463	1.3	0.6	1.7	chr1	10001	10468	(248945954)	+	(TAACCC)n	Simple_repeat	1	471	(0)	1
528	6.5	1.3	4.5	chr1	180089	180998	(248775424)	+	(ACCCTA)n	Simple_repeat	1	922	(0)	268
3686	12.6	6.2	2.5	chr1	180999	181980	(248774442)	C	TAR1	Satellite/telo	(399)	1018	1	269
2198	11.0	0.7	1.3	chr1	1016061	1016360	(247940062)	C	AluSx1	SINE/Alu	(14)	298	1	1282
42	1.6	9.4	0.0	chr1	11440099	11440162	(237516260)	+	(CTAACC)n	Simple_repeat	1	70	(0)	17708
217	24.4	0.0	0.0	chr1	35404848	35404888	(213551534)	+	MIR3	SINE/MIR	147	187	(21)	68720
234	29.7	10.3	4.6	chr1	41281808	41281942	(207674480)	C	MIRb	SINE/MIR	(78)	190	42	80489
38	2.4	0.0	2.3	chr1	41281943	41281986	(207674436)	+	(ACCCTA)n	Simple_repeat	1	44	(0)	80490
234	29.7	10.3	4.6	chr1	41281987	41282023	(207674399)	C	MIRb	SINE/MIR	(227)	41	8	80489
39	0.0	0.0	0.0	chr1	78128742	78128777	(170827645)	+	(CCCTAA)n	Simple_repeat	1	36	(0)	144147
1334	13.6	0.0	9.2	chr1	78128780	78129030	(170827392)	+	AluJo	SINE/Alu	81	308	(4)	144148
3338	8.3	0.7	0.0	chr1	93442186	93442619	(155513803)	C	LTR3B	LTR/ERVK	(0)	437	1	166307
617	25.6	7.0	3.9	chr1	114230472	114230678	(134725744)	C	L1ME3A	LINE/L1	(8)	6165	5952	196265
226	29.4	19.7	0.6	chr1	114230692	114230855	(134725567)	C	L2b	LINE/L2	(558)	2861	2659	196264
2597	8.4	5.0	1.9	chr1	144101293	144106919	(104849503)	+	(TGGCTGGCT)n	Simple_repeat	1	5911	(0)	208844
27	3.5	0.0	0.0	chr1	155244402	155244431	(93711991)	+	(AAT)n	Simple_repeat	1	30	(0)	227607
59	9.6	1.1	0.0	chr1	155244786	155244875	(93711547)	+	(GAGA)n	Simple_repeat	1	91	(0)	227608
29	23.0	2.2	2.2	chr1	156842591	156842680	(92113742)	+	(CTGACC)n	Simple_repeat	1	92	(0)	230859
11	45.0	1.1	0.0	chr1	156842845	156842938	(92113484)	+	(ACCCTA)n	Simple_repeat	1	95	(0)	230860
1686	20.0	2.6	4.1	chr1	224950675	224951026	(24005396)	+	MER58D	DNA/hAT-Charlie	2	359	(27)	333395
2194	13.3	0.7	0.0	chr1	226465224	226465524	(22490898)	C	AluSp	SINE/Alu	(9)	304	2	335957
13	30.6	3.0	0.0	chr1	226465525	226465545	(22490877)	+	(CCCTAA)n	Simple_repeat	5	25	(0)	335958
32	8.8	0.0	0.0	chr1	226465651	226465698	(22490724)	+	(CCTAAC)n	Simple_repeat	1	48	(0)	335959
40	29.6	0.0	0.0	chr1	228635559	228635667	(20320755)	+	(CA)n	Simple_repeat	1	109	(0)	338951
63	31.5	1.7	0.8	chr1	228635679	228635919	(20320503)	+	GA-rich	Low_complexity	1	245	(0)	338952
2937	7.3	0.0	0.0	chr1	236096779	236097148	(12859274)	C	LTR10A	LTR/ERV1	(62)	547	178	350992
287	22.7	0.0	0.0	chr1	236097161	236097235	(12859187)	C	LTR10A	LTR/ERV1	(357)	252	178	350993
337	20.8	2.0	0.6	chr1	236097248	236097348	(12859074)	C	LTR10A	LTR/ERV1	(357)	252	106	350994
1140	18.7	6.7	0.4	chr1	236097335	236097570	(12858852)	C	LTR10A	LTR/ERV1	(357)	252	1	350994
8798	3.3	24.6	0.0	chr1	248944224	248945548	(10874)	+	TAR1	Satellite/telo	314	2069	(42)	371028
676	4.0	0.7	3.4	chr1	248945549	248946422	(10000)	+	(AGGGTT)n	Simple_repeat	1	880	(0)	371029
10242	15.7	5.7	1.9	chr10	63376	64278	(133733144)	C	L1MA2	LINE/L1	(5003)	2562	1591	371061
164	13.0	0.6	4.8	chr10	64279	64611	(133732811)	+	(CCCTAA)n	Simple_repeat	1	335	(0)	371068
11	20.7	5.1	0.0	chr10	3943848	3943886	(129853536)	+	(GTGCAG)n	Simple_repeat	1	41	(0)	375810
105	11.7	0.0	3.7	chr10	3943994	3944183	(129853239)	+	(CCTAAC)n	Simple_repeat	1	190	(0)	375811
394	24.2	11.7	9.5	chr10	3944274	3944349	(129853073)	C	MLT1J	LTR/ERVL-MaLR	(4)	508	438	375812
63	19.4	0.0	1.5	chr10	4069079	4069212	(129728210)	+	(TAACCC)n	Simple_repeat	1	134	(0)	375992
838	33.1	9.3	2.1	chr10	4069213	4069928	(129727494)	+	L2a	LINE/L2	2348	3127	(299)	375991
81	9.5	0.0	0.0	chr10	8468436	8468551	(125328871)	+	(TAACCC)n	Simple_repeat	1	116	(0)	382795
20	0.0	0.0	0.0	chr10	8468639	8468660	(125328762)	+	(A)n	Simple_repeat	1	22	(0)	382796
1814	15.7	0.3	1.0	chr10	8468701	8468993	(125328429)	+	AluJr	SINE/Alu	9	299	(13)	382797
21	15.9	0.0	0.0	chr10	26860600	26860641	(106936781)	+	(GGTTGG)n	Simple_repeat	1	42	(0)	412438
12	26.3	0.0	0.0	chr10	46295233	46295269	(87502153)	+	G-rich	Low_complexity	1	37	(0)	437457
46	9.3	0.0	1.4	chr10	46295439	46295510	(87501912)	+	(GTTAGA)n	Simple_repeat	1	72	(0)	437458
45	0.0	0.0	0.0	chr10	46295584	46295624	(87501798)	+	(GTTAGA)n	Simple_repeat	1	41	(0)	437459
20	3.4	0.0	3.1	chr10	46295672	46295703	(87501719)	+	(GGTTAG)n	Simple_repeat	1	32	(0)	437460
33	0.0	0.0	0.0	chr10	46296119	46296149	(87501273)	+	(CCTAAC)n	Simple_repeat	1	31	(0)	437461
20	16.7	0.0	0.0	chr10	93702254	93702287	(40095135)	+	A-rich	Low_complexity	1	34	(0)	511623
28	0.0	0.0	0.0	chr10	93702523	93702548	(40094874)	+	(CCG)n	Simple_repeat	1	26	(0)	511624
402	18.5	1.4	5.6	chr10	133566377	133567481	(229941)	+	G-rich	Low_complexity	1	1121	(0)	572642
984	9.4	0.3	0.6	chr10	133685650	133690462	(106960)	+	BSR/Beta	Satellite	1	4799	(0)	572779
979	10.5	0.3	0.6	chr10	133761839	133765381	(32041)	+	BSR/Beta	Satellite	1	3530	(0)	572824
107	8.6	0.3	2.3	chr10	133765384	133765474	(31948)	+	(GTTAGG)n	Simple_repeat	3	92	(0)	572825
107	8.6	0.3	2.3	chr10	133765521	133765683	(31739)	+	(GTTAGG)n	Simple_repeat	6	164	(0)	572827
12	21.3	4.4	2.1	chr10	133765701	133765745	(31677)	+	(ATT)n	Simple_repeat	1	47	(0)	572828
8705	1.0	24.2	0.0	chr10	133785742	133787104	(10318)	+	TAR1	Satellite/telo	314	2111	(0)	572857
113	26.6	0.6	1.2	chr10	133787105	133787422	(10000)	+	G-rich	Low_complexity	1	320	(0)	572858
756	6.8	1.0	4.2	chr11	175280	176542	(134910080)	+	(ACCCTA)n	Simple_repeat	1	1276	(0)	573044
29	27.6	0.0	5.7	chr11	1454231	1454353	(133632269)	+	G-rich	Low_complexity	1	123	(0)	574623
27	0.0	0.0	0.0	chr11	1845831	1845856	(133240766)	+	(GGTTAG)n	Simple_repeat	1	26	(0)	575168
19	29.6	1.2	2.4	chr11	27720938	27721019	(107365603)	+	(CCCCCA)n	Simple_repeat	1	83	(0)	614400
3292	8.0	0.0	0.2	chr11	63027691	63028105	(72058517)	C	THE1B-int	LTR/ERVL-MaLR	(0)	1580	1167	663340
46	5.7	0.0	0.0	chr11	63028195	63028249	(72058373)	+	(AGGGTT)n	Simple_repeat	1	55	(0)	663341
5470	9.6	0.7	0.3	chr11	63028573	63029337	(72057285)	C	L1PB1	LINE/L1	(3)	6148	5381	663342
2228	8.5	0.0	4.6	chr11	67142369	67142557	(67944065)	+	AluSq10	SINE/Alu	1	177	(136)	671062
