2198	11.0	0.7	1.3	chr1	1016061	1016360	(247940062)	C	AluSx1	SINE/Alu	(14)	298	1	1282
262	20.6	10.7	1.1	chr1	2189990	2190082	(246766340)	+	MER5A	DNA/hAT-Charlie	82	184	(5)	2979
353	25.7	8.4	5.5	chr1	7075272	7075477	(241880945)	C	MER112	DNA/hAT-Charlie	(35)	226	15	9358
2328	11.0	0.0	0.0	chr1	7075663	7075962	(241880460)	C	AluSx	SINE/Alu	(12)	300	1	9359
23061	6.0	0.1	1.8	chr1	7602177	7605817	(241350605)	C	L1PA4	LINE/L1	(2525)	3794	189	10054
3177	18.9	7.3	4.3	chr1	9390412	9390955	(239565467)	+	MER4E1	LTR/ERV1	246	771	(10)	13478
10466	11.4	4.1	0.2	chr1	12222012	12223101	(236733321)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	429	19432
376	30.9	5.0	0.0	chr1	16028899	16029050	(232927372)	C	MIRb	SINE/MIR	(57)	211	52	26546
433	28.9	6.9	0.0	chr1	16050654	16050802	(232905620)	C	MIRb	SINE/MIR	(57)	211	52	26577
13	23.0	5.0	3.2	chr1	16960884	16960943	(231995479)	+	(CTGGAG)n	Simple_repeat	1	63	(0)	28363
13	22.6	5.0	3.2	chr1	16961028	16961087	(231995335)	+	(GGCCTC)n	Simple_repeat	1	63	(0)	28364
26	0.0	0.0	0.0	chr1	16961206	16961230	(231995192)	+	(TGTTTT)n	Simple_repeat	1	25	(0)	28365
258	26.1	3.1	1.9	chr1	18356703	18357531	(230598891)	+	(GATGGA)n	Simple_repeat	1	855	(0)	31466
34	22.7	2.3	0.0	chr1	18956192	18956278	(230000144)	+	(CCG)n	Simple_repeat	1	89	(0)	32773
11	22.8	6.9	3.9	chr1	18956346	18956417	(230000005)	+	(GGCCCCG)n	Simple_repeat	1	77	(0)	32774
11330	9.0	1.4	0.1	chr1	19995929	19997410	(228959012)	+	L1P2	LINE/L1	1	1502	(4682)	34914
319	27.9	0.0	3.4	chr1	21379259	21379347	(227577075)	+	MLT1K	LTR/ERVL-MaLR	52	137	(352)	37812
622	29.0	5.3	0.0	chr1	21379431	21379644	(227576778)	+	MLT1K	LTR/ERVL-MaLR	370	595	(0)	37812
3735	15.8	11.5	1.2	chr1	25232782	25233512	(223722910)	+	LTR8B	LTR/ERV1	2	817	(3)	46664
182	36.6	13.1	0.0	chr1	27013222	27013314	(221943108)	C	MIR3	SINE/MIR	(21)	187	81	50692
2596	4.8	0.3	0.0	chr1	27013372	27013681	(221942741)	+	AluY	SINE/Alu	1	311	(0)	50693
14	18.4	2.7	0.0	chr1	27392530	27392566	(221563856)	+	(GCCGC)n	Simple_repeat	1	38	(0)	51639
4615	11.2	0.3	0.3	chr1	29404322	29405002	(219551420)	C	L1PA5	LINE/L1	(5474)	681	1	56541
3526	16.9	6.0	0.3	chr1	29405005	29405643	(219550779)	+	MSTA-int	LTR/ERVL-MaLR	401	1078	(553)	56540
3179	12.6	2.5	6.6	chr1	30491123	30491666	(218464756)	C	MER1A	DNA/hAT-Charlie	(8)	521	1	58506
439	15.5	2.1	21.1	chr1	32691673	32691852	(216264570)	+	MER33	DNA/hAT-Charlie	244	324	(0)	63501
2254	6.9	2.4	0.7	chr1	32691952	32692239	(216264183)	+	AluYk3	SINE/Alu	1	293	(18)	63502
694	23.7	10.1	1.7	chr1	33496008	33496243	(215460179)	C	MIR	SINE/MIR	(3)	259	2	65215
9803	9.2	0.1	0.0	chr1	33835724	33837011	(215119411)	C	L1P1	LINE/L1	(4866)	1289	1	65731
24852	6.4	0.2	0.4	chr1	37375024	37381203	(211575219)	C	L1PA6	LINE/L1	(0)	6327	174	72597
37	32.3	0.7	1.4	chr1	37474624	37474766	(211481656)	+	GA-rich	Low_complexity	1	144	(0)	72810
24926	6.7	0.4	0.7	chr1	38629157	38635345	(210321077)	C	L1PA6	LINE/L1	(0)	6327	180	75053
11	14.2	10.3	0.0	chr1	38991486	38991524	(209964898)	+	G-rich	Low_complexity	1	43	(0)	75807
1007	11.3	3.2	1.3	chr1	39027582	39027732	(209928690)	C	AluJo	SINE/Alu	(15)	297	144	75889
26	0.0	0.0	0.0	chr1	39027740	39027764	(209928658)	+	(T)n	Simple_repeat	1	25	(0)	75890
642	29.3	14.6	3.5	chr1	40339850	40340418	(208616004)	+	L2b	LINE/L2	2122	2764	(655)	78625
24395	4.7	1.0	0.0	chr1	41176265	41182362	(207774060)	+	L1PA4	LINE/L1	1	6155	(0)	80290
22721	6.5	3.5	2.2	chr1	41205077	41205472	(207750950)	+	L1PA6	LINE/L1	8	414	(5732)	80340
394	3.6	1.8	0.0	chr1	41205473	41205527	(207750895)	+	MER9a2	LTR/ERVK	382	437	(76)	80341
22721	6.5	3.5	2.2	chr1	41205528	41207751	(207748671)	+	L1PA6	LINE/L1	415	2701	(3445)	80340
15	14.6	5.3	0.0	chr1	42035939	42035976	(206920446)	+	(GCCCCAG)n	Simple_repeat	1	40	(0)	81836
11395	7.8	0.4	0.6	chr1	42234038	42235549	(206720873)	C	L1PA4	LINE/L1	(4644)	1511	3	82156
12	18.0	2.0	7.7	chr1	42456513	42456563	(206499859)	+	(GGCGC)n	Simple_repeat	1	52	(0)	82545
7818	8.5	2.3	2.1	chr1	42501439	42502605	(206453817)	C	L1P2	LINE/L1	(5011)	1173	4	82630
38	2.8	0.0	0.0	chr1	44031167	44031203	(204925219)	+	(CA)n	Simple_repeat	1	37	(0)	85306
13	13.2	6.1	0.0	chr1	44031405	44031437	(204924985)	+	(GCCGC)n	Simple_repeat	1	35	(0)	85307
2103	10.2	2.1	0.0	chr1	44796587	44796869	(204159553)	C	AluSx1	SINE/Alu	(23)	289	1	86728
1728	13.5	1.4	6.6	chr1	44796879	44797028	(204159394)	C	AluJb	SINE/Alu	(25)	287	136	86729
1578	14.1	0.3	10.5	chr1	44797029	44797361	(204159061)	C	AluJo	SINE/Alu	(9)	303	5	86730
10290	14.7	1.4	1.4	chr1	45257534	45258932	(203697490)	+	MSTA-int	LTR/ERVL-MaLR	1	1412	(219)	87614
27148	4.5	0.2	0.1	chr1	45284566	45290711	(203665711)	+	L1PA4	LINE/L1	4	6155	(0)	87672
451	25.9	12.3	2.5	chr1	46198868	46198936	(202757486)	C	MIR	SINE/MIR	(41)	221	147	89530
2380	8.0	0.0	0.3	chr1	46198937	46199236	(202757186)	C	AluSz	SINE/Alu	(7)	305	7	89531
25252	6.5	0.1	0.2	chr1	46825139	46831312	(202125110)	C	L1PA5	LINE/L1	(1)	6153	1	90668
17484	7.1	0.5	0.5	chr1	46962587	46965401	(201991021)	C	L1P1	LINE/L1	(3331)	2815	1	90804
4753	26.0	4.4	2.0	chr1	46965404	46966726	(201989696)	C	L1PA12	LINE/L1	(5215)	2404	6	90805
24167	6.0	0.5	0.0	chr1	47006447	47012568	(201943854)	+	L1PA5	LINE/L1	2	6152	(2)	90838
180	43.1	0.7	0.0	chr1	47537481	47537617	(201418805)	C	MIRb	SINE/MIR	(7)	261	124	91818
8090	7.1	0.2	0.2	chr1	47602229	47605039	(201351383)	+	L1PA5	LINE/L1	4305	6138	(16)	91949
15654	7.8	1.2	0.5	chr1	48288371	48291156	(200665266)	+	L1P2	LINE/L1	8	2797	(3349)	93131
25420	5.9	0.2	1.3	chr1	49737847	49744064	(199212358)	+	L1PA4	LINE/L1	14	6152	(3)	95628
25589	6.5	0.1	0.2	chr1	49915109	49921256	(199035166)	+	L1PA5	LINE/L1	11	6154	(0)	95856
13	23.3	0.0	0.0	chr1	51236363	51236397	(197720025)	+	(GCA)n	Simple_repeat	1	35	(0)	98248
2245	11.2	0.3	0.0	chr1	51324975	51325270	(197631152)	+	AluSp	SINE/Alu	3	299	(14)	98442
429	31.3	4.3	2.7	chr1	51325271	51325388	(197631034)	+	L2	LINE/L2	2821	2939	(480)	98437
470	24.3	3.4	8.8	chr1	51325497	51325709	(197630713)	C	MIRb	SINE/MIR	(44)	224	11	98443
14	22.6	0.0	0.0	chr1	52142246	52142281	(196814141)	+	(AGC)n	Simple_repeat	1	36	(0)	100279
260	39.6	4.5	5.5	chr1	52711418	52711674	(196244748)	C	L2c	LINE/L2	(249)	3138	2883	101535
1760	10.3	0.7	17.2	chr1	52711675	52712034	(196244388)	+	AluSq2	SINE/Alu	1	300	(13)	101536
24378	6.0	0.6	0.1	chr1	53004663	53010782	(195945640)	+	L1PA5	LINE/L1	8	6146	(8)	102282
24556	7.0	0.2	0.2	chr1	54444364	54449412	(194507010)	C	L1PA5	LINE/L1	(1092)	5054	3	105092
311	27.8	2.2	0.0	chr1	54463249	54463338	(194493084)	C	MIR3	SINE/MIR	(61)	147	56	105136
203	28.3	2.6	8.9	chr1	54463373	54463496	(194492926)	+	MIR3	SINE/MIR	21	136	(72)	105137
2223	11.5	0.0	0.3	chr1	54556588	54556882	(194399540)	C	AluSx	SINE/Alu	(18)	294	1	105367
7754	11.1	2.8	3.2	chr1	54556883	54556907	(194399515)	C	L1MA8	LINE/L1	(1687)	4456	4438	105360
1416	14.5	0.0	18.9	chr1	54556908	54557111	(194399311)	C	AluJo	SINE/Alu	(14)	298	123	105368
2480	9.5	0.0	0.0	chr1	54557112	54557417	(194399005)	+	AluSg	SINE/Alu	1	306	(4)	105369
1954	12.3	1.6	5.5	chr1	54564083	54564269	(194392153)	+	AluJb	SINE/Alu	134	312	(0)	105382
260	26.3	3.8	0.0	chr1	55147491	55147566	(193808856)	C	L1MD2	LINE/L1	(264)	6095	6017	106539
13	16.5	0.0	5.3	chr1	55215174	55215211	(193741211)	+	(CGCGC)n	Simple_repeat	1	38	(0)	106639
13	20.1	0.0	2.8	chr1	55215315	55215350	(193741072)	+	(GGCGC)n	Simple_repeat	1	36	(0)	106640
17	8.1	0.0	0.0	chr1	55215359	55215384	(193741038)	+	(CCT)n	Simple_repeat	1	26	(0)	106641
4731	9.8	2.9	2.6	chr1	55787496	55788175	(193168247)	C	HERV17-int	LTR/ERV1	(7935)	691	2	107704
5164	13.0	3.2	3.8	chr1	55788184	55788968	(193167454)	C	LTR17	LTR/ERV1	(0)	780	1	107705
281	30.2	14.4	0.0	chr1	55868037	55868185	(193088237)	C	MIRb	SINE/MIR	(21)	247	74	107790
17	4.9	0.0	0.0	chr1	55868254	55868274	(193088148)	+	(T)n	Simple_repeat	1	21	(0)	107791
33	7.0	0.0	0.0	chr1	56579466	56579510	(192376912)	+	(CCTCCTGCT)n	Simple_repeat	1	45	(0)	109122
15	15.3	0.0	0.0	chr1	56579513	56579541	(192376881)	+	(TGC)n	Simple_repeat	1	29	(0)	109123
222	31.4	3.7	1.9	chr1	57066761	57066867	(191889555)	C	MIR	SINE/MIR	(70)	192	84	110060
25986	6.5	0.3	0.2	chr1	57563314	57568976	(191387446)	+	L1PA5	LINE/L1	11	5690	(464)	111076
18128	6.1	0.0	0.6	chr1	58488963	58490795	(190465627)	+	L1PA4	LINE/L1	7	1840	(4315)	112986
24829	5.3	0.2	0.1	chr1	59250824	59256962	(189699460)	+	L1PA4	LINE/L1	9	6155	(0)	114530
2313	6.0	0.0	0.0	chr1	59694020	59694335	(189262087)	+	AluYc	SINE/Alu	1	299	(0)	115292
660	21.8	0.8	1.5	chr1	59694691	59694823	(189261599)	C	FLAM_A	SINE/Alu	(10)	132	1	115293
444	32.4	0.6	3.2	chr1	59694826	59695010	(189261412)	+	MER103C	DNA/hAT-Charlie	118	297	(0)	115294
24045	6.5	0.4	0.1	chr1	60772541	60778675	(188177747)	C	L1PA5	LINE/L1	(2)	6152	7	117100
41	24.9	2.5	0.0	chr1	61082191	61082308	(187874114)	+	(GAGC)n	Simple_repeat	1	121	(0)	117647
16	18.9	0.0	0.0	chr1	61082351	61082380	(187874042)	+	(C)n	Simple_repeat	1	30	(0)	117648
22	19.3	6.8	4.5	chr1	61082380	61082482	(187873940)	+	(CGCGG)n	Simple_repeat	1	110	(0)	117649
23852	6.6	1.3	0.1	chr1	61943141	61949224	(187007198)	+	L1PA5	LINE/L1	5	6153	(1)	119164
1383	22.0	15.6	11.6	chr1	62031976	62032571	(186923851)	C	MLT1E3	LTR/ERVL-MaLR	(0)	624	1	119335
4565	12.7	4.1	5.5	chr1	62061954	62062391	(186894031)	C	L1PA16	LINE/L1	(381)	5785	5354	119403
457	15.9	2.8	0.0	chr1	62062393	62062490	(186893932)	C	AluJo	SINE/Alu	(0)	312	218	119406
1773	16.6	1.1	1.1	chr1	62062491	62062787	(186893635)	C	AluJr	SINE/Alu	(0)	312	10	119407
9576	12.4	1.2	0.5	chr1	62062794	62064281	(186892141)	C	L1PA16	LINE/L1	(780)	5366	3869	119403
1037	20.3	11.2	19.4	chr1	63343875	63344296	(185612126)	+	MLT1B	LTR/ERVL-MaLR	4	386	(4)	121888
404	26.2	6.3	3.2	chr1	63344412	63344568	(185611854)	+	MIR3	SINE/MIR	10	169	(61)	121889
22	20.2	7.4	1.1	chr1	63523647	63523727	(185432695)	+	(TCTCTG)n	Simple_repeat	1	87	(0)	122201
1985	16.3	0.0	0.3	chr1	64504034	64504328	(184452094)	C	AluJb	SINE/Alu	(17)	295	2	124009
262	29.4	8.9	1.0	chr1	65116399	65116501	(183839921)	C	L2a	LINE/L2	(6)	3420	3309	125134
2144	13.7	0.0	0.0	chr1	65116507	65116799	(183839623)	+	AluSg	SINE/Alu	2	294	(16)	125135
23	23.6	1.1	5.6	chr1	65254442	65254529	(183701893)	+	(GCG)n	Simple_repeat	1	89	(0)	125433
23831	7.7	0.7	0.8	chr1	65462003	65468172	(183488250)	C	L1PA6	LINE/L1	(11)	6316	178	125830
5391	14.2	0.5	0.4	chr1	65744684	65745482	(183210940)	+	THE1D-int	LTR/ERVL-MaLR	461	1260	(371)	126214
26024	5.3	0.3	0.1	chr1	66184844	66190986	(182765436)	C	L1PA4	LINE/L1	(5)	6150	1	126851
6438	11.7	0.7	2.4	chr1	66461821	66462786	(182493636)	+	THE1D-int	LTR/ERVL-MaLR	1	950	(681)	127276
24397	5.8	0.4	0.3	chr1	67176639	67182776	(181773646)	C	L1PA4	LINE/L1	(3)	6152	9	128361
7174	13.4	2.6	1.3	chr1	68619938	68621021	(180335401)	C	THE1D-int	LTR/ERVL-MaLR	(97)	1534	436	130906
1395	15.7	0.0	0.9	chr1	68621024	68621233	(180335189)	+	AluSx4	SINE/Alu	86	293	(17)	130907
24105	7.3	0.5	0.1	chr1	69389450	69395594	(179560828)	C	L1PA5	LINE/L1	(0)	6154	3	131956
1842	17.3	0.3	0.3	chr1	70398934	70399228	(178557194)	+	AluJr	SINE/Alu	1	295	(17)	133366
14	25.5	0.0	4.0	chr1	71047615	71047664	(177908758)	+	(GCG)n	Simple_repeat	1	50	(0)	134342
9905	10.7	1.6	0.1	chr1	73667251	73668649	(175287773)	C	L1P1	LINE/L1	(4734)	1421	3	137647
11573	9.7	0.3	2.4	chr1	74913279	74914893	(174041529)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	139311
16038	7.8	2.8	0.1	chr1	75039879	75042554	(173913868)	+	L1PA8	LINE/L1	2	2757	(3389)	139472
24263	7.3	0.4	0.4	chr1	75175682	75181832	(173774590)	C	L1PA6	LINE/L1	(11)	6143	5	139621
4175	11.3	0.1	3.7	chr1	75181844	75182364	(173774058)	C	L1PB1	LINE/L1	(840)	5306	4794	139619
9648	12.9	3.7	4.3	chr1	75280948	75282536	(173673886)	+	THE1C-int	LTR/ERVL-MaLR	2	1580	(0)	139747
10760	11.8	3.1	0.9	chr1	75484094	75485687	(173470735)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	2	139976
7775	10.5	2.8	0.2	chr1	75754645	75755828	(173200594)	+	L1P2	LINE/L1	4	1219	(4965)	140404
22915	6.3	0.9	0.5	chr1	75777592	75783742	(173172680)	+	L1PA4	LINE/L1	175	6326	(2)	140448
2138	18.2	12.3	10.9	chr1	75785301	75785895	(173170527)	+	LTR8	LTR/ERV1	76	691	(0)	140454
796	13.3	0.8	4.4	chr1	75785896	75785970	(173170452)	C	AluJo	SINE/Alu	(235)	77	2	140453
21617	7.8	1.0	0.1	chr1	75828832	75834934	(173121488)	+	L1PA5	LINE/L1	4	6153	(1)	140532
12681	7.7	0.7	1.2	chr1	76969051	76970750	(171985672)	+	L1PA6	LINE/L1	5	1696	(4488)	142181
23401	7.5	0.4	0.3	chr1	76981022	76987179	(171969243)	+	L1PA6	LINE/L1	178	6326	(1)	142199
14	14.6	0.0	3.1	chr1	77683302	77683333	(171273089)	+	(CGC)n	Simple_repeat	1	32	(0)	143293
18	24.2	0.0	3.5	chr1	77683479	77683535	(171272887)	+	(GGC)n	Simple_repeat	1	57	(0)	143294
21135	9.4	1.7	0.8	chr1	78607700	78613730	(170342692)	+	L1PA6	LINE/L1	10	6154	(0)	144814
24262	7.6	0.9	0.2	chr1	79414189	79420301	(169536121)	+	L1PA5	LINE/L1	4	6154	(0)	145872
37	15.9	0.0	0.0	chr1	84078068	84078133	(164878289)	+	(CCG)n	Simple_repeat	1	66	(0)	152037
18	7.5	0.0	0.0	chr1	84893245	84893272	(164063150)	+	(GCCCC)n	Simple_repeat	1	28	(0)	153270
25552	6.1	0.3	0.1	chr1	86162361	86168489	(162787933)	C	L1PA5	LINE/L1	(9)	6318	175	155229
229	20.8	0.0	0.0	chr1	86393875	86393922	(162562500)	C	MER94	DNA/hAT-Blackjack	(0)	134	87	155535
311	32.7	13.6	0.6	chr1	86394058	86394217	(162562205)	C	MIRb	SINE/MIR	(25)	243	60	155536
1588	6.2	1.5	0.0	chr1	86394232	86394425	(162561997)	+	AluSc	SINE/Alu	97	293	(16)	155537
17492	6.4	0.6	0.1	chr1	86813789	86817284	(162139138)	+	L1P1	LINE/L1	9	3522	(2624)	156145
631	6.2	0.0	0.3	chr1	86817288	86817380	(162139042)	+	L1P1	LINE/L1	3865	3955	(2191)	156145
2981	10.1	0.9	1.2	chr1	86817380	86817802	(162138620)	C	L1P1	LINE/L1	(5550)	605	184	156146
11713	8.0	2.1	0.3	chr1	86923864	86925413	(162031009)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	156348
10004	10.9	4.5	3.1	chr1	87012594	87014151	(161942271)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	156479
321	33.5	3.6	2.4	chr1	88195292	88195456	(160760966)	+	Charlie4z	DNA/hAT-Charlie	1	167	(0)	158145
332	25.4	11.5	2.4	chr1	88195730	88195888	(160760534)	+	MIR3	SINE/MIR	23	202	(6)	158146
1752	13.8	8.5	0.0	chr1	88972076	88972386	(159984036)	C	MLT2D	LTR/ERVL	(56)	358	19	159301
183	12.5	11.1	2.4	chr1	88972412	88972452	(159983970)	+	L2a	LINE/L2	3378	3422	(4)	159302
992	27.2	8.7	0.3	chr1	88972509	88972822	(159983600)	C	MLT1I	LTR/ERVL-MaLR	(2)	409	67	159303
16318	7.6	1.7	0.1	chr1	89033761	89034690	(159921732)	C	L1PA6	LINE/L1	(5218)	966	2	159403
16050	8.9	1.3	0.3	chr1	89227063	89230922	(159725500)	C	L1PA6	LINE/L1	(2261)	4058	174	159632
24937	5.5	0.1	0.0	chr1	90166846	90172987	(158783435)	+	L1PA5	LINE/L1	5	6150	(4)	160952
10010	10.2	3.4	0.3	chr1	90224807	90226275	(158730147)	+	THE1B-int	LTR/ERVL-MaLR	1	1516	(64)	161018
26057	5.0	0.3	0.2	chr1	91296807	91302949	(157653473)	+	L1PA4	LINE/L1	2	6154	(1)	162548
2188	9.7	0.0	0.0	chr1	91311371	91311639	(157644783)	+	AluSx1	SINE/Alu	28	296	(16)	162558
11750	9.1	0.2	1.1	chr1	91311640	91312768	(157643654)	+	THE1A-int	LTR/ERVL-MaLR	465	1580	(0)	162557
25979	5.0	0.7	0.0	chr1	91366638	91372747	(157583675)	+	L1PA4	LINE/L1	3	6155	(0)	162616
25320	6.6	0.8	0.2	chr1	92430765	92436888	(156519534)	C	L1PA5	LINE/L1	(0)	6154	9	164466
25672	6.6	0.3	0.1	chr1	92589130	92591962	(156364460)	+	L1PA4	LINE/L1	1	2833	(3313)	164743
25952	5.5	0.7	0.4	chr1	92629667	92635797	(156320625)	C	L1PA4	LINE/L1	(1)	6154	3	164810
183	31.6	17.8	3.9	chr1	92635830	92636007	(156320415)	C	L3	LINE/CR1	(281)	3818	3611	164809
730	27.1	10.8	0.8	chr1	92854202	92854435	(156101987)	C	MIR	SINE/MIR	(1)	261	2	165235
25479	4.4	0.2	0.1	chr1	92891524	92897666	(156058756)	+	L1PA4	LINE/L1	2	6152	(3)	165318
27	0.0	0.0	0.0	chr1	93346087	93346112	(155610310)	+	(GCAGCG)n	Simple_repeat	1	26	(0)	166155
13298	16.9	7.1	5.1	chr1	93374061	93377098	(155579324)	+	L1MA3	LINE/L1	17	2929	(4636)	166201
24817	5.2	0.2	0.0	chr1	93401958	93408098	(155548324)	C	L1PA4	LINE/L1	(0)	6155	7	166244
26116	5.6	0.4	0.2	chr1	94134120	94140257	(154816165)	+	L1PA4	LINE/L1	3	6152	(3)	167344
16717	7.6	1.6	2.9	chr1	96616038	96617994	(152338428)	C	L1PA6	LINE/L1	(4197)	2160	174	170905
17	18.9	2.9	7.0	chr1	96721667	96721735	(152234687)	+	(CGC)n	Simple_repeat	1	71	(0)	171072
23942	7.5	0.8	0.2	chr1	97357838	97363959	(151592463)	+	L1PA6	LINE/L1	183	6320	(7)	171928
7168	9.3	3.8	0.8	chr1	98552709	98553730	(150402692)	+	L1P2	LINE/L1	396	1449	(4735)	173606
13	7.4	3.1	6.1	chr1	98661688	98661719	(150294703)	+	(GGC)n	Simple_repeat	1	33	(0)	173753
10605	10.8	3.1	1.0	chr1	98808683	98810219	(150146203)	C	THE1C-int	LTR/ERVL-MaLR	(1)	1579	10	173958
24465	7.0	1.2	0.2	chr1	98875639	98881734	(150074688)	C	L1PA6	LINE/L1	(8)	6146	1	174043
201	30.0	4.3	6.2	chr1	100037817	100037912	(148918510)	+	MIRb	SINE/MIR	96	189	(79)	175849
25118	5.2	0.2	0.0	chr1	100662982	100669120	(148287302)	C	L1PA4	LINE/L1	(2)	6153	7	176881
11051	11.3	2.2	0.1	chr1	101039940	101041529	(147914893)	C	MSTA-int	LTR/ERVL-MaLR	(6)	1625	1	177391
3910	13.5	0.8	2.0	chr1	102550420	102551018	(146405404)	C	THE1-int	LTR/ERVL-MaLR	(5)	1575	984	179443
1676	18.9	0.0	0.3	chr1	102551017	102551298	(146405124)	C	THE1-int	LTR/ERVL-MaLR	(877)	754	474	179443
24946	7.2	0.1	0.3	chr1	102826496	102832654	(146123768)	+	L1PA5	LINE/L1	3	6149	(5)	179821
25441	6.5	0.1	0.6	chr1	104218011	104223212	(144733210)	C	L1PA4	LINE/L1	(963)	5356	176	181460
9958	12.2	3.2	4.4	chr1	107509866	107511448	(141444974)	+	THE1C-int	LTR/ERVL-MaLR	1	1563	(17)	185539
24361	6.7	0.8	0.1	chr1	107732241	107738366	(141218056)	+	L1PA6	LINE/L1	2	6154	(0)	185835
9445	12.1	3.6	3.3	chr1	108173552	108175120	(140781302)	+	THE1C-int	LTR/ERVL-MaLR	1	1574	(6)	186464
13	15.6	4.2	6.0	chr1	108542063	108542110	(140414312)	+	(TTTGC)n	Simple_repeat	1	50	(0)	186894
23524	6.3	0.1	0.1	chr1	108542344	108548024	(140408398)	+	L1PA6	LINE/L1	488	6151	(3)	186895
9543	12.1	4.6	0.5	chr1	108784578	108786087	(140170335)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	6	187319
10815	10.4	4.0	0.0	chr1	109433682	109435197	(139521225)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	188576
571	36.5	5.7	2.5	chr1	111162011	111162485	(137793937)	C	L2	LINE/L2	(404)	3015	2525	191188
22595	7.7	0.6	1.5	chr1	111295532	111301417	(137655005)	+	L1PA6	LINE/L1	8	5828	(326)	191353
23761	6.9	0.8	0.4	chr1	112211669	112217805	(136738617)	+	L1PA5	LINE/L1	4	6153	(1)	192735
18724	7.1	0.7	0.0	chr1	112288053	112292483	(136663939)	+	L1PA5	LINE/L1	41	4502	(1644)	192837
13	11.6	2.2	8.7	chr1	113390176	113390220	(135566202)	+	(CCCCT)n	Simple_repeat	1	46	(0)	194976
23536	6.9	0.9	0.2	chr1	113473263	113479382	(135477040)	C	L1PA6	LINE/L1	(2)	6152	5	195091
2836	22.0	4.1	2.5	chr1	113479399	113480843	(135475579)	C	L1M3c	LINE/L1	(4387)	2720	3	195092
26477	5.2	0.5	0.1	chr1	114303992	114310120	(134646302)	+	L1PA3	LINE/L1	1	6155	(0)	196377
2333	6.2	5.3	0.0	chr1	114562187	114562510	(134393912)	C	L1P1	LINE/L1	(5262)	893	552	196855
6771	4.2	1.4	0.1	chr1	114562508	114563893	(134392529)	+	L1PA5	LINE/L1	4747	6147	(7)	196856
9525	10.3	8.6	1.1	chr1	115011768	115013060	(133943362)	+	MSTA-int	LTR/ERVL-MaLR	217	1631	(0)	197578
24138	7.2	1.2	0.7	chr1	115383345	115389475	(133566947)	C	L1PA6	LINE/L1	(7)	6147	1	198110
22	0.0	0.0	0.0	chr1	115641538	115641561	(133314861)	+	(TG)n	Simple_repeat	1	24	(0)	198478
12	27.4	2.0	2.0	chr1	115641680	115641729	(133314693)	+	(GTGT)n	Simple_repeat	1	51	(0)	198479
14	23.5	4.3	4.1	chr1	115641866	115641935	(133314487)	+	(GGCTG)n	Simple_repeat	1	73	(0)	198480
15	26.0	3.3	1.6	chr1	115641931	115641991	(133314431)	+	(GGCAGC)n	Simple_repeat	1	63	(0)	198481
13	4.8	4.5	0.0	chr1	115641973	115641994	(133314428)	+	(GCG)n	Simple_repeat	1	23	(0)	198482
13	22.3	4.3	5.5	chr1	115642016	115642085	(133314337)	+	(CGCGGAC)n	Simple_repeat	1	73	(0)	198483
26130	6.0	0.6	0.1	chr1	116974739	116980865	(131975557)	+	L1PA5	LINE/L1	1	6152	(2)	200574
10341	11.9	3.9	0.7	chr1	117258095	117259623	(131696799)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	201010
45	2.3	0.0	0.0	chr1	117367314	117367358	(131589064)	+	(GAG)n	Simple_repeat	1	45	(0)	201206
14	4.7	0.0	4.2	chr1	117367469	117367492	(131588930)	+	(GCG)n	Simple_repeat	1	24	(0)	201207
22932	6.9	0.9	0.1	chr1	117763987	117770099	(131186323)	C	L1PA6	LINE/L1	(11)	6143	1	201776
283	25.5	13.6	2.5	chr1	118075414	118075570	(130880852)	+	MER103C	DNA/hAT-Charlie	58	234	(63)	202260
9719	14.4	3.0	0.2	chr1	118238327	118239910	(130716512)	+	THE1C-int	LTR/ERVL-MaLR	3	1631	(0)	202485
11533	8.1	1.1	0.1	chr1	119214080	119215550	(129740872)	C	L1P2	LINE/L1	(4697)	1487	1	203764
16558	8.9	1.3	1.4	chr1	120480580	120480729	(128475693)	+	L1P2	LINE/L1	2110	2237	(3909)	205612
25832	7.0	0.1	0.1	chr1	120480724	120486850	(128469572)	+	L1PA6	LINE/L1	11	6138	(16)	205614
25174	6.7	0.7	0.2	chr1	121598207	121604319	(127352103)	C	L1PA4	LINE/L1	(6)	6149	2	207251
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
25658	6.6	0.4	0.0	chr1	145553327	145559446	(103396976)	C	L1PA5	LINE/L1	(11)	6143	2	211159
1755	18.4	1.0	1.4	chr1	147300141	147300433	(101655989)	+	AluJo	SINE/Alu	1	292	(20)	213926
10809	13.4	8.7	3.3	chr1	147300434	147303090	(101653332)	+	L1MA8	LINE/L1	3460	6279	(12)	213923
23591	6.9	1.0	0.3	chr1	147342998	147349114	(101607308)	+	L1PA5	LINE/L1	11	6149	(5)	213964
15135	6.1	0.9	1.7	chr1	147710434	147711852	(101244570)	C	L1PA6	LINE/L1	(4413)	1771	342	214506
1267	25.2	2.9	8.3	chr1	150061190	150061551	(98894871)	C	L1ME3C	LINE/L1	(134)	5989	5646	218253
408	32.9	7.3	0.0	chr1	150061552	150061691	(98894731)	C	Charlie17a	DNA/hAT-Charlie	(0)	217	67	218255
3084	11.6	0.5	0.0	chr1	150061704	150062135	(98894287)	+	LTR47B4	LTR/ERVL	1	434	(0)	218256
554	7.3	1.2	0.0	chr1	151362385	151362466	(97593956)	+	MSTA	LTR/ERVL-MaLR	1	83	(345)	221056
6325	13.2	1.9	0.2	chr1	151362472	151363452	(97592970)	+	MSTA-int	LTR/ERVL-MaLR	634	1631	(0)	221057
10187	15.7	0.7	0.7	chr1	151736710	151738338	(97218084)	+	MSTA-int	LTR/ERVL-MaLR	2	1631	(0)	221826
2884	13.7	5.5	1.5	chr1	151907955	151908832	(97047590)	+	MER61-int	LTR/ERV1	247	1272	(3945)	222090
15	14.4	0.0	0.0	chr1	152036854	152036877	(96919545)	+	(T)n	Simple_repeat	1	24	(0)	222295
13	0.0	5.0	0.0	chr1	152036883	152036902	(96919520)	+	(AAG)n	Simple_repeat	1	21	(0)	222296
9085	18.3	1.8	1.3	chr1	152147542	152148949	(96807473)	C	MSTB-int	LTR/ERVL-MaLR	(227)	1424	2	222447
26602	5.8	0.3	0.1	chr1	152547783	152553918	(96402504)	C	L1PA4	LINE/L1	(0)	6155	8	222939
12010	13.8	1.3	2.2	chr1	152553917	152554851	(96401571)	+	L1PA15-16	LINE/L1	2573	3496	(3818)	222936
24256	6.6	0.8	0.6	chr1	153406997	153413138	(95543284)	+	L1PA5	LINE/L1	4	6146	(8)	224029
34	0.0	0.0	0.0	chr1	153772021	153772051	(95184371)	+	(GGT)n	Simple_repeat	1	31	(0)	224740
285	32.4	3.9	2.2	chr1	154878920	154879102	(94077320)	C	MIR3	SINE/MIR	(2)	206	24	226948
30	3.1	0.0	0.0	chr1	155000642	155000674	(93955748)	+	(CCCCCCG)n	Simple_repeat	1	33	(0)	227185
13	21.4	0.0	4.8	chr1	155044825	155044866	(93911556)	+	GA-rich	Low_complexity	1	42	(0)	227251
426	27.5	2.7	1.7	chr1	155045082	155045262	(93911160)	C	MamRep564	Unknown	(89)	268	86	227252
785	26.0	5.6	0.8	chr1	155226394	155226649	(93729773)	C	L2	LINE/L2	(414)	3005	2737	227578
222	33.1	5.9	4.5	chr1	155226694	155226826	(93729596)	+	L2c	LINE/L2	3052	3186	(189)	227579
554	14.9	0.0	0.0	chr1	155226863	155226965	(93729457)	C	FLAM_C	SINE/Alu	(90)	212	38	227580
12	12.6	0.0	3.6	chr1	155250854	155250881	(93705541)	+	(GCCTG)n	Simple_repeat	1	28	(0)	227620
819	23.3	0.6	0.0	chr1	156193275	156193437	(92762985)	+	FRAM	SINE/Alu	3	166	(10)	229675
1958	10.3	5.9	1.0	chr1	156193472	156193761	(92762661)	C	AluSx	SINE/Alu	(7)	305	1	229676
221	31.6	7.3	2.6	chr1	156291138	156291254	(92665168)	+	MIR	SINE/MIR	136	258	(4)	229861
19	23.8	0.0	0.0	chr1	156728593	156728641	(92227781)	+	(GCG)n	Simple_repeat	1	49	(0)	230643
299	29.9	12.0	0.7	chr1	157490482	157490636	(91465786)	+	MIRb	SINE/MIR	22	196	(72)	231779
1698	15.1	0.0	7.5	chr1	157490831	157491135	(91465287)	+	AluJb	SINE/Alu	11	292	(20)	231780
22788	5.8	0.3	0.0	chr1	159538220	159544248	(89412174)	+	L1PA4	LINE/L1	7	6152	(3)	234422
13	9.7	0.0	0.0	chr1	161306389	161306410	(87650012)	+	(AGC)n	Simple_repeat	1	22	(0)	237266
12	20.2	2.9	0.0	chr1	161524527	161524560	(87431862)	+	(AGCTG)n	Simple_repeat	1	35	(0)	237664
16912	6.6	2.6	0.0	chr1	162448247	162450716	(86505706)	+	L1PA4	LINE/L1	11	2548	(3598)	239143
10693	3.2	1.2	5.3	chr1	162465417	162466823	(86489599)	+	SVA_D	Retroposon/SVA	38	1386	(0)	239173
29	3.2	0.0	0.0	chr1	162466828	162466859	(86489563)	+	(AAAC)n	Simple_repeat	1	32	(0)	239174
1112	26.5	4.1	6.3	chr1	162466873	162467420	(86489002)	+	L2a	LINE/L2	2857	3383	(43)	239170
23886	6.5	0.8	0.6	chr1	162746010	162752153	(86204269)	+	L1PA6	LINE/L1	10	6151	(3)	239720
37	7.2	3.4	0.0	chr1	164559076	164559134	(84397288)	+	(CCT)n	Simple_repeat	1	61	(0)	242316
17	18.2	0.0	0.0	chr1	164559329	164559359	(84397063)	+	G-rich	Low_complexity	1	31	(0)	242317
19	21.7	1.6	3.2	chr1	164559584	164559651	(84396771)	+	(CCCCTC)n	Simple_repeat	1	66	(0)	242318
14660	8.1	1.2	2.0	chr1	165019332	165022545	(83933877)	C	L1PA5	LINE/L1	(2959)	3187	16	242985
11573	9.1	2.3	0.0	chr1	165182499	165184039	(83772383)	+	THE1B-int	LTR/ERVL-MaLR	3	1580	(0)	243229
7934	9.3	5.2	0.2	chr1	165690452	165691639	(83264783)	+	L1PA6	LINE/L1	8	1255	(4929)	244097
26359	4.9	0.7	0.0	chr1	165778070	165784153	(83172269)	C	L1PA4	LINE/L1	(26)	6129	2	244286
24345	6.0	0.3	0.3	chr1	166310879	166317027	(82639395)	C	L1PA4	LINE/L1	(1)	6154	4	245094
24224	6.3	0.3	0.1	chr1	166411300	166417438	(82538984)	C	L1PA4	LINE/L1	(1)	6154	2	245247
20	31.8	0.9	5.1	chr1	167722117	167722232	(81234190)	+	(GCG)n	Simple_repeat	1	117	(0)	247194
1148	13.7	0.0	0.0	chr1	168225441	168225608	(80730814)	C	AluJo	SINE/Alu	(11)	301	134	248046
11914	8.0	1.4	0.1	chr1	169871519	169873077	(79083345)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	250572
9450	12.0	3.7	4.1	chr1	170206774	170208360	(78748062)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	251000
25875	5.6	0.1	0.2	chr1	170463886	170470037	(78486385)	+	L1PA4	LINE/L1	9	6155	(0)	251345
10583	11.1	3.2	1.0	chr1	170742371	170743914	(78212508)	C	THE1B-int	LTR/ERVL-MaLR	(1)	1579	1	251711
22580	7.1	0.5	0.5	chr1	170810749	170816890	(78139532)	+	L1PA6	LINE/L1	1	6121	(33)	251805
23116	8.2	1.6	0.7	chr1	171550469	171556557	(77399865)	C	L1PA6	LINE/L1	(0)	6154	5	252937
2699	17.3	0.0	7.2	chr1	172559421	172559944	(76396478)	C	MER66B	LTR/ERV1	(0)	486	1	254397
24672	6.7	0.9	0.4	chr1	172591275	172597414	(76359008)	C	L1PA5	LINE/L1	(2)	6152	4	254427
9243	12.7	8.4	2.0	chr1	172813699	172815220	(76141202)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	3	254729
11996	8.9	0.4	0.2	chr1	173470157	173471734	(75484688)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	255650
43	23.6	1.3	5.2	chr1	173477142	173477294	(75479128)	+	(CCGGC)n	Simple_repeat	1	155	(0)	255658
25750	5.1	0.8	0.1	chr1	173725765	173731872	(75224550)	+	L1PA4	LINE/L1	5	6152	(3)	256012
22892	6.8	0.5	0.4	chr1	173811695	173816857	(75139565)	+	L1PA6	LINE/L1	4	5161	(985)	256142
505	30.9	15.9	3.4	chr1	174667343	174667550	(74288872)	+	MIRb	SINE/MIR	2	240	(28)	257498
349	28.9	10.7	16.9	chr1	174667549	174667951	(74288471)	+	L2b	LINE/L2	3008	3382	(5)	257499
504	18.7	0.0	0.9	chr1	174668035	174668142	(74288280)	C	L1ME2z	LINE/L1	(3)	6441	6335	257500
16593	7.9	0.6	0.1	chr1	176295053	176297228	(72659194)	C	L1P2	LINE/L1	(3992)	2192	4	260019
25216	6.7	0.1	0.1	chr1	177986028	177992195	(70964227)	+	L1PA6	LINE/L1	2	6154	(0)	262391
14	14.2	3.2	0.0	chr1	178093445	178093475	(70862947)	+	A-rich	Low_complexity	1	32	(0)	262568
41	14.1	0.0	1.4	chr1	178093761	178093834	(70862588)	+	(GCCGCC)n	Simple_repeat	1	74	(0)	262569
23159	6.8	0.8	1.4	chr1	179460044	179466249	(69490173)	C	L1PA5	LINE/L1	(1)	6153	4	264871
10093	11.3	7.3	0.5	chr1	179474286	179475804	(69480618)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	264880
11019	10.6	1.5	1.5	chr1	179477675	179478817	(69477605)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	426	264882
21	16.0	1.6	6.2	chr1	180229723	180229785	(68726637)	+	(GCCCC)n	Simple_repeat	1	64	(0)	266082
19	11.7	2.7	0.0	chr1	180229938	180229975	(68726447)	+	(GGCGGA)n	Simple_repeat	1	39	(0)	266083
22	15.5	0.0	0.0	chr1	180229990	180230032	(68726390)	+	(GCCCC)n	Simple_repeat	1	43	(0)	266084
17	14.8	3.8	1.2	chr1	180230210	180230254	(68726168)	+	G-rich	Low_complexity	1	46	(0)	266085
18	19.2	2.7	6.6	chr1	181105313	181105386	(67851036)	+	(GCGCGG)n	Simple_repeat	1	76	(0)	267473
21	16.6	2.9	3.8	chr1	181105455	181105526	(67850896)	+	G-rich	Low_complexity	1	71	(0)	267474
16614	8.2	1.2	0.6	chr1	181882228	181886068	(67070354)	+	L1P2	LINE/L1	174	4019	(2300)	268572
264	28.8	12.6	0.0	chr1	182942537	182942647	(66013775)	C	Charlie18a	DNA/hAT-Charlie	(212)	130	4	270303
26469	5.7	0.5	0.3	chr1	184231781	184235388	(64721034)	C	L1PA4	LINE/L1	(2525)	3621	3	272315
243	32.0	10.8	0.9	chr1	184235428	184235543	(64720879)	C	L2c	LINE/L2	(16)	3371	3231	272317
25570	6.5	0.1	0.1	chr1	185778347	185784501	(63171921)	C	L1PA5	LINE/L1	(0)	6154	1	274770
10095	13.0	0.9	1.1	chr1	187177964	187179480	(61776942)	C	MSTA-int	LTR/ERVL-MaLR	(117)	1514	1	276646
23492	7.8	2.4	0.1	chr1	189410639	189416659	(59539763)	C	L1PA6	LINE/L1	(3)	6324	175	279522
19287	8.0	1.3	0.5	chr1	190252800	190258347	(58698075)	C	L1PA6	LINE/L1	(18)	6136	279	280659
329	8.7	0.0	0.0	chr1	190258328	190258373	(58698049)	+	L1PA6	LINE/L1	237	282	(5902)	280659
8860	13.8	7.4	4.2	chr1	190366502	190368074	(58588348)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	5	280793
9904	13.9	2.1	2.5	chr1	191216916	191218547	(57737875)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	5	281866
23838	7.7	0.7	0.2	chr1	191373466	191378940	(57577482)	C	L1PA6	LINE/L1	(669)	5485	6	282060
9725	12.6	5.3	0.3	chr1	191973339	191974382	(56982040)	C	THE1C-int	LTR/ERVL-MaLR	(5)	1575	497	282810
23846	7.8	0.9	0.4	chr1	192662966	192669094	(56287328)	C	L1PA6	LINE/L1	(3)	6151	5	283688
9848	11.2	4.7	3.0	chr1	193432259	193433811	(55522611)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	284862
18	14.5	0.0	2.5	chr1	196608422	196608461	(52347961)	+	G-rich	Low_complexity	1	40	(0)	288876
23316	7.6	0.8	0.3	chr1	196935963	196942099	(52014323)	C	L1PA6	LINE/L1	(1)	6326	175	289266
23788	11.2	1.7	1.4	chr1	196986364	196992657	(51963765)	C	L1PA6	LINE/L1	(1)	6338	13	289332
11829	8.6	0.7	0.1	chr1	197871354	197872924	(51083498)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	290482
5561	9.6	2.6	0.4	chr1	199532935	199533695	(49422727)	+	THE1B-int	LTR/ERVL-MaLR	2	779	(801)	292637
366	10.8	5.8	1.5	chr1	199533692	199533757	(49422665)	+	THE1B	LTR/ERVL-MaLR	307	375	(0)	292637
25207	6.4	0.8	0.1	chr1	199647363	199653472	(49302950)	+	L1PA5	LINE/L1	8	6153	(1)	292801
24835	5.5	0.3	0.1	chr1	199880951	199887084	(49069338)	C	L1PA4	LINE/L1	(0)	6155	11	293157
1293	17.3	2.5	0.5	chr1	200487655	200487851	(48468571)	+	AluJb	SINE/Alu	87	287	(25)	294354
16	5.2	0.0	0.0	chr1	200487852	200487871	(48468551)	+	(GA)n	Simple_repeat	1	20	(0)	294355
28	0.0	0.0	0.0	chr1	200487873	200487899	(48468523)	+	(G)n	Simple_repeat	1	27	(0)	294356
39	2.7	0.0	0.0	chr1	200487903	200487940	(48468482)	+	(GA)n	Simple_repeat	1	38	(0)	294357
479	27.2	12.9	5.7	chr1	200487956	200488023	(48468399)	C	L2a	LINE/L2	(142)	3284	3217	294352
13	18.3	2.6	2.5	chr1	201916656	201916694	(47039728)	+	G-rich	Low_complexity	1	40	(0)	296832
11306	7.6	0.3	0.1	chr1	203256485	203257899	(45698523)	+	L1P2	LINE/L1	2	1420	(4764)	299304
840	31.3	6.3	5.3	chr1	203382069	203382554	(45573868)	C	LTR78	LTR/ERV1	(243)	1061	571	299506
25857	7.0	1.8	0.1	chr1	203411506	203414465	(45541957)	+	L1PA5	LINE/L1	4	3004	(3142)	299554
15	18.5	1.8	7.0	chr1	203650633	203650688	(45305734)	+	G-rich	Low_complexity	1	57	(0)	300037
1031	28.8	4.2	0.0	chr1	203974123	203974466	(44981956)	+	L1MD	LINE/L1	2315	2673	(3473)	300700
2454	18.4	13.8	1.0	chr1	203974471	203975070	(44981352)	+	MER77B	LTR/ERVL	1	689	(11)	300701
2263	8.8	3.5	1.6	chr1	205155388	205155692	(43800730)	+	AluSz	SINE/Alu	2	312	(0)	302897
10571	10.6	3.2	2.7	chr1	205155693	205156793	(43799629)	+	THE1C-int	LTR/ERVL-MaLR	496	1579	(1)	302894
675	27.8	6.9	0.9	chr1	209876301	209876540	(39079882)	+	MIRb	SINE/MIR	3	259	(9)	310318
16777	11.8	0.3	2.0	chr1	211075613	211078769	(37877653)	+	L1PA6	LINE/L1	179	3313	(3014)	312070
26076	6.1	0.6	0.1	chr1	211453402	211459510	(37496912)	+	L1PA5	LINE/L1	11	6152	(2)	312724
26727	5.1	0.4	0.0	chr1	212390466	212396588	(36559834)	+	L1PA5	LINE/L1	11	6146	(8)	314429
12	24.1	0.0	0.0	chr1	212608883	212608916	(36347506)	+	(CCCGC)n	Simple_repeat	1	34	(0)	314847
26579	4.8	0.3	0.8	chr1	212658026	212664183	(36292239)	+	L1PA4	LINE/L1	7	6149	(6)	314919
3359	21.8	8.5	1.1	chr1	212899554	212901090	(36055332)	+	L1M3c	LINE/L1	1356	3041	(4525)	315408
25853	5.4	0.5	0.0	chr1	213213892	213220019	(35736403)	+	L1PA4	LINE/L1	2	6154	(1)	315886
17286	8.2	2.3	0.1	chr1	213357936	213361681	(35594741)	C	L1P1	LINE/L1	(2296)	3850	11	316112
294	33.2	5.0	6.4	chr1	213944663	213944945	(35011477)	+	MLT1J	LTR/ERVL-MaLR	234	512	(0)	316982
180	31.8	8.3	4.3	chr1	213945095	213945232	(35011190)	C	L2c	LINE/L2	(195)	3192	3049	316983
10448	11.1	4.0	0.6	chr1	215323282	215324807	(33631615)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	318966
16369	7.9	0.9	0.3	chr1	215362982	215366038	(33590384)	C	L1P2	LINE/L1	(3053)	3093	35	319015
24912	7.1	0.6	0.7	chr1	215532202	215538371	(33418051)	+	L1PA5	LINE/L1	8	6154	(0)	319204
24380	6.6	0.7	0.6	chr1	221257454	221263615	(27692807)	C	L1PA5	LINE/L1	(2)	6152	6	327399
736	28.6	7.8	4.2	chr1	222590352	222590708	(26365714)	+	L3	LINE/CR1	3606	3976	(123)	329390
26269	6.2	0.2	0.4	chr1	223278089	223284243	(25672179)	+	L1PA5	LINE/L1	11	6154	(0)	330476
19	3.7	0.0	3.3	chr1	223845786	223845815	(25110607)	+	(GGC)n	Simple_repeat	1	30	(0)	331313
17	19.6	6.7	3.8	chr1	223845956	223846030	(25110392)	+	(CCGCG)n	Simple_repeat	1	80	(0)	331314
1987	14.1	1.1	1.1	chr1	224011691	224016553	(24939869)	+	(AATGG)n	Simple_repeat	1	4914	(0)	331634
24567	5.3	0.9	0.1	chr1	224940524	224946618	(24009804)	C	L1PA4	LINE/L1	(3)	6152	4	333390
25551	5.7	0.6	0.0	chr1	225055536	225061656	(23894766)	C	L1PA4	LINE/L1	(0)	6155	6	333528
25453	5.9	0.9	0.1	chr1	225168189	225174275	(23782147)	+	L1PA4	LINE/L1	11	6152	(3)	333642
24542	7.3	0.9	0.1	chr1	225211918	225218017	(23738405)	C	L1PA5	LINE/L1	(11)	6143	4	333684
21976	9.3	1.1	0.6	chr1	225218028	225221659	(23734763)	+	L1P3	LINE/L1	2189	5816	(671)	333682
960	17.5	1.3	0.0	chr1	225637780	225637933	(23318489)	+	AluJr	SINE/Alu	140	295	(17)	334277
462	29.3	7.6	3.1	chr1	226187088	226187249	(22769173)	C	MIRc	SINE/MIR	(11)	257	88	335386
189	29.0	3.7	0.0	chr1	226703765	226703851	(22252571)	+	MIRc	SINE/MIR	56	152	(116)	336313
10921	13.8	1.2	0.1	chr1	227470189	227471795	(21484627)	+	MSTA-int	LTR/ERVL-MaLR	2	1625	(6)	337573
10341	12.1	3.8	0.2	chr1	227486914	227488042	(21468380)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	420	337585
11799	8.7	0.9	0.2	chr1	227813273	227814789	(21141633)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	53	337922
20	16.4	0.0	0.0	chr1	228103264	228103304	(20853118)	+	(GCAACCC)n	Simple_repeat	1	41	(0)	338293
25269	4.8	0.2	0.1	chr1	228520691	228526835	(20429587)	C	L1PA4	LINE/L1	(2)	6153	1	338859
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
11	16.4	5.9	0.0	chr1	230978233	230978266	(17978156)	+	(CTGCCAC)n	Simple_repeat	1	36	(0)	342717
14	17.5	0.0	6.8	chr1	230978359	230978402	(17978020)	+	(GGC)n	Simple_repeat	1	44	(0)	342718
18	18.6	3.3	4.8	chr1	230978506	230978565	(17977857)	+	(GCC)n	Simple_repeat	1	62	(0)	342719
13	21.0	0.0	4.8	chr1	230978606	230978647	(17977775)	+	(GCC)n	Simple_repeat	1	42	(0)	342719
15	17.6	0.0	0.0	chr1	230978633	230978664	(17977758)	+	(CTG)n	Simple_repeat	1	32	(0)	342720
29	21.2	3.6	1.2	chr1	230978735	230978817	(17977605)	+	(CAG)n	Simple_repeat	1	86	(0)	342721
12	13.9	0.0	0.0	chr1	231422196	231422219	(17534203)	+	(GCC)n	Simple_repeat	1	24	(0)	343472
18	20.7	1.6	4.8	chr1	231422324	231422384	(17534038)	+	G-rich	Low_complexity	1	62	(0)	343473
12	17.2	4.9	2.3	chr1	231422410	231422450	(17533972)	+	(CCTCGG)n	Simple_repeat	1	43	(0)	343474
619	24.4	7.7	0.6	chr1	231422715	231422871	(17533551)	C	MIRb	SINE/MIR	(96)	172	4	343475
24	6.8	0.0	0.0	chr1	231626638	231626668	(17329754)	+	(GT)n	Simple_repeat	1	31	(0)	343832
15	0.0	0.0	0.0	chr1	231626668	231626684	(17329738)	+	(GC)n	Simple_repeat	1	17	(0)	343833
25099	7.0	0.3	0.9	chr1	231646102	231652225	(17304197)	C	L1HS	LINE/L1	(99)	6229	174	343868
180	33.9	7.9	7.1	chr1	232383448	232383685	(16572737)	C	L2	LINE/L2	(674)	2745	2506	344906
1318	24.5	4.6	4.1	chr1	232383744	232384109	(16572313)	C	MLT1A	LTR/ERVL-MaLR	(0)	374	7	344907
11349	10.1	1.1	0.8	chr1	232611288	232612862	(16343560)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	345159
11637	10.5	1.7	0.1	chr1	232993036	232994635	(15961787)	+	THE1D-int	LTR/ERVL-MaLR	1	1627	(4)	345754
2441	9.7	0.0	0.0	chr1	233081067	233081374	(15875048)	+	AluSg7	SINE/Alu	1	308	(1)	345857
22777	7.2	0.9	0.3	chr1	233764166	233770296	(15186126)	C	L1PA6	LINE/L1	(1)	6153	1	346877
1552	15.1	0.0	0.0	chr1	233856166	233856404	(15100018)	+	MER8	DNA/TcMar-Tigger	1	239	(0)	346993
2348	13.3	7.0	2.5	chr1	233951159	233951549	(15004873)	+	Tigger3c	DNA/TcMar-Tigger	2	411	(191)	347150
361	17.4	8.0	1.4	chr1	233951550	233951619	(15004803)	+	MER1A	DNA/hAT-Charlie	1	75	(454)	347151
1037	22.1	4.4	7.6	chr1	233951620	233951740	(15004682)	C	L1M7	LINE/L1	(4872)	1346	1240	347152
23879	6.3	0.6	0.3	chr1	234049639	234055784	(14900638)	C	L1PA5	LINE/L1	(1)	6153	4	347291
13	18.8	0.0	0.0	chr1	234478558	234478588	(14477834)	+	(CCCGCC)n	Simple_repeat	1	31	(0)	347927
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
427	29.8	13.4	3.2	chr1	237864245	237864525	(11091897)	C	LTR88a	LTR/Gypsy?	(17)	799	486	353891
342	29.1	13.8	3.2	chr1	237864922	237865198	(11091224)	+	LTR79	LTR/ERVL	33	343	(184)	353892
11096	11.5	1.9	0.3	chr1	238074772	238076373	(10880049)	C	THE1D-int	LTR/ERVL-MaLR	(1)	1630	3	354171
12061	8.9	0.4	0.2	chr1	239979013	239980586	(8975836)	+	THE1B-int	LTR/ERVL-MaLR	4	1580	(0)	356941
18	29.4	1.5	0.0	chr1	241640173	241640238	(7316184)	+	(CCGCCG)n	Simple_repeat	1	67	(0)	359586
1757	10.7	5.4	4.5	chr1	242114293	242114506	(6841916)	C	L1MA5A	LINE/L1	(7)	6290	6083	360493
3082	13.4	5.5	3.7	chr1	242114507	242114904	(6841518)	+	MER1A	DNA/hAT-Charlie	1	413	(116)	360494
24394	5.4	0.4	0.3	chr1	243807048	243813190	(5143232)	+	L1PA5	LINE/L1	3	6154	(0)	363110
22	22.9	4.1	1.3	chr1	243850046	243850118	(5106304)	+	(CGG)n	Simple_repeat	1	76	(0)	363167
13	32.1	0.0	0.0	chr1	243850081	243850130	(5106292)	+	G-rich	Low_complexity	1	50	(0)	363168
15	15.0	2.6	2.5	chr1	243850144	243850183	(5106239)	+	(CCCCT)n	Simple_repeat	1	40	(0)	363169
19	17.2	3.1	4.5	chr1	243850281	243850295	(5106127)	+	GA-rich	Low_complexity	1	15	(0)	363170
28	0.0	0.0	0.0	chr1	243850296	243850321	(5106101)	+	(GGC)n	Simple_repeat	1	26	(0)	363171
19	17.2	3.1	4.5	chr1	243850322	243850370	(5106052)	+	GA-rich	Low_complexity	16	63	(0)	363172
14	24.6	1.4	6.9	chr1	243850536	243850606	(5105816)	+	(CCG)n	Simple_repeat	1	72	(0)	363173
13	22.1	2.3	2.2	chr1	243850689	243850732	(5105690)	+	(CCCTG)n	Simple_repeat	1	45	(0)	363174
12	17.6	2.4	4.7	chr1	244451566	244451607	(4504815)	+	(CCCGGCG)n	Simple_repeat	1	43	(0)	364208
19	24.9	1.4	4.1	chr1	244451927	244451998	(4504424)	+	(CCCGC)n	Simple_repeat	1	73	(0)	364209
1611	17.4	0.0	1.4	chr1	244461823	244462103	(4494319)	C	AluJr	SINE/Alu	(21)	291	15	364218
24	23.7	4.7	1.1	chr1	244864370	244864458	(4091964)	+	(GGCTGC)n	Simple_repeat	1	92	(0)	364914
13	18.0	7.7	1.8	chr1	244969866	244969917	(3986505)	+	G-rich	Low_complexity	1	56	(0)	365185
9264	10.7	0.4	6.9	chr10	96022	97446	(133699976)	C	THE1D-int	LTR/ERVL-MaLR	(299)	1332	1	371131
5016	5.3	0.0	0.0	chr10	149873	150547	(133646875)	C	L1P1	LINE/L1	(2255)	3891	3217	371210
12768	7.7	1.0	0.0	chr10	150549	152994	(133644428)	+	L1P1	LINE/L1	622	3094	(3225)	371211
8434	15.6	2.2	0.4	chr10	979970	981408	(132816014)	C	MST-int	LTR/ERVL-MaLR	(186)	1465	1	372120
15	21.2	0.0	4.3	chr10	1048784	1048830	(132748592)	+	(GCCCC)n	Simple_repeat	1	47	(0)	372218
12	19.9	9.6	0.0	chr10	1048949	1049000	(132748422)	+	(CCAGCG)n	Simple_repeat	1	57	(0)	372219
3109	18.3	13.6	7.1	chr10	3361206	3361983	(130435439)	+	THE1B-int	LTR/ERVL-MaLR	3	839	(812)	374989
1026	11.8	0.0	1.4	chr10	3361980	3362125	(130435297)	+	THE1B	LTR/ERVL-MaLR	221	364	(0)	374990
2299	11.4	0.0	1.3	chr10	5857792	5857927	(127939495)	C	AluSz	SINE/Alu	(176)	136	1	378455
258	25.6	10.9	6.3	chr10	5857955	5858129	(127939293)	+	MLT1J	LTR/ERVL-MaLR	281	464	(48)	378457
1008	16.9	0.0	0.0	chr10	5858130	5858289	(127939133)	C	AluJr	SINE/Alu	(12)	300	141	378458
11982	8.6	1.4	0.3	chr10	6379785	6381346	(127416076)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	379418
698	12.3	0.0	0.0	chr10	6874703	6874816	(126922606)	C	MER121	DNA/hAT?	(175)	226	113	380184
224	26.3	24.3	0.0	chr10	15792191	15792346	(118005076)	+	L2b	LINE/L2	3158	3363	(12)	394816
6480	18.5	1.0	0.1	chr10	16822215	16823330	(116974092)	+	MSTB-int	LTR/ERVL-MaLR	1	1126	(525)	396435
10252	12.2	3.1	1.0	chr10	17281892	17283437	(116513985)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(0)	397107
18	0.0	0.0	0.0	chr10	17616645	17616664	(116180758)	+	(A)n	Simple_repeat	1	20	(0)	397751
15	25.3	1.5	4.5	chr10	17616954	17617019	(116180403)	+	(GCCCCCT)n	Simple_repeat	1	67	(0)	397752
18	8.8	2.5	4.9	chr10	17617404	17617443	(116179979)	+	(CCCCG)n	Simple_repeat	1	41	(0)	397753
207	34.9	9.8	6.4	chr10	20125258	20125679	(113671743)	+	L3	LINE/CR1	1743	2180	(1919)	401626
25040	5.0	0.2	0.1	chr10	20937454	20943602	(112853820)	+	L1PA4	LINE/L1	1	6155	(0)	402734
14	10.7	0.0	5.9	chr10	21527274	21527307	(112270115)	+	G-rich	Low_complexity	1	34	(0)	403873
24764	5.3	0.0	0.0	chr10	22060725	22066859	(111730563)	+	L1PA5	LINE/L1	12	6149	(5)	404763
22740	7.4	0.5	0.7	chr10	22089278	22095453	(111701969)	+	L1PA6	LINE/L1	175	6315	(12)	404784
11304	10.3	0.3	0.2	chr10	22129921	22131471	(111665951)	C	L1PA7	LINE/L1	(4603)	1552	1	404822
1950	10.9	10.1	5.3	chr10	22278436	22278679	(111518743)	C	MER51B	LTR/ERV1	(117)	260	1	405040
1258	20.4	2.8	1.8	chr10	22599151	22599430	(111197992)	C	L1MB8	LINE/L1	(11)	6167	5885	405492
17098	6.8	0.5	0.5	chr10	22885658	22889387	(110908035)	+	L1PA4	LINE/L1	7	3748	(2398)	405953
11168	10.1	1.3	2.5	chr10	22908111	22909710	(110887712)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	405977
12	16.9	2.9	2.8	chr10	23095584	23095618	(110701804)	+	(GCGGC)n	Simple_repeat	1	36	(0)	406263
16501	8.1	0.3	0.3	chr10	23595930	23599242	(110198180)	C	L1PA6	LINE/L1	(2842)	3304	9	407177
12	23.9	0.0	7.1	chr10	24722820	24722875	(109074547)	+	G-rich	Low_complexity	1	56	(0)	408953
2355	12.3	0.0	1.0	chr10	25157343	25157643	(108639779)	+	AluSx1	SINE/Alu	4	301	(11)	409811
11245	10.6	0.6	0.1	chr10	25356797	25358369	(108439053)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	410106
25751	5.6	0.3	0.1	chr10	25990518	25996217	(107801205)	C	L1PA5	LINE/L1	(7)	6147	435	411009
24692	5.2	0.4	0.1	chr10	27418272	27424390	(106373032)	+	L1PA4	LINE/L1	11	6154	(1)	413413
6815	10.5	0.1	0.0	chr10	27875570	27876511	(105920911)	+	L1P1	LINE/L1	11	953	(5202)	414118
251	31.6	8.4	5.1	chr10	28393801	28394017	(105403405)	+	LTR78	LTR/ERV1	24	248	(1056)	414993
249	21.3	11.6	0.0	chr10	28394169	28394229	(105403193)	+	LTR78	LTR/ERV1	504	572	(732)	414994
1344	19.1	6.0	4.7	chr10	30650257	30650370	(103147052)	+	AluJb	SINE/Alu	2	113	(199)	419155
11437	11.7	0.6	2.2	chr10	31702419	31704075	(102093347)	+	MSTA-int	LTR/ERVL-MaLR	1	1630	(1)	420620
26137	6.2	0.5	0.1	chr10	31713706	31719815	(102077607)	C	L1PA5	LINE/L1	(9)	6145	11	420634
29	33.1	1.4	0.0	chr10	31928175	31928324	(101869098)	+	(CA)n	Simple_repeat	1	152	(0)	420989
22	17.9	6.2	1.4	chr10	31928527	31928591	(101868831)	+	(CCG)n	Simple_repeat	1	69	(0)	420990
11505	10.2	0.9	0.5	chr10	31954318	31955889	(101841533)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(51)	421044
12667	9.5	0.6	0.4	chr10	32697212	32699059	(101098363)	+	L1PA5	LINE/L1	7	1858	(4326)	422256
24771	6.6	0.6	0.8	chr10	32912177	32918355	(100879067)	+	L1PA5	LINE/L1	4	6153	(1)	422464
2320	14.7	2.2	0.6	chr10	33134505	33134931	(100662491)	+	LTR45B	LTR/ERV1	3	446	(54)	422828
15681	8.5	0.4	1.9	chr10	36912320	36914176	(96883246)	C	L1PA4	LINE/L1	(4313)	1842	11	428788
24427	7.8	0.6	0.1	chr10	37044909	37050652	(96746770)	C	L1PA5	LINE/L1	(377)	5778	1	429017
17	19.1	0.0	5.7	chr10	37976528	37976580	(95820842)	+	(CCCGG)n	Simple_repeat	1	53	(0)	430348
302	24.2	1.5	0.0	chr10	42148969	42149034	(91648388)	+	MIR3	SINE/MIR	95	161	(47)	431747
25197	4.9	0.2	0.0	chr10	43716711	43722842	(90074580)	+	L1PA4	LINE/L1	11	6154	(1)	434020
24811	6.5	1.2	0.1	chr10	43914805	43920900	(89876522)	C	L1PA6	LINE/L1	(0)	6154	1	434278
17820	8.0	0.3	0.3	chr10	44480314	44482693	(89314729)	+	L1PA6	LINE/L1	4	2361	(3785)	434884
338	28.2	8.1	2.9	chr10	45000468	45000650	(88796772)	+	MIRb	SINE/MIR	14	210	(52)	435514
24	20.4	3.5	4.5	chr10	45001106	45001191	(88796231)	+	G-rich	Low_complexity	1	89	(0)	435515
288	24.5	5.4	4.5	chr10	45001361	45001471	(88795951)	C	MIR	SINE/MIR	(37)	225	114	435516
314	25.7	23.0	1.2	chr10	45001604	45001772	(88795650)	+	MIR	SINE/MIR	19	235	(27)	435517
6434	17.4	0.6	3.0	chr10	45229250	45230401	(88567021)	+	MSTB-int	LTR/ERVL-MaLR	1	1125	(526)	435845
24228	7.8	0.5	1.6	chr10	45387826	45391053	(88406369)	+	L1PA5	LINE/L1	134	3266	(2880)	436001
198	19.5	0.0	0.0	chr10	45403982	45404022	(88393400)	+	UCON132b	DNA/hAT-Tip100	100	140	(8)	436011
16	23.5	6.4	2.4	chr10	45672536	45672613	(88124809)	+	(CGCCAG)n	Simple_repeat	1	83	(0)	436407
13	36.1	0.0	2.6	chr10	45672635	45672657	(88124765)	+	(GCCC)n	Simple_repeat	1	76	(0)	436408
14	26.7	0.0	3.8	chr10	45672658	45672710	(88124712)	+	(CGCT)n	Simple_repeat	1	53	(0)	436409
26389	6.0	0.2	0.2	chr10	49419603	49425774	(84371648)	C	L1PA5	LINE/L1	(0)	6154	3	441866
10631	10.3	1.3	6.0	chr10	50922759	50924416	(82873006)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	444075
11414	10.3	0.7	0.2	chr10	52580930	52582501	(81214921)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	2	446488
16192	13.4	1.4	1.1	chr10	53111287	53115307	(80682115)	+	L1P2	LINE/L1	4	4017	(2129)	447180
23179	7.8	1.3	0.3	chr10	53370091	53376200	(80421222)	+	L1PA6	LINE/L1	5	6154	(0)	447501
12058	9.0	1.4	0.2	chr10	53909537	53911181	(79886241)	+	L1PA6	LINE/L1	5	1670	(4514)	448217
9930	12.2	3.2	4.0	chr10	54056663	54058252	(79739170)	C	THE1B-int	LTR/ERVL-MaLR	(2)	1578	1	448378
22175	8.4	1.8	0.5	chr10	54288405	54294471	(79502951)	+	L1PA6	LINE/L1	9	6149	(5)	448681
14075	6.4	0.2	0.1	chr10	55256244	55258045	(78539377)	+	L1P1	LINE/L1	6	1809	(4346)	449927
10353	13.8	1.6	0.9	chr10	55861271	55862888	(77934534)	+	THE1D-int	LTR/ERVL-MaLR	3	1631	(0)	450723
3518	13.2	3.6	7.3	chr10	56370291	56370992	(77426430)	+	LTR76	LTR/ERV1	1	675	(0)	451363
413	11.7	0.0	0.0	chr10	56370996	56371055	(77426367)	+	AluJo	SINE/Alu	242	301	(11)	451364
2313	27.1	6.6	8.4	chr10	56371056	56371610	(77425812)	C	L1MB7	LINE/L1	(508)	5673	5037	451361
5334	8.5	0.7	0.0	chr10	56502508	56503256	(77294166)	C	L1PREC2	LINE/L1	(1450)	4696	3943	451541
24449	7.3	0.8	0.3	chr10	57546283	57552369	(76245053)	C	L1PA5	LINE/L1	(5)	6149	42	452866
22771	6.8	1.2	0.1	chr10	58229728	58235826	(75561596)	+	L1PA6	LINE/L1	3	6154	(0)	453837
19	12.8	0.0	0.0	chr10	59709884	59709917	(74087505)	+	(AGG)n	Simple_repeat	1	34	(0)	455972
13	27.4	0.0	6.2	chr10	59709957	59710020	(74087402)	+	(CCCGG)n	Simple_repeat	1	64	(0)	455973
251	32.3	8.6	7.2	chr10	63781219	63781425	(70015997)	+	MamRep38	DNA/hAT	41	250	(45)	462422
330	14.8	0.0	0.0	chr10	63781447	63781500	(70015922)	+	MIR	SINE/MIR	204	257	(5)	462423
26534	6.5	0.1	0.1	chr10	63851691	63857842	(69939580)	C	L1PA5	LINE/L1	(0)	6154	1	462521
24530	7.4	0.9	0.3	chr10	65587112	65593241	(68204181)	C	L1PA5	LINE/L1	(4)	6150	4	464933
23545	7.9	0.7	0.2	chr10	66899394	66905519	(66891903)	+	L1PA6	LINE/L1	178	6314	(13)	466759
24864	7.0	0.5	0.1	chr10	67579065	67585194	(66212228)	C	L1PA5	LINE/L1	(11)	6143	4	467641
16	18.9	0.0	0.0	chr10	68527338	68527373	(65270049)	+	(GCCGCC)n	Simple_repeat	1	36	(0)	469455
2318	6.6	0.0	4.7	chr10	68527733	68527827	(65269595)	+	AluSx1	SINE/Alu	1	93	(219)	469456
2359	8.3	0.0	0.0	chr10	68527828	68528117	(65269305)	+	AluSx4	SINE/Alu	2	291	(19)	469457
363	23.9	5.1	7.1	chr10	68900517	68900647	(64896775)	+	MIR3	SINE/MIR	6	147	(121)	470388
325	30.4	4.5	8.6	chr10	69237319	69237520	(64559902)	C	L1ME4a	LINE/L1	(6)	6118	5925	471167
342	31.7	4.0	4.6	chr10	69237763	69237914	(64559508)	+	MIRc	SINE/MIR	4	154	(114)	471168
11494	11.7	1.2	0.2	chr10	70765252	70766866	(63030556)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	474085
597	26.0	7.8	0.0	chr10	70974610	70974786	(62822636)	C	L3	LINE/CR1	(15)	4084	3893	474433
2419	7.7	0.3	2.6	chr10	72269121	72269431	(61527991)	+	AluSp	SINE/Alu	1	304	(9)	476915
1567	15.2	6.9	0.4	chr10	72364745	72365013	(61432409)	C	AluJr	SINE/Alu	(18)	294	7	477119
18260	6.3	0.8	0.2	chr10	72395314	72399147	(61398275)	+	L1P2	LINE/L1	6	3843	(2303)	477190
25352	6.4	0.7	0.3	chr10	72435421	72441564	(61355858)	+	L1PA6	LINE/L1	177	6327	(0)	477279
675	35.2	13.0	3.2	chr10	72812829	72813354	(60984068)	+	MamRTE1	LINE/RTE-BovB	3082	3666	(146)	478086
23134	6.2	1.1	0.6	chr10	72989573	72993431	(60803991)	+	L1PA6	LINE/L1	4	3844	(2302)	478408
22423	6.5	1.8	0.2	chr10	73021589	73027607	(60769815)	+	L1PA6	LINE/L1	246	6324	(3)	478461
2763	17.5	27.6	2.3	chr10	73460631	73461170	(60336252)	+	MSTA-int	LTR/ERVL-MaLR	604	1347	(304)	479331
