	3.1	0.0	chrX	126459581	126459938	(29580957)	+	L1MA2	LINE/L1	6524	6890	(831)	4531179
19344	14.7	2.9	1.8	chrX	126900917	126905967	(29134928)	+	L1PREC2	LINE/L1	998	6111	(669)	4531680
5404	17.7	1.9	5.2	chrX	132508708	132510060	(23530835)	+	L1MB7	LINE/L1	2782	4089	(2555)	4539445
2255	10.5	0.3	0.0	chrX	133182532	133182826	(22858069)	C	AluSx1	SINE/Alu	(16)	296	1	4540470
532	31.2	3.6	1.8	chrX	133445159	133445377	(22595518)	+	MIRb	SINE/MIR	20	242	(26)	4540943
2439	7.0	0.3	0.0	chrX	133672951	133673237	(22367658)	C	AluSg7	SINE/Alu	(21)	288	1	4541389
397	25.9	2.1	0.0	chrX	133673273	133673364	(22367531)	C	MIR3	SINE/MIR	(15)	193	99	4541390
3931	22.4	5.1	2.1	chrX	135492217	135493379	(20547516)	+	L1ME1	LINE/L1	3526	4724	(1422)	4544428
16	23.4	2.9	4.2	chrX	135985459	135985528	(20055367)	+	G-rich	Low_complexity	1	72	(0)	4545166
34	21.0	0.0	0.0	chrX	138683373	138683439	(17357456)	+	(AC)n	Simple_repeat	1	67	(0)	4549604
337	33.5	4.3	5.5	chrX	143839187	143839484	(12201411)	C	L2a	LINE/L2	(4)	3422	3110	4557099
388	27.9	2.2	2.9	chrX	145163963	145164111	(10876784)	C	LTR16A	LTR/ERVL	(0)	456	314	4558791
14175	20.3	4.4	2.1	chrX	147159368	147165166	(8875729)	C	L1MA4	LINE/L1	(4)	7715	1776	4561453
704	28.3	2.8	0.0	chrX	148632747	148632919	(7407976)	C	MIR3	SINE/MIR	(1)	207	30	4563597
56	6.3	0.0	0.0	chrX	149631714	149631781	(6409114)	+	(CCG)n	Simple_repeat	1	68	(0)	4564868
903	26.0	7.9	1.6	chrX	150332948	150333197	(5707698)	C	LTR16E2	LTR/ERVL	(0)	568	302	4565745
479	27.3	11.0	3.1	chrX	150333362	150333652	(5707243)	+	L1ME4a	LINE/L1	5806	6122	(2)	4565744
13	12.4	5.4	2.6	chrX	150363167	150363203	(5677692)	+	(GTGAGT)n	Simple_repeat	1	39	(0)	4565801
13	15.4	5.6	0.0	chrX	150363370	150363405	(5677490)	+	(GCGGCGG)n	Simple_repeat	1	38	(0)	4565802
14	23.6	1.9	3.7	chrX	150363463	150363515	(5677380)	+	(GCC)n	Simple_repeat	1	54	(0)	4565803
5767	17.6	1.3	0.2	chrX	152234276	152235376	(3805519)	C	L1P4	LINE/L1	(798)	5348	4235	4568704
1814	11.9	1.2	0.0	chrX	153186278	153186530	(2854365)	C	AluSx1	SINE/Alu	(13)	299	44	4569944
190	26.4	17.5	2.3	chrX	153311017	153311272	(2729623)	+	L2c	LINE/L2	2910	3212	(175)	4570102
435	22.8	5.0	1.8	chrX	153382513	153383910	(2656985)	+	(CA)n	Simple_repeat	1	1468	(0)	4570195
184	29.0	4.6	0.0	chrX	155026506	155026567	(1014328)	+	L2a	LINE/L2	3355	3419	(7)	4572775
3680	6.0	0.8	0.0	chrX	155549733	155550216	(490679)	C	L1PA7	LINE/L1	(5)	6149	5662	4573475
6112	24.5	0.6	0.4	chrY	10925266	10926566	(46300849)	+	(TTCCA)n	Simple_repeat	4	1309	(0)	4588455
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638