44	0.0	0.0	0.0	chr11	67142558	67142597	(67944025)	+	(GGGGTT)n	Simple_repeat	1	40	(0)	671063
2228	8.5	0.0	4.6	chr11	67142598	67142714	(67943908)	+	AluSq10	SINE/Alu	178	293	(20)	671062
586	21.9	10.3	0.5	chr11	67142825	67143008	(67943614)	C	L1MC5	LINE/L1	(15)	9289	9086	671064
3228	15.6	7.0	1.8	chr11	77417122	77417721	(57668901)	+	L1MC2	LINE/L1	5629	6263	(81)	689828
419	27.0	15.5	2.5	chr11	80886582	80886781	(54199841)	+	MIRb	SINE/MIR	5	242	(26)	696551
89	11.9	0.7	1.3	chr11	80886840	80886989	(54199633)	+	(TAACCC)n	Simple_repeat	1	151	(0)	696552
2559	22.4	6.2	2.7	chr11	80887187	80888079	(54198543)	C	L1ME3A	LINE/L1	(119)	6054	5127	696553
26226	2.5	0.4	0.0	chr11	94232525	94238528	(40848094)	C	L1PA2	LINE/L1	(3)	6152	124	716864
1695	18.6	1.0	0.0	chr11	98833501	98833785	(36252837)	C	AluJr	SINE/Alu	(24)	288	1	723019
1618	20.1	5.8	0.3	chr11	107459017	107459361	(27627261)	C	MLT1A0	LTR/ERVL-MaLR	(0)	365	1	734916
352	29.1	8.7	2.5	chr11	107459362	107459523	(27627099)	+	L1M5	LINE/L1	4436	4608	(1538)	734917
21	5.6	5.4	0.0	chr11	107459562	107459598	(27627024)	+	(AAAAG)n	Simple_repeat	1	39	(0)	734918
12	15.9	9.5	0.0	chr11	134118540	134118581	(968041)	+	(TCTCTG)n	Simple_repeat	1	46	(0)	776838
1921	15.7	21.1	1.1	chr11	135075695	135076563	(10059)	+	TAR1	Satellite/telo	1	1042	(938)	778016
66	0.0	0.0	0.0	chr11	135076564	135076622	(10000)	+	(GTTAGG)n	Simple_repeat	1	59	(0)	778017
6983	15.9	1.1	1.0	chr12	107710	108091	(133167218)	C	HERVP71A-int	LTR/ERV1	(2931)	4659	4278	778231
38	0.0	0.0	0.0	chr12	108092	108126	(133167183)	+	(CCCTAA)n	Simple_repeat	1	35	(0)	778233
6983	15.9	1.1	1.0	chr12	108127	108644	(133166665)	C	HERVP71A-int	LTR/ERV1	(3313)	4277	3755	778231
28	26.6	2.8	2.7	chr12	1690996	1691104	(131584205)	+	(CGG)n	Simple_repeat	1	112	(0)	781100
17	15.7	0.0	2.6	chr12	1691119	1691157	(131584152)	+	(CCCCCTC)n	Simple_repeat	1	39	(0)	781101
280	33.6	6.1	0.0	chr12	2255710	2255816	(131019493)	C	L2b	LINE/L2	(6)	3369	3256	781930
241	31.9	0.8	0.8	chr12	17097512	17097631	(116177678)	C	MLT1J-int	LTR/ERVL-MaLR	(653)	734	615	805100
3690	12.8	2.7	4.4	chr12	56758835	56759448	(76515861)	C	LTR26	LTR/ERV1	(0)	603	1	860201
1031	27.2	11.0	1.1	chr12	124266841	124267304	(9008005)	C	L1ME1	LINE/L1	(9)	6155	5644	975796
116	13.8	0.0	1.0	chr12	124267346	124267542	(9007767)	+	(CTAACC)n	Simple_repeat	1	197	(0)	975797
1004	17.8	1.1	0.5	chr12	130862112	130862297	(2413012)	C	MLT1A0	LTR/ERVL-MaLR	(178)	187	1	987354
1045	26.9	13.8	4.7	chr12	130862349	130862631	(2412678)	+	L2a	LINE/L2	2913	3196	(230)	987357
79	27.3	0.3	4.7	chr12	133241104	133241226	(34083)	+	G-rich	Low_complexity	1	111	(0)	990739
50	4.0	6.2	1.2	chr12	133241227	133241307	(34002)	+	(GGGTTAG)n	Simple_repeat	1	86	(0)	990740
79	27.3	0.3	4.7	chr12	133241308	133241479	(33830)	+	G-rich	Low_complexity	112	283	(0)	990741
2247	19.0	7.7	1.5	chr12	133264212	133264745	(10564)	+	TAR1	Satellite/telo	1499	2068	(43)	990766
27	11.5	0.0	2.0	chr12	133264868	133264924	(10385)	+	(GGGTCC)n	Simple_repeat	1	55	(0)	990767
441	0.5	0.0	0.0	chr12	133264925	133265309	(10000)	+	(GGGTTA)n	Simple_repeat	1	385	(0)	990768
21953	10.1	1.2	2.2	chr13	64827748	64834170	(49530158)	+	L1PA7	LINE/L1	4	6466	(3)	1059031
12	25.8	1.9	3.6	chr13	76992139	76992192	(37372136)	+	(GGCGCG)n	Simple_repeat	1	55	(0)	1075557
26	0.0	0.0	0.0	chr13	77326779	77326803	(37037525)	+	(CGC)n	Simple_repeat	1	25	(0)	1076032
20	13.0	0.0	0.0	chr13	77326918	77326952	(37037376)	+	(CCT)n	Simple_repeat	1	35	(0)	1076033
19	24.8	0.0	0.0	chr13	77327025	77327070	(37037258)	+	(GCC)n	Simple_repeat	1	46	(0)	1076034
4294	14.8	1.6	5.3	chr13	90603110	90603866	(23760462)	C	LTR1F1	LTR/ERV1	(0)	729	1	1093125
2488	24.9	7.1	2.1	chr13	91311236	91311954	(23052374)	C	LTR41B	LTR/ERVL	(0)	758	1	1094092
20	23.2	5.2	1.2	chr13	91398518	91398594	(22965734)	+	G-rich	Low_complexity	1	81	(0)	1094194
35	24.4	0.0	0.0	chr13	91398651	91398731	(22965597)	+	(GGC)n	Simple_repeat	1	81	(0)	1094195
343	30.4	15.1	0.0	chr13	96830923	96831113	(17533215)	C	L3	LINE/CR1	(12)	4087	3863	1102123
15	13.0	8.8	0.0	chr13	111999305	111999338	(2364990)	+	(AC)n	Simple_repeat	1	37	(0)	1123046
107	11.0	5.6	0.0	chr13	111999435	111999632	(2364696)	+	(CTAACC)n	Simple_repeat	1	209	(0)	1123047
237	24.5	8.2	2.9	chr13	113111331	113112657	(1251671)	+	(CACCTCA)n	Simple_repeat	1	1436	(0)	1124206
9431	1.8	22.6	0.4	chr13	114352578	114353941	(10387)	+	TAR1	Satellite/telo	314	2069	(42)	1125575
286	4.0	1.6	3.3	chr13	114353942	114354328	(10000)	+	(AGGGTT)n	Simple_repeat	1	393	(0)	1125576
248	27.4	11.3	1.0	chr14	50311713	50311815	(56731903)	C	MIRb	SINE/MIR	(136)	132	18	1169747
919	32.0	14.0	6.8	chr14	54006635	54007374	(53036344)	+	L2a	LINE/L2	2376	3252	(174)	1175335
2251	6.7	4.8	1.1	chr15	20340242	20344102	(81647087)	+	(AGCCAGCCA)n	Simple_repeat	1	4048	(0)	1263201
252	18.2	0.7	3.9	chr15	22232418	22233005	(79758184)	+	(TAACCC)n	Simple_repeat	1	592	(0)	1265483
297	35.5	10.7	2.6	chr15	41950746	41950956	(60040233)	+	MIRc	SINE/MIR	15	243	(25)	1294296
37	0.0	0.0	0.0	chr15	41951003	41951036	(60040153)	+	(CTAACC)n	Simple_repeat	1	34	(0)	1294297
597	29.7	7.1	0.9	chr15	41951091	41951301	(60039888)	+	MIR	SINE/MIR	38	262	(0)	1294298
3166	17.6	2.9	0.3	chr15	59962593	59963208	(42027981)	+	L1MB1	LINE/L1	5496	6127	(41)	1323040
1432	20.1	4.5	2.8	chr15	59963209	59963491	(42027698)	+	AluJb	SINE/Alu	1	288	(24)	1323041
26	0.0	8.3	0.0	chr15	59963498	59963533	(42027656)	+	(AATTT)n	Simple_repeat	1	39	(0)	1323042
13	15.0	2.4	4.7	chr15	59963534	59963570	(42027619)	+	(TTTAA)n	Simple_repeat	5	40	(0)	1323043
372	32.4	4.5	4.0	chr15	68310052	68310228	(33680961)	+	L1M5	LINE/L1	4015	4192	(1954)	1338106
33	0.0	0.0	0.0	chr15	80463472	80463502	(21527687)	+	(GGGTTA)n	Simple_repeat	1	31	(0)	1359550
2279	9.7	3.2	0.3	chr15	80463571	80463869	(21527320)	C	AluSq2	SINE/Alu	(5)	308	1	1359551
1200	15.0	11.9	8.0	chr15	90954334	90954607	(11036582)	+	AluSz6	SINE/Alu	3	288	(24)	1377405
5212	12.1	22.1	0.7	chr15	101979520	101980763	(10426)	+	TAR1	Satellite/telo	483	2068	(43)	1393518
328	3.1	1.9	3.2	chr15	101980765	101981189	(10000)	+	(GGTTAG)n	Simple_repeat	1	433	(0)	1393519