28	28.2	1.6	4.0	chr10	73495826	73495949	(60301473)	+	G-rich	Low_complexity	1	126	(0)	479398
465	21.4	1.0	3.9	chr10	75261815	75261939	(58535483)	+	MIR3	SINE/MIR	68	184	(24)	482774
25331	6.7	0.7	0.1	chr10	80304056	80309812	(53487610)	+	L1PA6	LINE/L1	174	5952	(375)	491010
28	29.6	2.6	0.9	chr10	80454073	80454185	(53343237)	+	G-rich	Low_complexity	1	116	(0)	491253
16	3.8	3.5	3.3	chr10	80454341	80454369	(53343053)	+	(GCC)n	Simple_repeat	1	30	(0)	491254
11	15.2	2.4	7.0	chr10	80454606	80454647	(53342775)	+	G-rich	Low_complexity	1	43	(0)	491255
1359	19.1	9.7	6.4	chr10	80596903	80597232	(53200190)	+	MER2	DNA/TcMar-Tigger	4	345	(0)	491480
25151	5.5	0.8	0.3	chr10	80635795	80641508	(53155914)	C	L1PA6	LINE/L1	(0)	6154	425	491551
315	24.6	21.7	0.8	chr10	80641510	80641636	(53155786)	C	MIRb	SINE/MIR	(99)	169	9	491550
24326	6.7	0.5	0.3	chr10	84971958	84978109	(48819313)	+	L1PA5	LINE/L1	4	6153	(1)	497560
7491	12.1	2.1	1.9	chr10	86238050	86238379	(47559043)	+	MSTA-int	LTR/ERVL-MaLR	475	801	(830)	499176
2233	11.2	0.0	3.2	chr10	86238380	86238690	(47558732)	+	AluSc	SINE/Alu	1	301	(8)	499178
24	22.0	3.1	1.5	chr10	87095016	87095080	(46702342)	+	(GC)n	Simple_repeat	1	67	(0)	500703
48	22.5	0.0	0.0	chr10	87095085	87095192	(46702230)	+	G-rich	Low_complexity	1	108	(0)	500704
10649	11.4	2.0	2.8	chr10	87265216	87266808	(46530614)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	501012
16653	9.9	4.0	0.3	chr10	87525540	87531312	(46266110)	C	L1PA5	LINE/L1	(0)	6154	22	501421
11579	10.1	1.1	0.3	chr10	87610871	87612437	(46184985)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	501541
22	22.5	0.0	7.8	chr10	87863404	87863493	(45933929)	+	(CTCCC)n	Simple_repeat	1	90	(0)	501930
16	9.3	2.6	5.1	chr10	87863519	87863556	(45933866)	+	(GGCG)n	Simple_repeat	1	39	(0)	501931
22	30.2	2.0	2.9	chr10	87863717	87863818	(45933604)	+	(CGG)n	Simple_repeat	1	104	(0)	501932
515	33.7	2.3	1.7	chr10	87979755	87979926	(45817496)	+	MIR3	SINE/MIR	3	175	(33)	502083
1278	17.1	3.0	9.7	chr10	87980014	87980252	(45817170)	+	MER33	DNA/hAT-Charlie	1	220	(104)	502084
24656	6.7	0.8	0.5	chr10	88350240	88356365	(45441057)	C	L1PA5	LINE/L1	(8)	6146	1	502710
16684	7.6	0.4	0.2	chr10	88443340	88446691	(45350731)	+	L1PA5	LINE/L1	11	3366	(2780)	502825
24919	5.8	0.3	2.5	chr10	88628463	88634738	(45162684)	C	L1PA5	LINE/L1	(12)	6142	11	503112
477	34.5	11.6	5.6	chr10	88644248	88645007	(45152415)	+	L2b	LINE/L2	2433	3356	(19)	503121
296	34.6	2.5	1.3	chr10	88645033	88645187	(45152235)	C	MER5A	DNA/hAT-Charlie	(32)	157	1	503122
3366	20.5	2.2	4.8	chr10	89112098	89113419	(44684003)	C	L1MA7	LINE/L1	(468)	5823	4609	503875
12429	9.6	0.2	0.3	chr10	89253577	89255158	(44542264)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	504106
24124	6.7	0.4	0.1	chr10	90113090	90119061	(43678361)	C	L1PA5	LINE/L1	(11)	6143	152	505411
301	26.5	12.6	0.8	chr10	93496848	93496980	(40300442)	C	MIRb	SINE/MIR	(24)	244	94	511238
26809	5.0	0.6	0.0	chr10	93520974	93527095	(40270327)	+	L1PA4	LINE/L1	1	6155	(0)	511295
26211	6.2	0.9	0.4	chr10	93927700	93933826	(39863596)	+	L1PA5	LINE/L1	3	6154	(0)	512052
8316	17.2	4.9	1.3	chr10	94009451	94011040	(39786382)	C	MSTB-int	LTR/ERVL-MaLR	(0)	1651	1	512195
23829	6.5	0.4	0.1	chr10	94695557	94701636	(39095786)	+	L1PA4	LINE/L1	61	6155	(0)	513455
10390	11.2	4.0	1.8	chr10	94743889	94744696	(39052726)	+	THE1B-int	LTR/ERVL-MaLR	1	861	(719)	513502
2119	13.6	0.0	0.7	chr10	94744697	94744991	(39052431)	+	AluSx1	SINE/Alu	1	293	(19)	513503
17240	10.1	2.4	0.1	chr10	94954907	94960759	(38836663)	C	L1PA4	LINE/L1	(0)	6155	7	513673
25250	6.7	0.4	0.1	chr10	95058651	95064584	(38732838)	C	L1PA5	LINE/L1	(7)	6147	193	513760
16806	6.7	0.9	0.1	chr10	95775607	95778280	(38019142)	C	L1P2	LINE/L1	(3462)	2684	4	514884
450	28.9	3.5	8.9	chr10	96224998	96225090	(37572332)	+	MIRb	SINE/MIR	133	225	(43)	515579
17	10.9	7.5	0.0	chr10	96754118	96754157	(37043265)	+	GA-rich	Low_complexity	1	43	(0)	516587
687	18.1	1.4	0.7	chr10	97210768	97210906	(36586516)	+	MER33	DNA/hAT-Charlie	37	176	(148)	517474
467	35.5	3.1	0.0	chr10	97446519	97446673	(36350749)	C	MIR3	SINE/MIR	(21)	187	28	518010
1676	15.2	1.0	4.0	chr10	97634007	97634308	(36163114)	+	AluJo	SINE/Alu	1	293	(19)	518387
3812	14.7	11.7	3.7	chr10	97634310	97634658	(36162764)	C	MER4D1	LTR/ERV1	(31)	869	417	518388
15	22.6	2.1	2.0	chr10	97850128	97850175	(35947247)	+	(CCGC)n	Simple_repeat	1	49	(0)	518875
15	23.7	2.0	1.9	chr10	97850375	97850425	(35946997)	+	G-rich	Low_complexity	1	52	(0)	518876
23787	7.0	1.1	1.1	chr10	98177041	98183177	(35614245)	C	L1PA6	LINE/L1	(10)	6317	174	519509
25204	8.0	1.1	0.1	chr10	99099017	99105074	(34692348)	+	L1PA5	LINE/L1	11	6154	(0)	520936
26062	6.2	0.9	0.1	chr10	99640566	99646687	(34150735)	C	L1PA5	LINE/L1	(0)	6154	4	521857
1415	18.5	0.0	0.9	chr10	99650179	99650405	(34147017)	C	AluJb	SINE/Alu	(13)	299	75	521860
3435	15.1	3.6	0.7	chr10	99650409	99651278	(34146144)	C	L1M2a1	LINE/L1	(6061)	1055	4	521861
26632	4.9	0.1	0.4	chr10	100406331	100412500	(33384922)	+	L1PA4	LINE/L1	1	6153	(2)	523297
25842	5.9	1.7	0.3	chr10	100454491	100460565	(33336857)	+	L1PA5	LINE/L1	4	6149	(5)	523408
12	4.7	0.0	7.7	chr10	101050378	101050403	(32747019)	+	(CGCC)n	Simple_repeat	1	26	(0)	524384
20	18.0	0.0	5.4	chr10	102643549	102643604	(31153818)	+	G-rich	Low_complexity	1	56	(0)	527308
11998	9.3	0.3	0.0	chr10	103133634	103135208	(30662214)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	528266
10636	11.6	1.1	2.9	chr10	109260998	109262605	(24534817)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	537749
11329	9.6	2.2	0.1	chr10	109294230	109295776	(24501646)	+	THE1B-int	LTR/ERVL-MaLR	2	1580	(0)	537801
478	21.4	5.1	7.1	chr10	109951149	109951289	(23846133)	C	MER112	DNA/hAT-Charlie	(120)	141	4	538662
415	28.9	1.9	11.8	chr10	109951362	109951589	(23845833)	+	MLT1K	LTR/ERVL-MaLR	14	218	(324)	538663
2669	6.2	1.2	0.3	chr10	110330646	110330986	(23466436)	+	LTR14A	LTR/ERVK	1	344	(0)	539276
9441	7.1	0.1	1.1	chr10	110469604	110470536	(23326886)	C	L1PA6	LINE/L1	(1124)	5022	4089	539574
4836	8.4	0.3	0.0	chr10	110470528	110471171	(23326251)	C	L1PA6	LINE/L1	(5534)	650	5	539574
12245	10.0	0.8	0.1	chr10	111461413	111462979	(22334443)	+	THE1B-int	LTR/ERVL-MaLR	3	1580	(0)	541155
15	21.8	0.0	0.0	chr10	114821988	114822024	(18975398)	+	(GCG)n	Simple_repeat	1	37	(0)	546602
5547	10.2	1.1	1.6	chr10	115103662	115105230	(18692192)	C	L1MA3	LINE/L1	(265)	6040	4477	547083
8992	9.1	1.8	0.0	chr10	115105231	115106492	(18690930)	+	THE1A-int	LTR/ERVL-MaLR	296	1580	(0)	547084
9739	15.7	0.7	1.3	chr10	117027838	117029477	(16767945)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	549737
322	37.8	5.7	2.5	chr10	117170464	117170752	(16626670)	+	L2a	LINE/L2	3024	3382	(44)	549989
349	30.5	3.0	2.3	chr10	117231189	117231319	(16566103)	+	MIR3	SINE/MIR	51	182	(26)	550115
11482	8.6	1.8	0.4	chr10	117303001	117304557	(16492865)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	550208
1225	21.9	6.2	1.6	chr10	117572049	117572355	(16225067)	C	LTR16	LTR/ERVL	(21)	417	96	550690
37	23.4	1.0	1.9	chr10	119542653	119542755	(14254667)	+	GA-rich	Low_complexity	1	104	(0)	554096
26179	5.6	0.6	0.4	chr10	120445069	120451214	(13346208)	+	L1PA5	LINE/L1	1	6154	(0)	555666
365	37.1	1.9	0.5	chr10	120508999	120509201	(13288221)	+	MIR	SINE/MIR	50	255	(7)	555766
843	22.1	11.4	6.5	chr10	121726726	121727107	(12070315)	+	LTR16A1	LTR/ERVL	54	456	(0)	557624
25158	6.7	1.2	0.2	chr10	125647552	125653649	(8143773)	+	L1PA5	LINE/L1	5	6154	(0)	563834
2077	27.4	6.5	2.7	chr10	125885745	125886441	(7910981)	+	L2a	LINE/L2	2614	3340	(86)	564143
16	22.7	0.0	0.0	chr10	125896669	125896709	(7900713)	+	G-rich	Low_complexity	1	41	(0)	564165
2566	6.7	0.0	1.9	chr10	125904844	125905159	(7892263)	+	AluY	SINE/Alu	1	310	(1)	564181
693	8.8	21.1	4.0	chr10	125905170	125905294	(7892128)	+	FAM	SINE/Alu	20	171	(14)	564182
528	22.7	7.4	0.6	chr10	125905314	125905490	(7891932)	C	L1MEg	LINE/L1	(2550)	3596	3407	564180
231	23.5	6.9	1.2	chr10	125905712	125905793	(7891629)	C	L1M5	LINE/L1	(2474)	3672	3586	564183
518	11.8	0.0	0.0	chr10	125905796	125905863	(7891559)	+	FAM	SINE/Alu	20	87	(98)	564184
24520	6.9	0.6	0.1	chr10	128223553	128229710	(5567712)	C	L1PA6	LINE/L1	(0)	6327	183	567191
11945	8.3	2.1	0.8	chr10	132216498	132217560	(1579862)	+	THE1B-int	LTR/ERVL-MaLR	493	1580	(0)	571424
16	6.3	9.1	0.0	chr10	133160349	133160381	(637041)	+	(GGCG)n	Simple_repeat	1	36	(0)	572212
11123	9.8	1.1	0.9	chr10	133494171	133495742	(301680)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	6	572570
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
17	24.1	1.6	3.2	chr11	910821	910882	(134175740)	+	(CGCGCCG)n	Simple_repeat	1	63	(0)	574078
12	19.6	0.0	8.3	chr11	910881	910928	(134175694)	+	(GCTGG)n	Simple_repeat	1	48	(0)	574079
36	0.0	2.7	0.0	chr11	910938	910974	(134175648)	+	(CGGGGC)n	Simple_repeat	1	38	(0)	574080
26383	6.0	0.4	0.9	chr11	2634175	2640355	(132446267)	C	L1PA5	LINE/L1	(5)	6149	2	576009
278	25.0	12.9	5.0	chr11	2653010	2653358	(132433264)	C	LTR85b	LTR/Gypsy?	(260)	524	101	576019
752	26.7	11.3	11.3	chr11	2653382	2653963	(132432659)	C	MLT1K	LTR/ERVL-MaLR	(10)	585	4	576020
622	31.6	11.4	4.6	chr11	3518249	3518479	(131568143)	+	L2b	LINE/L2	2233	2467	(952)	577139
23154	8.0	1.7	1.1	chr11	4531438	4534700	(130551922)	+	L1PA6	LINE/L1	178	3437	(2882)	578906
16678	5.6	0.5	0.1	chr11	5914494	5918448	(129168174)	+	L1HS	LINE/L1	136	4103	(2043)	580635
3899	18.1	1.9	4.5	chr11	6666934	6668072	(128418550)	C	L1MB7	LINE/L1	(5228)	1523	335	581632
10080	11.5	5.0	0.5	chr11	7285540	7287047	(127799575)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	582489
381	26.2	9.0	0.0	chr11	8688629	8688769	(126397853)	C	Charlie2a	DNA/hAT-Charlie	(1199)	1662	1508	584345
12	21.1	0.0	7.8	chr11	9664024	9664074	(125422548)	+	G-rich	Low_complexity	1	51	(0)	586301
15	25.2	1.7	3.3	chr11	9758131	9758190	(125328432)	+	(GTGGC)n	Simple_repeat	1	61	(0)	586500
291	24.2	10.8	0.8	chr11	9758475	9758607	(125328015)	C	MIR	SINE/MIR	(68)	194	47	586501
17266	12.5	0.6	1.9	chr11	9930626	9933967	(125152655)	+	L1PA6	LINE/L1	174	3493	(2834)	586795
11722	9.4	0.4	0.1	chr11	10134357	10135930	(124950692)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	2	587094
10592	10.6	3.1	3.7	chr11	10218440	10220029	(124866593)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	587205
16	12.7	6.7	2.1	chr11	10792708	10792752	(124293870)	+	G-rich	Low_complexity	1	48	(0)	588141
26675	5.6	0.3	0.1	chr11	11711307	11717431	(123369191)	C	L1PA4	LINE/L1	(11)	6144	11	589619
184	36.5	3.0	0.0	chr11	11756727	11756822	(123329800)	+	MER5B	DNA/hAT-Charlie	80	178	(0)	589689
1035	17.9	1.4	11.9	chr11	11757114	11757348	(123329274)	C	MER20	DNA/hAT-Charlie	(6)	213	4	589690
276	31.2	3.5	0.0	chr11	12292741	12292849	(122793773)	C	L2a	LINE/L2	(0)	3426	3314	590568
11555	9.7	0.8	0.1	chr11	13812227	13813792	(121272830)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	3	592862
24979	6.6	1.0	0.1	chr11	14594761	14600876	(120485746)	C	L1PA6	LINE/L1	(1)	6153	5	594237
23886	6.9	1.7	0.6	chr11	14777676	14783773	(120302849)	+	L1PA5	LINE/L1	4	6153	(1)	594495
12	18.2	2.4	4.8	chr11	16604682	16604722	(118481900)	+	(CAGCC)n	Simple_repeat	1	42	(0)	597231
20956	11.9	2.3	1.3	chr11	16628650	16633177	(118453445)	C	L1PA16	LINE/L1	(1526)	5323	734	597253
25598	5.6	0.5	0.4	chr11	16637914	16644048	(118442574)	C	L1PA5	LINE/L1	(1)	6153	11	597259
27210	3.9	0.1	0.2	chr11	17028491	17034655	(118051967)	C	L1PA2	LINE/L1	(0)	6155	1	597925
25	24.8	3.2	5.4	chr11	17389112	17389237	(117697385)	+	(CGCCCG)n	Simple_repeat	1	130	(0)	598662
16	29.6	0.0	3.1	chr11	17389214	17389278	(117697344)	+	(CCGT)n	Simple_repeat	1	65	(0)	598663
193	32.9	3.5	1.2	chr11	17546930	17547012	(117539610)	+	MIR3	SINE/MIR	107	191	(17)	598934
17781	7.0	0.1	0.6	chr11	18127076	18128929	(116957693)	C	L1PA6	LINE/L1	(4310)	1845	1	599949
26535	5.9	0.2	0.1	chr11	18157792	18163940	(116922682)	+	L1PA4	LINE/L1	3	6153	(2)	599995
26528	5.2	0.2	0.2	chr11	19581372	19587519	(115499103)	C	L1PA4	LINE/L1	(2)	6153	7	602489
11942	8.8	0.9	0.1	chr11	19611317	19612883	(115473739)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	602535
11743	10.5	3.7	0.1	chr11	20706688	20708472	(114378150)	C	L1PA5	LINE/L1	(4328)	1856	4	604346
1470	30.0	16.1	1.4	chr11	23174283	23175158	(111911464)	C	L2a	LINE/L2	(33)	3393	2348	607994
24925	7.0	0.6	0.4	chr11	23320988	23327130	(111759492)	+	L1PA5	LINE/L1	4	6148	(6)	608197
10057	13.6	3.2	1.8	chr11	23717244	23718424	(111368198)	+	MSTA-int	LTR/ERVL-MaLR	1	1166	(465)	608745
24945	6.8	0.5	0.0	chr11	25831295	25837418	(109249204)	+	L1PA5	LINE/L1	5	6149	(5)	611587
9974	13.4	1.4	6.1	chr11	26783401	26784798	(108301824)	+	THE1D-int	LTR/ERVL-MaLR	3	1330	(301)	612963
16884	8.3	0.5	1.5	chr11	26882201	26883939	(108202683)	+	L1PA3	LINE/L1	176	1894	(4463)	613095
277	23.7	11.9	7.1	chr11	27362519	27362645	(107723977)	+	Charlie4z	DNA/hAT-Charlie	31	164	(3)	613837
18	27.4	4.0	0.0	chr11	27362890	27362963	(107723659)	+	(TCATCG)n	Simple_repeat	1	77	(0)	613838
12	17.7	3.1	0.0	chr11	27363015	27363046	(107723576)	+	(GCGGCA)n	Simple_repeat	1	33	(0)	613839
14	8.3	0.0	3.6	chr11	27472006	27472033	(107614589)	+	(GGGCG)n	Simple_repeat	1	28	(0)	613998
23419	7.0	0.9	0.0	chr11	30062543	30067760	(105018862)	C	L1PA6	LINE/L1	(896)	5250	3	617883
24985	6.5	0.6	0.2	chr11	32661713	32667810	(102418812)	C	L1PA5	LINE/L1	(29)	6125	1	622031
17413	10.2	4.8	0.5	chr11	32762629	32768484	(102318138)	+	L1PA5	LINE/L1	2	6154	(0)	622162
17	26.8	3.8	2.4	chr11	34052227	34052305	(101034317)	+	(GCGCCC)n	Simple_repeat	1	82	(0)	624603
937	15.4	0.6	4.0	chr11	35090900	35091075	(99995547)	+	MLT1A0	LTR/ERVL-MaLR	1	170	(195)	626238
24378	6.2	0.9	0.3	chr11	35091076	35096771	(99989851)	+	L1PA6	LINE/L1	440	6139	(15)	626239
23779	6.6	1.3	0.2	chr11	35773475	35779564	(99307058)	C	L1PA5	LINE/L1	(3)	6151	11	627310
23	25.9	4.8	1.8	chr11	35943954	35944057	(99142565)	+	G-rich	Low_complexity	1	109	(0)	627608
33	0.0	0.0	0.0	chr11	35944174	35944204	(99142418)	+	(CGCGGGG)n	Simple_repeat	1	31	(0)	627609
18	7.9	3.7	0.0	chr11	35944448	35944474	(99142148)	+	(GT)n	Simple_repeat	1	28	(0)	627610
18	13.4	4.9	0.0	chr11	35944476	35944516	(99142106)	+	GA-rich	Low_complexity	1	43	(0)	627611
9377	16.2	1.0	2.5	chr11	36978307	36979542	(98107080)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	401	629250
10807	11.6	1.1	0.1	chr11	37694818	37696382	(97390240)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	630219
10426	13.8	1.0	0.4	chr11	42143977	42145005	(92941617)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	598	636463
2201	13.8	0.0	0.0	chr11	42145006	42145310	(92941312)	C	AluSx	SINE/Alu	(7)	305	1	636464
15	4.7	0.0	0.0	chr11	43358854	43358875	(91727747)	+	(CTC)n	Simple_repeat	1	22	(0)	638336
15420	10.2	3.3	0.8	chr11	44395508	44397290	(90689332)	C	L1PA5	LINE/L1	(4302)	1853	11	640033
18	0.0	0.0	0.0	chr11	45872587	45872609	(89214013)	+	(ATA)n	Simple_repeat	1	23	(0)	642951
37	4.3	4.2	0.0	chr11	46121156	46121203	(88965419)	+	(CT)n	Simple_repeat	1	50	(0)	643314
16	21.7	0.0	0.0	chr11	46121236	46121267	(88965355)	+	G-rich	Low_complexity	1	32	(0)	643315
13	8.9	0.0	3.9	chr11	46121400	46121425	(88965197)	+	(CAG)n	Simple_repeat	1	26	(0)	643316
21	25.1	4.2	3.0	chr11	46121485	46121519	(88965103)	+	(CGCCCG)n	Simple_repeat	1	94	(0)	643317
26	7.9	7.3	1.7	chr11	46121520	46121574	(88965048)	+	(CCG)n	Simple_repeat	1	59	(0)	643318
13	6.8	0.0	10.5	chr11	46121702	46121753	(88964869)	+	(CCGGCC)n	Simple_repeat	1	46	(0)	643319
17254	5.6	1.3	0.7	chr11	47118178	47119591	(87967031)	C	L1PA6	LINE/L1	(4751)	1433	3	645276
253	31.9	8.1	0.0	chr11	47348983	47349073	(87737549)	C	MER91B	DNA/hAT-Tip100	(10)	180	82	645715
350	27.5	1.8	6.0	chr11	47349282	47349397	(87737225)	+	MIR3	SINE/MIR	82	192	(16)	645716
14	5.0	0.0	0.0	chr11	47988128	47988148	(87098474)	+	(TGAG)n	Simple_repeat	1	21	(0)	647296
1480	20.6	14.5	5.7	chr11	48173260	48173754	(86912868)	+	MLT1F	LTR/ERVL-MaLR	1	546	(2)	647705
24259	6.6	0.3	0.0	chr11	48230674	48236801	(86849821)	C	L1PA5	LINE/L1	(3)	6151	7	647805
15669	7.3	1.0	0.2	chr11	50004988	50009194	(85077428)	+	L1PA4	LINE/L1	2	4246	(1900)	649771
24127	6.7	0.3	0.4	chr11	57062753	57068922	(78017700)	+	L1PA5	LINE/L1	1	6154	(0)	652974
227	23.7	5.0	7.3	chr11	57657196	57657277	(77429345)	C	L2a	LINE/L2	(0)	3426	3347	654218
25305	6.2	0.5	0.1	chr11	57847853	57853990	(77232632)	+	L1PA6	LINE/L1	5	6152	(2)	654576
6168	10.8	0.9	2.2	chr11	58815760	58815969	(76270653)	C	L1PA7	LINE/L1	(1500)	4646	4438	655997
25025	7.2	0.6	0.1	chr11	58815979	58822098	(76264524)	+	L1PA5	LINE/L1	1	6151	(3)	655999
20772	9.9	1.1	0.4	chr11	58983952	58990073	(76096549)	C	L1PA6	LINE/L1	(4)	6150	5	656205
22650	7.8	1.0	0.4	chr11	59315472	59321591	(75765031)	C	L1PA6	LINE/L1	(2)	6152	5	656621
6567	11.6	2.4	2.2	chr11	60618205	60619209	(74467413)	C	LTR13	LTR/ERVK	(0)	1007	1	658591
27	36.3	3.1	2.0	chr11	61482956	61483147	(73603475)	+	(TCCCCA)n	Simple_repeat	1	198	(0)	660277
15	9.9	2.8	5.4	chr11	61580858	61580893	(73505729)	+	(GCC)n	Simple_repeat	1	37	(0)	660441
356	8.0	0.0	0.0	chr11	62791031	62791080	(72295542)	C	Alu	SINE/Alu	(10)	291	242	662812
223	28.1	16.2	1.7	chr11	62791093	62791208	(72295414)	C	MIRb	SINE/MIR	(59)	209	74	662813
2009	7.5	5.1	0.7	chr11	62791264	62791542	(72295080)	C	AluSc8	SINE/Alu	(19)	292	1	662814
25693	6.3	0.6	0.0	chr11	63036318	63042433	(72044189)	C	L1PA5	LINE/L1	(0)	6154	2	663356
24256	6.2	0.1	0.0	chr11	63185546	63191694	(71894928)	C	L1PA2	LINE/L1	(3)	6152	1	663500
27	11.5	0.0	0.0	chr11	63373108	63373146	(71713476)	+	(T)n	Simple_repeat	1	39	(0)	663648
183	26.5	8.1	5.6	chr11	65541044	65541115	(69545507)	C	MIRb	SINE/MIR	(95)	173	100	667740
13	31.5	0.0	3.2	chr11	65961813	65961874	(69124748)	+	(GGC)n	Simple_repeat	1	62	(0)	668549
12	18.5	0.0	9.6	chr11	66042820	66042871	(69043751)	+	(CGCGCCT)n	Simple_repeat	1	52	(0)	668718
13	16.2	0.0	5.3	chr11	66371654	66371691	(68714931)	+	G-rich	Low_complexity	1	38	(0)	669343
21	17.0	0.0	2.1	chr11	67630265	67630312	(67456310)	+	G-rich	Low_complexity	1	48	(0)	672002
8095	17.2	2.3	3.4	chr11	68303793	68305073	(66781549)	+	MSTA-int	LTR/ERVL-MaLR	375	1651	(0)	673178
11	16.9	2.9	2.8	chr11	68839232	68839266	(66247356)	+	(CCGCCG)n	Simple_repeat	1	36	(0)	674056
280	28.6	9.7	5.4	chr11	69154803	69155138	(65931484)	C	LTR16A2	LTR/ERVL	(79)	416	65	674607
1069	23.6	13.1	5.9	chr11	70371122	70371431	(64715191)	C	L1MD	LINE/L1	(3227)	2919	2548	676745
616	22.2	3.5	4.0	chr11	70371541	70371742	(64714880)	C	L1M4	LINE/L1	(3463)	2683	2483	676741
8402	20.9	1.4	1.5	chr11	72208281	72209123	(62877499)	+	L1MB2	LINE/L1	703	1549	(5104)	679550
274	25.3	0.0	0.0	chr11	72223701	72223779	(62862843)	C	MIR1_Amn	SINE/MIR	(77)	153	75	679579
29	24.4	3.2	1.0	chr11	72223794	72223887	(62862735)	+	(GCGCG)n	Simple_repeat	1	97	(0)	679580
23798	6.9	1.6	0.2	chr11	74059665	74063902	(61022720)	+	L1PA5	LINE/L1	4	4276	(1870)	683337
16607	8.0	0.7	0.0	chr11	74360442	74362745	(60723877)	+	L1PA5	LINE/L1	21	2339	(3807)	683908
12042	8.8	0.3	0.0	chr11	74658397	74659971	(60426651)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	684555
9351	12.4	4.2	2.2	chr11	76334414	76335853	(58750769)	+	MSTA-int	LTR/ERVL-MaLR	162	1631	(0)	687809
2326	8.4	0.0	0.0	chr11	76606978	76607263	(58479359)	C	AluSz	SINE/Alu	(14)	298	13	688320
520	29.2	15.1	10.7	chr11	76607264	76607305	(58479317)	+	L2a	LINE/L2	2871	2914	(505)	688318
452	27.6	12.7	1.3	chr11	76607306	76607536	(58479086)	+	MER112	DNA/hAT-Charlie	1	261	(0)	688321
192	20.0	0.0	0.0	chr11	77035579	77035618	(58051004)	C	L2b	LINE/L2	(233)	3142	3103	689136
17240	7.8	4.7	1.1	chr11	77218394	77224331	(57862291)	C	L1PA6	LINE/L1	(4)	6323	174	689449
1199	20.8	5.2	2.4	chr11	77654396	77654730	(57431892)	+	L1MB7	LINE/L1	5016	5360	(786)	690329
897	17.4	0.6	3.6	chr11	77654766	77654932	(57431690)	C	FRAM	SINE/Alu	(10)	166	5	690340
1748	17.9	0.0	2.1	chr11	77654944	77655234	(57431388)	C	AluJr	SINE/Alu	(17)	295	11	690341
10336	13.8	0.6	3.1	chr11	77854291	77855312	(57231310)	C	MSTA-int	LTR/ERVL-MaLR	(71)	1560	539	690736
345	27.1	6.0	2.1	chr11	79193217	79193359	(55893263)	C	MIRc	SINE/MIR	(118)	150	2	693435
14699	8.3	2.5	0.3	chr11	82878581	82880656	(52205966)	C	L1P2	LINE/L1	(4057)	2127	4	699636
14	13.1	0.0	0.0	chr11	82892965	82892990	(52193632)	+	(GTAG)n	Simple_repeat	1	26	(0)	699655
313	34.9	7.7	3.4	chr11	82893057	82893379	(52193243)	+	MLT1I	LTR/ERVL-MaLR	74	411	(0)	699656
23474	6.6	1.8	0.9	chr11	83266135	83272255	(51814367)	+	L1PA6	LINE/L1	176	6322	(5)	700351
22104	7.5	1.5	1.5	chr11	87502213	87508384	(47578238)	C	L1PA6	LINE/L1	(0)	6154	4	707243
25595	6.0	0.2	0.4	chr11	88218194	88224363	(46862259)	C	L1PA4	LINE/L1	(0)	6155	3	708247
25244	7.0	0.5	0.0	chr11	88240495	88246620	(46840002)	+	L1PA5	LINE/L1	1	6154	(0)	708265
23835	7.3	0.7	0.2	chr11	88772452	88778587	(46308035)	C	L1PA6	LINE/L1	(2)	6152	5	709060
25154	6.5	0.6	0.0	chr11	89426248	89432359	(45654263)	+	L1PA5	LINE/L1	11	6151	(3)	710028
10413	7.3	0.7	0.0	chr11	90240088	90241455	(44845167)	+	L1P1	LINE/L1	17	1394	(4761)	711200
15857	7.3	1.1	0.2	chr11	92615547	92618608	(42468014)	C	L1MB8	LINE/L1	(3065)	3081	4	714424
27930	4.5	1.6	0.6	chr11	93172448	93178521	(41908101)	C	L1PA2	LINE/L1	(2)	6153	11	715213
25019	6.9	1.1	0.0	chr11	93458096	93464200	(41622422)	+	L1PA6	LINE/L1	177	6321	(6)	715599
23739	6.5	0.4	0.5	chr11	94094017	94100160	(40986462)	C	L1PA5	LINE/L1	(18)	6136	1	716679
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
18300	3.7	0.3	0.1	chr11	94238529	94241278	(40845344)	C	L1PA4	LINE/L1	(372)	5782	3028	716863
25140	7.4	0.2	0.5	chr11	94358729	94364906	(40721716)	+	L1PA5	LINE/L1	6	6151	(3)	717023
12	4.3	8.3	0.0	chr11	95092696	95092719	(39993903)	+	(GGGA)n	Simple_repeat	1	26	(0)	718115
11	20.8	0.0	2.9	chr11	95092709	95092743	(39993879)	+	(GGAGGT)n	Simple_repeat	1	35	(0)	718116
1629	28.9	5.4	0.8	chr11	95734076	95734566	(39352056)	C	LTR33A_	LTR/ERVL	(0)	531	17	719074
20525	7.7	1.4	0.2	chr11	95870738	95876262	(39210360)	C	L1PA4	LINE/L1	(2)	6153	487	719264
10527	13.1	1.7	2.1	chr11	95943996	95945631	(39140991)	+	THE1D-int	LTR/ERVL-MaLR	3	1631	(0)	719367
16337	8.1	0.2	0.1	chr11	98996453	99000000	(36086622)	+	L1P1	LINE/L1	11	3561	(2585)	723208
23852	7.6	0.5	1.1	chr11	100895843	100902045	(34184577)	C	L1PA6	LINE/L1	(2)	6325	174	725680
24772	7.2	0.4	0.2	chr11	101638967	101645043	(33441579)	+	L1PA6	LINE/L1	188	6322	(5)	726675
7953	8.4	0.7	0.0	chr11	102300485	102301496	(32785126)	C	L1PA6	LINE/L1	(5161)	1023	5	727724
11020	10.2	4.0	4.2	chr11	102432082	102433664	(32652958)	+	THE1-int	LTR/ERVL-MaLR	1	1580	(0)	727929
24847	5.7	0.4	0.1	chr11	103386500	103392632	(31693990)	C	L1PA4	LINE/L1	(0)	6155	2	729378
15443	7.8	1.2	0.3	chr11	108440856	108444618	(26642004)	+	L1P2	LINE/L1	4	3789	(2357)	736824
8827	18.1	1.3	2.0	chr11	110784873	110786534	(24300088)	+	MSTB-int	LTR/ERVL-MaLR	1	1651	(0)	740330
347	31.1	16.8	6.5	chr11	111199734	111200133	(23886489)	+	L2c	LINE/L2	2921	3382	(5)	741018
24540	6.5	0.6	0.3	chr11	112005935	112011965	(23074657)	+	L1PA6	LINE/L1	125	6154	(0)	742376
6208	17.6	2.9	0.7	chr11	114938245	114939341	(20147281)	+	MSTA-int	LTR/ERVL-MaLR	1	1122	(529)	746931
5690	20.9	5.0	2.6	chr11	116664583	116666720	(18419902)	+	L1M3f	LINE/L1	1251	3450	(4115)	749729
24084	7.0	1.1	0.7	chr11	116666719	116672862	(18413760)	+	L1PA6	LINE/L1	174	6325	(2)	749730
2113	12.0	0.7	0.0	chr11	118987200	118987500	(16099122)	C	AluSx3	SINE/Alu	(8)	303	1	754030
837	33.6	9.7	5.8	chr11	118987501	118987971	(16098651)	C	L2c	LINE/L2	(337)	3082	2572	754028
20	25.3	0.0	0.0	chr11	120325238	120325300	(14761322)	+	(CCTCCG)n	Simple_repeat	1	63	(0)	756368
9445	15.1	2.3	0.4	chr11	120617915	120619514	(14467108)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	756863
9695	17.0	4.1	2.0	chr11	121262921	121264845	(13821777)	C	L1MB7	LINE/L1	(4603)	2962	655	757843
2638	15.6	3.7	0.8	chr11	121264849	121265320	(13821302)	+	MER66B	LTR/ERV1	1	486	(0)	757845
7468	10.6	1.6	0.0	chr11	123662598	123663599	(11423023)	C	THE1B-int	LTR/ERVL-MaLR	(562)	1018	1	761950
23522	6.1	0.6	0.2	chr11	124962649	124968793	(10117829)	C	L1PA6	LINE/L1	(0)	6327	174	763829
539	29.1	6.1	0.9	chr11	128023875	128024106	(7062516)	+	MIR	SINE/MIR	3	247	(15)	768349
302	25.4	3.5	12.1	chr11	130637228	130637300	(4449322)	C	MIR	SINE/MIR	(3)	259	194	772202
1835	16.2	0.0	4.4	chr11	130637301	130637620	(4449002)	C	AluJb	SINE/Alu	(6)	306	1	772203
10853	9.3	3.1	6.0	chr11	132724548	132725721	(2360901)	C	THE1B-int	LTR/ERVL-MaLR	(1)	1579	380	774974
80	22.5	3.2	4.4	chr11	133082354	133082637	(2003985)	+	(CCCCCT)n	Simple_repeat	1	293	(0)	775452
34	8.0	1.8	1.8	chr11	133083111	133083165	(2003457)	+	(CA)n	Simple_repeat	1	56	(0)	775453
701	28.0	6.4	0.0	chr11	133681230	133681447	(1405175)	+	MIRb	SINE/MIR	36	268	(0)	776242
559	28.2	0.6	2.3	chr11	133681453	133681626	(1404996)	+	MIRb	SINE/MIR	71	241	(27)	776243
1010	30.1	10.2	3.4	chr11	134594480	134594936	(491686)	C	L1ME1	LINE/L1	(5849)	551	39	777423
193	25.6	9.9	0.0	chr12	459048	459129	(132816180)	+	MIRc	SINE/MIR	80	170	(98)	778789
1068	16.3	0.0	0.0	chr12	459154	459319	(132815990)	C	AluJb	SINE/Alu	(17)	295	130	778790
2462	6.0	0.0	0.3	chr12	950290	950587	(132324722)	+	AluYm1	SINE/Alu	1	297	(14)	779754
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
199	37.4	6.5	1.5	chr12	3173276	3173498	(130101811)	+	L2b	LINE/L2	2977	3205	(182)	783451
1642	16.3	6.2	1.4	chr12	3173499	3173792	(130101517)	C	AluJr4	SINE/Alu	(2)	310	2	783452
294	33.5	8.2	5.2	chr12	3236865	3237135	(130038174)	C	L2b	LINE/L2	(21)	3354	3075	783547
23071	6.6	0.6	0.4	chr12	3851136	3857278	(129418031)	+	L1PA6	LINE/L1	174	6316	(11)	784494
1477	21.1	4.3	11.4	chr12	4073591	4073760	(129201549)	+	MLT1A	LTR/ERVL-MaLR	1	162	(212)	784888
34	3.0	0.0	0.0	chr12	4073761	4073794	(129201515)	+	(TC)n	Simple_repeat	1	34	(0)	784889
1477	21.1	4.3	11.4	chr12	4073795	4073838	(129201471)	+	MLT1A	LTR/ERVL-MaLR	163	175	(199)	784888
45	2.4	0.0	0.0	chr12	4073839	4073881	(129201428)	+	(CT)n	Simple_repeat	1	43	(0)	784890
1477	21.1	4.3	11.4	chr12	4073882	4074067	(129201242)	+	MLT1A	LTR/ERVL-MaLR	176	372	(2)	784888
3156	20.1	2.6	2.1	chr12	4074068	4074694	(129200615)	C	L1MC3	LINE/L1	(83)	7702	7069	784887
11800	8.4	1.1	3.1	chr12	5823121	5824732	(127450577)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	787568
1217	24.1	7.9	7.9	chr12	6137997	6138136	(127137173)	C	MLT1C	LTR/ERVL-MaLR	(330)	137	6	788083
656	25.8	5.2	1.2	chr12	6138142	6138306	(127137003)	C	MIRb	SINE/MIR	(82)	186	15	788086
324	21.4	14.3	9.2	chr12	6138374	6138415	(127136894)	+	L2b	LINE/L2	3183	3229	(158)	788087
2295	9.0	0.3	2.0	chr12	6138416	6138715	(127136594)	C	AluY	SINE/Alu	(16)	295	1	788088
1749	16.5	0.3	1.4	chr12	6279036	6279332	(126995977)	C	AluJb	SINE/Alu	(15)	297	4	788383
12	30.5	1.6	3.1	chr12	8243119	8243182	(125032127)	+	G-rich	Low_complexity	1	65	(0)	791978
1056	30.5	10.5	4.0	chr12	8327060	8327265	(124948044)	+	L2b	LINE/L2	2261	2467	(952)	792110
13758	6.2	0.4	0.4	chr12	8480147	8482655	(124792654)	C	L1P2	LINE/L1	(3155)	2991	499	792337
656	30.0	0.9	1.7	chr12	8482650	8482880	(124792429)	C	L1M2a	LINE/L1	(5128)	2040	1812	792338
6755	6.4	1.3	0.1	chr12	9608603	9610301	(123665008)	C	L1PA5	LINE/L1	(0)	6154	4435	794094
19560	7.1	1.2	0.1	chr12	9610354	9615106	(123660203)	+	L1P2	LINE/L1	4	4792	(1354)	794095
23507	7.0	1.2	0.2	chr12	9627299	9633386	(123641923)	C	L1PA5	LINE/L1	(11)	6143	4	794112
767	26.1	8.8	2.2	chr12	9726148	9726559	(123548750)	+	L1MEd	LINE/L1	743	1184	(5902)	794227
11563	10.2	0.6	0.0	chr12	10646099	10647668	(122627641)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	795470
12	21.0	5.0	4.8	chr12	10723235	10723294	(122552015)	+	(GCGGCT)n	Simple_repeat	1	63	(0)	795577
9521	16.7	1.2	0.4	chr12	10855285	10856901	(122418408)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	795765
24335	6.3	0.1	0.1	chr12	11377198	11383318	(121891991)	+	L1PA4	LINE/L1	31	6155	(0)	796399
19389	6.8	0.6	0.0	chr12	11416213	11420885	(121854424)	+	L1PA4	LINE/L1	31	4730	(1416)	796446
10174	14.8	2.0	0.2	chr12	12647569	12649171	(120626138)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	798501
22852	7.1	0.8	0.3	chr12	14861687	14867484	(118407825)	C	L1PA6	LINE/L1	(334)	5993	174	802026
359	22.5	15.9	1.0	chr12	15492195	15492387	(117782922)	+	L1MEi	LINE/L1	590	816	(1396)	802877
454	23.0	1.2	6.0	chr12	15492417	15492549	(117782760)	+	FLAM_C	SINE/Alu	7	222	(80)	802879
1036	14.9	0.6	1.2	chr12	15881803	15881963	(117393346)	C	AluJb	SINE/Alu	(14)	298	139	803442
23808	6.6	0.7	0.1	chr12	15943741	15949837	(117325472)	C	L1PA5	LINE/L1	(12)	6142	11	803560
1117	28.3	12.0	2.7	chr12	16759204	16759649	(116515660)	C	MER20B	DNA/hAT-Charlie	(287)	496	4	804675
1596	20.0	1.7	2.4	chr12	16759674	16759968	(116515341)	C	AluJo	SINE/Alu	(19)	293	1	804676
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
237	37.0	2.8	1.4	chr12	17097913	17098052	(116177257)	C	MLT1J-int	LTR/ERVL-MaLR	(876)	511	370	805100
10821	12.7	1.7	0.5	chr12	18102532	18104142	(115171167)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	806219
22962	7.1	0.9	0.4	chr12	21622801	21627711	(111647598)	C	L1PA6	LINE/L1	(1224)	4922	4	811013
1812	17.3	0.6	5.6	chr12	21767296	21767651	(111507658)	+	MER1B	DNA/hAT-Charlie	1	338	(1)	811205
24861	6.4	0.9	0.1	chr12	21899336	21905423	(111369886)	+	L1PA5	LINE/L1	12	6151	(3)	811382
17216	8.0	0.9	0.3	chr12	24623501	24625755	(108649554)	C	L1PA6	LINE/L1	(3911)	2273	5	815165
37	15.3	0.0	0.0	chr12	25250861	25250926	(108024383)	+	(GCC)n	Simple_repeat	1	66	(0)	816204
15846	7.3	1.4	0.3	chr12	25561067	25564267	(107711042)	C	L1PA5	LINE/L1	(2919)	3227	4	816670
8594	16.6	2.7	0.5	chr12	25706555	25708082	(107567227)	+	MSTB-int	LTR/ERVL-MaLR	3	1565	(86)	816859
24021	6.6	0.7	1.3	chr12	27114233	27120439	(106154870)	C	L1PA6	LINE/L1	(7)	6320	174	819034
26314	4.8	0.2	0.0	chr12	27404618	27410753	(105864556)	+	L1PA4	LINE/L1	3	6150	(5)	819508
10152	11.3	3.7	3.7	chr12	28754294	28755873	(104519436)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	821480
16006	7.2	1.3	0.1	chr12	29092376	29094460	(104180849)	+	L1PA6	LINE/L1	1	2109	(4075)	821924
24161	6.9	0.2	0.3	chr12	29848461	29854618	(103420691)	+	L1PA5	LINE/L1	1	6153	(1)	822929
6822	10.7	12.0	7.7	chr12	29887973	29889168	(103386141)	C	LTR12D	LTR/ERV1	(0)	1254	1	822987
314	30.3	7.2	2.1	chr12	29889169	29889303	(103386006)	C	L1ME3F	LINE/L1	(81)	6162	6018	822988
12293	7.0	1.3	0.1	chr12	30365939	30367493	(102907816)	C	L1P2	LINE/L1	(4609)	1575	1	823620
24015	6.7	1.0	1.5	chr12	30889644	30895170	(102380139)	C	L1PA6	LINE/L1	(666)	5488	18	824340
1647	20.4	5.6	7.6	chr12	31682254	31682804	(101592505)	C	LTR55	LTR/ERVL?	(2)	546	8	825803
13	11.2	3.2	3.1	chr12	32679264	32679294	(100596015)	+	GA-rich	Low_complexity	1	32	(0)	827925
16	23.9	0.0	0.0	chr12	32679526	32679569	(100595740)	+	(GCGCCC)n	Simple_repeat	1	44	(0)	827926
11035	9.8	2.7	0.1	chr12	33550565	33552102	(99723207)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	829161
15854	9.5	1.2	0.0	chr12	33928276	33930457	(99344852)	+	L1P1	LINE/L1	1	2209	(3946)	829614
25215	6.2	0.5	0.4	chr12	33930455	33936566	(99338743)	+	L1PA5	LINE/L1	39	6154	(0)	829615
24737	7.3	0.4	0.1	chr12	39207751	39213892	(94061417)	+	L1PA5	LINE/L1	5	6154	(0)	832101
19	27.2	1.2	3.7	chr12	39443387	39443466	(93831843)	+	(CCCCG)n	Simple_repeat	1	81	(0)	832452
11263	10.4	0.9	0.0	chr12	39526257	39527822	(93747487)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	832591
9359	16.9	1.4	1.1	chr12	39878215	39879859	(93395450)	+	MSTA-int	LTR/ERVL-MaLR	1	1651	(0)	833004
25104	5.3	0.2	0.1	chr12	42653613	42659518	(90615791)	C	L1PA4	LINE/L1	(246)	5909	1	837008
9971	11.7	4.6	3.1	chr12	43084438	43085992	(90189317)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	837596
22845	7.0	1.1	0.2	chr12	45391884	45397988	(87877321)	+	L1PA6	LINE/L1	7	6147	(7)	840744
267	10.0	5.7	0.0	chr12	46159408	46159457	(87115852)	C	Charlie18a	DNA/hAT-Charlie	(0)	342	290	841914
406	28.9	1.3	7.3	chr12	46159487	46159650	(87115659)	C	Charlie18a	DNA/hAT-Charlie	(188)	154	1	841914
22188	8.1	0.2	0.1	chr12	46246033	46248874	(87026435)	+	L1PA6	LINE/L1	1	2833	(3313)	842023
6710	21.4	4.0	5.9	chr12	46280961	46283511	(86991798)	+	L1MA4	LINE/L1	757	3179	(4387)	842069
23020	7.7	0.6	0.1	chr12	46283517	46289653	(86985656)	+	L1PA6	LINE/L1	5	6154	(0)	842071
24250	6.6	0.5	0.4	chr12	46307045	46313162	(86962147)	C	L1PA5	LINE/L1	(11)	6143	22	842092
23660	7.3	0.5	0.2	chr12	46539931	46546054	(86729255)	C	L1PA5	LINE/L1	(1)	6326	184	842418
24333	7.3	0.5	0.2	chr12	46736989	46743143	(86532166)	+	L1PA6	LINE/L1	174	6326	(1)	842661
15426	8.0	1.4	0.1	chr12	47453995	47457914	(85817395)	C	L1P2	LINE/L1	(2186)	3960	4	843727
297	28.8	9.6	3.0	chr12	47459350	47459556	(85815753)	+	MLT1K	LTR/ERVL-MaLR	65	266	(344)	843731
38	0.0	0.0	0.0	chr12	47459632	47459664	(85815645)	+	(AC)n	Simple_repeat	1	33	(0)	843732
217	26.3	14.7	2.0	chr12	47717758	47717858	(85557451)	C	L3b	LINE/CR1	(123)	5109	4994	844087
369	33.7	6.4	0.6	chr12	47779257	47779432	(85495877)	+	MIRb	SINE/MIR	60	246	(22)	844189
16820	8.1	1.5	1.4	chr12	48552505	48554329	(84720980)	C	L1PA4	LINE/L1	(4326)	2031	177	845330
2329	7.6	0.0	1.0	chr12	48963285	48963574	(84311735)	C	AluY	SINE/Alu	(24)	287	1	846172
2361	10.5	0.0	0.0	chr12	48963609	48963914	(84311395)	+	AluSq2	SINE/Alu	1	306	(7)	846173
12	20.1	2.9	0.0	chr12	49070012	49070045	(84205264)	+	(GCCGC)n	Simple_repeat	1	35	(0)	846320
90	2.3	0.0	0.0	chr12	49264788	49264876	(84010433)	+	(CCCTTCCTC)n	Simple_repeat	1	89	(0)	846829
10922	12.4	1.6	1.7	chr12	50833272	50834901	(82440408)	+	THE1D-int	LTR/ERVL-MaLR	3	1631	(0)	850099
26683	5.2	0.2	0.1	chr12	50972507	50978654	(82296655)	+	L1PA5	LINE/L1	2	6154	(0)	850344
15	32.3	0.0	1.6	chr12	51083338	51083400	(82191909)	+	(CCG)n	Simple_repeat	1	63	(0)	850560
246	28.5	1.4	7.4	chr12	51415945	51416092	(81859217)	C	L1M5	LINE/L1	(3764)	2451	2313	851309
22	4.0	0.0	0.0	chr12	51416207	51416232	(81859077)	+	(T)n	Simple_repeat	1	26	(0)	851323
21	25.6	1.4	1.4	chr12	54018107	54018177	(79257132)	+	G-rich	Low_complexity	1	72	(0)	855761
24515	6.9	0.4	0.0	chr12	54776770	54782882	(78492427)	+	L1PA5	LINE/L1	11	6148	(6)	856984
24564	6.0	0.1	0.1	chr12	54812573	54818720	(78456589)	C	L1PA4	LINE/L1	(2)	6153	2	857003
1046	6.5	0.0	0.0	chr12	55645987	55646109	(77629200)	C	AluYc	SINE/Alu	(16)	283	161	857987
414	5.7	0.0	0.0	chr12	55646110	55646162	(77629147)	C	L1PREC2	LINE/L1	(867)	5279	5227	857986
20	24.6	6.0	1.1	chr12	56104552	56104639	(77170670)	+	(CTCG)n	Simple_repeat	1	92	(0)	858918
318	13.5	0.0	3.9	chr12	57392208	57392248	(75883061)	+	L1MEc	LINE/L1	1457	1496	(4904)	861194
1910	14.8	10.0	0.0	chr12	57392249	57392553	(75882756)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	861200
318	13.5	0.0	3.9	chr12	57392554	57392588	(75882721)	+	L1MEc	LINE/L1	1497	1530	(4870)	861194
749	11.9	2.7	0.0	chr12	57392590	57392698	(75882611)	C	AluSp	SINE/Alu	(9)	304	193	861201
304	20.5	0.0	0.7	chr12	57392725	57392781	(75882528)	+	FLAM_C	SINE/Alu	2	48	(85)	861202
13	12.5	0.0	0.0	chr12	57633134	57633159	(75642150)	+	(CGCAG)n	Simple_repeat	1	26	(0)	861598
24780	5.2	0.1	0.1	chr12	58226939	58233087	(75042222)	C	L1PA4	LINE/L1	(0)	6155	1	862493
9447	10.5	5.0	3.1	chr12	58276765	58278201	(74997108)	+	THE1B-int	LTR/ERVL-MaLR	2	1466	(114)	862549
13410	7.6	1.4	0.1	chr12	58701331	58703076	(74572233)	+	L1P2	LINE/L1	1	1769	(4415)	863154
10711	13.9	0.6	0.3	chr12	59252227	59253853	(74021456)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	863865
13	17.4	0.0	2.9	chr12	59596063	59596096	(73679213)	+	(CGCCTC)n	Simple_repeat	1	34	(0)	864295
21	0.0	5.9	2.8	chr12	59596251	59596284	(73679025)	+	(GGA)n	Simple_repeat	1	36	(0)	864296
25657	6.3	0.5	0.3	chr12	61316747	61322871	(71952438)	+	L1PA5	LINE/L1	15	6148	(6)	866384
16611	7.1	1.0	0.7	chr12	63165491	63168401	(70106908)	C	L1P2	LINE/L1	(3237)	2909	4	869076
2346	11.5	0.0	0.3	chr12	63175953	63176265	(70099044)	+	AluSx1	SINE/Alu	1	312	(0)	869083
8632	10.9	11.4	5.4	chr12	63176266	63177231	(70098078)	+	THE1C-int	LTR/ERVL-MaLR	497	1580	(0)	869082
26157	5.4	0.3	0.0	chr12	63240422	63246538	(70028771)	+	L1PA4	LINE/L1	22	6155	(0)	869169
490	32.6	3.0	5.2	chr12	63295998	63296379	(69978930)	C	MamGypLTR3a	LTR/Gypsy	(2)	979	607	869232
2124	21.9	9.2	4.3	chr12	63296443	63296886	(69978423)	C	L1MC5	LINE/L1	(15)	9289	8832	869233
16714	6.7	0.3	0.0	chr12	63434167	63436476	(69838833)	+	L1PA4	LINE/L1	10	2327	(3819)	869402
11198	11.7	1.2	1.2	chr12	65483438	65484591	(67790718)	C	MSTA-int	LTR/ERVL-MaLR	(4)	1627	460	872853
24687	7.1	0.2	0.2	chr12	66097662	66100879	(67174430)	C	L1PA5	LINE/L1	(2923)	3223	1	873803
20	22.8	0.0	7.3	chr12	66302344	66302425	(66972884)	+	(CCCCT)n	Simple_repeat	1	82	(0)	874171
223	30.7	4.3	0.0	chr12	66824528	66824615	(66450694)	C	L3	LINE/CR1	(55)	4044	3953	874962
196	26.0	2.0	0.0	chr12	67070118	67070167	(66205142)	+	L3b	LINE/CR1	4875	4925	(307)	875356
3521	5.7	0.0	3.2	chr12	67791554	67792057	(65483252)	C	L1P2	LINE/L1	(4259)	1925	1438	876427
4877	10.2	1.2	0.0	chr12	67792058	67792765	(65482544)	C	L1P2	LINE/L1	(5463)	721	5	876427
11218	11.4	1.8	0.3	chr12	68083164	68084768	(65190541)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	3	876841
257	6.2	0.0	0.0	chr12	69201071	69201102	(64074207)	+	HERVK3-int	LTR/ERVK	147	178	(7024)	878889
651	21.6	8.7	9.6	chr12	69201147	69201366	(64073943)	+	HERVK14-int	LTR/ERVK	15	232	(6970)	878890
5802	17.2	4.1	1.0	chr12	69298110	69299230	(63976079)	+	MSTB-int	LTR/ERVL-MaLR	494	1651	(0)	879030
11092	9.8	1.6	2.9	chr12	72070306	72071906	(61203403)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	883324
5081	18.1	1.2	0.0	chr12	72453005	72453893	(60821416)	+	MSTA-int	LTR/ERVL-MaLR	5	904	(747)	883865
487	18.3	0.0	0.0	chr12	72453900	72453981	(60821328)	C	L1PBa	LINE/L1	(5782)	1081	1000	883866
24977	5.7	0.4	1.3	chr12	72851361	72857571	(60417738)	C	L1PA4	LINE/L1	(0)	6155	4	884298
24835	7.4	0.8	0.5	chr12	73605704	73611829	(59663480)	+	L1PA5	LINE/L1	4	6136	(18)	885172
7354	17.9	0.8	0.4	chr12	73652363	73653618	(59621691)	+	MSTA-int	LTR/ERVL-MaLR	1	1261	(370)	885225
10376	14.5	1.1	2.2	chr12	74599434	74600727	(58674582)	+	THE1D-int	LTR/ERVL-MaLR	1	1277	(354)	886414
22504	7.0	1.2	1.1	chr12	77090430	77096593	(56178716)	C	L1PA6	LINE/L1	(2)	6152	2	890355
413	34.1	6.6	4.8	chr12	77309055	77309322	(55965987)	+	MamGypLTR3	LTR/Gypsy	432	704	(190)	890671
24550	7.3	0.9	0.2	chr12	77459287	77464442	(55810867)	+	L1PA5	LINE/L1	9	5184	(962)	890866
11415	8.0	0.1	0.0	chr12	78608486	78609976	(54665333)	+	L1P1	LINE/L1	4	1495	(4660)	892355
10426	12.5	2.9	0.3	chr12	79837932	79839468	(53435841)	+	THE1C-int	LTR/ERVL-MaLR	1	1578	(2)	894108
26123	5.1	0.1	0.1	chr12	80123036	80129186	(53146123)	C	L1PA4	LINE/L1	(0)	6155	3	894577
22360	7.9	1.7	0.3	chr12	81056343	81062394	(52212915)	C	L1PA6	LINE/L1	(2)	6152	3	895916
10842	9.3	0.6	0.0	chr12	83555261	83556685	(49718624)	C	L1P2	LINE/L1	(4748)	1436	3	899235
25509	6.4	0.4	0.1	chr12	85785426	85791541	(47483768)	+	L1PA5	LINE/L1	4	6141	(13)	902127
357	10.5	0.0	0.0	chr12	86120226	86120282	(47155027)	C	L1PA6	LINE/L1	(1)	6153	6097	902525
11849	5.7	1.9	0.1	chr12	86120286	86121800	(47153509)	+	L1P2	LINE/L1	515	2056	(4128)	902526
24337	7.4	0.2	0.4	chr12	86626746	86632913	(46642396)	+	L1PA6	LINE/L1	1	6148	(6)	903209
25641	6.6	0.5	0.0	chr12	87393952	87400055	(45875254)	+	L1PA5	LINE/L1	11	6146	(8)	904173
24663	7.4	1.2	0.2	chr12	87530987	87537086	(45738223)	+	L1PA5	LINE/L1	4	6154	(0)	904359
11818	9.4	0.2	0.1	chr12	88017511	88019088	(45256221)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	904971
11196	10.0	0.9	1.4	chr12	88030456	88032042	(45243267)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	904978
274	17.4	0.0	0.0	chr12	88144713	88144758	(45130551)	C	L2b	LINE/L2	(48)	3327	3282	905129
9689	11.7	6.4	1.4	chr12	89091252	89092361	(44182948)	+	THE1C-int	LTR/ERVL-MaLR	438	1579	(1)	906453
23948	6.4	1.0	0.0	chr12	89440654	89446709	(43828600)	+	L1PA5	LINE/L1	4	6102	(52)	907036
213	7.1	0.0	0.0	chr12	89919930	89919957	(43355352)	+	MER5B	DNA/hAT-Charlie	23	50	(128)	907781
8943	11.7	9.9	1.0	chr12	90208335	90209773	(43065536)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	908198
1112	29.7	4.4	9.2	chr12	92789318	92789519	(40485790)	+	L2a	LINE/L2	2296	2469	(950)	912110
18783	6.3	1.1	0.6	chr12	92789555	92793820	(40481489)	+	L1PA6	LINE/L1	408	4679	(1467)	912112
12380	9.8	0.1	0.1	chr12	94016725	94018355	(39256954)	+	MSTA-int	LTR/ERVL-MaLR	2	1631	(0)	914506
4528	11.6	0.4	0.6	chr12	94063568	94064251	(39211058)	+	L1MA3	LINE/L1	5622	6304	(1)	914604
24232	7.0	1.0	0.3	chr12	94064284	94070400	(39204909)	+	L1PA6	LINE/L1	3	6150	(4)	914605
5946	15.9	5.6	4.6	chr12	94381912	94383289	(38892020)	C	L1MDa	LINE/L1	(2532)	4005	2613	915115
12	16.8	10.6	0.0	chr12	94649867	94649913	(38625396)	+	(CCGCGCT)n	Simple_repeat	1	52	(0)	915565
24613	5.5	0.7	0.2	chr12	95775206	95781318	(37493991)	+	L1PA5	LINE/L1	11	6154	(0)	917867
253	28.3	6.4	15.2	chr12	96906710	96907005	(36368304)	+	L2b	LINE/L2	3139	3396	(30)	919870
22649	7.7	0.4	0.9	chr12	97672580	97675451	(35599858)	+	L1PA6	LINE/L1	174	3020	(3299)	921027
10944	9.0	0.8	6.9	chr12	100079147	100080349	(33194960)	+	THE1B-int	LTR/ERVL-MaLR	1	1196	(384)	924823
306	23.1	10.7	4.1	chr12	102856191	102856312	(30418997)	+	MER5A	DNA/hAT-Charlie	52	182	(7)	929733
25751	5.8	0.6	0.2	chr12	102856331	102861982	(30413327)	+	L1PA5	LINE/L1	484	6154	(0)	929734
23722	7.5	1.1	0.2	chr12	103485169	103490087	(29785222)	C	L1PA6	LINE/L1	(1190)	4956	2	930733
24799	5.8	0.2	0.1	chr12	103608442	103613835	(29661474)	C	L1PA5	LINE/L1	(745)	5401	1	930938
25181	6.6	0.5	0.1	chr12	104034167	104040305	(29235004)	+	L1PA6	LINE/L1	174	6324	(3)	931742
26742	4.9	0.3	0.1	chr12	104388565	104394705	(28880604)	C	L1PA4	LINE/L1	(4)	6151	1	932469
229	27.6	4.8	0.0	chr12	104408754	104408851	(28866458)	C	MIRc	SINE/MIR	(126)	142	40	932506
18	0.0	0.0	0.0	chr12	105084231	105084253	(28191056)	+	(TTTG)n	Simple_repeat	1	23	(0)	933801
11	34.9	1.4	1.4	chr12	105084548	105084617	(28190692)	+	(GCCCGCC)n	Simple_repeat	1	71	(0)	933802
26570	5.1	0.4	0.2	chr12	105513865	105520009	(27755300)	C	L1PA4	LINE/L1	(0)	6155	4	934530
207	27.4	1.9	0.0	chr12	107342952	107343002	(25932307)	+	L2b	LINE/L2	3241	3292	(83)	937916
1852	18.4	0.3	0.0	chr12	107343021	107343313	(25931996)	C	AluJo	SINE/Alu	(18)	294	1	937917
961	27.4	16.0	4.0	chr12	108493971	108494462	(24780847)	+	L2c	LINE/L2	2748	3334	(53)	940415
24	13.3	3.2	4.6	chr12	108857561	108857623	(24417686)	+	G-rich	Low_complexity	1	65	(0)	941123
24	20.1	0.0	4.4	chr12	108857622	108857689	(24417620)	+	(CCCGCC)n	Simple_repeat	1	68	(0)	941124
2620	5.2	0.0	0.3	chr12	108857986	108858292	(24417017)	+	AluSc	SINE/Alu	1	306	(3)	941125
2356	10.4	0.0	1.3	chr12	112640039	112640355	(20634954)	+	AluSq2	SINE/Alu	1	313	(0)	949746
1125	19.3	7.2	3.6	chr12	114499582	114499744	(18775565)	C	L1MB8	LINE/L1	(186)	5992	5830	953829
15	32.4	1.1	3.3	chr12	116819327	116819415	(16455894)	+	(GGCCCGG)n	Simple_repeat	1	90	(0)	959020
24507	6.5	1.1	0.1	chr12	117623233	117629334	(15645975)	C	L1PA6	LINE/L1	(1)	6153	5	960746
25225	6.5	0.4	0.1	chr12	118668583	118674733	(14600576)	C	L1PA6	LINE/L1	(4)	6150	3	963086
2096	11.2	0.4	0.0	chr12	118674738	118675013	(14600296)	C	AluSx	SINE/Alu	(18)	294	18	963087
24948	6.7	0.6	0.1	chr12	119532439	119538554	(13736755)	C	L1PA7	LINE/L1	(18)	6136	1	964999
241	20.8	0.0	0.0	chr12	119667518	119667565	(13607744)	+	MER5A	DNA/hAT-Charlie	137	184	(5)	965293
332	32.0	0.0	0.0	chr12	119667578	119667674	(13607635)	C	L2	LINE/L2	(571)	2848	2752	965294
14	19.2	4.8	0.0	chr12	119667740	119667781	(13607528)	+	(GCCTGG)n	Simple_repeat	1	44	(0)	965295
41466	5.6	0.4	0.8	chr12	123552530	123555874	(9719435)	+	HERV17-int	LTR/ERV1	3284	6615	(2011)	974386
2284	10.4	0.0	0.7	chr12	123555875	123556183	(9719126)	+	AluSx	SINE/Alu	2	308	(4)	974389
36	24.0	2.7	1.8	chr12	125186406	125186516	(8088793)	+	(GGC)n	Simple_repeat	1	114	(0)	977734
23278	6.5	0.9	0.3	chr12	126320656	126326787	(6948522)	C	L1PA6	LINE/L1	(2)	6325	174	979624
16119	6.8	0.2	0.0	chr12	126640588	126642720	(6632589)	C	L1PA6	LINE/L1	(3910)	2274	137	980145
26166	5.7	0.5	0.0	chr12	128491851	128497975	(4777334)	C	L1PA5	LINE/L1	(0)	6154	1	983283
1094	29.1	1.6	0.0	chr12	131583345	131583663	(1691646)	+	Tigger6a	DNA/TcMar-Tigger	2	325	(758)	988300
2268	20.7	6.3	7.7	chr12	131583669	131583794	(1691515)	+	L1MD	LINE/L1	3081	3210	(2936)	988301
13	28.9	0.0	5.7	chr12	131949668	131949737	(1325572)	+	(GCCCC)n	Simple_repeat	1	70	(0)	988881
15	29.0	0.0	0.0	chr12	132300777	132300826	(974483)	+	(AACCC)n	Simple_repeat	1	50	(0)	989306
307	16.7	4.3	0.0	chr12	132300853	132300918	(974391)	C	MSTD	LTR/ERVL-MaLR	(223)	173	105	989305
244	32.7	9.0	1.7	chr12	132301011	132301184	(974125)	C	MIRb	SINE/MIR	(47)	221	34	989307
16	23.9	0.0	8.6	chr12	133037457	133037537	(237772)	+	G-rich	Low_complexity	1	81	(0)	990398
264	22.2	0.0	0.0	chr12	133037947	133037991	(237318)	C	Alu	SINE/Alu	(88)	45	1	990399
400	24.1	4.1	2.1	chr12	133181177	133181320	(93989)	C	L1MEg	LINE/L1	(4318)	1766	1620	990655
1065	19.8	1.1	0.0	chr13	19604929	19605115	(94759213)	C	AluJo	SINE/Alu	(4)	308	120	992693
18043	5.6	1.2	0.3	chr13	20243275	20246065	(94118263)	+	L1P1	LINE/L1	4	2823	(3323)	993956
11172	10.7	1.3	0.0	chr13	22371570	22373128	(91991200)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	997397
26389	5.3	0.5	0.3	chr13	24548424	24554557	(89809771)	C	L1PA4	LINE/L1	(0)	6155	8	1000446
13	5.2	0.0	0.0	chr13	25046989	25047008	(89317320)	+	(AAT)n	Simple_repeat	1	20	(0)	1001211
18	10.5	0.0	0.0	chr13	25047466	25047496	(89316832)	+	(GGGA)n	Simple_repeat	1	31	(0)	1001212
237	28.0	3.9	0.0	chr13	25185627	25185701	(89178627)	C	LTR85a	LTR/Gypsy?	(620)	82	5	1001426
6108	8.8	2.5	1.8	chr13	27125487	27126431	(87237897)	+	L1P2	LINE/L1	5	956	(5228)	1004359
247	28.1	8.3	1.6	chr13	27322222	27322344	(87041984)	C	L2c	LINE/L2	(2)	3385	3254	1004725
36	4.5	2.2	0.0	chr13	27920071	27920116	(86444212)	+	(CCCGGCT)n	Simple_repeat	1	47	(0)	1005748
426	31.7	11.0	1.6	chr13	28658712	28658900	(85705428)	+	MIRc	SINE/MIR	58	266	(2)	1007119
226	31.7	0.0	1.0	chr13	29943632	29943733	(84420595)	+	L1ME4a	LINE/L1	6024	6124	(0)	1008863
286	33.5	10.9	1.4	chr13	31328010	31328224	(83036104)	+	MIRc	SINE/MIR	2	239	(29)	1011156
25881	6.0	1.8	0.5	chr13	31340592	31346520	(83017808)	+	L1PA4	LINE/L1	1	6155	(0)	1011172
16238	6.7	0.2	0.1	chr13	31578664	31584627	(82779701)	C	L1PA5	LINE/L1	(2)	6152	11	1011529
25167	6.3	1.5	0.2	chr13	32602093	32608174	(81756154)	C	L1PA5	LINE/L1	(0)	6154	6	1013084
22658	7.2	0.5	0.1	chr13	33417970	33424106	(80940222)	+	L1PA6	LINE/L1	6	6154	(0)	1014274
828	27.3	7.8	1.2	chr13	33818362	33818761	(80545567)	C	L2a	LINE/L2	(176)	3250	2806	1014882
9462	11.8	5.5	1.2	chr13	34087476	34088918	(80275410)	+	THE1D-int	LTR/ERVL-MaLR	67	1574	(6)	1015287
23336	8.9	2.5	0.7	chr13	34983036	34988635	(79375693)	C	L1PA6	LINE/L1	(14)	6140	438	1016597
309	5.3	0.0	0.0	chr13	34988636	34988673	(79375655)	C	L1PA6	LINE/L1	(6141)	43	6	1016597
2146	23.3	10.1	5.3	chr13	34988670	34989277	(79375051)	C	L1MEf	LINE/L1	(3723)	2423	1785	1016594
24194	6.8	0.5	0.1	chr13	36468310	36474434	(77889894)	C	L1PA5	LINE/L1	(4)	6150	1	1018583
483	38.7	6.6	2.2	chr13	38437139	38437545	(75926783)	C	L2c	LINE/L2	(51)	3336	2911	1021241
2284	9.7	0.7	1.0	chr13	38601992	38602301	(75762027)	C	AluSx	SINE/Alu	(3)	309	1	1021464
10622	9.7	6.6	0.9	chr13	39295790	39297326	(75067002)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	1022434
9379	15.4	1.8	1.1	chr13	39437931	39439542	(74924786)	+	MSTA-int	LTR/ERVL-MaLR	2	1625	(6)	1022627
23985	6.4	0.8	0.2	chr13	39848276	39854404	(74509924)	C	L1PA5	LINE/L1	(3)	6151	4	1023231
15	18.3	0.0	2.6	chr13	40789604	40789642	(73574686)	+	(GAGCCG)n	Simple_repeat	1	39	(0)	1024731
25099	6.4	0.7	0.1	chr13	41042309	41048414	(73315914)	C	L1PA5	LINE/L1	(0)	6154	11	1025145
1602	20.1	2.1	0.0	chr13	41048429	41048712	(73315616)	C	AluJb	SINE/Alu	(22)	290	1	1025146
3841	13.3	2.2	13.5	chr13	41148180	41148942	(73215386)	+	LTR76	LTR/ERV1	1	675	(0)	1025343
1137	17.6	0.0	5.8	chr13	41148943	41149024	(73215304)	+	AluJo	SINE/Alu	214	294	(18)	1025342
749	18.6	1.3	6.6	chr13	41149030	41149196	(73215132)	C	L1MD	LINE/L1	(2037)	4109	3952	1025337
9180	12.4	1.4	2.6	chr13	42446070	42447556	(71916772)	+	THE1C-int	LTR/ERVL-MaLR	4	1471	(160)	1027385
11919	9.0	1.1	0.3	chr13	45565804	45567371	(68796957)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	1032515
22563	6.8	1.2	0.3	chr13	47734792	47740890	(66623438)	+	L1PA6	LINE/L1	6	6148	(6)	1035693
12441	10.0	0.2	0.1	chr13	47790300	47791876	(66572452)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	1035750
2628	7.0	0.3	1.3	chr13	48095346	48095659	(66268669)	C	AluY	SINE/Alu	(0)	311	1	1036247
16719	7.1	0.4	0.0	chr13	48336105	48339809	(66024519)	C	L1P1	LINE/L1	(2414)	3732	13	1036687
20497	7.4	1.6	0.5	chr13	48696536	48701520	(65662808)	+	L1PA5	LINE/L1	4	5028	(1118)	1037218
2213	15.5	6.6	7.0	chr13	49829878	49830335	(64533993)	C	MER31B	LTR/ERV1	(8)	458	3	1039129
24977	4.8	0.4	0.1	chr13	50503045	50509169	(63855159)	C	L1PA4	LINE/L1	(3)	6152	13	1040235
2610	11.7	20.7	3.6	chr13	50730846	50731367	(63632961)	+	MER51A	LTR/ERV1	1	634	(0)	1040566
29	3.2	0.0	0.0	chr13	51451721	51451752	(62912576)	+	(CGC)n	Simple_repeat	1	32	(0)	1041597
25	31.9	0.0	6.5	chr13	51451818	51451970	(62912358)	+	G-rich	Low_complexity	1	153	(0)	1041598
26616	6.0	0.3	0.3	chr13	51567036	51571648	(62792680)	+	L1PA4	LINE/L1	11	4631	(1515)	1041790
1217	15.8	0.0	0.0	chr13	51613052	51613228	(62751100)	+	FAM	SINE/Alu	1	177	(8)	1041866
20203	5.6	0.6	0.2	chr13	51649753	51654549	(62709779)	C	L1PA4	LINE/L1	(1328)	4818	3	1041933
295	25.3	9.6	4.5	chr13	52026105	52026282	(62338046)	C	L2c	LINE/L2	(155)	3232	3045	1042447
7326	13.3	0.4	0.6	chr13	54032747	54033841	(60330487)	C	THE1C-int	LTR/ERVL-MaLR	(6)	1574	482	1045432
14	14.9	0.0	7.0	chr13	54161655	54161668	(60202660)	+	A-rich	Low_complexity	1	12	(0)	1045576
2453	10.6	0.0	0.0	chr13	54161669	54162008	(60202320)	+	AluSq2	SINE/Alu	2	313	(0)	1045577
7431	9.0	0.1	0.0	chr13	54917134	54918087	(59446241)	+	L1PA6	LINE/L1	1	955	(5229)	1046505
7246	24.5	7.0	3.5	chr13	55244312	55246995	(59117333)	+	L1MA4	LINE/L1	15	3480	(4085)	1046926
23533	7.2	0.3	1.3	chr13	56628702	56634933	(57729395)	+	L1PA6	LINE/L1	174	6327	(0)	1048595
310	32.1	14.8	0.9	chr13	59338719	59338938	(55025390)	C	MIRb	SINE/MIR	(10)	258	3	1051943
249	22.9	23.4	4.5	chr13	59339010	59339187	(55025141)	+	L2b	LINE/L2	3199	3420	(6)	1051944
208	31.4	5.4	0.0	chr13	59339227	59339296	(55025032)	C	MIRc	SINE/MIR	(193)	75	2	1051945
5495	10.5	0.4	0.3	chr13	61266667	61267420	(53096908)	+	L1P2	LINE/L1	1996	2723	(5456)	1054584
23515	7.3	0.4	0.1	chr13	61267389	61272579	(53091749)	+	L1PA6	LINE/L1	966	6151	(3)	1054585
1889	21.2	1.2	6.7	chr13	61764778	61765227	(52599101)	+	MSTB	LTR/ERVL-MaLR	2	426	(0)	1055164
6961	17.9	8.6	7.7	chr13	61765292	61767029	(52597299)	C	MER52A	LTR/ERV1	(0)	1755	1	1055165
395	25.9	0.9	4.4	chr13	61875027	61875105	(52489223)	+	LTR16	LTR/ERVL	225	304	(134)	1055302
4402	8.9	2.4	3.9	chr13	61875106	61875791	(52488537)	C	LTR76	LTR/ERV1	(0)	675	1	1055303
581	25.1	21.7	6.3	chr13	61893320	61893591	(52470737)	+	MSTD	LTR/ERVL-MaLR	1	340	(56)	1055332
1888	12.1	0.0	0.0	chr13	61893592	61893839	(52470489)	C	AluSc5	SINE/Alu	(28)	281	34	1055333
4905	7.7	2.3	2.3	chr13	61972016	61972703	(52391625)	C	LTR12_	LTR/ERV1	(0)	688	1	1055431
472	28.4	9.9	3.4	chr13	62003794	62004114	(52360214)	+	L1M4	LINE/L1	2200	2543	(4197)	1055473
1832	15.6	2.4	7.7	chr13	62080378	62080683	(52283645)	+	THE1D	LTR/ERVL-MaLR	1	309	(72)	1055568
61	0.0	0.0	0.0	chr13	62080684	62080735	(52283593)	+	(TA)n	Simple_repeat	1	52	(0)	1055569
8041	19.6	3.2	3.5	chr13	62618864	62621712	(51742616)	+	L1MA4A	LINE/L1	1810	4653	(2909)	1056232
17595	6.6	0.8	0.0	chr13	62728035	62730344	(51633984)	C	L1PA6	LINE/L1	(3824)	2322	5	1056349
9346	16.1	3.5	0.8	chr13	63009431	63011011	(51353317)	C	MSTA-int	LTR/ERVL-MaLR	(6)	1625	1	1056706
9447	17.5	1.0	0.7	chr13	63099832	63101452	(51262876)	+	MSTA-int	LTR/ERVL-MaLR	2	1626	(5)	1056828
7280	25.9	5.7	4.6	chr13	63138832	63140208	(51224120)	+	L1MB7	LINE/L1	23	1444	(6073)	1056874
5138	19.7	0.4	0.4	chr13	63270146	63271072	(51093256)	C	MSTA-int	LTR/ERVL-MaLR	(724)	927	1	1057040
1122	26.9	1.3	4.4	chr13	63465292	63465765	(50898563)	+	L1M3a	LINE/L1	2046	2525	(4573)	1057312
873	14.1	0.0	0.0	chr13	63465778	63465905	(50898423)	+	AluSx3	SINE/Alu	168	295	(16)	1057315
1337	28.6	10.7	4.4	chr13	63465913	63466306	(50898022)	+	L1M4c	LINE/L1	1335	1734	(4650)	1057316
1838	17.5	0.0	0.3	chr13	63477117	63477401	(50886927)	+	AluJb	SINE/Alu	16	299	(13)	1057334
278	30.1	12.8	1.3	chr13	63477403	63477560	(50886768)	C	LTR16A2	LTR/ERVL	(11)	484	306	1057335
2296	7.8	0.0	6.3	chr13	63477597	63477927	(50886401)	C	AluY	SINE/Alu	(0)	311	2	1057336
388	19.1	6.7	0.0	chr13	63477937	63478020	(50886308)	C	MSTC	LTR/ERVL-MaLR	(338)	90	1	1057337
10859	10.6	2.3	0.0	chr13	63579763	63581305	(50783023)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	1057470
442	31.4	10.0	3.1	chr13	63609711	63609904	(50754424)	+	MLT1I	LTR/ERVL-MaLR	71	279	(132)	1057501
2142	24.0	5.5	4.8	chr13	63813815	63814762	(50549566)	C	LTR2752	LTR/ERV1	(0)	1077	2	1057761
425	16.1	1.2	1.7	chr13	63935644	63935739	(50428589)	C	L1P3b	LINE/L1	(2989)	3472	3375	1057913
1234	15.2	0.0	0.0	chr13	63935721	63935911	(50428417)	C	L1P3b	LINE/L1	(5095)	780	590	1057913
3967	9.0	1.0	0.1	chr13	63935909	63936839	(50427489)	C	L1PA8A	LINE/L1	(343)	5788	4848	1057915
951	22.8	9.0	3.5	chr13	63943129	63943474	(50420854)	+	MER39	LTR/ERV1	340	706	(1)	1057920
15223	10.0	2.8	1.1	chr13	64119798	64121618	(50242710)	C	L1PA5	LINE/L1	(4320)	1864	4	1058147
15000	19.2	4.3	0.8	chr13	64130162	64133304	(50231024)	+	L1MA2	LINE/L1	16	2848	(4717)	1058161
2157	27.0	14.3	2.1	chr13	64190154	64191280	(50173048)	+	L1MC5	LINE/L1	7812	9086	(218)	1058223
1565	16.3	7.1	1.0	chr13	64191281	64191569	(50172759)	+	AluJr	SINE/Alu	2	309	(3)	1058229
24183	7.4	1.3	0.5	chr13	64211032	64217178	(50147150)	C	L1PA5	LINE/L1	(0)	6154	4	1058248
2768	17.7	14.2	7.5	chr13	64879796	64880504	(49483824)	C	LTR1	LTR/ERV1	(18)	765	1	1059088
4900	25.3	5.9	10.6	chr13	65352615	65354485	(49009843)	+	L1M3e	LINE/L1	596	2384	(5105)	1059698
10996	10.4	0.4	3.3	chr13	65387234	65388861	(48975467)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	1059742
1120	23.4	7.7	7.4	chr13	65613050	65613413	(48750915)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	1060026
3089	22.1	3.6	7.5	chr13	65613414	65613463	(48750865)	C	L1MB8	LINE/L1	(2713)	3433	3383	1060022
2108	12.5	3.7	6.1	chr13	65613464	65613854	(48750474)	+	THE1D	LTR/ERVL-MaLR	1	381	(0)	1060027
20307	9.1	0.8	0.5	chr13	65670906	65675955	(48688373)	C	L1P2	LINE/L1	(1090)	5056	8	1060097
10300	12.3	2.0	0.1	chr13	65755617	65757166	(48607162)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	1060179
11452	10.0	0.4	0.2	chr13	65977036	65978612	(48385716)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	1060467
10895	12.9	0.5	3.5	chr13	66233466	66235146	(48129182)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	1060782
7324	13.3	2.5	0.4	chr13	66684990	66686106	(47678222)	+	THE1C-int	LTR/ERVL-MaLR	491	1631	(0)	1061331
260	33.8	7.9	3.8	chr13	67200344	67200500	(47163828)	C	MamRep605	LTR?	(43)	806	643	1061984
17336	7.9	0.3	1.0	chr13	67452275	67456207	(46908121)	+	L1PA6	LINE/L1	1	3885	(2261)	1062302
23226	8.0	1.0	0.5	chr13	67588344	67594470	(46769858)	+	L1PA6	LINE/L1	1	6145	(9)	1062459
2382	19.8	5.1	0.2	chr13	67857692	67858191	(46506137)	+	L1PBa	LINE/L1	689	1214	(5649)	1062804
577	33.4	8.2	3.7	chr13	67858276	67858763	(46505565)	+	L1MEg	LINE/L1	95	606	(5478)	1062805
2507	16.9	14.3	4.2	chr13	68056803	68057351	(46306977)	C	LTR18B	LTR/ERVL	(0)	614	1	1063046
190	29.7	6.3	6.3	chr13	68057352	68057430	(46306898)	C	L2a	LINE/L2	(12)	3414	3336	1063047
487	16.2	5.9	2.7	chr13	68272514	68272692	(46091636)	+	LTR49-int	LTR/ERV1	992	1155	(7889)	1063324
1287	21.1	1.4	0.0	chr13	68272693	68272971	(46091357)	C	LTR28C	LTR/ERV1	(0)	1129	847	1063327
9213	13.4	3.4	5.0	chr13	68405390	68406767	(45957561)	C	THE1C-int	LTR/ERVL-MaLR	(223)	1357	3	1063507
2929	15.0	7.9	0.0	chr13	68816552	68817038	(45547290)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	1064018
1786	27.4	7.2	1.1	chr13	68817039	68817366	(45546962)	C	MLT1E2	LTR/ERVL-MaLR	(241)	386	19	1064017
7773	18.2	2.7	0.3	chr13	68904755	68906142	(45458186)	+	MSTA-int	LTR/ERVL-MaLR	33	1455	(196)	1064118
25049	6.9	0.7	0.1	chr13	69477867	69483990	(44880338)	C	L1PA5	LINE/L1	(3)	6151	4	1064827
22573	8.0	1.4	1.9	chr13	69666832	69672968	(44691360)	+	L1PA6	LINE/L1	5	6149	(5)	1065077
3479	23.1	11.4	5.4	chr13	69769407	69770414	(44593914)	+	LTR27E	LTR/ERV1	1	1077	(0)	1065224
633	31.6	4.9	5.3	chr13	70203162	70203757	(44160571)	+	L1ME3D	LINE/L1	5468	6080	(162)	1065828
1042	25.5	12.0	0.9	chr13	70203758	70204074	(44160254)	+	LTR18A	LTR/ERVL	1	357	(0)	1065829
9020	13.2	9.3	0.5	chr13	70489920	70491403	(43872925)	+	THE1D-int	LTR/ERVL-MaLR	3	1631	(0)	1066203
9318	7.4	0.5	0.1	chr13	71184295	71185509	(43178819)	+	L1P2	LINE/L1	532	1737	(4952)	1067133
1302	11.2	12.1	2.8	chr13	72202908	72203154	(42161174)	+	MER1B	DNA/hAT-Charlie	4	276	(63)	1068485
402	31.8	12.1	4.1	chr13	72203173	72203392	(42160936)	+	MIRb	SINE/MIR	14	253	(15)	1068486
1749	23.5	4.4	5.7	chr13	72289118	72289626	(42074702)	C	MLT1D	LTR/ERVL-MaLR	(3)	502	1	1068593
4611	19.4	1.8	0.3	chr13	72692575	72693422	(41670906)	+	MST-int	LTR/ERVL-MaLR	213	1072	(579)	1069182
289	27.7	10.5	0.8	chr13	74040216	74040335	(40323993)	C	L2a	LINE/L2	(5)	3421	3289	1071406
1291	31.1	10.4	8.1	chr13	74266081	74267125	(40097203)	+	ERVL-E-int	LTR/ERVL	3005	4075	(1592)	1071747
1623	11.3	0.0	0.9	chr13	74329567	74329798	(40034530)	+	MER30	DNA/hAT-Charlie	1	230	(0)	1071825
19	13.9	3.9	3.8	chr13	75482400	75482450	(38881878)	+	(TCCT)n	Simple_repeat	1	53	(0)	1073409
11700	10.2	0.1	0.2	chr13	76067386	76068966	(38295362)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	1074265
11267	11.3	0.9	0.2	chr13	76086294	76087912	(38276416)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	1074283
544	27.4	10.0	2.0	chr13	77306782	77307138	(37057190)	+	L1MEd	LINE/L1	700	1088	(5998)	1075998
25313	6.8	0.7	0.1	chr13	78526072	78532199	(35832129)	+	L1PA5	LINE/L1	4	6154	(0)	1077675
116	10.3	1.1	1.6	chr13	78587083	78587269	(35777059)	+	(AAGA)n	Simple_repeat	1	189	(0)	1077747
24150	6.1	0.2	0.1	chr13	78854911	78861048	(35503280)	C	L1PA4	LINE/L1	(4)	6151	2	1078126
8908	10.1	2.5	0.5	chr13	78865885	78867218	(35497110)	+	L1P2	LINE/L1	4	1364	(4820)	1078135
24826	6.5	0.9	0.4	chr13	79300067	79306064	(35058264)	+	L1PA5	LINE/L1	124	6146	(8)	1078731
18	20.6	1.9	1.9	chr13	79337199	79337250	(35027078)	+	(CCTCGC)n	Simple_repeat	1	53	(0)	1078771
18	10.5	0.0	0.0	chr13	79481622	79481652	(34882676)	+	(TTTGT)n	Simple_repeat	1	31	(0)	1079007
21905	11.7	2.1	1.0	chr13	79607671	79612325	(34752003)	C	L1PB1	LINE/L1	(370)	6497	252	1079188
650	22.3	0.0	0.0	chr13	79612340	79612460	(34751868)	C	MLT1A	LTR/ERVL-MaLR	(76)	298	178	1079190
6225	15.2	1.7	3.4	chr13	79612457	79613508	(34750820)	C	THE1B-int	LTR/ERVL-MaLR	(595)	1036	3	1079191
23750	7.4	0.3	0.9	chr13	79887035	79893236	(34471092)	+	L1PA6	LINE/L1	5	6149	(5)	1079533
6497	16.7	1.7	1.5	chr13	80423868	80424970	(33939358)	C	MSTA-int	LTR/ERVL-MaLR	(525)	1106	2	1080325
23937	7.1	0.9	0.2	chr13	80516862	80522982	(33841346)	+	L1PA6	LINE/L1	1	6146	(8)	1080433
419	36.0	9.9	9.0	chr13	80707169	80707819	(33656509)	C	L1MDa	LINE/L1	(5663)	970	399	1080630
4801	12.1	4.9	0.0	chr13	80707861	80708582	(33655746)	C	L1P1	LINE/L1	(5385)	770	12	1080631
10372	12.2	1.8	2.6	chr13	81193696	81195288	(33169040)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	1081254
9424	11.9	6.6	2.9	chr13	82676571	82678090	(31686238)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	1083071
10043	15.3	0.9	1.5	chr13	83088370	83090010	(31274318)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	1083569
10804	9.9	1.0	1.3	chr13	83342146	83343720	(31020608)	+	THE1B-int	LTR/ERVL-MaLR	2	1573	(7)	1083867
10000	11.6	0.2	0.1	chr13	83642204	83643596	(30720732)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	186	1084225
7584	27.0	3.7	5.6	chr13	84383596	84386132	(29978196)	+	L1MA4	LINE/L1	3	2487	(4362)	1085172
5542	11.7	16.8	5.3	chr13	85362955	85364056	(29000272)	+	LTR12D	LTR/ERV1	1	1254	(0)	1086446
3093	14.1	1.2	0.4	chr13	87009604	87010094	(27354234)	+	LOR1a	LTR/ERV1	1	495	(2)	1088435
1546	20.3	1.8	0.3	chr13	87010097	87010378	(27353950)	+	LOR1-int	LTR/ERV1	4	289	(7831)	1088435
683	32.5	8.7	2.3	chr13	87124037	87124421	(27239907)	C	MamRTE1	LINE/RTE-BovB	(100)	3712	3301	1088601
3191	12.6	0.4	1.9	chr13	87154529	87155005	(27209323)	C	MER1A	DNA/hAT-Charlie	(0)	529	60	1088644
12	20.5	4.8	6.1	chr13	87155087	87155149	(27209179)	+	(TTAAT)n	Simple_repeat	1	66	(0)	1088645
12	19.4	1.9	7.3	chr13	87810285	87810338	(26553990)	+	(TTATTA)n	Simple_repeat	1	55	(0)	1089498
439	24.0	1.6	6.7	chr13	87810379	87810512	(26553816)	C	HUERS-P2-int	LTR/ERV1	(2961)	127	1	1089499
4769	13.2	1.9	2.4	chr13	87810513	87811351	(26552977)	C	LTR1A2	LTR/ERV1	(0)	837	3	1089499
987	20.5	0.0	0.0	chr13	87985501	87985661	(26378667)	C	MER1B	DNA/hAT-Charlie	(178)	161	1	1089754
1308	11.8	5.6	5.9	chr13	87985681	87985950	(26378378)	+	MER4-int	LTR/ERV1	1688	1956	(4642)	1089749
5671	17.7	3.3	1.0	chr13	87998172	87999153	(26365175)	+	MSTA-int	LTR/ERVL-MaLR	627	1631	(0)	1089764
8716	18.3	1.5	2.3	chr13	88303571	88305215	(26059113)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	1090142
9913	16.0	2.3	0.4	chr13	90026907	90028504	(24335824)	+	THE1C-int	LTR/ERVL-MaLR	3	1631	(0)	1092416
12	17.3	0.0	5.6	chr13	91348161	91348196	(23016132)	+	GA-rich	Low_complexity	1	36	(0)	1094134
24529	4.8	0.9	0.1	chr13	91433202	91438993	(22925335)	C	L1PA4	LINE/L1	(0)	6155	317	1094249
705	5.5	0.0	0.0	chr13	91438995	91439085	(22925243)	C	L1PA4	LINE/L1	(6057)	98	8	1094249
25175	6.6	1.2	0.2	chr13	92516733	92522773	(21841555)	+	L1PA5	LINE/L1	39	6147	(7)	1095679
5354	21.8	4.2	0.3	chr13	92580941	92583359	(21780969)	C	L1MA8	LINE/L1	(4)	6287	3778	1095760
9284	20.6	6.1	1.4	chr13	92758762	92758994	(21605334)	C	L1M2a	LINE/L1	(1025)	6534	6287	1095981
26	0.0	0.0	0.0	chr13	92758995	92759019	(21605309)	+	(T)n	Simple_repeat	1	25	(0)	1095982
9284	20.6	6.1	1.4	chr13	92759020	92761152	(21603176)	C	L1M2a	LINE/L1	(1273)	6286	4050	1095981
15	0.0	4.5	0.0	chr13	94545239	94545250	(19819078)	+	(AT)n	Simple_repeat	1	13	(0)	1098488
2351	18.8	8.3	1.2	chr13	94545251	94545761	(19818567)	+	MER89	LTR/ERV1	5	555	(4)	1098489
2046	18.6	8.2	0.0	chr13	97023051	97023503	(17340825)	+	MLT1D	LTR/ERVL-MaLR	1	673	(7)	1102389
7516	9.0	0.5	0.5	chr13	97601873	97602890	(16761438)	+	L1PA6	LINE/L1	4	1021	(5163)	1103238
29	0.0	0.0	0.0	chr13	99686513	99686537	(14677791)	+	(AG)n	Simple_repeat	1	25	(0)	1106668
1363	22.2	6.3	3.9	chr13	99820879	99821262	(14543066)	+	MERX	DNA/TcMar-Tigger	362	755	(1)	1106896
262	31.9	2.2	0.0	chr13	99821264	99821368	(14542960)	+	L2c	LINE/L2	3238	3346	(41)	1106897
256	29.4	7.8	6.3	chr13	100392906	100393032	(13971296)	C	MIRc	SINE/MIR	(135)	133	2	1107893
10350	11.2	3.1	4.2	chr13	100568627	100570225	(13794103)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	1108154
25262	6.1	1.3	0.1	chr13	105884456	105890515	(8473813)	C	L1PA5	LINE/L1	(5)	6149	11	1115324
9288	16.8	2.4	1.0	chr13	106322126	106323753	(8040575)	+	MSTA-int	LTR/ERVL-MaLR	1	1651	(0)	1115929
11869	9.0	0.5	0.0	chr13	108782017	108783589	(5580739)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	1119241
12	21.1	2.5	2.4	chr13	110616085	110616124	(3748204)	+	(TGCTC)n	Simple_repeat	1	41	(0)	1121516
13	20.1	0.0	2.8	chr13	110616210	110616245	(3748083)	+	(GGCG)n	Simple_repeat	1	36	(0)	1121517
10565	11.6	3.2	0.7	chr13	110742988	110744527	(3619801)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	1121681
9566	11.1	1.2	1.4	chr13	110781455	110783088	(3581240)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1631	1	1121742
16732	8.6	0.0	0.0	chr13	111500015	111502272	(2862056)	C	L1P1	LINE/L1	(3896)	2259	1	1122596
12	24.3	0.0	4.3	chr13	114234973	114235019	(129309)	+	G-rich	Low_complexity	1	47	(0)	1125385
26432	5.5	0.7	0.5	chr14	20860124	20866268	(86177450)	+	L1PA5	LINE/L1	4	6150	(4)	1128720
1376	21.4	1.0	0.3	chr14	21187649	21187938	(85855780)	+	L1M5	LINE/L1	3550	3841	(2305)	1129241
181	29.8	0.0	0.0	chr14	21188024	21188080	(85855638)	C	MIR	SINE/MIR	(128)	134	78	1129245
9996	2.4	7.2	0.5	chr14	21188259	21189482	(85854236)	+	SVA_D	Retroposon/SVA	71	1383	(3)	1129246
21	16.1	0.0	0.0	chr14	21384077	21384117	(85659601)	+	(T)n	Simple_repeat	1	41	(0)	1129660
25603	7.0	1.1	0.1	chr14	22672052	22678155	(84365563)	C	L1PA5	LINE/L1	(0)	6154	4	1131513
418	33.2	5.6	2.7	chr14	23237511	23237770	(83805948)	C	L1M8	LINE/L1	(1388)	967	700	1132522
13	9.4	5.3	5.0	chr14	23237835	23237872	(83805846)	+	(GCCAC)n	Simple_repeat	1	40	(0)	1132525
236	22.4	15.8	0.9	chr14	23401958	23402065	(83641653)	C	MIRc	SINE/MIR	(18)	250	124	1132816
17200	8.6	0.9	0.8	chr14	23689652	23690689	(83353029)	C	L1P2	LINE/L1	(5158)	1199	175	1133221
17543	6.8	0.3	0.0	chr14	24584760	24587834	(82455884)	C	L1PA4	LINE/L1	(3062)	3084	1	1134421
16877	7.0	0.4	0.1	chr14	25367220	25370680	(81673038)	C	L1PA5	LINE/L1	(2672)	3474	2	1135439
9827	11.0	0.1	0.3	chr14	29413757	29415137	(77628581)	+	L1P1	LINE/L1	15	1392	(4763)	1140449
24922	7.2	0.2	0.0	chr14	29775165	29781301	(77262417)	+	L1PA5	LINE/L1	5	6154	(0)	1140976
24860	7.0	0.9	0.3	chr14	29955379	29961497	(77082221)	C	L1PA5	LINE/L1	(4)	6150	4	1141201
11442	9.4	0.2	4.2	chr14	30071995	30073641	(76970077)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	1141349
11027	9.3	1.8	0.1	chr14	30106962	30108473	(76935245)	+	L1P2	LINE/L1	4	1542	(4642)	1141366
799	25.8	3.7	0.5	chr14	32400904	32401113	(74642605)	+	MLT1L	LTR/ERVL-MaLR	160	376	(234)	1145104
23888	6.5	1.0	0.2	chr14	32517314	32523327	(74520391)	+	L1PA5	LINE/L1	2	6141	(13)	1145255
393	34.1	0.0	1.7	chr14	32590987	32591165	(74452553)	+	UCON28a	Unknown	420	595	(212)	1145368
25012	7.2	1.2	0.0	chr14	33088062	33094126	(73949592)	+	L1PA5	LINE/L1	184	6323	(4)	1145978
5085	10.1	4.0	4.5	chr14	34797696	34798554	(72245164)	+	L1P2	LINE/L1	1	854	(5330)	1148645
7706	9.2	1.1	0.2	chr14	35033780	35034802	(72008916)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	549	1149213
1915	9.8	0.4	0.4	chr14	35034803	35035048	(72008670)	C	AluSp	SINE/Alu	(18)	295	50	1149214
26	0.0	0.0	0.0	chr14	35046224	35046248	(71997470)	+	(CCCGC)n	Simple_repeat	1	25	(0)	1149235
12	7.2	10.3	0.0	chr14	35046379	35046407	(71997311)	+	(GGCGCG)n	Simple_repeat	1	32	(0)	1149236
13	8.5	0.0	3.7	chr14	35826847	35826873	(71216845)	+	(CGGGG)n	Simple_repeat	1	27	(0)	1150696
16445	8.5	1.1	0.0	chr14	36122188	36124553	(70919165)	C	L1PA5	LINE/L1	(3752)	2394	1	1151185
11635	9.9	0.1	0.3	chr14	38477195	38478777	(68564941)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	1154294
25430	6.2	0.4	0.4	chr14	38921685	38927831	(68115887)	+	L1PA5	LINE/L1	1	6149	(5)	1154808
11240	8.3	2.2	2.2	chr14	39140955	39142148	(67901570)	C	THE1A-int	LTR/ERVL-MaLR	(5)	1575	365	1155210
9056	12.2	4.4	4.0	chr14	40736598	40738054	(66305664)	+	THE1C-int	LTR/ERVL-MaLR	1	1464	(116)	1157208
28	23.1	0.0	3.7	chr14	44897468	44897548	(62146170)	+	(GGC)n	Simple_repeat	1	81	(0)	1162310
5449	10.5	0.5	0.4	chr14	45795780	45796595	(61247123)	+	L1P1	LINE/L1	16	832	(5323)	1163572
2905	29.1	3.7	2.2	chr14	46047582	46048588	(60995130)	C	L1M1	LINE/L1	(4902)	2663	1641	1163828
1020	30.6	2.3	8.0	chr14	46048693	46049192	(60994526)	C	L1M1	LINE/L1	(6550)	939	469	1163828
24417	7.2	1.0	0.1	chr14	47377248	47383356	(59660362)	+	L1PA5	LINE/L1	5	6152	(2)	1165517
24783	7.4	0.3	0.1	chr14	48570231	48576385	(58467333)	C	L1PA6	LINE/L1	(0)	6154	4	1166887
10768	13.2	0.5	2.5	chr14	48775653	48777317	(58266401)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	1167130
22808	7.2	0.5	0.1	chr14	49356595	49362741	(57680977)	+	L1PA6	LINE/L1	1	6153	(1)	1167818
11510	8.2	0.2	0.2	chr14	50536458	50538033	(56505685)	+	THE1B-int	LTR/ERVL-MaLR	6	1580	(0)	1170131
23687	6.2	0.4	0.1	chr14	51413174	51419310	(55624408)	C	L1PA6	LINE/L1	(15)	6139	8	1171441
6189	10.0	0.2	0.4	chr14	52136141	52136983	(54906735)	+	L1PA5	LINE/L1	1	842	(5313)	1172512
24256	6.0	0.5	0.1	chr14	52208175	52214292	(54829426)	+	L1PA5	LINE/L1	11	6154	(0)	1172596
23774	7.2	0.8	0.1	chr14	52590835	52596957	(54446761)	C	L1PA6	LINE/L1	(2)	6152	5	1173164
23373	7.5	0.5	1.3	chr14	53084652	53090883	(53952835)	+	L1PA6	LINE/L1	174	6326	(1)	1174035
12	16.9	2.9	2.8	chr14	53153332	53153366	(53890352)	+	(CCCCG)n	Simple_repeat	1	36	(0)	1174114
24673	5.0	0.2	0.5	chr14	53318041	53324215	(53719503)	+	L1PA4	LINE/L1	1	6154	(1)	1174362
22822	7.2	1.0	0.1	chr14	53423804	53429913	(53613805)	+	L1PA6	LINE/L1	178	6325	(2)	1174510
11709	9.7	1.6	0.0	chr14	53985142	53986695	(53057023)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	1175305
20	16.2	5.3	1.7	chr14	54509883	54509939	(52533779)	+	(GGCTG)n	Simple_repeat	1	60	(0)	1176039
25990	5.0	0.7	0.8	chr14	54870365	54876505	(52167213)	+	L1PA4	LINE/L1	1	6155	(0)	1176584
23952	6.3	1.7	0.2	chr14	54948076	54954122	(52089596)	+	L1PA5	LINE/L1	11	6150	(4)	1176758
8124	12.8	2.4	0.5	chr14	55312226	55313513	(51730205)	C	THE1D-int	LTR/ERVL-MaLR	(315)	1316	3	1177470
67	0.0	0.0	0.0	chr14	55484331	55484387	(51559331)	+	(GT)n	Simple_repeat	1	57	(0)	1177779
953	30.8	6.4	5.0	chr14	55484388	55484785	(51558933)	+	LTR78	LTR/ERV1	525	927	(377)	1177778
376	27.1	8.5	5.8	chr14	56125196	56125427	(50918291)	C	L2a	LINE/L2	(42)	3384	3181	1178835
24143	6.8	0.6	0.3	chr14	57100480	57106631	(49937087)	C	L1PA5	LINE/L1	(0)	6154	4	1180263
13	15.1	5.1	2.4	chr14	57268730	57268768	(49774950)	+	(CTCCG)n	Simple_repeat	1	41	(0)	1180525
427	20.5	12.4	0.0	chr14	57269459	57269585	(49774133)	+	MIR	SINE/MIR	53	197	(65)	1180526
448	33.0	2.5	1.2	chr14	58883265	58883506	(48160212)	C	MIR	SINE/MIR	(16)	246	2	1182952
2561	1.1	4.2	0.0	chr14	59113028	59113344	(47930374)	C	AluYb8	SINE/Alu	(0)	318	1	1183275
20733	6.6	0.6	0.3	chr14	59400838	59405729	(47637989)	C	L1P2	LINE/L1	(1102)	5359	465	1183668
24347	6.2	0.2	0.1	chr14	59551491	59557628	(47486090)	+	L1PA5	LINE/L1	9	6154	(0)	1183877
15844	16.7	1.5	1.8	chr14	59686456	59689984	(47353734)	+	L1PA15-16	LINE/L1	3	2858	(3995)	1184028
24635	7.3	0.9	0.1	chr14	60036771	60042877	(47000841)	C	L1PA5	LINE/L1	(6)	6321	177	1184500
25705	7.2	0.8	0.4	chr14	60425500	60427624	(46616094)	C	L1PA4	LINE/L1	(4009)	2146	3	1185009
25690	5.4	0.3	0.2	chr14	61009389	61015470	(46028248)	C	L1PA4	LINE/L1	(6)	6149	61	1185873
25712	6.4	0.7	0.1	chr14	61092272	61098394	(45945324)	C	L1PA5	LINE/L1	(2)	6152	4	1185985
24352	5.1	0.4	0.3	chr14	62199102	62205252	(44838466)	C	L1PA4	LINE/L1	(0)	6155	3	1187637
9986	10.2	1.1	0.0	chr14	62521092	62522476	(44521242)	+	L1PA5	LINE/L1	2	1402	(4753)	1187995
19	10.4	5.1	6.5	chr14	64504805	64504863	(42538855)	+	(CCGCGCG)n	Simple_repeat	1	62	(0)	1191410
432	29.9	10.2	2.6	chr14	64689536	64689841	(42353877)	+	HAL1ME	LINE/L1	1989	2320	(145)	1191769
1648	18.2	0.3	2.7	chr14	64689914	64690201	(42353517)	+	AluJr	SINE/Alu	1	284	(28)	1191770
25403	6.5	0.5	0.0	chr14	65522586	65528687	(41515031)	C	L1PA5	LINE/L1	(13)	6141	11	1193328
24375	5.5	0.1	0.0	chr14	66183737	66189867	(40853851)	C	L1PA5	LINE/L1	(5)	6149	11	1194257
1818	25.9	9.8	5.8	chr14	66230169	66230875	(40812843)	C	HAL1	LINE/L1	(373)	2134	1335	1194309
23864	7.6	0.4	0.4	chr14	67062674	67068092	(39975626)	C	L1P2	LINE/L1	(748)	5571	174	1195394
30	5.5	0.0	0.0	chr14	68548294	68548331	(38495387)	+	(GCCCA)n	Simple_repeat	1	38	(0)	1197866
23062	6.3	0.8	1.6	chr14	69415931	69422143	(37621575)	C	L1PA6	LINE/L1	(11)	6143	1	1199478
2675	4.8	0.0	0.0	chr14	69503409	69503717	(37540001)	+	AluSx1	SINE/Alu	1	309	(3)	1199643
1319	11.6	0.0	0.0	chr14	69503718	69503889	(37539829)	+	AluSx3	SINE/Alu	136	307	(4)	1199644
808	26.8	8.4	1.3	chr14	69503957	69504187	(37539531)	+	MIR	SINE/MIR	12	260	(2)	1199645
396	32.7	8.0	1.2	chr14	70046399	70046589	(36997129)	+	MIR3	SINE/MIR	6	196	(34)	1200593
24582	5.8	0.4	0.2	chr14	70501315	70507441	(36536277)	+	L1PA5	LINE/L1	2	6143	(11)	1201274
11365	10.9	1.5	0.4	chr14	70560918	70562530	(36481188)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	1201335
25960	6.2	0.7	0.2	chr14	70936131	70942258	(36101460)	C	L1PA5	LINE/L1	(0)	6154	4	1202014
23	24.7	0.0	6.5	chr14	73458333	73458424	(33585294)	+	(CGCCCC)n	Simple_repeat	1	92	(0)	1206318
10741	9.8	5.7	0.1	chr14	74701633	74703123	(32340595)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	1208993
289	26.5	5.5	6.4	chr14	74954093	74954201	(32089517)	+	MIR3	SINE/MIR	69	176	(32)	1209461
586	23.6	10.4	5.2	chr14	75128185	75128394	(31915324)	C	MIR	SINE/MIR	(1)	261	40	1209775
2079	12.1	4.4	0.0	chr14	75128438	75128718	(31915000)	+	AluSz6	SINE/Alu	2	295	(17)	1209776
22	22.3	3.9	5.6	chr14	76947454	76947571	(30096147)	+	(TGCCCC)n	Simple_repeat	1	115	(0)	1213267
135	1.6	0.8	0.0	chr14	77269669	77269795	(29773923)	+	(TC)n	Simple_repeat	1	128	(0)	1213918
25	0.0	0.0	0.0	chr14	77269796	77269822	(29773896)	+	(C)n	Simple_repeat	1	27	(0)	1213919
529	28.8	2.5	2.5	chr14	77269823	77269979	(29773739)	C	MIR	SINE/MIR	(43)	219	63	1213920
12	13.9	0.0	0.0	chr14	77616616	77616639	(29427079)	+	(GGC)n	Simple_repeat	1	24	(0)	1214576
10025	11.0	9.4	0.1	chr14	77946937	77948414	(29095304)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	1215328
10681	11.5	2.3	1.0	chr14	80237155	80238015	(26805703)	C	THE1B-int	LTR/ERVL-MaLR	(716)	864	2	1218913
6027	12.0	0.2	0.1	chr14	83582737	83583604	(23460114)	+	THE1A-int	LTR/ERVL-MaLR	1	869	(711)	1223672
10006	11.3	6.1	0.1	chr14	85112096	85113579	(21930139)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	1225747
22815	5.7	0.5	0.1	chr14	87775467	87781576	(19262142)	C	L1PA5	LINE/L1	(6)	6148	11	1229474
15	34.0	1.1	3.2	chr14	88562934	88563026	(18480692)	+	G-rich	Low_complexity	1	94	(0)	1230629
17	8.6	5.1	2.4	chr14	88563467	88563505	(18480213)	+	G-rich	Low_complexity	1	41	(0)	1230630
22	7.2	0.0	0.0	chr14	89381526	89381554	(17662164)	+	(A)n	Simple_repeat	1	29	(0)	1231963
1650	17.5	0.4	0.7	chr14	89381577	89381845	(17661873)	+	AluJo	SINE/Alu	1	268	(44)	1231964
975	28.0	5.8	2.8	chr14	89773560	89773959	(17269759)	+	MLT2F	LTR/ERVL	1	413	(250)	1232705
11724	8.6	1.8	0.1	chr14	90937902	90939453	(16104265)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	1234720
10593	13.2	0.4	0.8	chr14	91438741	91439970	(15603748)	+	MSTA-int	LTR/ERVL-MaLR	410	1631	(0)	1235684
11465	9.3	1.1	0.1	chr14	91806266	91807829	(15235889)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	1236337
16	27.8	0.0	3.1	chr14	93788691	93788754	(13254964)	+	G-rich	Low_complexity	1	64	(0)	1240008
2392	27.5	10.0	4.8	chr14	94341473	94342418	(12701300)	C	L2	LINE/L2	(1501)	1918	893	1240976
408	28.1	0.0	5.2	chr14	94981540	94981693	(12062025)	C	MIR	SINE/MIR	(3)	259	114	1242245
187	19.4	2.7	0.0	chr14	94981779	94981814	(12061904)	C	MIRb	SINE/MIR	(175)	93	57	1242246
218	32.6	2.1	3.1	chr14	94981892	94981989	(12061729)	+	MIRb	SINE/MIR	92	188	(80)	1242247
3612	13.4	9.1	4.8	chr14	95146086	95146813	(11896905)	+	LTR27C	LTR/ERV1	1	762	(5)	1242497
467	27.6	3.7	4.9	chr14	95324222	95324385	(11719333)	+	L2b	LINE/L2	3234	3426	(0)	1242779
337	23.5	5.8	0.9	chr14	95432477	95432593	(11611125)	+	MIR	SINE/MIR	67	183	(79)	1243011
16	24.0	0.0	0.0	chr14	99266469	99266503	(7777215)	+	A-rich	Low_complexity	1	35	(0)	1249747
24	6.8	1.9	7.3	chr14	99270735	99270788	(7772930)	+	(TCCCCC)n	Simple_repeat	1	55	(0)	1249752
31	0.0	0.0	0.0	chr14	99420948	99420976	(7622742)	+	(G)n	Simple_repeat	1	29	(0)	1250017
24608	5.9	0.8	0.6	chr14	101744247	101750388	(5293330)	C	L1PA6	LINE/L1	(11)	6143	1	1253595
435	29.6	15.9	2.8	chr14	101975084	101975301	(5068417)	+	MIR	SINE/MIR	10	255	(13)	1253986
208	22.1	23.6	0.0	chr14	101975428	101975540	(5068178)	C	MIR	SINE/MIR	(35)	227	80	1253987
683	21.0	4.2	0.6	chr14	102178500	102178681	(4865037)	+	MER5A	DNA/hAT-Charlie	1	189	(0)	1254417
750	30.8	1.9	4.5	chr14	102178792	102179056	(4864662)	C	MIRb	SINE/MIR	(8)	260	3	1254418
1302	12.2	19.9	0.0	chr14	103204698	103204854	(3838864)	+	AluJr	SINE/Alu	7	221	(91)	1256365
3864	14.2	1.2	7.8	chr14	103204855	103205577	(3838141)	C	LTR76	LTR/ERV1	(0)	675	1	1256366
10715	10.5	4.9	0.6	chr14	104233550	104235060	(2808658)	+	THE1C-int	LTR/ERVL-MaLR	2	1580	(0)	1258209
812	21.6	2.9	5.7	chr14	105188230	105188376	(1855342)	C	HAL1	LINE/L1	(782)	1725	1587	1259370
2041	13.1	1.7	0.7	chr14	105188377	105188667	(1855051)	+	AluSx3	SINE/Alu	1	294	(17)	1259371
2304	9.8	0.0	2.9	chr14	105301857	105302172	(1741546)	+	AluSq2	SINE/Alu	3	309	(4)	1259494
26339	6.1	0.2	0.1	chr14	105956124	105962267	(1081451)	C	L1PA4	LINE/L1	(6)	6149	1	1260164
2251	6.7	4.8	1.1	chr15	20340242	20344102	(81647087)	+	(AGCCAGCCA)n	Simple_repeat	1	4048	(0)	1263201
24397	6.6	0.9	0.3	chr15	24633927	24640029	(77351160)	C	L1PA5	LINE/L1	(1)	6153	11	1269066
1812	20.5	4.5	7.9	chr15	26071975	26072430	(75918759)	C	MER77B	LTR/ERVL	(260)	440	1	1270976
1253	21.4	1.6	7.7	chr15	26072431	26072547	(75918642)	C	L1MC4	LINE/L1	(1267)	6775	6666	1270977
25685	5.7	0.7	0.0	chr15	28154772	28160881	(73830308)	C	L1PA5	LINE/L1	(6)	6148	1	1273455
381	26.0	2.0	0.0	chr15	29550843	29550942	(72440247)	C	MIR3	SINE/MIR	(30)	178	77	1275613
537	24.3	5.9	2.7	chr15	29551090	29551237	(72439952)	+	MLT1N2	LTR/ERVL-MaLR	22	174	(388)	1275614
3124	17.8	2.5	1.1	chr15	29982838	29983378	(72007811)	C	MER44B	DNA/TcMar-Tigger	(1)	549	1	1276337
26122	6.1	0.6	1.4	chr15	30775178	30781390	(71209799)	+	L1PA4	LINE/L1	4	6137	(18)	1277598
26822	5.1	0.5	0.1	chr15	30848622	30854753	(71136436)	C	L1PA4	LINE/L1	(0)	6155	2	1277760
10728	10.1	3.5	2.9	chr15	31580862	31582430	(70408759)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	2	1278782
24674	7.6	0.7	0.1	chr15	34165959	34172091	(67819098)	+	L1PA6	LINE/L1	174	6327	(0)	1282388
10156	11.4	4.7	1.3	chr15	37452076	37453601	(64537588)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	1286937
9723	17.4	0.6	0.4	chr15	37712559	37714170	(64277019)	+	MSTA-int	LTR/ERVL-MaLR	8	1622	(9)	1287234
562	14.3	13.6	9.2	chr15	40603494	40603612	(61387577)	+	AluJo	SINE/Alu	3	127	(185)	1291532
2690	16.7	0.2	1.1	chr15	40603646	40604100	(61387089)	C	MER66B	LTR/ERV1	(35)	451	1	1291533
3677	20.0	15.7	9.3	chr15	40678684	40679326	(61311863)	C	L1MA3	LINE/L1	(5118)	2447	1653	1291691
2505	6.7	0.0	0.0	chr15	40679327	40679623	(61311566)	C	AluYf1	SINE/Alu	(14)	297	1	1291709
1940	15.7	0.3	1.6	chr15	41641793	41642098	(60349091)	C	AluJo	SINE/Alu	(8)	304	3	1293816
4399	16.8	3.1	3.6	chr15	41642099	41642311	(60348878)	C	L1MB8	LINE/L1	(675)	5503	5302	1293814
22644	6.9	1.5	0.1	chr15	42246296	42252380	(59738809)	C	L1PA6	LINE/L1	(0)	6154	5	1294801
13	7.0	10.0	0.0	chr15	43185117	43185146	(58806043)	+	(AATG)n	Simple_repeat	1	33	(0)	1296536
13	19.6	0.0	0.0	chr15	43185248	43185277	(58805912)	+	G-rich	Low_complexity	1	30	(0)	1296537
10952	9.0	1.5	0.3	chr15	47902665	47904214	(54086975)	C	THE1B-int	LTR/ERVL-MaLR	(11)	1569	1	1304037
6712	12.2	2.4	3.9	chr15	50893525	50894932	(51096257)	+	THE1B-int	LTR/ERVL-MaLR	1	1329	(322)	1308736
25074	6.5	0.3	0.2	chr15	52824191	52830141	(49161048)	+	L1PA6	LINE/L1	222	6152	(2)	1311929
16405	7.1	0.3	0.3	chr15	55944022	55947593	(46043596)	+	L1PA5	LINE/L1	9	3567	(2579)	1316463
23296	7.6	0.7	0.5	chr15	56561416	56567575	(45423614)	+	L1PA6	LINE/L1	1	6149	(5)	1317274
33	24.8	3.5	2.5	chr15	57323971	57324084	(44667105)	+	GA-rich	Low_complexity	1	118	(0)	1318503
13	6.2	11.8	0.0	chr15	57953866	57953899	(44037290)	+	GA-rich	Low_complexity	1	38	(0)	1319438
22079	7.7	1.4	0.5	chr15	58026399	58032514	(43958675)	+	L1PA4	LINE/L1	5	6151	(4)	1319523
1995	19.4	5.8	2.5	chr15	58360448	58360896	(43630293)	C	MLT1C	LTR/ERVL-MaLR	(0)	467	3	1320040
8098	18.7	2.4	0.9	chr15	58612162	58613833	(43377356)	+	L1MA4	LINE/L1	676	2469	(4699)	1320504
12	22.6	4.3	5.6	chr15	58933159	58933227	(43057962)	+	(GCGGTGGC)n	Simple_repeat	1	72	(0)	1321105
215	26.5	21.5	0.0	chr15	59533035	59533151	(42458038)	C	MIRc	SINE/MIR	(0)	268	120	1322253
17	11.3	2.4	4.7	chr15	62742914	62742955	(39248234)	+	(TTCA)n	Simple_repeat	1	43	(0)	1327355
61	24.9	5.3	2.5	chr15	63277309	63277571	(38713618)	+	(CCGCGCC)n	Simple_repeat	1	277	(0)	1328275
13	11.7	3.6	0.0	chr15	66842597	66842624	(35148565)	+	(GCGG)n	Simple_repeat	1	29	(0)	1335564
461	30.3	11.2	2.5	chr15	68776952	68777188	(33214001)	+	MIRb	SINE/MIR	3	262	(6)	1339042
1954	9.8	7.1	0.0	chr15	69462458	69462732	(32528457)	C	AluSp	SINE/Alu	(17)	296	1	1340266
9101	18.8	3.9	7.4	chr15	69767903	69769427	(32221762)	C	L1MB3	LINE/L1	(1547)	4599	3070	1340875
24723	6.6	0.6	0.7	chr15	69769434	69775195	(32215994)	+	L1PA6	LINE/L1	590	6327	(0)	1340877
24234	7.3	1.1	1.1	chr15	70367848	70370921	(31620268)	+	L1PA6	LINE/L1	134	3160	(2986)	1342020
402	28.6	5.3	2.3	chr15	70407964	70408121	(31583068)	C	MIRc	SINE/MIR	(87)	181	16	1342091
378	35.4	1.8	4.2	chr15	70408200	70408367	(31582822)	+	MIRb	SINE/MIR	87	250	(18)	1342092
242	33.1	3.5	10.2	chr15	71427210	71427542	(30563647)	C	L2b	LINE/L2	(10)	3416	3107	1343713
196	31.0	10.7	0.0	chr15	73683984	73684083	(28307106)	+	MIR1_Amn	SINE/MIR	9	120	(110)	1347536
16	16.8	0.0	0.0	chr15	73684186	73684212	(28306977)	+	G-rich	Low_complexity	1	27	(0)	1347537
12	26.9	0.0	4.1	chr15	73684332	73684380	(28306809)	+	(CCGGC)n	Simple_repeat	1	49	(0)	1347538
21	15.2	3.8	1.8	chr15	73684449	73684501	(28306688)	+	(CGGCG)n	Simple_repeat	1	55	(0)	1347539
291	23.7	7.8	6.7	chr15	74725151	74725329	(27265860)	+	MIR3	SINE/MIR	2	182	(26)	1349374
406	28.5	3.6	12.3	chr15	76311786	76311932	(25679257)	+	L2b	LINE/L2	3164	3311	(76)	1352366
23903	7.1	0.7	0.4	chr15	76887181	76893336	(25097853)	+	L1PA6	LINE/L1	1	6152	(2)	1353181
433	29.5	14.6	4.7	chr15	77565953	77566357	(24424832)	C	L2a	LINE/L2	(0)	3426	2975	1354268
656	31.9	5.1	0.0	chr15	79120950	79121134	(22870055)	C	MER91A	DNA/hAT-Tip100	(1)	195	1	1357284
886	26.5	9.6	9.8	chr15	80990936	80991424	(20999765)	C	MLT1J	LTR/ERVL-MaLR	(9)	503	16	1360495
261	32.2	6.4	2.9	chr15	81742119	81742463	(20248726)	+	L1M5	LINE/L1	2489	2846	(3300)	1361740
383	23.9	12.6	3.6	chr15	81845361	81845524	(20145665)	C	Tigger15a	DNA/TcMar-Tigger	(8)	707	527	1361897
1314	13.7	7.3	3.4	chr15	81845525	81845759	(20145430)	+	MLT1D	LTR/ERVL-MaLR	3	247	(258)	1361898
10158	11.4	5.7	1.6	chr15	81918530	81919617	(20071572)	+	THE1D-int	LTR/ERVL-MaLR	465	1579	(1)	1362028
20	24.8	2.7	2.6	chr15	82810046	82810077	(19181112)	+	(GGCTGG)n	Simple_repeat	1	60	(17)	1363497
13	6.5	5.6	5.3	chr15	82810078	82810113	(19181076)	+	G-rich	Low_complexity	1	38	(0)	1363498
20	24.8	2.7	2.6	chr15	82810114	82810120	(19181069)	+	(GGCTGG)n	Simple_repeat	61	77	(0)	1363497
420	35.0	8.7	3.7	chr15	83010833	83011235	(18979954)	C	L2c	LINE/L2	(36)	3351	2927	1363867
43	0.0	0.0	0.0	chr15	83066698	83066737	(18924452)	+	(GCCCG)n	Simple_repeat	1	40	(0)	1363978
341	14.3	0.0	1.8	chr15	83067477	83067533	(18923656)	C	MER5A	DNA/hAT-Charlie	(75)	114	59	1363979
2496	17.0	0.0	3.8	chr15	83193554	83194031	(18797158)	+	MER66B	LTR/ERV1	27	486	(0)	1364218
2355	17.9	5.8	1.1	chr15	83194032	83194569	(18796620)	+	L1MB3	LINE/L1	5616	6180	(3)	1364215
15850	7.5	0.8	0.0	chr15	83221525	83225415	(18765774)	+	L1P1	LINE/L1	4	3917	(2229)	1364263
10356	10.8	3.6	1.7	chr15	83630810	83632321	(18358868)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	39	1364923
11551	8.7	1.1	0.8	chr15	83756589	83758162	(18233027)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	1365091
23986	5.8	1.0	0.1	chr15	85051830	85057487	(16933702)	C	L1PA5	LINE/L1	(8)	6146	453	1367186
1454	12.1	0.0	0.0	chr15	85057461	85057666	(16933523)	C	L1PA5	LINE/L1	(5975)	209	4	1367186
24186	7.3	0.6	0.2	chr15	86205832	86211977	(15779212)	C	L1PA6	LINE/L1	(3)	6151	1	1369078
2214	11.8	0.0	1.3	chr15	88850658	88850961	(13140228)	+	AluSz	SINE/Alu	1	300	(12)	1373137
59	9.1	0.0	0.0	chr15	89776890	89776973	(12214216)	+	(AGGGGC)n	Simple_repeat	1	84	(0)	1374860
3905	6.2	7.2	0.0	chr15	92699181	92699695	(9291494)	C	L1P2	LINE/L1	(5115)	1069	515	1380255
8312	5.8	0.0	0.1	chr15	92699697	92701515	(9289674)	+	L1PA5	LINE/L1	4338	6154	(0)	1380256
25920	5.7	0.5	0.1	chr15	93389978	93396093	(8595096)	C	L1PA5	LINE/L1	(7)	6147	11	1381589
13353	7.7	0.3	0.7	chr15	93728858	93730774	(8260415)	C	L1PA6	LINE/L1	(963)	5183	3275	1382071
3962	9.7	0.0	0.0	chr15	93730787	93731343	(8259846)	C	L1PA6	LINE/L1	(5623)	561	5	1382071
26915	5.2	0.2	0.2	chr15	93792220	93798382	(8192807)	+	L1PA4	LINE/L1	1	6155	(0)	1382152
9195	11.6	10.4	1.1	chr15	94934027	94935503	(7055686)	C	THE1D-int	LTR/ERVL-MaLR	(2)	1629	1	1383709
9770	15.2	2.0	0.5	chr15	95200626	95202230	(6788959)	+	THE1C-int	LTR/ERVL-MaLR	3	1631	(0)	1384098
4615	24.2	4.6	3.7	chr15	95221734	95224499	(6766690)	C	L1MA8	LINE/L1	(3492)	4070	466	1384117
253	23.8	0.0	0.0	chr15	95224533	95224595	(6766594)	C	Alu	SINE/Alu	(0)	301	239	1384123
212	35.4	5.7	7.0	chr15	95268029	95268241	(6722948)	+	L2c	LINE/L2	2948	3157	(230)	1384189
11124	9.8	1.8	1.3	chr15	95699988	95701558	(6289631)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	1384830
11210	10.8	1.3	0.1	chr15	97986332	97987890	(4003299)	+	THE1A-int	LTR/ERVL-MaLR	2	1580	(0)	1387940
21	4.1	0.0	0.0	chr15	98728005	98728029	(3263160)	+	(T)n	Simple_repeat	1	25	(0)	1389096
651	9.8	0.6	1.1	chr15	98728031	98728141	(3263048)	C	LTR12F	LTR/ERV1	(113)	406	327	1389097
434	20.7	1.2	0.0	chr15	98782004	98782085	(3209104)	C	FLAM_C	SINE/Alu	(19)	124	42	1389165
24360	5.9	0.6	0.2	chr15	99376549	99382379	(2608810)	C	L1PA5	LINE/L1	(14)	6140	297	1390044
702	5.7	0.0	0.0	chr15	99382365	99382452	(2608737)	C	L1PA5	LINE/L1	(6057)	98	11	1390044
26138	5.2	0.4	0.4	chr15	100067772	100073922	(1917267)	+	L1PA4	LINE/L1	6	6152	(3)	1390983
24196	6.2	0.9	0.1	chr15	100673583	100679696	(1311493)	C	L1PA6	LINE/L1	(5)	6322	174	1391788
20	28.8	2.0	4.0	chr15	101251700	101251798	(739391)	+	(CGG)n	Simple_repeat	1	101	(0)	1392534
244	26.5	8.4	0.0	chr15	101295783	101295880	(695309)	C	L1ME3	LINE/L1	(19)	6154	6048	1392606
1889	25.1	8.9	3.5	chr15	101295903	101296655	(694534)	C	L1ME3	LINE/L1	(167)	5995	5168	1392606
15	15.3	0.0	5.0	chr15	101723942	101723981	(267208)	+	(GCAGG)n	Simple_repeat	1	40	(0)	1393180
10842	10.7	1.9	1.4	chr15	101862232	101863803	(127386)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	1393377
14	25.8	0.0	3.7	chr16	600352	600405	(89737940)	+	(TAATAG)n	Simple_repeat	1	54	(0)	1394993
15	18.9	2.3	2.2	chr16	668148	668191	(89670154)	+	(GGTCCG)n	Simple_repeat	1	45	(0)	1395064
13	28.1	0.0	4.9	chr16	668250	668310	(89670035)	+	G-rich	Low_complexity	1	61	(0)	1395065
17	24.5	0.0	7.7	chr16	914760	914837	(89423508)	+	(TCCC)n	Simple_repeat	1	78	(0)	1395327
17	32.7	4.5	1.7	chr16	3520848	3520961	(86817384)	+	(CTCTTC)n	Simple_repeat	1	117	(0)	1399322
20	4.1	0.0	0.0	chr16	3871175	3871199	(86467146)	+	(TC)n	Simple_repeat	1	25	(0)	1399953
41	0.0	0.0	0.0	chr16	3871200	3871234	(86467111)	+	(CA)n	Simple_repeat	1	35	(0)	1399954
11	21.9	10.9	0.0	chr16	5097964	5098027	(85240318)	+	(GGTCCAG)n	Simple_repeat	1	71	(0)	1402556
21261	7.5	3.8	0.7	chr16	12603813	12609764	(77728581)	+	L1PA4	LINE/L1	1	6137	(18)	1418237
14	9.3	2.5	7.3	chr16	15056033	15056072	(75282273)	+	(GCCGCCC)n	Simple_repeat	1	41	(0)	1423502
9910	11.9	3.2	0.4	chr16	15980732	15982256	(74356089)	C	THE1C-int	LTR/ERVL-MaLR	(11)	1569	1	1425762
268	22.4	4.3	0.0	chr16	17068093	17068159	(73270186)	C	MLT1H	LTR/ERVL-MaLR	(0)	562	493	1428245
14	14.8	0.0	4.8	chr16	17068242	17068256	(73270089)	+	(AAGTCCC)n	Simple_repeat	1	15	(0)	1428246
2423	9.2	0.3	0.9	chr16	17068257	17068571	(73269774)	+	AluSq2	SINE/Alu	1	313	(0)	1428247
26489	5.6	0.2	0.2	chr16	17733166	17739300	(72599045)	+	L1PA5	LINE/L1	11	6147	(7)	1429727
12	24.3	0.0	0.0	chr16	21502176	21502209	(68836136)	+	GA-rich	Low_complexity	1	34	(0)	1438015
2232	11.0	0.3	0.0	chr16	22845998	22846289	(67492056)	+	AluSx1	SINE/Alu	3	295	(17)	1440941
19	21.5	2.3	0.0	chr16	22846291	22846334	(67492011)	+	(TA)n	Simple_repeat	1	45	(0)	1440942
25202	6.1	1.3	0.1	chr16	23093874	23099522	(67238823)	+	L1P2	LINE/L1	174	5868	(459)	1441426
2252	9.6	1.0	0.0	chr16	23677898	23678190	(66660155)	+	AluSz	SINE/Alu	1	296	(16)	1442841
239	27.4	14.7	3.8	chr16	23678191	23678252	(66660093)	C	MER102b	DNA/hAT-Charlie	(271)	70	9	1442840
591	22.6	0.0	4.6	chr16	23678377	23678529	(66659816)	C	MER5A1	DNA/hAT-Charlie	(2)	164	19	1442842
15	8.9	0.0	0.0	chr16	28823492	28823515	(61514830)	+	(CGC)n	Simple_repeat	1	24	(0)	1454526
17	17.2	0.0	2.4	chr16	31073753	31073793	(59264552)	+	G-rich	Low_complexity	1	41	(0)	1459562
26096	5.1	0.9	0.1	chr16	31687222	31693324	(58645021)	+	L1PA4	LINE/L1	3	6155	(0)	1460695
10470	9.9	5.1	0.3	chr16	32372346	32373824	(57964521)	C	L1P2	LINE/L1	(4628)	1556	4	1461539
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
888	6.7	4.2	0.7	chr16	33340034	33340155	(56998190)	C	LTR13A	LTR/ERVK	(840)	126	1	1462584
404	19.2	1.4	0.0	chr16	34062434	34062506	(56275839)	+	AluSz6	SINE/Alu	225	298	(14)	1463557
316	25.0	0.0	0.0	chr16	34062726	34062789	(56275556)	+	AluYa8	SINE/Alu	223	286	(24)	1463558
390	15.6	3.0	0.0	chr16	34062893	34062956	(56275389)	+	AluYj4	SINE/Alu	224	289	(22)	1463559
376	15.6	3.0	0.0	chr16	34097527	34097590	(56240755)	C	AluJo	SINE/Alu	(22)	290	225	1463604
26	2.1	7.5	3.5	chr16	34699521	34699573	(55638772)	+	(TGATGATTCCAT)n	Simple_repeat	1	57	(0)	1464055
25177	6.2	0.3	0.4	chr16	47347060	47353218	(42985127)	+	L1PA4	LINE/L1	2	6153	(2)	1467068
16461	7.6	1.1	0.7	chr16	47422812	47425579	(42912766)	C	L1PA6	LINE/L1	(3383)	2763	5	1467173
373	37.7	7.0	3.3	chr16	47476922	47477344	(42861001)	+	L2c	LINE/L2	2921	3360	(27)	1467232
25770	6.4	0.6	0.0	chr16	47909898	47916004	(42422341)	+	L1PA5	LINE/L1	11	6152	(2)	1467806
1746	26.7	8.7	8.9	chr16	48372916	48374301	(41964044)	+	L2a	LINE/L2	2057	3426	(0)	1468624
484	28.1	8.4	1.0	chr16	48609477	48609674	(41728671)	C	MIR	SINE/MIR	(33)	229	16	1469088
12	22.8	5.0	6.0	chr16	48609688	48609767	(41728578)	+	G-rich	Low_complexity	1	84	(0)	1469089
17	20.8	0.0	4.2	chr16	48609973	48610020	(41728325)	+	(GGC)n	Simple_repeat	1	48	(0)	1469090
16	15.6	0.0	2.6	chr16	48610075	48610112	(41728233)	+	(CCGCCCG)n	Simple_repeat	1	38	(0)	1469091
27	24.6	6.5	1.5	chr16	49282333	49282455	(41055890)	+	G-rich	Low_complexity	1	131	(0)	1470274
205	33.9	2.3	3.0	chr16	49282657	49282790	(41055555)	C	L2b	LINE/L2	(1)	3374	3242	1470275
26160	6.2	1.6	0.1	chr16	50343340	50349410	(39988935)	+	L1PA5	LINE/L1	4	6154	(0)	1472285
14	16.9	2.9	0.0	chr16	50701141	50701174	(39637171)	+	(TCAT)n	Simple_repeat	1	35	(0)	1473014
243	28.4	0.0	0.0	chr16	50701219	50701279	(39637066)	+	L2b	LINE/L2	3322	3387	(0)	1473015
26203	6.4	0.2	0.0	chr16	51248906	51255051	(39083294)	C	L1PA4	LINE/L1	(0)	6155	2	1474026
25503	6.0	0.2	0.0	chr16	51329810	51335954	(39002391)	+	L1PA5	LINE/L1	1	6153	(1)	1474161
791	25.2	2.2	0.9	chr16	51434933	51435156	(38903189)	C	MIR	SINE/MIR	(11)	251	25	1474358
1724	20.0	4.1	5.8	chr16	51597917	51598163	(38740182)	+	MLT1C	LTR/ERVL-MaLR	9	254	(213)	1474638
2091	15.1	2.1	0.9	chr16	51598164	51598498	(38739847)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	1474639
1724	20.0	4.1	5.8	chr16	51598499	51598717	(38739628)	+	MLT1C	LTR/ERVL-MaLR	255	467	(0)	1474638
24718	5.8	0.2	0.3	chr16	52007596	52013761	(38324584)	C	L1PA4	LINE/L1	(0)	6155	1	1475350
23829	6.8	0.6	0.1	chr16	52333410	52339534	(37998811)	+	L1PA5	LINE/L1	4	6153	(1)	1475853
285	22.7	11.4	7.0	chr16	57600263	57600404	(32737941)	+	MIR3	SINE/MIR	38	186	(22)	1485388
25815	6.7	0.6	0.1	chr16	58779888	58785996	(31552349)	C	L1PA5	LINE/L1	(2)	6152	11	1487842
21441	5.7	0.6	0.5	chr16	59830706	59836849	(30501496)	C	L1PA4	LINE/L1	(2)	6153	1	1489401
13	14.0	4.7	4.4	chr16	69565635	69565677	(20772668)	+	(CTCTG)n	Simple_repeat	1	45	(0)	1506104
14	5.0	0.0	0.0	chr16	69565978	69565998	(20772347)	+	(GCG)n	Simple_repeat	1	21	(0)	1506105
1715	22.4	13.2	4.4	chr16	71462484	71463159	(18875186)	C	MER20B	DNA/hAT-Charlie	(15)	768	25	1509731
17331	6.9	1.4	0.3	chr16	71508514	71511310	(18827035)	C	L1P2	LINE/L1	(3330)	2816	4	1509819
11	14.8	4.9	4.7	chr16	74813188	74813228	(15525117)	+	G-rich	Low_complexity	1	43	(0)	1515494
306	8.7	6.1	0.0	chr16	77676158	77676203	(12662142)	C	MADE1	DNA/TcMar-Mariner	(0)	80	32	1520269
38	6.0	1.9	0.0	chr16	79599176	79599227	(10739118)	+	(CCG)n	Simple_repeat	1	53	(0)	1523834
25842	6.7	0.5	0.1	chr16	82203771	82209885	(8128460)	C	L1PA5	LINE/L1	(0)	6154	11	1528838
276	30.8	1.8	9.8	chr16	83891732	83891869	(6446476)	C	L2c	LINE/L2	(2)	3424	3288	1531798
281	23.3	12.1	0.0	chr16	83891895	83891967	(6446378)	+	L1M5	LINE/L1	5568	5650	(592)	1531799
472	23.6	6.0	2.1	chr16	83891970	83892112	(6446233)	+	MER5B	DNA/hAT-Charlie	3	151	(27)	1531800
237	19.5	0.0	0.0	chr16	83892128	83892168	(6446177)	C	MER5B	DNA/hAT-Charlie	(78)	100	60	1531801
2041	15.5	0.3	0.7	chr16	83892174	83892482	(6445863)	C	AluSz	SINE/Alu	(4)	308	1	1531802
9753	15.4	4.2	0.3	chr16	90054057	90055622	(282723)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	1542295
25961	6.3	0.3	0.3	chr17	634397	640538	(82616903)	C	L1PA5	LINE/L1	(1)	6153	11	1545512
12	8.0	0.0	9.4	chr17	752273	752304	(82505137)	+	(CCGCC)n	Simple_repeat	1	32	(0)	1545737
12	22.5	3.9	7.4	chr17	2303520	2303559	(80953882)	+	G-rich	Low_complexity	1	68	(13)	1548855
15	17.7	0.0	0.0	chr17	2303560	2303591	(80953850)	+	GA-rich	Low_complexity	1	32	(0)	1548856
30	23.5	4.4	4.3	chr17	2337519	2337653	(80919788)	+	(GGCGGC)n	Simple_repeat	1	141	(0)	1548930
17	22.6	0.0	2.1	chr17	2337839	2337886	(80919555)	+	G-rich	Low_complexity	1	48	(0)	1548931
24574	6.8	1.1	0.2	chr17	3337283	3343391	(79914050)	C	L1PA5	LINE/L1	(8)	6146	5	1550891
14	21.1	0.0	2.5	chr17	4366693	4366753	(78890688)	+	(CCCG)n	Simple_repeat	1	59	(0)	1552867
23	23.2	4.5	2.1	chr17	4807086	4807219	(78450222)	+	(GCCCCG)n	Simple_repeat	1	137	(0)	1553827
242	25.7	1.4	0.0	chr17	5281840	5281909	(77975532)	C	MIRc	SINE/MIR	(144)	124	54	1554824
14	0.0	0.0	0.0	chr17	5282377	5282394	(77975047)	+	(GGC)n	Simple_repeat	1	18	(0)	1554825
1628	9.9	3.0	0.9	chr17	5527149	5527373	(77730068)	C	MER30	DNA/hAT-Charlie	(0)	230	1	1555316
568	27.1	0.0	5.6	chr17	6163854	6164047	(77093394)	C	MIRb	SINE/MIR	(5)	263	73	1556512
9846	15.4	0.9	0.5	chr17	7067309	7068931	(76188510)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	3	1558167
13	22.5	2.0	3.9	chr17	7835734	7835783	(75421658)	+	(CACGCC)n	Simple_repeat	1	51	(0)	1559620
226	27.4	0.0	0.0	chr17	8221309	8221359	(75036082)	+	MIRc	SINE/MIR	103	153	(115)	1560358
659	1.4	0.0	0.0	chr17	8221548	8221619	(75035822)	+	tRNA-Gly-GGA	tRNA	1	72	(3)	1560359
15	31.5	0.0	1.6	chr17	8435787	8435850	(74821591)	+	(CCCGC)n	Simple_repeat	1	64	(0)	1560832
345	31.6	14.9	0.6	chr17	16438620	16438801	(66818640)	C	MIRc	SINE/MIR	(7)	261	56	1574991
662	26.7	9.2	1.9	chr17	18857720	18857887	(64399554)	C	MIRb	SINE/MIR	(65)	203	22	1579271
17	15.3	2.7	0.0	chr17	18858222	18858258	(64399183)	+	G-rich	Low_complexity	1	38	(0)	1579274
481	26.5	8.9	2.9	chr17	19647784	19648024	(63609417)	C	L2a	LINE/L2	(1123)	2296	2040	1581017
13	17.4	0.0	2.9	chr17	19648298	19648331	(63609110)	+	GA-rich	Low_complexity	1	34	(0)	1581022
15	19.1	2.6	2.6	chr17	21280325	21280362	(61977079)	+	(TG)n	Simple_repeat	1	39	(0)	1583995
1235	24.4	10.8	1.0	chr17	21280435	21280704	(61976737)	+	L2a	LINE/L2	2962	3249	(177)	1583996
16108	9.4	1.0	0.0	chr17	22500001	22503062	(60754379)	C	L1P1	LINE/L1	(3042)	3104	11	1585591
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
19010	6.8	0.6	0.1	chr17	27028612	27033096	(56224345)	+	L1P1	LINE/L1	7	4510	(1636)	1586111
2504	8.7	0.0	0.0	chr17	28742791	28743102	(54514339)	+	AluSx1	SINE/Alu	1	312	(0)	1589231
17	13.9	0.0	6.7	chr17	29180394	29180438	(54077003)	+	(AGCGC)n	Simple_repeat	1	45	(0)	1590037
23927	6.8	0.3	1.0	chr17	30406815	30413023	(52844418)	C	L1PA6	LINE/L1	(0)	6154	5	1592535
194	21.9	0.0	0.0	chr17	30824997	30825037	(52432404)	C	MIR	SINE/MIR	(114)	148	108	1593361
1647	10.0	11.6	0.4	chr17	30825044	30825168	(52432273)	+	AluJb	SINE/Alu	1	125	(187)	1593362
1646	18.8	1.0	3.0	chr17	32227003	32227306	(51030135)	C	AluJb	SINE/Alu	(14)	298	1	1596349
10919	10.1	2.9	3.8	chr17	32980881	32982475	(50274966)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	1597736
26766	5.6	0.1	0.4	chr17	35200293	35204957	(48052484)	C	L1PA4	LINE/L1	(1491)	4655	1	1601906
1165	13.2	2.4	8.7	chr17	38881246	38881464	(44375977)	C	AluJb	SINE/Alu	(0)	312	108	1608801
10665	10.5	2.7	3.8	chr17	39822921	39824517	(43432924)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(0)	1610835
16	13.7	0.0	2.9	chr17	40121986	40122019	(43135422)	+	(GGC)n	Simple_repeat	1	34	(0)	1611391
20	26.4	5.1	1.9	chr17	40122194	40122291	(43135150)	+	G-rich	Low_complexity	1	103	(0)	1611392
2293	7.4	2.0	3.6	chr17	42458284	42458592	(40798849)	+	AluSg	SINE/Alu	1	304	(6)	1615701
17	9.3	2.8	2.7	chr17	42458826	42458861	(40798580)	+	(GCGGGG)n	Simple_repeat	1	37	(0)	1615702
301	21.1	8.8	11.9	chr17	43232365	43232482	(40024959)	+	MER96B	DNA/hAT-Tip100	1	114	(303)	1617360
2018	19.7	0.5	1.4	chr17	43232486	43232908	(40024533)	+	LTR13	LTR/ERVK	1	419	(588)	1617361
7985	10.8	0.6	4.6	chr17	43319366	43320150	(39937291)	C	THE1B-int	LTR/ERVL-MaLR	(298)	1282	501	1617594
2112	11.8	0.0	0.0	chr17	43320151	43320454	(39936987)	C	AluSc	SINE/Alu	(0)	309	1	1617597
230	29.5	6.0	10.2	chr17	43724002	43724140	(39533301)	+	L2c	LINE/L2	3250	3373	(2)	1618479
24489	6.1	1.0	0.1	chr17	43792515	43798608	(39458833)	C	L1PA5	LINE/L1	(19)	6135	4	1618617
39	24.9	1.0	0.0	chr17	44219550	44219649	(39037792)	+	(GCG)n	Simple_repeat	1	101	(0)	1619463
21	15.4	3.1	6.0	chr17	44219706	44219770	(39037671)	+	(CCG)n	Simple_repeat	1	67	(0)	1619464
20	20.1	0.0	5.2	chr17	44219770	44219827	(39037614)	+	GA-rich	Low_complexity	1	58	(0)	1619465
14	21.1	0.0	6.1	chr17	44219884	44219932	(39037509)	+	(CGCC)n	Simple_repeat	1	49	(0)	1619466
11	28.4	0.0	0.0	chr17	44594169	44594207	(38663234)	+	GA-rich	Low_complexity	1	39	(0)	1620280
2356	10.1	0.0	0.0	chr17	44594502	44594799	(38662642)	C	AluSx1	SINE/Alu	(14)	298	1	1620281
25	24.9	2.9	3.8	chr17	45148492	45148593	(38108848)	+	GA-rich	Low_complexity	1	105	(0)	1621434
14	16.4	2.9	0.0	chr17	45148579	45148612	(38108829)	+	(GAGCA)n	Simple_repeat	1	35	(0)	1621435
356	25.4	2.4	4.7	chr17	45722506	45722633	(37534808)	+	MamRep564	Unknown	75	199	(158)	1622659
65	24.6	0.0	0.0	chr17	46866344	46866491	(36390950)	+	(GT)n	Simple_repeat	1	148	(0)	1624877
10691	10.8	3.0	3.5	chr17	47268247	47269835	(35987606)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	1625697
29	24.0	4.0	1.9	chr17	47693965	47694101	(35563340)	+	GA-rich	Low_complexity	1	139	(0)	1626574
430	33.0	7.5	1.1	chr17	48047298	48047472	(35209969)	+	MER5A	DNA/hAT-Charlie	1	187	(2)	1627187
19	4.0	3.9	0.0	chr17	49515375	49515400	(33742041)	+	(AC)n	Simple_repeat	1	27	(0)	1630080
15	0.0	0.0	0.0	chr17	49515400	49515416	(33742025)	+	(AG)n	Simple_repeat	1	17	(0)	1630081
12	21.5	4.4	2.1	chr17	49515437	49515481	(33741960)	+	(GCAG)n	Simple_repeat	1	47	(0)	1630082
14	27.1	0.0	0.0	chr17	49515586	49515629	(33741812)	+	(CCTGAG)n	Simple_repeat	1	44	(0)	1630083
9337	10.4	3.6	0.7	chr17	50224992	50226262	(33031179)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	267	1631348
21230	7.9	1.5	0.8	chr17	51304949	51311073	(31946368)	+	L1PA6	LINE/L1	5	6150	(4)	1633534