40	5.5	3.5	0.0	chr16	10001	10057	(90328288)	+	(TAACCC)n	Simple_repeat	1	59	(0)	1394055
3841	13.7	2.4	0.7	chr16	10059	11142	(90327203)	C	TAR1	Satellite/telo	(43)	1103	1	1394056
36	0.0	0.0	0.0	chr16	285926	285958	(90052387)	+	(CCCAAC)n	Simple_repeat	1	33	(0)	1394524
332	33.1	4.6	4.0	chr16	3101322	3101494	(87236851)	+	MIRb	SINE/MIR	70	243	(25)	1398495
1013	20.8	3.8	4.1	chr16	3101602	3101691	(87236654)	C	MER33	DNA/hAT-Charlie	(8)	316	232	1398496
2509	6.6	0.3	0.0	chr16	3101692	3101994	(87236351)	C	AluSp	SINE/Alu	(9)	304	1	1398497
315	35.0	8.2	3.2	chr16	14630435	14630655	(75707690)	C	L2a	LINE/L2	(3)	3423	3191	1422532
1235	18.4	12.5	0.4	chr16	14630658	14630918	(75707427)	+	AluJo	SINE/Alu	3	299	(13)	1422533
70	23.7	0.3	8.4	chr16	32462667	32462952	(57875393)	+	G-rich	Low_complexity	1	287	(0)	1461662
18245	9.8	1.1	6.9	chr16	32462959	32463658	(57874687)	C	L1PBa	LINE/L1	(961)	5901	5212	1461663
2357	5.0	5.4	2.5	chr16	33335927	33340033	(56998312)	+	(TGGCTTGGC)n	Simple_repeat	1	4327	(0)	1462585
330	24.4	1.2	2.4	chr16	34071698	34071779	(56266566)	+	AluJb	SINE/Alu	208	288	(24)	1463578
376	15.6	3.0	0.0	chr16	34097527	34097590	(56240755)	C	AluJo	SINE/Alu	(22)	290	225	1463604
36	24.2	8.0	0.0	chr16	49783214	49783364	(40554981)	+	G-rich	Low_complexity	1	163	(0)	1471104
27	3.0	2.9	0.0	chr16	49783396	49783429	(40554916)	+	(GTTAGG)n	Simple_repeat	1	35	(0)	1471105
30	2.9	2.8	0.0	chr16	49783459	49783494	(40554851)	+	(GGGTTA)n	Simple_repeat	1	37	(0)	1471106
2145	10.3	0.0	0.0	chr16	49783726	49783998	(40554347)	+	AluSc	SINE/Alu	37	309	(0)	1471107
32	3.0	0.0	0.0	chr16	66434207	66434240	(23904105)	+	(CCCCGA)n	Simple_repeat	1	34	(0)	1499732
45	0.0	0.0	0.0	chr16	75334200	75334240	(15004105)	+	(ACCCTA)n	Simple_repeat	1	41	(0)	1516561
2274	12.5	0.0	0.6	chr16	75334674	75334986	(15003359)	+	AluSz6	SINE/Alu	2	312	(0)	1516562
783	26.2	10.3	2.0	chr16	87316714	87317005	(3021340)	+	MLT1K	LTR/ERVL-MaLR	271	589	(6)	1538229
11	10.6	0.0	10.5	chr16	87317335	87317372	(3020973)	+	(AACCC)n	Simple_repeat	1	38	(0)	1538230
13	4.7	0.0	4.2	chr16	87317392	87317415	(3020930)	+	(CGCC)n	Simple_repeat	1	24	(0)	1538231
276	16.3	0.5	3.7	chr16	87524423	87525010	(2813335)	+	(GGTTAG)n	Simple_repeat	1	591	(0)	1538585
1120	25.7	8.2	1.8	chr16	87525028	87525463	(2812882)	C	MLT1C	LTR/ERVL-MaLR	(1)	466	1	1538586
16	14.9	0.0	0.0	chr16	88320950	88320980	(2017365)	+	(GAAT)n	Simple_repeat	1	31	(0)	1539804
653	13.5	7.4	0.0	chr16	88321231	88321356	(2016989)	C	MLT2C1	LTR/ERVL	(95)	302	167	1539805
33	2.9	0.0	0.0	chr16	88880226	88880260	(1458085)	+	(AACCCT)n	Simple_repeat	1	35	(0)	1540547
426	9.3	0.4	4.9	chr16	90121654	90122406	(215939)	+	(AGGGTT)n	Simple_repeat	1	756	(0)	1542391
328	5.7	1.2	3.4	chr17	113094	113583	(83143858)	+	(ACCCTA)n	Simple_repeat	1	496	(0)	1544650
1937	26.4	11.1	0.4	chr17	113636	114430	(83143011)	+	L1M4	LINE/L1	4315	5205	(941)	1544651
1438	21.5	7.8	2.2	chr17	135619	136229	(83121212)	+	L1MC	LINE/L1	4898	5546	(2239)	1544673
143	0.7	1.2	4.6	chr17	136265	136435	(83121006)	+	(CCTAAC)n	Simple_repeat	1	173	(0)	1544674
2216	9.4	0.7	0.7	chr17	1266386	1266682	(81990759)	+	AluSx1	SINE/Alu	5	301	(11)	1546734
2506	14.2	3.6	1.8	chr17	15181677	15182133	(68075308)	+	LTR39	LTR/ERV1	3	468	(315)	1572656
416	17.5	0.0	3.6	chr17	15182136	15182218	(68075223)	+	LTR39	LTR/ERV1	704	783	(0)	1572656
13	3.7	10.7	0.0	chr17	15182236	15182263	(68075178)	+	(GTTTTG)n	Simple_repeat	1	31	(0)	1572657
260	31.6	2.0	2.0	chr17	15182273	15182372	(68075069)	C	MamGypLTR2c	LTR/Gypsy	(674)	394	295	1572658
924	19.6	9.7	0.8	chr17	15182488	15182622	(68074819)	C	L1MA9	LINE/L1	(5)	6307	6152	1572659
14076	21.5	0.2	0.1	chr17	26831999	26860262	(56397179)	+	(TGGAA)n	Simple_repeat	1	28282	(0)	1585972
3988	18.3	1.0	0.9	chr17	26860263	26876740	(56380701)	+	(GAATG)n	Satellite	1	16640	(0)	1585973
1160	16.0	0.5	0.1	chr17	26880357	26885980	(56371461)	C	ALR/Alpha	Satellite/centr	(26)	5644	1	1585983
41	32.5	0.0	0.0	chr17	29293893	29294029	(53963412)	+	(TGG)n	Simple_repeat	1	137	(0)	1590288
14025	11.7	1.7	2.8	chr17	50250842	50251936	(33005505)	C	Tigger1	DNA/TcMar-Tigger	(188)	2230	1161	1631404
401	33.3	7.4	2.0	chr17	55740113	55740265	(27517176)	C	L2b	LINE/L2	(5)	3370	3209	1640158
15	8.0	3.7	0.0	chr17	55740283	55740309	(27517132)	+	(TATT)n	Simple_repeat	1	28	(0)	1640159
539	31.8	11.3	2.4	chr17	55740448	55740872	(27516569)	C	L2b	LINE/L2	(401)	3018	2551	1640158
18	14.9	0.0	2.6	chr17	56593716	56593754	(26663687)	+	(CGC)n	Simple_repeat	1	39	(0)	1641537
301	22.2	4.9	11.4	chr17	57068432	57068563	(26188878)	+	AluJb	SINE/Alu	180	302	(0)	1642585
1323	26.6	15.0	1.9	chr17	57891012	57892037	(25365404)	+	L2a	LINE/L2	2229	3426	(0)	1644053
14	18.1	0.0	0.0	chr17	66192029	66192060	(17065381)	+	(CCGCCA)n	Simple_repeat	1	32	(0)	1659801
913	20.7	20.5	0.0	chr17	68019317	68019553	(15237888)	C	AluJo	SINE/Alu	(10)	302	5	1663341
1287	14.5	7.4	3.1	chr17	68019554	68019772	(15237669)	C	L1MA4	LINE/L1	(41)	6259	6029	1663340
2208	26.9	10.8	1.9	chr17	76168029	76168966	(7088475)	C	HAL1	LINE/L1	(0)	2507	1476	1677489
1488	8.6	0.4	1.4	chr17	82359381	82361609	(895832)	+	(CCTCAGTTTC)n	Simple_repeat	1	2238	(0)	1687525
1390	21.8	7.9	1.4	chr17	83246582	83247135	(10306)	C	L1MC	LINE/L1	(2239)	5546	4952	1688732
167	14.0	0.3	2.0	chr17	83247136	83247436	(10005)	+	(GTTAGG)n	Simple_repeat	1	302	(0)	1688733
540	3.0	2.1	1.6	chr18	10001	10631	(80362654)	+	(CCCTAA)n	Simple_repeat	1	644	(0)	1689081
2168	16.4	8.3	1.8	chr18	10632	11145	(80362140)	C	TAR1	Satellite/telo	(217)	1894	1344	1689082
9408	16.6	6.0	1.2	chr18	62721	63620	(80309665)	C	L1MA2	LINE/L1	(5003)	2562	1591	1689112
319	11.7	0.3	4.0	chr18	63621	64200	(80309085)	+	(CCCTAA)n	Simple_repeat	1	582	(0)	1689118
765	16.9	0.0	0.0	chr18	94405	94522	(80278763)	C	AluSx3	SINE/Alu	(12)	299	182	1689179
97	10.8	0.6	2.9	chr18	94523	94691	(80278594)	+	(AACCCT)n	Simple_repeat	1	170	(0)	1689180
2264	11.4	0.3	0.0	chr18	94733	95039	(80278246)	+	AluSx1	SINE/Alu	1	308	(4)	1689181
36	4.9	0.0	0.0	chr18	98752	98793	(80274492)	+	(CCCTAA)n	Simple_repeat	1	42	(0)	1689188
230	9.0	0.4	1.5	chr18	105193	105469	(80267816)	+	(ACCCTA)n	Simple_repeat	1	273	(0)	1689198
263	11.9	0.0	0.0	chr18	105472	105513	(80267772)	C	TAR1	Satellite/telo	(0)	2111	2070	1689199
230	9.0	0.4	1.5	chr18	105514	105670	(80267615)	+	(ACCCTA)n	Simple_repeat	6	161	(0)	1689200
1041	10.8	0.2	0.6	chr18	105674	111670	(80261615)	C	BSR/Beta	Satellite	(42)	5974	1	1689201
16	5.3	0.0	0.0	chr18	3594007	3594026	(76779259)	+	(A)n	Simple_repeat	1	20	(0)	1694718
14633	24.4	2.1	8.2	chr18	14983885	14984641	(65388644)	+	L1PB	LINE/L1	4478	5219	(927)	1711075
124	14.0	8.1	0.3	chr18	14984642	14984938	(65388347)	+	(CCCCTAA)n	Simple_repeat	1	320	(0)	1711078
199	30.3	13.5	8.3	chr18	31680884	31681016	(48692269)	+	L2b	LINE/L2	3023	3163	(212)	1728037
28122	17.0	7.8	7.8	chr18	52790112	52792754	(27580531)	C	HUERS-P3b-int	LTR/ERV1	(7)	2901	90	1758952
78	6.2	1.0	0.9	chr18	52792755	52792858	(27580427)	+	(ATTCC)n	Simple_repeat	1	105	(0)	1758954
28122	17.0	7.8	7.8	chr18	52792859	52792933	(27580352)	C	HUERS-P3b-int	LTR/ERV1	(7329)	89	25	1758952
2462	8.0	0.3	0.0	chr18	79043065	79043366	(1329919)	+	AluY	SINE/Alu	1	303	(8)	1795097
635	24.9	2.3	8.7	chr18	79043367	79043424	(1329861)	C	L1MB8	LINE/L1	(150)	6024	5983	1795096
555	16.9	1.1	1.1	chr18	79043514	79043642	(1329643)	C	L1MB7	LINE/L1	(334)	6025	5897	1795098
1031	26.8	13.8	2.2	chr18	79200300	79200694	(1172591)	+	L1MEf	LINE/L1	2654	3070	(3249)	1795300
7182	7.1	2.7	0.0	chr18	80257324	80258281	(115004)	C	LTR13	LTR/ERVK	(0)	1007	23	1796336
237	21.8	3.7	1.3	chr18	80258293	80258942	(114343)	+	G-rich	Low_complexity	1	674	(0)	1796337
605	13.5	1.9	0.0	chr18	80258948	80259051	(114234)	C	LTR5B	LTR/ERVK	(191)	811	706	1796338
436	0.0	0.0	1.3	chr18	80262892	80263285	(110000)	+	(GTTAGG)n	Simple_repeat	1	394	(0)	1796346
252	6.5	1.3	5.3	chr19	245537	246002	(58371614)	+	(TAACCC)n	Simple_repeat	1	472	(0)	1796617
5485	10.1	23.0	1.1	chr19	246007	247536	(58370080)	C	TAR1	Satellite/telo	(43)	1864	1	1796618
155	21.8	2.7	1.9	chr19	727146	727555	(57890061)	+	(CCCTGA)n	Simple_repeat	1	421	(0)	1797468
38	13.2	0.0	5.9	chr19	2345367	2345481	(56272135)	+	(CCTAAC)n	Simple_repeat	1	108	(0)	1800586
1378	18.9	5.4	5.1	chr19	16654681	16654938	(41962678)	+	MER58B	DNA/hAT-Charlie	76	341	(0)	1834359
25	15.1	0.0	0.0	chr19	16655028	16655073	(41962543)	+	(CTAACC)n	Simple_repeat	1	46	(0)	1834361
255	22.8	1.7	0.0	chr19	16655140	16655196	(41962420)	+	MLT1K	LTR/ERVL-MaLR	547	604	(6)	1834358
101	28.6	3.7	2.2	chr19	17629664	17630091	(40987525)	+	(AACCTC)n	Simple_repeat	1	444	(0)	1836862
15	18.3	0.0	2.6	chr19	17630094	17630132	(40987484)	+	(CCCTAA)n	Simple_repeat	1	39	(0)	1836863
2416	8.1	0.0	3.4	chr19	41786057	41786378	(16831238)	C	AluSz	SINE/Alu	(1)	311	1	1873912
31	0.0	0.0	0.0	chr19	42370844	42370872	(16246744)	+	(G)n	Simple_repeat	1	29	(0)	1875128
948	25.2	10.2	2.5	chr19	46766476	46767066	(11850550)	C	L2a	LINE/L2	(203)	3223	2573	1884482
28050	17.2	1.3	0.3	chr19	57513372	57518069	(1099547)	+	HERVK3-int	LTR/ERVK	2456	7199	(3)	1907926
2524	12.0	5.2	3.9	chr19	57518074	57518488	(1099128)	+	LTR3B	LTR/ERVK	2	422	(15)	1907926
2186	12.7	0.0	1.0	chr19	57828435	57828748	(788868)	C	AluSx	SINE/Alu	(1)	311	1	1908398
1372	17.8	0.0	9.5	chr19	57828753	57828962	(788654)	C	AluJr	SINE/Alu	(17)	295	114	1908399
6286	13.7	1.6	0.7	chr19	57828963	57829955	(787661)	+	LTR5B	LTR/ERVK	1	1002	(0)	1908400
1529	16.7	0.0	7.5	chr19	57889272	57889577	(728039)	+	AluJr	SINE/Alu	11	293	(19)	1908503
2097	13.2	0.6	0.3	chr19	57889582	57889892	(727724)	+	AluSx	SINE/Alu	1	312	(0)	1908504
108	6.7	1.4	0.7	chr19	58586565	58586710	(30906)	+	(GGTTAG)n	Simple_repeat	1	148	(0)	1909775
7941	3.4	12.7	0.7	chr19	58606191	58607452	(10164)	+	TAR1	Satellite/telo	314	1748	(363)	1909801
139	3.3	0.6	2.4	chr19	58607453	58607616	(10000)	+	(GGGTTA)n	Simple_repeat	1	165	(0)	1909802
158	21.6	0.4	6.7	chr2	10006	10174	(242183355)	+	(CCCAAC)n	Simple_repeat	1	387	(124)	1910809
164	8.9	0.3	4.8	chr2	10175	10462	(242183067)	+	(ACCCTA)n	Simple_repeat	1	289	(0)	1910810
158	21.6	0.4	6.7	chr2	10463	10514	(242183015)	+	(CCCAAC)n	Simple_repeat	388	511	(0)	1910809
40	7.7	0.0	5.2	chr2	10516	10592	(242182937)	+	(ACCCTA)n	Simple_repeat	1	77	(0)	1910811
6455	13.9	14.4	5.6	chr2	10601	12198	(242181331)	C	TAR1	Satellite/telo	(218)	1893	132	1910812
220	37.6	8.6	0.0	chr2	10623126	10623274	(231570255)	+	L2	LINE/L2	2786	2948	(471)	1925083
23	16.2	2.0	0.0	chr2	26033766	26033814	(216159715)	+	G-rich	Low_complexity	1	50	(0)	1949188
385	3.9	0.0	0.0	chr2	32916230	32916625	(209276904)	+	(G)n	Simple_repeat	1	396	(0)	1961189
5477	16.8	1.8	1.7	chr2	89811301	89833976	(152359553)	+	(ATTCC)n	Simple_repeat	1	23074	(0)	2047609
2211	13.1	1.9	2.1	chr2	89835277	89841184	(152352345)	+	(TGGAA)n	Simple_repeat	1	6021	(0)	2047610
21	8.8	2.8	0.0	chr2	91478098	91478133	(150715396)	+	(CCG)n	Simple_repeat	1	37	(0)	2048369
2103	25.5	9.8	9.2	chr2	108188430	108189389	(134004140)	+	L1ME3A	LINE/L1	2425	3426	(2720)	2068906
3720	8.9	0.6	0.2	chr2	108189390	108189886	(134003643)	+	LTR3B_	LTR/ERVK	1	499	(0)	2068907
2103	25.5	9.8	9.2	chr2	108189887	108190322	(134003207)	+	L1ME3A	LINE/L1	3427	3830	(2316)	2068906
3170	5.6	5.3	0.2	chr2	108556637	108557047	(133636482)	+	LTR3B	LTR/ERVK	1	433	(4)	2069434
15	17.6	0.0	0.0	chr2	108557050	108557081	(133636448)	+	(CTTC)n	Simple_repeat	1	32	(0)	2069435
2056	14.8	0.4	0.0	chr2	108557099	108557376	(133636153)	C	AluJo	SINE/Alu	(33)	279	1	2069436
3111	12.1	0.9	1.4	chr2	113601977	113602680	(128590849)	+	TAR1	Satellite/telo	1	700	(1434)	2077035
136	13.6	0.4	2.4	chr2	113602682	113602928	(128590601)	+	G-rich	Low_complexity	1	248	(0)	2077036
329	8.5	1.5	3.4	chr2	113602929	113603477	(128590052)	+	(CTAACC)n	Simple_repeat	1	557	(0)	2077037
5958	3.6	0.4	0.6	chr2	113603478	113604530	(128588999)	C	TAR1	Satellite/telo	(316)	1050	1	2077038
136	9.4	1.2	4.7	chr2	113624519	113624769	(128568760)	+	(ACCCTA)n	Simple_repeat	1	254	(0)	2077066
114	11.6	8.1	1.1	chr2	131803261	131803518	(110390011)	+	G-rich	Low_complexity	1	279	(0)	2103747
3068	8.2	0.2	0.9	chr2	131803519	131803963	(110389566)	C	L1PB	LINE/L1	(927)	5219	4778	2103748