23890	6.3	0.9	0.1	chr17	52351277	52356891	(30900550)	C	L1PA6	LINE/L1	(5)	6322	674	1635275
1051	19.2	0.5	1.6	chr17	52356892	52357078	(30900363)	+	AluJb	SINE/Alu	114	298	(14)	1635276
13250	7.6	0.3	0.0	chr17	53339892	53341585	(29915856)	+	L1P2	LINE/L1	5	1703	(4481)	1636602
2134	25.9	5.5	7.7	chr17	57182751	57183499	(26073942)	+	L1MEc	LINE/L1	45	775	(5625)	1642833
2286	12.0	0.3	0.0	chr17	57183829	57184137	(26073304)	C	AluSx1	SINE/Alu	(0)	312	3	1642834
13	9.1	0.0	3.9	chr17	58517548	58517573	(24739868)	+	(AGGG)n	Simple_repeat	1	26	(0)	1645134
24041	6.5	0.9	0.2	chr17	58846271	58852395	(24405046)	C	L1PA5	LINE/L1	(1)	6153	4	1645910
11534	6.6	0.4	0.1	chr17	60341534	60343056	(22914385)	C	L1P2	LINE/L1	(4651)	1533	7	1649035
25	22.6	2.8	6.4	chr17	60392137	60392243	(22865198)	+	(CTC)n	Simple_repeat	1	110	(0)	1649144
7832	11.1	1.5	0.2	chr17	60432581	60433660	(22823781)	C	THE1B-int	LTR/ERVL-MaLR	(2)	1578	485	1649253
22479	6.9	0.9	0.3	chr17	60483693	60488326	(22769115)	C	L1PA6	LINE/L1	(956)	5190	532	1649349
1092	17.5	4.0	0.4	chr17	60488358	60488598	(22768843)	+	L1MB8	LINE/L1	5840	6089	(89)	1649351
2565	8.2	0.3	0.3	chr17	61251288	61251593	(22005848)	+	AluSq2	SINE/Alu	1	306	(7)	1650745
332	24.2	2.9	4.8	chr17	61394932	61395035	(21862406)	C	MIR3	SINE/MIR	(25)	183	82	1650995
18312	5.8	1.5	0.1	chr17	61673058	61676705	(21580736)	+	L1PA6	LINE/L1	9	3694	(2452)	1651431
23243	6.5	0.9	1.0	chr17	62356954	62363149	(20894292)	+	L1PA8	LINE/L1	4	6171	(1)	1652797
2082	8.4	0.3	9.6	chr17	63551765	63552099	(19705342)	+	AluSx	SINE/Alu	1	304	(8)	1654905
14	15.7	0.0	5.1	chr17	63842976	63843014	(19414427)	+	(CCCAG)n	Simple_repeat	1	39	(0)	1655441
2391	6.7	1.0	0.3	chr17	63843361	63843659	(19413782)	+	AluSq2	SINE/Alu	9	309	(4)	1655442
1243	16.9	12.4	0.4	chr17	64437669	64437924	(18819517)	+	LTR8B	LTR/ERV1	398	688	(132)	1656580
8642	10.2	1.3	3.5	chr17	64437915	64438605	(18818836)	C	THE1D-int	LTR/ERVL-MaLR	(439)	1192	506	1656581
681	24.3	5.2	0.9	chr17	64459563	64459789	(18797652)	+	MIRb	SINE/MIR	6	260	(8)	1656635
63	0.0	0.0	4.3	chr17	64459978	64460047	(18797394)	+	(TTTA)n	Simple_repeat	1	70	(0)	1656636
1821	14.2	4.4	5.6	chr17	64664648	64664949	(18592492)	+	AluJb	SINE/Alu	1	298	(14)	1657024
232	16.7	15.5	0.0	chr17	64664952	64665011	(18592430)	+	L1ME3D	LINE/L1	6101	6171	(71)	1657025
14	15.8	2.7	2.6	chr17	65056168	65056204	(18201237)	+	(GCCC)n	Simple_repeat	1	38	(0)	1657848
20	21.3	1.4	5.5	chr17	65056239	65056311	(18201130)	+	(CCCCGC)n	Simple_repeat	1	70	(0)	1657849
17	30.7	0.0	1.6	chr17	65056597	65056658	(18200783)	+	(GCC)n	Simple_repeat	1	62	(0)	1657850
13	20.4	5.6	3.5	chr17	65056651	65056704	(18200737)	+	(CGG)n	Simple_repeat	1	57	(0)	1657851
21	11.9	12.5	0.0	chr17	65056717	65056809	(18200632)	+	(GCAGG)n	Simple_repeat	1	104	(0)	1657852
386	30.1	13.5	5.7	chr17	66200569	66200744	(17056697)	+	MIRb	SINE/MIR	59	250	(18)	1659822
258	26.7	1.3	0.0	chr17	66200765	66200839	(17056602)	+	L3	LINE/CR1	2801	2876	(1223)	1659823
15	18.6	0.0	0.0	chr17	66200840	66200860	(17056581)	+	(CATGTG)n	Simple_repeat	1	21	(0)	1659824
31	3.3	0.0	0.0	chr17	66200861	66200891	(17056550)	+	(AC)n	Simple_repeat	1	31	(0)	1659825
15	18.6	0.0	0.0	chr17	66200892	66200907	(17056534)	+	(CATGTG)n	Simple_repeat	4	19	(0)	1659826
40	31.3	2.5	1.2	chr17	66200906	66201063	(17056378)	+	(CA)n	Simple_repeat	1	162	(0)	1659827
28080	2.6	0.3	0.0	chr17	68408124	68414142	(14843299)	C	L1PA3	LINE/L1	(0)	6155	124	1664163
13603	13.2	4.5	1.9	chr17	68414143	68417108	(14840333)	C	L1PB1	LINE/L1	(2119)	4743	1647	1664162
11839	8.4	0.9	0.5	chr17	69697640	69699212	(13558229)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	1666198
1885	17.0	0.6	0.0	chr17	71842913	71843242	(11414199)	+	MER57E1	LTR/ERV1	39	370	(2)	1669395
698	27.2	12.9	5.2	chr17	71843247	71843672	(11413769)	+	MLT1H	LTR/ERVL-MaLR	86	549	(0)	1669394
1911	15.0	0.3	0.7	chr17	74392591	74392884	(8864557)	+	AluJo	SINE/Alu	1	293	(19)	1674066
1113	28.6	6.5	5.4	chr17	74392943	74393385	(8864056)	+	MLT1J2	LTR/ERVL-MaLR	1	448	(0)	1674067
544	27.8	6.6	4.8	chr17	74947839	74948046	(8309395)	C	MIR	SINE/MIR	(33)	229	18	1675051
252	32.6	8.3	2.0	chr17	74948099	74948245	(8309196)	C	L2c	LINE/L2	(179)	3208	3052	1675052
2124	12.4	0.3	2.2	chr17	74948246	74948380	(8309061)	+	AluJb	SINE/Alu	5	134	(178)	1675053
2717	5.5	0.0	0.0	chr17	75030177	75030520	(8226921)	+	LTR14A	LTR/ERVK	1	344	(0)	1675199
642	0.0	0.0	0.0	chr17	75033906	75033978	(8223463)	+	tRNA-Arg-AGG	tRNA	1	73	(3)	1675212
630	0.0	0.0	0.0	chr17	75034432	75034503	(8222938)	C	tRNA-Arg-AGG	tRNA	(4)	72	1	1675213
35	8.2	5.9	2.8	chr17	75603435	75603502	(7653939)	+	(CT)n	Simple_repeat	1	72	(0)	1676454
29	15.6	5.3	6.7	chr17	75603503	75603547	(7653894)	+	(CCTCTCT)n	Simple_repeat	2	120	(0)	1676455
12	18.8	2.6	2.6	chr17	75892357	75892394	(7365047)	+	(CTGCGC)n	Simple_repeat	1	39	(0)	1676977
12	28.6	0.0	5.0	chr17	76353621	76353680	(6903761)	+	G-rich	Low_complexity	1	60	(0)	1677879
12	23.2	0.0	4.5	chr17	77140636	77140679	(6116762)	+	(CCGCC)n	Simple_repeat	1	44	(0)	1679537
254	30.6	3.0	1.0	chr17	79514358	79514456	(3742985)	C	MIRb	SINE/MIR	(34)	234	134	1683524
12	8.2	0.0	9.4	chr17	79844190	79844221	(3413220)	+	(CTGGC)n	Simple_repeat	1	32	(0)	1684018
15	16.0	2.9	0.0	chr17	81340058	81340093	(1917348)	+	(CCCCTC)n	Simple_repeat	1	37	(0)	1686140
2432	7.0	0.0	0.0	chr17	81340217	81340514	(1916927)	C	AluY	SINE/Alu	(13)	298	1	1686141
12	9.6	8.6	2.6	chr17	81397107	81397141	(1860300)	+	(GCGCG)n	Simple_repeat	1	38	(0)	1686228
19	17.2	0.0	0.0	chr17	81397396	81397428	(1860013)	+	A-rich	Low_complexity	1	33	(0)	1686229
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
26482	4.8	0.9	0.1	chr18	2860238	2866343	(77506942)	C	L1PA4	LINE/L1	(1)	6154	1	1693391
12616	8.5	0.7	0.0	chr18	3240636	3242204	(77131081)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	1694014
24457	5.9	0.4	0.2	chr18	6699819	6705944	(73667341)	+	L1PA5	LINE/L1	11	6146	(8)	1698929
250	31.7	0.0	0.0	chr18	9334063	9334122	(71039163)	C	MER5A	DNA/hAT-Charlie	(67)	122	63	1702840
243	34.5	6.8	5.3	chr18	11225540	11225726	(69147559)	C	LTR88c	LTR/Gypsy?	(2)	860	671	1705580
562	19.6	3.8	2.6	chr18	11226018	11226220	(69147065)	C	LTR37A	LTR/ERV1	(0)	468	252	1705581
1017	19.3	3.3	3.2	chr18	12890554	12890865	(67482420)	+	LTR41	LTR/ERVL	1	419	(349)	1708311
987	22.4	12.1	4.8	chr18	12890874	12891285	(67482000)	+	MLT1C	LTR/ERVL-MaLR	6	451	(16)	1708312
24765	6.1	1.2	0.0	chr18	13082458	13084761	(67288524)	C	L1PA6	LINE/L1	(3824)	2322	1	1708628
977	30.7	12.3	1.5	chr18	13812748	13813340	(66559945)	C	MamGypsy2-I	LTR/Gypsy	(3308)	858	193	1709550
23933	6.3	0.6	0.1	chr18	14064987	14071100	(66302185)	+	L1PA5	LINE/L1	3	6148	(6)	1709857
965	24.1	7.7	0.8	chr18	14172426	14174423	(66198862)	+	G-rich	Low_complexity	1991	4134	(0)	1709973
937	16.9	14.1	4.3	chr18	22223402	22223611	(58149674)	+	L1MC1	LINE/L1	6098	6331	(2)	1714178
354	29.6	5.0	10.9	chr18	22296524	22296716	(58076569)	+	L1MEc	LINE/L1	38	218	(6182)	1714321
334	27.1	11.1	6.5	chr18	22296735	22296888	(58076397)	+	L2a	LINE/L2	3265	3426	(0)	1714322
429	32.9	8.2	3.5	chr18	22296917	22297231	(58076054)	+	L2	LINE/L2	2612	2942	(477)	1714318
20	16.6	2.0	2.0	chr18	22334329	22334377	(58038908)	+	(ATGA)n	Simple_repeat	1	50	(0)	1714395
16	16.9	3.0	0.0	chr18	22334660	22334692	(58038593)	+	GA-rich	Low_complexity	1	34	(0)	1714396
8943	12.7	6.2	0.9	chr18	23269505	23271000	(57102285)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	1715900
2071	12.3	0.3	0.0	chr18	23727341	23727624	(56645661)	C	AluSx	SINE/Alu	(27)	285	1	1716771
919	21.3	1.4	4.2	chr18	23727625	23727701	(56645584)	C	MER5C	DNA/hAT-Charlie	(242)	71	2	1716769
1955	15.7	0.0	1.6	chr18	23727723	23728034	(56645251)	C	AluJr	SINE/Alu	(5)	307	1	1716772
9513	11.2	3.2	12.0	chr18	25570892	25572630	(54800655)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	1719531
2003	13.0	0.0	2.4	chr18	26505889	26506181	(53867104)	C	AluSx	SINE/Alu	(26)	286	1	1721026
312	36.8	9.2	3.0	chr18	26506185	26506520	(53866765)	C	L2b	LINE/L2	(16)	3359	3001	1721027
10051	11.8	5.2	0.2	chr18	29604891	29606391	(50766894)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	1725259
7604	20.2	5.8	1.1	chr18	29996949	29998508	(50374777)	+	MSTA-int	LTR/ERVL-MaLR	15	1651	(0)	1725745
16	25.7	1.8	1.7	chr18	31102451	31102507	(49270778)	+	(CGGCCC)n	Simple_repeat	1	58	(0)	1727208
18	25.0	0.0	3.3	chr18	32470449	32470508	(47902777)	+	(CCG)n	Simple_repeat	1	60	(0)	1729399
17	15.5	2.8	0.0	chr18	32470786	32470821	(47902464)	+	(CCT)n	Simple_repeat	1	37	(0)	1729400
22	20.9	1.8	0.0	chr18	32470926	32470980	(47902305)	+	(CCGCCT)n	Simple_repeat	1	56	(0)	1729401
7429	13.3	9.7	1.0	chr18	33863434	33864707	(46508578)	C	THE1D-int	LTR/ERVL-MaLR	(181)	1399	3	1731219
11671	9.7	0.2	0.7	chr18	34265573	34267160	(46106125)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	1731709
387	34.7	6.1	13.5	chr18	34651535	34651781	(45721504)	C	L2b	LINE/L2	(1)	3374	3124	1732233
1946	18.3	0.0	0.6	chr18	34651782	34652083	(45721202)	+	AluJo	SINE/Alu	1	300	(12)	1732234
26081	5.8	0.8	0.1	chr18	34665430	34671527	(45701758)	C	L1PA4	LINE/L1	(7)	6148	13	1732256
9665	11.1	5.7	3.8	chr18	34905397	34906945	(45466340)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	1732576
25747	5.5	0.8	0.1	chr18	35627589	35633705	(44739580)	+	L1PA5	LINE/L1	1	6152	(2)	1733605
17	14.5	0.0	4.8	chr18	35777109	35777150	(44596135)	+	(TTCCCCA)n	Simple_repeat	1	42	(0)	1733794
26823	5.2	0.1	0.1	chr18	35897481	35903637	(44469648)	+	L1PA4	LINE/L1	1	6154	(1)	1733947
8234	8.3	12.3	0.1	chr18	36064075	36065175	(44308110)	+	LTR12D	LTR/ERV1	1	1254	(0)	1734235
367	26.4	6.3	2.4	chr18	36511437	36511603	(43861682)	C	MER5B	DNA/hAT-Charlie	(0)	178	5	1734887
233	22.9	20.4	2.7	chr18	36511615	36511726	(43861559)	C	MER5A	DNA/hAT-Charlie	(26)	163	27	1734888
15	18.4	2.6	0.0	chr18	36709122	36709159	(43664126)	+	(CAGAGG)n	Simple_repeat	1	39	(0)	1735117
14746	6.7	0.4	0.0	chr18	37100068	37101944	(43271341)	+	L1P1	LINE/L1	34	1917	(4238)	1735610
6370	14.5	12.4	0.5	chr18	40697698	40699076	(39674209)	+	THE1C-int	LTR/ERVL-MaLR	3	1580	(0)	1740360
26019	6.5	0.7	0.2	chr18	44927944	44934065	(35439220)	C	L1PA5	LINE/L1	(13)	6141	4	1746165
1742	15.1	5.7	1.7	chr18	46742268	46742618	(33630667)	+	L1MB8	LINE/L1	5203	5568	(814)	1749186
25114	6.0	0.5	0.1	chr18	46742620	46748236	(33625049)	+	L1PA6	LINE/L1	532	6154	(0)	1749189
297	30.4	9.1	7.1	chr18	54119783	54120051	(26253234)	+	LTR88c	LTR/Gypsy?	41	315	(547)	1760743
26345	6.2	0.3	0.2	chr18	70342942	70349081	(10024204)	C	L1PA5	LINE/L1	(0)	6154	13	1784438
3518	9.1	3.7	0.4	chr18	74549038	74549533	(5823752)	+	MER75	DNA/PiggyBac	1	513	(1)	1790029
8830	14.6	6.4	1.5	chr18	74549534	74550579	(5822706)	+	MSTA-int	LTR/ERVL-MaLR	473	1601	(50)	1790028
11897	9.7	0.5	0.0	chr18	74565278	74566850	(5806435)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	1790056
19	23.3	0.0	1.9	chr18	76822668	76822720	(3550565)	+	(GCCCGC)n	Simple_repeat	1	53	(0)	1792730
16	14.8	0.0	4.9	chr18	76822738	76822778	(3550507)	+	G-rich	Low_complexity	1	41	(0)	1792731
19	11.7	4.0	3.9	chr18	76822895	76822944	(3550341)	+	G-rich	Low_complexity	1	52	(0)	1792732
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
192	21.9	13.5	0.0	chr18	80174048	80174111	(199174)	+	MIRc	SINE/MIR	117	190	(78)	1796232
17	12.7	1.6	10.8	chr19	862479	862542	(57755074)	+	G-rich	Low_complexity	1	65	(0)	1797781
71	1.5	0.0	0.0	chr19	892875	892942	(57724674)	+	(GCCCCGC)n	Simple_repeat	1	68	(0)	1797831
918	5.5	0.0	0.0	chr19	1000001	1000109	(57617507)	C	AluSx3	SINE/Alu	(201)	110	2	1798053
20	18.5	0.0	0.0	chr19	1000449	1000491	(57617125)	+	G-rich	Low_complexity	1	43	(0)	1798054
11	17.5	0.0	5.6	chr19	1248446	1248481	(57369135)	+	G-rich	Low_complexity	1	36	(0)	1798463
19	12.8	0.0	0.0	chr19	1248491	1248524	(57369092)	+	(CCGC)n	Simple_repeat	1	34	(0)	1798464
12	22.4	1.9	5.7	chr19	1248809	1248860	(57368756)	+	(GCCCC)n	Simple_repeat	1	53	(0)	1798465
306	30.6	17.2	1.5	chr19	1304259	1304517	(57313099)	+	L2b	LINE/L2	3022	3329	(46)	1798528
191	30.4	5.1	0.0	chr19	1606258	1606313	(57011303)	+	L2b	LINE/L2	3123	3181	(194)	1799133
13	31.8	0.0	1.8	chr19	2841855	2841910	(55775706)	+	(CCCCG)n	Simple_repeat	1	56	(0)	1801762
2682	2.9	0.7	0.3	chr19	2900006	2900314	(55717302)	+	AluY	SINE/Alu	1	310	(1)	1801886
400	17.8	4.2	0.0	chr19	2921805	2921894	(55695722)	+	MER68-int	LTR/ERVL	674	767	(2223)	1801924
4553	22.0	9.7	1.4	chr19	2921893	2922575	(55695041)	+	MER68-int	LTR/ERVL	1542	2269	(721)	1801924
617	26.6	14.4	3.3	chr19	3545002	3545606	(55072010)	+	L2b	LINE/L2	2482	3190	(185)	1803498
17	15.1	7.5	1.8	chr19	4607297	4607349	(54010267)	+	(TGGCGC)n	Simple_repeat	1	57	(0)	1805992
421	24.5	2.8	2.8	chr19	4670677	4670819	(53946797)	+	L1MC4a	LINE/L1	7108	7250	(632)	1806159
57	5.1	0.0	0.0	chr19	6190791	6190852	(52426764)	+	(AC)n	Simple_repeat	1	62	(0)	1809651
731	17.2	0.0	0.0	chr19	9675436	9675551	(48942065)	+	FLAM_C	SINE/Alu	1	116	(27)	1817897
12	22.4	7.7	0.0	chr19	10416972	10417023	(48200593)	+	(GGCGAGG)n	Simple_repeat	1	56	(0)	1819689
756	25.3	7.3	2.7	chr19	11339831	11340053	(47277563)	+	MIR	SINE/MIR	5	238	(24)	1822091
1903	13.5	4.0	0.3	chr19	11340056	11340343	(47277273)	+	AluJb	SINE/Alu	1	299	(13)	1822092
2162	13.8	0.0	0.3	chr19	11695366	11695676	(46921940)	+	AluJb	SINE/Alu	1	310	(2)	1822953
27	0.0	0.0	0.0	chr19	12401542	12401567	(46216049)	+	(T)n	Simple_repeat	1	26	(0)	1824374
13	18.0	0.0	2.9	chr19	12867000	12867033	(45750583)	+	(GGTGG)n	Simple_repeat	1	34	(0)	1825412
12	4.3	8.3	0.0	chr19	12867092	12867115	(45750501)	+	(TTTA)n	Simple_repeat	1	26	(0)	1825413
877	15.6	0.7	0.7	chr19	13854420	13854560	(44763056)	C	AluSx	SINE/Alu	(171)	141	1	1827967
1678	18.3	0.3	2.7	chr19	13854561	13854721	(44762895)	C	AluJo	SINE/Alu	(18)	294	134	1827968
2041	4.7	8.2	0.0	chr19	13854722	13855007	(44762609)	C	AluY	SINE/Alu	(0)	311	1	1827969
28	23.7	4.8	5.2	chr19	14690058	14690206	(43927410)	+	(GCGCG)n	Simple_repeat	1	148	(0)	1830169
10652	10.8	4.3	0.2	chr19	15995048	15996562	(42621054)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	1832917
289	25.5	3.5	0.3	chr19	17074880	17074980	(41542636)	+	MIR3	SINE/MIR	83	199	(69)	1835436
233	27.2	13.5	4.4	chr19	17075046	17075226	(41542390)	C	MIRb	SINE/MIR	(36)	226	27	1835437
388	27.5	12.7	3.6	chr19	18168411	18168659	(40448957)	C	L2b	LINE/L2	(43)	3332	3058	1838266
196	15.6	0.0	0.0	chr19	18340441	18340472	(40277144)	C	MIR1_Amn	SINE/MIR	(76)	154	123	1838667
12	27.7	0.0	2.2	chr19	19687319	19687363	(38930253)	+	(CTCC)n	Simple_repeat	1	45	(0)	1841443
24718	5.8	0.7	0.1	chr19	19917951	19924055	(38693561)	C	L1PA5	LINE/L1	(0)	6154	11	1841831
2134	24.5	2.8	1.3	chr19	22350306	22352317	(36265299)	C	BSR/Beta	Satellite	(87)	2042	1	1845170
6091	10.8	0.6	0.2	chr19	23335046	23335952	(35281664)	C	L1P2	LINE/L1	(5271)	913	4	1846530
17321	9.2	0.4	1.1	chr19	23613436	23619660	(34997956)	+	L1PA5	LINE/L1	11	6150	(4)	1846929
16071	8.1	0.7	0.1	chr19	27600021	27603036	(31014580)	C	L1PA4	LINE/L1	(3042)	3104	69	1847830
2199	8.1	1.1	0.4	chr19	27995660	27995931	(30621685)	+	AluY	SINE/Alu	1	274	(37)	1848145
1844	16.2	6.4	3.8	chr19	27995932	27995973	(30621643)	+	MER4B	LTR/ERV1	483	547	(63)	1848144
1532	10.7	0.5	0.0	chr19	27995974	27996197	(30621419)	C	L1P1	LINE/L1	(5549)	606	382	1848146
531	10.6	3.4	1.2	chr19	27996199	27996284	(30621332)	+	MER4B	LTR/ERV1	523	610	(0)	1848144
25139	7.1	0.7	0.2	chr19	29132610	29138743	(29478873)	+	L1PA6	LINE/L1	4	6154	(0)	1849793
1609	16.4	1.8	1.1	chr19	29844021	29844294	(28773322)	C	AluJr	SINE/Alu	(6)	306	31	1850974
26	15.1	0.0	1.9	chr19	29844484	29844536	(28773080)	+	(GCCCC)n	Simple_repeat	1	53	(0)	1850975
12	17.4	0.0	8.7	chr19	29873737	29873782	(28743834)	+	(CCCCCG)n	Simple_repeat	1	46	(0)	1851044
237	33.8	0.0	0.0	chr19	29873898	29873971	(28743645)	+	MIR	SINE/MIR	109	182	(80)	1851045
2858	17.4	7.3	2.2	chr19	29953378	29954013	(28663603)	C	Looper	DNA/PiggyBac	(881)	676	6	1851220
186	21.7	0.0	13.2	chr19	30377142	30377194	(28240422)	+	L2b	LINE/L2	3241	3286	(89)	1851770
1121	28.6	3.6	3.1	chr19	33543074	33543488	(25074128)	C	MLT1K	LTR/ERVL-MaLR	(61)	534	118	1856915
313	26.0	6.5	1.7	chr19	33543664	33543778	(25073838)	C	L1MEg	LINE/L1	(4100)	2125	1980	1856916
393	26.3	14.3	3.8	chr19	34426836	34427096	(24190520)	C	L1ME4a	LINE/L1	(232)	5892	5600	1858620
1209	12.3	0.0	0.0	chr19	34427097	34427258	(24190358)	C	AluJb	SINE/Alu	(11)	301	140	1858621
14	31.3	1.1	5.2	chr19	34482451	34482545	(24135071)	+	(CCTGCCC)n	Simple_repeat	1	96	(0)	1858734
278	34.8	5.6	0.0	chr19	34734412	34734546	(23883070)	+	MIR	SINE/MIR	50	192	(70)	1859056
560	29.0	18.9	1.6	chr19	35170501	35170864	(23446752)	C	MER115	DNA/hAT-Tip100	(259)	434	3	1859864
284	28.1	6.3	1.1	chr19	35170906	35171047	(23446569)	+	Charlie9	DNA/hAT-Charlie	1	148	(113)	1859865
19	16.2	0.0	2.3	chr19	35269706	35269748	(23347868)	+	(GGCG)n	Simple_repeat	1	43	(0)	1860065
430	26.2	0.8	3.1	chr19	35397300	35397429	(23220187)	+	L1M5	LINE/L1	5387	5513	(681)	1860319
2114	11.1	2.4	0.0	chr19	35397497	35397785	(23219831)	+	AluSx1	SINE/Alu	1	296	(16)	1860320
2273	12.5	0.0	0.0	chr19	36131452	36131763	(22485853)	+	AluSx	SINE/Alu	1	312	(0)	1861940
2440	13.1	3.9	3.0	chr19	36131764	36132193	(22485423)	C	MER31A	LTR/ERV1	(40)	445	5	1861939
12739	0.5	0.0	2.1	chr19	36270447	36272042	(22345574)	+	SST1	Satellite/centr	1	1563	(0)	1862253
24	29.7	0.0	2.5	chr19	36272043	36272123	(22345493)	+	(GT)n	Simple_repeat	1	81	(0)	1862254
26	23.7	3.8	3.6	chr19	36272113	36272129	(22345487)	+	(CTGTCT)n	Simple_repeat	1	66	(44)	1862255
36	20.5	1.2	1.2	chr19	36272130	36272209	(22345407)	+	(TC)n	Simple_repeat	1	81	(0)	1862256
11383	1.6	0.0	2.0	chr19	36308415	36309981	(22307635)	+	SST1	Satellite/centr	1	1535	(28)	1862299
11	21.6	10.9	0.0	chr19	36528911	36528974	(22088642)	+	(TTGTGTGA)n	Simple_repeat	1	71	(0)	1862727
15	16.8	0.0	0.0	chr19	36528950	36528976	(22088640)	+	(GT)n	Simple_repeat	1	27	(0)	1862728
25	7.3	4.7	0.0	chr19	36572901	36572943	(22044673)	+	(AAAC)n	Simple_repeat	1	45	(0)	1862814
9455	15.4	5.5	0.2	chr19	39993099	39994662	(18622954)	+	MSTA-int	LTR/ERVL-MaLR	1	1651	(0)	1870079
492	25.5	20.9	0.5	chr19	40433498	40433706	(18183910)	C	L2a	LINE/L2	(338)	3081	2819	1871042
213	32.4	2.8	1.9	chr19	40433754	40433860	(18183756)	C	L2a	LINE/L2	(198)	3177	3070	1871042
15	14.7	0.0	0.0	chr19	40433948	40433977	(18183639)	+	(GGGA)n	Simple_repeat	1	30	(0)	1871050
224	35.2	0.0	0.0	chr19	40904958	40905028	(17712588)	C	L2b	LINE/L2	(61)	3314	3244	1872210
24606	7.4	1.1	0.1	chr19	40912708	40917997	(17699619)	+	L1PA5	LINE/L1	4	5331	(815)	1872231
16830	9.7	1.3	0.0	chr19	40968626	40971605	(17646011)	C	L1P2	LINE/L1	(3140)	3179	175	1872331
17306	8.4	0.5	0.5	chr19	41033057	41036044	(17581572)	+	L1P1	LINE/L1	174	3162	(3157)	1872465
27339	4.9	0.1	0.0	chr19	41486363	41492519	(17125097)	+	L1PA4	LINE/L1	5	6152	(3)	1873518
11623	9.1	1.0	2.9	chr19	41581871	41583480	(17034136)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	1873617
350	31.1	7.0	1.0	chr19	42113578	42113767	(16503849)	+	L2b	LINE/L2	3219	3423	(3)	1874605
521	10.7	1.1	2.6	chr19	42412608	42412723	(16204893)	+	MSR1	Satellite	1	114	(0)	1875228
12	20.1	7.5	1.8	chr19	43527303	43527355	(15090261)	+	G-rich	Low_complexity	1	57	(0)	1877018
1215	13.4	0.2	0.0	chr19	44410766	44412174	(14205442)	+	ACRO1	Satellite/acro	1	1411	(0)	1878697
193	27.3	0.0	0.0	chr19	45405400	45405443	(13212173)	+	MIR3	SINE/MIR	111	154	(54)	1881219
12	21.2	2.5	2.4	chr19	45730644	45730683	(12886933)	+	(CCACC)n	Simple_repeat	1	41	(0)	1882116
572	25.8	7.8	2.6	chr19	46389573	46389767	(12227849)	C	L1MC5	LINE/L1	(421)	8883	8678	1883530
12	29.1	0.0	6.9	chr19	46389807	46389878	(12227738)	+	(CCCTCC)n	Simple_repeat	1	72	(0)	1883533
18	21.3	3.2	3.1	chr19	46389909	46389971	(12227645)	+	(TCTCTG)n	Simple_repeat	1	65	(0)	1883534
378	32.1	9.9	6.5	chr19	47225656	47226058	(11391558)	+	L1ME3Cz	LINE/L1	566	997	(0)	1885593
26	0.0	0.0	0.0	chr19	47226328	47226352	(11391264)	+	(CCCTGG)n	Simple_repeat	1	25	(0)	1885597
1756	13.8	9.8	0.0	chr19	47955897	47956171	(10661445)	C	AluSx1	SINE/Alu	(7)	305	1	1887543
1062	18.2	0.0	4.2	chr19	47956179	47956370	(10661246)	C	AluJb	SINE/Alu	(22)	290	107	1887544
408	26.5	11.1	0.7	chr19	48506274	48506410	(10111206)	+	L2a	LINE/L2	3272	3424	(2)	1888895
1723	13.5	0.3	6.4	chr19	49486861	49487171	(9130445)	+	AluJo	SINE/Alu	1	292	(20)	1891207
4267	15.9	0.8	4.1	chr19	50135484	50135964	(8481652)	C	L1P4	LINE/L1	(2469)	3677	3219	1892740
1885	14.3	2.4	0.9	chr19	50135965	50136288	(8481328)	+	L1PB1	LINE/L1	5822	6150	(1)	1892741
4267	15.9	0.8	4.1	chr19	50136289	50136658	(8480958)	C	L1P4	LINE/L1	(2928)	3218	2854	1892740
1120	9.2	0.0	13.3	chr19	50136668	50136863	(8480753)	+	AluSx	SINE/Alu	137	306	(6)	1892742
323	25.0	10.1	2.4	chr19	50136865	50137073	(8480543)	C	L1MC4	LINE/L1	(5098)	1117	891	1892743
3706	4.8	1.9	5.2	chr19	52923622	52924121	(5693495)	+	LTR2B	LTR/ERV1	1	483	(0)	1898470
2383	10.4	0.0	1.3	chr19	53914720	53915035	(4702581)	+	AluSx	SINE/Alu	1	312	(0)	1900567
12	26.0	1.9	1.9	chr19	53915036	53915054	(4702562)	+	GA-rich	Low_complexity	35	52	(0)	1900568
756	8.0	1.4	1.6	chr19	53990321	53991215	(4626401)	+	MSR1	Satellite	1	893	(0)	1900753
22	5.9	0.0	2.7	chr19	53991573	53991655	(4625961)	+	(GAGGGTG)n	Simple_repeat	1	80	(0)	1900754
36	2.7	0.0	2.5	chr19	54017623	54017662	(4599954)	+	(TC)n	Simple_repeat	1	40	(0)	1900837
21	13.8	0.0	7.3	chr19	55605591	55605645	(3011971)	+	G-rich	Low_complexity	1	55	(0)	1904131
14	12.7	0.0	0.0	chr19	55605687	55605712	(3011904)	+	(CCT)n	Simple_repeat	1	26	(0)	1904132
232	30.1	5.2	0.4	chr19	55670357	55670454	(2947162)	C	L2a	LINE/L2	(18)	3408	3251	1904263
11	27.4	1.6	4.8	chr19	56567606	56567667	(2049949)	+	(GCGTGC)n	Simple_repeat	1	63	(0)	1906004
1841	20.3	0.0	0.6	chr19	58065184	58065494	(552122)	C	AluJb	SINE/Alu	(2)	310	2	1908804
1656	20.3	7.8	7.3	chr19	58065495	58065802	(551814)	C	MLT1D	LTR/ERVL-MaLR	(166)	339	8	1908801
25999	5.8	0.5	0.1	chr2	1382735	1388849	(240804680)	C	L1PA5	LINE/L1	(7)	6147	11	1912156
12091	9.2	0.2	0.1	chr2	3907777	3909353	(238284176)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	1915078
21	14.1	3.3	4.8	chr2	10043495	10043554	(232149975)	+	(CCGCC)n	Simple_repeat	1	62	(0)	1924068
11	11.7	7.3	4.5	chr2	10043901	10043941	(232149588)	+	G-rich	Low_complexity	1	44	(0)	1924069
4110	14.4	0.7	6.5	chr2	11072458	11073191	(231120338)	C	LTR8	LTR/ERV1	(0)	691	1	1925972
327	24.4	4.1	8.4	chr2	11073511	11073689	(231119840)	C	L1ME3G	LINE/L1	(193)	731	561	1925973
9484	12.0	6.4	4.2	chr2	16062738	16064281	(226129248)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	1933873
370	31.7	8.9	4.7	chr2	17853655	17853932	(224339597)	+	LTR78B	LTR/ERV1	997	1287	(9)	1936624
5723	11.9	2.4	0.6	chr2	17854151	17855283	(224338246)	C	L1PA16	LINE/L1	(3)	6163	5014	1936625
7595	12.0	2.6	1.4	chr2	17992925	17994032	(224199497)	+	THE1D-int	LTR/ERVL-MaLR	511	1631	(0)	1936824
3925	9.1	6.2	7.7	chr2	18632233	18632924	(223560605)	+	THE1B-int	LTR/ERVL-MaLR	1	681	(899)	1937739
14766	18.0	2.4	4.4	chr2	18632925	18634464	(223559065)	C	L1PA11	LINE/L1	(259)	7350	5920	1937740
26413	5.0	0.3	0.1	chr2	18692199	18698337	(223495192)	C	L1PA4	LINE/L1	(0)	6155	3	1937816
18273	6.7	0.9	0.1	chr2	20711414	20715894	(221477635)	+	L1P2	LINE/L1	1	4502	(1644)	1940763
9256	12.1	6.7	4.9	chr2	22581680	22583221	(219610308)	+	THE1C-int	LTR/ERVL-MaLR	9	1580	(0)	1943248
2217	7.7	0.0	6.4	chr2	25689006	25689318	(216504211)	+	AluSc5	SINE/Alu	2	294	(15)	1948385
2085	12.9	0.3	2.0	chr2	25689407	25689709	(216503820)	+	AluJr	SINE/Alu	1	298	(14)	1948386
33	11.7	0.0	0.0	chr2	26033106	26033153	(216160376)	+	(A)n	Simple_repeat	1	48	(0)	1949187
23	16.2	2.0	0.0	chr2	26033766	26033814	(216159715)	+	G-rich	Low_complexity	1	50	(0)	1949188
12	23.9	0.0	2.4	chr2	26173529	26173569	(216019960)	+	(ACAGGC)n	Simple_repeat	1	41	(0)	1949478
2390	8.0	0.0	1.3	chr2	26763784	26764094	(215429435)	+	AluSx1	SINE/Alu	1	307	(5)	1950562
14	22.1	2.4	0.0	chr2	27211802	27211843	(214981686)	+	(CCGCC)n	Simple_repeat	1	43	(0)	1951387
185	34.4	3.1	3.9	chr2	27264756	27264885	(214928644)	C	MIR1_Amn	SINE/MIR	(75)	155	27	1951464
12	23.0	0.0	4.5	chr2	28751965	28752008	(213441521)	+	G-rich	Low_complexity	1	44	(0)	1954159
14	14.2	3.2	0.0	chr2	28752047	28752077	(213441452)	+	(CGC)n	Simple_repeat	1	32	(0)	1954160
402	13.1	5.5	1.4	chr2	29830516	29830585	(212362944)	+	MER5A1	DNA/hAT-Charlie	1	73	(93)	1955910
1697	16.4	0.0	10.2	chr2	29830591	29830932	(212362597)	+	AluJr	SINE/Alu	5	311	(1)	1955911
12018	8.9	0.3	0.0	chr2	31748525	31750237	(210443292)	+	L1PA5	LINE/L1	1	1718	(4437)	1958836
25152	6.7	0.8	0.1	chr2	31795338	31801439	(210392090)	+	L1PA5	LINE/L1	12	6154	(0)	1958899
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
11271	9.9	1.1	2.1	chr2	33692328	33693920	(208499609)	C	THE1A-int	LTR/ERVL-MaLR	(2)	1578	1	1962392
17206	6.6	0.2	0.5	chr2	36312430	36316011	(205877518)	C	L1P2	LINE/L1	(2590)	3556	1	1965887
20355	10.1	2.3	0.6	chr2	37206656	37210771	(204982758)	+	L1PB1	LINE/L1	2653	6862	(5)	1967340
22912	6.9	0.6	0.2	chr2	37594198	37600327	(204593202)	C	L1PA6	LINE/L1	(16)	6138	4	1967983
24901	5.2	0.1	0.2	chr2	38004696	38010858	(204182671)	C	L1PA4	LINE/L1	(2)	6153	2	1968571
10352	10.1	3.2	6.1	chr2	39358935	39360563	(202832966)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	1971060
26065	6.2	0.3	0.1	chr2	39575019	39581152	(202612377)	C	L1PA5	LINE/L1	(0)	6154	11	1971444
13	5.2	0.0	0.0	chr2	41837023	41837042	(200356487)	+	(TGG)n	Simple_repeat	1	20	(0)	1974493
487	30.4	1.9	1.2	chr2	41837187	41837346	(200356183)	+	MER5A	DNA/hAT-Charlie	1	161	(28)	1974494
257	35.3	2.9	1.4	chr2	42896862	42896999	(199296530)	C	MIRb	SINE/MIR	(9)	259	120	1976506
17	4.9	0.0	0.0	chr2	46915807	46915865	(195277664)	+	(C)n	Simple_repeat	1	59	(0)	1983050
13	17.9	7.4	3.5	chr2	48314247	48314300	(193879229)	+	(GCC)n	Simple_repeat	1	58	(0)	1985746
16	8.5	4.9	4.7	chr2	48314620	48314660	(193878869)	+	G-rich	Low_complexity	1	43	(0)	1985747
14	23.3	0.0	2.4	chr2	48314663	48314704	(193878825)	+	(TGC)n	Simple_repeat	1	42	(0)	1985748
1990	14.6	0.9	2.0	chr2	48351478	48351819	(193841710)	C	MER1B	DNA/hAT-Charlie	(0)	339	2	1985817
24	12.3	2.3	0.0	chr2	48440801	48440844	(193752685)	+	(GGC)n	Simple_repeat	1	45	(0)	1985972
11669	9.6	0.4	0.1	chr2	48811641	48813216	(193380313)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	1986586
17288	6.7	0.9	0.1	chr2	53410924	53413210	(188780319)	+	L1PA5	LINE/L1	11	2318	(3828)	1992548
5110	16.5	4.8	1.5	chr2	53708469	53709414	(188484115)	+	MSTA-int	LTR/ERVL-MaLR	1	979	(672)	1993003
11247	10.7	1.5	0.9	chr2	54324648	54326267	(187867262)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	1994174
18	24.0	1.2	7.1	chr2	54724835	54724918	(187468611)	+	(CGG)n	Simple_repeat	1	85	(0)	1994740
24838	6.5	0.8	0.4	chr2	56421066	56427207	(185766322)	+	L1PA4	LINE/L1	4	6155	(0)	1997394
16532	7.2	0.1	0.0	chr2	56775876	56777993	(185415536)	C	L1P1	LINE/L1	(4033)	2122	4	1997815
13	18.5	2.6	2.5	chr2	58428270	58428308	(183765221)	+	GA-rich	Low_complexity	1	40	(0)	1999768
18112	6.1	0.2	0.0	chr2	60034874	60039411	(182154118)	+	L1PA4	LINE/L1	12	4558	(1588)	2001897
23324	7.0	0.4	0.4	chr2	60130177	60136340	(182057189)	C	L1PA5	LINE/L1	(0)	6154	4	2002011
10602	7.5	1.2	0.0	chr2	61021063	61022482	(181171047)	+	L1P2	LINE/L1	18	1455	(4729)	2003505
16231	7.2	1.4	1.2	chr2	61034338	61035701	(181157828)	+	L1PA6	LINE/L1	5	1372	(4812)	2003537
23967	6.3	0.6	0.1	chr2	62515521	62521655	(179671874)	C	L1PA5	LINE/L1	(1)	6153	3	2006636
23577	6.0	1.3	0.9	chr2	62580886	62586986	(179606543)	C	L1PA4	LINE/L1	(2)	6153	11	2006736
24274	6.8	0.6	1.8	chr2	63210477	63216721	(178976808)	+	L1PA5	LINE/L1	4	6151	(3)	2007599
24584	6.4	2.1	0.6	chr2	64891027	64897091	(177296438)	+	L1PA5	LINE/L1	4	6152	(2)	2010144
2364	10.5	0.0	0.0	chr2	65006215	65006519	(177187010)	+	AluSx1	SINE/Alu	6	310	(2)	2010381
1237	20.5	9.7	2.2	chr2	65006658	65006925	(177186604)	+	AluJr4	SINE/Alu	2	291	(21)	2010382
1208	7.9	17.4	0.5	chr2	65231758	65231948	(176961581)	C	MER30	DNA/hAT-Charlie	(0)	230	1	2010883
20633	7.1	0.7	0.1	chr2	66609646	66615764	(175577765)	C	L1PA6	LINE/L1	(4)	6150	1	2012978
10143	12.3	4.0	0.3	chr2	67349426	67350943	(174842586)	C	THE1C-int	LTR/ERVL-MaLR	(3)	1577	1	2013957
23881	6.7	0.9	0.1	chr2	68063791	68069896	(174123633)	+	L1PA5	LINE/L1	4	6153	(1)	2014983
211	30.6	3.9	4.8	chr2	70747310	70747335	(171446194)	C	L2c	LINE/L2	(128)	3247	3225	2019545
25034	6.2	1.1	0.3	chr2	70842199	70848320	(171345209)	+	L1PA6	LINE/L1	1	6150	(4)	2019700
15	11.7	0.0	0.0	chr2	72144857	72144884	(170048645)	+	(GCGGG)n	Simple_repeat	1	28	(0)	2021630
559	22.6	0.8	1.6	chr2	72172769	72172894	(170020635)	+	Zaphod3	DNA/hAT-Tip100	55	179	(2444)	2021677
2793	19.6	1.0	0.0	chr2	72386197	72386691	(169806838)	+	MST-int	LTR/ERVL-MaLR	417	916	(735)	2021961
23	23.1	1.1	6.5	chr2	73112883	73113011	(169080518)	+	(CCGCC)n	Simple_repeat	1	122	(0)	2023102
25033	3.9	0.4	1.1	chr2	73460455	73466651	(168726878)	+	L1PA4	LINE/L1	3	6152	(3)	2023763
24585	5.1	0.6	0.1	chr2	73538401	73544525	(168649004)	+	L1PA4	LINE/L1	4	6153	(2)	2023842
24246	7.8	1.8	0.1	chr2	77161908	77167963	(165025566)	+	L1PA5	LINE/L1	4	6154	(0)	2029264
15	27.0	2.6	3.9	chr2	79512709	79512784	(162680745)	+	(CGCCC)n	Simple_repeat	1	78	(0)	2032400
10116	12.8	4.0	2.4	chr2	83203586	83205187	(158988342)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	3	2037353
24522	6.2	0.3	0.0	chr2	84262380	84268496	(157925033)	+	L1PA5	LINE/L1	11	6146	(8)	2038754
11527	8.4	3.2	0.3	chr2	85881307	85882550	(156310979)	+	THE1A-int	LTR/ERVL-MaLR	1	1276	(304)	2041670
11061	10.6	3.6	0.1	chr2	85941860	85943377	(156250152)	C	THE1B-int	LTR/ERVL-MaLR	(6)	1574	1	2041792
23208	6.7	0.5	0.3	chr2	86663686	86669846	(155523683)	+	L1PA6	LINE/L1	1	6151	(3)	2043005
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
21	8.8	2.8	0.0	chr2	91478098	91478133	(150715396)	+	(CCG)n	Simple_repeat	1	37	(0)	2048369
26445	5.0	0.5	0.0	chr2	95252087	95258210	(146935319)	C	L1PA4	LINE/L1	(2)	6153	7	2050417
1333	19.6	12.4	1.1	chr2	95561539	95561803	(146631726)	C	AluSx3	SINE/Alu	(1)	310	12	2050875
10715	11.9	0.2	8.7	chr2	96437918	96439698	(145753831)	+	THE1D-int	LTR/ERVL-MaLR	3	1631	(0)	2052146
239	28.9	7.8	1.8	chr2	96637905	96638061	(145555468)	C	MIRc	SINE/MIR	(72)	196	27	2052487
21	23.3	1.2	5.9	chr2	96638090	96638178	(145555351)	+	(GGCCC)n	Simple_repeat	1	84	(0)	2052488
25	28.2	2.0	6.0	chr2	96760837	96760984	(145432545)	+	G-rich	Low_complexity	1	151	(0)	2052732
616	15.3	8.3	0.0	chr2	97664455	97664565	(144528964)	C	FLAM_A	SINE/Alu	(10)	132	12	2053940
7211	17.5	0.4	1.3	chr2	98077797	98079142	(144114387)	C	MSTA-int	LTR/ERVL-MaLR	(318)	1333	1	2054514
15261	9.5	2.6	1.6	chr2	99000539	99002862	(143190667)	+	L1P1	LINE/L1	11	2355	(3791)	2055763
16893	6.0	1.5	1.1	chr2	99497182	99499719	(142693810)	+	HERVIP10F-int	LTR/ERV1	2	2414	(5323)	2056553
26428	5.0	0.2	0.9	chr2	100151608	100157797	(142035732)	C	L1PA4	LINE/L1	(0)	6155	12	2057478
2174	8.2	3.6	0.7	chr2	100562348	100562641	(141630888)	C	AluSx1	SINE/Alu	(9)	303	1	2058109
24929	7.1	0.4	0.6	chr2	101455312	101460384	(140733145)	C	L1PA6	LINE/L1	(1090)	5056	1	2059613
10998	12.0	2.4	0.5	chr2	101926639	101928238	(140265291)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	2060361
24722	5.2	0.3	0.0	chr2	102324372	102330501	(139863028)	+	L1PA4	LINE/L1	7	6153	(2)	2060949
9495	12.7	5.3	1.1	chr2	102365046	102366475	(139827054)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	88	2060991
24653	6.4	0.3	0.1	chr2	103200566	103206694	(138986835)	+	L1PA4	LINE/L1	11	6152	(3)	2062025
317	40.1	3.2	5.5	chr2	104298461	104298716	(137894813)	C	MIRb	SINE/MIR	(8)	260	11	2063341
30	14.0	2.6	5.0	chr2	104853225	104853302	(137340227)	+	GA-rich	Low_complexity	1	80	(0)	2064063
25159	6.7	0.5	0.1	chr2	104953607	104959755	(137233774)	C	L1PA6	LINE/L1	(0)	6154	1	2064184
19	0.0	0.0	0.0	chr2	105397011	105397031	(136796498)	+	(T)n	Simple_repeat	1	21	(0)	2064880
2964	13.5	3.5	9.7	chr2	105536685	105537241	(136656288)	+	LTR26B	LTR/ERV1	1	521	(10)	2065101
302	26.3	2.6	0.0	chr2	105537478	105537553	(136655976)	+	LTR41B	LTR/ERVL	53	130	(628)	2065102
11820	8.8	0.4	0.4	chr2	110154377	110155955	(132037574)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2071816
17180	11.3	26.0	0.4	chr2	110190759	110191029	(132002500)	+	L1PA10	LINE/L1	6622	6964	(637)	2071861
26717	5.7	0.3	0.0	chr2	110191030	110196929	(131996600)	+	L1PA4	LINE/L1	2	5917	(238)	2071864
2109	19.9	5.3	8.4	chr2	111896853	111897223	(130296306)	+	LTR75B	LTR/ERVL	1	375	(233)	2074216
32	0.0	0.0	0.0	chr2	111897224	111897253	(130296276)	+	(TTAT)n	Simple_repeat	1	30	(0)	2074217
2109	19.9	5.3	8.4	chr2	111897254	111897451	(130296078)	+	LTR75B	LTR/ERVL	376	551	(57)	2074216
1926	31.3	6.2	5.3	chr2	112823915	112824338	(129369191)	+	L2a	LINE/L2	2793	3243	(183)	2075806
206	22.9	14.3	1.0	chr2	112824347	112824443	(129369086)	C	MIR3	SINE/MIR	(8)	200	89	2075809
10800	10.5	0.7	2.7	chr2	113054465	113056020	(129137509)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	56	2076145
14	10.1	6.2	0.0	chr2	113889918	113889949	(128303580)	+	G-rich	Low_complexity	1	34	(0)	2077575
17	11.7	0.0	8.9	chr2	113890006	113890050	(128303479)	+	GA-rich	Low_complexity	1	45	(0)	2077576
12	11.9	0.0	6.5	chr2	113890041	113890071	(128303458)	+	G-rich	Low_complexity	1	31	(0)	2077577
23155	7.8	1.7	0.3	chr2	115960074	115966152	(126227377)	C	L1PA6	LINE/L1	(7)	6147	4	2080504
8766	11.6	0.5	0.2	chr2	116801970	116803193	(125390336)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	354	2081497
10513	11.7	3.2	0.1	chr2	117445047	117446577	(124746952)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2082336
17098	7.9	0.4	0.0	chr2	117579237	117582415	(124611114)	+	L1P2	LINE/L1	1	3172	(2974)	2082484
17372	7.6	1.0	0.0	chr2	117923130	117923655	(124269874)	+	L1PA4	LINE/L1	1	537	(5618)	2082922
30	0.0	0.0	0.0	chr2	117923656	117923683	(124269846)	+	(GCCT)n	Simple_repeat	1	28	(0)	2082923
26330	5.3	0.6	0.1	chr2	117923684	117929272	(124264257)	+	L1PA4	LINE/L1	538	6154	(1)	2082922
10277	11.4	1.6	8.3	chr2	118744076	118745771	(123447758)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2084192
17937	6.4	0.2	0.3	chr2	119001634	119004483	(123189046)	C	L1P1	LINE/L1	(3293)	2853	7	2084537
1259	24.8	1.7	3.3	chr2	119852196	119852499	(122341030)	+	LTR10B2	LTR/ERV1	205	503	(0)	2086066
2461	19.7	9.3	2.0	chr2	119852519	119852841	(122340688)	C	L1MDa	LINE/L1	(2866)	3671	3308	2086064
25096	6.7	1.3	1.1	chr2	120045673	120051818	(122141711)	C	L1PA5	LINE/L1	(5)	6149	4	2086374
13	21.3	1.9	5.5	chr2	120252985	120253038	(121940491)	+	G-rich	Low_complexity	1	55	(0)	2086660
25672	5.7	1.1	0.1	chr2	122550745	122556816	(119636713)	+	L1PA5	LINE/L1	11	6149	(5)	2090581
60	0.0	0.0	0.0	chr2	126663951	126664001	(115529528)	+	(TC)n	Simple_repeat	1	51	(0)	2096203
36645	7.8	1.2	0.1	chr2	127370373	127375395	(114818134)	+	HERVK22-int	LTR/ERVK	1	5078	(1759)	2097328
23	15.5	3.9	0.0	chr2	127388158	127388208	(114805321)	+	(CCCGGC)n	Simple_repeat	1	53	(0)	2097358
578	19.6	10.3	4.5	chr2	127438762	127438916	(114754613)	+	MamTip1	DNA/hAT-Tip100	103	267	(0)	2097449
10428	14.3	2.5	0.1	chr2	127690008	127691599	(114501930)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	2097820
26013	6.3	0.4	0.1	chr2	128943308	128949431	(113244098)	C	L1PA5	LINE/L1	(0)	6154	11	2099884
1127	11.6	0.3	0.0	chr2	132286523	132287784	(109905745)	C	ACRO1	Satellite/acro	(55)	1265	1	2104358
7559	8.5	0.4	0.0	chr2	133852436	133853402	(108340127)	+	THE1B-int	LTR/ERVL-MaLR	1	971	(609)	2106556
26764	5.1	0.1	0.0	chr2	134042780	134048904	(108144625)	+	L1PA4	LINE/L1	26	6155	(0)	2106848
25626	6.8	0.8	0.1	chr2	134746515	134752631	(107440898)	C	L1PA5	LINE/L1	(4)	6150	4	2107856
13536	7.9	0.2	0.1	chr2	135402976	135404882	(106788647)	+	L1P1	LINE/L1	9	1894	(4261)	2108956
11598	8.8	1.8	0.0	chr2	135452356	135453904	(106739625)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	4	2109026
13	14.8	8.5	2.0	chr2	135985449	135985495	(106208034)	+	(CTGGACA)n	Simple_repeat	1	51	(0)	2109962
24739	6.7	0.8	0.1	chr2	136468985	136474822	(105718707)	+	L1PA6	LINE/L1	292	6152	(2)	2110753
25287	6.7	0.3	0.4	chr2	137554561	137560715	(104632814)	+	L1PA5	LINE/L1	2	6145	(9)	2112241
9099	17.8	1.1	1.5	chr2	139593666	139595302	(102598227)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	2115023
10960	12.3	2.6	0.3	chr2	142309853	142311445	(99882084)	C	THE1D-int	LTR/ERVL-MaLR	(1)	1630	1	2118613
25319	7.2	0.5	0.1	chr2	144104122	144108357	(98085172)	+	L1PA5	LINE/L1	1	4242	(1904)	2120941
23235	8.0	1.3	0.1	chr2	145782396	145788484	(96405045)	+	L1PA6	LINE/L1	1	6147	(7)	2123107
25633	5.4	0.7	0.4	chr2	146788404	146794539	(95398990)	+	L1PA4	LINE/L1	4	6155	(0)	2124347
24942	4.5	0.5	0.0	chr2	147766523	147772633	(94420896)	+	L1PA4	LINE/L1	1	6144	(11)	2125693
25440	5.6	0.5	0.1	chr2	149637881	149643991	(92549538)	C	L1PA4	LINE/L1	(0)	6155	14	2128349
607	20.4	3.7	0.6	chr2	152200345	152200502	(89993027)	+	Charlie1a	DNA/hAT-Charlie	1293	1455	(0)	2132030
1281	21.9	7.0	7.0	chr2	152200586	152201041	(89992488)	+	LTR16A1	LTR/ERVL	1	456	(0)	2132031
18	16.8	0.0	6.1	chr2	152335084	152335133	(89858396)	+	G-rich	Low_complexity	1	46	(0)	2132279
13	14.3	2.3	6.7	chr2	152335727	152335770	(89857759)	+	G-rich	Low_complexity	1	45	(0)	2132280
12	22.8	1.7	6.8	chr2	153478574	153478631	(88714898)	+	G-rich	Low_complexity	1	59	(0)	2133770
25291	6.6	0.9	0.3	chr2	156370263	156376389	(85817140)	C	L1PA5	LINE/L1	(1)	6153	4	2137340
9434	11.7	6.9	4.2	chr2	157361127	157362661	(84830868)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	2138651
12	4.7	4.5	0.0	chr2	157839070	157839091	(84354438)	+	(TTTA)n	Simple_repeat	1	23	(0)	2139263
582	25.4	1.8	5.7	chr2	158953753	158953927	(83239602)	C	MIR	SINE/MIR	(54)	208	41	2140880
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
619	18.6	0.5	0.0	chr2	161281902	161282139	(80911390)	+	ACRO1	Satellite/acro	1	239	(5)	2144211
10150	10.8	8.6	2.8	chr2	162078240	162079725	(80113804)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2145205
8615	18.2	2.2	4.3	chr2	163306024	163307709	(78885820)	+	MSTA-int	LTR/ERVL-MaLR	1	1651	(0)	2146777
484	12.1	10.8	1.1	chr2	165671341	165671432	(76522097)	C	THE1B	LTR/ERVL-MaLR	(51)	313	212	2149985
4582	11.5	5.3	6.5	chr2	165671437	165672264	(76521265)	C	THE1B-int	LTR/ERVL-MaLR	(763)	817	1	2149985
11328	9.4	0.6	3.2	chr2	167267723	167269344	(74924185)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2151998
22953	8.8	1.9	0.4	chr2	168383854	168388529	(73805000)	+	L1PB1	LINE/L1	1392	6149	(718)	2153482
9014	14.0	2.0	9.8	chr2	168604911	168606680	(73586849)	+	MSTA-int	LTR/ERVL-MaLR	1	1629	(2)	2153811
24504	5.0	0.7	0.0	chr2	169399206	169405299	(72788230)	+	L1PA4	LINE/L1	13	6154	(1)	2154903
25538	6.4	0.8	0.1	chr2	170622574	170628671	(71564858)	C	L1PA5	LINE/L1	(1)	6153	11	2156940
23952	6.7	0.8	0.4	chr2	171349853	171356109	(70837420)	C	L1PA5	LINE/L1	(2)	6298	4	2158308
26663	5.2	0.4	0.0	chr2	171641286	171647419	(70546110)	C	L1PA4	LINE/L1	(0)	6155	2	2158809
2564	9.6	0.0	0.3	chr2	171647434	171647745	(70545784)	C	AluY	SINE/Alu	(0)	311	1	2158810
25728	6.7	1.3	0.2	chr2	172648380	172653322	(69540207)	+	L1PA6	LINE/L1	4	4992	(1154)	2160476
10001	8.5	6.2	0.5	chr2	172802600	172804094	(69389435)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2160717
10399	10.6	1.7	6.3	chr2	173888664	173890320	(68303209)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2162335
12301	9.3	0.8	0.9	chr2	174363899	174365479	(67828050)	C	THE1B-int	LTR/ERVL-MaLR	(2)	1578	1	2163136
24643	6.4	0.7	0.1	chr2	175957589	175963710	(66229819)	+	L1PA3	LINE/L1	5	6151	(4)	2165454
23869	7.2	1.0	0.3	chr2	176305924	176312032	(65881497)	C	L1PA6	LINE/L1	(10)	6317	181	2165934
683	28.2	4.9	4.1	chr2	177346526	177346769	(64846760)	+	MIRb	SINE/MIR	22	267	(1)	2167520
238	33.8	2.7	0.0	chr2	177346774	177346844	(64846685)	C	MIR3	SINE/MIR	(110)	98	26	2167521
23548	7.4	1.1	0.3	chr2	179212024	179218140	(62975389)	+	L1PA6	LINE/L1	174	6325	(2)	2169849
25173	6.4	0.5	0.8	chr2	179751937	179758099	(62435430)	C	L1PA5	LINE/L1	(1)	6153	12	2170594
24805	11.1	2.3	1.7	chr2	180526724	180532728	(61660801)	C	L1PA5	LINE/L1	(6)	6148	4	2171571
9822	11.5	3.2	4.4	chr2	180857018	180858616	(61334913)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	2171993
21154	14.4	2.2	1.1	chr2	182008531	182015122	(60178407)	C	L1MA3	LINE/L1	(0)	7710	1051	2173416
10979	10.5	2.5	0.2	chr2	182375153	182376695	(59816834)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2173871
24285	6.3	0.5	0.1	chr2	182686555	182692673	(59500856)	+	L1PA5	LINE/L1	11	6146	(8)	2174338
14	30.1	1.6	1.6	chr2	182716123	182716185	(59477344)	+	(CGCCAC)n	Simple_repeat	1	64	(0)	2174385
12	19.7	4.7	2.2	chr2	183037942	183037984	(59155545)	+	(CCCGC)n	Simple_repeat	1	45	(0)	2174822
19	23.7	2.5	4.8	chr2	183038303	183038383	(59155146)	+	(CAGCCCC)n	Simple_repeat	1	83	(0)	2174823
26	0.0	0.0	0.0	chr2	183038418	183038442	(59155087)	+	(GGC)n	Simple_repeat	1	25	(0)	2174824
16	15.2	2.0	6.0	chr2	183038554	183038602	(59154927)	+	(GGCCCT)n	Simple_repeat	1	50	(0)	2174825
18630	17.6	1.5	1.4	chr2	186309666	186312990	(55880539)	+	L1MA1	LINE/L1	19	3347	(4218)	2178887
749	7.1	0.0	0.0	chr2	186312993	186313090	(55880439)	+	L1PA4	LINE/L1	1	98	(6057)	2178888
25315	5.6	0.4	0.6	chr2	186313076	186318950	(55874579)	+	L1PA4	LINE/L1	297	6153	(2)	2178888
2660	13.3	9.7	1.8	chr2	188446872	188447445	(53746084)	C	MER4B	LTR/ERV1	(0)	900	10	2181665
25229	6.1	0.3	0.2	chr2	189319191	189325324	(52868205)	+	L1PA5	LINE/L1	12	6150	(4)	2182687
24706	6.3	0.9	0.1	chr2	189430380	189436165	(52757364)	+	L1PA5	LINE/L1	161	5980	(174)	2182821
23428	6.2	0.6	0.3	chr2	189711624	189714664	(52478865)	+	L1PA6	LINE/L1	1	3039	(3107)	2183254
9839	16.1	1.0	0.7	chr2	189942487	189944131	(52249398)	+	MSTA-int	LTR/ERVL-MaLR	1	1650	(1)	2183614
10370	10.6	3.9	3.5	chr2	190139784	190141357	(52052172)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	2183907
24832	4.7	0.8	0.0	chr2	190471105	190477209	(51716320)	+	L1PA4	LINE/L1	1	6147	(8)	2184428
22590	9.7	2.2	2.0	chr2	190492655	190497062	(51696467)	+	L1PB1	LINE/L1	2498	6864	(3)	2184448
18087	6.8	0.3	0.0	chr2	191160585	191164944	(51028585)	+	L1P2	LINE/L1	14	4369	(1777)	2185444
10296	14.0	2.0	0.2	chr2	193130880	193132481	(49061048)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	2188054
21929	7.4	0.7	0.3	chr2	193830869	193837004	(48356525)	C	L1PA5	LINE/L1	(0)	6154	7	2188929
954	15.9	1.6	1.4	chr2	194638916	194639123	(47554406)	+	L1M2	LINE/L1	4074	4278	(1862)	2189904
23732	7.2	0.6	0.1	chr2	194639130	194644911	(47548618)	+	L1PA6	LINE/L1	357	6153	(1)	2189907
20032	6.8	1.2	0.1	chr2	195265115	195269845	(46923684)	C	L1PA6	LINE/L1	(1385)	4761	1	2190668
9747	11.4	3.7	5.3	chr2	198156854	198158461	(44035068)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	2195120
10909	12.6	1.2	0.1	chr2	198984831	198986441	(43207088)	C	MSTA-int	LTR/ERVL-MaLR	(2)	1629	2	2196263
23310	7.1	0.8	0.1	chr2	199239609	199245731	(42947798)	C	L1PA6	LINE/L1	(1)	6326	175	2196579
615	28.6	19.5	1.2	chr2	199542030	199542355	(42651174)	+	L2b	LINE/L2	2973	3372	(3)	2196990
9447	10.7	8.9	0.5	chr2	199916382	199917828	(42275701)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	2197532
25960	6.6	0.7	0.3	chr2	201299946	201306098	(40887431)	+	L1PA5	LINE/L1	178	6327	(0)	2199901
12	20.8	4.3	2.1	chr2	203534996	203535041	(38658488)	+	(GGAGGCG)n	Simple_repeat	1	48	(0)	2204167
46	0.0	0.0	0.0	chr2	203535259	203535300	(38658229)	+	(TGAC)n	Simple_repeat	1	42	(0)	2204168
33	12.7	1.6	1.6	chr2	203535304	203535365	(38658164)	+	(GGC)n	Simple_repeat	1	63	(0)	2204169
31	25.4	4.6	2.2	chr2	203535450	203535580	(38657949)	+	(CCGCCCG)n	Simple_repeat	1	137	(0)	2204170
15	14.3	0.0	3.0	chr2	204545554	204545586	(37647943)	+	(CGC)n	Simple_repeat	1	33	(0)	2205785
29	7.2	2.3	0.0	chr2	204545612	204545655	(37647874)	+	(GCCAGG)n	Simple_repeat	1	45	(0)	2205786
326	23.5	13.1	4.0	chr2	204545685	204545808	(37647721)	C	L1MDb	LINE/L1	(5718)	691	555	2205787
10136	11.3	2.7	3.0	chr2	206348685	206350202	(35843327)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	117	2208481
378	23.4	3.6	0.9	chr2	207243047	207243154	(34950375)	+	L2a	LINE/L2	3311	3421	(5)	2209728
2689	12.4	2.9	0.0	chr2	208514633	208515034	(33678495)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1218	2211964
5443	18.9	2.6	0.3	chr2	208515019	208516002	(33677527)	C	MSTA-int	LTR/ERVL-MaLR	(644)	1007	1	2211964
26235	5.0	0.5	0.2	chr2	210505421	210511544	(31681985)	+	L1PA4	LINE/L1	18	6154	(1)	2214443
413	29.5	8.7	2.1	chr2	211348945	211349138	(30844391)	+	MamGypLTR1b	LTR/Gypsy	1	208	(574)	2215476
254	37.0	11.1	1.0	chr2	211349293	211349486	(30844043)	+	MamGypLTR1b	LTR/Gypsy	432	647	(137)	2215476
24922	7.3	0.3	0.7	chr2	212054825	212060959	(30132570)	+	L1PA5	LINE/L1	11	6141	(13)	2216429
7325	19.6	11.4	2.8	chr2	214034379	214035977	(28157552)	C	MER52A	LTR/ERV1	(0)	1755	3	2219045
4954	24.4	8.0	3.1	chr2	214035978	214037009	(28156520)	C	L1MC4	LINE/L1	(808)	7234	6115	2219044
440	26.4	7.5	8.0	chr2	215829902	215830288	(26363241)	+	Tigger16a	DNA/TcMar-Tigger	565	949	(8)	2221693
259	31.5	7.7	2.9	chr2	216337877	216338085	(25855444)	C	L2c	LINE/L2	(44)	3343	3124	2222554
272	32.4	1.4	5.4	chr2	216338099	216338245	(25855284)	C	MIRb	SINE/MIR	(31)	237	97	2222555
2778	20.8	3.9	1.0	chr2	217971068	217971688	(24221841)	C	L1ME1	LINE/L1	(1)	6178	5539	2225258
591	19.7	1.5	4.3	chr2	217971699	217971836	(24221693)	+	MER5B	DNA/hAT-Charlie	45	178	(0)	2225259
789	29.9	2.3	1.2	chr2	217972057	217972310	(24221219)	C	MIR	SINE/MIR	(3)	259	3	2225260
13	25.0	5.3	3.8	chr2	218292381	218292456	(23901073)	+	(GCCCCG)n	Simple_repeat	1	80	(0)	2225782
13	15.9	0.0	0.0	chr2	218292519	218292546	(23900983)	+	G-rich	Low_complexity	1	28	(0)	2225783
25	16.1	0.0	0.0	chr2	220187475	220187516	(22006013)	+	(T)n	Simple_repeat	1	42	(0)	2229166
10121	11.8	3.1	3.8	chr2	220925551	220927139	(21266390)	C	THE1B-int	LTR/ERVL-MaLR	(2)	1578	1	2230272
9562	14.0	4.0	0.5	chr2	221071074	221072596	(21120933)	C	THE1C-int	LTR/ERVL-MaLR	(1)	1579	1	2230485
9026	10.8	0.7	0.0	chr2	221723668	221724904	(20468625)	+	THE1B-int	LTR/ERVL-MaLR	1	1246	(334)	2231516
23966	6.2	0.4	0.2	chr2	222584378	222590526	(19603003)	+	L1PA5	LINE/L1	6	6154	(0)	2232815
205	28.1	2.4	2.4	chr2	222655712	222655795	(19537734)	+	L2a	LINE/L2	3341	3424	(2)	2232929
17531	8.1	0.5	0.6	chr2	223256752	223259553	(18933976)	C	L1P2	LINE/L1	(3364)	2955	176	2233965
10810	15.0	1.8	0.3	chr2	224344784	224346390	(17847139)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	2235766
7119	9.2	0.3	0.0	chr2	224757466	224758384	(17435145)	+	THE1B-int	LTR/ERVL-MaLR	1	922	(658)	2236535
3257	21.0	3.6	1.9	chr2	224758394	224759067	(17434462)	C	L1M2	LINE/L1	(6162)	687	2	2236536
1299	21.4	7.3	2.3	chr2	225279346	225279655	(16913874)	+	MLT1A0	LTR/ERVL-MaLR	1	327	(38)	2237264
582	25.8	9.4	0.6	chr2	225279701	225279864	(16913665)	C	MER63A	DNA/hAT-Blackjack	(0)	210	31	2237265
23745	7.2	0.3	0.7	chr2	227544419	227546619	(14646910)	C	L1PA5	LINE/L1	(3978)	2206	5	2240682
2316	9.5	0.0	0.3	chr2	227657848	227658142	(14535387)	+	AluSg	SINE/Alu	1	294	(16)	2240857
503	19.7	6.4	8.7	chr2	227658181	227658341	(14535188)	C	MER5A	DNA/hAT-Charlie	(32)	157	1	2240858
337	23.9	2.1	0.0	chr2	231848548	231848637	(10344892)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247744
371	22.8	2.1	0.0	chr2	231848638	231848727	(10344802)	+	MER20	DNA/hAT-Charlie	128	219	(0)	2247744
361	22.8	2.1	0.0	chr2	231848765	231848856	(10344673)	+	MER20	DNA/hAT-Charlie	126	219	(0)	2247745
343	24.2	2.1	0.0	chr2	231848894	231848984	(10344545)	+	MER20	DNA/hAT-Charlie	126	218	(1)	2247746
10503	11.3	5.1	0.3	chr2	234696615	234698118	(7495411)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2252388
11658	11.6	0.9	0.1	chr2	236834904	236836511	(5357018)	C	THE1D-int	LTR/ERVL-MaLR	(11)	1620	1	2255568
24586	6.4	1.1	0.1	chr2	237843470	237849565	(4343964)	C	L1PA5	LINE/L1	(5)	6149	4	2256947
10701	13.3	2.9	0.3	chr2	238530744	238532330	(3661199)	+	MSTA-int	LTR/ERVL-MaLR	3	1631	(0)	2257942
3478	25.3	7.3	0.6	chr2	239895462	239896399	(2297130)	C	MER45B	DNA/hAT-Tip100	(31)	1009	5	2259443
1055	28.4	11.6	2.2	chr2	239896413	239896909	(2296620)	+	L1MC5a	LINE/L1	2176	2725	(52)	2259444
11015	12.0	0.4	0.0	chr2	240262022	240263645	(1929884)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	2259866
706	27.0	15.9	3.2	chr2	241309584	241309988	(883541)	+	HAL1	LINE/L1	329	794	(1713)	2260958
1657	25.2	12.7	9.0	chr2	241310119	241310294	(883235)	+	HAL1	LINE/L1	962	1145	(1362)	2260958
23	8.9	0.0	0.0	chr20	372123	372158	(64072009)	+	(AAGG)n	Simple_repeat	1	36	(0)	2262785
4281	26.2	2.7	2.0	chr20	1711287	1713496	(62730671)	+	L1PBa	LINE/L1	56	1697	(5219)	2265465
2017	12.5	1.4	0.0	chr20	2231287	2231567	(62212600)	C	AluSz	SINE/Alu	(22)	290	6	2266538
24231	6.6	0.6	0.5	chr20	2264448	2270606	(62173561)	+	L1PA6	LINE/L1	5	6149	(5)	2266615
350	26.0	13.4	3.9	chr20	2417033	2417160	(62027007)	C	MER102a	DNA/hAT-Charlie	(184)	146	9	2266921
246	16.7	0.0	0.0	chr20	2417719	2417760	(62026407)	C	MIRc	SINE/MIR	(115)	153	112	2266926
200	21.1	0.0	0.0	chr20	2417727	2417764	(62026403)	C	MIR3	SINE/MIR	(66)	142	105	2266927
13	24.0	1.4	8.0	chr20	4249526	4249599	(60194568)	+	(CCCTCC)n	Simple_repeat	1	75	(0)	2270439
14203	7.7	0.9	0.1	chr20	4500001	4501964	(59942203)	C	L1P2	LINE/L1	(4206)	1978	1	2270834
790	18.3	2.1	1.4	chr20	5030190	5030331	(59413836)	+	FRAM	SINE/Alu	26	168	(8)	2271813
924	26.8	1.5	1.8	chr20	5030580	5030853	(59413314)	+	LTR16C	LTR/ERVL	209	481	(8)	2271814
285	32.2	8.3	2.7	chr20	8712439	8712585	(55731582)	C	MER5A	DNA/hAT-Charlie	(22)	167	12	2277696