5008	8.7	0.4	0.9	chr2	131811985	131812728	(110380801)	+	L1PBa	LINE/L1	5196	5935	(927)	2103751
122	13.9	0.3	7.4	chr2	131812729	131813025	(110380504)	+	(CCCTAA)n	Simple_repeat	1	276	(0)	2103754
627	21.9	0.0	0.0	chr2	132288117	132288372	(109905157)	C	ACRO1	Satellite/acro	(38)	256	1	2104359
447	28.3	9.1	2.2	chr2	152771246	152771429	(89422100)	+	CR1_Mam	LINE/CR1	1474	1671	(533)	2132909
978	16.4	1.7	1.7	chr2	152771581	152771597	(89421932)	C	MER2	DNA/TcMar-Tigger	(31)	314	300	2132910
31	0.0	0.0	0.0	chr2	152771598	152771626	(89421903)	+	(CCCCAA)n	Simple_repeat	1	29	(0)	2132911
978	16.4	1.7	1.7	chr2	152771627	152771782	(89421747)	C	MER2	DNA/TcMar-Tigger	(46)	299	141	2132910
804	25.0	5.9	1.9	chr2	161280161	161280465	(80913064)	C	MER21B	LTR/ERVL	(132)	799	484	2144207
849	18.7	7.8	0.0	chr2	161280449	161280614	(80912915)	C	MER21B	LTR/ERVL	(489)	379	200	2144207
76	0.0	0.0	0.0	chr2	181275792	181275858	(60917671)	+	(CTAACC)n	Simple_repeat	1	67	(0)	2172531
743	29.2	5.7	2.2	chr2	181275860	181276129	(60917400)	+	MLT2F	LTR/ERVL	76	355	(308)	2172532
1628	25.4	6.5	5.5	chr2	240220699	240221870	(1971659)	C	L1ME2z	LINE/L1	(1667)	4479	3631	2259826
38	0.0	0.0	0.0	chr2	240221871	240221905	(1971624)	+	(GTTAGG)n	Simple_repeat	1	35	(0)	2259827
1530	26.5	6.6	3.5	chr2	240221906	240222446	(1971083)	C	L1ME2z	LINE/L1	(2516)	3630	3012	2259826
133	36.8	2.8	2.3	chr2	240613454	240614355	(1579174)	+	(CCTAAT)n	Simple_repeat	1	927	(0)	2260213
15	20.0	2.0	3.9	chr2	240614394	240614443	(1579086)	+	(ACCTTC)n	Simple_repeat	1	51	(0)	2260214
11301	0.4	16.2	0.0	chr2	242181833	242183303	(10226)	+	TAR1	Satellite/telo	314	2069	(42)	2262199
143	9.2	0.4	1.3	chr2	242183304	242183529	(10000)	+	(AGGGTT)n	Simple_repeat	1	227	(0)	2262200
411	24.8	0.0	9.9	chr20	29411577	29411728	(35032439)	+	LSAU	Satellite	2	138	(360)	2304090
2860	28.3	4.9	5.5	chr20	30283322	30285229	(34158938)	+	SST1	Satellite/centr	1	1895	(14)	2304820
1159	13.1	0.5	0.0	chr20	30519545	30520660	(33923507)	C	ACRO1	Satellite/acro	(55)	1121	1	2305115
1030	9.4	0.8	0.0	chr20	30866424	30866600	(33577567)	+	BSR/Beta	Satellite	1	178	(0)	2305529
576	23.4	6.1	1.9	chr20	30866632	30866788	(33577379)	+	MIRb	SINE/MIR	33	196	(72)	2305530
292	30.0	6.0	14.6	chr20	30866792	30866903	(33577264)	C	MLT1I	LTR/ERVL-MaLR	(0)	411	324	2305531
15	4.8	0.0	0.0	chr20	34216182	34216203	(30227964)	+	(GCAA)n	Simple_repeat	1	22	(0)	2312528
14	5.0	0.0	0.0	chr20	34216252	34216272	(30227895)	+	(CGC)n	Simple_repeat	1	21	(0)	2312529
1616	25.4	9.5	0.5	chr20	34216376	34216932	(30227235)	C	L1MEg	LINE/L1	(925)	5221	4610	2312530
12	30.6	1.9	0.0	chr20	37406830	37406881	(27037286)	+	(TCTC)n	Simple_repeat	1	53	(0)	2319959
603	17.4	4.3	5.8	chr20	37406909	37407085	(27037082)	C	L1PB3	LINE/L1	(0)	6156	5990	2319960
24	24.0	7.4	1.5	chr20	37407086	37407136	(27037031)	+	(TTTCTC)n	Simple_repeat	1	54	(0)	2319961
1636	15.7	4.5	1.8	chr20	37407137	37407416	(27036751)	C	AluJb	SINE/Alu	(23)	289	2	2319962
125	14.9	0.0	0.5	chr20	45313250	45313465	(19130702)	+	(CTAACC)n	Simple_repeat	1	216	(0)	2335368
347	30.3	14.0	1.7	chr20	45313619	45313799	(19130368)	C	MIRb	SINE/MIR	(39)	229	23	2335369
2508	17.7	4.2	1.4	chr20	64285514	64286699	(157468)	+	TAR1	Satellite/telo	1	1219	(1436)	2370665
605	6.4	0.9	3.6	chr20	64286700	64287633	(156534)	+	(AGGGTT)n	Simple_repeat	1	942	(0)	2370666
5387	18.9	1.4	1.3	chr21	7915871	7944657	(38765326)	+	(ATTCCATTCC)n	Simple_repeat	1	29177	(0)	2373120
880	13.0	0.0	0.0	chr21	8239093	8239215	(38470768)	C	AluSx3	SINE/Alu	(9)	302	180	2373343
47	0.0	0.0	0.0	chr21	8239234	8239276	(38470707)	+	(T)n	Simple_repeat	1	43	(0)	2373344
312	38.2	6.5	3.6	chr21	8419786	8420171	(38289812)	C	HAL1	LINE/L1	(1230)	1277	880	2373573
248	25.0	0.5	0.3	chr21	8420172	8420439	(38289544)	+	(TCTC)n	Simple_repeat	1	268	(0)	2373574
46	2.3	0.0	0.0	chr21	8420440	8420483	(38289500)	+	(GT)n	Simple_repeat	1	44	(0)	2373575
248	25.0	0.5	0.3	chr21	8420484	8420826	(38289157)	+	(TCTC)n	Simple_repeat	1	344	(0)	2373576
12	20.8	0.0	2.9	chr21	8434102	8434136	(38275847)	+	(CCG)n	Simple_repeat	1	35	(0)	2373611
25399	0.2	1.5	0.8	chr21	8441146	8441992	(38267991)	+	LSU-rRNA_Hsa	rRNA	1	877	(4158)	2373624
27358	0.2	1.1	0.8	chr21	8442037	8446211	(38263772)	+	LSU-rRNA_Hsa	rRNA	878	5035	(0)	2373624
1644	21.1	0.0	0.0	chr21	8451875	8452163	(38257820)	+	AluSz	SINE/Alu	1	289	(23)	2373651
529	18.9	6.8	3.1	chr21	8452179	8452305	(38257678)	+	AluJb	SINE/Alu	130	261	(51)	2373652
819	26.5	0.0	6.3	chr21	8453826	8454095	(38255888)	+	L1PREC2	LINE/L1	5900	6152	(8)	2373663
51	4.3	4.2	0.0	chr21	8454102	8454172	(38255811)	+	(GA)n	Simple_repeat	1	74	(0)	2373664
560	22.7	0.5	0.2	chr21	8465065	8465409	(38244574)	+	(CTCT)n	Simple_repeat	2	347	(0)	2373688
1263	30.4	12.1	1.4	chr21	9257066	9257711	(37452272)	C	L2	LINE/L2	(1779)	1640	916	2374355
1562	29.8	5.6	6.5	chr21	9817901	9819192	(36890791)	C	SST1	Satellite/centr	(1)	1562	284	2374896
20	28.0	1.7	0.0	chr21	9819212	9819271	(36890712)	+	GA-rich	Low_complexity	1	61	(0)	2374897
1996	29.3	5.0	5.8	chr21	9819321	9820600	(36889383)	C	SST1	Satellite/centr	(11)	1552	284	2374899
1750	28.6	6.0	7.2	chr21	9822132	9823427	(36886556)	C	SST1	Satellite/centr	(1)	1562	284	2374905
1523	28.6	6.2	6.9	chr21	9836200	9837509	(36872474)	C	SST1	Satellite/centr	(1)	1562	262	2374935
404	28.3	11.0	2.7	chr21	10427070	10427382	(36282601)	C	L2c	LINE/L2	(213)	3174	2827	2375541
25	15.4	0.0	0.0	chr21	10427515	10427557	(36282426)	+	(CA)n	Simple_repeat	1	43	(0)	2375542
251	29.8	3.8	9.2	chr21	34712445	34712640	(11997343)	+	L1M7	LINE/L1	348	532	(5779)	2407053
64	5.6	0.0	0.0	chr21	34712848	34712922	(11997061)	+	(CCCTAA)n	Simple_repeat	1	75	(0)	2407054
382	33.6	2.8	10.5	chr21	34713138	34713489	(11996494)	+	HAL1b	LINE/L1	747	1070	(1351)	2407055
2426	8.5	0.3	2.5	chr21	42714000	42714316	(3995667)	C	AluY	SINE/Alu	(1)	310	1	2419217
568	23.3	3.2	1.4	chr21	42714978	42715190	(3994793)	C	L1M4a2	LINE/L1	(119)	2537	2321	2419218
533	18.9	2.6	0.0	chr21	46134216	46134326	(575657)	C	MLT1C	LTR/ERVL-MaLR	(308)	159	46	2423538