194	35.1	1.3	1.3	chr20	8712629	8712706	(55731461)	+	MIR	SINE/MIR	60	137	(125)	2277697
25697	5.9	0.5	0.2	chr20	12491625	12497742	(51946425)	+	L1PA5	LINE/L1	11	6148	(6)	2283510
26208	4.7	0.9	0.1	chr20	18755271	18761370	(45682797)	C	L1PA4	LINE/L1	(0)	6155	2	2293189
26075	6.4	0.2	0.2	chr20	18861217	18867349	(45576818)	C	L1PA5	LINE/L1	(8)	6214	79	2293364
412	16.5	0.0	0.0	chr20	18867353	18867431	(45576736)	C	L1PB1	LINE/L1	(114)	6753	6675	2293365
23371	7.1	0.2	0.3	chr20	19161646	19167812	(45276355)	C	L1PA5	LINE/L1	(3)	6151	4	2293750
24593	7.7	1.1	0.7	chr20	21853446	21856521	(42587646)	+	L1PA6	LINE/L1	181	3252	(3067)	2297696
24417	7.4	0.6	0.2	chr20	22194132	22200273	(42243894)	+	L1PA6	LINE/L1	174	6327	(0)	2298081
7241	16.8	3.8	1.0	chr20	22850027	22851845	(41592322)	+	L1MA9	LINE/L1	3969	5842	(470)	2298943
24335	10.5	1.7	1.8	chr20	22851813	22857781	(41586386)	+	L1MA9	LINE/L1	407	6342	(17)	2298944
17751	8.2	0.5	0.0	chr20	23183137	23186048	(41258119)	C	L1PA6	LINE/L1	(3237)	2909	1	2299338
497	22.1	10.3	0.0	chr20	23235581	23235711	(41208456)	+	MamGypLTR3	LTR/Gypsy	593	738	(156)	2299412
24210	7.4	0.9	0.5	chr20	23615338	23621466	(40822701)	C	L1PA6	LINE/L1	(8)	6146	7	2299928
18331	7.3	5.0	0.3	chr20	25260506	25265239	(39178928)	+	L1P2	LINE/L1	4	4953	(1193)	2301918
18	25.3	1.3	5.1	chr20	25390705	25390781	(39053386)	+	(CCG)n	Simple_repeat	1	78	(0)	2302097
15	29.0	0.0	0.0	chr20	25390896	25390945	(39053222)	+	(CCCCCG)n	Simple_repeat	1	50	(0)	2302098
2308	29.1	5.8	6.1	chr20	25867794	25869361	(38574806)	C	SST1	Satellite/centr	(1)	1562	1	2302878
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
19042	6.5	0.3	0.0	chr20	30831835	30836469	(33607698)	C	L1P1	LINE/L1	(1491)	4655	7	2305493
1030	9.4	0.8	0.0	chr20	30866424	30866600	(33577567)	+	BSR/Beta	Satellite	1	178	(0)	2305529
183	0.0	6.7	0.0	chr20	32277391	32277418	(32166749)	C	MIR1_Amn	SINE/MIR	(85)	145	116	2308086
46	2.2	0.0	0.0	chr20	32277699	32277744	(32166423)	+	(CGC)n	Simple_repeat	1	46	(0)	2308087
19	17.7	0.0	2.5	chr20	32358330	32358369	(32085798)	+	(CA)n	Simple_repeat	1	40	(0)	2308298
237	27.8	2.0	5.8	chr20	41028073	41028175	(23415992)	+	L2a	LINE/L2	3323	3421	(5)	2326931
569	27.5	17.0	4.2	chr20	41717085	41717503	(22726664)	C	L2a	LINE/L2	(30)	3396	2910	2327978
489	31.1	6.5	0.8	chr20	41717630	41717964	(22726203)	+	L2c	LINE/L2	3023	3378	(9)	2327980
465	33.0	9.4	3.4	chr20	43448743	43449093	(20995074)	+	L3	LINE/CR1	3715	4088	(11)	2331187
1617	10.3	0.0	0.0	chr20	43449325	43449528	(20994639)	+	AluSg	SINE/Alu	24	227	(83)	2331191
12	21.6	4.6	7.7	chr20	46894677	46894763	(17549404)	+	(CCAGCGC)n	Simple_repeat	1	91	(0)	2338725
21	17.6	3.3	3.2	chr20	46894833	46894893	(17549274)	+	(CGGCAG)n	Simple_repeat	1	63	(0)	2338726
19	9.0	0.0	12.9	chr20	46894899	46894960	(17549207)	+	(GCCC)n	Simple_repeat	1	62	(0)	2338727
25036	6.2	0.5	0.2	chr20	48976984	48983133	(15461034)	C	L1PA6	LINE/L1	(6)	6148	1	2343337
311	23.1	9.7	1.5	chr20	49361833	49361964	(15082203)	+	Charlie18a	DNA/hAT-Charlie	131	274	(68)	2344239
976	20.4	0.6	0.0	chr20	49361984	49362159	(15082008)	+	AluJo	SINE/Alu	124	300	(12)	2344240
254	10.9	8.0	0.0	chr20	49362160	49362205	(15081962)	+	Charlie18a	DNA/hAT-Charlie	291	340	(2)	2344241
2675	17.9	8.6	0.8	chr20	49362233	49362755	(15081412)	+	MLT1F1	LTR/ERVL-MaLR	2	569	(0)	2344242
13	25.0	0.0	0.0	chr20	49957787	49957824	(14486343)	+	(GGCCCA)n	Simple_repeat	1	38	(0)	2345701
21	8.8	5.6	0.0	chr20	50496861	50496896	(13947271)	+	(CT)n	Simple_repeat	1	38	(0)	2347104
354	27.3	0.0	2.2	chr20	50496998	50497087	(13947080)	C	L2b	LINE/L2	(0)	3375	3288	2347105
2162	15.6	0.0	0.9	chr20	51894569	51894910	(12549257)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	2350196
752	18.1	4.6	0.0	chr20	51894938	51895081	(12549086)	+	MLT1A1	LTR/ERVL-MaLR	4	154	(254)	2350197
12	13.2	5.7	2.7	chr20	56358737	56358771	(8085396)	+	G-rich	Low_complexity	1	37	(0)	2358874
18	9.8	4.1	5.9	chr20	56359085	56359133	(8085034)	+	(GCGCCCT)n	Simple_repeat	1	51	(0)	2358875
203	31.8	11.1	10.3	chr20	57966529	57966742	(6477425)	+	L2b	LINE/L2	3157	3372	(3)	2362139
183	15.9	8.3	0.0	chr20	63291209	63291252	(1152915)	C	L2b	LINE/L2	(74)	3301	3254	2369456
2142	11.8	0.0	0.0	chr20	63291561	63291847	(1152320)	+	AluSq2	SINE/Alu	5	291	(22)	2369457
591	14.5	3.2	0.0	chr20	63442547	63443618	(1000549)	+	(CATCAC)n	Simple_repeat	1	1106	(0)	2369578
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
40632	0.2	1.2	0.8	chr21	8214773	8218941	(38491042)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373279
797	22.4	0.5	0.1	chr21	8229975	8230765	(38479218)	+	(TCTC)n	Simple_repeat	2	795	(0)	2373327
446	20.9	0.1	6.5	chr21	8230776	8230919	(38479064)	+	MER39B	LTR/ERV1	298	454	(253)	2373328
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
37669	0.4	1.2	0.8	chr21	8397807	8401980	(38308003)	+	LSU-rRNA_Hsa	rRNA	878	5034	(1)	2373509
24	15.5	7.0	0.0	chr21	8401981	8402037	(38307946)	+	(CG)n	Simple_repeat	1	61	(0)	2373511
14	13.3	9.8	0.0	chr21	8402028	8402068	(38307915)	+	(CGTC)n	Simple_repeat	1	45	(0)	2373512
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
15708	0.1	0.0	0.0	chr21	8436876	8438744	(38271239)	+	SSU-rRNA_Hsa	rRNA	1	1869	(0)	2373613
13	8.1	3.6	3.5	chr21	8438766	8438793	(38271190)	+	(CCG)n	Simple_repeat	1	29	(0)	2373614
12	18.8	2.6	2.6	chr21	8438825	8438862	(38271121)	+	(CGCGTG)n	Simple_repeat	1	39	(0)	2373615
16	8.3	0.0	0.0	chr21	8438857	8438882	(38271101)	+	(CGTT)n	Simple_repeat	1	26	(0)	2373616
25399	0.2	1.5	0.8	chr21	8441146	8441992	(38267991)	+	LSU-rRNA_Hsa	rRNA	1	877	(4158)	2373624
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
3851	19.9	5.7	2.1	chr21	9118947	9120155	(37589828)	+	MER52A	LTR/ERV1	502	1755	(0)	2374256
2188	10.9	1.3	0.0	chr21	9149811	9150104	(37559879)	C	AluSp	SINE/Alu	(15)	298	1	2374290
404	15.6	1.5	0.0	chr21	9247151	9247214	(37462769)	+	AluYj4	SINE/Alu	224	288	(23)	2374339
74	12.3	0.0	0.0	chr21	9247783	9247915	(37462068)	+	(TGGAA)n	Simple_repeat	1	133	(0)	2374340
378	16.1	3.0	0.2	chr21	9247917	9247990	(37461993)	+	AluJb	SINE/Alu	216	290	(12)	2374341
1933	16.8	0.7	0.0	chr21	9309717	9310013	(37399970)	C	AluSx	SINE/Alu	(12)	300	2	2374413
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
3733	5.1	0.8	0.0	chr21	10269869	10270342	(36439641)	+	HSATI	Satellite	90	567	(10)	2375347
1732	14.4	0.0	5.1	chr21	10270343	10270634	(36439349)	+	AluSc8	SINE/Alu	13	289	(22)	2375348
471	27.5	6.0	1.2	chr21	10330456	10330628	(36379355)	C	ERVL-E-int	LTR/ERVL	(648)	5019	4838	2375365
5929	17.6	6.9	2.4	chr21	10361363	10362990	(36346993)	C	L1MA2	LINE/L1	(205)	6099	4327	2375401
2384	8.4	0.0	0.7	chr21	10362991	10363289	(36346694)	+	AluY	SINE/Alu	2	298	(13)	2375402
2093	14.3	0.0	0.3	chr21	10432014	10432313	(36277670)	C	AluSx	SINE/Alu	(13)	299	1	2375552
1894	12.1	1.5	0.7	chr21	10432387	10432659	(36277324)	C	AluSx1	SINE/Alu	(37)	275	1	2375553
10222	12.4	2.5	4.1	chr21	14228859	14230510	(32479473)	+	THE1D-int	LTR/ERVL-MaLR	6	1631	(0)	2377541
10320	13.3	3.4	0.4	chr21	14744794	14746373	(31963610)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	2	2378256
24040	7.3	0.4	0.5	chr21	14778902	14785063	(31924920)	+	L1PA6	LINE/L1	1	6141	(13)	2378295
7129	13.6	0.9	2.2	chr21	14845532	14846700	(31863283)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	427	2378365
11363	9.0	1.6	0.1	chr21	16463237	16464791	(30245192)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2380464
11021	11.9	1.3	0.4	chr21	16694359	16695975	(30014008)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	2380761
24053	7.0	1.0	0.2	chr21	17034153	17040255	(29669728)	+	L1PA6	LINE/L1	18	6154	(0)	2381140
25301	6.4	0.7	0.5	chr21	17271307	17277551	(29432432)	+	L1PA4	LINE/L1	2	6142	(13)	2381371
12	5.6	0.0	0.0	chr21	17612698	17612716	(29097267)	+	(CCG)n	Simple_repeat	1	19	(0)	2381936
6179	13.1	0.3	0.4	chr21	19040269	19041202	(27668781)	C	THE1B-int	LTR/ERVL-MaLR	(647)	933	1	2383801
9068	16.9	2.4	0.6	chr21	20622734	20624335	(26085648)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	2385903
9924	14.3	2.6	0.8	chr21	22336050	22337643	(24372340)	+	THE1D-int	LTR/ERVL-MaLR	3	1627	(4)	2388189
9399	13.9	3.0	3.6	chr21	23378093	23379681	(23330302)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	2389561
17134	14.8	3.8	0.5	chr21	30408694	30410680	(16299303)	+	L1PA16	LINE/L1	1113	3163	(3686)	2399756
900	22.8	0.0	0.0	chr21	32710529	32710686	(13999297)	C	FRAM	SINE/Alu	(16)	160	3	2403647
1680	25.7	4.7	1.1	chr21	36580630	36581081	(10128902)	C	LTR102_Mam	LTR/ERVL	(20)	831	363	2410134
26262	5.3	0.6	0.3	chr21	36616545	36622673	(10087310)	+	L1PA5	LINE/L1	11	6154	(0)	2410204
18	20.9	0.0	0.0	chr21	36699025	36699068	(10010915)	+	(CCGCCC)n	Simple_repeat	1	44	(0)	2410355
14	0.0	0.0	4.5	chr21	39313516	39313537	(7396446)	+	(GAGC)n	Simple_repeat	1	22	(0)	2414334
26	0.0	0.0	0.0	chr21	39313590	39313614	(7396369)	+	(CGC)n	Simple_repeat	1	25	(0)	2414335
11818	9.5	0.4	1.4	chr21	41995116	41996711	(4713272)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2418280
20	3.1	6.1	0.0	chr21	45073746	45073778	(1636205)	+	(AAAC)n	Simple_repeat	1	35	(0)	2422492
382	18.2	20.5	0.0	chr21	45074081	45074258	(1635725)	+	FRAM	SINE/Alu	15	287	(15)	2422493
4353	12.2	4.3	0.2	chr21	45953851	45954480	(755503)	+	PABL_A	LTR/ERV1	4	660	(0)	2423357
18616	6.9	0.4	0.0	chr22	11341433	11346064	(39472404)	+	L1P1	LINE/L1	7	4655	(1491)	2425054
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
27	15.2	8.5	4.3	chr22	11615784	11615889	(39202579)	+	A-rich	Low_complexity	1	115	(0)	2425258
643	22.0	0.5	0.4	chr22	11615918	11616592	(39201876)	+	(TCTC)n	Simple_repeat	1	677	(0)	2425259
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
1214	22.3	3.3	5.7	chr22	11871340	11871622	(38946846)	C	AluJb	SINE/Alu	(24)	288	13	2425473
1124	22.8	3.2	0.8	chr22	11900617	11900862	(38917606)	C	AluJr	SINE/Alu	(48)	264	13	2425511
290	22.2	1.5	0.5	chr22	11932477	11932565	(38885903)	C	L1P4	LINE/L1	(1123)	5023	4933	2425553
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
247	11.6	2.3	0.0	chr22	12903935	12903977	(37914491)	C	MADE1	DNA/TcMar-Mariner	(3)	77	34	2426187
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
3748	9.1	0.6	1.5	chr22	17039501	17040024	(33778444)	C	L1PB2	LINE/L1	(234)	5917	5399	2428102
830	19.9	6.0	7.5	chr22	17040025	17040099	(33778369)	+	MLT1A0	LTR/ERVL-MaLR	131	210	(155)	2428103
2075	7.6	0.0	0.0	chr22	17040100	17040384	(33778084)	C	AluYj4	SINE/Alu	(0)	311	33	2428104
665	13.6	6.1	0.8	chr22	17171204	17171328	(33647140)	C	AluJo	SINE/Alu	(179)	133	2	2428366
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
1333	17.8	9.6	2.9	chr22	19103764	19104044	(31714424)	+	AluJr4	SINE/Alu	1	302	(10)	2431447
995	20.1	4.6	0.0	chr22	19104044	19104252	(31714216)	C	Charlie1	DNA/hAT-Charlie	(2562)	219	1	2431448
190	37.9	16.0	3.1	chr22	19201805	19202472	(31615996)	+	L2a	LINE/L2	699	1468	(1951)	2431602
2437	11.9	19.3	13.8	chr22	19316621	19316963	(31501505)	+	LTR76	LTR/ERV1	232	675	(0)	2431792
2647	15.0	3.7	8.0	chr22	19316967	19317023	(31501445)	C	L1MC2	LINE/L1	(370)	5974	5924	2431794
2286	12.2	0.0	0.0	chr22	19317024	19317327	(31501141)	+	AluSz	SINE/Alu	5	308	(4)	2431795
2634	4.2	0.0	0.0	chr22	19695479	19695785	(31122683)	C	AluY	SINE/Alu	(4)	307	1	2432445
10658	7.1	6.4	0.7	chr22	23016097	23017584	(27800884)	C	LTR12C	LTR/ERV1	(0)	1579	2	2437657
12	21.6	5.3	3.3	chr22	23522607	23522663	(27295805)	+	(TGTTAC)n	Simple_repeat	1	60	(0)	2438434
18	10.4	2.1	6.2	chr22	23522720	23522766	(27295702)	+	G-rich	Low_complexity	1	48	(0)	2438435
2264	11.5	1.0	1.0	chr22	23564972	23565283	(27253185)	+	AluSx	SINE/Alu	1	312	(0)	2438494
335	34.3	4.5	1.8	chr22	23565343	23565512	(27252956)	C	MIR3	SINE/MIR	(24)	184	5	2438495
15	26.9	3.3	1.6	chr22	23565552	23565612	(27252856)	+	(CCCTCT)n	Simple_repeat	1	63	(0)	2438496
14	22.6	0.0	4.4	chr22	24156368	24156412	(26662056)	+	(GGC)n	Simple_repeat	1	45	(0)	2439581
20	20.2	0.0	2.3	chr22	25111218	25111260	(25707208)	+	(AC)n	Simple_repeat	1	43	(0)	2441503
13	14.7	3.3	0.0	chr22	25111408	25111437	(25707031)	+	(GCC)n	Simple_repeat	1	31	(0)	2441504
17199	5.1	1.0	0.1	chr22	25340103	25344989	(25473479)	C	L1PA4	LINE/L1	(0)	6155	1	2442026
6677	17.4	3.1	3.5	chr22	25412977	25414254	(25404214)	C	MSTA-int	LTR/ERVL-MaLR	(14)	1637	365	2442144
2099	9.9	0.0	0.7	chr22	25414255	25414548	(25403920)	+	AluSx3	SINE/Alu	1	292	(19)	2442146
286	30.0	3.9	1.0	chr22	27773535	27773635	(23044833)	C	MIRc	SINE/MIR	(116)	152	49	2447496
10589	9.3	1.7	0.1	chr22	28133243	28134796	(22683672)	+	L1P1	LINE/L1	7	1585	(4570)	2448035
25322	5.4	0.5	0.9	chr22	28333851	28340033	(22478435)	C	L1PA4	LINE/L1	(0)	6155	7	2448348
23849	6.7	0.7	0.2	chr22	28528948	28535075	(22283393)	+	L1PA5	LINE/L1	4	6154	(0)	2448649
23	33.0	0.0	2.9	chr22	30969596	30969698	(19848770)	+	(CGG)n	Simple_repeat	1	103	(0)	2453683
391	24.6	3.3	2.5	chr22	30969851	30969971	(19848497)	+	MIR1_Amn	SINE/MIR	21	142	(126)	2453684
188	19.2	7.1	5.5	chr22	30969992	30970046	(19848422)	+	MIRc	SINE/MIR	213	268	(0)	2453685
3206	25.1	6.8	5.5	chr22	32203087	32206587	(18611881)	C	REP522	Satellite/telo	(94)	3546	1	2456556
13	26.0	1.7	4.9	chr22	32474941	32475000	(18343468)	+	(GCC)n	Simple_repeat	1	61	(0)	2457054
17350	7.2	0.2	0.1	chr22	32941473	32944345	(17874123)	+	L1PA5	LINE/L1	11	2886	(3260)	2458035
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
8163	18.6	4.6	0.9	chr22	33610143	33611731	(17206737)	+	MSTB-int	LTR/ERVL-MaLR	2	1651	(0)	2459433
10739	11.2	1.5	3.6	chr22	33788408	33790022	(17028446)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2459784
26169	6.3	0.4	0.1	chr22	34788710	34794838	(16023630)	+	L1PA5	LINE/L1	3	6146	(8)	2461641
18057	6.8	0.3	0.0	chr22	35165681	35170019	(15648449)	+	L1P1	LINE/L1	11	4359	(1787)	2462404
596	27.9	10.3	0.9	chr22	35257128	35257355	(15561113)	+	MIRb	SINE/MIR	2	253	(15)	2462579
1156	16.4	10.6	1.2	chr22	36273041	36273347	(14545121)	+	MSTA	LTR/ERVL-MaLR	1	428	(0)	2464696
199	23.9	1.5	10.7	chr22	36777708	36777749	(14040719)	+	MIRb	SINE/MIR	113	151	(117)	2465821
3712	7.5	0.6	0.2	chr22	36777750	36778233	(14040235)	+	LTR19A	LTR/ERV1	1	486	(0)	2465822
295	30.7	7.4	1.4	chr22	38056693	38056831	(12761637)	C	MIR3	SINE/MIR	(36)	172	25	2468714
224	34.3	9.3	1.4	chr22	38056852	38056990	(12761478)	+	MIR3	SINE/MIR	31	181	(27)	2468715
17	25.9	1.4	4.2	chr22	38317669	38317738	(12500730)	+	G-rich	Low_complexity	1	71	(0)	2469245
648	23.6	0.0	13.3	chr22	38606446	38606602	(12211866)	+	MER74A	LTR/ERVL	315	442	(116)	2469893
2543	6.9	0.0	0.0	chr22	38606897	38607199	(12211269)	+	AluSg	SINE/Alu	1	303	(7)	2469895
40	2.5	0.0	0.0	chr22	38843958	38843998	(11974470)	+	(GGAGCC)n	Simple_repeat	1	41	(0)	2470391
18	21.4	5.1	0.0	chr22	38844089	38844147	(11974321)	+	(CGGCCC)n	Simple_repeat	1	62	(0)	2470392
16	0.0	0.0	0.0	chr22	40081308	40081324	(10737144)	+	(T)n	Simple_repeat	1	17	(0)	2472853
241	30.7	15.7	1.2	chr22	40081325	40081492	(10736976)	+	L2c	LINE/L2	3041	3237	(150)	2472854
813	30.4	2.0	0.0	chr22	40081532	40081774	(10736694)	+	MIR	SINE/MIR	15	262	(0)	2472855
207	40.3	4.0	1.6	chr22	40081979	40082099	(10736369)	C	L2b	LINE/L2	(11)	3364	3241	2472856
32	5.3	0.0	0.0	chr22	41544351	41544389	(9274079)	+	(CGCCA)n	Simple_repeat	1	39	(0)	2476153
22	17.4	5.2	0.0	chr22	41544391	41544448	(9274020)	+	(CGCACCA)n	Simple_repeat	1	61	(0)	2476154
219	32.2	4.8	2.5	chr22	41544685	41544805	(9273663)	+	L2	LINE/L2	2721	2844	(575)	2476155
479	27.8	3.9	0.0	chr22	41544849	41545021	(9273447)	+	L1ME2	LINE/L1	5985	6164	(0)	2476156
259	33.7	6.0	6.5	chr22	42399477	42399521	(8418947)	C	L2c	LINE/L2	(369)	3006	2965	2477969
2549	4.3	3.5	0.0	chr22	43142505	43142804	(7675664)	+	AluY	SINE/Alu	1	311	(0)	2479693
14	15.3	2.6	2.6	chr22	44568004	44568041	(6250427)	+	(GGCACA)n	Simple_repeat	1	39	(0)	2482211
2859	24.4	4.3	4.4	chr22	44568311	44568353	(6250115)	+	L1ME2	LINE/L1	5263	5312	(852)	2482212
392	30.9	5.7	0.7	chr22	44685008	44685157	(6133311)	+	MIRb	SINE/MIR	21	178	(90)	2482426
262	30.3	10.4	4.3	chr22	45268945	45269106	(5549362)	C	ORSL	DNA/hAT-Tip100	(22)	253	81	2483577
46	4.1	0.0	0.0	chr22	45269255	45269305	(5549163)	+	(GGCGGG)n	Simple_repeat	1	51	(0)	2483578
258	31.8	12.8	3.4	chr22	45269343	45269638	(5548830)	+	L2c	LINE/L2	2961	3288	(87)	2483566
2193	13.2	0.3	0.0	chr22	45499440	45499743	(5318725)	+	AluSx3	SINE/Alu	1	305	(6)	2484069
263	33.9	10.5	4.5	chr22	45500005	45500142	(5318326)	+	L2b	LINE/L2	1964	2100	(1319)	2484070
3534	16.7	8.5	14.2	chr22	46755561	46756681	(4061787)	C	MSTB-int	LTR/ERVL-MaLR	(314)	1337	1	2486013
12	18.1	0.0	3.0	chr22	47064582	47064614	(3753854)	+	(CCTGC)n	Simple_repeat	1	33	(0)	2486390
541	20.6	17.4	5.1	chr22	47270352	47270566	(3547902)	+	MLT1K	LTR/ERVL-MaLR	6	252	(343)	2486638
319	21.1	14.3	2.2	chr22	47270584	47270675	(3547793)	+	MLT1K	LTR/ERVL-MaLR	147	251	(344)	2486639
477	22.1	10.6	1.6	chr22	47270695	47270823	(3547645)	+	MLT1K	LTR/ERVL-MaLR	148	289	(306)	2486640
476	32.1	5.8	1.4	chr22	47270847	47271058	(3547410)	C	MIRb	SINE/MIR	(7)	261	40	2486641
16	0.0	0.0	0.0	chr22	49855582	49855599	(962869)	+	(GT)n	Simple_repeat	1	18	(0)	2489844
31	0.0	0.0	0.0	chr22	49929463	49929491	(888977)	+	(GGGGCT)n	Simple_repeat	1	29	(0)	2489976
19	12.9	2.2	4.3	chr22	49929529	49929574	(888894)	+	(CCGCC)n	Simple_repeat	1	47	(0)	2489977
34	36.0	0.0	4.0	chr22	49970634	49970807	(847661)	+	(GT)n	Simple_repeat	1	174	(0)	2490008
2491	2.4	0.3	0.0	chr22	50341713	50342004	(476464)	+	AluYm1	SINE/Alu	1	293	(18)	2490486
546	21.8	29.2	4.0	chr22	50342271	50342602	(475866)	C	LTR41	LTR/ERVL	(308)	460	5	2490487
704	5.2	1.1	2.0	chr3	10001	10916	(198284643)	+	(CTAACC)n	Simple_repeat	1	926	(0)	2492347
25341	6.6	0.2	0.0	chr3	1477492	1483625	(196811934)	+	L1PA5	LINE/L1	11	6153	(1)	2494492
26159	5.4	0.4	0.4	chr3	2666595	2672735	(195622824)	C	L1PA5	LINE/L1	(1)	6153	14	2496207
15790	6.8	0.5	0.8	chr3	3044634	3047954	(195247605)	+	L1P1	LINE/L1	11	3315	(2831)	2496816
5480	12.5	7.1	6.5	chr3	4865411	4866471	(193429088)	C	Tigger2b_Pri	DNA/TcMar-Tigger	(0)	1068	1	2499698
25902	6.2	0.3	0.1	chr3	4965758	4971913	(193323646)	+	L1PA4	LINE/L1	4	6155	(0)	2499883
2153	16.1	5.1	0.7	chr3	8416832	8417244	(189878315)	C	MSTB1	LTR/ERVL-MaLR	(0)	432	1	2505307
26445	5.0	0.6	0.0	chr3	8921953	8928067	(189367492)	+	L1PA4	LINE/L1	2	6154	(1)	2506178
401	31.2	8.8	2.6	chr3	9208734	9208924	(189086635)	+	MIRb	SINE/MIR	29	232	(36)	2506732
320	30.4	3.4	10.5	chr3	9362688	9362878	(188932681)	+	MIRb	SINE/MIR	83	259	(9)	2507068
491	24.4	3.4	0.0	chr3	11847149	11847263	(186448296)	C	L1MB5	LINE/L1	(0)	6174	6056	2512234
25017	6.5	0.4	0.0	chr3	11861988	11868130	(186427429)	C	L1PA6	LINE/L1	(1)	6153	6	2512269
9249	10.3	4.2	4.4	chr3	12845666	12847152	(185448407)	+	THE1B-int	LTR/ERVL-MaLR	97	1580	(0)	2514237
202	27.2	3.9	4.0	chr3	13000347	13000487	(185295072)	+	L2c	LINE/L2	3270	3386	(1)	2514449
276	32.9	11.0	0.7	chr3	13000496	13000633	(185294926)	+	L2b	LINE/L2	3201	3354	(21)	2514450
508	30.9	4.1	1.8	chr3	13000778	13000942	(185294617)	C	MIRb	SINE/MIR	(3)	265	97	2514451
358	30.5	8.3	3.8	chr3	13187157	13187340	(185108219)	C	L2c	LINE/L2	(13)	3374	3182	2514796
17	29.9	0.0	0.0	chr3	13650691	13650747	(184644812)	+	(GCGGT)n	Simple_repeat	1	57	(0)	2515681
14	15.4	6.7	2.1	chr3	13650739	13650783	(184644776)	+	(GGCCA)n	Simple_repeat	1	48	(0)	2515682
343	20.9	10.8	3.4	chr3	13650819	13650937	(184644622)	+	Charlie4a	DNA/hAT-Charlie	25	153	(355)	2515683
25066	4.7	0.3	0.2	chr3	13989715	13995860	(184299699)	C	L1PA4	LINE/L1	(2)	6153	2	2516199
25059	4.8	0.2	0.1	chr3	14070098	14076246	(184219313)	+	L1PA4	LINE/L1	1	6155	(0)	2516268
26829	5.1	0.5	0.1	chr3	15391508	15397614	(182897945)	C	L1PA4	LINE/L1	(4)	6151	20	2518747
3137	8.9	1.2	0.9	chr3	16081205	16081634	(182213925)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1150	2519900
5796	12.9	5.4	0.2	chr3	16081620	16082512	(182213047)	C	THE1B-int	LTR/ERVL-MaLR	(687)	944	3	2519900
837	25.2	7.1	5.9	chr3	16655592	16656037	(181639522)	C	L2a	LINE/L2	(186)	3240	2782	2520850
19	3.3	3.0	2.9	chr3	18444826	18444858	(179850701)	+	(GAGC)n	Simple_repeat	1	34	(0)	2523290
34	29.0	0.7	4.6	chr3	18444859	18444970	(179850589)	+	G-rich	Low_complexity	6	151	(0)	2523291
12	21.4	3.3	6.3	chr3	18445150	18445210	(179850349)	+	(CGGCC)n	Simple_repeat	1	63	(0)	2523292
18	10.7	0.0	3.0	chr3	18445289	18445321	(179850238)	+	(GCC)n	Simple_repeat	1	33	(0)	2523293
13	21.8	2.6	0.0	chr3	18445552	18445589	(179849970)	+	(CTTGTTG)n	Simple_repeat	1	39	(0)	2523294
10954	10.6	2.4	0.0	chr3	18597302	18598843	(179696716)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2523510
17672	7.2	1.0	0.2	chr3	22082079	22086635	(176208924)	+	L1PA5	LINE/L1	1	4576	(1570)	2528238
237	24.4	27.2	1.9	chr3	23921216	23921428	(174374131)	+	L2	LINE/L2	2744	3030	(389)	2531004
2221	12.5	0.7	0.0	chr3	23921571	23921874	(174373685)	C	AluSz	SINE/Alu	(6)	306	1	2531005
25599	5.7	0.3	1.5	chr3	26036529	26042769	(172252790)	C	L1HS	LINE/L1	(2)	6153	1	2534206
11760	9.8	0.6	0.0	chr3	26283156	26284725	(172010834)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2534489
11871	9.8	0.1	0.4	chr3	26603039	26604622	(171690937)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2534913
345	25.4	11.6	3.0	chr3	28241156	28241289	(170054270)	+	L2a	LINE/L2	3279	3425	(1)	2537505
23674	7.5	0.8	0.6	chr3	29670286	29676431	(168619128)	+	L1PA5	LINE/L1	4	6148	(6)	2539507
16354	8.1	0.8	0.0	chr3	30213409	30216503	(168079056)	C	L1P1	LINE/L1	(3024)	3122	1	2540238
8023	11.6	0.2	0.0	chr3	31146821	31147916	(167147643)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	483	2541627
10630	11.1	3.5	0.5	chr3	32965129	32966660	(165328899)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2545043
13	25.0	2.7	5.3	chr3	33097152	33097224	(165198335)	+	(CCCGCGC)n	Simple_repeat	1	75	(0)	2545277
18	28.8	1.1	5.3	chr3	33277592	33277684	(165017875)	+	G-rich	Low_complexity	1	94	(0)	2545610
26825	5.6	0.1	0.0	chr3	34094087	34100223	(164195336)	+	L1PA4	LINE/L1	14	6154	(1)	2546937
18	23.1	4.0	3.8	chr3	37452044	37452119	(160843440)	+	(CGC)n	Simple_repeat	1	79	(0)	2551605
13	19.2	2.2	4.3	chr3	37452591	37452635	(160842924)	+	(CCGCCG)n	Simple_repeat	1	46	(0)	2551606
18	17.6	3.6	3.5	chr3	38165766	38165820	(160129739)	+	(GGC)n	Simple_repeat	1	57	(0)	2552612
10271	10.9	5.6	1.1	chr3	38432574	38433892	(159861667)	C	THE1C-int	LTR/ERVL-MaLR	(183)	1397	1	2553043
650	21.6	9.4	6.2	chr3	38457212	38457405	(159838154)	C	MER33	DNA/hAT-Charlie	(114)	210	4	2553076
2442	13.6	2.5	0.5	chr3	39454586	39454978	(158840581)	C	MER67C	LTR/ERV1	(262)	449	49	2554567
24212	6.4	0.9	0.2	chr3	39953563	39959686	(158335873)	+	L1PA5	LINE/L1	4	6153	(1)	2555237
21862	7.6	1.3	0.4	chr3	40945300	40951405	(157344154)	C	L1PA6	LINE/L1	(5)	6322	178	2556799
14702	8.0	1.8	0.9	chr3	41277830	41279783	(157015776)	+	L1PA6	LINE/L1	5	1977	(4207)	2557269
24636	5.2	0.5	0.1	chr3	41824183	41830304	(156465255)	+	L1PA4	LINE/L1	4	6151	(4)	2558009
17179	7.4	1.8	1.9	chr3	42103716	42104949	(156190610)	+	L1P2	LINE/L1	4	1250	(4934)	2558559
24603	5.3	0.2	0.0	chr3	43678955	43685094	(154610465)	+	L1PA4	LINE/L1	1	6155	(0)	2560983
12126	10.0	0.7	1.2	chr3	44561433	44562700	(153732859)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	362	2562306
263	29.0	16.9	0.0	chr3	44729869	44730030	(153565529)	+	MIRc	SINE/MIR	24	218	(50)	2562571
15248	6.6	1.0	0.1	chr3	44822090	44824143	(153471416)	C	L1PA6	LINE/L1	(4103)	2254	181	2562732
12758	9.6	0.7	0.9	chr3	46822657	46824230	(151471329)	C	THE1D-int	LTR/ERVL-MaLR	(51)	1580	1	2565979
2087	15.2	0.0	1.3	chr3	50263218	50263527	(148032032)	+	AluJb	SINE/Alu	6	311	(1)	2572840
6101	10.5	4.3	7.9	chr3	50836165	50837263	(147458296)	C	THE1C-int	LTR/ERVL-MaLR	(521)	1059	2	2573640
24181	7.8	0.4	0.6	chr3	51006625	51012783	(147282776)	C	L1PA5	LINE/L1	(1)	6153	13	2573838
10940	9.7	0.7	0.2	chr3	51012794	51014303	(147281256)	C	L1P2	LINE/L1	(4666)	1518	1	2573839
15438	6.9	1.2	0.4	chr3	51151522	51153643	(147141916)	C	L1PA6	LINE/L1	(4044)	2140	1	2574003
28	29.3	2.8	0.9	chr3	51391240	51391358	(146904201)	+	(CGC)n	Simple_repeat	1	121	(0)	2574235
19	13.0	0.0	0.0	chr3	51538798	51538831	(146756728)	+	(CCG)n	Simple_repeat	1	34	(0)	2574563
14	17.3	5.1	0.0	chr3	51538872	51538910	(146756649)	+	(CGGCG)n	Simple_repeat	1	41	(0)	2574564
24803	6.4	0.8	0.1	chr3	51647859	51653935	(146641624)	+	L1PA6	LINE/L1	37	6145	(9)	2574794
24721	7.3	0.8	0.2	chr3	53391156	53397284	(144898275)	+	L1PA6	LINE/L1	4	6151	(3)	2577567
24670	6.8	1.0	0.2	chr3	53467964	53474076	(144821483)	C	L1PA6	LINE/L1	(2)	6152	5	2577685
26437	5.0	1.1	0.1	chr3	55388740	55394831	(142900728)	+	L1PA4	LINE/L1	3	6155	(0)	2580365
7910	9.1	1.1	4.7	chr3	56211094	56213075	(142082484)	+	L1PB1	LINE/L1	4134	6040	(111)	2581686
24788	5.3	0.5	0.0	chr3	56213070	56219149	(142076410)	+	L1PA4	LINE/L1	41	6154	(1)	2581687
396	27.8	6.3	13.7	chr3	56472349	56472677	(141822882)	C	L2c	LINE/L2	(787)	2632	2330	2582192
22755	7.1	1.1	0.4	chr3	56576407	56582528	(141713031)	C	L1PA5	LINE/L1	(0)	6154	4	2582388
26913	4.8	0.1	0.2	chr3	56945133	56951290	(141344269)	+	L1PA4	LINE/L1	2	6154	(1)	2583039
947	17.9	12.7	1.3	chr3	58188075	58188311	(140107248)	C	ORSL	DNA/hAT-Tip100	(0)	275	8	2585519
640	28.1	1.5	4.8	chr3	58188313	58188521	(140107038)	+	MIRb	SINE/MIR	67	268	(0)	2585518
945	25.4	8.1	2.6	chr3	58306734	58307373	(139988186)	C	L2a	LINE/L2	(0)	3426	2741	2585764
25079	4.8	0.4	0.1	chr3	58758540	58764668	(139530891)	C	L1PA4	LINE/L1	(3)	6152	3	2586615
10782	10.1	3.0	1.0	chr3	59229671	59231217	(139064342)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2587209
16862	11.9	0.5	1.9	chr3	65119889	65126215	(133169344)	+	L1PA4	LINE/L1	3	6155	(0)	2596936
13758	5.8	0.1	0.1	chr3	65217683	65220273	(133075286)	C	L1PA5	LINE/L1	(8)	6146	3555	2597072
3905	11.4	1.5	0.3	chr3	65220272	65220867	(133074692)	C	L1P2	LINE/L1	(5581)	603	1	2597073
806	21.4	3.9	7.1	chr3	65855987	65856197	(132439362)	+	MER3	DNA/hAT-Charlie	1	204	(5)	2598143
282	24.6	2.8	1.4	chr3	65856139	65856208	(132439351)	C	MER3	DNA/hAT-Charlie	(97)	112	42	2598144
24519	7.7	0.4	0.2	chr3	66763672	66769805	(131525754)	C	L1PA7	LINE/L1	(10)	6144	1	2599848
10207	20.8	4.0	6.1	chr3	66915122	66915600	(131379959)	+	L1M4	LINE/L1	2195	2647	(4870)	2600089
1115	10.6	1.2	0.0	chr3	66915658	66915817	(131379742)	+	L1PA4	LINE/L1	2	163	(5992)	2600094
8147	6.8	0.5	0.2	chr3	66915798	66916859	(131378700)	+	L1PA4	LINE/L1	495	1559	(4596)	2600094
559	27.2	4.3	2.2	chr3	67384722	67384905	(130910654)	C	MER117	DNA/hAT-Charlie	(5)	192	5	2600754
26178	6.5	0.3	0.1	chr3	69344861	69350993	(128944566)	+	L1PA5	LINE/L1	11	6154	(0)	2603993
1019	17.0	0.0	0.6	chr3	69752741	69752923	(128542636)	+	MSTA	LTR/ERVL-MaLR	122	303	(125)	2604755
6644	14.9	0.9	0.7	chr3	69752926	69754018	(128541541)	+	MSTA-int	LTR/ERVL-MaLR	537	1631	(0)	2604754
25014	7.0	0.4	0.1	chr3	70675669	70681798	(127613761)	C	L1PA5	LINE/L1	(0)	6154	4	2606140
17469	6.5	0.2	0.1	chr3	70894501	70898957	(127396602)	C	L1P1	LINE/L1	(1682)	4464	2	2606443
14	21.0	6.2	2.9	chr3	71064928	71064991	(127230568)	+	(CGCGC)n	Simple_repeat	1	68	(0)	2606645
14	24.0	0.0	0.0	chr3	71064963	71065001	(127230558)	+	(CGCCC)n	Simple_repeat	1	39	(0)	2606646
28	0.0	0.0	0.0	chr3	71065026	71065052	(127230507)	+	(CCGCG)n	Simple_repeat	1	27	(0)	2606647
17	13.9	0.0	6.7	chr3	71065067	71065111	(127230448)	+	(CCGCGC)n	Simple_repeat	1	45	(0)	2606648
271	37.4	5.2	0.7	chr3	72124335	72124482	(126171077)	+	MIR3	SINE/MIR	6	160	(48)	2608520
675	31.8	3.4	3.0	chr3	72153521	72153786	(126141773)	C	MIRb	SINE/MIR	(0)	268	2	2608583
26241	6.2	0.2	0.2	chr3	72710342	72716487	(125579072)	C	L1PA5	LINE/L1	(0)	6154	11	2609794
1795	10.5	0.0	7.2	chr3	73038364	73038640	(125256919)	C	AluSg	SINE/Alu	(0)	310	54	2610499
26034	6.5	0.5	0.2	chr3	73332851	73338990	(124956569)	C	L1PA5	LINE/L1	(3)	6151	4	2611051
25793	6.4	0.4	0.4	chr3	75483459	75489612	(122805947)	C	L1PA5	LINE/L1	(0)	6154	1	2614301
320	21.9	0.0	9.6	chr3	75668819	75668954	(122626605)	C	LSAU	Satellite	(374)	124	2	2614560
238	32.6	4.9	0.0	chr3	75783895	75784029	(122511530)	+	MLT1H	LTR/ERVL-MaLR	1	142	(347)	2614702
345	25.3	4.0	6.3	chr3	75784125	75784356	(122511203)	+	MLT1H	LTR/ERVL-MaLR	325	549	(0)	2614702
13736	7.2	1.7	0.1	chr3	75810139	75811997	(122483562)	C	HERVK14-int	LTR/ERVK	(4207)	1889	1	2614734
1226	27.4	5.7	0.8	chr3	79894429	79894925	(118400634)	+	L1M5	LINE/L1	5262	5784	(378)	2620040
2887	16.6	0.4	0.4	chr3	79894927	79895411	(118400148)	+	MER66B	LTR/ERV1	2	486	(0)	2620041
9930	12.8	2.8	2.7	chr3	80704591	80706168	(117589391)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2621104
24882	7.1	0.3	0.2	chr3	84809768	84815899	(113479660)	C	L1PA5	LINE/L1	(5)	6149	15	2626209
9286	17.6	2.0	1.2	chr3	85698793	85699946	(112595613)	C	MSTA-int	LTR/ERVL-MaLR	(2)	1629	470	2627371
24629	7.3	0.5	0.1	chr3	86092964	86099092	(112196467)	+	L1PA5	LINE/L1	3	6148	(6)	2627836
25593	6.2	0.1	0.2	chr3	86297031	86303174	(111992385)	+	L1PA5	LINE/L1	11	6146	(8)	2628104
22990	8.1	0.4	0.9	chr3	86703301	86709504	(111586055)	C	L1PA6	LINE/L1	(2)	6325	174	2628590
10069	11.5	5.1	0.7	chr3	87473537	87475046	(110820513)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(0)	2629575
11094	10.6	0.6	3.5	chr3	87968512	87969771	(110325788)	+	THE1B-int	LTR/ERVL-MaLR	360	1580	(0)	2630181
23959	6.9	0.5	0.2	chr3	88181953	88188095	(110107464)	+	L1PA6	LINE/L1	5	6151	(3)	2630492
22927	8.4	0.4	2.2	chr3	88746910	88753147	(109542412)	+	L1PA6	LINE/L1	177	6327	(0)	2631209
10450	13.5	1.1	0.6	chr3	88794792	88796414	(109499145)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	2631249
15587	7.9	1.2	0.1	chr3	89034516	89036584	(109258975)	+	L1P1	LINE/L1	2	2094	(4061)	2631546
25292	6.5	0.3	0.4	chr3	89831716	89837875	(108457684)	+	L1PA4	LINE/L1	2	6155	(0)	2632472
16810	8.4	0.1	0.0	chr3	89995975	90000000	(108295559)	+	L1P1	LINE/L1	175	4205	(2114)	2632650
24523	7.8	0.2	0.2	chr3	90104987	90111136	(108184423)	C	L1PA5	LINE/L1	(1)	6326	177	2632773
23951	8.0	0.5	0.2	chr3	94630629	94636779	(103658780)	+	L1PA6	LINE/L1	175	6327	(0)	2634549
25918	5.7	0.1	0.0	chr3	95860388	95866536	(102429023)	+	L1PA4	LINE/L1	1	6155	(0)	2636010
10923	10.7	1.5	0.0	chr3	96288109	96289665	(102005894)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	2636513
23818	6.8	0.7	0.1	chr3	98858831	98864866	(99430693)	+	L1PA5	LINE/L1	134	6154	(0)	2639556
7567	8.4	0.1	0.1	chr3	99073673	99074671	(99220888)	C	L1P1	LINE/L1	(5156)	999	1	2639816
10209	11.4	0.6	8.3	chr3	99444588	99446300	(98849259)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2640261
12128	9.8	2.4	0.8	chr3	100179225	100180827	(98114732)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	2	2641292
821	18.9	7.3	0.0	chr3	100260304	100260494	(98035065)	+	MER115	DNA/hAT-Tip100	483	688	(5)	2641429
17469	7.7	0.2	3.3	chr3	100479026	100480705	(97814854)	C	L1PA4	LINE/L1	(4518)	1666	5	2641779
57	3.1	0.0	2.9	chr3	101213723	101213791	(97081768)	+	(TTTC)n	Simple_repeat	1	69	(0)	2642737
11455	11.3	0.2	2.9	chr3	101213792	101214865	(97080694)	+	MSTA-int	LTR/ERVL-MaLR	602	1631	(0)	2642736
25800	5.8	0.3	0.0	chr3	102039924	102046053	(96249506)	+	L1PA5	LINE/L1	1	6150	(4)	2643985
7289	14.0	2.4	0.3	chr3	102505520	102506631	(95788928)	+	THE1C-int	LTR/ERVL-MaLR	496	1631	(0)	2644620
3582	9.6	2.4	0.2	chr3	104281432	104281932	(94013627)	C	MER9a3	LTR/ERVK	(0)	512	1	2646864
34885	6.2	0.4	0.3	chr3	104281933	104286310	(94009249)	C	HERVK9-int	LTR/ERVK	(0)	6021	1638	2646864
5750	16.9	0.6	10.3	chr3	104630418	104631635	(93663924)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	533	2647226
14227	6.9	1.0	0.1	chr3	109218605	109220510	(89075049)	+	L1P2	LINE/L1	10	1932	(4252)	2653448
15878	8.5	0.4	0.0	chr3	109521769	109524160	(88771399)	+	L1PA5	LINE/L1	1	2401	(3745)	2654061
23864	7.6	0.4	0.9	chr3	109664744	109670946	(88624613)	+	L1PA6	LINE/L1	174	6324	(3)	2654259
8685	18.0	2.6	0.3	chr3	110071518	110073064	(88222495)	+	MSTB-int	LTR/ERVL-MaLR	1	1583	(68)	2654802
9079	13.9	9.9	0.1	chr3	110294196	110295662	(87999897)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	6	2655087
10367	11.5	2.8	0.7	chr3	110669951	110671433	(87624126)	+	THE1B-int	LTR/ERVL-MaLR	1	1515	(65)	2655540
11385	9.2	1.7	0.9	chr3	111095938	111097504	(87198055)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2656083
11121	12.4	1.4	0.0	chr3	111661338	111662946	(86632613)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	2656743
25413	7.0	0.2	0.0	chr3	112211222	112217359	(86078200)	+	L1PA5	LINE/L1	174	6323	(4)	2657512
353	31.9	0.6	0.9	chr3	112562474	112562611	(85732948)	+	MIR3	SINE/MIR	57	191	(17)	2658011
22492	7.0	0.4	0.2	chr3	113366592	113372740	(84922819)	+	L1PA6	LINE/L1	5	6153	(1)	2659088
2360	9.6	0.3	1.3	chr3	113838290	113838592	(84456967)	+	AluSq2	SINE/Alu	1	300	(13)	2659864
22	10.0	4.7	0.0	chr3	113838845	113838887	(84456672)	+	(GGTGC)n	Simple_repeat	1	45	(0)	2659865
10267	11.4	3.2	4.3	chr3	115505026	115506623	(82788936)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2662204
16619	7.2	0.3	0.7	chr3	115737166	115738630	(82556929)	C	L1PA6	LINE/L1	(4718)	1466	2	2662522
26140	5.1	0.1	0.2	chr3	117777981	117784141	(80511418)	+	L1PA4	LINE/L1	1	6154	(1)	2665366
9181	12.7	0.8	12.5	chr3	118332212	118333997	(79961562)	+	THE1D-int	LTR/ERVL-MaLR	2	1576	(4)	2666073
9790	4.9	0.1	14.8	chr3	119241924	119243542	(79052017)	+	SVA_B	Retroposon/SVA	1	1380	(3)	2667271
12166	9.9	0.7	0.0	chr3	119281814	119283432	(79012127)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	2667314
27	0.0	6.1	0.0	chr3	119677004	119677036	(78618523)	+	(GGGGC)n	Simple_repeat	1	35	(0)	2667998
51	4.7	1.5	1.4	chr3	119677072	119677139	(78618420)	+	(AGAGGGC)n	Simple_repeat	1	69	(0)	2667999
20473	8.6	2.0	0.7	chr3	120003777	120009853	(78285706)	+	L1PA7	LINE/L1	5	6154	(0)	2668482
13	5.2	0.0	0.0	chr3	120349090	120349109	(77946450)	+	(GCA)n	Simple_repeat	1	20	(0)	2669018
23925	6.6	1.7	0.1	chr3	120732566	120738623	(77556936)	C	L1PA5	LINE/L1	(2)	6152	1	2669599
22646	7.2	0.8	0.2	chr3	121386404	121392538	(76903021)	C	L1PA6	LINE/L1	(1)	6326	176	2670324
12567	9.2	0.9	0.1	chr3	121450589	121452422	(76843137)	C	L1P1	LINE/L1	(4305)	1850	2	2670399
24263	6.5	0.6	2.6	chr3	122650967	122653820	(75641739)	+	L1PA6	LINE/L1	1	2778	(3368)	2672398
7267	5.8	0.2	0.0	chr3	122667183	122668384	(75627175)	C	L1PA6	LINE/L1	(18)	6136	4933	2672421
5332	10.8	0.7	0.0	chr3	122668382	122669132	(75626427)	C	L1P2	LINE/L1	(5428)	756	1	2672422
242	40.6	3.5	2.4	chr3	123329096	123329264	(74966295)	+	Tigger19a	DNA/TcMar-Tigger	121	291	(32)	2673527
11670	10.1	0.6	0.5	chr3	123590291	123591868	(74703691)	C	THE1D-int	LTR/ERVL-MaLR	(51)	1580	1	2673970
2169	10.1	4.4	4.9	chr3	123891837	123892202	(74403357)	C	THE1B	LTR/ERVL-MaLR	(0)	364	1	2674453
8036	10.8	1.0	2.1	chr3	123892203	123892620	(74402939)	C	MSTA-int	LTR/ERVL-MaLR	(718)	913	493	2674451
20	20.0	3.4	1.6	chr3	125375018	125375029	(72920530)	+	(CCGCCC)n	Simple_repeat	1	36	(25)	2676880
19	22.6	0.0	0.0	chr3	125375030	125375070	(72920489)	+	(C)n	Simple_repeat	1	41	(0)	2676881
20	20.0	3.4	1.6	chr3	125375071	125375076	(72920483)	+	(CCGCCC)n	Simple_repeat	37	61	(0)	2676880
25996	6.0	0.4	0.4	chr3	125849811	125855962	(72439597)	+	L1PA4	LINE/L1	1	6155	(0)	2677778
10247	15.2	1.0	0.2	chr3	126027565	126029182	(72266377)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	2678034
24972	6.0	1.2	0.3	chr3	126586013	126591777	(71703782)	C	L1PA5	LINE/L1	(12)	6142	340	2678811
11815	11.2	2.5	1.7	chr3	126591778	126592538	(71703021)	C	Tigger1	DNA/TcMar-Tigger	(324)	2094	1330	2678810
26402	5.5	0.3	0.1	chr3	126785839	126791613	(71503946)	C	L1PA4	LINE/L1	(11)	6144	359	2679096
2257	10.5	0.3	0.3	chr3	126791614	126791909	(71503650)	C	AluSq2	SINE/Alu	(17)	296	1	2679097
468	25.0	12.3	1.8	chr3	127591295	127591461	(70704098)	C	MIRb	SINE/MIR	(81)	187	1	2680326
14138	15.9	3.5	4.9	chr3	128857767	128859679	(69435880)	C	HERV3-int	LTR/ERV1	(6538)	1888	2	2682563
2833	13.0	5.8	1.5	chr3	128859680	128860156	(69435403)	C	LTR4	LTR/ERV1	(0)	596	98	2682563
10337	9.9	2.7	3.8	chr3	129696569	129698106	(68597453)	C	THE1C-int	LTR/ERVL-MaLR	(55)	1525	1	2684237
367	24.5	15.8	3.7	chr3	129746843	129747003	(68548556)	+	MIRb	SINE/MIR	16	199	(69)	2684323
8533	8.1	0.1	0.2	chr3	130832177	130833367	(67462192)	+	L1P1	LINE/L1	361	1550	(4605)	2686056
24653	6.9	0.6	0.2	chr3	131115990	131122113	(67173446)	C	L1PA5	LINE/L1	(13)	6141	4	2686438
11514	9.5	0.5	2.1	chr3	133010961	133012564	(65282995)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	3	2689284
795	18.4	0.0	2.5	chr3	133037914	133038075	(65257484)	+	MER5A1	DNA/hAT-Charlie	4	161	(5)	2689334
18	29.3	1.7	0.0	chr3	133038328	133038385	(65257174)	+	(GC)n	Simple_repeat	1	59	(0)	2689335
13	15.9	0.0	0.0	chr3	133038492	133038519	(65257040)	+	G-rich	Low_complexity	1	28	(0)	2689336
17266	8.5	0.1	0.8	chr3	134100583	134102200	(64193359)	C	L1PA5	LINE/L1	(4535)	1620	11	2690928
3770	25.0	6.5	3.1	chr3	134102172	134103037	(64192522)	C	L1MEc	LINE/L1	(634)	2118	847	2690930
15044	18.2	3.1	1.2	chr3	134117545	134124506	(64171053)	C	L1PB4	LINE/L1	(7)	7118	1	2690959
17144	6.0	0.9	0.4	chr3	134139879	134142740	(64152819)	+	L1P2	LINE/L1	1	2859	(3287)	2690980
12	11.1	3.2	3.1	chr3	135965575	135965605	(62329954)	+	G-rich	Low_complexity	1	32	(0)	2693591
333	32.5	11.8	5.3	chr3	135965611	135965668	(62329891)	C	L1MEc	LINE/L1	(6337)	530	465	2693576
28	3.3	0.0	0.0	chr3	135965669	135965699	(62329860)	+	(GAG)n	Simple_repeat	1	31	(0)	2693592
333	32.5	11.8	5.3	chr3	135965700	135965939	(62329620)	C	L1MEc	LINE/L1	(6403)	464	210	2693576
17	17.2	4.2	2.0	chr3	135965941	135965988	(62329571)	+	(GGCCG)n	Simple_repeat	1	50	(0)	2693593
18	4.0	0.0	0.0	chr3	135966037	135966062	(62329497)	+	(CGGTG)n	Simple_repeat	1	26	(0)	2693594
25186	7.2	0.4	0.5	chr3	136522577	136528385	(61767174)	C	L1PA5	LINE/L1	(7)	6147	344	2694534
22987	7.1	0.7	0.2	chr3	137211032	137217172	(61078387)	+	L1PA6	LINE/L1	3	6153	(1)	2695816
24830	5.8	0.1	0.2	chr3	138517698	138520779	(59774780)	+	L1PA4	LINE/L1	2	3083	(3063)	2697663
26001	6.3	0.8	0.1	chr3	139166484	139172599	(59122960)	C	L1PA6	LINE/L1	(1)	6153	6	2698915
15	13.7	0.0	0.0	chr3	139390232	139390255	(58905304)	+	(GT)n	Simple_repeat	1	24	(0)	2699246
230	23.4	0.0	0.0	chr3	139390282	139390328	(58905231)	C	L2a	LINE/L2	(2)	3424	3378	2699247
23407	6.5	0.3	0.4	chr3	139404563	139410725	(58884834)	+	L1PA6	LINE/L1	3	6136	(18)	2699268
26279	5.8	2.2	0.5	chr3	141295541	141301590	(56993969)	C	L1PA5	LINE/L1	(0)	6154	8	2702079
35	15.0	4.2	4.0	chr3	141486916	141487011	(56808548)	+	G-rich	Low_complexity	1	100	(0)	2702372
22603	6.5	1.4	0.3	chr3	142135407	142141502	(56154057)	C	L1PA6	LINE/L1	(1)	6153	6	2703617
25810	5.5	0.4	0.1	chr3	142475106	142481234	(55814325)	C	L1PA5	LINE/L1	(7)	6147	2	2704184
2024	14.0	0.7	3.2	chr3	142554640	142554953	(55740606)	+	AluJr	SINE/Alu	1	306	(6)	2704296
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
11	15.3	11.4	0.0	chr3	142723949	142723992	(55571567)	+	(CCGCAGGCC)n	Simple_repeat	1	49	(0)	2704607
19	15.0	0.0	0.0	chr3	142724476	142724512	(55571047)	+	G-rich	Low_complexity	1	37	(0)	2704608
17	3.2	2.5	9.8	chr3	142724600	142724639	(55570920)	+	(CCT)n	Simple_repeat	1	41	(0)	2704609
9299	11.5	8.2	4.0	chr3	143557362	143558873	(54736686)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(0)	2705835
23867	6.8	0.5	0.4	chr3	143662334	143668488	(54627071)	+	L1PA5	LINE/L1	4	6151	(3)	2705977
24968	6.8	0.2	0.5	chr3	144614616	144620769	(53674790)	C	L1PA5	LINE/L1	(3)	6151	11	2707299
9899	11.5	5.2	0.6	chr3	144664920	144666426	(53629133)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2707367
9905	12.0	4.2	0.8	chr3	144843512	144845036	(53450523)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	3	2707566
24825	12.9	3.2	0.9	chr3	146285253	146294041	(52001518)	C	L1PA6	LINE/L1	(0)	6154	4	2709401
4665	21.8	2.4	1.7	chr3	146476090	146477101	(51818458)	+	L1PA10	LINE/L1	1	1019	(4856)	2709620
23765	7.3	0.8	0.1	chr3	146477112	146482999	(51812560)	+	L1PA6	LINE/L1	1	5915	(239)	2709621
25543	5.2	0.6	0.1	chr3	146940675	146946795	(51348764)	C	L1PA4	LINE/L1	(2)	6153	4	2710216
24556	7.8	1.5	0.3	chr3	147124206	147130283	(51165276)	C	L1PA5	LINE/L1	(8)	6146	4	2710440
24937	7.6	0.8	0.0	chr3	147593846	147599956	(50695603)	C	L1PA5	LINE/L1	(8)	6319	177	2710988
11313	9.5	0.8	3.1	chr3	149837764	149839381	(48456178)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2714295
6750	20.4	6.2	5.1	chr3	149943811	149945301	(48350258)	C	L1PA5	LINE/L1	(0)	6390	4275	2714468
6989	9.8	0.1	0.3	chr3	149945302	149946320	(48349239)	+	L1P1	LINE/L1	374	1390	(4765)	2714469
303	28.8	5.6	2.5	chr3	150242753	150242873	(48052686)	+	MER117	DNA/hAT-Charlie	66	190	(7)	2714931
24663	6.0	1.0	1.2	chr3	152980702	152986404	(45309155)	+	L1PA5	LINE/L1	478	6154	(0)	2718956
14	7.2	0.0	8.6	chr3	153162083	153162117	(45133442)	+	(GCCCC)n	Simple_repeat	1	35	(0)	2719347
15	14.4	5.0	2.4	chr3	153162495	153162534	(45133025)	+	(CGC)n	Simple_repeat	1	42	(0)	2719348
25316	6.6	0.2	0.0	chr3	153983403	153989527	(44306032)	C	L1PA5	LINE/L1	(4)	6150	14	2720521
18459	6.9	0.4	0.4	chr3	154619380	154623868	(43671691)	+	L1PA5	LINE/L1	11	4497	(1649)	2721426
17825	5.8	0.3	0.1	chr3	156966143	156970320	(41325239)	+	L1PA4	LINE/L1	1	4188	(1958)	2724774
7332	11.9	3.7	0.1	chr3	157424372	157425818	(40869741)	+	THE1A-int	LTR/ERVL-MaLR	1	1645	(6)	2725489
25414	6.6	0.1	0.1	chr3	158034154	158039629	(40255930)	+	L1PA5	LINE/L1	11	5490	(664)	2726288
25513	6.2	0.2	0.0	chr3	159505479	159511616	(38783943)	C	L1PA5	LINE/L1	(6)	6148	1	2728345
22314	7.0	2.0	0.2	chr3	159569171	159575234	(38720325)	C	L1PA6	LINE/L1	(3)	6151	8	2728415
10137	11.8	3.0	0.9	chr3	160469735	160471211	(37824348)	+	THE1C-int	LTR/ERVL-MaLR	1	1508	(72)	2729829
25816	5.8	0.2	0.1	chr3	161190316	161196276	(37099283)	C	L1PA5	LINE/L1	(4)	6150	188	2730969
11067	11.0	1.3	0.1	chr3	162646837	162648397	(35647162)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	2732859
2460	9.9	0.0	0.0	chr3	163892222	163892533	(34403026)	C	AluSx	SINE/Alu	(0)	312	1	2734297
8789	9.7	0.5	0.1	chr3	164786819	164788008	(33507551)	+	L1P1	LINE/L1	12	1206	(4949)	2735370
10914	11.5	0.6	1.4	chr3	164912202	164913790	(33381769)	C	THE1B-int	LTR/ERVL-MaLR	(4)	1576	1	2735543
8755	14.4	6.6	1.2	chr3	165505748	165507233	(32788326)	C	THE1D-int	LTR/ERVL-MaLR	(7)	1573	3	2736333
2171	25.1	1.6	6.3	chr3	165645276	165645861	(32649698)	+	MLT1F2	LTR/ERVL-MaLR	3	560	(0)	2736503
3341	19.5	0.8	2.1	chr3	166518006	166518524	(31777035)	+	L1M1	LINE/L1	108	627	(6938)	2737609
722	4.5	0.0	1.1	chr3	166518549	166518636	(31776923)	+	AluYj4	SINE/Alu	221	307	(4)	2737611
25650	5.7	0.2	0.1	chr3	166617452	166623581	(31671978)	+	L1PA4	LINE/L1	15	6152	(3)	2737726
11445	9.8	1.4	0.9	chr3	168055818	168056984	(30238575)	+	THE1B-int	LTR/ERVL-MaLR	403	1580	(0)	2739531
10881	11.8	2.2	1.7	chr3	168255195	168256816	(30038743)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	2739802
6921	11.7	0.5	0.1	chr3	168896352	168897333	(29398226)	C	THE1D-int	LTR/ERVL-MaLR	(645)	986	1	2740663
15	16.8	1.9	7.3	chr3	170356808	170356861	(27938698)	+	G-rich	Low_complexity	1	55	(0)	2742884
13	14.4	3.2	0.0	chr3	170357188	170357218	(27938341)	+	G-rich	Low_complexity	1	32	(0)	2742885
15	20.3	4.4	0.0	chr3	170357245	170357255	(27938304)	+	GA-rich	Low_complexity	1	46	(0)	2742886
12	18.4	0.0	3.0	chr3	170357256	170357288	(27938271)	+	G-rich	Low_complexity	1	33	(0)	2742887
18	16.9	4.2	2.0	chr3	170357487	170357534	(27938025)	+	(GGC)n	Simple_repeat	1	50	(0)	2742888
13	15.0	0.0	8.9	chr3	170357539	170357583	(27937976)	+	(CTCCC)n	Simple_repeat	1	45	(0)	2742889
10949	9.9	3.5	0.3	chr3	170918286	170919812	(27375747)	+	THE1B-int	LTR/ERVL-MaLR	1	1579	(1)	2743809
23600	7.1	0.6	0.5	chr3	170932918	170939072	(27356487)	C	L1PA5	LINE/L1	(0)	6154	4	2743817
26	17.6	0.0	3.3	chr3	172039625	172039685	(26255874)	+	(GCG)n	Simple_repeat	1	61	(0)	2745520
9316	11.1	9.1	3.6	chr3	174028158	174029647	(24265912)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2748389
23649	6.8	0.9	0.1	chr3	176861315	176867423	(21428136)	+	L1PA5	LINE/L1	5	6154	(0)	2752223
9134	11.2	12.9	0.1	chr3	178989578	178990996	(19304563)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	5	2755460
11488	9.2	1.3	0.7	chr3	180233164	180234732	(18060827)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	2	2757541
11972	8.2	0.1	1.6	chr3	181510037	181511640	(16783919)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2759433
23929	7.1	0.7	0.2	chr3	181585392	181591552	(16704007)	C	L1PA5	LINE/L1	(0)	6154	4	2759560
11174	9.5	5.0	0.6	chr3	185060142	185061701	(13233858)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	2765725
11422	9.2	3.1	1.7	chr3	186683236	186684373	(11611186)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	395	2768763
15651	7.4	1.7	0.2	chr3	187512729	187514886	(10780673)	+	L1P2	LINE/L1	4	2194	(3990)	2770255
554	26.7	1.2	2.9	chr3	187941954	187942123	(10353436)	C	MIRb	SINE/MIR	(99)	169	3	2770998
11088	10.5	2.2	0.3	chr3	190245419	190246968	(8048591)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2774813
10219	13.2	1.5	1.3	chr3	191215361	191216985	(7078574)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	3	2776216
14566	6.4	0.1	0.0	chr3	193609245	193611182	(4684377)	C	L1PA5	LINE/L1	(4212)	1943	3	2779756
9577	15.9	2.0	0.7	chr3	193714032	193715399	(4580160)	+	MSTA-int	LTR/ERVL-MaLR	1	1395	(256)	2779882
1027	9.8	0.0	0.0	chr3	195394539	195394671	(2900888)	+	AluSz6	SINE/Alu	6	138	(174)	2782834
1030	16.5	0.9	12.3	chr3	195394675	195394917	(2900642)	+	AluJr4	SINE/Alu	68	282	(30)	2782835
16	0.0	0.0	0.0	chr3	195394918	195394935	(2900624)	+	(T)n	Simple_repeat	1	18	(0)	2782836
18379	6.3	1.0	0.2	chr3	196380507	196382833	(1912726)	+	L1PA6	LINE/L1	176	2496	(3823)	2784893
15	15.2	0.0	9.4	chr3	196867773	196867825	(1427734)	+	G-rich	Low_complexity	1	53	(0)	2785946
11713	8.9	2.9	0.3	chr3	197359648	197361185	(934374)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2786792
21	17.0	2.2	0.0	chr4	28431	28476	(190186079)	+	(TCTC)n	Simple_repeat	1	47	(0)	2788542
11590	10.1	0.5	1.8	chr4	202358	203838	(190010717)	+	THE1B-int	LTR/ERVL-MaLR	2	1463	(117)	2788760
12	22.6	5.7	1.8	chr4	1513269	1513321	(188701234)	+	(GCGGCCG)n	Simple_repeat	1	56	(0)	2790271
25432	5.3	0.1	0.1	chr4	5480587	5486704	(184727851)	C	L1PA4	LINE/L1	(5)	6150	30	2796654
260	20.6	6.4	1.4	chr4	8594448	8594521	(181620034)	+	MIRb	SINE/MIR	52	129	(139)	2801997
1108	20.5	5.7	3.9	chr4	8594664	8594772	(181619783)	C	MER33	DNA/hAT-Charlie	(0)	324	221	2801998
22	25.1	1.1	4.5	chr4	9691467	9691553	(180523002)	+	(CCGGCC)n	Simple_repeat	1	88	(0)	2803436
17	21.1	4.7	3.0	chr4	9691684	9691747	(180522808)	+	(GCCCCA)n	Simple_repeat	1	67	(0)	2803437
418	28.0	7.7	0.0	chr4	9691991	9692133	(180522422)	+	MIR	SINE/MIR	108	262	(0)	2803438
7512	11.1	1.3	0.3	chr4	13081869	13082999	(177131556)	C	THE1D-int	LTR/ERVL-MaLR	(486)	1145	3	2808767
23853	7.3	0.6	0.3	chr4	13416765	13422917	(176791638)	+	L1PA6	LINE/L1	1	6154	(0)	2809305
10324	11.3	1.3	5.9	chr4	14001803	14003456	(176211099)	+	THE1B-int	LTR/ERVL-MaLR	4	1580	(0)	2810258
12374	9.2	0.8	1.6	chr4	15135234	15136826	(175077729)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2812146
13	16.8	2.8	2.8	chr4	15681302	15681347	(174533208)	+	G-rich	Low_complexity	1	46	(0)	2813056
9889	9.6	12.1	4.2	chr4	16283512	16284960	(173929595)	+	THE1B-int	LTR/ERVL-MaLR	2	1580	(0)	2814069
331	16.7	2.3	6.7	chr4	17512361	17512450	(172702105)	C	MamRep4096	DNA/hAT-Tip100	(275)	151	66	2816350
14	18.4	2.7	0.0	chr4	17811198	17811234	(172403321)	+	(CCCGGC)n	Simple_repeat	1	38	(0)	2816977
181	22.7	2.2	0.0	chr4	17811317	17811360	(172403195)	C	MIRc	SINE/MIR	(135)	133	89	2816978
10232	14.5	1.7	0.2	chr4	19783085	19784690	(170429865)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	3	2820039
25	10.7	0.0	0.0	chr4	20251997	20252036	(169962519)	+	(GGC)n	Simple_repeat	1	40	(0)	2820693
24299	6.3	0.6	0.1	chr4	20716349	20722473	(169492082)	C	L1PA5	LINE/L1	(0)	6154	1	2821330
23133	7.1	1.4	1.1	chr4	20738626	20744778	(169469777)	+	L1PA5	LINE/L1	7	6152	(2)	2821349
10307	11.1	3.5	3.7	chr4	23079440	23081021	(167133534)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	2825022
849	17.8	0.0	0.0	chr4	25223697	25223831	(164990724)	+	FLAM_C	SINE/Alu	1	135	(8)	2828528
914	20.6	0.0	2.7	chr4	25223832	25223883	(164990672)	+	AluJr	SINE/Alu	122	173	(139)	2828529
3505	12.0	5.9	10.9	chr4	25223884	25224596	(164989959)	C	LTR76	LTR/ERV1	(0)	675	1	2828530
25314	6.8	0.7	0.1	chr4	26693922	26700024	(163514531)	+	L1PA5	LINE/L1	11	6153	(1)	2831468
23845	7.1	0.7	0.1	chr4	26970254	26976379	(163238176)	C	L1PA6	LINE/L1	(6)	6321	178	2831908
9781	12.8	3.4	3.9	chr4	29705975	29707555	(160507000)	C	THE1D-int	LTR/ERVL-MaLR	(6)	1574	1	2835760
11108	10.9	1.4	0.0	chr4	30416093	30417647	(159796908)	+	THE1B-int	LTR/ERVL-MaLR	1	1577	(3)	2836680
17	24.9	4.3	5.1	chr4	37801989	37802082	(152412473)	+	(ATA)n	Simple_repeat	1	98	(0)	2846712
321	29.3	19.2	0.9	chr4	37802093	37802309	(152412246)	C	MIRb	SINE/MIR	(0)	268	3	2846713
26445	5.2	0.4	0.1	chr4	38442788	38448926	(151765629)	C	L1PA4	LINE/L1	(0)	6155	1	2847795
26350	5.3	1.5	0.1	chr4	38476494	38482542	(151732013)	+	L1PA5	LINE/L1	11	6147	(7)	2847848
404	31.2	10.2	12.1	chr4	38661145	38661538	(151553017)	C	L2c	LINE/L2	(0)	3209	2781	2848191
1766	13.9	5.2	1.0	chr4	38661737	38662031	(151552524)	C	AluSz6	SINE/Alu	(0)	312	5	2848193
19	0.0	0.0	0.0	chr4	38752955	38752975	(151461580)	+	(T)n	Simple_repeat	1	21	(0)	2848352
9245	15.4	4.7	0.5	chr4	42802039	42803600	(147410955)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	2	2856108
863	17.6	1.2	0.2	chr4	49090455	49091234	(141123321)	+	ALR/Alpha	Satellite/centr	1	788	(0)	2864886
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
14	13.7	0.0	5.6	chr4	49289254	49289289	(140925266)	+	(TTTTGC)n	Simple_repeat	1	36	(0)	2865068
1804	12.9	6.2	0.0	chr4	49289292	49289578	(140924977)	C	L1PA10	LINE/L1	(0)	6168	5863	2865069
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
765	23.2	4.1	11.8	chr4	49510094	49510415	(140704140)	C	L1MB8	LINE/L1	(43)	6135	5840	2865174
69	6.2	0.0	0.0	chr4	49510486	49510569	(140703986)	+	(TCCT)n	Simple_repeat	1	84	(0)	2865175
406	18.9	2.2	0.5	chr4	49573746	49573848	(140640707)	+	MSTA	LTR/ERVL-MaLR	4	113	(262)	2865274
271	21.9	1.9	0.4	chr4	49573937	49574021	(140640534)	+	THE1D-int	LTR/ERVL-MaLR	959	1064	(587)	2865275
839	22.6	15.8	2.1	chr4	49573984	49574223	(140640332)	C	THE1D-int	LTR/ERVL-MaLR	(398)	1233	955	2865276
867	26.6	5.5	4.6	chr4	49574228	49574534	(140640021)	+	MSTA	LTR/ERVL-MaLR	76	385	(43)	2865274
285	26.1	0.0	1.8	chr4	49577533	49577634	(140636921)	C	HSAT5	Satellite	(1)	100	1	2865283
639	7.7	0.0	0.6	chr4	49577855	49577952	(140636603)	C	HSAT5	Satellite	(3)	97	1	2865284
25677	7.6	0.2	0.0	chr4	51985081	51990520	(138224035)	C	L1P1	LINE/L1	(673)	5481	34	2865562
21	18.9	2.1	0.0	chr4	52038234	52038281	(138176274)	+	(GCC)n	Simple_repeat	1	49	(0)	2865622
23779	7.2	0.6	0.5	chr4	52165192	52171337	(138043218)	C	L1PA5	LINE/L1	(2)	6152	2	2865806
22006	8.0	0.5	0.3	chr4	52458977	52464098	(137750457)	+	L1P1	LINE/L1	11	5134	(1012)	2866216
25613	6.6	0.5	0.1	chr4	53213661	53219784	(136994771)	C	L1PA5	LINE/L1	(1)	6153	1	2867406
23519	7.7	0.4	0.1	chr4	53339990	53346107	(136868448)	+	L1PA6	LINE/L1	11	6149	(5)	2867557
24758	5.3	0.6	0.0	chr4	55041312	55047425	(135167130)	+	L1PA4	LINE/L1	8	6154	(1)	2870281
25880	6.1	1.0	0.3	chr4	56712646	56718770	(133495785)	+	L1PA5	LINE/L1	4	6153	(1)	2873112
18047	5.6	2.2	0.6	chr4	56884323	56885537	(133329018)	+	L1PA6	LINE/L1	177	1431	(4926)	2873551
10818	11.0	1.8	2.7	chr4	57126848	57128439	(133086116)	+	THE1B-int	LTR/ERVL-MaLR	4	1580	(0)	2874012
24481	5.7	0.3	0.0	chr4	57531854	57537985	(132676570)	C	L1PA4	LINE/L1	(0)	6155	7	2874629
24616	7.4	0.6	0.0	chr4	60695877	60701951	(129512604)	+	L1PA5	LINE/L1	39	6150	(4)	2878449
25057	6.3	0.5	0.1	chr4	61011662	61017788	(129196767)	+	L1PA4	LINE/L1	9	6154	(1)	2878844
24673	6.6	0.8	0.2	chr4	61018569	61024158	(129190397)	+	L1PA5	LINE/L1	537	6149	(5)	2878845
10937	10.3	1.9	0.1	chr4	61322332	61323882	(128890673)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2879261
25079	5.8	0.6	1.1	chr4	61754619	61760805	(128453750)	C	L1PA4	LINE/L1	(0)	6155	1	2879842
25251	6.7	0.5	0.1	chr4	62309261	62315383	(127899172)	+	L1PA4	LINE/L1	1	6151	(4)	2880625
19348	5.6	0.2	0.4	chr4	63178835	63182139	(127032416)	C	L1PA4	LINE/L1	(0)	6155	2857	2881725
12447	8.9	0.5	1.3	chr4	63182134	63183877	(127030678)	+	L1P1	LINE/L1	386	2116	(4039)	2881726
24852	6.8	0.5	0.1	chr4	63333602	63339723	(126874832)	+	L1PA4	LINE/L1	1	6152	(3)	2881891
13	18.2	0.0	4.9	chr4	65670313	65670353	(124544202)	+	(GCTGAGG)n	Simple_repeat	1	41	(0)	2884662
10367	10.8	8.0	0.3	chr4	67322601	67324058	(122890497)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	2886755
11093	13.2	6.0	1.7	chr4	68118874	68120376	(122094179)	+	Tigger1	DNA/TcMar-Tigger	442	2023	(395)	2887916
23848	7.2	1.3	0.0	chr4	68420254	68426333	(121788222)	+	L1PA6	LINE/L1	4	6152	(2)	2888341
3273	12.7	0.7	0.1	chr4	68720495	68721028	(121493527)	+	L1PA4	LINE/L1	3	673	(5482)	2888644
859	9.5	0.0	0.0	chr4	68720947	68721062	(121493493)	C	L1P1	LINE/L1	(5573)	582	467	2888645
5186	7.3	0.1	0.0	chr4	68721055	68721762	(121492793)	+	L1PA4	LINE/L1	2834	3542	(2604)	2888644
24620	8.3	0.2	0.3	chr4	68768213	68774369	(121440186)	C	L1PA5	LINE/L1	(3)	6151	2	2888687
8954	14.6	1.8	4.8	chr4	68806737	68808366	(121406189)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2888723
10118	11.6	2.3	2.8	chr4	69709477	69711061	(120503494)	C	THE1B-int	LTR/ERVL-MaLR	(4)	1576	1	2889682
10673	12.1	0.8	0.8	chr4	69806878	69808458	(120406097)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2889800
23910	7.5	0.6	0.2	chr4	70207216	70213358	(120001197)	C	L1PA6	LINE/L1	(0)	6154	1	2890325
24457	5.7	0.3	0.5	chr4	71012179	71017935	(119196620)	+	L1PA5	LINE/L1	399	6148	(6)	2891659
24934	5.4	0.2	0.0	chr4	71084406	71090496	(119124059)	C	L1PA4	LINE/L1	(2)	6153	49	2891764
24703	4.9	0.5	0.8	chr4	71175207	71181371	(119033184)	+	L1PA4	LINE/L1	1	6148	(7)	2891884
15121	7.8	0.5	0.1	chr4	71996335	72000000	(118214555)	+	L1P2	LINE/L1	280	3945	(2201)	2892944
11041	10.7	2.1	0.1	chr4	72254855	72256397	(117958158)	+	THE1A-int	LTR/ERVL-MaLR	5	1580	(0)	2893273
8352	10.4	0.5	0.2	chr4	72632054	72633217	(117581338)	+	L1P1	LINE/L1	2	1169	(4986)	2893753
16318	11.7	0.7	2.6	chr4	72730383	72736061	(117478494)	+	L1PA5	LINE/L1	11	5528	(626)	2893880
15913	7.8	0.8	0.0	chr4	73290079	73293229	(116921326)	C	L1PA7	LINE/L1	(2981)	3165	4	2894702
15872	8.3	1.0	0.5	chr4	73319411	73320851	(116893704)	+	L1PA5	LINE/L1	2	1453	(4702)	2894743
24987	6.9	0.9	0.0	chr4	73360156	73366246	(116848309)	+	L1PA5	LINE/L1	11	6154	(0)	2894798
15366	8.6	1.5	0.2	chr4	75313478	75317758	(114896797)	+	L1PA5	LINE/L1	4	4328	(1818)	2897306
24	17.9	3.5	0.0	chr4	77075446	77075502	(113139053)	+	(CCT)n	Simple_repeat	1	59	(0)	2900311
4604	12.4	1.2	1.0	chr4	77320980	77321655	(112892900)	C	THE1B-int	LTR/ERVL-MaLR	(421)	1159	483	2900641
24576	7.2	1.1	0.5	chr4	77458617	77464738	(112749817)	C	L1PA6	LINE/L1	(6)	6321	174	2900750
30	0.0	0.0	0.0	chr4	77819050	77819075	(112395480)	+	(AC)n	Simple_repeat	1	26	(0)	2901221
25469	5.8	0.3	0.1	chr4	78112833	78118967	(112095588)	C	L1PA4	LINE/L1	(6)	6149	1	2901709
24271	6.7	0.2	0.1	chr4	78271319	78277463	(111937092)	C	L1PA5	LINE/L1	(5)	6149	1	2901932
22326	7.6	0.3	0.3	chr4	78501722	78506887	(111707668)	C	L1PA6	LINE/L1	(993)	5153	2	2902230
23952	7.6	0.3	0.6	chr4	80669984	80676175	(109538380)	C	L1PA6	LINE/L1	(0)	6154	1	2905108
8686	11.2	1.2	1.4	chr4	81608647	81610761	(108603794)	+	L1PA16	LINE/L1	4048	6157	(9)	2906374
26125	5.5	0.1	0.1	chr4	82175411	82181538	(108033017)	+	L1PA4	LINE/L1	9	6139	(16)	2907208
12041	8.8	0.2	0.4	chr4	82317240	82318822	(107895733)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	2907413
19	30.4	3.9	1.9	chr4	82900921	82901024	(107313531)	+	(GCGTG)n	Simple_repeat	1	108	(0)	2908437
25758	6.7	0.6	0.3	chr4	83164063	83170208	(107044347)	+	L1PA5	LINE/L1	6	6154	(0)	2909001
24615	5.4	0.7	1.1	chr4	84987207	84993388	(105221167)	+	L1PA4	LINE/L1	1	6152	(3)	2911944
13648	8.3	0.5	2.4	chr4	85194762	85196651	(105017904)	C	L1PA6	LINE/L1	(4326)	1858	5	2912216
20471	15.9	2.9	1.8	chr4	85196662	85198143	(105016412)	C	L1M1	LINE/L1	(3757)	3808	2325	2912214
16890	6.9	0.9	0.1	chr4	86654382	86657369	(103557186)	C	L1P1	LINE/L1	(3132)	3014	1	2914174
23587	6.5	2.8	0.0	chr4	86728678	86730934	(103483621)	C	L1PA6	LINE/L1	(3825)	2321	9	2914280
2326	11.9	0.6	0.0	chr4	87691661	87691971	(102522584)	+	AluSq	SINE/Alu	1	313	(0)	2915933
10898	9.1	0.9	9.3	chr4	87691972	87693180	(102521375)	+	THE1B-int	LTR/ERVL-MaLR	382	1580	(0)	2915932
11001	9.8	0.6	6.1	chr4	87724723	87726386	(102488169)	+	THE1B-int	LTR/ERVL-MaLR	1	1572	(8)	2915972
10268	11.5	5.1	3.0	chr4	88119344	88120888	(102093667)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2916581
5925	10.8	5.1	6.8	chr4	88221349	88222330	(101992225)	+	THE1C-int	LTR/ERVL-MaLR	1	964	(616)	2916772
1514	13.2	4.5	3.6	chr4	88538843	88538945	(101675610)	C	MLT1B	LTR/ERVL-MaLR	(212)	178	80	2917349
22641	6.9	1.1	0.2	chr4	88538951	88545052	(101669503)	+	L1PA6	LINE/L1	5	6143	(11)	2917351
10526	13.0	1.6	2.0	chr4	89036014	89037649	(101176906)	+	MSTA-int	LTR/ERVL-MaLR	3	1631	(0)	2918037
5502	16.7	5.1	2.6	chr4	89575282	89576564	(100637991)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	2918832
6573	13.1	0.4	0.0	chr4	89856131	89857102	(100357453)	+	L1P1	LINE/L1	1	976	(5179)	2919219
367	36.7	7.7	3.0	chr4	90079205	90079637	(100134918)	C	L2	LINE/L2	(490)	2929	2475	2919511
24333	7.6	1.5	0.1	chr4	91077534	91083566	(99130989)	+	L1PA6	LINE/L1	47	6150	(4)	2920772
25045	7.3	1.2	0.4	chr4	91376762	91382855	(98831700)	C	L1PA5	LINE/L1	(4)	6150	3	2921096
24988	7.2	0.2	0.1	chr4	91462375	91468513	(98746042)	+	L1PA5	LINE/L1	3	6152	(2)	2921183
25995	5.3	0.6	0.0	chr4	91858349	91864459	(98350096)	C	L1PA4	LINE/L1	(11)	6144	1	2921619
25185	6.1	0.5	0.1	chr4	92916366	92922491	(97292064)	C	L1PA4	LINE/L1	(5)	6150	1	2922916
25654	5.9	0.4	0.2	chr4	92938564	92944694	(97269861)	C	L1PA4	LINE/L1	(0)	6155	13	2922933
24490	5.8	0.1	0.3	chr4	94309126	94315291	(95899264)	C	L1PA4	LINE/L1	(3)	6152	1	2924809
12839	11.9	0.6	2.5	chr4	97137209	97139631	(93074924)	C	HERVH-int	LTR/ERV1	(4997)	2716	20	2928559
24810	7.4	0.6	0.4	chr4	97777928	97784080	(92430475)	+	L1PA5	LINE/L1	1	6154	(0)	2929336
476	23.5	12.4	4.5	chr4	99362701	99362878	(90851677)	+	LTR50	LTR/ERVL	9	202	(593)	2931601
333	27.6	12.3	4.2	chr4	99363061	99363253	(90851302)	+	LTR33A	LTR/ERVL	310	520	(0)	2931602
18	23.7	0.0	0.0	chr4	99363320	99363359	(90851196)	+	(T)n	Simple_repeat	1	40	(0)	2931603
24009	6.2	0.8	0.1	chr4	99792656	99798764	(90415791)	C	L1PA5	LINE/L1	(4)	6150	1	2932130
4415	23.9	10.8	4.5	chr4	102860441	102861387	(87353168)	C	L1M3c	LINE/L1	(5091)	2405	1356	2936257
1084	19.9	0.9	2.7	chr4	102867595	102867815	(87346740)	+	AluJo	SINE/Alu	85	301	(11)	2936279
885	11.9	11.6	0.0	chr4	102867845	102868012	(87346543)	+	MER30	DNA/hAT-Charlie	41	230	(0)	2936280
9229	11.7	10.4	2.8	chr4	102877082	102878153	(87336402)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	541	2936296
16731	7.4	2.0	0.2	chr4	102968559	102972366	(87242189)	+	L1P2	LINE/L1	3	3865	(2281)	2936432
205	28.6	2.5	0.0	chr4	103198061	103198137	(87016418)	C	MIR3	SINE/MIR	(16)	192	114	2936744
10477	14.4	1.1	0.1	chr4	103359422	103361036	(86853519)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	2936944
11790	8.8	2.4	0.1	chr4	104960331	104961909	(85252646)	C	L1P2	LINE/L1	(4565)	1619	3	2938869
17380	7.2	3.1	0.1	chr4	105408932	105413479	(84801076)	+	L1PA6	LINE/L1	5	6152	(2)	2939426
25689	5.5	0.4	0.0	chr4	105860131	105866235	(84348320)	+	L1PA4	LINE/L1	11	6139	(16)	2940103
25330	6.4	0.1	0.0	chr4	106558089	106564232	(83650323)	C	L1PA4	LINE/L1	(0)	6155	7	2940991
24647	5.3	0.6	0.0	chr4	107672083	107678199	(82536356)	+	L1PA4	LINE/L1	3	6155	(0)	2942368
24834	6.6	1.1	0.4	chr4	109775046	109781152	(80433403)	+	L1PA5	LINE/L1	4	6147	(7)	2945526
26640	5.1	0.3	0.0	chr4	110321836	110327953	(79886602)	C	L1PA4	LINE/L1	(17)	6138	2	2946438
26024	5.3	0.3	0.0	chr4	111094644	111100776	(79113779)	C	L1PA4	LINE/L1	(0)	6155	1	2947460
715	25.2	3.5	7.5	chr4	112220173	112220412	(77994143)	+	MamRep38	DNA/hAT	20	249	(46)	2948877
24913	5.7	0.2	0.0	chr4	112303776	112309596	(77904959)	C	L1PA5	LINE/L1	(26)	6128	297	2949004
12110	8.9	0.2	0.0	chr4	112490097	112491673	(77722882)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2949250
10378	10.7	4.3	0.7	chr4	113984685	113986207	(76228348)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	2951533
11430	10.1	0.6	0.1	chr4	114123349	114124919	(76089636)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2951709
26744	5.7	0.2	0.1	chr4	118403703	118409837	(71804718)	+	L1PA4	LINE/L1	11	6152	(3)	2956872
16743	7.1	1.7	0.1	chr4	121000001	121002150	(69212405)	C	L1P2	LINE/L1	(3998)	2186	1	2960493
23298	7.5	1.0	0.6	chr4	121616232	121622378	(68592177)	+	L1PA6	LINE/L1	7	6153	(1)	2961303
23	26.4	1.0	5.0	chr4	121697004	121697102	(68517453)	+	(CGGCC)n	Simple_repeat	1	100	(0)	2961412
22	0.0	4.7	6.7	chr4	121697478	121697520	(68517035)	+	(TTGTT)n	Simple_repeat	1	45	(0)	2961413
10499	10.2	3.9	4.3	chr4	123656021	123657607	(66556948)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	2964337
11040	8.1	0.1	0.1	chr4	126029752	126031228	(64183327)	+	L1PA4	LINE/L1	7	1483	(4672)	2967373
16969	11.3	2.1	0.2	chr4	126669746	126675724	(63538831)	+	L1PA6	LINE/L1	174	6325	(2)	2968110
25118	4.9	0.2	0.0	chr4	128431507	128437643	(61776912)	C	L1PA4	LINE/L1	(1)	6154	8	2970724
25556	5.8	0.2	0.0	chr4	129870739	129876882	(60337673)	C	L1PA4	LINE/L1	(0)	6155	5	2972705
8533	13.9	4.1	4.3	chr4	130523343	130524620	(59689935)	C	THE1B-int	LTR/ERVL-MaLR	(1)	1579	329	2973503
8967	14.4	5.7	0.7	chr4	130869827	130871322	(59343233)	+	THE1D-int	LTR/ERVL-MaLR	5	1580	(0)	2973920
453	28.1	7.7	11.5	chr4	131494150	131494271	(58720284)	C	L1MEd	LINE/L1	(5057)	2046	1917	2974669
4738	13.4	0.3	1.7	chr4	131494277	131494619	(58719936)	C	THE1D-int	LTR/ERVL-MaLR	(896)	735	261	2974671
2063	16.1	0.3	0.0	chr4	131494620	131494924	(58719631)	C	AluSx	SINE/Alu	(6)	306	1	2974672
10153	13.9	1.4	2.2	chr4	132942437	132943931	(57270624)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	151	2976409
6061	16.0	1.4	0.8	chr4	134816454	134817480	(55397075)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	547	2978571
1568	14.6	2.5	0.4	chr4	134817467	134817735	(55396820)	+	LTR77	LTR/ERV1	348	622	(0)	2978572
10982	9.0	0.1	0.1	chr4	135110906	135112398	(55102157)	C	L1PA8	LINE/L1	(4653)	1502	11	2978874
26538	5.8	0.3	0.7	chr4	140782681	140788847	(49425708)	C	L1PA5	LINE/L1	(3)	6151	11	2986782
11362	9.6	1.4	0.4	chr4	141050316	141051877	(49162678)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	2	2987185
15497	9.7	0.7	0.8	chr4	141367013	141368858	(48845697)	C	L1PA5	LINE/L1	(4318)	1837	1	2987595
25949	5.2	0.1	0.3	chr4	141833623	141839786	(48374769)	+	L1PA4	LINE/L1	2	6153	(2)	2988195
23519	7.3	1.0	0.1	chr4	144482471	144488573	(45725982)	+	L1PA6	LINE/L1	182	6327	(0)	2991645
18044	6.6	1.4	0.1	chr4	145457543	145462069	(44752486)	+	L1PA5	LINE/L1	4	4577	(1569)	2992937
22452	7.2	0.8	0.1	chr4	145574345	145580475	(44634080)	+	L1PA6	LINE/L1	1	6151	(3)	2993116
23299	7.1	1.2	0.2	chr4	145591321	145597421	(44617134)	C	L1PA5	LINE/L1	(0)	6154	4	2993138
10357	10.0	2.7	6.4	chr4	146596970	146598612	(43615943)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	2994546
12186	9.5	1.6	1.2	chr4	147255045	147256750	(42957805)	+	L1PA5	LINE/L1	4	1716	(4468)	2995369
10977	10.5	2.6	0.1	chr4	148636755	148638295	(41576260)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	2997382
11772	9.9	1.0	0.1	chr4	152144908	152146471	(38068084)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	2	3002526
10997	10.3	1.5	0.1	chr4	153866940	153868429	(36346126)	+	THE1B-int	LTR/ERVL-MaLR	1	1512	(68)	3005277
14699	7.0	0.1	0.1	chr4	155018745	155021717	(35192838)	C	L1PA5	LINE/L1	(2967)	3179	204	3006842
2550	13.3	0.2	0.2	chr4	159586272	159586669	(30627886)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1234	3013131
6378	15.5	1.1	1.1	chr4	159586654	159587694	(30626861)	C	MSTA-int	LTR/ERVL-MaLR	(589)	1042	2	3013131
25560	6.7	0.1	0.0	chr4	159929071	159935208	(30279347)	C	L1PA4	LINE/L1	(4)	6151	11	3013533
295	15.2	0.0	0.0	chr4	159972429	159972474	(30242081)	C	MSTA	LTR/ERVL-MaLR	(0)	428	383	3013570
4327	18.2	0.7	0.4	chr4	159972465	159973227	(30241328)	C	MSTA-int	LTR/ERVL-MaLR	(886)	765	1	3013571
10441	13.6	0.9	1.0	chr4	161226740	161228372	(28986183)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	3015068
25428	6.5	0.5	0.0	chr4	163719034	163725152	(26489403)	C	L1PA5	LINE/L1	(3)	6151	2	3018443
6940	10.1	5.5	0.2	chr4	166374374	166375365	(23839190)	C	L1PA6	LINE/L1	(5136)	1048	1	3022313
24629	7.6	0.2	0.1	chr4	166743490	166749649	(23464906)	+	L1PA5	LINE/L1	178	6327	(0)	3022737
10735	12.8	1.7	0.2	chr4	168202728	168204334	(22010221)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	3024496
2442	4.8	0.7	5.1	chr4	168479687	168480002	(21734553)	+	AluY	SINE/Alu	1	302	(9)	3024871
1229	5.4	0.0	0.0	chr4	169317999	169318145	(20896410)	+	HERVL-int	LTR/ERVL	2190	2336	(3318)	3026156
25688	6.1	0.3	0.2	chr4	169318146	169323847	(20890708)	+	L1PA5	LINE/L1	449	6154	(0)	3026157
23864	7.2	1.7	0.8	chr4	169448686	169453420	(20761135)	+	L1PA6	LINE/L1	177	4921	(1398)	3026356
26211	4.7	0.3	0.3	chr4	169495542	169500000	(20714555)	C	L1PA4	LINE/L1	(1132)	5014	549	3026408
4214	8.2	0.0	0.0	chr4	169500001	169500548	(20714007)	C	L1P1	LINE/L1	(5607)	548	1	3026410
26211	5.0	0.1	0.5	chr4	170263279	170269442	(19945113)	C	L1PA4	LINE/L1	(4)	6151	13	3027543
25803	5.4	0.4	0.3	chr4	172296369	172302514	(17912041)	C	L1PA4	LINE/L1	(6)	6149	4	3030081
2058	15.0	0.0	1.1	chr4	172734420	172734758	(17479797)	C	THE1-int	LTR/ERVL-MaLR	(212)	1439	1073	3030661
6555	11.3	3.0	0.3	chr4	172734719	172735646	(17478909)	+	THE1B-int	LTR/ERVL-MaLR	627	1580	(0)	3030660
10555	9.4	3.7	5.3	chr4	172862727	172863827	(17350728)	+	THE1B-int	LTR/ERVL-MaLR	496	1580	(0)	3030848
24710	6.9	0.4	0.1	chr4	172912251	172918401	(17296154)	+	L1PA5	LINE/L1	4	6154	(0)	3030893
15	20.5	3.5	8.0	chr4	173168705	173168789	(17045766)	+	G-rich	Low_complexity	1	88	(0)	3031238
17345	7.4	0.7	0.1	chr4	173616935	173619370	(16595185)	C	L1PA6	LINE/L1	(3711)	2435	5	3031861
24988	6.6	1.6	0.1	chr4	173962947	173969035	(16245520)	C	L1PA5	LINE/L1	(1)	6153	4	3032333
23373	7.6	0.6	0.7	chr4	177017218	177023392	(13191163)	+	L1PA6	LINE/L1	179	6327	(0)	3036324
282	32.9	9.3	10.9	chr4	184994822	184995283	(5219272)	C	L2a	LINE/L2	(1036)	2383	1895	3047500
1444	19.1	3.0	6.8	chr4	185968718	185969335	(4245220)	C	MER57A-int	LTR/ERV1	(3679)	2508	1759	3049000
441	24.3	0.7	4.9	chr4	185969410	185969552	(4245003)	C	MER57A-int	LTR/ERV1	(4384)	1803	1667	3049000
9850	13.1	4.3	0.5	chr4	189887692	189889211	(325344)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	3054374
24611	5.2	1.0	0.0	chr4	189963771	189969847	(244708)	+	L1PA4	LINE/L1	22	6155	(0)	3054468
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
23124	11.8	1.4	0.0	chr4	190108264	190111540	(103015)	C	HERVK-int	LTR/ERVK	(1208)	6328	3007	3054628
261	23.3	0.0	0.0	chr4	190111624	190111683	(102872)	C	HERVK-int	LTR/ERVK	(6716)	718	659	3054629
1729	17.1	1.4	0.3	chr4	190111667	190111959	(102596)	C	HERVK-int	LTR/ERVK	(6840)	696	401	3054629
1218	8.2	0.0	0.0	chr4	190111960	190112106	(102449)	+	AluYh3	SINE/Alu	136	282	(29)	3054630
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
1095	10.4	0.7	0.9	chr4	190180974	190182175	(32380)	+	BSR/Beta	Satellite	1	1199	(0)	3054653
23874	6.6	0.8	0.3	chr5	60129	66259	(181472000)	C	L1PA6	LINE/L1	(7)	6147	6	3055027
10764	11.6	1.7	1.9	chr5	933671	934877	(180603382)	C	MSTA-int	LTR/ERVL-MaLR	(5)	1626	403	3055807
109	19.5	0.7	5.0	chr5	2038871	2039165	(179499094)	+	G-rich	Low_complexity	1	297	(0)	3056891
9641	15.4	1.7	4.7	chr5	5004937	5006615	(176531644)	+	THE1C-int	LTR/ERVL-MaLR	3	1631	(0)	3060035
16993	8.2	1.2	0.6	chr5	10779978	10781229	(170757030)	+	L1P2	LINE/L1	27	1298	(4886)	3067457
10161	11.8	1.0	0.7	chr5	15239634	15241076	(166297183)	+	MSTA-int	LTR/ERVL-MaLR	1	1447	(184)	3073332
4711	16.2	1.8	0.9	chr5	16494761	16495622	(165042637)	+	MSTA-int	LTR/ERVL-MaLR	1	870	(761)	3075076
1643	6.8	0.0	0.0	chr5	16495623	16495812	(165042447)	+	AluYh3	SINE/Alu	104	293	(18)	3075077
26065	5.0	1.1	0.2	chr5	16632669	16638753	(164899506)	C	L1PA4	LINE/L1	(18)	6137	1	3075281
228	20.4	0.0	1.8	chr5	17712604	17712658	(163825601)	C	LTR67B	LTR/ERVL	(35)	585	532	3077132
443	29.4	7.5	1.6	chr5	17712814	17713000	(163825259)	C	LTR67B	LTR/ERVL	(396)	224	26	3077132
2514	9.4	1.1	0.0	chr5	22607316	22607666	(158930593)	C	THE1A	LTR/ERVL-MaLR	(0)	355	1	3083657
6257	13.1	1.8	1.5	chr5	22607667	22608613	(158929646)	+	THE1D-int	LTR/ERVL-MaLR	631	1580	(0)	3083656
20917	8.4	2.5	0.6	chr5	23186153	23192193	(158346066)	+	L1PA6	LINE/L1	1	6154	(0)	3084415
9411	14.4	6.4	0.2	chr5	26410016	26411543	(155126716)	+	THE1C-int	LTR/ERVL-MaLR	3	1631	(0)	3088534
17008	7.6	0.5	0.1	chr5	28951771	28954191	(152584068)	C	L1P1	LINE/L1	(3715)	2431	1	3091789
24956	7.1	1.1	0.1	chr5	28991082	28997161	(152541098)	+	L1PA5	LINE/L1	11	6154	(0)	3091834
15257	8.0	0.1	0.1	chr5	30947759	30949766	(150588493)	+	L1P1	LINE/L1	11	2020	(4135)	3094273
1666	11.7	0.8	0.1	chr5	30949758	30950005	(150588254)	C	L1P1	LINE/L1	(5381)	1089	855	3094274
25119	5.4	0.4	0.3	chr5	30950003	30954130	(150584129)	+	L1PA5	LINE/L1	2047	6154	(0)	3094275
15	20.0	1.9	7.4	chr5	32444368	32444420	(149093839)	+	GA-rich	Low_complexity	1	54	(0)	3096862
3882	11.8	1.8	1.8	chr5	32900213	32900826	(148637433)	C	THE1D-int	LTR/ERVL-MaLR	(2)	1629	1016	3097594
3953	14.8	7.6	3.4	chr5	32900837	32901599	(148636660)	C	THE1D-int	LTR/ERVL-MaLR	(781)	799	2	3097594
10145	10.1	8.0	0.4	chr5	34726927	34728384	(146809875)	+	THE1B-int	LTR/ERVL-MaLR	1	1579	(1)	3100305
26480	5.5	0.3	0.1	chr5	35911740	35917876	(145620383)	+	L1PA4	LINE/L1	1	6152	(3)	3102064
9559	13.1	4.0	0.2	chr5	35981347	35982769	(145555490)	+	MSTA-int	LTR/ERVL-MaLR	153	1631	(0)	3102147
9698	15.4	6.4	0.5	chr5	36012780	36014312	(145523947)	+	THE1D-int	LTR/ERVL-MaLR	3	1631	(0)	3102181
24899	6.5	0.9	0.1	chr5	36184264	36190366	(145347893)	C	L1PA5	LINE/L1	(2)	6152	2	3102399
228	36.0	15.4	1.9	chr5	36940388	36940645	(144597614)	+	L2b	LINE/L2	2914	3212	(175)	3103568
10485	10.4	4.2	0.5	chr5	37136005	37137524	(144400735)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	3103873
8100	8.7	1.9	1.4	chr5	37282818	37283587	(144254672)	C	THE1B-int	LTR/ERVL-MaLR	(297)	1283	497	3104154
1743	9.5	0.0	3.6	chr5	37283581	37283830	(144254429)	+	THE1-int	LTR/ERVL-MaLR	120	360	(1220)	3104156
22477	6.5	0.9	0.5	chr5	37688714	37694840	(143843419)	+	L1PA6	LINE/L1	5	6136	(18)	3104912
25632	6.2	1.0	0.1	chr5	39682521	39688612	(141849647)	C	L1PA5	LINE/L1	(5)	6149	1	3107946
23531	7.7	0.7	0.3	chr5	40468743	40474889	(141063370)	C	L1PA3	LINE/L1	(3)	6152	5	3108970
13	20.5	5.8	1.8	chr5	40797717	40797768	(140740491)	+	(CGCCCGC)n	Simple_repeat	1	55	(0)	3109433
19	23.3	1.4	5.4	chr5	40798198	40798270	(140739989)	+	G-rich	Low_complexity	1	74	(0)	3109434
8910	19.1	1.0	1.0	chr5	40923953	40925603	(140612656)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1651	1	3109690
24384	6.6	0.3	0.1	chr5	41022074	41028195	(140510064)	+	L1PA5	LINE/L1	11	6148	(6)	3109862
23008	7.7	0.4	1.6	chr5	42412312	42418555	(139119704)	C	L1PA6	LINE/L1	(0)	6154	7	3111590
1335	18.4	1.1	11.8	chr5	42740958	42741278	(138796981)	+	MLT2B3	LTR/ERVL	1	292	(223)	3112001
387	35.6	11.9	5.2	chr5	42741283	42741664	(138796595)	+	L2b	LINE/L2	2977	3387	(0)	3112002
17604	7.0	0.2	0.1	chr5	43340770	43344359	(138193900)	+	L1PA2	LINE/L1	2	3594	(2552)	3112938
25274	6.4	0.2	0.3	chr5	43667276	43673422	(137864837)	C	L1PA5	LINE/L1	(4)	6150	11	3113433
11167	12.1	0.7	0.7	chr5	44838512	44840142	(136698117)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	3114755
14805	8.3	1.4	0.3	chr5	50467524	50471398	(131066861)	C	L1P1	LINE/L1	(2226)	3920	3	3116548
25531	5.9	0.2	0.1	chr5	51785151	51791298	(129746961)	C	L1PA4	LINE/L1	(4)	6151	1	3118164
7404	12.8	6.7	0.7	chr5	51944060	51945596	(129592663)	+	THE1D-int	LTR/ERVL-MaLR	3	1631	(0)	3118382
9743	14.0	4.7	0.9	chr5	53507390	53508496	(128029763)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	487	3120372
940	29.2	9.4	6.4	chr5	54459736	54460144	(127078115)	C	LTR33	LTR/ERVL	(80)	435	2	3121748
1520	29.9	5.8	6.8	chr5	54460194	54460856	(127077403)	C	LTR16D1	LTR/ERVL	(17)	658	3	3121750
17	13.1	0.0	0.0	chr5	54534558	54534583	(127003676)	+	(T)n	Simple_repeat	1	26	(0)	3121880
9244	10.7	0.4	0.3	chr5	55012860	55014226	(126524033)	+	L1PA5	LINE/L1	11	1379	(4776)	3122581
25068	6.8	0.6	0.2	chr5	57922855	57928982	(123609277)	+	L1PA5	LINE/L1	1	6154	(0)	3127437
17007	6.3	0.9	0.9	chr5	58605926	58608289	(122929970)	+	L1P2	LINE/L1	1	2352	(3794)	3128327
25530	6.1	0.3	0.6	chr5	60555606	60561646	(120976613)	+	L1PA4	LINE/L1	135	6155	(0)	3131012
24616	5.6	0.2	0.0	chr5	60615160	60621293	(120916966)	+	L1PA4	LINE/L1	1	6149	(6)	3131088
24791	5.2	0.6	0.0	chr5	60875889	60882002	(120656257)	C	L1PA4	LINE/L1	(0)	6155	7	3131466
9160	16.5	5.6	1.3	chr5	62192437	62194016	(119344243)	+	MSTB-int	LTR/ERVL-MaLR	1	1651	(0)	3133335
12	18.0	8.8	4.0	chr5	62306381	62306448	(119231811)	+	(CTCCGCC)n	Simple_repeat	1	74	(0)	3133536
23193	5.7	0.1	0.2	chr5	62655619	62660602	(118877657)	+	L1P1	LINE/L1	1	4977	(1169)	3134179
1240	9.5	0.6	0.6	chr5	63032276	63032455	(118505804)	+	THE1D-int	LTR/ERVL-MaLR	1	180	(1451)	3134660
6577	12.6	1.5	2.5	chr5	63032454	63033445	(118504814)	+	THE1D-int	LTR/ERVL-MaLR	650	1631	(0)	3134660
24336	6.5	0.9	0.2	chr5	66105954	66112079	(115426180)	+	L1PA6	LINE/L1	1	6152	(2)	3138947
25028	7.1	0.4	0.0	chr5	67598337	67604471	(113933788)	C	L1PA5	LINE/L1	(0)	6154	2	3141050
24235	7.1	1.1	0.3	chr5	67660875	67666963	(113871296)	C	L1PA5	LINE/L1	(1)	6153	18	3141124
23459	6.6	0.2	0.5	chr5	68102237	68106325	(113431934)	+	L1PA6	LINE/L1	8	4083	(2063)	3141731
1148	25.5	5.1	1.0	chr5	68690910	68691551	(112846708)	C	L1ME3C	LINE/L1	(520)	5603	4938	3142612
23108	6.5	2.2	0.2	chr5	68691641	68697661	(112840598)	+	L1PA5	LINE/L1	16	6152	(2)	3142614
17	10.4	3.1	0.0	chr5	73378384	73378415	(108159844)	+	(CTCAC)n	Simple_repeat	1	33	(0)	3150395
5147	9.6	0.8	0.1	chr5	74221959	74222657	(107315602)	C	L1P1	LINE/L1	(5155)	1000	297	3151659
742	8.3	0.0	0.0	chr5	74222643	74222738	(107315521)	C	L1P1	LINE/L1	(6057)	98	3	3151659
12395	7.9	0.2	0.4	chr5	74523217	74524799	(107013460)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3152099
25052	6.8	0.9	0.4	chr5	75098287	75103059	(106435200)	C	L1PA5	LINE/L1	(1349)	4797	4	3153073
12263	8.3	0.0	0.4	chr5	75161037	75162622	(106375637)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3153137
212	36.4	7.9	2.1	chr5	75336422	75336612	(106201647)	C	L2	LINE/L2	(640)	2779	2577	3153385
24552	6.9	0.8	0.4	chr5	77500905	77507049	(104031210)	+	L1PA6	LINE/L1	4	6152	(2)	3156740
26465	6.1	0.5	0.0	chr5	78681964	78688078	(102850181)	+	L1PA5	LINE/L1	11	6154	(0)	3158432
280	14.8	11.6	0.0	chr5	78803779	78803839	(102734420)	C	L2b	LINE/L2	(0)	3375	3307	3158636
23983	6.5	0.6	0.1	chr5	80391145	80397265	(101140994)	C	L1PA5	LINE/L1	(0)	6154	2	3161507
24560	6.2	0.7	0.0	chr5	81028684	81034148	(100504111)	+	L1PA5	LINE/L1	4	5491	(663)	3162602
24909	8.2	0.8	0.1	chr5	82454867	82457662	(99080597)	C	L1PA6	LINE/L1	(3313)	3006	184	3164661
22721	7.5	1.6	0.6	chr5	82843968	82848168	(98690091)	C	L1PA6	LINE/L1	(1905)	4414	184	3165199
24263	7.8	1.1	0.1	chr5	82944072	82949420	(98588839)	+	L1PA5	LINE/L1	11	5402	(744)	3165324
2493	7.8	0.0	1.9	chr5	83113616	83113924	(98424335)	C	AluY	SINE/Alu	(7)	304	2	3165517
10240	10.8	3.7	4.1	chr5	83113925	83114824	(98423435)	C	THE1B-int	LTR/ERVL-MaLR	(678)	902	1	3165516
19972	9.9	1.2	0.4	chr5	83127983	83133776	(98404483)	C	L1PA5	LINE/L1	(0)	6154	249	3165540
7467	10.4	5.2	10.7	chr5	83133777	83135108	(98403151)	+	LTR12D	LTR/ERV1	1	1254	(0)	3165541
11626	9.1	0.4	0.1	chr5	83505135	83506709	(98031550)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	3166052
9232	17.4	1.3	0.7	chr5	85849611	85851231	(95687028)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	3169004
9735	15.4	2.3	0.4	chr5	85990280	85991874	(95546385)	+	THE1B-int	LTR/ERVL-MaLR	5	1631	(0)	3169181
25322	6.2	1.0	0.3	chr5	86265810	86271139	(95267120)	C	L1P1	LINE/L1	(763)	5383	11	3169558
2807	19.6	6.0	5.4	chr5	86452174	86452858	(95085401)	C	MER77B	LTR/ERVL	(11)	689	1	3169815
25126	6.9	0.5	0.2	chr5	86725834	86731962	(94806297)	C	L1PA5	LINE/L1	(0)	6154	1	3170173
10470	18.8	3.4	2.8	chr5	86731964	86734459	(94803800)	C	L1MA4A	LINE/L1	(866)	6696	4184	3170170
25473	6.8	0.3	0.1	chr5	87084422	87090565	(94447694)	+	L1PA5	LINE/L1	1	6154	(0)	3170609
434	27.1	2.9	9.8	chr5	87161185	87161368	(94376891)	C	L2c	LINE/L2	(8)	3379	3209	3170711
374	23.4	3.5	9.8	chr5	87161346	87161468	(94376791)	+	L2c	LINE/L2	3271	3385	(2)	3170712
11027	11.6	1.4	0.6	chr5	87318747	87320358	(94217901)	C	MSTA-int	LTR/ERVL-MaLR	(6)	1625	1	3170978
18494	7.6	0.8	0.1	chr5	88305754	88310434	(93227825)	+	L1P2	LINE/L1	3	4698	(1448)	3172147
23911	7.5	0.2	0.1	chr5	88617453	88623600	(92914659)	C	L1PA6	LINE/L1	(4)	6323	182	3172598
1784	19.3	1.0	0.7	chr5	88763646	88763951	(92774308)	C	AluJr	SINE/Alu	(5)	307	1	3172752
25008	7.4	0.6	0.4	chr5	89630173	89636079	(91902180)	C	L1PA5	LINE/L1	(246)	6081	177	3173813
25367	5.7	0.8	0.0	chr5	90039560	90045658	(91492601)	C	L1PA4	LINE/L1	(0)	6155	18	3174257
11351	10.6	0.5	0.0	chr5	90370555	90372125	(91166134)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	2	3174669
25740	6.5	0.5	0.1	chr5	90969740	90975866	(90562393)	+	L1PA5	LINE/L1	175	6327	(0)	3175450
24445	7.0	0.8	0.4	chr5	91555393	91561533	(89976726)	+	L1PA5	LINE/L1	4	6154	(0)	3176448
9836	12.7	3.5	1.7	chr5	92011402	92012952	(89525307)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(0)	3177006
7758	19.8	6.4	0.3	chr5	92065689	92067237	(89471022)	+	MSTB-int	LTR/ERVL-MaLR	1	1651	(0)	3177060
1735	18.8	4.7	0.2	chr5	93008480	93008825	(88529434)	+	MLT1A0	LTR/ERVL-MaLR	1	365	(0)	3178137
11494	10.2	0.6	0.1	chr5	93462487	93464057	(88074202)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3178715
23791	7.2	0.9	0.3	chr5	94132828	94138583	(87399676)	C	L1PA6	LINE/L1	(380)	5947	177	3179475
22657	9.4	0.3	0.4	chr5	94138584	94142584	(87395675)	C	L1PB1	LINE/L1	(46)	6105	2110	3179477
24292	6.6	0.3	0.1	chr5	96361810	96367972	(85170287)	C	L1PA5	LINE/L1	(0)	6154	1	3182460
25800	6.0	0.8	0.0	chr5	97717793	97723895	(83814364)	C	L1PA4	LINE/L1	(1)	6154	1	3184290
23906	6.1	0.3	0.3	chr5	98113451	98119596	(83418663)	+	L1PA5	LINE/L1	1	6150	(4)	3184756
22305	9.7	0.8	2.0	chr5	98742091	98747441	(82790818)	+	L1PA10	LINE/L1	6	5291	(1040)	3185500
23788	7.3	0.6	2.2	chr5	100699906	100705798	(80832461)	+	L1PA6	LINE/L1	367	6148	(6)	3188095
24825	5.7	0.3	0.5	chr5	101524746	101528899	(80009360)	C	L1PA5	LINE/L1	(6)	6148	2024	3189008
14880	8.6	0.7	0.0	chr5	101528903	101530875	(80007384)	+	L1PA5	LINE/L1	1	1987	(4168)	3189008
11258	10.2	1.2	0.1	chr5	106031362	106032923	(75505336)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	3194586
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
13	14.1	0.0	5.7	chr5	107672698	107672732	(73865527)	+	(CCCCTC)n	Simple_repeat	1	35	(0)	3196634
13729	9.8	1.4	3.8	chr5	107718971	107723038	(73815221)	+	L1PA10	LINE/L1	4	3967	(2364)	3196698
28868	5.0	0.1	0.3	chr5	108574884	108577512	(72960747)	C	HERV17-int	LTR/ERV1	(0)	8626	6005	3197822
283	31.4	10.2	4.6	chr5	108727825	108728018	(72810241)	C	MIRb	SINE/MIR	(58)	210	5	3198049
24600	6.8	1.1	1.1	chr5	109208518	109214655	(72323604)	C	L1PA5	LINE/L1	(14)	6140	11	3198703
640	15.9	9.8	0.0	chr5	111091902	111092058	(70446201)	C	L1MC5	LINE/L1	(191)	9113	8940	3200971
9919	11.0	3.3	1.0	chr5	111639225	111640763	(69897496)	+	THE1C-int	LTR/ERVL-MaLR	1	1575	(5)	3201697
22894	7.3	1.4	0.1	chr5	112677336	112679631	(68858628)	C	L1PA6	LINE/L1	(3831)	2315	7	3203101
14602	7.6	1.5	0.4	chr5	113073750	113074883	(68463376)	+	L1PA5	LINE/L1	341	1498	(4686)	3203795
9358	16.3	2.0	1.8	chr5	113364261	113365621	(68172638)	C	MSTA-int	LTR/ERVL-MaLR	(272)	1359	1	3204182
2726	13.8	1.6	5.7	chr5	117713347	117713854	(63824405)	+	LTR76	LTR/ERV1	187	673	(2)	3209952
17767	5.9	0.4	0.0	chr5	118500001	118502912	(63035347)	C	L1P1	LINE/L1	(3222)	2924	1	3210917
10772	12.4	2.3	0.6	chr5	118656893	118658495	(62879764)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	3211115
11597	8.6	1.3	0.4	chr5	118702532	118704097	(62834162)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3211162
25155	7.0	1.0	0.6	chr5	119439180	119445196	(62093063)	+	L1PA6	LINE/L1	134	6149	(5)	3212317
185	30.7	12.4	3.8	chr5	119451994	119452125	(62086134)	C	MER5A	DNA/hAT-Charlie	(27)	162	18	3212326
9541	12.7	3.8	0.8	chr5	119690816	119692281	(61845978)	C	THE1C-int	LTR/ERVL-MaLR	(69)	1511	1	3212636
16849	9.4	1.1	0.7	chr5	119987773	119992292	(61545967)	C	L1PA7	LINE/L1	(1619)	4527	5	3212979
4258	14.2	5.6	7.0	chr5	121331328	121332140	(60206119)	+	THE1C-int	LTR/ERVL-MaLR	3	803	(777)	3214575
608	11.7	4.1	0.0	chr5	121332133	121332226	(60206033)	+	THE1C	LTR/ERVL-MaLR	278	375	(0)	3214575
22665	8.4	0.6	0.3	chr5	121659902	121666048	(59872211)	+	L1PA6	LINE/L1	174	6314	(13)	3214979
503	26.7	7.3	1.9	chr5	122500569	122500774	(59037485)	C	MIR	SINE/MIR	(22)	240	23	3215982
29	14.4	1.8	0.0	chr5	122501087	122501141	(59037118)	+	(TTCCTC)n	Simple_repeat	1	56	(0)	3215983
8833	13.7	4.6	1.4	chr5	122600596	122601713	(58936546)	C	THE1D-int	LTR/ERVL-MaLR	(401)	1179	1	3216111
24280	5.9	0.4	0.1	chr5	123250933	123257062	(58281197)	C	L1PA5	LINE/L1	(3)	6151	5	3217124
13	18.4	5.4	0.0	chr5	123423318	123423354	(58114905)	+	(GCC)n	Simple_repeat	1	39	(0)	3217347
11151	10.4	0.9	0.6	chr5	123731802	123733375	(57804884)	+	THE1-int	LTR/ERVL-MaLR	3	1580	(0)	3217783
9870	12.3	7.0	0.3	chr5	124203250	124204410	(57333849)	+	THE1D-int	LTR/ERVL-MaLR	423	1628	(3)	3218358
25004	6.8	0.5	0.3	chr5	124358253	124364401	(57173858)	+	L1PA5	LINE/L1	4	6149	(5)	3218572
11509	10.1	0.5	0.0	chr5	125252914	125254485	(56283774)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3219813
13518	7.1	1.2	0.6	chr5	125737056	125740553	(55797706)	C	L1PA5	LINE/L1	(2196)	3950	445	3220393
11072	6.5	0.4	0.0	chr5	125740557	125742769	(55795490)	+	L1PA5	LINE/L1	3935	6153	(1)	3220393
504	26.4	1.4	0.0	chr5	126595497	126595640	(54942619)	C	MER5A1	DNA/hAT-Charlie	(0)	166	21	3221484
10099	11.5	3.9	3.9	chr5	127120478	127122058	(54416201)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3222430
23455	6.7	0.7	0.4	chr5	127197143	127203292	(54334967)	+	L1PA6	LINE/L1	174	6326	(1)	3222530
10238	10.3	4.8	1.6	chr5	128503334	128504861	(53033398)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3224225
10593	13.7	1.3	0.2	chr5	128659792	128661403	(52876856)	+	THE1C-int	LTR/ERVL-MaLR	3	1631	(0)	3224404
24193	7.3	0.7	0.1	chr5	128956714	128962493	(52575766)	C	L1PA5	LINE/L1	(3)	6151	353	3224769
24620	7.2	0.6	0.2	chr5	128967766	128973907	(52564352)	C	L1PA6	LINE/L1	(4)	6150	3	3224772
25592	5.7	0.6	0.0	chr5	129285247	129291357	(52246902)	C	L1PA4	LINE/L1	(11)	6317	177	3225170
9736	12.3	3.9	1.2	chr5	130012784	130014320	(51523939)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	3226022
11505	10.0	0.5	0.1	chr5	130746185	130747741	(50790518)	+	THE1A-int	LTR/ERVL-MaLR	1	1562	(18)	3226920
25894	5.4	0.2	0.1	chr5	131028722	131034857	(50503402)	C	L1PA4	LINE/L1	(5)	6150	2	3227250
23189	7.3	0.4	0.8	chr5	131893740	131899064	(49639195)	C	L1P2	LINE/L1	(855)	5291	1	3228682
18490	6.6	0.8	0.1	chr5	132346226	132349908	(49188351)	C	L1P2	LINE/L1	(2451)	3868	174	3229238
509	18.4	5.8	0.9	chr5	132556408	132556522	(48981737)	C	Charlie1b	DNA/hAT-Charlie	(5)	518	398	3229556
535	21.8	12.1	10.1	chr5	132556531	132556749	(48981510)	C	Charlie1	DNA/hAT-Charlie	(2555)	226	3	3229557
1208	16.4	3.1	3.6	chr5	132645889	132646113	(48892146)	+	AluJr	SINE/Alu	87	310	(2)	3229702
1365	25.1	8.8	4.6	chr5	132646200	132646533	(48891726)	+	L2a	LINE/L2	2317	2670	(749)	3229698
549	30.4	11.7	0.5	chr5	133315173	133315377	(48222882)	C	MIR	SINE/MIR	(27)	235	5	3230823
13374	4.7	1.4	0.2	chr5	133851764	133853642	(47684617)	+	L1P2	LINE/L1	528	2413	(3733)	3231477
10056	9.7	0.2	12.1	chr5	135837872	135839664	(45698595)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3234821
21013	5.9	0.4	0.3	chr5	136942482	136947578	(44590681)	C	L1PA4	LINE/L1	(1044)	5102	1	3236312
313	31.6	10.0	2.7	chr5	137889006	137889194	(43649065)	+	MIRb	SINE/MIR	2	211	(57)	3237696
14	14.9	0.0	3.1	chr5	138338358	138338389	(43199870)	+	(CCCT)n	Simple_repeat	1	32	(0)	3238687
21	18.5	0.0	0.0	chr5	139561527	139561569	(41976690)	+	(GGC)n	Simple_repeat	1	43	(0)	3241047
21	8.1	5.1	0.0	chr5	139561727	139561765	(41976494)	+	(CCCCGT)n	Simple_repeat	1	41	(0)	3241048
18	25.5	1.6	1.6	chr5	139561766	139561788	(41976471)	+	(CCCCGC)n	Simple_repeat	1	63	(0)	3241049
625	30.6	11.3	1.6	chr5	139768927	139769301	(41768958)	C	L2b	LINE/L2	(0)	3375	2960	3241485
725	7.3	0.1	0.0	chr5	140451962	140452062	(41086197)	+	L1PA5	LINE/L1	326	413	(6057)	3242667
25614	5.5	0.6	0.1	chr5	140452035	140457861	(41080398)	+	L1PA5	LINE/L1	612	6464	(5)	3242667
14	28.5	3.1	1.5	chr5	142108653	142108717	(39429542)	+	G-rich	Low_complexity	1	67	(0)	3245269
13	4.7	0.0	4.2	chr5	142108931	142108954	(39429305)	+	(GCTC)n	Simple_repeat	1	24	(0)	3245270
528	27.7	10.2	3.9	chr5	142279616	142280024	(39258235)	C	L2c	LINE/L2	(1)	3425	2912	3245625
522	24.8	1.7	0.0	chr5	142280077	142280189	(39258070)	C	MIR	SINE/MIR	(72)	190	76	3245626
11194	11.8	1.0	0.1	chr5	143384311	143385926	(38152333)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	3247574
23867	6.9	0.6	0.1	chr5	144049946	144056062	(37482197)	C	L1PA5	LINE/L1	(7)	6147	1	3248683
26468	5.5	0.2	0.2	chr5	145891148	145897247	(35641012)	+	L1PA4	LINE/L1	174	6278	(50)	3251483
483	28.5	4.5	5.3	chr5	145975732	145975965	(35562294)	+	MIR	SINE/MIR	21	247	(15)	3251632
17928	17.7	2.5	2.9	chr5	148254982	148259908	(33278351)	C	L1PREC2	LINE/L1	(1123)	7018	1	3255600
260	30.7	4.2	2.1	chr5	149450031	149450170	(32088089)	C	MIR3	SINE/MIR	(30)	178	36	3257761
26056	6.2	0.3	0.1	chr5	151389413	151395556	(30142703)	C	L1PA5	LINE/L1	(2)	6152	2	3261784
10788	13.8	1.5	5.0	chr5	151417143	151418832	(30119427)	+	THE1D-int	LTR/ERVL-MaLR	3	1631	(0)	3261826
26924	5.0	0.2	0.2	chr5	155157595	155163743	(26374516)	C	L1PA4	LINE/L1	(1)	6154	1	3268757
24562	5.5	0.3	0.0	chr5	156605056	156611189	(24927070)	C	L1PA4	LINE/L1	(6)	6149	2	3271112
23634	7.2	0.2	0.2	chr5	158438807	158444948	(23093311)	C	L1PA6	LINE/L1	(10)	6144	1	3274607
23907	5.7	0.4	0.5	chr5	160813009	160819161	(20719098)	+	L1PA4	LINE/L1	12	6155	(0)	3278826
11	9.9	5.6	5.3	chr5	163437836	163437871	(18100388)	+	(GGTGCG)n	Simple_repeat	1	38	(0)	3282556
11131	12.8	0.4	1.0	chr5	164104546	164106186	(17432073)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	3283558
9390	12.5	4.9	5.1	chr5	164801513	164802782	(16735477)	C	THE1C-int	LTR/ERVL-MaLR	(305)	1275	1	3284479
10186	11.4	4.2	0.1	chr5	165318444	165319957	(16218302)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3285171
16559	7.3	0.8	0.2	chr5	166099814	166103541	(15434718)	C	L1P2	LINE/L1	(2405)	3741	8	3286268
465	28.1	7.7	0.9	chr5	168485905	168486154	(13052105)	+	L2a	LINE/L2	3113	3426	(0)	3290164
20724	9.5	0.5	1.6	chr5	168630704	168637033	(12901226)	+	L1PA5	LINE/L1	1	6153	(1)	3290464
26371	5.8	0.2	0.0	chr5	169819645	169825775	(11712484)	+	L1PA5	LINE/L1	11	6147	(7)	3292443
24736	6.7	2.7	0.2	chr5	170930428	170936408	(10601851)	C	L1PA5	LINE/L1	(16)	6138	7	3294510
1527	24.4	15.2	2.4	chr5	170936423	170937123	(10601136)	C	L1ME1	LINE/L1	(3188)	2958	2152	3294509
40	23.0	3.5	3.4	chr5	172454482	172454622	(9083637)	+	(GCC)n	Simple_repeat	1	146	(0)	3297474
454	24.1	2.5	0.0	chr5	172454825	172454940	(9083319)	+	MIR	SINE/MIR	36	154	(108)	3297475
355	19.2	3.7	0.0	chr5	172642728	172642805	(8895454)	C	MIR3	SINE/MIR	(90)	118	38	3297900
12	22.4	0.0	2.6	chr5	172771386	172771423	(8766836)	+	(CCGCCCG)n	Simple_repeat	1	38	(0)	3298156
238	31.0	7.4	0.9	chr5	173055974	173056087	(8482172)	+	MIRc	SINE/MIR	108	229	(39)	3298841
15	5.6	0.0	0.0	chr5	173057809	173057827	(8480432)	+	(T)n	Simple_repeat	1	19	(0)	3298844
244	26.0	10.7	2.9	chr5	173201004	173201106	(8337153)	C	MER102c	DNA/hAT-Charlie	(74)	257	146	3299156
24114	8.2	0.8	0.5	chr5	174465905	174472053	(7066206)	+	L1PA6	LINE/L1	5	6149	(5)	3301555
7367	11.2	1.9	0.0	chr5	176272477	176273511	(5264748)	+	L1PA5	LINE/L1	17	1071	(5084)	3304941
12	15.7	2.6	5.0	chr5	176388390	176388428	(5149831)	+	(CCCGGCC)n	Simple_repeat	1	40	(0)	3305144
13	4.8	12.5	3.7	chr5	176630473	176630494	(4907765)	+	(CTCGCGCAG)n	Simple_repeat	1	25	(0)	3305697
27	0.0	0.0	0.0	chr5	176630495	176630520	(4907739)	+	(GCTCCG)n	Simple_repeat	1	26	(0)	3305698
13	4.8	12.5	3.7	chr5	176630521	176630545	(4907714)	+	(CTCGCGCAG)n	Simple_repeat	8	33	(0)	3305699
450	29.1	3.2	8.5	chr5	176630697	176630861	(4907398)	+	MIRb	SINE/MIR	2	157	(111)	3305700
16642	7.5	0.8	0.1	chr5	177635732	177639675	(3898584)	C	L1PA5	LINE/L1	(2164)	3982	11	3307768
215	31.6	9.5	1.3	chr5	178414290	178414366	(3123893)	+	L2b	LINE/L2	3250	3333	(42)	3309130
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
1905	23.6	8.7	2.2	chr5	179749561	179749789	(1788470)	+	HAL1	LINE/L1	1643	1879	(628)	3311513
14	19.7	2.3	3.4	chr5	180861159	180861208	(677051)	+	G-rich	Low_complexity	1	49	(0)	3313359
13	20.9	0.0	0.0	chr5	181159545	181159577	(378682)	+	(TGTT)n	Simple_repeat	1	33	(0)	3313748
728	1.2	0.0	0.0	chr5	181174044	181174125	(364134)	C	tRNA-Leu-CTY	tRNA	(3)	82	1	3313785
2130	4.3	0.7	2.5	chr5	181262211	181262489	(275770)	C	AluY	SINE/Alu	(7)	304	31	3313945
2149	12.0	3.6	0.0	chr6	1810291	1810581	(168995398)	C	AluSx	SINE/Alu	(9)	303	2	3316605
214	33.3	7.5	0.0	chr6	1931849	1931947	(168874032)	C	L2a	LINE/L2	(0)	3426	3320	3316732
426	23.6	4.3	0.0	chr6	1932263	1932372	(168873607)	C	MIRb	SINE/MIR	(42)	226	112	3316733
21801	9.9	0.9	2.8	chr6	2286245	2292695	(168513284)	+	L1PA7	LINE/L1	5	6468	(1)	3317234
51	22.4	3.1	5.0	chr6	2999648	2999841	(167806138)	+	G-rich	Low_complexity	1	200	(0)	3318233
183	28.6	2.0	0.0	chr6	3000305	3000353	(167805626)	C	MIR	SINE/MIR	(88)	174	125	3318234
21	23.4	2.7	2.6	chr6	3157313	3157386	(167648593)	+	(CCAGCC)n	Simple_repeat	1	76	(0)	3318483
15	23.0	0.0	5.4	chr6	3157761	3157816	(167648163)	+	G-rich	Low_complexity	1	56	(0)	3318484
444	28.5	0.8	0.0	chr6	4478246	4478375	(166327604)	+	MIR	SINE/MIR	88	218	(44)	3320507
277	21.1	0.0	0.0	chr6	4777353	4777404	(166028575)	C	Eulor9C	DNA	(62)	208	157	3321056
29	11.3	0.0	0.0	chr6	5260591	5260638	(165545341)	+	(CCCCCGG)n	Simple_repeat	1	48	(0)	3321766
14	3.9	0.0	9.4	chr6	5260985	5261016	(165544963)	+	(GCCCC)n	Simple_repeat	1	32	(0)	3321767
521	29.2	10.3	0.9	chr6	5302957	5303167	(165502812)	C	MIR	SINE/MIR	(4)	258	26	3321831
11355	10.4	3.1	0.3	chr6	6562629	6564213	(164241766)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	3323576
20735	6.1	0.6	0.4	chr6	6668155	6672990	(164132989)	+	L1P2	LINE/L1	1	4824	(1322)	3323732
24790	6.6	1.0	0.5	chr6	7925705	7931830	(162874149)	+	L1PA6	LINE/L1	181	6325	(2)	3325912
23799	6.8	1.2	0.5	chr6	9213496	9216349	(161589630)	+	L1PA6	LINE/L1	9	2865	(3281)	3327795
25296	6.9	0.2	0.1	chr6	9443748	9449876	(161356103)	+	L1PA5	LINE/L1	11	6150	(4)	3328095
25249	6.2	0.6	0.1	chr6	9882324	9888448	(160917531)	+	L1PA5	LINE/L1	11	6153	(1)	3328655
2714	9.2	5.5	0.0	chr6	10021162	10021543	(160784436)	C	L1P2	LINE/L1	(5241)	943	540	3328841
1858	14.4	0.4	0.0	chr6	10021547	10021810	(160784169)	C	AluSz	SINE/Alu	(10)	302	38	3328842
17	0.0	0.0	0.0	chr6	10694904	10694922	(160111057)	+	(T)n	Simple_repeat	1	19	(0)	3330013
18	24.2	7.3	0.0	chr6	11044334	11044417	(159761562)	+	(CG)n	Simple_repeat	1	90	(0)	3330624
22889	6.6	0.7	0.5	chr6	12139363	12145531	(158660448)	+	L1PA6	LINE/L1	1	6154	(0)	3332233
18	20.1	0.0	9.3	chr6	15662681	15662755	(155143224)	+	(GGCGG)n	Simple_repeat	1	75	(0)	3338218
15	30.9	1.4	1.4	chr6	15662984	15663052	(155142927)	+	(CCGGCC)n	Simple_repeat	1	70	(0)	3338219
10058	15.0	2.4	0.4	chr6	16788599	16790190	(154015789)	C	MSTA-int	LTR/ERVL-MaLR	(7)	1624	1	3340057
13	15.4	5.3	2.5	chr6	17393473	17393510	(153412469)	+	(CCT)n	Simple_repeat	1	40	(0)	3341078
14	19.8	1.7	6.7	chr6	17393641	17393699	(153412280)	+	G-rich	Low_complexity	1	60	(0)	3341079
15	30.2	1.6	0.0	chr6	17393764	17393824	(153412155)	+	G-rich	Low_complexity	1	62	(0)	3341080
339	32.9	4.2	0.0	chr6	18091882	18092018	(152713961)	C	MER5A	DNA/hAT-Charlie	(3)	186	44	3342418
2205	13.2	0.0	0.0	chr6	18092019	18092321	(152713658)	C	AluSz	SINE/Alu	(9)	303	1	3342419
19	0.0	0.0	0.0	chr6	18148391	18148414	(152657565)	+	(ATG)n	Simple_repeat	1	24	(0)	3342533
256	33.8	2.2	2.9	chr6	18148427	18148566	(152657413)	C	UCON44	Unknown	(38)	145	7	3342534
454	25.2	12.8	7.6	chr6	18823919	18824154	(151981825)	+	MamGypLTR3a	LTR/Gypsy	627	876	(105)	3343634
24545	6.7	0.1	0.0	chr6	19481742	19487890	(151318089)	+	L1PA5	LINE/L1	1	6153	(1)	3344489
10624	10.7	1.0	6.1	chr6	19515370	19517034	(151288945)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3344520
1086	27.1	6.7	1.4	chr6	19576943	19577201	(151228778)	C	MLT1A-int	LTR/ERVL-MaLR	(169)	1566	1291	3344608
2235	17.6	2.0	9.3	chr6	19577202	19577726	(151228253)	C	MER66B	LTR/ERV1	(0)	486	1	3344610
24713	5.9	0.3	0.1	chr6	25158198	25164309	(145641670)	+	L1PA5	LINE/L1	11	6136	(18)	3353177
957	14.0	0.7	1.3	chr6	25484911	25485060	(145320919)	+	AluJr	SINE/Alu	158	306	(6)	3353703
389	35.6	2.4	0.6	chr6	25501371	25501531	(145304448)	+	MIR	SINE/MIR	73	236	(26)	3353726
1844	15.2	2.6	2.2	chr6	25958727	25959180	(144846799)	+	MER61D	LTR/ERV1	1	490	(11)	3354382
526	17.1	21.5	1.6	chr6	25959186	25959378	(144846601)	+	LTR29	LTR/ERV1	372	595	(0)	3354381
251	22.4	4.9	0.0	chr6	26286054	26286111	(144519868)	+	tRNA-Gly-GGG	tRNA	3	63	(11)	3354952
13	0.0	0.0	0.0	chr6	27754388	27754404	(143051575)	+	(AAT)n	Simple_repeat	1	17	(0)	3357537
258	29.5	0.0	0.0	chr6	27754415	27754475	(143051504)	C	tRNA-Val-GTY	tRNA	(15)	61	1	3357538
17893	6.6	0.5	0.8	chr6	28848453	28849908	(141956071)	+	L1PA5	LINE/L1	181	1642	(4715)	3359337
24913	6.1	1.4	0.1	chr6	29779788	29785823	(141020156)	+	L1PA6	LINE/L1	22	6140	(14)	3360648
26119	6.5	0.2	0.1	chr6	30430281	30436430	(140369549)	+	L1PA6	LINE/L1	2	6154	(0)	3361587
13	17.2	8.7	0.0	chr6	30556132	30556177	(140249802)	+	(TCTGCT)n	Simple_repeat	1	50	(0)	3361797
364	30.6	10.2	2.7	chr6	30781620	30781846	(140024133)	C	MIRc	SINE/MIR	(15)	253	1	3362216
26081	6.7	0.3	0.2	chr6	31254852	31260632	(139545347)	C	L1PA6	LINE/L1	(367)	5960	178	3363099
2066	7.9	7.4	0.4	chr6	31542686	31542962	(139263017)	C	AluSx1	SINE/Alu	(14)	298	1	3363472
1694	14.6	8.8	1.0	chr6	32978506	32978817	(137827162)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	3365695
458	25.1	7.3	3.8	chr6	32978818	32978967	(137827012)	C	MER58A	DNA/hAT-Charlie	(58)	166	10	3365694
584	24.4	7.2	1.6	chr6	34671742	34671924	(136134055)	+	HAL1	LINE/L1	92	285	(2222)	3368873
1860	13.6	5.1	0.4	chr6	34672110	34672388	(136133591)	C	AluSz	SINE/Alu	(19)	293	1	3368874
17448	6.2	0.6	0.3	chr6	35331965	35336436	(135469543)	+	L1P2	LINE/L1	185	4649	(1670)	3370157
15	26.1	0.0	1.9	chr6	35805334	35805385	(135000594)	+	(GGAGCCG)n	Simple_repeat	1	52	(0)	3371201
9508	11.0	11.5	0.3	chr6	35908152	35909597	(134896382)	+	THE1D-int	LTR/ERVL-MaLR	3	1631	(0)	3371418
456	28.5	3.4	7.0	chr6	38974633	38974847	(131831132)	+	L2a	LINE/L2	3214	3420	(6)	3377291
273	28.6	6.2	0.0	chr6	38974885	38974975	(131831004)	C	MIRb	SINE/MIR	(35)	233	137	3377292
18	15.5	0.0	0.0	chr6	41072978	41073013	(129732966)	+	(GGCAGC)n	Simple_repeat	1	36	(0)	3380580
14	15.6	0.0	0.0	chr6	41073192	41073220	(129732759)	+	(GAGCC)n	Simple_repeat	1	29	(0)	3380581
13	11.7	4.9	4.7	chr6	41443311	41443351	(129362628)	+	(CGCCGCCT)n	Simple_repeat	1	43	(0)	3381166
20	21.2	2.8	4.1	chr6	41443482	41443552	(129362427)	+	G-rich	Low_complexity	1	73	(0)	3381167
245	35.8	0.0	2.1	chr6	43054011	43054107	(127751872)	C	MIR3	SINE/MIR	(17)	191	97	3384600
25763	6.6	0.3	0.0	chr6	44747463	44753585	(126052394)	+	L1PA4	LINE/L1	12	6155	(0)	3387720
9769	12.1	2.3	7.5	chr6	44972074	44973649	(125832330)	C	THE1C-int	LTR/ERVL-MaLR	(66)	1514	3	3387977
11392	10.5	0.5	0.0	chr6	45270679	45272250	(125533729)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3388390
25421	5.6	0.4	0.2	chr6	45281108	45287253	(125518726)	+	L1PA4	LINE/L1	2	6154	(1)	3388404
14251	7.8	2.2	0.2	chr6	45306652	45308584	(125497395)	+	L1P1	LINE/L1	3	1976	(4179)	3388436
13	14.9	5.1	2.4	chr6	45377470	45377508	(125428471)	+	(CAGCC)n	Simple_repeat	1	41	(0)	3388537
14	13.7	3.1	0.0	chr6	45377643	45377674	(125428305)	+	G-rich	Low_complexity	1	33	(0)	3388538
25335	6.2	0.2	0.0	chr6	46119458	46125580	(124680399)	+	L1PA5	LINE/L1	11	6146	(8)	3389721
24645	7.2	0.6	0.3	chr6	47327838	47333990	(123471989)	+	L1PA6	LINE/L1	4	6154	(0)	3391581
16318	9.2	1.5	0.2	chr6	49274564	49275259	(121530720)	+	L1PA5	LINE/L1	11	738	(5417)	3394158
7888	9.1	20.8	0.1	chr6	49275260	49276510	(121529469)	+	LTR12C	LTR/ERV1	2	1579	(0)	3394159
7925	13.2	1.1	0.8	chr6	49365831	49367016	(121438963)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	443	3394263
24221	6.5	0.5	0.0	chr6	49598557	49604673	(121201306)	+	L1PA5	LINE/L1	1	6146	(8)	3394638
25346	6.1	0.2	0.0	chr6	50343728	50349871	(120456108)	+	L1PA4	LINE/L1	1	6155	(0)	3395572
24066	7.2	1.1	0.7	chr6	52445516	52448687	(118357292)	C	L1PA5	LINE/L1	(2951)	3195	4	3398545
285	24.5	15.0	0.0	chr6	52577609	52577710	(118228269)	C	L2a	LINE/L2	(14)	3412	3293	3398746
25074	6.4	0.6	0.3	chr6	53382736	53385713	(117420266)	+	L1PA6	LINE/L1	9	2979	(3167)	3400087
24838	7.1	0.2	0.4	chr6	55340548	55346704	(115459275)	+	L1PA5	LINE/L1	11	6154	(0)	3402797
15	9.4	5.6	2.6	chr6	56843474	56843509	(113962470)	+	G-rich	Low_complexity	1	38	(0)	3404689
62	4.5	0.0	0.0	chr6	56843699	56843767	(113962212)	+	(GGAGGGT)n	Simple_repeat	1	69	(0)	3404690
14131	8.1	0.5	0.1	chr6	63359852	63361803	(107444176)	C	L1PA4	LINE/L1	(4194)	1961	2	3410364
24113	7.5	1.5	0.1	chr6	63873004	63879092	(106926887)	C	L1PA5	LINE/L1	(0)	6154	4	3411197
25864	5.7	0.2	0.1	chr6	64091753	64097759	(106708220)	C	L1PA4	LINE/L1	(0)	6155	140	3411474
5401	16.9	2.2	1.9	chr6	64464960	64466870	(106339109)	+	L1MA8	LINE/L1	4354	6268	(23)	3411921
9414	13.7	2.9	3.2	chr6	65088193	65089668	(105716311)	+	THE1D-int	LTR/ERVL-MaLR	1	1507	(73)	3412664
16923	8.2	1.4	0.1	chr6	66166506	66170098	(104635881)	+	L1PA6	LINE/L1	1	3622	(2524)	3413953
5304	21.1	3.9	2.9	chr6	67066036	67066773	(103739206)	C	L1MA4	LINE/L1	(5036)	2529	1767	3415052
2181	10.0	0.0	2.8	chr6	67066774	67067091	(103738888)	C	AluSq2	SINE/Alu	(0)	313	1	3415063
9756	14.8	1.6	4.5	chr6	68121339	68123015	(102682964)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1631	4	3416322
11202	10.2	1.1	0.1	chr6	68845821	68847384	(101958595)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3417188
24895	5.3	0.2	0.1	chr6	69480208	69486354	(101319625)	+	L1PA4	LINE/L1	3	6155	(0)	3417970
12	20.2	2.9	0.0	chr6	70668264	70668297	(100137682)	+	(GGCG)n	Simple_repeat	1	35	(0)	3419586
23415	7.1	1.1	0.4	chr6	70800520	70806617	(99999362)	C	L1PA6	LINE/L1	(3)	6151	26	3419766