207	12.0	0.0	1.3	chr21	46134351	46134739	(575244)	+	(GGGTCA)n	Simple_repeat	1	389	(0)	2423539
1081	7.7	0.8	0.0	chr22	11572347	11572523	(39245945)	+	BSR/Beta	Satellite	1	178	(0)	2425188
194	23.1	0.0	1.9	chr22	11817844	11817896	(39000572)	C	MER5A	DNA/hAT-Charlie	(20)	169	118	2425392
590	21.9	0.2	0.0	chr22	11818875	11819136	(38999332)	+	ACRO1	Satellite/acro	1	262	(0)	2425395
2046	15.2	0.0	0.0	chr22	11877779	11878081	(38940387)	C	AluSx	SINE/Alu	(4)	308	6	2425483
1249	21.0	6.5	1.2	chr22	11896731	11897053	(38921415)	C	L1MB8	LINE/L1	(5)	6173	5833	2425507
2301	14.0	7.0	0.5	chr22	11897054	11897465	(38921003)	C	MER61C	LTR/ERV1	(0)	428	4	2425508
41	8.0	0.0	0.0	chr22	12173926	12173978	(38644490)	+	(GT)n	Simple_repeat	1	53	(0)	2425781
1132	13.2	0.2	0.1	chr22	12175974	12177529	(38640939)	+	ACRO1	Satellite/acro	1	1558	(0)	2425786
79	13.2	9.4	0.5	chr22	15499799	15499999	(35318469)	+	G-rich	Low_complexity	1	220	(0)	2426442
38	6.7	4.8	0.0	chr22	15500001	15500063	(35318405)	+	(TAGGGGT)n	Simple_repeat	1	66	(0)	2426443
49	3.4	0.0	4.5	chr22	15500064	15500130	(35318338)	+	(GGGTCA)n	Simple_repeat	1	67	(0)	2426444
14189	23.7	2.0	1.3	chr22	16342959	16363362	(34455106)	+	(GGAAT)n	Simple_repeat	1	20423	(0)	2427223
18640	11.0	1.4	5.0	chr22	16402296	16403030	(34415438)	+	L1PBa	LINE/L1	5192	5935	(927)	2427280
48	20.7	0.0	8.2	chr22	16403031	16403076	(34415392)	+	(ACCCTA)n	Simple_repeat	1	44	(0)	2427282
65	6.4	0.8	6.2	chr22	16403077	16403205	(34415263)	+	(CCCTAA)n	Simple_repeat	1	130	(0)	2427283
48	20.7	0.0	8.2	chr22	16403206	16403328	(34415140)	+	(ACCCTA)n	Simple_repeat	3	114	(0)	2427284
4341	4.4	0.2	0.0	chr22	18890645	18891207	(31927261)	C	HSATI	Satellite	(10)	567	4	2431162
1756	13.1	0.4	5.5	chr22	18892363	18892653	(31925815)	C	AluSc8	SINE/Alu	(23)	288	13	2431166
4397	4.1	0.2	0.0	chr22	18892654	18893219	(31925249)	C	HSATI	Satellite	(10)	567	1	2431167
30	2.1	10.4	0.0	chr22	18893220	18893267	(31925201)	+	(AT)n	Simple_repeat	1	53	(0)	2431168
395	25.2	5.3	0.9	chr22	19570007	19570114	(31248354)	C	MIR	SINE/MIR	(49)	213	101	2432240
2583	9.9	0.0	0.0	chr22	33122346	33122658	(17695810)	C	AluSq2	SINE/Alu	(0)	313	1	2458441
6832	15.2	4.5	2.9	chr22	33122659	33123609	(17694859)	C	MER66-int	LTR/ERV1	(4512)	2164	1210	2458440
382	26.7	6.4	1.2	chr22	42865492	42865654	(7952814)	+	L1ME4a	LINE/L1	5951	6122	(2)	2479116
33	0.0	0.0	0.0	chr22	42865811	42865841	(7952627)	+	(ACCCTA)n	Simple_repeat	1	31	(0)	2479118
13	20.1	0.0	2.8	chr22	42865958	42865993	(7952475)	+	(TTCT)n	Simple_repeat	1	36	(0)	2479119
399	35.0	9.5	10.4	chr22	45752177	45752504	(5065964)	C	L2b	LINE/L2	(8)	3367	3043	2484506
41	13.6	0.0	1.3	chr22	45752537	45752611	(5065857)	+	(GGGGCT)n	Simple_repeat	1	75	(0)	2484507
258	31.0	7.4	6.0	chr22	48204594	48204800	(2613668)	+	MIR3	SINE/MIR	32	236	(32)	2487953
13	3.2	11.8	2.6	chr22	49271461	49271494	(1546974)	+	(TGAGGT)n	Simple_repeat	1	38	(0)	2489166
188	24.3	0.4	1.1	chr22	50547624	50548078	(270390)	+	(GCCCCA)n	Simple_repeat	1	457	(0)	2490844
146	9.3	1.5	3.8	chr22	50786131	50786390	(32078)	+	(GTTAGG)n	Simple_repeat	1	264	(0)	2491203
704	5.2	1.1	2.0	chr3	10001	10916	(198284643)	+	(CTAACC)n	Simple_repeat	1	926	(0)	2492347
46	0.0	0.0	0.0	chr3	10917	10983	(198284576)	+	(CGACCC)n	Simple_repeat	1	67	(0)	2492348
1559	9.5	2.2	4.3	chr3	10988	11771	(198283788)	C	TAR1	Satellite/telo	(11)	768	1	2492349
7354	9.0	4.9	4.6	chr3	50770020	50771569	(147523990)	+	L1MA1	LINE/L1	4054	5615	(687)	2573555
320	21.9	0.0	9.6	chr3	75668819	75668954	(122626605)	C	LSAU	Satellite	(374)	124	2	2614560
2022	24.9	7.4	2.6	chr3	122509827	122510827	(75784732)	+	HAL1	LINE/L1	1287	2439	(68)	2672107
272	30.4	13.2	5.0	chr3	122511183	122511362	(75784197)	+	MamSINE1	SINE/tRNA-RTE	92	288	(2)	2672110
2442	6.3	2.5	1.9	chr3	141884454	141884776	(56410783)	+	MLT2A1	LTR/ERVL	1	325	(119)	2703082
2295	13.4	0.0	0.0	chr3	142554954	142555266	(55740293)	+	AluSq2	SINE/Alu	1	313	(0)	2704297
2006	12.0	2.5	0.0	chr3	159694204	159694224	(38601335)	+	AluSq2	SINE/Alu	1	21	(292)	2728583
40	2.5	0.0	0.0	chr3	159694225	159694265	(38601294)	+	(CCTAAC)n	Simple_repeat	1	41	(0)	2728584
2006	12.0	2.5	0.0	chr3	159694266	159694517	(38601042)	+	AluSq2	SINE/Alu	29	281	(32)	2728583
1040	9.8	0.3	4.7	chr3	198172702	198174527	(121032)	+	(AGGGTT)n	Simple_repeat	1	1831	(0)	2788213
205	0.5	1.0	1.0	chr4	10001	10197	(190204358)	+	(ACCCTA)n	Simple_repeat	1	199	(0)	2788519
4151	15.9	5.9	18.2	chr4	10199	12822	(190201733)	C	TAR1	Satellite/telo	(238)	2302	1	2788520
386	33.1	8.2	7.5	chr4	6423504	6423809	(183790746)	C	L2a	LINE/L2	(70)	3356	3038	2798350
33	2.9	0.0	0.0	chr4	6423901	6423935	(183790620)	+	(GTTAGG)n	Simple_repeat	1	35	(0)	2798352
35	2.4	2.2	2.2	chr4	8347358	8347402	(181867153)	+	(GGTTAG)n	Simple_repeat	1	46	(0)	2801641
15	14.2	10.6	0.0	chr4	26860767	26860813	(163353742)	+	(GCG)n	Simple_repeat	1	52	(0)	2831734
16	0.0	0.0	0.0	chr4	26860925	26860942	(163353613)	+	(T)n	Simple_repeat	1	18	(0)	2831735
26	23.2	0.0	4.8	chr4	26861040	26861122	(163353433)	+	(GGC)n	Simple_repeat	1	83	(0)	2831736
13	17.3	3.9	5.7	chr4	26861187	26861237	(163353318)	+	(GCTGC)n	Simple_repeat	1	53	(0)	2831737
8169	13.3	1.8	1.9	chr4	49091249	49112662	(141101893)	+	(CATTC)n	Satellite	1	21808	(0)	2864888
16752	13.3	2.1	2.0	chr4	49110670	49156598	(141057957)	+	(TCCAT)n	Simple_repeat	1	46892	(0)	2864889
856	23.7	6.6	0.8	chr4	49313978	49314438	(140900117)	C	MER21B	LTR/ERVL	(132)	799	200	2865114
1094	12.9	0.2	0.0	chr4	49322499	49324803	(140889752)	+	ACRO1	Satellite/acro	1	2308	(0)	2865130
609	21.6	8.5	3.0	chr4	77156265	77156464	(113058091)	C	L1MC5a	LINE/L1	(2)	2775	2564	2900479
398	23.5	0.7	2.2	chr4	190022652	190022790	(191765)	+	LSAU	Satellite	2	138	(360)	3054526
1095	9.4	0.3	0.6	chr4	190175762	190180287	(34268)	+	BSR/Beta	Satellite	1	4511	(8)	3054651
1095	10.4	0.7	0.9	chr4	190180974	190182175	(32380)	+	BSR/Beta	Satellite	1	1199	(0)	3054653
136	10.0	0.3	2.0	chr4	190182179	190182322	(32233)	+	(AGGGTT)n	Simple_repeat	1	143	(0)	3054654
2125	0.2	0.0	0.3	chr5	10001	11835	(181526424)	+	(TAACCC)n	Simple_repeat	1	1835	(0)	3054965