17045	9.6	1.9	1.8	chr6	70925176	70931345	(99874634)	+	L1PA5	LINE/L1	4	6154	(0)	3419919
24738	7.4	0.7	0.0	chr6	70974173	70980298	(99825681)	+	L1PA6	LINE/L1	176	6325	(2)	3419971
391	27.0	2.3	8.7	chr6	71072464	71072601	(99733378)	C	MIR3	SINE/MIR	(67)	141	13	3420090
25771	6.0	0.2	0.1	chr6	72006344	72012487	(98793492)	+	L1PA4	LINE/L1	1	6150	(5)	3421322
24110	7.6	0.6	0.3	chr6	72122506	72126122	(98679857)	C	L1PA5	LINE/L1	(2525)	3621	4	3421474
25243	8.5	2.5	0.4	chr6	72157297	72164533	(98641446)	C	L1PA4	LINE/L1	(2)	6153	7	3421519
23061	6.6	0.6	0.6	chr6	72978684	72984846	(97821133)	C	L1PA6	LINE/L1	(6)	6321	177	3422609
39	4.7	0.0	0.0	chr6	73263040	73263084	(97542895)	+	(GGC)n	Simple_repeat	1	45	(0)	3423001
11311	9.6	2.7	0.0	chr6	73844232	73845767	(96960212)	+	THE1A-int	LTR/ERVL-MaLR	2	1580	(0)	3424314
9809	13.4	4.6	0.6	chr6	74622645	74624160	(96181819)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(0)	3425198
14	21.6	0.0	2.5	chr6	75205781	75205820	(95600159)	+	(GGCAGC)n	Simple_repeat	1	40	(0)	3425881
30	30.4	2.2	2.8	chr6	75601788	75601926	(95204053)	+	(GGC)n	Simple_repeat	1	142	(0)	3426464
24367	6.3	1.3	0.6	chr6	75682406	75688529	(95117450)	C	L1PA6	LINE/L1	(0)	6327	177	3426617
9793	13.7	3.0	0.8	chr6	76082204	76083737	(94722242)	C	THE1C-int	LTR/ERVL-MaLR	(12)	1568	1	3427261
6455	13.7	12.0	0.4	chr6	77747668	77748837	(93057142)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	323	3429170
25843	5.6	0.6	0.3	chr6	77862082	77868224	(92937755)	+	L1PA4	LINE/L1	1	6154	(1)	3429331
10880	12.3	0.5	0.3	chr6	78386143	78387719	(92418260)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3429905
23517	8.6	0.6	0.9	chr6	78675974	78678869	(92127110)	+	L1PA6	LINE/L1	177	3020	(3299)	3430281
25004	6.4	0.3	0.5	chr6	78694313	78700460	(92105519)	+	L1PA4	LINE/L1	7	6144	(11)	3430305
3844	12.9	1.9	1.8	chr6	78920263	78920943	(91885036)	+	L1PA15	LINE/L1	5320	6001	(848)	3430582
17112	7.0	0.3	0.0	chr6	78920946	78924807	(91881172)	+	L1PA4	LINE/L1	7	3878	(2268)	3430585
23930	7.1	0.4	0.4	chr6	79347177	79352933	(91453046)	+	L1PA6	LINE/L1	415	6152	(2)	3431115
23869	7.0	0.6	0.1	chr6	79577657	79583766	(91222213)	+	L1PA6	LINE/L1	9	6127	(27)	3431445
22836	7.0	0.5	0.2	chr6	79658146	79664304	(91141675)	C	L1PA6	LINE/L1	(0)	6154	1	3431575
10908	10.8	2.0	0.0	chr6	80292596	80294132	(90511847)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	12	3432463
22484	7.9	0.8	1.0	chr6	80409632	80412091	(90393888)	C	L1PA6	LINE/L1	(3703)	2443	5	3432591
894	25.9	2.1	3.3	chr6	81770013	81770255	(89035724)	+	MIR	SINE/MIR	8	247	(15)	3434212
18134	6.7	0.0	0.5	chr6	82150920	82152109	(88653870)	+	L1PA6	LINE/L1	2	1190	(4994)	3434698
16403	7.1	0.4	0.0	chr6	82500002	82502582	(88303397)	C	L1P1	LINE/L1	(3555)	2591	3	3435248
8663	11.7	10.2	3.1	chr6	82930349	82931859	(87874120)	+	THE1C-int	LTR/ERVL-MaLR	8	1631	(0)	3435808
16218	7.5	0.3	0.1	chr6	83495671	83500000	(87305979)	+	L1P1	LINE/L1	11	4353	(1793)	3436622
16719	8.3	1.3	0.6	chr6	84129752	84133988	(86671991)	C	L1PA7	LINE/L1	(1887)	4259	8	3437461
11003	12.8	5.5	0.3	chr6	85032838	85034383	(85771596)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	1	3438557
9851	7.0	5.8	0.0	chr6	85313777	85315063	(85490916)	C	L1PA6	LINE/L1	(4818)	1366	1	3438857
15826	8.1	0.2	0.0	chr6	85377221	85380046	(85425933)	+	L1P1	LINE/L1	19	2849	(3297)	3438964
2163	13.7	0.3	0.6	chr6	89353269	89353581	(81452398)	C	AluJb	SINE/Alu	(0)	312	1	3444615
1920	15.6	1.1	0.0	chr6	92059310	92059591	(78746388)	+	AluSx4	SINE/Alu	21	305	(5)	3448457
4294	17.5	1.2	16.7	chr6	92059592	92060084	(78745895)	+	THE1B-int	LTR/ERVL-MaLR	537	1031	(600)	3448454
25438	6.2	0.1	0.0	chr6	92951873	92958015	(77847964)	+	L1PA4	LINE/L1	2	6152	(3)	3449509
20661	7.5	0.3	0.2	chr6	92995183	93000000	(77805979)	+	L1P1	LINE/L1	11	4832	(1314)	3449552
21931	7.9	1.8	0.3	chr6	96494375	96500000	(74305979)	C	L1PA6	LINE/L1	(5)	6149	445	3453797
3088	12.8	0.0	0.0	chr6	96500001	96500444	(74305535)	C	L1P2	LINE/L1	(5740)	444	1	3453798
19750	6.2	0.6	0.2	chr6	96637756	96642258	(74163721)	+	L1PA4	LINE/L1	1998	6601	(1540)	3453951
25573	5.8	0.1	0.1	chr6	97794644	97800532	(73005447)	+	L1PA4	LINE/L1	9	5900	(255)	3455502
12944	5.1	0.2	0.0	chr6	97904114	97906508	(72899471)	C	L1PA5	LINE/L1	(4)	6150	3751	3455634
748	7.2	5.9	1.8	chr6	97906508	97906620	(72899359)	+	L1P2	LINE/L1	531	648	(5536)	3455635
7493	5.2	0.2	0.1	chr6	97906616	97907589	(72898390)	+	L1P2	LINE/L1	1319	2277	(3869)	3455635
326	30.4	4.2	5.8	chr6	99457696	99457866	(71348113)	C	MER5A	DNA/hAT-Charlie	(1)	188	21	3457641
187	25.0	5.1	1.8	chr6	99457965	99458021	(71347958)	+	MIR	SINE/MIR	204	262	(0)	3457642
2232	10.2	0.3	0.0	chr6	99458035	99458318	(71347661)	C	AluSc8	SINE/Alu	(26)	285	1	3457643
9056	12.0	2.0	12.4	chr6	99637204	99638561	(71167418)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1339	3	3457973
24995	6.8	0.3	0.2	chr6	99670804	99676939	(71129040)	C	L1PA5	LINE/L1	(3)	6324	185	3458011
17725	12.2	3.0	0.5	chr6	99702130	99708121	(71097858)	+	L1PA6	LINE/L1	5	6154	(0)	3458043
15	7.2	3.2	3.1	chr6	100461301	100461331	(70344648)	+	(AAAAAC)n	Simple_repeat	1	32	(0)	3459033
23568	7.9	1.2	0.8	chr6	100968727	100971115	(69834864)	+	L1PA6	LINE/L1	182	2560	(3759)	3459710
16466	7.7	1.2	0.0	chr6	101028532	101031465	(69774514)	C	L1P1	LINE/L1	(3176)	2970	1	3459784
7269	19.4	12.9	1.5	chr6	103139371	103140920	(67665059)	C	MER52A	LTR/ERV1	(2)	1753	1	3462379
7406	13.7	12.9	2.6	chr6	103396514	103397877	(67408102)	+	THE1C-int	LTR/ERVL-MaLR	48	1580	(0)	3462695
23661	6.7	1.7	0.7	chr6	104799761	104805872	(66000107)	+	L1PA6	LINE/L1	5	6154	(0)	3464459
23429	7.2	1.1	0.2	chr6	105338424	105344208	(65461771)	+	L1PA5	LINE/L1	177	6002	(325)	3465281
1861	15.0	0.3	0.0	chr6	105409683	105409968	(65396011)	C	MSTA-int	LTR/ERVL-MaLR	(680)	971	685	3465384
15973	12.6	3.4	1.5	chr6	105409970	105412809	(65393170)	+	L1M1	LINE/L1	1271	4170	(3395)	3465386
24960	7.0	0.4	0.0	chr6	105415012	105421154	(65384825)	+	L1PA5	LINE/L1	174	6327	(0)	3465388
10843	11.8	3.1	0.2	chr6	105686276	105687856	(65118123)	+	THE1C-int	LTR/ERVL-MaLR	3	1631	(0)	3465761
22086	6.4	0.5	0.3	chr6	107166664	107170611	(63635368)	C	L1PA5	LINE/L1	(2180)	3966	1	3468352
204	34.1	7.6	1.2	chr6	107305054	107305139	(63500840)	C	MIR3	SINE/MIR	(92)	116	25	3468644
10242	11.2	4.6	1.1	chr6	108007659	108008724	(62797255)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	497	3469771
2390	10.4	0.0	0.0	chr6	108008725	108009031	(62796948)	C	AluY	SINE/Alu	(2)	309	3	3469776
25235	6.3	0.8	0.2	chr6	108410816	108416935	(62389044)	+	L1PA5	LINE/L1	9	6153	(1)	3470594
8656	8.7	0.1	0.0	chr6	108513131	108514253	(62291726)	+	L1PA4	LINE/L1	4	1127	(5028)	3470769
11619	9.3	0.6	2.7	chr6	109190860	109192472	(61613507)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3471804
2192	7.2	6.1	0.0	chr6	109316212	109316487	(61489492)	C	AluSg4	SINE/Alu	(15)	295	2	3471979
24199	6.6	0.2	0.1	chr6	109534605	109540728	(61265251)	C	L1PA5	LINE/L1	(3)	6151	24	3472326
25489	5.8	0.2	0.1	chr6	109598087	109604210	(61201769)	C	L1PA5	LINE/L1	(13)	6141	11	3472396
181	24.6	0.0	3.4	chr6	109691574	109691632	(61114347)	+	OldhAT1	DNA/hAT-Ac	1898	1954	(894)	3472534
3757	12.0	4.2	1.3	chr6	110137435	110137907	(60668072)	+	LTR24C	LTR/ERV1	1	496	(139)	3473209
7600	17.9	13.2	1.9	chr6	110137908	110139459	(60666520)	C	MER52A	LTR/ERV1	(0)	1755	1	3473210
24688	5.4	0.1	0.1	chr6	110259004	110265127	(60540852)	+	L1PA4	LINE/L1	24	6148	(7)	3473390
8159	10.4	0.1	2.5	chr6	111189891	111191013	(59614966)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	485	3475189
17	18.7	3.3	4.8	chr6	111483720	111483779	(59322200)	+	(GCGG)n	Simple_repeat	1	62	(0)	3475666
18621	5.1	1.0	0.3	chr6	111505513	111507862	(59298117)	C	L1P2	LINE/L1	(3794)	2352	1	3475722
11363	10.6	0.3	0.1	chr6	112608461	112610036	(58195943)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3477329
25939	5.2	0.1	0.1	chr6	114799880	114806049	(55999930)	C	L1PA4	LINE/L1	(0)	6155	9	3480613
11591	10.6	1.3	0.2	chr6	115197821	115199431	(55606548)	C	THE1D-int	LTR/ERVL-MaLR	(2)	1629	1	3481042
9564	13.7	2.9	4.1	chr6	115271800	115273392	(55532587)	+	THE1C-int	LTR/ERVL-MaLR	2	1574	(6)	3481107
9526	13.4	3.5	3.4	chr6	115735151	115736727	(55069252)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(0)	3481657
18	24.6	0.0	0.0	chr6	116100826	116100873	(54705106)	+	(GCCCC)n	Simple_repeat	1	48	(0)	3482130
24002	6.6	1.3	0.6	chr6	116342692	116348145	(54457834)	+	L1PA5	LINE/L1	4	5484	(670)	3482444
23566	7.9	0.8	0.6	chr6	116500870	116507021	(54298958)	+	L1PA6	LINE/L1	5	6151	(3)	3482647
25258	7.1	0.3	0.2	chr6	117095269	117101409	(53704570)	C	L1PA5	LINE/L1	(0)	6154	11	3483464
10182	12.1	3.2	1.0	chr6	117970919	117972462	(52833517)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3484551
21	22.8	1.4	4.1	chr6	118935172	118935243	(51870736)	+	G-rich	Low_complexity	1	73	(0)	3485880
1513	25.6	7.2	1.9	chr6	118935315	118935928	(51870051)	C	L1M4	LINE/L1	(1034)	5112	4464	3485881
12467	11.1	1.4	0.0	chr6	119082302	119083909	(51722070)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	2	3486089
12017	12.4	5.7	2.5	chr6	119236728	119237363	(51568616)	+	Tigger1	DNA/TcMar-Tigger	1446	2071	(347)	3486334
12	28.0	0.0	0.0	chr6	119348985	119349023	(51456956)	+	(GCC)n	Simple_repeat	1	39	(0)	3486495
24983	7.4	0.8	0.1	chr6	121267153	121273267	(49532712)	+	L1PA5	LINE/L1	4	6150	(4)	3488726
18	7.0	0.0	3.1	chr6	121334481	121334521	(49471458)	+	(CGCGCA)n	Simple_repeat	1	39	(0)	3488811
1144	28.8	9.8	2.4	chr6	121339355	121339908	(49466071)	C	L1MC5a	LINE/L1	(11)	2766	2167	3488818
578	24.9	8.3	1.2	chr6	121339913	121340079	(49465900)	+	MER45R	DNA/hAT-Tip100	5	184	(1397)	3488819
2901	22.7	6.6	2.5	chr6	121340083	121340853	(49465126)	+	MER45B	DNA/hAT-Tip100	236	1040	(0)	3488820
23761	7.6	0.8	0.4	chr6	121702939	121709090	(49096889)	+	L1PA6	LINE/L1	174	6327	(0)	3489463
433	26.1	2.9	2.9	chr6	122788978	122789115	(48016864)	+	PrimLTR79	LTR/ERV1	364	501	(2)	3490849
25471	5.2	0.2	0.8	chr6	122939357	122945550	(47860429)	C	L1PA4	LINE/L1	(0)	6155	1	3491087
3995	10.3	14.4	2.5	chr6	123137802	123138244	(47667735)	+	THE1C-int	LTR/ERVL-MaLR	228	773	(858)	3491321
1061	15.1	0.0	1.1	chr6	123138236	123138409	(47667570)	+	THE1C	LTR/ERVL-MaLR	210	381	(0)	3491321
10005	12.0	4.4	0.0	chr6	124300471	124301980	(46503999)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3492835
283	29.4	1.1	5.2	chr6	125364059	125364155	(45441824)	+	MIR1_Amn	SINE/MIR	44	136	(94)	3494219
24129	7.3	0.8	0.8	chr6	125395925	125402244	(45403735)	+	L1PA5	LINE/L1	326	6469	(0)	3494263
25604	6.3	0.4	0.0	chr6	126726286	126732395	(44073584)	+	L1PA5	LINE/L1	11	6145	(9)	3495964
23372	7.1	1.5	0.2	chr6	127255063	127261128	(43544851)	+	L1PA6	LINE/L1	1	6140	(14)	3496641
7908	11.6	0.4	0.1	chr6	127363457	127364612	(43441367)	+	THE1D-int	LTR/ERVL-MaLR	472	1631	(0)	3496786
21	6.8	0.0	0.0	chr6	127516372	127516402	(43289577)	+	(CTG)n	Simple_repeat	1	31	(0)	3497000
25755	5.9	0.5	0.3	chr6	127926201	127932339	(42873640)	+	L1PA5	LINE/L1	1	6147	(7)	3497514
23128	7.1	1.2	2.0	chr6	128774139	128780383	(42025596)	C	L1PA6	LINE/L1	(3)	6151	1	3498630
22099	6.1	0.1	0.2	chr6	128829463	128835615	(41970364)	+	L1PA5	LINE/L1	2	6145	(9)	3498695
23776	6.7	0.8	0.3	chr6	131086337	131092461	(39713518)	+	L1PA5	LINE/L1	4	6149	(5)	3501811
26205	4.8	0.1	0.3	chr6	131234907	131241067	(39564912)	C	L1PA4	LINE/L1	(1)	6154	3	3502054
2680	10.4	3.1	0.7	chr6	131433340	131433745	(39372234)	+	MSTA	LTR/ERVL-MaLR	13	428	(0)	3502335
2802	23.7	7.2	4.7	chr6	131433751	131434585	(39371394)	+	L1PA17	LINE/L1	348	1205	(6010)	3502336
14	17.6	2.5	2.4	chr6	131950864	131950903	(38855076)	+	(GCCGCA)n	Simple_repeat	1	41	(0)	3503156
13	16.8	0.0	5.4	chr6	131950933	131950969	(38855010)	+	(GCCCG)n	Simple_repeat	1	37	(0)	3503157
13	18.1	0.0	4.9	chr6	131951186	131951226	(38854753)	+	(GGCGAGC)n	Simple_repeat	1	41	(0)	3503158
18	8.7	0.0	0.0	chr6	131951577	131951601	(38854378)	+	(A)n	Simple_repeat	1	25	(0)	3503159
11662	10.4	0.8	0.1	chr6	132174209	132175826	(38630153)	C	MSTA-int	LTR/ERVL-MaLR	(1)	1630	1	3503509
634	19.1	11.4	2.7	chr6	132338062	132338244	(38467735)	C	MIR	SINE/MIR	(59)	203	3	3503702
228	33.3	2.1	5.4	chr6	132338274	132338422	(38467557)	+	LTR16A1	LTR/ERVL	8	151	(344)	3503703
441	32.5	8.0	4.8	chr6	134036303	134036638	(36769341)	+	L2c	LINE/L2	3040	3387	(0)	3506053
13	11.6	2.2	8.7	chr6	134174939	134174983	(36630996)	+	(GCCTC)n	Simple_repeat	1	46	(0)	3506324
10768	12.6	1.4	0.9	chr6	135478141	135479763	(35326216)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	3508510
19	0.0	0.0	0.0	chr6	137278315	137278335	(33527644)	+	(A)n	Simple_repeat	1	21	(0)	3511240
11973	9.0	0.2	1.1	chr6	138073891	138074649	(32731330)	+	THE1B-int	LTR/ERVL-MaLR	1	749	(831)	3512429
2319	11.4	0.3	0.0	chr6	138074650	138074955	(32731024)	+	AluSx	SINE/Alu	1	307	(5)	3512430
24984	6.6	0.6	0.0	chr6	138705938	138712050	(32093929)	C	L1PA6	LINE/L1	(15)	6139	9	3513386
733	18.6	6.1	0.0	chr6	138712066	138712189	(32093790)	C	FLAM_C	SINE/Alu	(10)	133	2	3513387
248	14.6	0.0	0.0	chr6	139981966	139982006	(30823973)	+	LTR91	LTR/ERVL	88	128	(71)	3515502
2164	11.3	1.0	1.0	chr6	140746838	140747137	(30058842)	+	AluSg7	SINE/Alu	1	300	(9)	3516441
9492	13.6	1.8	6.3	chr6	140747138	140748200	(30057779)	+	THE1B-int	LTR/ERVL-MaLR	495	1579	(1)	3516439
16524	7.8	1.2	1.5	chr6	142979400	142983546	(27822433)	C	L1P2	LINE/L1	(2026)	4120	4	3519241
2230	12.5	0.0	0.7	chr6	143213489	143213816	(27592163)	C	AluSx1	SINE/Alu	(0)	312	1	3519542
23198	6.6	0.9	0.5	chr6	144041198	144047335	(26758644)	C	L1PA6	LINE/L1	(15)	6312	174	3520754
10039	11.2	6.0	0.3	chr6	145707791	145709280	(25096699)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3523096
18	18.9	4.2	0.0	chr6	145814784	145814831	(24991148)	+	(CCCGC)n	Simple_repeat	1	50	(0)	3523214
12	21.6	0.0	0.0	chr6	146543341	146543372	(24262607)	+	(GGCCCC)n	Simple_repeat	1	32	(0)	3524168
15	20.7	0.0	7.0	chr6	146543641	146543697	(24262282)	+	(CCGGC)n	Simple_repeat	1	57	(0)	3524169
9719	11.9	7.4	0.3	chr6	147400342	147401853	(23404126)	C	THE1D-int	LTR/ERVL-MaLR	(2)	1629	3	3525346
11104	10.0	0.7	1.6	chr6	149908003	149909595	(20896384)	+	THE1B-int	LTR/ERVL-MaLR	2	1580	(0)	3529385
22992	7.1	0.8	0.2	chr6	152608999	152615129	(18190850)	+	L1PA6	LINE/L1	5	6152	(2)	3533766
16845	6.9	1.2	0.1	chr6	152882745	152886192	(17919787)	+	L1P2	LINE/L1	70	3539	(2607)	3534153
11805	9.1	0.9	0.2	chr6	155236921	155238466	(15567513)	C	THE1B-int	LTR/ERVL-MaLR	(6)	1574	18	3537853
10295	10.0	3.0	0.5	chr6	156490010	156491533	(14314446)	+	THE1C-int	LTR/ERVL-MaLR	17	1580	(0)	3539524
26506	5.1	0.2	0.0	chr6	156604705	156610838	(14195141)	+	L1PA4	LINE/L1	7	6152	(3)	3539710
11114	11.6	1.4	1.2	chr6	156613296	156614922	(14191057)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	3539713
18351	7.0	0.4	0.5	chr6	156663510	156666817	(14139162)	+	L1P2	LINE/L1	175	3475	(2844)	3539786
13	4.7	0.0	4.2	chr6	157275099	157275122	(13530857)	+	(GGGA)n	Simple_repeat	1	24	(0)	3540654
12	27.6	3.9	0.0	chr6	157275184	157275235	(13530744)	+	(GAGGCGG)n	Simple_repeat	1	54	(0)	3540655
769	26.2	11.9	11.1	chr6	157275258	157275528	(13530451)	C	MLT1C	LTR/ERVL-MaLR	(38)	429	125	3540656
10626	9.8	4.6	1.2	chr6	157589748	157591273	(13214706)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	3541146
15	15.5	0.0	9.6	chr6	158818193	158818244	(11987735)	+	(CGCC)n	Simple_repeat	1	52	(0)	3543164
17	7.3	0.0	3.2	chr6	158818324	158818354	(11987625)	+	(GGGCC)n	Simple_repeat	1	31	(0)	3543165
364	34.4	0.0	3.1	chr6	159594283	159594444	(11211535)	+	MIRb	SINE/MIR	95	251	(17)	3544284
2112	12.6	1.0	0.7	chr6	159627002	159627310	(11178669)	C	AluSx1	SINE/Alu	(1)	311	2	3544339
246	18.0	0.0	0.0	chr6	159627324	159627373	(11178606)	C	L2a	LINE/L2	(251)	3175	3126	3544340
26002	6.2	0.2	0.2	chr6	159670615	159676755	(11129224)	+	L1PA5	LINE/L1	11	6152	(2)	3544421
1058	10.4	0.0	0.0	chr6	159704004	159704138	(11101841)	+	AluSc	SINE/Alu	1	135	(174)	3544472
26204	6.0	0.3	0.1	chr6	159704141	159710266	(11095713)	+	L1PA5	LINE/L1	2	6140	(14)	3544473
22906	7.3	0.5	0.1	chr6	160208729	160214880	(10591099)	C	L1PA6	LINE/L1	(0)	6154	1	3545193
526	33.0	5.9	0.5	chr6	163108972	163109178	(7696801)	C	MamRTE1	LINE/RTE-BovB	(655)	3157	2939	3549037
12574	9.6	0.1	0.4	chr6	164204578	164206161	(6599818)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3550472
10147	14.4	1.4	0.6	chr6	164580874	164582489	(6223490)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	3	3550936
11578	9.9	1.3	0.0	chr6	165235866	165237424	(5568555)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3551712
8416	17.4	9.4	2.7	chr6	166101355	166102890	(4703089)	C	MSTB-int	LTR/ERVL-MaLR	(0)	1651	1	3552794
256	34.9	3.9	2.7	chr6	166976240	166976425	(3829554)	+	MIRc	SINE/MIR	34	221	(47)	3553853
388	35.6	4.6	3.7	chr6	168614431	168615747	(2190232)	+	TAR1	Satellite/telo	1	1328	(552)	3555632
10578	12.4	5.7	0.3	chr6	170004121	170005661	(800318)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	3	3557057
10361	12.0	2.9	3.8	chr6	170300469	170302063	(503916)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	3557304
833	10.5	0.0	0.0	chr7	813173	813277	(158532696)	+	AluSq2	SINE/Alu	207	311	(2)	3558948
2506	7.4	0.7	0.0	chr7	2424924	2425233	(156920740)	+	AluSx1	SINE/Alu	1	312	(0)	3561386
643	31.4	15.7	2.7	chr7	3412903	3413413	(155932560)	C	L2a	LINE/L2	(17)	3409	2821	3563254
1963	15.4	2.7	0.0	chr7	3413414	3413705	(155932268)	+	AluSx1	SINE/Alu	2	301	(11)	3563255
15	23.5	0.0	6.5	chr7	5555179	5555240	(153790733)	+	(CCCGC)n	Simple_repeat	1	62	(0)	3567325
13	23.4	1.6	6.3	chr7	5555381	5555442	(153790531)	+	(CCCCGA)n	Simple_repeat	1	63	(0)	3567326
13	9.4	8.3	2.6	chr7	6059100	6059135	(153286838)	+	(GCCCA)n	Simple_repeat	1	39	(0)	3568487
1005	32.9	10.0	5.2	chr7	6997480	6997710	(152348263)	+	L2b	LINE/L2	2233	2465	(954)	3570508
392	30.8	12.4	2.8	chr7	8401274	8401527	(150944446)	C	L2c	LINE/L2	(0)	3387	3106	3572453
11093	11.0	0.7	0.1	chr7	10054404	10055973	(149290000)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3574473
24131	7.5	0.6	0.2	chr7	10747088	10753227	(148592746)	+	L1PA5	LINE/L1	4	6154	(0)	3575277
11601	10.3	0.0	0.1	chr7	12535533	12537113	(146808860)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3577473
14	15.4	5.6	0.0	chr7	12686828	12686863	(146659110)	+	(GGCG)n	Simple_repeat	1	38	(0)	3577694
18739	7.2	0.3	0.2	chr7	12935642	12940227	(146405746)	C	L1P2	LINE/L1	(1565)	4581	4	3578072
495	33.5	6.8	8.9	chr7	13421204	13421606	(145924367)	C	L2a	LINE/L2	(39)	3387	2994	3578739
11858	23.7	5.1	2.8	chr7	13421609	13426749	(145919224)	+	L1M4	LINE/L1	639	5608	(1234)	3578740
12891	6.4	1.1	0.1	chr7	13676653	13678303	(145667670)	C	L1P1	LINE/L1	(4486)	1669	1	3579032
11947	8.7	0.6	0.2	chr7	16947647	16949220	(142396753)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3583239
9451	8.1	1.6	0.0	chr7	17052953	17054201	(142291772)	+	L1P1	LINE/L1	11	1279	(4876)	3583381
11594	8.8	1.5	0.8	chr7	17393836	17395404	(141950569)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3583837
23292	7.0	1.1	0.2	chr7	17734718	17740820	(141605153)	+	L1PA5	LINE/L1	4	6150	(4)	3584313
23918	7.1	0.8	0.3	chr7	18169458	18175596	(141170377)	C	L1PA6	LINE/L1	(0)	6154	1	3584930
9804	11.2	3.7	0.1	chr7	19478705	19480142	(139865831)	C	L1P2	LINE/L1	(4686)	1498	8	3586572
25184	6.8	0.5	0.1	chr7	19900579	19906684	(139439289)	C	L1PA4	LINE/L1	(25)	6130	1	3587038
10196	12.1	6.0	0.3	chr7	20208215	20209751	(139136222)	+	THE1D-int	LTR/ERVL-MaLR	3	1631	(0)	3587445
20	17.8	1.8	3.6	chr7	21427972	21428028	(137917945)	+	(CGCCC)n	Simple_repeat	1	56	(0)	3589265
16	22.8	6.6	0.0	chr7	21428284	21428344	(137917629)	+	(CTCC)n	Simple_repeat	1	65	(0)	3589266
10859	9.9	1.3	4.3	chr7	23832913	23834543	(135511430)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3593032
23268	7.0	0.6	0.2	chr7	24272981	24279128	(135066845)	C	L1PA6	LINE/L1	(0)	6154	1	3593618
408	32.2	4.6	2.0	chr7	24963629	24963777	(134382196)	+	MIR3	SINE/MIR	2	154	(54)	3594663
325	18.6	2.8	1.4	chr7	24963786	24963856	(134382117)	+	MER112	DNA/hAT-Charlie	2	73	(188)	3594664
18853	6.1	0.1	0.1	chr7	25000001	25002413	(134343560)	C	L1P2	LINE/L1	(3750)	2396	1	3594725
11715	8.5	2.2	0.6	chr7	25110041	25110881	(134235092)	+	THE1B-int	LTR/ERVL-MaLR	1	852	(728)	3594939
12	20.4	8.6	1.6	chr7	25180092	25180149	(134165824)	+	(GGCAGG)n	Simple_repeat	1	63	(0)	3595065
21	23.8	1.1	6.6	chr7	25180367	25180462	(134165511)	+	(GCCCC)n	Simple_repeat	1	90	(0)	3595066
26530	6.0	0.2	0.2	chr7	27002446	27008595	(132337378)	C	L1PA5	LINE/L1	(0)	6154	2	3597855
20254	6.9	1.0	0.3	chr7	27981997	27986629	(131359344)	+	L1P2	LINE/L1	4	4656	(1490)	3599325
382	21.8	5.2	5.2	chr7	28126092	28126207	(131219766)	C	MamRep1879	DNA/hAT-Tip100?	(1)	215	100	3599524
2131	9.7	1.1	0.0	chr7	28186641	28186899	(131159074)	C	AluSc8	SINE/Alu	(13)	298	37	3599631
20	27.1	0.0	0.0	chr7	28854656	28854705	(130491268)	+	(AC)n	Simple_repeat	1	50	(0)	3600671
784	24.3	2.8	1.9	chr7	28854754	28854967	(130491006)	+	MLT2C1	LTR/ERVL	1	216	(181)	3600672
7220	11.4	2.4	2.0	chr7	29528240	29529868	(129816105)	+	L1PA6	LINE/L1	174	2031	(4326)	3601759
15	13.7	7.5	0.0	chr7	30134912	30134951	(129211022)	+	(GGAGGC)n	Simple_repeat	1	43	(0)	3602682
14	20.1	2.0	4.0	chr7	30134949	30134997	(129210976)	+	(GCCCGCC)n	Simple_repeat	1	50	(0)	3602683
13	31.6	1.6	1.5	chr7	30135014	30135077	(129210896)	+	(CCGGC)n	Simple_repeat	1	65	(0)	3602684
386	21.1	12.0	0.0	chr7	30505427	30505534	(128840439)	+	MIR	SINE/MIR	34	154	(108)	3603221
1454	23.3	9.2	8.7	chr7	30505671	30506305	(128839668)	+	L1MC5a	LINE/L1	1393	1994	(783)	3603222
12	22.2	0.0	6.4	chr7	32728907	32728953	(126617020)	+	(GGC)n	Simple_repeat	1	47	(0)	3606677
10717	11.7	3.4	1.6	chr7	32801805	32803405	(126542568)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	3606797
2045	14.6	1.4	1.4	chr7	32875277	32875571	(126470402)	C	AluJo	SINE/Alu	(17)	295	1	3606900
1660	19.2	6.6	1.1	chr7	32875682	32876054	(126469919)	+	L1MB8	LINE/L1	5783	6177	(1)	3606901
15	23.3	0.0	0.0	chr7	32957415	32957454	(126388519)	+	(GCGG)n	Simple_repeat	1	40	(0)	3607084
14	22.9	0.0	6.9	chr7	32957516	32957573	(126388400)	+	(GCCGC)n	Simple_repeat	1	58	(0)	3607085
23955	7.1	1.2	0.4	chr7	34431328	34437453	(124908520)	+	L1PA6	LINE/L1	174	6325	(2)	3609283
11026	9.7	2.3	2.9	chr7	36321240	36322424	(123023549)	+	THE1B-int	LTR/ERVL-MaLR	407	1579	(1)	3612104
1149	14.8	0.0	0.0	chr7	36389365	36389526	(122956447)	C	AluJb	SINE/Alu	(14)	298	137	3612221
8647	11.3	1.8	3.4	chr7	37555129	37556110	(121789863)	C	MSTA-int	LTR/ERVL-MaLR	(370)	1261	263	3613946
10220	10.4	4.7	3.9	chr7	37775464	37777029	(121568944)	+	THE1C-int	LTR/ERVL-MaLR	2	1580	(0)	3614253
1155	21.8	16.2	7.2	chr7	39607197	39607652	(119738321)	+	MLT1D	LTR/ERVL-MaLR	1	505	(0)	3616802
6462	15.8	1.6	4.0	chr7	39714374	39715122	(119630851)	+	MSTA-int	LTR/ERVL-MaLR	456	1211	(440)	3616998
25570	6.5	0.3	0.0	chr7	40333761	40339892	(119006081)	C	L1PA5	LINE/L1	(4)	6150	3	3618283
23514	6.9	0.8	0.1	chr7	40928947	40935059	(118410914)	C	L1PA6	LINE/L1	(13)	6141	1	3619164
8337	8.8	0.4	0.3	chr7	41552204	41553284	(117792689)	C	L1PA6	LINE/L1	(5102)	1082	1	3620013
22383	8.0	0.7	0.1	chr7	42365445	42371576	(116974397)	C	L1PA6	LINE/L1	(2)	6152	5	3621149
237	20.6	6.4	5.2	chr7	42888108	42888184	(116457789)	+	MER54B	LTR/ERVL	367	444	(349)	3621806
13	21.1	7.9	3.7	chr7	43758839	43758878	(115587095)	+	(GGCCCG)n	Simple_repeat	1	81	(0)	3623128
17	12.4	2.9	0.0	chr7	43758879	43758913	(115587060)	+	(GCCCC)n	Simple_repeat	1	36	(0)	3623129
26	24.6	9.0	2.2	chr7	44258189	44258377	(115087596)	+	(CACATG)n	Simple_repeat	1	201	(0)	3623996
12	21.9	3.9	3.8	chr7	44796964	44797014	(114548959)	+	(GCG)n	Simple_repeat	1	53	(0)	3624883
261	29.8	5.0	1.1	chr7	45112115	45112209	(114233764)	C	Charlie8	DNA/hAT-Charlie	(2303)	125	27	3625496
232	25.0	2.7	0.0	chr7	45112211	45112282	(114233691)	C	HAL1	LINE/L1	(402)	2105	2032	3625497
2079	9.8	3.9	0.7	chr7	45112285	45112580	(114233393)	+	AluSz6	SINE/Alu	7	312	(0)	3625498
24408	6.3	0.2	0.0	chr7	45315283	45321419	(114024554)	+	L1PA5	LINE/L1	1	6147	(7)	3625807
35	0.0	0.0	0.0	chr7	45987379	45987416	(113358557)	+	(A)n	Simple_repeat	1	38	(0)	3626678
9898	12.4	3.2	3.6	chr7	49078269	49079855	(110266118)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3630678
4936	20.4	4.3	3.1	chr7	50069351	50070586	(109275387)	C	HERV15-int	LTR/ERV1	(7653)	1148	1	3631929
5739	10.9	1.1	1.0	chr7	54933085	54933175	(104412798)	+	L1MA3	LINE/L1	7464	7557	(167)	3637987
12	27.4	1.8	3.5	chr7	54933238	54933293	(104412680)	+	G-rich	Low_complexity	1	57	(0)	3637989
12	12.8	5.6	2.6	chr7	54933402	54933437	(104412536)	+	(GAGGCG)n	Simple_repeat	1	38	(0)	3637990
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
2300	5.4	2.5	0.0	chr7	64306939	64307216	(95038757)	C	AluSc8	SINE/Alu	(17)	294	10	3646129
35	0.0	0.0	0.0	chr7	64307217	64307249	(95038724)	+	(CGCCCTGC)n	Simple_repeat	1	33	(0)	3646130
14	20.4	1.7	6.8	chr7	64307702	64307759	(95038214)	+	(CCCT)n	Simple_repeat	1	59	(0)	3646131
24790	5.4	0.8	0.2	chr7	65414793	65420880	(93925093)	+	L1PA4	LINE/L1	7	6137	(18)	3647808
359	24.2	14.3	0.6	chr7	66413115	66413315	(92932658)	C	FLAM_C	SINE/Alu	(2)	300	45	3649935
2329	5.7	0.3	2.7	chr7	66844045	66844343	(92501630)	C	AluSg7	SINE/Alu	(17)	292	1	3650960
26424	5.1	0.7	0.1	chr7	72142016	72148104	(87197869)	+	L1PA5	LINE/L1	30	6154	(0)	3661700
19	9.2	2.9	0.0	chr7	73521779	73521813	(85824160)	+	(CCCGG)n	Simple_repeat	1	36	(0)	3664803
16	22.6	3.3	3.2	chr7	73521924	73521983	(85823990)	+	(GCG)n	Simple_repeat	1	62	(0)	3664804
14	21.7	0.0	8.1	chr7	73557165	73557226	(85788747)	+	G-rich	Low_complexity	1	62	(0)	3664903
12	20.2	0.0	6.7	chr7	73738869	73738913	(85607060)	+	(CCGCC)n	Simple_repeat	1	45	(0)	3665345
17	23.3	2.0	0.0	chr7	73828071	73828120	(85517853)	+	G-rich	Low_complexity	1	51	(0)	3665577
270	31.7	7.7	0.0	chr7	73828247	73828366	(85517607)	+	MIRc	SINE/MIR	94	223	(45)	3665578
588	30.5	3.1	0.0	chr7	74079073	74079262	(85266711)	C	L2	LINE/L2	(867)	2552	2357	3666133
2364	9.8	0.3	0.0	chr7	74079564	74079869	(85266104)	+	AluSx1	SINE/Alu	1	307	(5)	3666135
2260	9.6	0.0	0.0	chr7	75743054	75743335	(83602638)	C	AluSx1	SINE/Alu	(30)	282	1	3670405
63	6.2	1.1	2.2	chr7	75743339	75743427	(83602546)	+	(TC)n	Simple_repeat	1	90	(0)	3670406
419	23.2	6.1	4.2	chr7	75743433	75743576	(83602397)	C	LTR33	LTR/ERVL	(350)	165	19	3670402
2911	11.0	6.2	0.2	chr7	77082240	77082713	(82263260)	+	Tigger3b	DNA/TcMar-Tigger	728	1231	(0)	3673260
25468	6.3	0.3	0.4	chr7	77142464	77148558	(82197415)	C	L1PA5	LINE/L1	(51)	6103	1	3673349
21678	7.3	0.2	0.1	chr7	79941092	79947236	(79398737)	C	L1PA5	LINE/L1	(4)	6150	1	3677444
9412	16.7	1.1	1.1	chr7	80065899	80067549	(79278424)	C	MSTB-int	LTR/ERVL-MaLR	(0)	1651	1	3677614
22815	7.8	1.7	0.4	chr7	81824079	81830172	(77515801)	C	L1PA6	LINE/L1	(0)	6154	1	3680054
7666	19.4	10.3	2.7	chr7	81919514	81921131	(77424842)	C	MER52A	LTR/ERV1	(0)	1755	1	3680182
17416	6.8	0.4	0.0	chr7	82649855	82652079	(76693894)	+	L1PA4	LINE/L1	1	2233	(3922)	3681202
24661	7.1	0.8	0.2	chr7	83711427	83717524	(75628449)	C	L1PA5	LINE/L1	(6)	6148	13	3682626
16493	8.6	0.9	0.7	chr7	85677522	85679966	(73666007)	C	L1PA6	LINE/L1	(3711)	2435	5	3685091
7063	11.8	4.4	0.0	chr7	85808308	85809352	(73536621)	+	THE1B-int	LTR/ERVL-MaLR	1	1093	(487)	3685219
25124	5.8	1.1	0.0	chr7	86375398	86380999	(72964974)	+	L1P1	LINE/L1	1	5659	(496)	3685875
10515	12.1	0.7	1.4	chr7	86391131	86392711	(72953262)	C	THE1B-int	LTR/ERVL-MaLR	(1)	1579	11	3685886
338	37.9	2.1	4.9	chr7	86768884	86769127	(72576846)	C	MamTip2	DNA/hAT-Tip100	(22)	283	47	3686349
23652	7.2	0.3	0.5	chr7	86981686	86985673	(72360300)	+	L1PA6	LINE/L1	174	4137	(2182)	3686634
10430	9.3	3.5	5.8	chr7	87204309	87205924	(72140049)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	2	3686916
23719	7.2	0.6	0.2	chr7	90359155	90365278	(68980695)	C	L1PA6	LINE/L1	(5)	6149	2	3690972
203	22.2	15.9	3.2	chr7	92179326	92179418	(67166555)	C	MER5B	DNA/hAT-Charlie	(13)	165	59	3693494
24350	7.1	1.0	0.1	chr7	92379775	92385890	(66960083)	+	L1PA6	LINE/L1	1	6151	(3)	3693810
748	15.0	17.7	0.7	chr7	92447150	92447303	(66898670)	+	MER53	DNA/hAT	3	188	(5)	3693907
225	0.0	0.0	0.0	chr7	92447312	92447336	(66898637)	+	Charlie1b	DNA/hAT-Charlie	495	519	(4)	3693908
23702	7.7	0.8	0.1	chr7	92919235	92925360	(66420613)	C	L1PA7	LINE/L1	(2)	6152	4	3694579
25889	6.9	0.4	0.1	chr7	93071126	93073950	(66272023)	C	L1PA4	LINE/L1	(3313)	2833	7	3694800
24042	6.5	0.3	0.1	chr7	95379228	95385358	(63960615)	+	L1PA5	LINE/L1	11	6147	(7)	3697859
9343	10.1	10.9	4.0	chr7	95460187	95461697	(63884276)	+	THE1C-int	LTR/ERVL-MaLR	3	1631	(0)	3698003
26240	5.8	0.3	0.3	chr7	96288294	96294442	(63051531)	+	L1PA5	LINE/L1	11	6154	(0)	3699129
23862	7.1	1.0	0.1	chr7	97210062	97216165	(62129808)	C	L1PA6	LINE/L1	(4)	6150	5	3700435
24840	5.9	0.5	0.1	chr7	97785608	97791738	(61554235)	+	L1PA5	LINE/L1	1	6153	(1)	3701284
18023	6.1	0.7	0.0	chr7	99799760	99803753	(59542220)	C	L1P1	LINE/L1	(2124)	4022	1	3705318
261	28.7	10.3	1.4	chr7	100088687	100088829	(59257144)	C	MIRb	SINE/MIR	(87)	181	26	3705845
11	29.1	3.3	1.6	chr7	100088850	100088909	(59257064)	+	(GCCGCCA)n	Simple_repeat	1	62	(0)	3705846
20	25.0	1.6	1.6	chr7	100088957	100089019	(59256954)	+	(GGC)n	Simple_repeat	1	64	(0)	3705847
799	14.4	0.0	0.0	chr7	100837125	100837242	(58508731)	C	AluJo	SINE/Alu	(194)	118	1	3707490
25703	6.3	0.1	0.8	chr7	102722556	102728733	(56617240)	+	L1PA5	LINE/L1	1	6136	(18)	3711654
23902	6.9	0.2	0.4	chr7	103016328	103022487	(56323486)	+	L1PA5	LINE/L1	1	6149	(5)	3712084
14	27.2	3.5	0.0	chr7	103074995	103075051	(56270922)	+	(CGCCC)n	Simple_repeat	1	59	(0)	3712168
13256	7.3	1.3	0.4	chr7	103452134	103453977	(55891996)	C	L1PA7	LINE/L1	(4294)	1861	1	3712773
24304	5.9	0.8	0.0	chr7	104729753	104735841	(54610132)	C	L1PA5	LINE/L1	(7)	6147	11	3714527
22	11.3	0.0	0.0	chr7	105521796	105521833	(53824140)	+	(CGGGGAG)n	Simple_repeat	1	38	(0)	3716040
18	16.4	0.0	2.7	chr7	105521971	105522021	(53823952)	+	G-rich	Low_complexity	1	49	(0)	3716041
12307	8.3	0.3	0.0	chr7	106006283	106007857	(53338116)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3716949
31	0.0	0.0	0.0	chr7	106101439	106101467	(53244506)	+	(C)n	Simple_repeat	1	29	(0)	3717099
12606	9.1	3.4	0.5	chr7	106320179	106321936	(53024037)	+	L1PA3	LINE/L1	5	1815	(4369)	3717430
22320	7.2	1.5	0.8	chr7	106671762	106675311	(52670662)	+	L1PA6	LINE/L1	4	3567	(2579)	3717913
23527	7.1	0.1	0.2	chr7	106709408	106715579	(52630394)	+	L1PA6	LINE/L1	177	6327	(0)	3717954
243	26.6	16.1	1.1	chr7	108226822	108226916	(51119057)	C	L2b	LINE/L2	(26)	3349	3238	3720246
478	26.3	8.6	6.7	chr7	108226949	108227212	(51118761)	+	L2a	LINE/L2	3158	3387	(0)	3720247
24294	6.2	0.4	0.6	chr7	108387570	108393732	(50952241)	C	L1PA5	LINE/L1	(5)	6149	1	3720463
9243	14.3	3.3	5.2	chr7	109237368	109238978	(50106995)	+	THE1C-int	LTR/ERVL-MaLR	2	1580	(0)	3721568
25226	5.9	0.7	0.1	chr7	110472220	110478325	(48867648)	+	L1PA4	LINE/L1	1	6137	(18)	3723072
1088	20.7	1.0	5.7	chr7	111850182	111850499	(47495474)	+	MER31A	LTR/ERV1	148	450	(35)	3724932
2245	14.4	7.3	0.7	chr7	111850497	111850929	(47495044)	+	LTR7C	LTR/ERV1	8	471	(0)	3724933
9872	13.5	4.3	0.8	chr7	113272437	113274009	(46071964)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	3726927
4915	8.1	0.2	0.0	chr7	113363975	113364619	(45981354)	C	L1P1	LINE/L1	(4983)	1172	527	3727027
9402	12.7	5.4	0.1	chr7	113645013	113646460	(45699513)	C	THE1B-int	LTR/ERVL-MaLR	(6)	1574	46	3727368
11254	9.6	2.2	0.0	chr7	113670109	113671653	(45674320)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3727400
1652	24.1	3.9	3.5	chr7	114302633	114303149	(45042824)	+	MLT1E1A	LTR/ERVL-MaLR	58	680	(0)	3728236
10338	11.4	3.2	0.1	chr7	114486466	114487995	(44857978)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3728462
638	15.6	0.0	0.0	chr7	116944325	116944414	(42401559)	C	5S	rRNA	(31)	90	1	3731833
10181	13.4	2.2	2.5	chr7	118308453	118310061	(41035912)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	28	3733729
14784	16.6	3.8	5.9	chr7	119267630	119271826	(40074147)	C	L1PA16	LINE/L1	(2738)	4111	5	3734952
15104	9.0	0.1	0.1	chr7	120649712	120651752	(38694221)	C	L1P1	LINE/L1	(4101)	2054	13	3736655
8634	10.8	0.3	0.1	chr7	120894788	120895974	(38449999)	+	THE1B-int	LTR/ERVL-MaLR	1	1190	(390)	3736967
24214	6.6	1.2	0.3	chr7	120900748	120906862	(38439111)	+	L1PA6	LINE/L1	1	6154	(0)	3736977
10176	10.9	3.2	3.5	chr7	121284356	121285940	(38060033)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	3737479
302	23.7	8.7	12.0	chr7	121395853	121396068	(37949905)	+	L1M4b	LINE/L1	472	679	(6188)	3737604
16	30.9	1.4	1.4	chr7	121396138	121396206	(37949767)	+	(CCGC)n	Simple_repeat	1	70	(0)	3737605
2107	11.0	0.6	0.0	chr7	121438422	121438749	(37907224)	C	L1P1	LINE/L1	(5468)	687	358	3737681
9705	5.0	0.8	0.0	chr7	121438750	121440798	(37905175)	+	L1PA5	LINE/L1	4089	6150	(4)	3737682
16931	7.6	0.2	0.1	chr7	121722330	121725484	(37620489)	C	L1PA16	LINE/L1	(2987)	3159	1	3738102
24429	6.4	0.3	0.1	chr7	122834317	122840443	(36505530)	+	L1PA5	LINE/L1	11	6154	(0)	3739620
10910	11.3	0.8	0.9	chr7	123049131	123050213	(36295760)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	496	3739919
25283	6.3	0.4	0.1	chr7	123079344	123085436	(36260537)	C	L1PA5	LINE/L1	(1)	6153	41	3739949
2622	19.7	3.2	6.4	chr7	124263146	124263726	(35082247)	C	LTR69	LTR/ERVL	(1)	587	26	3741623
14	15.9	0.0	0.0	chr7	124765942	124765969	(34580004)	+	(CCT)n	Simple_repeat	1	28	(0)	3742264
23777	7.5	0.9	0.2	chr7	124900534	124906652	(34439321)	+	L1PA5	LINE/L1	5	6154	(0)	3742473
26	3.4	0.0	0.0	chr7	125529829	125529858	(33816115)	+	(TTTTG)n	Simple_repeat	1	30	(0)	3743240
9538	14.2	3.9	0.2	chr7	126275105	126276625	(33069348)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1580	2	3744220
25614	6.0	0.4	0.1	chr7	126613402	126619522	(32726451)	+	L1PA5	LINE/L1	11	6150	(4)	3744652
18	23.0	8.5	3.1	chr7	127392851	127392968	(31953005)	+	(GCCGAGG)n	Simple_repeat	1	128	(0)	3745668
23700	7.0	0.8	0.3	chr7	127450974	127457096	(31888877)	+	L1PA6	LINE/L1	182	6321	(6)	3745757
9713	11.6	4.8	1.8	chr7	127545609	127547139	(31798834)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1580	1	3745888
35	11.5	0.0	5.4	chr7	129502235	129502308	(29843665)	+	(CGCCCC)n	Simple_repeat	1	74	(0)	3749263
16	17.1	0.0	4.7	chr7	129825841	129825883	(29520090)	+	(CCGCC)n	Simple_repeat	1	43	(0)	3749925
12	22.1	2.7	0.0	chr7	129825959	129825995	(29519978)	+	(CCCCA)n	Simple_repeat	1	38	(0)	3749926
26497	5.3	0.4	0.2	chr7	131978363	131984483	(27361490)	C	L1PA4	LINE/L1	(18)	6137	2	3753768
274	31.1	13.0	1.2	chr7	132253941	132254103	(27091870)	+	MIR3	SINE/MIR	14	198	(10)	3754126
24459	7.7	1.1	0.1	chr7	133321275	133327357	(26018616)	C	L1PA3	LINE/L1	(0)	6155	2	3755792
3498	8.6	7.9	0.4	chr7	134432178	134432666	(24913307)	C	MER1A	DNA/hAT-Charlie	(0)	529	1	3757479
613	25.4	2.6	5.6	chr7	134432667	134432705	(24913268)	+	MIRb	SINE/MIR	182	216	(52)	3757478
1629	27.4	6.1	3.9	chr7	134547175	134547687	(24798286)	+	HERVI-int	LTR/ERV1	450	974	(6763)	3757671
3134	25.3	0.3	0.5	chr7	134547812	134548478	(24797495)	+	HERVI-int	LTR/ERV1	3833	4498	(3239)	3757671
25752	4.8	0.5	0.8	chr7	135066748	135072925	(24273048)	+	L1PA4	LINE/L1	1	6154	(1)	3758435
2234	22.4	2.3	1.4	chr7	135095090	135095601	(24250372)	+	L1MCb	LINE/L1	462	978	(5067)	3758460
1927	21.9	4.3	1.5	chr7	135661509	135661981	(23683992)	+	LTR31	LTR/ERV1	115	601	(18)	3759373
14	17.6	2.5	2.4	chr7	135662425	135662464	(23683509)	+	G-rich	Low_complexity	1	41	(0)	3759374
11259	10.2	1.8	0.1	chr7	137831667	137833220	(21512753)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3762462
11319	9.3	0.6	0.1	chr7	138219939	138221396	(21124577)	+	THE1B-int	LTR/ERVL-MaLR	115	1580	(0)	3763147
3710	10.6	1.6	14.0	chr7	138527776	138528547	(20817426)	C	LTR76	LTR/ERV1	(0)	675	1	3763805
25566	6.4	0.3	0.8	chr7	138531293	138537368	(20808605)	C	L1PA5	LINE/L1	(75)	6252	174	3763810
49084	15.0	2.7	1.4	chr7	138557290	138565603	(20780370)	C	HERV3-int	LTR/ERV1	(0)	8426	1	3763836
2212	16.1	13.3	5.1	chr7	138565605	138566149	(20779824)	C	LTR4	LTR/ERV1	(0)	596	1	3763836
32	0.0	0.0	0.0	chr7	138981540	138981569	(20364404)	+	(GCCT)n	Simple_repeat	1	30	(0)	3764672
24969	6.5	1.4	0.1	chr7	140103316	140109396	(19236577)	C	L1PA5	LINE/L1	(2)	6152	5	3766713
13	21.9	3.9	3.7	chr7	140697490	140697542	(18648431)	+	GA-rich	Low_complexity	1	53	(0)	3768042
14	10.5	4.2	8.0	chr7	141702159	141702206	(17643767)	+	(GGCG)n	Simple_repeat	1	50	(0)	3769699
15	22.0	3.6	3.5	chr7	141702222	141702277	(17643696)	+	(GCC)n	Simple_repeat	1	58	(0)	3769700
26643	4.6	0.5	0.0	chr7	141769962	141776086	(17569887)	C	L1PA4	LINE/L1	(3)	6152	4	3769800
7615	12.6	4.7	0.2	chr7	144008845	144009974	(15335999)	+	THE1D-int	LTR/ERVL-MaLR	1	1183	(448)	3772615
8827	10.6	3.9	1.9	chr7	144614184	144615519	(14730454)	+	L1PA5	LINE/L1	4	1367	(4817)	3773441
11518	9.7	1.0	0.0	chr7	145275664	145277227	(14068746)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3774415
24140	7.6	1.0	0.2	chr7	145966591	145972707	(13373266)	+	L1PA6	LINE/L1	3	6154	(0)	3775292
25203	6.0	0.6	0.1	chr7	147732041	147738166	(11607807)	C	L1PA5	LINE/L1	(3)	6151	1	3777691
22834	7.5	0.4	0.5	chr7	147862934	147869109	(11476864)	C	L1PA6	LINE/L1	(4)	6150	1	3777851
26	2.6	4.9	2.3	chr7	149091051	149091091	(10254882)	+	(CAGGGA)n	Simple_repeat	1	43	(0)	3780003
12	21.6	5.6	5.3	chr7	149262051	149262121	(10083852)	+	(GCCGCGG)n	Simple_repeat	1	75	(0)	3780412
14	10.1	6.2	0.0	chr7	149262245	149262276	(10083697)	+	(CCGCTG)n	Simple_repeat	1	34	(0)	3780413
2292	8.8	0.0	1.3	chr7	149262922	149263226	(10082747)	C	AluSg	SINE/Alu	(9)	301	1	3780414
2398	20.3	17.0	0.2	chr7	149537149	149537937	(9808036)	+	L1MEc	LINE/L1	69	992	(5408)	3780826
26084	6.7	0.5	0.1	chr7	149573820	149579948	(9766025)	C	L1PA5	LINE/L1	(5)	6149	1	3780873
24838	6.5	0.3	0.1	chr7	150807556	150813715	(8532258)	+	L1PA6	LINE/L1	3	6153	(1)	3782494
2482	6.8	0.0	1.3	chr7	151969799	151970109	(7375864)	C	AluY	SINE/Alu	(4)	307	1	3784342
2426	20.3	3.9	7.0	chr7	151970110	151970332	(7375641)	C	LTR71B	LTR/ERV1	(412)	198	2	3784341
1105	24.0	6.1	11.7	chr7	151970333	151970383	(7375590)	C	L1M3	LINE/L1	(1215)	4931	4877	3784340
2008	17.8	6.6	0.2	chr7	151970384	151970782	(7375191)	+	MSTB	LTR/ERVL-MaLR	1	426	(0)	3784343
24095	6.5	0.7	0.1	chr7	152060478	152066587	(7279386)	C	L1PA5	LINE/L1	(4)	6323	174	3784502
11471	10.2	1.6	1.3	chr7	152470969	152471815	(6874158)	+	THE1A-int	LTR/ERVL-MaLR	444	1274	(306)	3785198
8092	13.8	8.9	0.9	chr7	154725658	154727108	(4618865)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1580	3	3788665
9262	13.2	3.5	4.2	chr7	154933831	154935462	(4410511)	C	THE1C-int	LTR/ERVL-MaLR	(8)	1623	3	3788931
345	29.5	8.0	2.7	chr7	155205477	155205664	(4140309)	C	MIR	SINE/MIR	(36)	226	28	3789348
11411	9.9	0.9	0.2	chr7	156860499	156862068	(2483905)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3791452
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
2348	13.0	4.7	0.7	chr7	158595570	158595980	(749993)	C	MSTA	LTR/ERVL-MaLR	(0)	428	1	3793409
12	17.6	4.5	4.3	chr7	158705144	158705187	(640786)	+	GA-rich	Low_complexity	1	46	(0)	3793569
12141	9.1	0.9	0.3	chr7	158983295	158984862	(361111)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	2	3793981
18	30.2	2.1	3.1	chr8	1823735	1823828	(143314808)	+	G-rich	Low_complexity	1	96	(0)	3796153
257	32.6	2.3	4.4	chr8	6728474	6728608	(138410028)	C	Charlie16a	DNA/hAT-Charlie	(72)	270	139	3802511
13	15.5	5.6	0.0	chr8	8227960	8227995	(136910641)	+	(CCCGGAC)n	Simple_repeat	1	38	(0)	3804363
13	10.5	6.5	0.0	chr8	17497022	17497052	(127641584)	+	(CCGCC)n	Simple_repeat	1	33	(0)	3818285
25387	6.8	1.2	0.1	chr8	20742704	20748777	(124389859)	+	L1PA6	LINE/L1	11	6149	(5)	3823352
252	28.3	6.5	0.0	chr8	27674369	27674502	(117464134)	+	MIR3	SINE/MIR	62	204	(4)	3834780
10909	12.6	2.5	0.2	chr8	33651244	33652836	(111485800)	+	THE1C-int	LTR/ERVL-MaLR	3	1631	(0)	3844993
10095	11.1	4.8	4.3	chr8	36180712	36182164	(108956472)	C	THE1B-int	LTR/ERVL-MaLR	(109)	1471	1	3848525
5288	21.4	7.7	0.4	chr8	36296914	36298104	(108840532)	+	THE1C-int	LTR/ERVL-MaLR	2	1295	(356)	3848692
236	32.5	12.8	3.1	chr8	38565648	38565809	(106572827)	C	MamTip2	DNA/hAT-Tip100	(81)	224	45	3852540
354	31.7	3.2	1.6	chr8	38665766	38665887	(106472749)	C	MER5A	DNA/hAT-Charlie	(1)	188	65	3852727
181	29.6	0.0	0.0	chr8	38666080	38666123	(106472513)	+	L2a	LINE/L2	3356	3399	(27)	3852728
10615	7.4	0.4	0.1	chr8	39031445	39032803	(106105833)	C	L1P2	LINE/L1	(4816)	1368	5	3853408
24772	6.5	1.0	0.1	chr8	41225009	41231111	(103907525)	+	L1PA6	LINE/L1	5	6149	(5)	3856662
605	25.5	3.0	2.4	chr8	41787926	41788090	(103350546)	C	MER117	DNA/hAT-Charlie	(29)	168	3	3857587
2524	12.9	4.9	2.1	chr8	42149312	42149701	(102988935)	+	MSTB	LTR/ERVL-MaLR	1	385	(41)	3858232
716	14.6	0.0	0.0	chr8	42149702	42149804	(102988832)	+	MER30	DNA/hAT-Charlie	1	103	(127)	3858233
25764	6.4	1.0	0.1	chr8	43183649	43189742	(101948894)	C	L1PA5	LINE/L1	(13)	6141	5	3860257
1113	17.5	1.4	0.4	chr8	46534255	46544722	(98593914)	+	ALR/Alpha	Satellite/centr	1	10568	(0)	3860862
9951	11.2	0.2	0.0	chr8	46940724	46942173	(98196463)	+	L1P1	LINE/L1	11	1463	(4692)	3861286
22570	7.4	0.8	0.3	chr8	47343969	47350103	(97788533)	C	L1PA5	LINE/L1	(0)	6154	5	3861808
24215	6.1	0.5	0.1	chr8	47416625	47422756	(97715880)	C	L1PA4	LINE/L1	(0)	6155	2	3861915
24047	6.8	0.5	0.2	chr8	47484872	47491006	(97647630)	+	L1PA5	LINE/L1	11	6153	(1)	3861993
24472	5.6	0.7	0.1	chr8	47500001	47505742	(97632894)	C	L1P1	LINE/L1	(359)	5796	20	3862008
23390	7.2	1.1	0.1	chr8	47548770	47554878	(97583758)	C	L1PA5	LINE/L1	(0)	6154	4	3862057
23057	7.7	1.8	0.6	chr8	48485588	48491678	(96646958)	+	L1PA6	LINE/L1	5	6153	(1)	3863371
12194	8.1	0.2	1.1	chr8	48945094	48946796	(96191840)	C	L1P2	LINE/L1	(4496)	1688	1	3863862
23954	6.8	0.5	0.1	chr8	48953911	48960023	(96178613)	C	L1PA5	LINE/L1	(6)	6148	11	3863873
245	35.4	6.9	5.5	chr8	50054201	50054457	(95084179)	+	L2c	LINE/L2	2466	2726	(693)	3865183
24987	7.0	0.6	0.8	chr8	50148416	50154511	(94984125)	C	L1PA5	LINE/L1	(6)	6321	241	3865308
25287	6.4	0.2	0.0	chr8	50507918	50514060	(94624576)	C	L1PA4	LINE/L1	(0)	6155	4	3865726
25785	5.3	0.3	0.1	chr8	51492298	51498465	(93640171)	+	L1PA4	LINE/L1	2	6155	(0)	3866864
24468	6.0	0.1	0.0	chr8	52506485	52512618	(92626018)	+	L1PA5	LINE/L1	11	6147	(7)	3868236
25875	5.6	0.3	0.1	chr8	53369011	53375153	(91763483)	+	L1PA4	LINE/L1	1	6155	(0)	3869406
24371	5.8	0.2	0.0	chr8	53695163	53700952	(91437684)	C	L1PA3	LINE/L1	(1)	6154	353	3869812
1121	11.4	3.7	0.0	chr8	53700950	53701133	(91437503)	C	L1PA3	LINE/L1	(5963)	192	2	3869812
26581	5.2	0.3	0.0	chr8	54580986	54587123	(90551513)	C	L1PA4	LINE/L1	(0)	6155	2	3871316
26584	5.5	0.1	0.1	chr8	54602021	54608161	(90530475)	C	L1PA4	LINE/L1	(3)	6152	14	3871335
23655	6.7	0.3	0.2	chr8	55615746	55621609	(89517027)	+	L1PA4	LINE/L1	5	5856	(299)	3872619
22707	7.3	0.6	0.4	chr8	55656151	55662303	(89476333)	+	L1PA6	LINE/L1	182	6325	(2)	3872672
38	0.0	4.8	0.0	chr8	56128232	56128273	(89010363)	+	(ATCT)n	Simple_repeat	1	44	(0)	3873590
1454	22.1	5.4	6.5	chr8	56128274	56128639	(89009997)	C	MLT2D	LTR/ERVL	(46)	368	1	3873589
23570	6.5	1.0	0.4	chr8	56146153	56152289	(88986347)	C	L1PA5	LINE/L1	(1)	6153	4	3873613
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
828	29.3	5.5	3.9	chr8	57210498	57210965	(87927671)	C	MER50	LTR/ERV1	(231)	503	28	3874994
1522	26.8	10.1	3.4	chr8	57559906	57560689	(87577947)	+	LTR102_Mam	LTR/ERVL	3	844	(7)	3875489
40	0.0	0.0	0.0	chr8	58553556	58553592	(86585044)	+	(GGGCTG)n	Simple_repeat	1	37	(0)	3876759
909	7.0	7.9	0.0	chr8	60582735	60582862	(84555774)	C	MER85	DNA/PiggyBac	(0)	139	1	3879430
1777	16.1	3.5	3.2	chr8	60582863	60582947	(84555689)	C	AluJo	SINE/Alu	(232)	80	1	3879429
195	33.3	0.0	0.0	chr8	60582962	60583018	(84555618)	C	L2b	LINE/L2	(5)	3370	3314	3879431
12	22.1	4.8	0.0	chr8	60583035	60583076	(84555560)	+	G-rich	Low_complexity	1	44	(0)	3879432
10055	10.3	2.6	0.1	chr8	61481245	61482722	(83655914)	+	L1PA5	LINE/L1	4	1519	(4665)	3880698
30	18.9	0.0	6.2	chr8	61734957	61735037	(83403599)	+	(TA)n	Simple_repeat	1	81	(0)	3881032
9877	13.8	3.6	0.9	chr8	62906874	62908459	(82230177)	+	THE1B-int	LTR/ERVL-MaLR	3	1631	(0)	3882453
22573	7.0	0.8	0.3	chr8	63077187	63080439	(82058197)	+	L1PA6	LINE/L1	1	3257	(2889)	3882679
7288	16.7	6.6	14.5	chr8	65903686	65905489	(79233147)	+	THE1D-int	LTR/ERVL-MaLR	1	1651	(0)	3886583
10186	13.4	2.2	3.8	chr8	65934790	65936445	(79202191)	+	THE1C-int	LTR/ERVL-MaLR	3	1631	(0)	3886625
24636	6.8	1.9	0.4	chr8	65992852	65998921	(79139715)	C	L1PA5	LINE/L1	(0)	6154	4	3886713
24963	6.5	0.5	0.1	chr8	67352934	67359075	(77779561)	C	L1PA6	LINE/L1	(1)	6153	7	3889115
17070	6.4	0.3	0.0	chr8	68276304	68280679	(76857957)	+	L1P1	LINE/L1	2	4390	(1756)	3890483
11040	12.5	1.2	1.1	chr8	69514523	69516152	(75622484)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	3892141
25865	6.7	0.4	0.0	chr8	69843301	69849423	(75289213)	+	L1PA5	LINE/L1	2	6147	(7)	3892680
1276	14.2	4.2	9.3	chr8	69994522	69994688	(75143948)	C	MER45R	DNA/hAT-Tip100	(889)	692	521	3893025
700	24.4	3.9	4.3	chr8	69994842	69995026	(75143610)	C	MER45R	DNA/hAT-Tip100	(1308)	273	89	3893025
26141	5.4	0.2	0.1	chr8	70808323	70814458	(74324178)	+	L1PA4	LINE/L1	13	6155	(0)	3894381
8009	11.7	1.2	0.9	chr8	70820905	70822054	(74316582)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1580	427	3894392
26	0.0	0.0	0.0	chr8	71362156	71362180	(73776456)	+	(T)n	Simple_repeat	1	25	(0)	3895128
24905	7.0	0.8	0.1	chr8	71393304	71399409	(73739227)	C	L1PA5	LINE/L1	(8)	6146	4	3895157
25060	7.0	0.4	0.2	chr8	71581619	71587762	(73550874)	+	L1PA5	LINE/L1	2	6154	(0)	3895402
16280	8.8	0.1	0.0	chr8	71936556	71939973	(73198663)	C	L1PA3	LINE/L1	(2706)	3440	22	3895849
401	19.6	12.8	2.0	chr8	71939971	71940116	(73198520)	C	L1MCc	LINE/L1	(4589)	2448	2263	3895846
24287	6.7	0.7	1.6	chr8	72291054	72297285	(72841351)	+	L1PA5	LINE/L1	4	6154	(0)	3896278
23358	6.6	2.7	0.3	chr8	72321141	72327130	(72811506)	+	L1PA5	LINE/L1	1	6153	(1)	3896301
11183	10.9	3.7	0.8	chr8	72990356	72991890	(72146746)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	3897206
11156	7.8	1.7	1.1	chr8	73055510	73056094	(72082542)	+	L1PA6	LINE/L1	1	571	(5613)	3897358
2000	8.6	1.2	0.0	chr8	73056095	73056349	(72082287)	C	AluY	SINE/Alu	(10)	301	44	3897359
23106	6.7	0.6	1.6	chr8	73234867	73241084	(71897552)	C	L1PA6	LINE/L1	(8)	6146	8	3897675
24850	8.4	2.5	1.0	chr8	73568857	73574918	(71563718)	+	L1PA6	LINE/L1	4	6153	(1)	3898158
1127	19.7	0.5	1.0	chr8	77041632	77041829	(68096807)	C	AluSz	SINE/Alu	(115)	197	1	3902989
25365	7.0	0.2	0.3	chr8	77041857	77045031	(68093605)	+	L1PA5	LINE/L1	2	3183	(2963)	3902990
1439	23.1	7.9	1.6	chr8	77384304	77384751	(67753885)	+	L1MDa	LINE/L1	1561	2039	(4594)	3903444
182	35.5	4.5	1.8	chr8	77384899	77385007	(67753629)	C	L2a	LINE/L2	(40)	3386	3275	3903450
10417	14.2	0.6	1.0	chr8	77569066	77570703	(67567933)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	3903678
21991	6.2	3.5	0.0	chr8	80003521	80009422	(65129214)	+	L1PA5	LINE/L1	11	6138	(16)	3906860
10604	9.1	5.7	0.5	chr8	80149475	80150971	(64987665)	+	THE1B-int	LTR/ERVL-MaLR	2	1580	(0)	3907108
742	16.0	3.0	2.3	chr8	80280539	80280669	(64857967)	C	FLAM_C	SINE/Alu	(11)	132	1	3907418
27131	4.5	0.2	0.4	chr8	80649192	80655347	(64483289)	+	L1PA4	LINE/L1	14	6155	(0)	3908182
11765	9.8	0.3	0.1	chr8	80945241	80946817	(64191819)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	3908620
24141	8.5	0.5	0.4	chr8	83897772	83903924	(61234712)	+	L1PA5	LINE/L1	8	6154	(0)	3912430
10208	11.2	4.2	1.0	chr8	84277445	84278973	(60859663)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3912948
9953	10.6	0.1	0.7	chr8	85742400	85743923	(59394713)	C	L1P1	LINE/L1	(2125)	4021	2507	3914963
246	39.7	2.8	3.9	chr8	86097739	86097995	(59040641)	+	MIRc	SINE/MIR	14	267	(1)	3915497
22	17.2	4.2	4.0	chr8	86098175	86098184	(59040452)	+	(ATTATA)n	Simple_repeat	1	46	(0)	3915498
18	15.9	0.0	0.0	chr8	86098185	86098219	(59040417)	+	(ATA)n	Simple_repeat	1	35	(0)	3915499
1831	13.7	3.6	0.0	chr8	86098222	86098492	(59040144)	C	AluSx	SINE/Alu	(26)	286	6	3915500
11199	11.6	0.2	0.4	chr8	86983386	86984967	(58153669)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3916871
24859	5.3	0.6	0.0	chr8	87385134	87391253	(57747383)	+	L1PA4	LINE/L1	1	6154	(1)	3917310
11304	10.2	1.1	0.1	chr8	87784490	87786053	(57352583)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	3917775
17105	6.9	0.1	0.0	chr8	89162875	89166591	(55972045)	+	L1PA4	LINE/L1	4	3723	(2423)	3919483
15639	6.0	0.5	0.2	chr8	89457545	89461635	(55677001)	+	L1P1	LINE/L1	11	4113	(2033)	3919837
16501	11.7	2.5	0.4	chr8	92308359	92314301	(52824335)	C	L1PA6	LINE/L1	(0)	6154	4	3923714
344	22.5	14.8	2.9	chr8	92343629	92343871	(52794765)	C	L1M5	LINE/L1	(1649)	4497	4221	3923744
262	34.0	0.0	0.0	chr8	92344022	92344115	(52794521)	C	MER5B	DNA/hAT-Charlie	(84)	94	1	3923745
24091	7.1	0.9	0.3	chr8	92557035	92562973	(52575663)	C	L1PA6	LINE/L1	(209)	6118	174	3923991
23984	7.2	0.2	0.2	chr8	93199696	93205863	(51932773)	C	L1PA6	LINE/L1	(6)	6321	175	3924852
23111	7.1	1.1	0.5	chr8	93466326	93471713	(51666923)	+	L1P2	LINE/L1	9	5418	(736)	3925261
11849	8.9	0.6	0.1	chr8	95123037	95124606	(50014030)	+	THE1A-int	LTR/ERVL-MaLR	2	1580	(0)	3928240
23552	7.2	0.9	0.2	chr8	96033132	96039250	(49099386)	C	L1PA5	LINE/L1	(0)	6154	4	3929649
25009	7.0	0.8	0.4	chr8	97523399	97529161	(47609475)	C	L1PA5	LINE/L1	(370)	5784	9	3931849
14	16.9	3.0	0.0	chr8	97644686	97644718	(47493918)	+	(GCT)n	Simple_repeat	1	34	(0)	3932077
24027	7.2	1.2	0.8	chr8	98500371	98506518	(46632118)	C	L1PA8	LINE/L1	(5)	6167	19	3933781
25786	5.4	0.4	0.2	chr8	98710157	98716294	(46422342)	+	L1PA4	LINE/L1	2	6152	(3)	3934057
16518	6.4	0.1	0.6	chr8	99063098	99065200	(46073436)	+	L1PA6	LINE/L1	2	2095	(4089)	3934666
25637	5.5	0.4	0.8	chr8	99081431	99087603	(46051033)	C	L1PA4	LINE/L1	(6)	6149	3	3934685
26286	4.8	0.4	0.1	chr8	99738838	99744983	(45393653)	+	L1PA4	LINE/L1	1	6155	(0)	3935621
26237	5.8	0.3	0.0	chr8	100401821	100407948	(44730688)	+	L1PA5	LINE/L1	11	6152	(2)	3936723
362	21.4	12.7	6.3	chr8	100772033	100772064	(44366572)	C	MIRb	SINE/MIR	(71)	197	167	3937461
2019	15.5	4.4	0.3	chr8	100772065	100772388	(44366248)	C	MER1B	DNA/hAT-Charlie	(0)	339	2	3937462
362	21.4	12.7	6.3	chr8	100772389	100772450	(44366186)	C	MIRb	SINE/MIR	(102)	166	96	3937461
1030	16.6	0.6	0.6	chr8	100772580	100772742	(44365894)	C	AluJb	SINE/Alu	(12)	300	138	3937463
2448	6.5	0.7	0.0	chr8	102676818	102677111	(42461525)	+	AluY	SINE/Alu	1	296	(15)	3940868
281	36.7	7.2	0.0	chr8	102677215	102677342	(42461294)	C	L2a	LINE/L2	(0)	3426	3289	3940869
1010	15.6	0.7	0.7	chr8	102677455	102677608	(42461028)	C	AluJo	SINE/Alu	(22)	290	137	3940870
623	18.1	12.6	4.6	chr8	102961138	102961311	(42177325)	C	MER53	DNA/hAT	(3)	190	1	3941476
527	29.8	4.6	4.2	chr8	102961312	102961378	(42177258)	C	MIR	SINE/MIR	(177)	85	14	3941475
14	12.2	0.0	0.0	chr8	102961505	102961531	(42177105)	+	(CCTCC)n	Simple_repeat	1	27	(0)	3941477
41	0.0	0.0	0.0	chr8	103298774	103298810	(41839826)	+	(CCG)n	Simple_repeat	1	37	(0)	3942079
12	16.8	8.8	3.2	chr8	103299019	103299075	(41839561)	+	G-rich	Low_complexity	1	62	(0)	3942080
24609	6.9	0.7	0.1	chr8	104308597	104314727	(40823909)	+	L1PA6	LINE/L1	7	6154	(0)	3943506
16183	8.4	0.7	0.7	chr8	105955956	105958488	(39180148)	+	L1PA5	LINE/L1	291	2827	(3319)	3945833
25167	6.7	0.5	0.0	chr8	106023329	106029434	(39109202)	+	L1PA5	LINE/L1	11	6149	(5)	3945920
2081	21.7	8.5	4.0	chr8	106522816	106523410	(38615226)	C	MLT1E3	LTR/ERVL-MaLR	(0)	624	1	3946667
426	19.1	5.0	1.1	chr8	106523544	106523638	(38614998)	C	Charlie9	DNA/hAT-Charlie	(2658)	99	1	3946668
2473	7.7	0.0	0.7	chr8	106523778	106524075	(38614561)	C	AluY	SINE/Alu	(15)	296	1	3946669
271	22.3	15.4	9.7	chr8	108299465	108299598	(36839038)	C	L2c	LINE/L2	(2)	3385	3243	3949158
563	17.5	1.9	4.6	chr8	108299616	108299723	(36838913)	+	MIRb	SINE/MIR	164	268	(0)	3949159
433	29.1	10.5	1.4	chr8	108774904	108775119	(36363517)	C	MLT1J1-int	LTR/ERVL-MaLR	(32)	1355	1118	3949871
1542	28.4	13.5	1.1	chr8	108775131	108775747	(36362889)	C	MLT1J1-int	LTR/ERVL-MaLR	(310)	1077	373	3949871
9827	15.7	1.3	0.1	chr8	108820878	108822485	(36316151)	+	MSTA-int	LTR/ERVL-MaLR	1	1627	(4)	3949930
382	24.5	13.0	0.0	chr8	109334695	109334788	(35803848)	C	MIR3	SINE/MIR	(15)	193	86	3950699
11	24.7	4.0	1.9	chr8	109539801	109539850	(35598786)	+	(GCGAGC)n	Simple_repeat	1	52	(0)	3950981
15	20.7	5.1	0.0	chr8	109539836	109539874	(35598762)	+	(GC)n	Simple_repeat	1	41	(0)	3950982
12	16.3	0.0	10.0	chr8	109540007	109540075	(35598561)	+	(TCCGCCC)n	Simple_repeat	1	62	(0)	3950983
6478	17.6	2.5	4.8	chr8	112275875	112277628	(32861008)	C	THE1B-int	LTR/ERVL-MaLR	(9)	1642	1	3954591
1993	14.2	6.2	1.2	chr8	112469476	112469797	(32668839)	C	MER1B	DNA/hAT-Charlie	(0)	339	1	3954855
7327	20.0	3.0	1.1	chr8	114820940	114822364	(30316272)	C	MSTA-int	LTR/ERVL-MaLR	(197)	1454	1	3957851
16	18.9	0.0	0.0	chr8	115451941	115451976	(29686660)	+	(CCCACT)n	Simple_repeat	1	36	(0)	3958725
23441	7.0	0.9	0.1	chr8	116410346	116416460	(28722176)	+	L1PA6	LINE/L1	4	6152	(2)	3959984
10735	9.0	4.7	0.8	chr8	116720531	116722048	(28416588)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	3960474
10074	7.2	0.2	0.1	chr8	117434317	117435695	(27702941)	+	L1PA4	LINE/L1	1	1380	(4775)	3961611
8938	13.7	2.4	0.3	chr8	119277096	119278543	(25860093)	C	THE1D-int	LTR/ERVL-MaLR	(5)	1626	149	3964604
26246	6.4	0.8	0.5	chr8	119521004	119527155	(25611481)	+	L1PA5	LINE/L1	4	6153	(1)	3964946
11	24.2	5.5	1.7	chr8	120125125	120125179	(25013457)	+	(CAGCGG)n	Simple_repeat	1	58	(0)	3966127
18	8.7	0.0	0.0	chr8	120125183	120125207	(25013429)	+	(GA)n	Simple_repeat	1	25	(0)	3966128
18	22.1	0.0	0.0	chr8	124474896	124474937	(20663699)	+	(GCC)n	Simple_repeat	1	42	(0)	3973782
18	23.0	0.0	5.9	chr8	124475020	124475087	(20663549)	+	(CCCGCC)n	Simple_repeat	1	68	(0)	3973783
15	19.9	2.5	0.0	chr8	124475055	124475094	(20663542)	+	(GCCCT)n	Simple_repeat	1	41	(0)	3973784
412	24.7	6.0	11.6	chr8	124755093	124755376	(20383260)	C	MLT1L	LTR/ERVL-MaLR	(0)	610	344	3974268
2490	4.8	1.0	0.0	chr8	124972728	124973017	(20165619)	+	AluY	SINE/Alu	1	293	(18)	3974708
15	19.6	0.0	0.0	chr8	124998387	124998421	(20140215)	+	(GGCAGG)n	Simple_repeat	1	35	(0)	3974745
23884	6.8	0.8	0.4	chr8	125196204	125202353	(19936283)	C	L1PA6	LINE/L1	(1)	6153	1	3975098
14	26.0	1.7	3.3	chr8	125430092	125430171	(19708465)	+	(CCCCTCT)n	Simple_repeat	1	78	(0)	3975579
21	14.6	0.0	0.0	chr8	125430292	125430329	(19708307)	+	(AGG)n	Simple_repeat	1	38	(0)	3975580
23321	6.4	1.1	0.6	chr8	129732687	129738821	(15399815)	+	L1PA6	LINE/L1	1	6154	(0)	3983688
2503	15.9	2.1	8.0	chr8	129822902	129823352	(15315284)	+	MSTB	LTR/ERVL-MaLR	1	424	(2)	3983775
5618	18.1	2.1	0.9	chr8	129823353	129824350	(15314286)	+	MST-int	LTR/ERVL-MaLR	642	1651	(0)	3983776
251	30.1	3.1	5.1	chr8	130606063	130606160	(14532476)	C	MLT1K	LTR/ERVL-MaLR	(187)	408	313	3985425
12074	11.8	1.2	0.0	chr8	130706283	130707893	(14430743)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	1	3985628
2858	15.7	3.9	3.2	chr8	131008620	131009361	(14129275)	+	THE1D-int	LTR/ERVL-MaLR	2	894	(841)	3986173
1657	16.0	6.1	3.0	chr8	131009351	131009653	(14128983)	+	THE1D	LTR/ERVL-MaLR	69	381	(0)	3986173
382	33.6	10.0	2.8	chr8	131056901	131057325	(14081311)	+	L2a	LINE/L2	2943	3384	(3)	3986250
12	18.3	6.7	2.1	chr8	131057514	131057558	(14081078)	+	A-rich	Low_complexity	1	48	(0)	3986251
23251	7.6	0.2	0.7	chr8	131877700	131883893	(13254743)	C	L1PA6	LINE/L1	(1)	6326	174	3987573
19	10.8	0.0	6.5	chr8	131904178	131904223	(13234413)	+	(CCCTTCG)n	Simple_repeat	1	46	(0)	3987615
11450	11.8	0.6	0.0	chr8	132475233	132476853	(12661783)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	3988668
20946	6.9	0.2	0.0	chr8	134667624	134672332	(10466304)	+	L1PA5	LINE/L1	1	4718	(1428)	3992666
360	38.8	3.0	0.0	chr8	134838542	134838701	(10299935)	C	MIRb	SINE/MIR	(12)	256	92	3992958
1773	14.9	2.4	0.3	chr8	134838742	134839029	(10299607)	+	AluJb	SINE/Alu	1	294	(18)	3992959
25765	6.2	0.5	0.1	chr8	138703663	138709792	(6428844)	+	L1PA5	LINE/L1	6	6147	(7)	3999190
15	24.5	2.0	2.0	chr8	139730913	139730962	(5407674)	+	GA-rich	Low_complexity	1	51	(0)	4000810
26163	5.5	0.2	1.5	chr8	140382164	140388390	(4750246)	+	L1PA5	LINE/L1	11	6154	(0)	4001846
456	25.4	2.2	0.0	chr8	141059621	141059754	(4078882)	C	LTR16B2	LTR/ERVL	(213)	249	113	4003098
1350	23.7	11.3	0.7	chr8	141059905	141060316	(4078320)	C	MLT1C	LTR/ERVL-MaLR	(2)	465	5	4003099
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
983	19.0	4.8	0.0	chr8	144233153	144233368	(905268)	C	L1MB3	LINE/L1	(3)	6180	5954	4007362
1068	22.4	3.6	0.7	chr8	144233505	144233801	(904835)	C	L1MB3	LINE/L1	(183)	6000	5695	4007363
13	23.2	0.0	5.9	chr8	144530282	144530332	(608304)	+	G-rich	Low_complexity	1	51	(0)	4007708
13245	9.5	1.0	1.0	chr9	1185910	1187754	(137206963)	C	L1P1	LINE/L1	(4310)	1845	1	4010409
24155	5.4	0.7	0.2	chr9	1931100	1936804	(136457913)	C	L1PA5	LINE/L1	(9)	6145	414	4011448
12	4.5	4.0	3.9	chr9	2621364	2621388	(135773329)	+	(CTG)n	Simple_repeat	1	26	(0)	4012375
12	23.4	4.6	4.4	chr9	2621834	2621898	(135772819)	+	(CTCTCCG)n	Simple_repeat	1	68	(0)	4012376
24920	6.8	0.6	0.1	chr9	3312679	3318534	(135076183)	+	L1PA5	LINE/L1	465	6339	(0)	4013434
1612	20.1	1.1	1.7	chr9	3520690	3520977	(134873740)	C	AluJr	SINE/Alu	(26)	286	1	4013727
15	8.1	0.0	3.6	chr9	4298042	4298069	(134096648)	+	(GCGA)n	Simple_repeat	1	28	(0)	4014804
12	13.7	0.0	0.0	chr9	4662430	4662453	(133732264)	+	(AGC)n	Simple_repeat	1	24	(0)	4015436
25264	5.4	1.0	0.0	chr9	5031772	5037865	(133356852)	+	L1PA4	LINE/L1	1	6151	(4)	4016065
22731	7.7	1.4	0.6	chr9	5100913	5107035	(133287682)	+	L1PA6	LINE/L1	5	6146	(8)	4016132
5585	18.3	1.6	0.9	chr9	5408146	5409153	(132985564)	+	THE1D-int	LTR/ERVL-MaLR	52	1066	(565)	4016422
13	26.4	3.2	3.1	chr9	5628961	5629022	(132765695)	+	(GCGCG)n	Simple_repeat	1	64	(0)	4016814
17	14.2	0.0	0.0	chr9	5629194	5629224	(132765493)	+	(GCC)n	Simple_repeat	1	31	(0)	4016815
24965	7.0	0.9	0.2	chr9	5722563	5728670	(132666047)	C	L1PA5	LINE/L1	(8)	6146	4	4016939
12	18.9	7.1	0.0	chr9	6008236	6008277	(132386440)	+	(CTCCCC)n	Simple_repeat	1	45	(0)	4017398
14	23.6	0.0	4.1	chr9	6008355	6008403	(132386314)	+	G-rich	Low_complexity	1	49	(0)	4017399
13	16.4	2.8	2.7	chr9	6008497	6008532	(132386185)	+	(CCCCG)n	Simple_repeat	1	37	(0)	4017400
24418	6.8	1.1	0.2	chr9	7155360	7161460	(131233257)	C	L1PA6	LINE/L1	(2)	6152	9	4019320
10306	10.7	3.4	4.0	chr9	10263187	10264776	(128129941)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	4023527
25322	6.8	0.4	0.2	chr9	10778294	10784424	(127610293)	+	L1PA5	LINE/L1	184	6320	(7)	4024242
10398	11.0	2.9	2.9	chr9	13834369	13835947	(124558770)	+	THE1B-int	LTR/ERVL-MaLR	1	1579	(1)	4028155
10747	11.3	3.5	0.4	chr9	15322560	15324090	(123070627)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	4030302
16	22.0	0.0	6.7	chr9	15510372	15510431	(122884286)	+	G-rich	Low_complexity	1	60	(0)	4030657
451	31.0	10.9	0.0	chr9	15572364	15572550	(122822167)	+	MIRb	SINE/MIR	7	216	(52)	4030784
24799	5.6	0.5	0.1	chr9	15595150	15601277	(122793440)	C	L1PA4	LINE/L1	(0)	6155	7	4030830
24087	7.0	0.2	0.2	chr9	15644267	15650411	(122744306)	+	L1PA5	LINE/L1	11	6154	(0)	4030889
1872	16.9	0.0	1.0	chr9	16232263	16232563	(122162154)	+	AluJb	SINE/Alu	1	298	(14)	4031645
604	30.2	1.5	1.1	chr9	16232815	16233017	(122161700)	+	MIRb	SINE/MIR	12	226	(42)	4031646
25275	6.9	0.3	0.0	chr9	17210064	17216201	(121178516)	C	L1PA5	LINE/L1	(0)	6154	1	4033063
4561	21.8	7.7	0.9	chr9	18744796	18745870	(119648847)	C	L1MC4	LINE/L1	(431)	7611	6458	4035056
15	5.6	10.3	2.3	chr9	18745974	18746012	(119648705)	+	GA-rich	Low_complexity	1	43	(0)	4035057
191	34.8	1.1	4.2	chr9	18746118	18746213	(119648504)	C	L2	LINE/L2	(560)	2859	2767	4035058
14	15.4	6.7	2.1	chr9	19230372	19230416	(119164301)	+	(CCTC)n	Simple_repeat	1	48	(0)	4035923
26009	6.1	0.8	0.2	chr9	21819141	21825252	(116569465)	C	L1PA5	LINE/L1	(1)	6153	1	4039753
12	21.3	4.4	2.1	chr9	21995109	21995153	(116399564)	+	(CGGCG)n	Simple_repeat	1	47	(0)	4039970
13	24.8	0.0	0.0	chr9	21995348	21995385	(116399332)	+	(TCCCC)n	Simple_repeat	1	38	(0)	4039971
24899	6.3	0.7	0.1	chr9	22177102	22183145	(116211572)	+	L1PA5	LINE/L1	76	6149	(5)	4040252
10906	12.8	0.6	0.3	chr9	22316123	22317749	(116076968)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	4040391
266	33.6	4.7	0.8	chr9	23837306	23837428	(114557289)	+	MIRc	SINE/MIR	5	132	(136)	4042341
746	25.3	13.8	0.0	chr9	23837454	23837647	(114557070)	C	MIR	SINE/MIR	(27)	235	11	4042342
23901	7.5	0.8	0.3	chr9	23991703	23997834	(114396883)	+	L1PA6	LINE/L1	179	6318	(9)	4042523
9886	12.0	5.8	3.0	chr9	24179858	24181394	(114213323)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	4042780
25081	6.7	0.2	0.7	chr9	24662837	24669016	(113725701)	C	L1PA4	LINE/L1	(3)	6152	1	4043368
25025	6.5	0.3	0.2	chr9	25102007	25108083	(113286634)	+	L1PA5	LINE/L1	13	6093	(61)	4043930
25	25.5	4.2	4.0	chr9	25678153	25678272	(112716445)	+	(CGC)n	Simple_repeat	1	125	(0)	4044678
10628	9.3	5.2	1.0	chr9	26881686	26883198	(111511519)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	4046281
16799	7.9	0.1	0.0	chr9	28495644	28498805	(109895912)	C	L1PA5	LINE/L1	(2980)	3166	1	4048662
9650	12.2	2.0	0.1	chr9	30536197	30537596	(107857121)	+	THE1B-int	LTR/ERVL-MaLR	154	1580	(0)	4051304
25326	6.4	0.6	0.1	chr9	31224957	31230636	(107164081)	C	L1P1	LINE/L1	(439)	5715	11	4052122
25254	6.5	0.6	0.0	chr9	31883173	31889274	(106505443)	C	L1PA5	LINE/L1	(11)	6143	11	4052963
1599	29.7	6.3	1.7	chr9	31889286	31889925	(106504792)	C	L1MEg	LINE/L1	(5244)	840	170	4052964
26340	5.1	0.7	0.1	chr9	32684143	32690264	(105704453)	+	L1PA4	LINE/L1	5	6153	(2)	4054048
12246	8.4	0.4	0.0	chr9	32795313	32796886	(105597831)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	4054215
16	28.3	0.0	3.2	chr9	33167352	33167414	(105227303)	+	(GAGGCG)n	Simple_repeat	1	63	(0)	4054861
24864	5.3	0.4	0.4	chr9	34526551	34532701	(103862016)	C	L1PA5	LINE/L1	(0)	6327	186	4057578
8156	15.5	1.1	0.9	chr9	35203611	35204923	(103189794)	+	MSTA-int	LTR/ERVL-MaLR	316	1631	(0)	4058516
381	24.5	7.0	2.8	chr9	35480641	35480749	(102913968)	C	L2c	LINE/L2	(4)	3383	3270	4058918
193	34.8	0.0	0.0	chr9	35480764	35480855	(102913862)	C	MIRc	SINE/MIR	(37)	231	140	4058919
12877	9.1	0.4	2.2	chr9	36698257	36699917	(101694800)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	4061273
9938	10.9	3.9	6.6	chr9	37563321	37564947	(100829770)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(0)	4062940
192	23.1	0.0	0.0	chr9	37914038	37914089	(100480628)	+	MIR3	SINE/MIR	77	128	(80)	4063641
296	22.0	5.7	2.5	chr9	41229379	41230391	(97164326)	+	(TG)n	Simple_repeat	1	1071	(0)	4068370
625	14.0	2.0	0.0	chr9	41234775	41234874	(97159843)	C	Tigger1	DNA/TcMar-Tigger	(1911)	507	406	4068377
8104	6.6	0.4	2.1	chr9	41358049	41359305	(97035412)	+	SST1	Satellite/centr	1	1235	(327)	4068508
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
734	9.3	2.5	2.5	chr9	62802318	62802438	(75592279)	C	5S	rRNA	(0)	121	1	4073675
3051	15.5	2.6	0.5	chr9	62838347	62838981	(75555736)	+	TAR1	Satellite/telo	1420	2068	(43)	4073704
415	28.0	2.0	1.0	chr9	63817237	63817537	(74577180)	+	LSAU	Satellite	1	303	(172)	4074767
235	23.8	4.5	3.8	chr9	63823016	63823908	(74570809)	+	(CA)n	Simple_repeat	1	933	(0)	4074777
2605	29.9	5.1	4.7	chr9	65388281	65390272	(73004445)	+	SST1	Satellite/centr	1	2001	(859)	4076190
11085	11.3	3.9	0.1	chr9	69312532	69314087	(69080630)	C	MSTA-int	LTR/ERVL-MaLR	(13)	1618	1	4081420
18	4.7	0.0	0.0	chr9	69760011	69760032	(68634685)	+	(CG)n	Simple_repeat	1	22	(0)	4082050
16	10.7	3.3	0.0	chr9	69760047	69760076	(68634641)	+	(GCC)n	Simple_repeat	1	31	(0)	4082051
24075	6.9	0.3	0.1	chr9	70234020	70240150	(68154567)	+	L1PA7	LINE/L1	11	6152	(2)	4082801
22358	7.8	0.6	0.4	chr9	70240312	70246471	(68148246)	+	L1PA6	LINE/L1	4	6149	(5)	4082803
11	13.8	2.8	5.4	chr9	70258925	70258960	(68135757)	+	(GCGCGA)n	Simple_repeat	1	37	(0)	4082831
10339	5.5	2.0	0.1	chr9	71998703	71999999	(66394718)	C	L1P2	LINE/L1	(4224)	1960	638	4085645
4644	9.4	1.4	0.3	chr9	72000001	72000629	(66394088)	C	L1P2	LINE/L1	(5548)	636	1	4085646
19269	10.6	3.4	3.2	chr9	72848332	72849698	(65545019)	+	L1PB1	LINE/L1	4822	6185	(682)	4087244
26	0.0	0.0	0.0	chr9	75088217	75088241	(63306476)	+	(GGGGC)n	Simple_repeat	1	25	(0)	4090518
14	18.8	4.3	6.9	chr9	75088334	75088402	(63306315)	+	(CGCTC)n	Simple_repeat	1	72	(0)	4090519
22528	7.7	0.5	0.1	chr9	78054236	78060371	(60334346)	+	L1PA6	LINE/L1	9	6154	(0)	4095184
17554	6.9	0.5	0.5	chr9	78334340	78336184	(60058533)	+	L1PA6	LINE/L1	3	1853	(4331)	4095613
11329	11.2	1.2	1.0	chr9	78916376	78918004	(59476713)	+	THE1D-int	LTR/ERVL-MaLR	1	1631	(0)	4096457
10655	10.5	1.6	0.1	chr9	79107818	79109290	(59285427)	+	THE1A-int	LTR/ERVL-MaLR	1	1496	(84)	4096732
13	26.1	2.4	0.0	chr9	79572466	79572507	(58822210)	+	(GCG)n	Simple_repeat	1	43	(0)	4097447
13	19.5	0.0	2.7	chr9	79572840	79572876	(58821841)	+	G-rich	Low_complexity	1	37	(0)	4097448
9887	11.7	4.2	5.3	chr9	79751335	79752514	(58642203)	C	THE1B-int	LTR/ERVL-MaLR	(1)	1579	371	4097700
5525	7.7	0.3	0.0	chr9	80116594	80117343	(58277374)	C	L1P2	LINE/L1	(5121)	1063	312	4098219
25342	4.0	0.2	0.0	chr9	80117347	80122336	(58272381)	+	L1PA4	LINE/L1	1171	6155	(0)	4098220
7536	3.6	1.3	0.0	chr9	80814985	80816270	(57578447)	C	L1PA4	LINE/L1	(2)	6153	4851	4099048
21707	5.6	0.2	0.1	chr9	80816257	80820715	(57574002)	+	L1PA4	LINE/L1	399	4862	(1284)	4099048
30	18.8	4.3	3.1	chr9	81536460	81536551	(56858166)	+	GA-rich	Low_complexity	1	96	(0)	4100055
2826	8.8	2.3	0.3	chr9	81955190	81955575	(56439142)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1187	4100828
7182	9.8	0.9	0.3	chr9	81955576	81956548	(56438169)	C	THE1B-int	LTR/ERVL-MaLR	(601)	979	1	4100828
11062	9.5	2.5	1.1	chr9	82346028	82347113	(56047604)	+	THE1B-int	LTR/ERVL-MaLR	473	1580	(0)	4101370
9106	16.5	1.4	0.5	chr9	82439916	82441537	(55953180)	+	MSTB-int	LTR/ERVL-MaLR	2	1638	(13)	4101480
10662	13.0	1.6	0.3	chr9	82915533	82917140	(55477577)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1631	3	4102118
529	11.4	1.2	0.0	chr9	83522236	83522314	(54872403)	+	L1MB3	LINE/L1	6065	6144	(39)	4103035
9923	12.4	3.7	4.0	chr9	85474429	85476012	(52918705)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	4106237
14	18.5	0.0	0.0	chr9	85941188	85941218	(52453499)	+	(GGC)n	Simple_repeat	1	31	(0)	4107037
14	15.3	0.0	0.0	chr9	85941551	85941579	(52453138)	+	G-rich	Low_complexity	1	29	(0)	4107038
8891	17.6	4.1	0.5	chr9	86192597	86194188	(52200529)	+	MSTB-int	LTR/ERVL-MaLR	1	1651	(0)	4107467
20	14.3	2.0	3.9	chr9	86354546	86354595	(52040122)	+	(CGCCC)n	Simple_repeat	1	51	(0)	4107753
449	28.8	5.0	0.0	chr9	86559665	86559796	(51834921)	+	Tigger18a	DNA/TcMar-Tigger	14	152	(700)	4108081
432	30.2	2.2	5.3	chr9	86559864	86560052	(51834665)	+	LTR86B2	LTR/ERVL	184	366	(121)	4108082
2098	14.9	0.3	0.7	chr9	87455077	87455385	(50939332)	+	AluSx1	SINE/Alu	1	308	(4)	4109510
10546	13.7	0.9	2.8	chr9	87455386	87456336	(50938381)	C	MSTA-int	LTR/ERVL-MaLR	(710)	921	1	4109509
6821	12.0	1.1	1.4	chr9	87900963	87902057	(50492660)	+	L1PB	LINE/L1	2513	3604	(2542)	4110139
409	18.1	1.4	0.0	chr9	87902063	87902134	(50492583)	+	L1PB	LINE/L1	3918	3990	(2156)	4110139
26391	5.5	0.7	0.1	chr9	87902139	87908249	(50486468)	+	L1PA4	LINE/L1	7	6152	(3)	4110140
408	19.9	5.5	2.4	chr9	88973523	88974748	(49419969)	+	(CA)n	Simple_repeat	1	1293	(0)	4111947
11275	10.3	4.0	0.8	chr9	89275335	89276862	(49117855)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1580	1	4112321
23355	7.2	1.1	1.9	chr9	91471664	91473845	(46920872)	C	L1PA5	LINE/L1	(3979)	2205	3	4115242
13	13.2	6.1	0.0	chr9	93566861	93566893	(44827824)	+	(GAGCCC)n	Simple_repeat	1	35	(0)	4118315
16966	5.9	0.2	0.3	chr9	94048053	94051360	(44343357)	C	L1PA4	LINE/L1	(2843)	3303	1	4118947
9333	14.8	2.9	0.1	chr9	94060901	94062471	(44332246)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	16	4118965
2400	22.4	7.0	4.2	chr9	94216639	94216788	(44177929)	C	L1ME1	LINE/L1	(506)	5688	5542	4119216
26053	6.2	0.8	0.3	chr9	94216744	94222882	(44171835)	+	L1PA5	LINE/L1	4	6154	(0)	4119219
34	28.9	2.2	2.2	chr9	94374646	94374780	(44019937)	+	(CCG)n	Simple_repeat	1	138	(0)	4119493
16	19.0	0.0	7.3	chr9	95426789	95426843	(42967874)	+	(CCCGG)n	Simple_repeat	1	55	(0)	4121215
23	24.9	1.5	0.0	chr9	96655321	96655386	(41739331)	+	G-rich	Low_complexity	1	67	(0)	4123269
628	12.6	0.9	7.6	chr9	96655653	96655771	(41738946)	+	AluJr	SINE/Alu	21	131	(181)	4123270
275	33.7	8.5	1.1	chr9	96853946	96854119	(41540598)	C	MIR	SINE/MIR	(54)	208	21	4123559
14	23.2	4.7	3.0	chr9	96854182	96854245	(41540472)	+	(CCCCGCA)n	Simple_repeat	1	67	(0)	4123560
2310	11.2	0.0	0.3	chr9	97779279	97779582	(40615135)	+	AluSx1	SINE/Alu	1	303	(9)	4125119
6614	11.7	6.4	0.2	chr9	97779583	97780210	(40614507)	+	THE1C-int	LTR/ERVL-MaLR	434	1073	(507)	4125118
50	23.0	3.8	5.9	chr9	97803191	97803463	(40591254)	+	GA-rich	Low_complexity	1	267	(0)	4125170
15	13.7	0.0	2.9	chr9	97803548	97803581	(40591136)	+	(CCGCCC)n	Simple_repeat	1	34	(0)	4125171
269	29.9	5.9	4.6	chr9	97803899	97804115	(40590602)	+	MIRb	SINE/MIR	40	259	(9)	4125172
188	22.1	15.9	2.1	chr9	97819696	97819792	(40574925)	+	L2b	LINE/L2	3263	3375	(0)	4125207
12	10.0	0.0	0.0	chr9	97819793	97819814	(40574903)	+	(GAGT)n	Simple_repeat	1	22	(0)	4125208
26	2.8	5.4	0.0	chr9	97819905	97819941	(40574776)	+	(GTGTGTAT)n	Simple_repeat	1	39	(0)	4125209
25146	6.2	0.4	0.4	chr9	97945362	97951518	(40443199)	C	L1PA6	LINE/L1	(16)	6138	1	4125464
404	35.2	10.6	4.2	chr9	98056160	98056396	(40338321)	C	MIRb	SINE/MIR	(1)	267	14	4125691
16	18.4	7.0	1.6	chr9	98056577	98056633	(40338084)	+	(CCCCG)n	Simple_repeat	1	61	(0)	4125692
14	0.0	0.0	0.0	chr9	98056747	98056764	(40337953)	+	(GGC)n	Simple_repeat	1	18	(0)	4125693
13	8.5	0.0	3.7	chr9	98056971	98056997	(40337720)	+	(CGGGG)n	Simple_repeat	1	27	(0)	4125694
261	31.3	14.6	1.9	chr9	98057100	98057314	(40337403)	+	L2b	LINE/L2	2681	2927	(492)	4125695
24348	6.6	1.2	0.2	chr9	99988562	99994665	(38400052)	+	L1PA6	LINE/L1	5	6152	(2)	4129407
11615	10.2	0.6	0.2	chr9	100656395	100657968	(37736749)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	4130538
16889	8.7	0.8	0.0	chr9	102064230	102067315	(36327402)	C	L1PA6	LINE/L1	(3047)	3272	178	4132571
14154	10.1	1.1	0.1	chr9	102130901	102132877	(36261840)	+	L1PA4	LINE/L1	67	2063	(4092)	4132660
25652	5.8	0.4	0.1	chr9	105563176	105569299	(32825418)	+	L1PA5	LINE/L1	11	6152	(2)	4137716
285	26.6	0.5	4.4	chr9	105588412	105588518	(32806199)	C	L2a	LINE/L2	(3)	3423	3287	4137742
26039	6.5	0.2	0.2	chr9	105785076	105791210	(32603507)	C	L1PA5	LINE/L1	(6)	6148	11	4138045
16817	7.5	0.5	0.1	chr9	106258338	106261497	(32133220)	C	L1PA5	LINE/L1	(2963)	3183	11	4138731
16023	7.6	0.1	0.1	chr9	108497781	108500000	(29894717)	+	L1P1	LINE/L1	2	2219	(3936)	4142819
10370	14.7	0.7	0.4	chr9	108658923	108660547	(29734170)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	4143079
23273	7.6	1.4	0.2	chr9	108713489	108719587	(29675130)	+	L1PA7	LINE/L1	182	6322	(5)	4143183
1937	13.2	2.0	2.3	chr9	108957117	108957419	(29437298)	C	AluJb	SINE/Alu	(10)	302	1	4143552
648	17.1	4.6	21.8	chr9	108957420	108957475	(29437242)	+	MER33	DNA/hAT-Charlie	274	324	(0)	4143551
23237	7.1	1.2	0.4	chr9	109660208	109666322	(28728395)	C	L1PA8	LINE/L1	(11)	6161	5	4144928
20218	9.2	0.3	2.2	chr9	110229430	110235911	(28158806)	C	L1PA4	LINE/L1	(11)	6317	176	4145916
11301	10.0	1.4	0.2	chr9	111265309	111266868	(27127849)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	4147576
223	22.9	0.0	0.0	chr9	111844442	111844489	(26550228)	C	L3b	LINE/CR1	(2)	5230	5183	4148635
12	9.7	0.0	0.0	chr9	112174590	112174611	(26220106)	+	(TGAA)n	Simple_repeat	1	22	(0)	4149309
15	21.9	1.4	8.0	chr9	112174773	112174846	(26219871)	+	(CGCCC)n	Simple_repeat	1	75	(0)	4149310
14	9.6	0.0	0.0	chr9	112175174	112175196	(26219521)	+	(AGC)n	Simple_repeat	1	23	(0)	4149311
31	11.6	4.3	2.8	chr9	112486782	112486850	(25907867)	+	(CCCCG)n	Simple_repeat	1	72	(0)	4149957
955	34.0	4.7	2.7	chr9	113062933	113063595	(25331122)	+	L1MA9	LINE/L1	5622	6298	(14)	4150944
195	29.8	6.6	0.0	chr9	113377424	113377537	(25017180)	+	MIR3	SINE/MIR	31	152	(56)	4151547
2343	10.4	1.0	0.0	chr9	113377605	113377912	(25016805)	C	AluSx	SINE/Alu	(1)	311	1	4151548
10802	13.2	0.7	0.2	chr9	115555721	115557342	(22837375)	C	THE1D-int	LTR/ERVL-MaLR	(1)	1630	1	4155781
9648	15.8	0.3	0.2	chr9	115966769	115968381	(22426336)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	18	4156460
25595	6.9	0.4	0.1	chr9	116509016	116515133	(21879584)	C	L1PA5	LINE/L1	(7)	6147	11	4157540
9796	11.9	3.9	4.7	chr9	118242291	118243883	(20150834)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	4160876
12124	8.6	0.3	0.2	chr9	123721880	123723457	(14671260)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	4171200
29	18.5	2.6	2.5	chr9	123929804	123929880	(14464837)	+	(CCCGG)n	Simple_repeat	1	79	(0)	4171512
14	24.8	1.3	7.7	chr9	123929927	123930003	(14464714)	+	(GCCC)n	Simple_repeat	1	78	(0)	4171513
12	5.5	0.0	0.0	chr9	123930054	123930072	(14464645)	+	(CGC)n	Simple_repeat	1	19	(0)	4171514
24	26.3	0.0	3.7	chr9	123930114	123930207	(14464510)	+	(CGC)n	Simple_repeat	1	90	(0)	4171514
2335	10.7	0.0	0.0	chr9	128192531	128192840	(10201877)	C	AluSz	SINE/Alu	(0)	312	3	4179940
2095	10.9	1.4	1.7	chr9	128193429	128193721	(10200996)	+	AluSx1	SINE/Alu	3	294	(18)	4179941
264	30.7	7.9	6.0	chr9	128419479	128419627	(9975090)	C	MIRb	SINE/MIR	(22)	246	95	4180475
15	10.4	0.0	5.7	chr9	129488448	129488482	(8906235)	+	G-rich	Low_complexity	1	35	(0)	4182951
23	23.4	1.8	7.2	chr9	129488514	129488622	(8906095)	+	(CGCCC)n	Simple_repeat	1	111	(0)	4182952
245	23.7	2.1	0.0	chr9	129488847	129488932	(8905785)	+	MIR3	SINE/MIR	53	147	(121)	4182953
255	22.9	1.6	1.6	chr9	129488970	129489031	(8905686)	C	MIR3	SINE/MIR	(66)	142	81	4182954
53	15.9	8.3	0.0	chr9	130835649	130835781	(7558936)	+	(TC)n	Simple_repeat	1	144	(0)	4185898
23717	6.5	0.7	0.2	chr9	131342267	131345525	(7049192)	C	L1PA6	LINE/L1	(2882)	3264	5	4186870
1976	17.3	4.8	3.5	chr9	133168706	133169077	(5225640)	C	MER21A	LTR/ERVL	(244)	687	311	4190181
1286	15.0	5.5	17.2	chr9	133169238	133169592	(5225125)	C	MER21A	LTR/ERVL	(620)	311	1	4190181
285	31.9	13.6	1.0	chr9	133584631	133584823	(4809894)	C	L2c	LINE/L2	(160)	3215	2995	4190799
13	17.3	5.1	0.0	chr9	135396210	135396248	(2998469)	+	G-rich	Low_complexity	1	41	(0)	4193152
2143	15.3	1.8	0.0	chr9	135396329	135396661	(2998056)	+	MER1B	DNA/hAT-Charlie	1	339	(0)	4193153
2116	11.3	0.7	1.7	chr9	135475245	135475431	(2919286)	C	AluSq2	SINE/Alu	(0)	313	132	4193287
186	39.8	2.4	1.6	chr9	136306889	136307013	(2087704)	+	MIRb	SINE/MIR	92	217	(51)	4194246
727	13.5	6.3	2.7	chr9	136307255	136309004	(2085713)	+	(AC)n	Simple_repeat	1	1861	(0)	4194247
11824	10.8	1.2	1.2	chr9	136558806	136560122	(1834595)	+	MSTA-int	LTR/ERVL-MaLR	3	1329	(302)	4194491
271	25.0	10.1	0.0	chr9	136800639	136800754	(1593963)	+	MamTip1	DNA/hAT-Tip100	67	195	(72)	4194822
13	20.1	5.0	0.0	chr9	137459140	137459179	(935538)	+	(CGC)n	Simple_repeat	1	42	(0)	4195657
47	10.1	0.0	0.0	chr9	137459192	137459265	(935452)	+	(GCTCGG)n	Simple_repeat	1	74	(0)	4195658
23851	6.3	0.8	0.1	chrX	3059321	3065435	(152975460)	+	L1PA6	LINE/L1	1	6143	(11)	4364161
26	3.2	0.0	2.9	chrX	10015304	10015337	(146025558)	+	(GGC)n	Simple_repeat	1	34	(0)	4375804
778	18.7	1.8	0.0	chrX	10637805	10637970	(145402925)	+	L1MD3	LINE/L1	7822	7990	(5)	4376784
24355	6.1	1.3	0.1	chrX	10638085	10644167	(145396728)	+	L1PA5	LINE/L1	6	6154	(0)	4376785
25323	4.6	0.1	0.0	chrX	10715060	10721211	(145319684)	+	L1PA4	LINE/L1	1	6155	(0)	4376911
10351	10.4	3.1	4.8	chrX	11854325	11855932	(144184963)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	4378671
1837	13.6	2.3	5.1	chrX	13692021	13692336	(142348559)	+	AluJo	SINE/Alu	1	307	(5)	4381614
21206	8.7	0.5	2.9	chrX	14683911	14688939	(141351956)	C	L1PA5	LINE/L1	(1246)	4900	11	4383083
26301	5.9	0.6	0.0	chrX	18734132	18740262	(137300633)	C	L1PA5	LINE/L1	(2)	6325	177	4390077
27159	4.5	0.2	0.1	chrX	19273370	19279507	(136761388)	C	L1PA4	LINE/L1	(0)	6155	7	4391054
57	0.0	0.0	0.0	chrX	19990923	19990973	(136049922)	+	(CCG)n	Simple_repeat	1	51	(0)	4392338
16	7.4	0.0	6.1	chrX	19991076	19991108	(136049787)	+	(CCGCC)n	Simple_repeat	1	33	(0)	4392339
248	25.2	11.4	5.8	chrX	20067894	20068049	(135972846)	C	MamTip3	DNA/hAT-Tip100	(4)	496	331	4392475
11095	12.2	1.9	0.1	chrX	20541613	20543212	(135497683)	+	THE1D-int	LTR/ERVL-MaLR	3	1631	(0)	4393340
24852	6.8	0.8	0.1	chrX	23357662	23363791	(132677104)	C	L1PA6	LINE/L1	(2)	6325	174	4397396
8873	9.8	1.5	0.0	chrX	23458350	23459578	(132581317)	C	L1PA4	LINE/L1	(4905)	1250	3	4397508
9848	12.0	1.8	1.6	chrX	23459579	23459951	(132580944)	C	L1MA2	LINE/L1	(2359)	5206	4849	4397507
2313	17.9	13.9	4.7	chrX	23557096	23557633	(132483262)	C	LTR4	LTR/ERV1	(0)	596	1	4397630
702	18.0	3.5	8.7	chrX	23743552	23743611	(132297284)	C	MER5B	DNA/hAT-Charlie	(5)	173	123	4397948
2318	9.3	0.7	0.0	chrX	23743612	23743911	(132296984)	+	AluSx1	SINE/Alu	1	302	(10)	4397949
11711	9.6	0.4	0.1	chrX	27239585	27241159	(128799736)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	4403524
25726	6.3	0.3	0.7	chrX	27758586	27764733	(128276162)	+	L1PA5	LINE/L1	12	6141	(13)	4404297
11184	9.6	0.1	0.0	chrX	30429225	30430739	(125610156)	+	L1P1	LINE/L1	11	1526	(4629)	4408173
2729	12.4	0.9	9.1	chrX	30800160	30806701	(125234194)	+	(GCCTT)n	Simple_repeat	5	6017	(0)	4408796
27365	4.7	0.1	0.0	chrX	31077317	31083463	(124957432)	C	L1PA4	LINE/L1	(2)	6153	1	4409249
7729	9.1	0.1	0.3	chrX	34457627	34458682	(121582213)	+	L1P1	LINE/L1	4	1057	(5098)	4413831
10087	12.9	3.7	0.3	chrX	35304646	35306171	(120734724)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	4414909
26141	5.6	0.3	0.0	chrX	36700199	36706334	(119334561)	C	L1PA4	LINE/L1	(2)	6153	2	4416751
17535	6.7	0.1	3.8	chrX	37298931	37301717	(118739178)	C	L1P2	LINE/L1	(3482)	2837	174	4417229
24254	6.1	0.4	0.5	chrX	37581788	37587934	(118452961)	C	L1PA5	LINE/L1	(6)	6148	11	4417619
26099	6.1	0.3	0.0	chrX	39180370	39186499	(116854396)	C	L1PA5	LINE/L1	(0)	6154	11	4420123
15	8.5	0.0	0.0	chrX	39954029	39954053	(116086842)	+	(GGCA)n	Simple_repeat	1	25	(0)	4421512
12140	8.2	0.8	0.5	chrX	40430712	40432287	(115608608)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	4422448
22619	7.8	1.7	2.2	chrX	42810744	42816960	(113223935)	C	L1PA6	LINE/L1	(4)	6150	1	4426482
1546	24.7	5.1	0.5	chrX	44432391	44432805	(111608090)	+	LTR16A	LTR/ERVL	17	451	(0)	4428851
876	16.5	0.0	0.0	chrX	44432837	44432963	(111607932)	+	AluJo	SINE/Alu	1	127	(185)	4428852
24963	4.8	0.3	0.1	chrX	44983415	44989548	(111051347)	C	L1PA4	LINE/L1	(3)	6152	3	4430140
11354	10.6	1.9	0.1	chrX	45368202	45369803	(110671092)	+	MSTA-int	LTR/ERVL-MaLR	1	1631	(0)	4430706
22871	7.1	0.3	0.5	chrX	46074555	46080736	(109960159)	C	L1PA6	LINE/L1	(0)	6154	1	4431632
681	33.5	8.4	0.3	chrX	46080741	46081078	(109959817)	C	L1MEi	LINE/L1	(1472)	740	373	4431633
24439	5.6	0.3	0.3	chrX	46103861	46110008	(109930887)	+	L1PA4	LINE/L1	1	6150	(5)	4431658
228	26.2	18.9	2.7	chrX	47581884	47582068	(108458827)	+	L2b	LINE/L2	3194	3425	(1)	4434474
16	21.1	4.1	0.0	chrX	47582233	47582281	(108458614)	+	G-rich	Low_complexity	1	51	(0)	4434475
431	28.9	10.9	6.4	chrX	47760043	47760505	(108280390)	+	L1ME4a	LINE/L1	5295	5792	(332)	4434794
10054	9.8	9.1	0.7	chrX	49897298	49898787	(106142108)	+	THE1D-int	LTR/ERVL-MaLR	5	1631	(0)	4438547
26051	5.6	0.8	0.0	chrX	51991321	51997421	(104043474)	C	L1PA4	LINE/L1	(5)	6150	1	4441398
25438	7.0	0.1	0.1	chrX	52170778	52176924	(103863971)	+	L1PA5	LINE/L1	1	6149	(5)	4441557
24628	5.6	0.1	0.1	chrX	52291786	52297932	(103742963)	+	L1PA4	LINE/L1	2	6154	(1)	4441672
9440	7.3	1.7	0.0	chrX	52298726	52299985	(103740910)	+	L1P2	LINE/L1	1	1282	(4902)	4441675
25003	7.2	0.3	1.0	chrX	52843473	52849671	(103191224)	C	L1PA6	LINE/L1	(1)	6326	189	4442606
18568	9.1	0.5	2.4	chrX	53848154	53854569	(102186326)	C	L1PA4	LINE/L1	(0)	6155	1	4444521
19313	6.0	0.1	0.1	chrX	54697500	54702045	(101338850)	+	L1P1	LINE/L1	184	4726	(1593)	4446286
7989	9.9	0.4	0.5	chrX	55990523	55991645	(100049250)	C	L1PA4	LINE/L1	(5028)	1127	7	4447722
20529	7.5	0.7	0.3	chrX	56103031	56107860	(99933035)	C	L1P2	LINE/L1	(1313)	4833	1	4447830
25755	10.0	2.5	2.4	chrX	56157404	56162912	(99877983)	C	L1PA4	LINE/L1	(520)	5635	1	4447903
14699	8.8	0.5	0.8	chrX	56419863	56421784	(99619111)	C	L1P1	LINE/L1	(4248)	1907	2	4448171
25421	7.0	0.4	0.0	chrX	56455200	56461248	(99579647)	C	L1PA3	LINE/L1	(0)	6470	10	4448200
23850	6.9	0.2	0.1	chrX	56893932	56900071	(99140824)	+	L1PA4	LINE/L1	4	6153	(2)	4448631
15535	8.5	0.8	0.2	chrX	57087584	57091137	(98949758)	C	L1P1	LINE/L1	(2559)	3587	11	4448805
23279	7.8	0.7	0.1	chrX	57863195	57869305	(98171590)	+	L1PA5	LINE/L1	3	6154	(0)	4449394
16452	9.1	0.3	0.0	chrX	62858085	62860593	(93180302)	+	L1PA4	LINE/L1	1	2513	(3633)	4449730
21113	8.6	1.2	0.0	chrX	63286005	63292073	(92748822)	C	L1PA4	LINE/L1	(4)	6151	7	4450024
23537	7.2	2.3	0.0	chrX	63446464	63452482	(92588413)	C	L1PA5	LINE/L1	(5)	6149	9	4450169
17118	7.9	0.6	0.6	chrX	63478022	63479233	(92561662)	+	L1PA6	LINE/L1	176	1389	(4968)	4450192
9430	13.2	1.7	11.5	chrX	63777435	63779244	(92261651)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1631	3	4450569
23855	6.6	0.4	1.1	chrX	64282841	64289023	(91751872)	+	L1PA5	LINE/L1	2	6147	(7)	4451155
15545	8.9	2.2	0.1	chrX	64474499	64478086	(91562809)	C	L1P2	LINE/L1	(2492)	3654	4	4451380
7847	10.8	0.3	0.1	chrX	64512975	64514135	(91526760)	+	L1P1	LINE/L1	7	1170	(4985)	4451400
24897	8.9	1.4	1.3	chrX	64689978	64695987	(91344908)	C	L1PA5	LINE/L1	(11)	6143	126	4451626
16336	7.2	0.6	0.0	chrX	65454004	65456377	(90584518)	+	L1PA4	LINE/L1	3	2390	(3756)	4452345
24279	8.9	0.3	0.3	chrX	67234098	67239007	(88801888)	+	L1PA5	LINE/L1	2	4918	(1228)	4454622
24078	6.5	0.3	0.2	chrX	67703641	67709776	(88331119)	C	L1PA5	LINE/L1	(0)	6154	13	4455167
26692	5.2	0.2	0.2	chrX	70363246	70369397	(85671498)	C	L1PA4	LINE/L1	(0)	6155	1	4459545
10473	10.0	4.6	0.4	chrX	70586750	70588262	(85452633)	+	THE1D-int	LTR/ERVL-MaLR	1	1580	(0)	4459911
26363	5.3	0.3	0.0	chrX	71837933	71844064	(84196831)	C	L1PA4	LINE/L1	(0)	6155	7	4462255
24212	6.4	0.3	0.1	chrX	73281378	73287502	(82753393)	+	L1PA4	LINE/L1	13	6150	(5)	4464374
12	16.5	0.0	0.0	chrX	73701636	73701662	(82339233)	+	(ATAA)n	Simple_repeat	1	27	(0)	4464669
23468	7.3	1.3	0.2	chrX	73701956	73707545	(82333350)	+	L1PA6	LINE/L1	521	6154	(0)	4464670
7274	9.2	0.4	0.0	chrX	73767930	73768939	(82271956)	+	L1PA6	LINE/L1	9	1022	(5162)	4464728
15	21.4	4.4	0.0	chrX	73944061	73944105	(82096790)	+	A-rich	Low_complexity	1	47	(0)	4464970
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
25375	6.2	0.4	0.1	chrX	74033944	74040075	(82000820)	C	L1PA5	LINE/L1	(0)	6154	13	4465106
4172	11.9	0.3	3.4	chrX	74089270	74090212	(81950683)	+	L1M2	LINE/L1	2940	3843	(3365)	4465163
4314	17.2	1.7	0.4	chrX	74090223	74090965	(81949930)	C	MSTA-int	LTR/ERVL-MaLR	(898)	753	1	4465168
26382	5.5	0.3	0.2	chrX	74474479	74480631	(81560264)	C	L1PA4	LINE/L1	(0)	6155	1	4465716
27387	4.4	0.2	0.0	chrX	75183023	75189043	(80851852)	C	L1PA5	LINE/L1	(0)	6154	124	4466533
16414	9.2	0.8	0.0	chrX	75189045	75192098	(80848797)	C	L1P1	LINE/L1	(3058)	3088	11	4466532
24219	6.3	0.5	0.1	chrX	75596509	75602623	(80438272)	C	L1PA4	LINE/L1	(4)	6151	9	4466892
24777	6.2	0.3	0.1	chrX	75616400	75622529	(80418366)	+	L1PA4	LINE/L1	1	6144	(11)	4466911
11937	8.5	2.9	0.0	chrX	76260042	76261636	(79779259)	C	L1PA6	LINE/L1	(4534)	1823	181	4467379
25669	7.3	2.0	0.3	chrX	76414841	76420181	(79620714)	+	L1P2	LINE/L1	7	5433	(722)	4467482
15655	9.1	0.7	0.5	chrX	76896216	76897983	(79142912)	+	L1P1	LINE/L1	1	1781	(4374)	4467830
25375	6.9	0.3	0.0	chrX	77089275	77095414	(78945481)	+	L1PA4	LINE/L1	1	6155	(0)	4468004
16368	8.9	0.4	0.1	chrX	77101383	77103550	(78937345)	C	L1PA4	LINE/L1	(3979)	2176	1	4468015
15141	13.9	3.4	0.3	chrX	77268155	77274122	(78766773)	+	L1PA5	LINE/L1	5	6154	(0)	4468155
22329	8.6	0.3	0.1	chrX	77333959	77340098	(78700797)	+	L1PA6	LINE/L1	1	6141	(13)	4468180
26562	5.9	0.2	0.1	chrX	77470642	77476783	(78564112)	+	L1PA5	LINE/L1	11	6154	(0)	4468361
18063	5.6	0.5	0.1	chrX	77843843	77847573	(78193322)	C	L1P1	LINE/L1	(2391)	3755	9	4468971
6779	9.8	0.4	0.0	chrX	78300831	78301787	(77739108)	C	THE1B-int	LTR/ERVL-MaLR	(619)	961	1	4469690
24731	7.3	0.6	0.4	chrX	79026595	79032726	(77008169)	C	L1PA5	LINE/L1	(0)	6154	11	4470445
23550	9.1	1.8	1.4	chrX	79493852	79498668	(76542227)	+	L1PA4	LINE/L1	11	4848	(1298)	4470913
22236	7.5	0.4	0.5	chrX	79654261	79656588	(76384307)	C	L1PA6	LINE/L1	(3831)	2315	6	4471065
24986	7.2	0.5	0.1	chrX	80060559	80066695	(75974200)	C	L1PA6	LINE/L1	(11)	6143	1	4471401
8446	9.8	1.8	0.5	chrX	80598602	80599846	(75441049)	C	L1P1	LINE/L1	(4891)	1264	3	4471971
25837	6.0	0.2	0.1	chrX	80650596	80656722	(75384173)	+	L1PA5	LINE/L1	11	6147	(7)	4472024
16829	7.8	1.7	0.2	chrX	81063697	81066783	(74974112)	+	L1PA6	LINE/L1	174	3294	(3025)	4472486
20608	8.2	0.3	0.1	chrX	81683941	81688835	(74352060)	+	L1P1	LINE/L1	1	4905	(1241)	4473111
9994	14.2	1.3	2.6	chrX	81728788	81730388	(74310507)	+	THE1B-int	LTR/ERVL-MaLR	2	1580	(0)	4473148
9165	11.7	8.4	4.5	chrX	82781379	82782893	(73258002)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	4474235
24530	7.2	1.3	0.1	chrX	83407136	83413200	(72627695)	+	L1PA5	LINE/L1	5	6152	(2)	4474872
9398	9.8	0.3	1.4	chrX	84273927	84275216	(71765679)	C	THE1B-int	LTR/ERVL-MaLR	(302)	1278	3	4475775
7057	11.5	5.8	5.7	chrX	84540616	84541817	(71499078)	+	THE1D-int	LTR/ERVL-MaLR	1	1203	(377)	4476055
3037	32.3	4.3	2.6	chrX	84707148	84708555	(71332340)	C	MER57A-int	LTR/ERV1	(3922)	3283	1121	4476216
6295	4.8	0.1	0.0	chrX	86053540	86054306	(69986589)	C	L1PA5	LINE/L1	(3)	6151	5384	4477668
3691	13.1	0.2	0.2	chrX	86054299	86054856	(69986039)	C	L1P2	LINE/L1	(5623)	561	4	4477669
3593	15.1	4.7	2.2	chrX	87369609	87370278	(68670617)	+	Tigger2b_Pri	DNA/TcMar-Tigger	2	688	(380)	4479057
6509	22.8	1.6	1.3	chrX	87370285	87373471	(68667424)	+	L1PA15	LINE/L1	14	3622	(3144)	4479058
8457	21.6	3.0	1.9	chrX	88788586	88790634	(67250261)	C	L1PA12	LINE/L1	(4728)	2875	24	4480663
10548	10.7	2.3	2.7	chrX	94195964	94197550	(61843345)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	4486656
9722	14.0	4.1	0.8	chrX	94634497	94636071	(61404824)	+	THE1C-int	LTR/ERVL-MaLR	3	1631	(0)	4487171
7983	12.3	8.0	0.6	chrX	95696777	95698290	(60342605)	+	THE1D-int	LTR/ERVL-MaLR	5	1631	(0)	4488224
683	8.4	0.0	0.0	chrX	96486664	96486758	(59554137)	+	L1PA4	LINE/L1	4	98	(6057)	4489198
25063	4.5	0.5	0.1	chrX	96486744	96492571	(59548324)	+	L1PA4	LINE/L1	297	6153	(2)	4489198
24921	6.3	0.5	0.1	chrX	96809519	96815659	(59225236)	C	L1PA6	LINE/L1	(1)	6153	6	4489695
1706	14.5	0.0	2.3	chrX	96835812	96836073	(59204822)	C	AluJb	SINE/Alu	(14)	298	43	4489734
405	6.7	0.0	9.6	chrX	96836102	96836184	(59204711)	C	L1PB1	LINE/L1	(0)	6151	6077	4489735
24111	7.3	0.7	0.6	chrX	97409399	97414370	(58626525)	+	L1PA6	LINE/L1	174	5129	(1190)	4490662
198	27.8	21.1	0.0	chrX	99805459	99805555	(56235340)	+	MIRc	SINE/MIR	3	125	(143)	4493534
26399	5.0	0.1	0.1	chrX	99805557	99811344	(56229551)	+	L1PA5	LINE/L1	361	6147	(7)	4493535
23801	6.4	0.6	0.5	chrX	101524343	101530496	(54510399)	+	L1PA6	LINE/L1	5	6154	(0)	4496172
7621	11.6	3.2	0.8	chrX	101811840	101813040	(54227855)	C	L1P1	LINE/L1	(4913)	1242	11	4496514
24564	6.4	0.8	0.3	chrX	102191059	102197200	(53843695)	C	L1PA3	LINE/L1	(0)	6155	4	4496957
25441	5.2	0.2	0.2	chrX	102574301	102580448	(53460447)	+	L1PA3	LINE/L1	11	6155	(0)	4497416
11890	8.9	1.1	0.1	chrX	102817567	102819130	(53221765)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	4497672
26656	6.0	0.8	0.1	chrX	103897539	103903266	(52137629)	C	L1PA8A	LINE/L1	(347)	5957	176	4499306
8382	10.9	5.9	15.2	chrX	104762299	104763542	(51277353)	C	THE1C-int	LTR/ERVL-MaLR	(302)	1278	1	4500648
23754	7.5	0.4	0.1	chrX	104889805	104895934	(51144961)	C	L1PA5	LINE/L1	(5)	6149	1	4500824
30033	13.5	3.9	2.5	chrX	104971372	104975995	(51064900)	C	MER66-int	LTR/ERV1	(330)	6346	35	4500909
25564	4.9	0.7	0.7	chrX	105959687	105965737	(50075158)	+	L1PA4	LINE/L1	130	6153	(2)	4502234
26431	5.2	0.1	0.1	chrX	106573140	106579290	(49461605)	C	L1PA4	LINE/L1	(2)	6153	1	4502886
860	28.9	3.2	1.9	chrX	106610546	106610855	(49430040)	+	L2a	LINE/L2	2925	3238	(188)	4502929
242	23.3	2.7	2.7	chrX	106610981	106611055	(49429840)	+	L2a	LINE/L2	3350	3424	(2)	4502929
18	21.0	0.0	0.0	chrX	107429524	107429558	(48611337)	+	A-rich	Low_complexity	1	35	(0)	4504144
24911	5.0	0.3	0.1	chrX	107885133	107891264	(48149631)	C	L1PA4	LINE/L1	(12)	6143	1	4504998
16598	6.3	0.3	0.0	chrX	108011422	108015737	(48025158)	+	L1P1	LINE/L1	4	4330	(1816)	4505178
25786	5.7	0.1	0.0	chrX	108542110	108548255	(47492640)	C	L1PA5	LINE/L1	(1)	6153	3	4505956
17222	9.0	0.8	0.2	chrX	108800832	108805190	(47235705)	+	L1PA6	LINE/L1	178	4541	(1778)	4506236
9891	11.6	5.1	1.2	chrX	108895932	108897450	(47143445)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	4506324
10208	16.9	3.4	2.5	chrX	108901993	108903884	(47137011)	+	L1PBa	LINE/L1	6	1915	(4948)	4506326
2070	11.8	0.0	0.0	chrX	108903894	108904182	(47136713)	+	L1P1	LINE/L1	11	299	(5856)	4506327
25211	6.5	0.3	0.1	chrX	108904214	108909430	(47131465)	+	L1P1	LINE/L1	560	5785	(369)	4506327
1347	14.8	0.0	0.0	chrX	108930919	108931120	(47109775)	+	THE1D-int	LTR/ERVL-MaLR	552	753	(827)	4506352
10367	12.3	0.7	0.6	chrX	108931123	108933689	(47107206)	C	L1MA2	LINE/L1	(70)	7653	5082	4506353
24533	7.9	0.3	0.3	chrX	109010404	109015566	(47025329)	+	L1PA5	LINE/L1	22	5193	(953)	4506437
25938	5.6	1.0	0.1	chrX	109066648	109072737	(46968158)	C	L1PA4	LINE/L1	(4)	6151	1	4506490
16598	8.6	0.3	0.1	chrX	109228791	109233222	(46807673)	+	L1PA6	LINE/L1	3	4428	(1718)	4506610
22292	8.3	0.3	0.4	chrX	109242995	109249165	(46791730)	C	L1PA6	LINE/L1	(3)	6151	5	4506616
36	5.2	0.0	0.0	chrX	109249421	109249460	(46791435)	+	(GT)n	Simple_repeat	1	40	(0)	4506617
24244	6.6	0.8	0.2	chrX	110229539	110232609	(45808286)	+	L1PA6	LINE/L1	180	3254	(3065)	4508111
24930	5.7	0.1	0.2	chrX	110640009	110646163	(45394732)	C	L1PA4	LINE/L1	(0)	6155	2	4508677
21775	8.0	1.6	0.0	chrX	110898395	110904467	(45136428)	C	L1PA6	LINE/L1	(0)	6154	2	4509045
22900	7.1	1.0	0.1	chrX	111784453	111790569	(44250326)	+	L1PA6	LINE/L1	5	6152	(2)	4510409
10631	11.7	3.9	0.3	chrX	113403139	113404706	(42636189)	+	THE1D-int	LTR/ERVL-MaLR	4	1630	(1)	4512754
25210	6.3	0.3	0.0	chrX	113479272	113485406	(42555489)	+	L1PA5	LINE/L1	1	6153	(1)	4512826
7519	16.7	0.3	0.2	chrX	114931813	114933001	(41107894)	C	MSTA-int	LTR/ERVL-MaLR	(1)	1630	440	4514702
11207	11.3	1.5	0.3	chrX	115203341	115204951	(40835944)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	4515086
8228	8.9	1.1	0.0	chrX	116068468	116069581	(39971314)	C	L1P1	LINE/L1	(5038)	1465	341	4516265
975	25.7	4.4	1.3	chrX	116069582	116069888	(39971007)	C	L1MA8	LINE/L1	(1871)	4773	4457	4516263
11055	9.7	0.1	0.0	chrX	116252707	116254212	(39786683)	+	L1PA4	LINE/L1	1	1508	(4647)	4516440
11713	9.8	0.4	0.0	chrX	116410424	116411997	(39628898)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	4516670
24525	4.8	0.4	0.5	chrX	118241707	118247865	(37793030)	+	L1PA4	LINE/L1	7	6155	(0)	4518840
1002	7.0	0.8	0.0	chrX	119753660	119753788	(36287107)	+	FLAM_C	SINE/Alu	2	131	(12)	4521751
26488	5.8	0.1	0.1	chrX	120385254	120391208	(35649687)	C	L1PA5	LINE/L1	(190)	5964	13	4522852
16207	7.4	1.2	0.2	chrX	120811539	120814030	(35226865)	+	L1P2	LINE/L1	4	2506	(3640)	4523658
13	8.5	4.0	0.0	chrX	121047422	121047446	(34993449)	+	(CAGGC)n	Simple_repeat	1	26	(0)	4523881
11672	9.2	0.8	0.2	chrX	121137242	121138812	(34902083)	C	THE1A-int	LTR/ERVL-MaLR	(0)	1580	1	4524026
5156	8.6	0.6	0.7	chrX	122915432	122916144	(33124751)	C	L1PA8	LINE/L1	(0)	6357	5646	4526003
12317	7.1	0.7	0.7	chrX	122916147	122918919	(33121976)	+	L1PA5	LINE/L1	548	3316	(2830)	4526004
4348	10.2	5.5	7.4	chrX	122972119	122972859	(33068036)	+	THE1C-int	LTR/ERVL-MaLR	1	726	(854)	4526069
2322	10.1	4.8	1.2	chrX	122972856	122973197	(33067698)	+	THE1C	LTR/ERVL-MaLR	21	375	(0)	4526069
12160	8.8	0.3	0.1	chrX	123758311	123759862	(32281033)	+	THE1B-int	LTR/ERVL-MaLR	26	1580	(0)	4527255
9697	13.3	1.9	6.8	chrX	123931976	123932953	(32107942)	+	THE1C-int	LTR/ERVL-MaLR	449	1407	(224)	4527739
26237	4.7	0.8	0.1	chrX	124104426	124110535	(31930360)	C	L1PA4	LINE/L1	(3)	6152	1	4528086
11663	9.5	0.4	0.0	chrX	125265690	125267263	(30773632)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	4529912
25563	5.4	0.5	0.0	chrX	126383151	126389276	(29651619)	+	L1PA4	LINE/L1	4	6155	(0)	4531105
10515	11.4	3.7	0.4	chrX	126493584	126495109	(29545786)	+	THE1B-int	LTR/ERVL-MaLR	1	1579	(1)	4531211
23125	7.8	1.1	0.0	chrX	126946791	126952887	(29088008)	+	L1PA5	LINE/L1	5	6154	(0)	4531720
24048	7.6	0.7	0.1	chrX	127050834	127056950	(28983945)	C	L1PA6	LINE/L1	(11)	6641	505	4531838
9524	12.8	4.9	1.4	chrX	127221412	127222934	(28817961)	+	THE1B-int	LTR/ERVL-MaLR	2	1580	(0)	4532021
25962	5.6	0.9	0.1	chrX	127788800	127794900	(28245995)	+	L1PA4	LINE/L1	4	6150	(5)	4532656
10208	11.6	2.0	2.8	chrX	128014305	128015897	(28024998)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1	4532901
4089	10.0	12.4	0.0	chrX	128954078	128954980	(27085915)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	566	4534009
1374	13.6	6.0	3.9	chrX	128954982	128955241	(27085654)	C	THE1B	LTR/ERVL-MaLR	(98)	266	1	4534009
11709	8.4	3.1	0.0	chrX	128985339	128986869	(27054026)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	4534060
24851	5.2	0.2	0.1	chrX	129240862	129246997	(26793898)	+	L1PA4	LINE/L1	7	6152	(3)	4534442
16952	10.0	1.3	0.1	chrX	131461599	131465821	(24575074)	+	L1PA5	LINE/L1	4	4315	(1831)	4538085
24613	6.4	0.0	0.0	chrX	131524491	131530619	(24510276)	+	L1PA5	LINE/L1	11	6142	(12)	4538143
24598	6.6	0.4	0.2	chrX	131989488	131995650	(24045245)	+	L1PA6	LINE/L1	1	6152	(2)	4538751
11658	9.7	0.2	1.1	chrX	132162576	132164169	(23876726)	+	THE1B-int	LTR/ERVL-MaLR	1	1580	(0)	4538984
24559	5.9	0.0	0.1	chrX	132284469	132290617	(23750278)	C	L1PA5	LINE/L1	(0)	6154	11	4539175
383	27.4	9.2	9.8	chrX	133477474	133477647	(22563248)	+	MIRb	SINE/MIR	3	175	(93)	4541026
24173	6.4	0.7	0.3	chrX	133621187	133627320	(22413575)	+	L1PA5	LINE/L1	4	6147	(7)	4541300
2264	16.4	0.0	0.0	chrX	134070290	134070637	(21970258)	+	L1M2a1	LINE/L1	762	1109	(6007)	4542052
545	27.6	1.5	0.0	chrX	134689601	134689734	(21351161)	+	MIR3	SINE/MIR	22	157	(51)	4543192
447	23.6	9.6	2.8	chrX	134689741	134689847	(21351048)	C	MER113A	DNA/hAT-Charlie	(5)	309	195	4543193
10526	10.8	6.6	0.7	chrX	135088698	135090229	(20950666)	+	THE1C-int	LTR/ERVL-MaLR	3	1631	(0)	4543927
11358	11.2	1.0	1.0	chrX	135367828	135369457	(20671438)	C	THE1D-int	LTR/ERVL-MaLR	(0)	1631	1	4544234
2358	6.2	1.0	0.7	chrX	136908670	136908959	(19131936)	C	AluSx4	SINE/Alu	(13)	297	7	4546850
989	19.8	5.5	6.5	chrX	136908960	136909065	(19131830)	C	MER33	DNA/hAT-Charlie	(177)	147	35	4546848
17	20.4	2.2	0.0	chrX	136909304	136909348	(19131547)	+	G-rich	Low_complexity	1	46	(0)	4546851
24370	5.7	0.5	0.4	chrX	136977130	136983272	(19057623)	C	L1PA5	LINE/L1	(0)	6154	1	4547012
24570	5.1	0.5	0.1	chrX	137122419	137128550	(18912345)	+	L1PA4	LINE/L1	1	6155	(0)	4547236
12246	8.9	0.3	0.0	chrX	137767832	137769461	(18271434)	C	L1PA5	LINE/L1	(4519)	1636	2	4548356
1141	22.3	5.6	1.4	chrX	137769492	137769782	(18271113)	C	L1ME3G	LINE/L1	(361)	563	260	4548355
23174	7.2	0.4	0.1	chrX	137959685	137965821	(18075074)	+	L1PA6	LINE/L1	5	6142	(12)	4548667
25265	7.1	0.5	0.3	chrX	138230740	138236890	(17804005)	+	L1PA6	LINE/L1	4	6154	(0)	4549015
411	31.1	5.3	4.4	chrX	138327241	138327442	(17713453)	C	MIRc	SINE/MIR	(61)	201	2	4549130
460	12.7	9.2	0.0	chrX	138327741	138327819	(17713076)	+	AluSz6	SINE/Alu	224	310	(2)	4549131
13	5.2	0.0	0.0	chrX	138327823	138327842	(17713053)	+	(AAC)n	Simple_repeat	1	20	(0)	4549132
24402	6.3	0.3	0.0	chrX	139259550	139265701	(16775194)	+	L1PA5	LINE/L1	11	6154	(0)	4550447
11927	8.9	0.7	0.2	chrX	139461489	139463061	(16577834)	+	THE1A-int	LTR/ERVL-MaLR	1	1580	(0)	4550711
26279	5.0	0.2	0.0	chrX	139523555	139529699	(16511196)	+	L1PA4	LINE/L1	1	6153	(2)	4550809
23789	6.7	0.4	0.1	chrX	139670316	139676461	(16364434)	C	L1PA6	LINE/L1	(3)	6151	1	4551022
2797	11.9	3.0	0.9	chrX	141002791	141003240	(15037655)	C	LTR46	LTR/ERV1	(0)	460	1	4553136
8813	13.2	6.3	4.0	chrX	141963398	141964871	(14076024)	C	THE1B-int	LTR/ERVL-MaLR	(119)	1512	3	4554530
2587	13.7	10.4	0.5	chrX	142134338	142134886	(13906009)	+	THE1D-int	LTR/ERVL-MaLR	161	866	(765)	4554791
615	19.3	0.4	0.0	chrX	142134888	142135014	(13905881)	C	L1MC	LINE/L1	(802)	5500	5369	4554792
9949	13.3	0.9	0.2	chrX	142577542	142578999	(13461896)	+	THE1B-int	LTR/ERVL-MaLR	1	1469	(111)	4555355
26368	5.0	1.0	0.0	chrX	143762306	143768395	(12272500)	C	L1PA4	LINE/L1	(0)	6155	1	4556995
10748	12.4	0.2	4.3	chrX	144007943	144009641	(12031254)	C	MSTA-int	LTR/ERVL-MaLR	(0)	1631	2	4557322
5876	13.8	2.9	0.3	chrX	144289758	144290571	(11750324)	+	MSTA-int	LTR/ERVL-MaLR	541	1371	(260)	4557696
9644	13.3	4.9	0.3	chrX	147394689	147396195	(8644700)	+	THE1C-int	LTR/ERVL-MaLR	1	1580	(0)	4561798
25117	6.5	0.3	0.2	chrX	151199827	151205995	(4834900)	+	L1PA5	LINE/L1	1	6154	(0)	4567255
24	19.4	4.5	4.3	chrX	151397071	151397159	(4643736)	+	(GCGCC)n	Simple_repeat	1	93	(0)	4567572
10327	11.4	2.7	4.1	chrX	152261260	152262861	(3778034)	C	THE1C-int	LTR/ERVL-MaLR	(0)	1580	1	4568739
22814	7.1	0.2	2.5	chrX	152289517	152295834	(3745061)	C	L1PA6	LINE/L1	(0)	6154	1	4568766
6898	11.5	1.4	1.4	chrX	153049215	153050212	(2990683)	+	THE1C-int	LTR/ERVL-MaLR	583	1580	(0)	4569778
11609	8.8	0.2	1.6	chrX	153357463	153358282	(2682613)	+	THE1B-int	LTR/ERVL-MaLR	54	861	(719)	4570152
1189	27.2	9.2	1.3	chrX	153613534	153614191	(2426704)	C	L1ME3E	LINE/L1	(39)	6203	5475	4570480
269	18.9	8.7	2.1	chrX	153614193	153614289	(2426606)	C	Tigger3d	DNA/TcMar-Tigger	(131)	190	87	4570481
22002	9.0	2.4	0.5	chrX	154668293	154671471	(1369424)	C	L1PA6	LINE/L1	(2867)	3899	621	4572252
15	21.4	3.0	5.8	chrX	155071159	155071225	(969670)	+	(CCTCCGC)n	Simple_repeat	1	69	(0)	4572850
8993	8.9	0.7	0.0	chrX	155310487	155311669	(729226)	C	THE1B-int	LTR/ERVL-MaLR	(389)	1191	1	4573196
4489	11.2	0.9	0.1	chrX	155440585	155441252	(599643)	C	THE1C-int	LTR/ERVL-MaLR	(5)	1575	903	4573342
559	19.4	0.0	0.0	chrX	155441246	155441343	(599552)	C	THE1C-int	LTR/ERVL-MaLR	(872)	759	662	4573342
509	15.1	27.5	0.0	chrX	155441336	155441477	(599418)	+	THE1-int	LTR/ERVL-MaLR	336	516	(1064)	4573343
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638
1706	19.6	0.7	1.0	chrY	11229404	11229699	(45997716)	C	AluJb	SINE/Alu	(16)	296	2	4589000
3724	21.3	5.4	10.3	chrY	11229700	11230119	(45997296)	C	LTR49-int	LTR/ERV1	(1791)	4540	4283	4588998
1464	23.6	8.9	4.8	chrY	11281374	11281813	(45945602)	C	MER21C	LTR/ERVL	(22)	916	457	4589057
632	25.3	2.2	1.7	chrY	11282071	11282251	(45945164)	C	MER5A	DNA/hAT-Charlie	(0)	189	8	4589058
1081	32.1	12.4	1.6	chrY	11282268	11282912	(45944503)	+	L2	LINE/L2	916	1640	(1779)	4589056
10957	28.2	0.5	0.1	chrY	26653859	26659290	(30568125)	+	(AATGG)n	Simple_repeat	5	5454	(0)	4607165