29	2.6	0.0	2.4	chr5	11838	11879	(181526380)	+	(GACCCC)n	Simple_repeat	1	42	(0)	3054966
7973	10.4	3.5	1.2	chr5	11943	13334	(181524925)	C	TAR1	Satellite/telo	(43)	2068	644	3054967
138	9.1	0.0	4.5	chr5	49522	49789	(181488470)	+	(GGGTCA)n	Simple_repeat	1	268	(0)	3055013
245	22.4	0.9	3.0	chr5	50041	50689	(181487570)	+	(CTAACC)n	Simple_repeat	1	655	(0)	3055014
38	0.0	1.9	5.7	chr5	1154176	1154227	(180384032)	+	(CCCTAA)n	Simple_repeat	1	53	(0)	3055988
57	15.7	3.0	2.9	chr5	1154355	1154555	(180383704)	+	(AC)n	Simple_repeat	1	201	(0)	3055989
504	22.2	1.7	0.0	chr5	2184710	2184826	(179353433)	+	HY1	scRNA	1	119	(0)	3057026
97	5.6	1.0	7.1	chr5	2185011	2185205	(179353054)	+	(GGGTTA)n	Simple_repeat	1	197	(0)	3057027
15381	12.1	2.9	3.3	chr5	10241737	10243203	(171295056)	C	Tigger1	DNA/TcMar-Tigger	(0)	2418	968	3066540
36	0.0	2.4	2.4	chr5	16348083	16348123	(165190136)	+	(GTTAGG)n	Simple_repeat	1	42	(0)	3074859
387	18.1	10.5	1.1	chr5	58754067	58754161	(122784098)	+	Tigger15a	DNA/TcMar-Tigger	544	648	(67)	3128549
3368	21.5	7.4	3.5	chr5	75750767	75751800	(105786459)	+	L1MD2	LINE/L1	5265	6344	(15)	3154037
2429	6.3	0.0	3.6	chr5	83515951	83516119	(98022140)	+	AluYj4	SINE/Alu	1	168	(143)	3166064
35	5.1	0.0	0.0	chr5	83516120	83516160	(98022099)	+	(CCCTAA)n	Simple_repeat	1	41	(0)	3166065
2429	6.3	0.0	3.6	chr5	83516161	83516294	(98021965)	+	AluYj4	SINE/Alu	169	292	(19)	3166064
2445	28.8	6.8	15.6	chr5	95382558	95383279	(86154980)	C	L2a	LINE/L2	(1495)	1924	1179	3181080
315	15.3	5.3	4.0	chr5	96965133	96965207	(84573052)	+	L1MA4	LINE/L1	6031	6106	(194)	3183411
1211	29.1	8.1	4.5	chr5	96965218	96965797	(84572462)	C	Tigger13a	DNA/TcMar-Tigger	(166)	605	3	3183412
1675	12.5	0.9	0.4	chr5	106535533	106535764	(75002495)	C	AluSc	SINE/Alu	(27)	282	50	3195261
27	0.0	0.0	0.0	chr5	133942907	133942932	(47595327)	+	(GGTTGG)n	Simple_repeat	1	26	(0)	3231625
904	30.1	9.5	0.9	chr5	154039154	154039664	(27498595)	C	L2b	LINE/L2	(5)	3370	2791	3266299
615	26.2	13.0	7.1	chr5	178585739	178586104	(2952155)	+	MLT1L	LTR/ERVL-MaLR	3	393	(217)	3309445
230	4.5	1.1	4.8	chr6	147636	147986	(170657993)	+	(CTAACC)n	Simple_repeat	1	355	(0)	3314431
2053	19.6	3.8	1.5	chr6	147987	149049	(170656930)	C	TAR1	Satellite/telo	(237)	1087	1	3314432
1140	26.5	8.4	1.8	chr6	1020382	1020780	(169785199)	C	ERV3-16A3_I-int	LTR/ERVL	(48)	5178	4751	3315523
3524	27.7	8.1	4.9	chr6	1020775	1021447	(169784532)	C	ERV3-16A3_I-int	LTR/ERVL	(2256)	3398	2497	3315523
38	2.4	0.0	2.3	chr6	1114750	1114793	(169691186)	+	(CCTAAC)n	Simple_repeat	1	44	(0)	3315667
1395	16.3	6.2	1.3	chr6	13674099	13674474	(157131505)	+	L1MCa	LINE/L1	2469	2865	(3699)	3334666
3062	11.5	0.4	3.2	chr6	13674481	13674973	(157131006)	+	LTR3B_	LTR/ERVK	21	499	(0)	3334668
4466	13.8	2.2	2.2	chr6	27632581	27633162	(143172817)	C	ERVL-B4-int	LTR/ERVL	(3379)	2335	1743	3357261
3398	7.0	1.4	0.0	chr6	27633163	27633590	(143172389)	+	LTR3B	LTR/ERVK	1	434	(3)	3357262
12	31.0	0.0	4.6	chr6	28489989	28490053	(142315926)	+	G-rich	Low_complexity	1	65	(0)	3358716
30	0.0	0.0	0.0	chr6	35512014	35512041	(135293938)	+	(CCAACC)n	Simple_repeat	1	28	(0)	3370522
452	24.6	5.4	2.4	chr6	38944695	38944819	(131861160)	+	L2a	LINE/L2	3298	3426	(0)	3377250
68	5.4	0.0	0.0	chr6	38944951	38945028	(131860951)	+	(TAACCC)n	Simple_repeat	1	78	(0)	3377251
12	18.8	2.6	2.6	chr6	43575960	43575997	(127229982)	+	(GCGGCGG)n	Simple_repeat	1	39	(0)	3385604
13	18.8	4.5	2.2	chr6	79947434	79947477	(90858502)	+	(GCGGCAG)n	Simple_repeat	1	46	(0)	3431998
16	0.0	4.3	0.0	chr6	79947629	79947651	(90858328)	+	(CCCT)n	Simple_repeat	1	24	(0)	3431999
191	36.4	0.0	0.0	chr6	103175703	103175757	(67630222)	+	L2a	LINE/L2	3360	3414	(12)	3462419
2853	27.3	12.8	2.9	chr6	121077025	121078224	(49727755)	+	L2	LINE/L2	718	2053	(1366)	3488531
548	18.5	1.8	0.0	chr6	136334220	136334327	(34471652)	C	MLT1C	LTR/ERVL-MaLR	(4)	463	354	3509724
4770	10.4	2.4	3.9	chr6	136334328	136335133	(34470846)	+	LTR1A2	LTR/ERV1	44	837	(0)	3509725
3661	23.5	6.7	5.7	chr6	136878625	136880171	(33925808)	C	L1MC4	LINE/L1	(3862)	2353	790	3510625
2230	12.5	0.0	0.7	chr6	143213489	143213816	(27592163)	C	AluSx1	SINE/Alu	(0)	312	1	3519542
249	37.2	4.7	3.2	chr6	155710197	155710321	(15095658)	C	MER5B	DNA/hAT-Charlie	(51)	127	1	3538482
26	9.9	5.4	1.7	chr6	159693321	159693376	(11112603)	+	(CCGCC)n	Simple_repeat	1	59	(0)	3544447
227	0.4	5.0	0.0	chr7	10001	10241	(159335732)	+	(CTAACC)n	Simple_repeat	1	253	(0)	3557857
32	0.0	0.0	0.0	chr7	173855	173884	(159172089)	+	(TTAGGG)n	Simple_repeat	1	30	(0)	3558039
36	18.1	2.5	0.0	chr7	1756257	1756337	(157589636)	+	(AACCCT)n	Simple_repeat	1	83	(0)	3560428
42	8.4	4.0	0.0	chr7	1756388	1756463	(157589510)	+	(CCTAAC)n	Simple_repeat	1	79	(0)	3560429
2468	9.6	0.0	0.0	chr7	1756546	1756858	(157589115)	C	AluSq2	SINE/Alu	(0)	313	1	3560430
20	30.8	3.2	1.0	chr7	35801370	35801462	(123544511)	+	(GGC)n	Simple_repeat	1	96	(0)	3611239
94	10.7	1.1	1.1	chr7	57495470	57495644	(101850329)	+	(GGAAT)n	Simple_repeat	1	177	(0)	3642547
26	5.1	6.0	4.2	chr7	58104610	58104676	(101241297)	+	(GATTCCATTC)n	Simple_repeat	1	71	(0)	3643241
288	23.1	1.2	1.9	chr7	65488938	65489682	(93856291)	+	(ATTCC)n	Simple_repeat	1	754	(0)	3647900
351	16.1	3.1	0.0	chr7	65489683	65489744	(93856229)	C	AluYj4	SINE/Alu	(22)	289	226	3647901
311	26.7	1.3	0.0	chr7	67937696	67937770	(91408203)	+	L1M6	LINE/L1	1693	1768	(4728)	3653332
3655	8.9	0.6	0.8	chr7	67937973	67938469	(91407504)	+	LTR3B_	LTR/ERVK	1	496	(3)	3653333
27	0.0	0.0	0.0	chr7	77537106	77537131	(81808842)	+	(GCGGCT)n	Simple_repeat	1	26	(0)	3673970
13	23.8	0.0	2.1	chr7	77537132	77537169	(81808804)	+	G-rich	Low_complexity	8	45	(0)	3673971
34	0.0	0.0	0.0	chr7	77537204	77537234	(81808739)	+	(GGC)n	Simple_repeat	1	31	(0)	3673972
12	13.7	0.0	0.0	chr7	77537368	77537391	(81808582)	+	(GCC)n	Simple_repeat	1	24	(0)	3673973
627	36.8	3.2	7.2	chr7	85607144	85607626	(73738347)	+	L1MEd	LINE/L1	16	478	(6608)	3684998
31	0.0	0.0	0.0	chr7	106101439	106101467	(53244506)	+	(C)n	Simple_repeat	1	29	(0)	3717099
587	27.3	8.8	1.7	chr7	128454161	128454339	(30891634)	C	MIR	SINE/MIR	(1)	261	69	3747270
815	25.1	10.7	7.8	chr7	152897867	152897978	(6447995)	+	LTR16A	LTR/ERVL	2	138	(313)	3786160
59	0.0	0.0	0.0	chr7	152897979	152898031	(6447942)	+	(AACCCT)n	Simple_repeat	1	53	(0)	3786161
815	25.1	10.7	7.8	chr7	152898032	152898342	(6447631)	+	LTR16A	LTR/ERVL	139	438	(13)	3786160
401	27.9	6.1	7.5	chr7	153083250	153083561	(6262412)	C	LTR105_Mam	LTR/ERVL	(210)	390	32	3786490
236	36.4	0.4	0.5	chr7	158595098	158595342	(750631)	+	(GGTGGT)n	Simple_repeat	4	246	(0)	3793408
154	26.5	3.1	0.4	chr7	159013200	159013649	(332324)	+	G-rich	Low_complexity	1	464	(0)	3794006
78	27.4	0.0	0.9	chr7	159294692	159294909	(51064)	+	(GTTAGG)n	Simple_repeat	1	218	(0)	3794293
2278	19.5	0.8	1.9	chr7	159335248	159335741	(10232)	+	TAR1	Satellite/telo	1	488	(313)	3794336
106	0.0	0.0	2.8	chr7	159335868	159335973	(10000)	+	(GTTAGG)n	Simple_repeat	1	106	(0)	3794337
281	6.6	1.4	4.3	chr8	205252	205736	(144932900)	+	(TAACCC)n	Simple_repeat	1	492	(0)	3794561
5249	18.3	11.3	2.1	chr8	205741	207331	(144931305)	C	TAR1	Satellite/telo	(43)	2068	314	3794562
12	16.6	4.5	4.3	chr8	220376	220419	(144918217)	+	(ATTAGTA)n	Simple_repeat	1	46	(0)	3794582
105	2.2	6.6	0.0	chr8	220441	220577	(144918059)	+	(CCCTAAC)n	Simple_repeat	1	146	(0)	3794583
1723	20.7	0.0	0.0	chr8	220595	220893	(144917743)	+	AluSz6	SINE/Alu	3	301	(11)	3794584
1574	27.8	4.4	3.6	chr8	57205915	57206586	(87932050)	C	MER50	LTR/ERV1	(29)	705	28	3874990
2155	21.6	10.2	2.4	chr8	57209256	57210098	(87928538)	C	MER50-int	LTR/ERV1	(5568)	1637	729	3874991
1080	24.1	1.3	2.5	chr8	57210109	57210427	(87928209)	C	MER50	LTR/ERV1	(134)	600	286	3874991
828	29.3	5.5	3.9	chr8	57210498	57210965	(87927671)	C	MER50	LTR/ERV1	(231)	503	28	3874994
12	13.7	0.0	0.0	chr8	66177114	66177137	(78961499)	+	(GCA)n	Simple_repeat	1	24	(0)	3886967
17	19.9	2.1	2.0	chr8	66177289	66177336	(78961300)	+	(CGGCTG)n	Simple_repeat	1	49	(0)	3886968
1691	21.6	10.2	0.2	chr8	79063800	79063949	(66074687)	C	MLT1C	LTR/ERVL-MaLR	(261)	206	30	3905453
255	25.0	0.0	0.0	chr8	79063981	79064036	(66074600)	C	MIRb	SINE/MIR	(45)	223	168	3905462
554	24.5	3.1	0.0	chr8	79064061	79064215	(66074421)	C	MER5A1	DNA/hAT-Charlie	(6)	160	1	3905463
3840	15.9	9.0	2.7	chr8	80704372	80705152	(64433484)	+	MER21B	LTR/ERVL	1	835	(33)	3908254
9953	10.6	0.1	0.7	chr8	85742400	85743923	(59394713)	C	L1P1	LINE/L1	(2125)	4021	2507	3914963
214	26.8	15.2	5.1	chr8	94719427	94719544	(50419092)	+	MIR3	SINE/MIR	18	149	(59)	3927427
13	28.3	5.4	1.3	chr8	94720070	94720143	(50418493)	+	(GGCGGT)n	Simple_repeat	1	78	(0)	3927428
3183	15.2	5.6	1.8	chr8	98309809	98310356	(46828280)	C	LTR39	LTR/ERV1	(0)	783	214	3933497
253	10.5	0.0	0.0	chr8	143669666	143669703	(1468933)	C	LTR10B1	LTR/ERV1	(509)	38	1	4006487
1387	25.7	7.0	3.4	chr8	144125268	144125631	(1013005)	+	L1MC4	LINE/L1	7167	7535	(507)	4007142
3202	24.7	8.7	2.4	chr8	145075166	145076120	(62516)	C	L1PA6	LINE/L1	(5954)	1027	7	4008484
275	5.4	2.1	3.6	chr9	10001	10433	(138384284)	+	(TAACCC)n	Simple_repeat	1	442	(0)	4008489
3831	12.7	31.0	1.2	chr9	10436	11574	(138383143)	C	TAR1	Satellite/telo	(13)	2098	469	4008490
40	0.0	0.0	0.0	chr9	2824045	2824081	(135570636)	+	(TAGGGT)n	Simple_repeat	1	37	(0)	4012710
189	29.3	10.8	0.0	chr9	2824136	2824193	(135570524)	+	L2b	LINE/L2	3306	3370	(5)	4012711
3296	8.1	0.7	0.2	chr9	31908346	31908778	(106485939)	+	LTR3B	LTR/ERVK	3	437	(0)	4052997
2202	13.2	0.3	0.0	chr9	42900022	42900323	(95494394)	+	AluSx3	SINE/Alu	2	304	(7)	4070704
2707	27.2	7.3	5.5	chr9	61855698	61856977	(76537740)	+	SST1	Satellite/centr	263	1561	(2)	4072475
15	5.6	0.0	0.0	chr9	61856982	61857000	(76537717)	+	(TG)n	Simple_repeat	1	19	(0)	4072477
23	25.6	1.7	0.0	chr9	61857000	61857059	(76537658)	+	(TC)n	Simple_repeat	1	61	(0)	4072478
1951	29.4	5.2	6.5	chr9	61857061	61858378	(76536339)	+	SST1	Satellite/centr	262	1562	(1)	4072479
2605	29.9	5.1	4.7	chr9	65388281	65390272	(73004445)	+	SST1	Satellite/centr	1	2001	(859)	4076190
38	15.3	0.0	1.4	chr9	69265047	69265120	(69129597)	+	(GTTAG)n	Simple_repeat	1	74	(0)	4081335
65	1.5	0.0	2.8	chr9	69265238	69265308	(69129409)	+	(CCTAAC)n	Simple_repeat	1	71	(0)	4081336
2671	14.0	6.3	2.4	chr9	69265436	69266071	(69128646)	C	MER4CL34	LTR/ERV1	(24)	741	1	4081337
42	0.0	0.0	0.0	chr9	128154271	128154308	(10240409)	+	(TAGGGT)n	Simple_repeat	1	38	(0)	4179848
2350	10.7	0.3	0.0	chr9	138128711	138129020	(265697)	C	AluSx1	SINE/Alu	(1)	311	1	4196559
86	10.1	0.7	2.1	chr9	138129062	138129204	(265513)	+	(GTTAGG)n	Simple_repeat	1	144	(0)	4196560
755	15.9	0.0	0.0	chr9	138129205	138129317	(265400)	+	AluSx3	SINE/Alu	182	294	(17)	4196561
87	25.8	0.6	4.8	chr9	138159704	138160014	(234703)	+	G-rich	Low_complexity	1	313	(0)	4196624
7960	17.4	9.3	1.4	chr9	138160015	138160914	(233803)	+	L1MA2	LINE/L1	1591	2569	(4996)	4196625
29	6.0	1.7	5.1	chrX	24398123	24398180	(131642715)	+	(GGGTTA)n	Simple_repeat	1	59	(0)	4399436
62	25.6	2.0	4.7	chrX	24398195	24398442	(131642453)	+	(GTTAGG)n	Simple_repeat	1	253	(0)	4399437
603	28.2	18.5	2.7	chrX	44271727	44272138	(111768757)	C	L3	LINE/CR1	(149)	3950	3459	4428542
19	0.0	0.0	0.0	chrX	48911419	48911439	(107129456)	+	(CA)n	Simple_repeat	1	21	(0)	4437078
17	31.1	0.0	0.0	chrX	51005971	51006027	(105034868)	+	(CCCTAA)n	Simple_repeat	1	57	(0)	4440172
32	4.7	0.0	4.2	chrX	51006044	51006091	(105034804)	+	(CTAACC)n	Simple_repeat	1	48	(0)	4440173
2694	9.1	2.3	0.8	chrX	52271339	52271716	(103769179)	C	LTR1A2	LTR/ERV1	(0)	837	454	4441659
15	21.4	4.4	0.0	chrX	73944061	73944105	(82096790)	+	A-rich	Low_complexity	1	47	(0)	4464970
30	12.2	4.8	0.0	chrX	73944168	73944229	(82096666)	+	(ACGGCA)n	Simple_repeat	1	65	(0)	4464971
101	7.4	0.0	0.0	chrX	101494011	101494139	(54546756)	+	(GGGGCT)n	Simple_repeat	1	129	(0)	4496120
11	24.7	2.2	2.2	chrX	123563072	123563116	(32477779)	+	(AACCCT)n	Simple_repeat	1	46	(0)	4526943
28	9.5	0.0	0.0	chrY	10666839	10666883	(46560532)	+	(CACTC)n	Simple_repeat	1	45	(0)	4587932
276	18.9	3.6	0.0	chrY	10994485	10994537	(46232878)	C	AluJo	SINE/Alu	(24)	288	234	4588623
45	0.0	0.0	0.0	chrY	11000012	11000052	(46227363)	+	(TCCAT)n	Simple_repeat	1	41	(0)	4588638